Your job contains 1 sequence.
>038610
MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTK
TENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRIL
RRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLE
QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAG
GWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVA
LTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGR
HTLAIVEWQTEESK
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038610
(374 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2076889 - symbol:AT3G02510 "AT3G02510" species... 1663 4.4e-171 1
TAIR|locus:2146142 - symbol:AT5G16040 "AT5G16040" species... 1645 3.6e-169 1
TAIR|locus:2163986 - symbol:UVR8 "UVB-RESISTANCE 8" speci... 468 1.9e-44 1
UNIPROTKB|E1C4H7 - symbol:HERC1 "Uncharacterized protein"... 349 2.0e-41 2
ZFIN|ZDB-GENE-070718-6 - symbol:herc2 "hect domain and RL... 424 2.5e-39 2
UNIPROTKB|E1BW48 - symbol:HERC2 "Uncharacterized protein"... 407 2.8e-38 2
UNIPROTKB|E1C8K2 - symbol:HERC2 "Uncharacterized protein"... 407 2.8e-38 2
UNIPROTKB|E2RDC2 - symbol:HERC2 "Uncharacterized protein"... 419 4.5e-38 2
UNIPROTKB|O95714 - symbol:HERC2 "E3 ubiquitin-protein lig... 418 5.7e-38 2
UNIPROTKB|D4ACN3 - symbol:Herc2 "Protein Herc2" species:1... 419 7.1e-38 2
MGI|MGI:103234 - symbol:Herc2 "hect (homologous to the E6... 419 7.3e-38 2
UNIPROTKB|G3MX12 - symbol:HERC2 "Uncharacterized protein"... 415 8.9e-38 2
MGI|MGI:1914595 - symbol:Herc4 "hect domain and RLD 4" sp... 416 9.0e-38 1
UNIPROTKB|E1B782 - symbol:HERC2 "Uncharacterized protein"... 415 9.3e-38 2
TAIR|locus:2159295 - symbol:RUG3 "RCC1/UVR8/GEF-like 3" s... 365 1.2e-37 2
RGD|1307989 - symbol:Herc2 "HECT and RLD domain containin... 419 2.7e-37 1
UNIPROTKB|F1M560 - symbol:Herc2 "Protein Herc2" species:1... 419 2.7e-37 1
RGD|1310971 - symbol:Herc4 "HECT and RLD domain containin... 408 6.5e-37 1
UNIPROTKB|E1BAV2 - symbol:HERC4 "Uncharacterized protein"... 405 1.4e-36 1
UNIPROTKB|E2RFW5 - symbol:HERC4 "Uncharacterized protein"... 404 1.7e-36 1
UNIPROTKB|E2RFV1 - symbol:HERC4 "Uncharacterized protein"... 404 1.7e-36 1
UNIPROTKB|Q5GLZ8 - symbol:HERC4 "Probable E3 ubiquitin-pr... 401 3.6e-36 1
UNIPROTKB|F1NCH3 - symbol:HERC4 "Uncharacterized protein"... 397 9.6e-36 1
FB|FBgn0031107 - symbol:HERC2 "HECT and RLD domain contai... 404 1.5e-35 1
ZFIN|ZDB-GENE-090313-139 - symbol:herc3 "hect domain and ... 393 2.6e-35 1
MGI|MGI:1914388 - symbol:Herc6 "hect domain and RLD 6" sp... 386 1.3e-34 1
UNIPROTKB|F1NBC5 - symbol:HERC3 "Uncharacterized protein"... 383 3.0e-34 1
UNIPROTKB|E1C514 - symbol:HERC3 "Uncharacterized protein"... 382 3.9e-34 1
UNIPROTKB|F1PBB3 - symbol:HERC6 "Uncharacterized protein"... 381 4.7e-34 1
UNIPROTKB|F1LPM8 - symbol:Herc6 "Protein Herc6" species:1... 380 6.2e-34 1
UNIPROTKB|F1RW66 - symbol:HERC3 "Uncharacterized protein"... 380 6.4e-34 1
RGD|1307803 - symbol:Herc3 "HECT and RLD domain containin... 377 9.9e-34 1
UNIPROTKB|E2RMB0 - symbol:HERC3 "Uncharacterized protein"... 378 1.0e-33 1
RGD|1561739 - symbol:Herc6 "HECT and RLD domain containin... 377 1.3e-33 1
UNIPROTKB|A2VDP7 - symbol:HERC3 "HERC3 protein" species:9... 375 2.2e-33 1
UNIPROTKB|Q15034 - symbol:HERC3 "Probable E3 ubiquitin-pr... 375 2.2e-33 1
FB|FBgn0035207 - symbol:CG9153 species:7227 "Drosophila m... 374 2.8e-33 1
TAIR|locus:2076532 - symbol:AT3G02300 "AT3G02300" species... 324 3.0e-33 2
UNIPROTKB|F1N7C1 - symbol:HERC6 "Uncharacterized protein"... 371 5.5e-33 1
UNIPROTKB|Q8IVU3 - symbol:HERC6 "Probable E3 ubiquitin-pr... 370 7.1e-33 1
RGD|1306366 - symbol:Herc1 "HECT and RLD domain containin... 344 6.0e-32 2
UNIPROTKB|Q74DR4 - symbol:GSU1251 "ATS1 domain repeat pro... 365 7.4e-32 1
TIGR_CMR|GSU_1251 - symbol:GSU_1251 "BNR repeat domain pr... 365 7.4e-32 1
WB|WBGene00021685 - symbol:herc-1 species:6239 "Caenorhab... 354 3.7e-31 1
UNIPROTKB|Q9BL11 - symbol:herc-1 "Protein HERC-1" species... 354 3.7e-31 1
UNIPROTKB|Q74AS9 - symbol:GSU2272 "ATS1 domain repeat lip... 304 3.8e-31 2
TIGR_CMR|GSU_2272 - symbol:GSU_2272 "lipoprotein, putativ... 304 3.8e-31 2
MGI|MGI:1344037 - symbol:Rpgr "retinitis pigmentosa GTPas... 307 5.4e-31 2
UNIPROTKB|Q15751 - symbol:HERC1 "Probable E3 ubiquitin-pr... 348 7.8e-31 2
UNIPROTKB|F1MNS0 - symbol:HERC1 "Uncharacterized protein"... 347 9.9e-31 2
UNIPROTKB|F1S098 - symbol:HERC1 "Uncharacterized protein"... 347 9.9e-31 2
TAIR|locus:2092190 - symbol:AT3G26100 species:3702 "Arabi... 281 1.1e-30 2
UNIPROTKB|E2QYQ5 - symbol:HERC1 "Uncharacterized protein"... 335 1.1e-29 2
TAIR|locus:2099986 - symbol:AT3G55580 species:3702 "Arabi... 269 1.6e-29 3
ZFIN|ZDB-GENE-030131-7951 - symbol:rcbtb1 "regulator of c... 330 2.0e-29 1
UNIPROTKB|J9NWD8 - symbol:HERC1 "Uncharacterized protein"... 335 2.0e-29 2
UNIPROTKB|Q9N1T2 - symbol:RPGR "X-linked retinitis pigmen... 337 2.3e-29 1
UNIPROTKB|F1NUG6 - symbol:Gga.50841 "Uncharacterized prot... 324 2.9e-28 1
UNIPROTKB|E1BVG2 - symbol:RCBTB1 "Uncharacterized protein... 318 4.4e-28 1
MGI|MGI:1351630 - symbol:Sergef "secretion regulating gua... 312 7.9e-28 1
UNIPROTKB|O95199 - symbol:RCBTB2 "RCC1 and BTB domain-con... 316 8.8e-28 1
MGI|MGI:1918580 - symbol:Rcbtb1 "regulator of chromosome ... 315 9.6e-28 1
UNIPROTKB|Q9UII4 - symbol:HERC5 "E3 ISG15--protein ligase... 321 1.3e-27 1
MGI|MGI:1917200 - symbol:Rcbtb2 "regulator of chromosome ... 314 1.5e-27 1
RGD|1308467 - symbol:Rcbtb1 "regulator of chromosome cond... 312 2.1e-27 1
ZFIN|ZDB-GENE-081015-2 - symbol:rpgrb "retinitis pigmento... 320 2.7e-27 1
ZFIN|ZDB-GENE-090311-16 - symbol:si:ch211-281g13.4 "si:ch... 313 8.4e-27 1
UNIPROTKB|I3LCV3 - symbol:RCBTB1 "Uncharacterized protein... 304 2.0e-26 1
UNIPROTKB|Q8NDN9 - symbol:RCBTB1 "RCC1 and BTB domain-con... 303 2.1e-26 1
UNIPROTKB|F1PV11 - symbol:RCBTB1 "Uncharacterized protein... 303 2.1e-26 1
ZFIN|ZDB-GENE-090311-56 - symbol:si:ch73-190m4.1 "si:ch73... 308 2.9e-26 1
RGD|1563497 - symbol:Sergef "secretion regulating guanine... 296 3.2e-26 1
UNIPROTKB|E1BKF7 - symbol:RCBTB1 "Uncharacterized protein... 301 3.4e-26 1
TAIR|locus:504956339 - symbol:RUG1 "AT5G08710" species:37... 295 4.1e-26 1
UNIPROTKB|F1N1N9 - symbol:HERC5 "Uncharacterized protein"... 305 5.8e-26 1
UNIPROTKB|Q92834 - symbol:RPGR "X-linked retinitis pigmen... 303 1.1e-25 1
TAIR|locus:505006603 - symbol:AT5G12350 "AT5G12350" speci... 302 1.5e-25 1
UNIPROTKB|Q9UGK8 - symbol:SERGEF "Secretion-regulating gu... 292 1.6e-25 1
UNIPROTKB|F1PB99 - symbol:HERC5 "Uncharacterized protein"... 301 1.7e-25 1
DICTYBASE|DDB_G0278255 - symbol:DDB_G0278255 "regulator o... 254 3.4e-25 2
ZFIN|ZDB-GENE-070615-14 - symbol:zgc:163136 "zgc:163136" ... 296 5.7e-25 1
TAIR|locus:2205794 - symbol:AT1G27060 species:3702 "Arabi... 283 7.6e-25 1
ZFIN|ZDB-GENE-040426-2216 - symbol:rcc1 "regulator of chr... 283 7.7e-25 1
ZFIN|ZDB-GENE-070912-423 - symbol:rpgra "retinitis pigmen... 297 9.7e-25 1
ZFIN|ZDB-GENE-090311-7 - symbol:si:ch211-281g13.5 "si:ch2... 293 1.2e-24 1
UNIPROTKB|Q3MHW0 - symbol:SERGEF "Secretion-regulating gu... 284 1.4e-24 1
UNIPROTKB|F1P3N0 - symbol:WBSCR16 "Uncharacterized protei... 283 1.6e-24 1
UNIPROTKB|E1BIS5 - symbol:WBSCR16 "Uncharacterized protei... 282 2.3e-24 1
DICTYBASE|DDB_G0269934 - symbol:DDB_G0269934 "Ras GTPase ... 293 3.3e-24 1
ZFIN|ZDB-GENE-070402-2 - symbol:als2a "amyotrophic latera... 240 3.4e-24 2
ZFIN|ZDB-GENE-061220-11 - symbol:sergef "secretion regula... 248 4.2e-24 2
UNIPROTKB|G3V1B4 - symbol:SERGEF "Secretion-regulating gu... 273 8.7e-24 1
UNIPROTKB|F1S9B1 - symbol:SERGEF "Uncharacterized protein... 273 8.7e-24 1
UNIPROTKB|Q96I51 - symbol:WBSCR16 "Williams-Beuren syndro... 272 9.6e-24 2
TAIR|locus:2144291 - symbol:AT5G11580 "AT5G11580" species... 220 1.0e-23 2
TAIR|locus:2086253 - symbol:AT3G23270 "AT3G23270" species... 282 1.9e-23 1
POMBASE|SPBC557.03c - symbol:pim1 "Ran GDP/GTP exchange f... 276 2.1e-23 1
RGD|1307558 - symbol:Wbscr16 "Williams-Beuren syndrome ch... 274 3.6e-23 1
UNIPROTKB|Q5BIW4 - symbol:ALS2 "Alsin" species:9598 "Pan ... 231 8.1e-23 2
TAIR|locus:2165770 - symbol:AT5G42140 "AT5G42140" species... 275 1.1e-22 1
WARNING: Descriptions of 134 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2076889 [details] [associations]
symbol:AT3G02510 "AT3G02510" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0008536 "Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.20016
UniGene:At.41128 EMBL:AK227929 IPI:IPI00539921 RefSeq:NP_186900.3
UniGene:At.70614 ProteinModelPortal:Q0WSJ9 SMR:Q0WSJ9 PRIDE:Q0WSJ9
EnsemblPlants:AT3G02510.1 GeneID:821100 KEGG:ath:AT3G02510
TAIR:At3g02510 OMA:NGGVQCW PhylomeDB:Q0WSJ9 Genevestigator:Q2V3Z2
Uniprot:Q0WSJ9
Length = 393
Score = 1663 (590.5 bits), Expect = 4.4e-171, P = 4.4e-171
Identities = 314/393 (79%), Positives = 338/393 (86%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDG--- 57
M + TSIIAWGSGEDGQLGIG NEE+EW CVV+ALEPY VRSVV+GSRNSLAICDDG
Sbjct: 1 MVTATSIIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMF 60
Query: 58 --------------KTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 103
+TKTENIPS+V AL+N KI QAAIGGWHCLAVDDQGRAYAWGGNEY
Sbjct: 61 TWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEY 120
Query: 104 GQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWP 163
GQCGEEP KD+ GR +RRDIVIP+RCAPKL VRQVAAGGTHSVVLTREGHVWTWGQPWP
Sbjct: 121 GQCGEEP-LKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQPWP 179
Query: 164 PGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQP 223
PGDIKQISVPVRVQGLE V+LIAVGAFHNLAL+EDG L AWGNNEYGQLGTGDTQP S P
Sbjct: 180 PGDIKQISVPVRVQGLENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHP 239
Query: 224 IPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLL 283
+PVQGL LTLVDIAAGGWHSTALTD GEVYGWGRGEHGRLG GDNDKSSKMVPQKVNLL
Sbjct: 240 VPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLL 299
Query: 284 AGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAG 343
A EDI+QVSCGGTHSVALTRDG IFSFGRGDHGRLGYGRKVTTGQP+E+PI IP P +
Sbjct: 300 AEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIKIPPPEGSF 359
Query: 344 DGVDR----RWIAKLVACGGRHTLAIVEWQTEE 372
+ D +W AK +ACGGRHTLAIVEW++++
Sbjct: 360 NHTDEEEEGKWSAKSIACGGRHTLAIVEWKSDD 392
>TAIR|locus:2146142 [details] [associations]
symbol:AT5G16040 "AT5G16040" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 EMBL:AL391145
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.19750
UniGene:At.49027 EMBL:BT028960 IPI:IPI00525887 PIR:T51387
RefSeq:NP_197108.1 HSSP:O87916 ProteinModelPortal:Q9LFS0 SMR:Q9LFS0
PRIDE:Q9LFS0 EnsemblPlants:AT5G16040.1 GeneID:831461
KEGG:ath:AT5G16040 TAIR:At5g16040 InParanoid:Q9LFS0 OMA:TTGHPME
PhylomeDB:Q9LFS0 ProtClustDB:CLSN2686124 Genevestigator:Q9LFS0
Uniprot:Q9LFS0
Length = 396
Score = 1645 (584.1 bits), Expect = 3.6e-169, P = 3.6e-169
Identities = 312/395 (78%), Positives = 340/395 (86%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK-- 58
MAS TS+IAWGSGEDGQLG+G +EE+E VV ALEP+ VRSVV GSRNSLAICDDGK
Sbjct: 1 MASATSVIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLF 60
Query: 59 ---------------TKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 103
TKTE+ PS V +L+N KIVQAAIGGWHCLAVDDQGRAYAWGGNEY
Sbjct: 61 TWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120
Query: 104 GQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWP 163
GQCGEEP KD+TGR +RRDIVIP+RCA +L VRQVAAGGTHSVVLTREG+VWTWGQPWP
Sbjct: 121 GQCGEEPS-KDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQPWP 179
Query: 164 PGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQP 223
PGDIKQISVPVRVQGLE V+LIAVGAFHNLAL+EDG LWAWGNNEYGQLGTGDTQPRS P
Sbjct: 180 PGDIKQISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYP 239
Query: 224 IPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLL 283
IPVQGL LTLVDIAAGGWHSTALT++GEVYGWGRGEHGRLGFGDNDKSSKM+PQKVNLL
Sbjct: 240 IPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLL 299
Query: 284 AGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAG 343
AGEDI+QVSCGGTHSVALTRDG IFSFGRGDHGRLGYGRKVTTGQP+E+PI+IP P
Sbjct: 300 AGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIHIPPPEGRF 359
Query: 344 DGVDR----RWIAKLVACGGRHTLAIVEWQTEESK 374
+ D +WIAK VACGGRHTLAIVEW+ ++ +
Sbjct: 360 NHTDEEDDGKWIAKHVACGGRHTLAIVEWKYDQEE 394
>TAIR|locus:2163986 [details] [associations]
symbol:UVR8 "UVB-RESISTANCE 8" species:3702 "Arabidopsis
thaliana" [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=ISS]
[GO:0009411 "response to UV" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0010224 "response to UV-B"
evidence=IEP;IGI] [GO:0000785 "chromatin" evidence=IDA] [GO:0009649
"entrainment of circadian clock" evidence=IMP] [GO:0006007 "glucose
catabolic process" evidence=RCA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009649 GO:GO:0000785 EMBL:AB007646
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0010224 eggNOG:COG5184 UniGene:At.49214
EMBL:AF130441 EMBL:AY125497 EMBL:BT000600 IPI:IPI00521473
PIR:T50662 RefSeq:NP_201191.1 PDB:4D9S PDB:4DNU PDB:4DNV PDB:4DNW
PDBsum:4D9S PDBsum:4DNU PDBsum:4DNV PDBsum:4DNW
ProteinModelPortal:Q9FN03 SMR:Q9FN03 DIP:DIP-59667N STRING:Q9FN03
PRIDE:Q9FN03 EnsemblPlants:AT5G63860.1 GeneID:836506
KEGG:ath:AT5G63860 TAIR:At5g63860 HOGENOM:HOG000240817
InParanoid:Q9FN03 OMA:GTLWCWG PhylomeDB:Q9FN03
ProtClustDB:CLSN2686209 Genevestigator:Q9FN03 Uniprot:Q9FN03
Length = 440
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 121/350 (34%), Positives = 187/350 (53%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAIC------------ 54
+ +WG GEDGQLG G+ E+R + AL+ +++ SV G+ +++A
Sbjct: 36 VCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWG 95
Query: 55 DDGKTKTEN-----IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 109
D G+ N P + AL +I Q A G HCLAV +G +WG N+ GQ G
Sbjct: 96 DFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLG-- 153
Query: 110 PERKDDTGRILRRDIVIPQRCAP--KLIVRQVAAGGTHSVVLTREGHV--WTWGQ--PWP 163
DT D ++PQ+ + ++ VAAG H+ +T +G + W WG+
Sbjct: 154 ---LGDT-----EDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLG 205
Query: 164 PGDIKQISVPVRVQ--GLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS 221
GD VP RV G E++ ++A G H +++ GAL+ +G ++YGQLG GD +
Sbjct: 206 LGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL 265
Query: 222 QPIPVQGLSGLTLVDIAAGGW-HSTALTDDGEVYGWGRGEHGRLGFGDN-DKSSKMVPQK 279
P ++ LS + I+ GGW H+ ALT DG++YGWG + G++G G+N D+ S P +
Sbjct: 266 IPHKLEALSNSFISQIS-GGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCS---PVQ 321
Query: 280 VNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQP 329
V + +VQVSCG H++A+T ++F++GRG +G+LG G V P
Sbjct: 322 VRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFP 371
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 109/354 (30%), Positives = 177/354 (50%)
Query: 37 PYKVRSVVAGSRNSLA------IC-----DDGKT---KTENIPS--QVNALSNTKIVQAA 80
P KV + AG+ +S+A +C +DG+ E+ PS Q++AL +IV
Sbjct: 14 PRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVT 73
Query: 81 IGGWHCLAVDDQG-RAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQV 139
G H +A G Y+WG ++G+ G G +P + + ++Q+
Sbjct: 74 CGADHTVAYSQSGMEVYSWGWGDFGRLGH--------GNSSDLFTPLPIKALHGIRIKQI 125
Query: 140 AAGGTHSVVLTREGHVWTWGQPWPP----GDIKQISVPVRVQGLE--QVKLIAVGAFHNL 193
A G +H + +T EG V +WG+ GD + VP ++Q E ++K++A GA H
Sbjct: 126 ACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTA 185
Query: 194 ALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEV 253
A+ EDG L+ WG YG LG GD R P V G + +A G H+ +++ G +
Sbjct: 186 AVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGAL 245
Query: 254 YGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRG 313
Y +G ++G+LG GD + ++P K+ L+ I Q+S G H++ALT DG ++ +G
Sbjct: 246 YTYGWSKYGQLGHGDLE--DHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWN 303
Query: 314 DHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
G++G G + P++V P D D++ + V+CG RHTLA+ E
Sbjct: 304 KFGQVGVGNNLDQCSPVQV--RFP------D--DQKVVQ--VSCGWRHTLAVTE 345
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 80/253 (31%), Positives = 133/253 (52%)
Query: 120 LRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVR 175
+ D+ + AP V ++AG +HSV L V +WG+ GD + P +
Sbjct: 1 MAEDMAADEVTAPPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQ 60
Query: 176 VQGLEQVKLIAV--GAFHNLALQEDGA-LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGL 232
+ L+ ++++V GA H +A + G +++WG ++G+LG G++ P+P++ L G+
Sbjct: 61 LSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGI 120
Query: 233 TLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVS 292
+ IA G H A+T +GEV WGR ++G+LG GD + S +VPQK+ G I V+
Sbjct: 121 RIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDS--LVPQKIQAFEGIRIKMVA 178
Query: 293 CGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIA 352
G H+ A+T DG ++ +G G +G LG G + P V G+ +
Sbjct: 179 AGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVT------STGGEKMS----- 227
Query: 353 KLVACGGRHTLAI 365
+VACG RHT+++
Sbjct: 228 -MVACGWRHTISV 239
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 80/291 (27%), Positives = 142/291 (48%)
Query: 3 STTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTK-- 60
S + +WG G+ G+LG GN+ + +KAL +++ + G + LA+ +G+ +
Sbjct: 85 SGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSW 144
Query: 61 ------------TEN--IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQC 106
TE+ +P ++ A +I A G H AV + G Y WG YG
Sbjct: 145 GRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNL 204
Query: 107 GEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPP-- 164
G D T R++ + K+ + VA G H++ ++ G ++T+G W
Sbjct: 205 G----LGDRTDRLVPERVT--STGGEKMSM--VACGWRHTISVSYSGALYTYG--WSKYG 254
Query: 165 ----GDIKQISVPVRVQGLEQ--VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQ 218
GD++ +P +++ L + I+ G H +AL DG L+ WG N++GQ+G G+
Sbjct: 255 QLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 314
Query: 219 PRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDN 269
+ P+ V+ +V ++ G H+ A+T+ V+ WGRG +G+LG G++
Sbjct: 315 DQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGES 365
Score = 241 (89.9 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 75/273 (27%), Positives = 130/273 (47%)
Query: 9 AWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKT--------- 59
+WG ++GQLG+G+ E+ ++A E +++ V AG+ ++ A+ +DG
Sbjct: 143 SWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYG 202
Query: 60 ------KTEN-IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPER 112
+T+ +P +V + K+ A G H ++V G Y +G ++YGQ G
Sbjct: 203 NLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGH---- 258
Query: 113 KDDTGRILRRDIVIPQR--CAPKLIVRQVAAGGTHSVVLTREGHV--WTW---GQPWPPG 165
G + D +IP + + Q++ G H++ LT +G + W W GQ
Sbjct: 259 ----GDL--EDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGN 312
Query: 166 DIKQISVPVRVQGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQP 223
++ Q S PV+V+ + K++ V G H LA+ E ++AWG GQLG G++ R+ P
Sbjct: 313 NLDQCS-PVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFP 371
Query: 224 IPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGW 256
++ LS VD A+G ++ D W
Sbjct: 372 KIIEALS----VDGASGQHIESSNIDPSSGKSW 400
>UNIPROTKB|E1C4H7 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00632 InterPro:IPR017986
InterPro:IPR000569 InterPro:IPR001680 InterPro:IPR003877
InterPro:IPR015880 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 SMART:SM00355 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008270 GO:GO:0016567 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:AADN02040444
EMBL:AADN02040445 EMBL:AADN02040446 IPI:IPI00593079
Ensembl:ENSGALT00000005344 Uniprot:E1C4H7
Length = 4863
Score = 349 (127.9 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
Identities = 94/331 (28%), Positives = 163/331 (49%)
Query: 40 VRSVVAGSRNSLAICDDGKTKT-ENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAW 98
VR+ GS L + D T + + + + S K+ + H LA +G ++W
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHR-SIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 99 GGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTW 158
G +YG+ G ++++ + K++V V+AG HS +T +G ++TW
Sbjct: 483 GDGDYGKLGHGNSSTQKYPKLIQGPL------QGKVVVC-VSAGYRHSAAVTEDGELYTW 535
Query: 159 GQP----WPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDG-ALWAWGNNEYGQLG 213
G+ GD ++P V+ + V ++ G+ H +AL +DG +W++G + G+LG
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595
Query: 214 TGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSS 273
GDT +P ++ L G+ + + AG S ALT G+VY WG G LG G ++ ++
Sbjct: 596 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATA 653
Query: 274 KMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVP 333
+ P+ + LA IV +S G +H +AL+ D ++++G G+ G G +TG P
Sbjct: 654 -LRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN--STG-----P 705
Query: 334 INIPAPRNAGDGVDRRWIAKLVACGGRHTLA 364
I P + DGV + ++ G H+LA
Sbjct: 706 ITKPKKVSGLDGVS----IQQISAGTSHSLA 732
Score = 333 (122.3 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 98/313 (31%), Positives = 158/313 (50%)
Query: 63 NIPSQVNALSNTKIVQAAIGGWHC-LAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILR 121
N+ V A S ++ Q + G +C + G A G YG+ G+ DD +L
Sbjct: 4016 NVMVPVAAPSFSQ-AQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDL-HVLT 4071
Query: 122 RDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQ 177
I Q +V + G HS+ LT G V++WG G+ + P +++
Sbjct: 4072 V-ISALQGFVVTQLVTSCGSDG-HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIE 4129
Query: 178 GL--EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLV 235
L E+V ++ G H+ + DG L+ +GN +YG+LG G+T + P V L G +
Sbjct: 4130 ALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG 4189
Query: 236 DIAAGGWHSTALTDDGE-VYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCG 294
+A G H+ A++ DG V+ +G G++G+LG G++ ++K PQKV++L G I +V+CG
Sbjct: 4190 QVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNS--TAKSSPQKVDILCGIGIKKVACG 4247
Query: 295 GTHSVALTRDGHIFSFGRGDHGRLGY--GRKVTTGQPMEVPINIPAPRNAGDGVDRRWIA 352
SVALT+DGH+++FG+ +G GR +P +VP+ GV
Sbjct: 4248 TQFSVALTKDGHVYTFGQVSDRLIGLPEGRARNHNRPQQVPVL--------SGV----FI 4295
Query: 353 KLVACGGRHTLAI 365
+ +A G HTLA+
Sbjct: 4296 EDIAVGAEHTLAL 4308
Score = 329 (120.9 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 93/351 (26%), Positives = 167/351 (47%)
Query: 7 IIAWGSGEDGQLG-IGNN-----------EEREWVCVVKALEPYKVR-SVVAGSRNSLAI 53
+ WG+G GQL G N + ++ VC + +V+A S
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVPVAAPSFSQAQQVVCGQNCTFVIQANGTVLACGEGSYGR 4058
Query: 54 CDDGKTKTENIPSQVNALSN---TKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEP 110
G + ++ + ++AL T++V + H +A+ + G ++WG +YG+ G
Sbjct: 4059 LGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGN 4118
Query: 111 ERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----WPPGD 166
+ RR I +++ Q++ G HS V+T +G ++T+G G+
Sbjct: 4119 SDRQ------RRPRQIEALQGEEVV--QMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN 4170
Query: 167 IKQISVPVRVQGLE--QVKLIAVGAFHNLALQEDGAL-WAWGNNEYGQLGTGDTQPRSQP 223
+P RV LE Q+ +A G H +A+ DG++ WA+G+ +YG+LG G++ +S P
Sbjct: 4171 TSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSP 4230
Query: 224 IPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLL 283
V L G+ + +A G S ALT DG VY +G+ +G + + PQ+V +L
Sbjct: 4231 QKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQVSDRLIGLPEGRARNHNRPQQVPVL 4290
Query: 284 AGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPI 334
+G I ++ G H++AL+ G ++++G G+LG G +P + +
Sbjct: 4291 SGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLITV 4341
Score = 309 (113.8 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 70/201 (34%), Positives = 107/201 (53%)
Query: 168 KQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQ 227
+ + VPV Q + + G +Q +G + A G YG+LG G++ +
Sbjct: 4015 RNVMVPVAAPSFSQAQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVIS 4074
Query: 228 GLSGLT---LVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLA 284
L G LV HS ALT+ GEV+ WG G++G+LG G++D+ + P+++ L
Sbjct: 4075 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRR--PRQIEALQ 4132
Query: 285 GEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGD 344
GE++VQ+SCG HS +T DG +F+FG GD+GRLG G T+ + +P A +
Sbjct: 4133 GEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN--TSNK------KLPERVTALE 4184
Query: 345 GVDRRWIAKLVACGGRHTLAI 365
G I + VACG HT+A+
Sbjct: 4185 GYQ---IGQ-VACGLNHTVAV 4201
Score = 306 (112.8 bits), Expect = 3.7e-25, P = 3.7e-25
Identities = 77/245 (31%), Positives = 131/245 (53%)
Query: 89 VDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTH-SV 147
V + Y WG N Q E + K ++ + AP Q G + +
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEK-----------ILQPKLAPSFSDAQTIEAGQYCTF 416
Query: 148 VLTREGHVWTWGQP----WPPGDIKQISVPVRV-----QGLEQVKLIAVGAFHNLALQED 198
V++ +G V G+ GD S ++ + +++V H LA +
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE 476
Query: 199 GALWAWGNNEYGQLGTGDTQPRSQPIPVQG-LSGLTLVDIAAGGWHSTALTDDGEVYGWG 257
G +++WG+ +YG+LG G++ + P +QG L G +V ++AG HS A+T+DGE+Y WG
Sbjct: 477 GEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 258 RGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGH-IFSFGRGDHG 316
G+ GRLG GD++ S+ +P V ++ ++ +VSCG +H++AL++DG ++SFG GD+G
Sbjct: 537 EGDFGRLGHGDSN--SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 317 RLGYG 321
+LG+G
Sbjct: 593 KLGHG 597
Score = 303 (111.7 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 89/287 (31%), Positives = 146/287 (50%)
Query: 1 MASTTS--IIAWGSGEDGQLGIGNNEEREWVCVVKA-LEPYKVRSVVAGSRNSLAICDDG 57
+A TT + +WG G+ G+LG GN+ +++ +++ L+ V V AG R+S A+ +DG
Sbjct: 471 LAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDG 530
Query: 58 KTKT----------------ENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRA-YAWGG 100
+ T NIP+ V +SN + + + G H +A+ GR +++GG
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 101 NEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG- 159
+ G+ G DT R+ + ++ + +R+V AG S+ LT G V+ WG
Sbjct: 589 GDNGKLGH-----GDTNRVYKPKVI---EALQGMFIRKVCAGSQSSLALTSTGQVYAWGC 640
Query: 160 -QPWPPGDIKQISV-PVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTG 215
G + ++ P ++ L ++ I++G H LAL D ++AWGNN GQ G G
Sbjct: 641 GACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 216 D-TQPRSQPIPVQGLSGLTLVDIAAGGWHS---TALTDDGEVYGWGR 258
+ T P ++P V GL G+++ I+AG HS TAL D +V W R
Sbjct: 701 NSTGPITKPKKVSGLDGVSIQQISAGTSHSLAWTALPRDRQVVAWHR 747
Score = 284 (105.0 bits), Expect = 8.0e-23, P = 8.0e-23
Identities = 93/339 (27%), Positives = 157/339 (46%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNS----LAICDDGK--- 58
S+ A G G G+LG+G++ + + + EP++ V+ S+ S LA +G+
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFS 481
Query: 59 -------------TKTENIPSQVNALSNTKIVQAAIGGW-HCLAVDDQGRAYAWGGNEYG 104
+ T+ P + K+V G+ H AV + G Y WG ++G
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 105 QCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGH-VWTWGQ--- 160
+ G D R IP V +V+ G +H++ L+++G VW++G
Sbjct: 542 RLGHG----DSNSRN------IPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDN 591
Query: 161 -PWPPGDIKQISVPVRVQGLEQ--VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDT 217
GD ++ P ++ L+ ++ + G+ +LAL G ++AWG LG G +
Sbjct: 592 GKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCGSS 649
Query: 218 QPRS-QPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMV 276
+ + +P ++ L+ +VDI+ G H AL+ D EVY WG G+ G G N
Sbjct: 650 EATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITK 708
Query: 277 PQKVNLLAGEDIVQVSCGGTHSVALT---RDGHIFSFGR 312
P+KV+ L G I Q+S G +HS+A T RD + ++ R
Sbjct: 709 PKKVSGLDGVSIQQISAGTSHSLAWTALPRDRQVVAWHR 747
Score = 254 (94.5 bits), Expect = 4.0e-21, Sum P(2) = 4.0e-21
Identities = 75/257 (29%), Positives = 123/257 (47%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDT 116
G + + P Q+ AL ++VQ + G H V G+ + +G +YG+ G
Sbjct: 4117 GNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLG--------L 4168
Query: 117 GRILRRDIVIPQRCAPK--LIVRQVAAGGTHSVVLTREGH-VWTWGQ----PWPPGDIKQ 169
G + + P+R + QVA G H+V ++ +G VW +G G+
Sbjct: 4169 GNTSNKKL--PERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTA 4226
Query: 170 ISVPVRVQGL--EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS--QPIP 225
S P +V L +K +A G ++AL +DG ++ +G +G + + R+ +P
Sbjct: 4227 KSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQVSDRLIGLPEGRARNHNRPQQ 4286
Query: 226 VQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAG 285
V LSG+ + DIA G H+ AL+ G+VY WG G+LG G + + P + +L G
Sbjct: 4287 VPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVRE--PTLITVLQG 4344
Query: 286 EDIVQVSCGGTHSVALT 302
++I Q+S G HS A T
Sbjct: 4345 KNIRQISAGRCHSAAWT 4361
Score = 252 (93.8 bits), Expect = 6.3e-18, P = 6.3e-18
Identities = 65/226 (28%), Positives = 110/226 (48%)
Query: 148 VLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWA 203
+++ V+ WG G ++I P + I G + + DG++ A
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRA 426
Query: 204 WGNNEYGQLGTGDTQPRS--QPIPVQGLSGLTLVDIAAGG-WHSTALTDDGEVYGWGRGE 260
G YG+LG GD+ +S + + + + V + G H+ A T +GEV+ WG G+
Sbjct: 427 CGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 261 HGRLGFGDNDKSSKMVPQKVN-LLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLG 319
+G+LG G++ S++ P+ + L G+ +V VS G HS A+T DG ++++G GD GRLG
Sbjct: 487 YGKLGHGNS--STQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 320 YGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
+G +P + N G+ V+CG HT+A+
Sbjct: 545 HG----DSNSRNIPTLVKDISNVGE----------VSCGSSHTIAL 576
Score = 187 (70.9 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 53/177 (29%), Positives = 90/177 (50%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKT------ 59
++ ++G G++G+LG G+ V++AL+ +R V AGS++SLA+ G+
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 60 ---------KTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEP 110
T P + L+ T+IV +IG HCLA+ YAWG N GQCG+
Sbjct: 642 ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700
Query: 111 ERKDDTGRILRRDIVIPQRCA--PKLIVRQVAAGGTHSVVLT---REGHVWTWGQPW 162
+ TG I + P++ + + ++Q++AG +HS+ T R+ V W +P+
Sbjct: 701 ---NSTGPITK-----PKKVSGLDGVSIQQISAGTSHSLAWTALPRDRQVVAWHRPY 749
Score = 182 (69.1 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 52/176 (29%), Positives = 85/176 (48%)
Query: 195 LQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVY 254
+ E ++ WG+N QL G + QP S ++ AG + + ++ DG V
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIE--AGQYCTFVISTDGSVR 425
Query: 255 GWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCG-GT--HSVALTRDGHIFSFG 311
G+G +GRLG GD++ S + +K+ I +VS G+ H++A T +G +FS+G
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTL--KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483
Query: 312 RGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
GD+G+LG+G T + P I P + V+ G RH+ A+ E
Sbjct: 484 DGDYGKLGHGNSST----QKYPKLIQGPLQGK-------VVVCVSAGYRHSAAVTE 528
Score = 152 (58.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 52/178 (29%), Positives = 87/178 (48%)
Query: 1 MASTTS--IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK 58
MA T S + +WG G+ G+LG GN++ + ++AL+ +V + G ++S + DGK
Sbjct: 4095 MALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGK 4154
Query: 59 ----------------TKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNE 102
T + +P +V AL +I Q A G H +AV G + W +
Sbjct: 4155 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDG-SMVWAFGD 4213
Query: 103 YGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ 160
G G+ + T + + + I C + +++VA G SV LT++GHV+T+GQ
Sbjct: 4214 -GDYGKLG-LGNSTAKSSPQKVDI--LCG--IGIKKVACGTQFSVALTKDGHVYTFGQ 4265
Score = 97 (39.2 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 27/80 (33%), Positives = 36/80 (45%)
Query: 242 WHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVAL 301
WH D VY WG G HG+L + MVP V + QV CG + +
Sbjct: 3991 WHLGGKCD---VYLWGAGRHGQLAEAGRNV---MVP--VAAPSFSQAQQVVCGQNCTFVI 4042
Query: 302 TRDGHIFSFGRGDHGRLGYG 321
+G + + G G +GRLG G
Sbjct: 4043 QANGTVLACGEGSYGRLGQG 4062
Score = 76 (31.8 bits), Expect = 4.0e-21, Sum P(2) = 4.0e-21
Identities = 18/56 (32%), Positives = 35/56 (62%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVA--GSR-NSLAICDDGK 58
+++A G G G+LG GN+++ + V+ AL+ + V +V GS +S+A+ + G+
Sbjct: 4047 TVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE 4102
Score = 47 (21.6 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
Identities = 14/61 (22%), Positives = 25/61 (40%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYK-VRSVVAGSRNSLAICDDGKT 59
++ T + WGS QL G E+ + K + +++ AG + I DG
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEK---ILQPKLAPSFSDAQTIEAGQYCTFVISTDGSV 424
Query: 60 K 60
+
Sbjct: 425 R 425
Score = 42 (19.8 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 10/35 (28%), Positives = 21/35 (60%)
Query: 168 KQIS-VPVRVQGLEQVKLIAVGAFHNLALQEDGAL 201
KQ+ +P+ ++ LE+V L+ V +++ ED +
Sbjct: 4608 KQLCCIPLILEDLEEVDLLYVQTLNSILHIEDSGI 4642
>ZFIN|ZDB-GENE-070718-6 [details] [associations]
symbol:herc2 "hect domain and RLD 2" species:7955
"Danio rerio" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0020037 "heme binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00632
InterPro:IPR000433 InterPro:IPR000569 InterPro:IPR001199
InterPro:IPR009060 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-070718-6
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:CABZ01006344 EMBL:CABZ01006345 EMBL:CABZ01006346 EMBL:FP085470
IPI:IPI00495163 Ensembl:ENSDART00000110770 Uniprot:E7EYK8
Length = 4832
Score = 424 (154.3 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 116/393 (29%), Positives = 188/393 (47%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK------- 58
+I WG GQLG + + +AL + ++ G + A+ DGK
Sbjct: 3951 TIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGYG 4010
Query: 59 ---------TKTENIPSQVNALSNTKIVQAAI--GGWHCLAVDDQGRAYAWGGNEYGQCG 107
T++ + P+ + ++ + I + A+ GG HCLA+ +G Y+WG E G+ G
Sbjct: 4011 AGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAEDGKLG 4070
Query: 108 EEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----WP 163
D R++ + V +AAGG HS +T G ++TWG+
Sbjct: 4071 HGNRSPCDRPRVIES--------LRGVEVVDIAAGGAHSACITASGELYTWGKGRYGRLG 4122
Query: 164 PGDIKQISVPVRVQGLEQVKLIAV----GAFHNLALQEDGALWAWGNNEYGQLGTGDTQP 219
GD + P V+ L+ ++I V G L L +D +W+WG+ +YG+LG G +
Sbjct: 4123 HGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDG 4182
Query: 220 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 279
P+ + L+GL +V + G S ALT G VY WG+G++ RLG G +D + P++
Sbjct: 4183 CKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR--PRQ 4240
Query: 280 VNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
V L G+ ++ ++ G H V T DG ++++G D G+LG G T ++ P + A
Sbjct: 4241 VQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG----TTNAIQRPRLVAAL 4296
Query: 340 RNAGDGVDRRWIAKLVACGGRHTLAIVEWQTEE 372
+ G ++R VACG HTLA W T +
Sbjct: 4297 Q--GKKINR------VACGSAHTLA---WSTSK 4318
Score = 378 (138.1 bits), Expect = 7.1e-38, Sum P(2) = 7.1e-38
Identities = 102/316 (32%), Positives = 168/316 (53%)
Query: 64 IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRD 123
+PS LS +VQ A G AV +G+ YA CGE + G +
Sbjct: 2978 VPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYA--------CGEATNGRLGLG-LSSGT 3028
Query: 124 IVIPQRCAP--KLIVRQVA--AGGTHSVVLTREGHVWTWGQ--PWPPGDIKQISV--PVR 175
I IP++ + +V++VA +GG H++ LT +G V++WG+ G +++ P
Sbjct: 3029 IPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRL 3088
Query: 176 VQGLE--QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLT 233
++ L+ +++ IA G+ H+ A+ G L++WG EYG+LG GD + +P V+ L G
Sbjct: 3089 IEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHR 3148
Query: 234 LVDIAAGGW--HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQV 291
+V +A G + ALTD+G V+ WG G+ G+LG G ++ + +PQ + L G+ + Q+
Sbjct: 3149 VVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGGSEGCN--IPQNIERLNGQGVCQI 3206
Query: 292 SCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWI 351
CG S+ALT+ G ++++G+GD+ RLG+G V +P V +G+ + I
Sbjct: 3207 ECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMV-----------EGLRGKKI 3255
Query: 352 AKLVACGGRHTLAIVE 367
VA G H LA+ E
Sbjct: 3256 VH-VAVGALHCLAVTE 3270
Score = 365 (133.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 94/298 (31%), Positives = 152/298 (51%)
Query: 33 KALEPYKVRSVVAGSRNSLAICDDGKTKTENI------PSQVNALSNTKIVQAAI--GGW 84
KAL V +V + L + G T+N P V+AL++ KI++ A G
Sbjct: 436 KALSNLGVTQIVCSEKGFLILTITGAVYTQNYKSTTLAPMLVHALTSRKIMKLAAHPDGQ 495
Query: 85 HCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGT 144
H LA+ G ++WG + G+ G + ++ V R K +V +A G T
Sbjct: 496 HYLALSVNGEVFSWGCGDGGRLGHGDTTYLEEPTMIS---VFSGRPVGKQVVH-IACGST 551
Query: 145 HSVVLTREGHVWTWGQP----WPPGDIKQISVPVRVQGLEQVKLIAV----GAFHNLALQ 196
+S +T +G + TWG+ G + + P+ V L+ +K+I V G LA+
Sbjct: 552 YSAAITADGELHTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVIDVACGSGDAQTLAVT 611
Query: 197 EDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGW 256
E+G +W+WG+ +YG+LG G + P V+ L L +V + G S ALT DG+VY W
Sbjct: 612 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTW 671
Query: 257 GRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGD 314
G+G++ RLG G D+ + P+ ++ L G+ +V ++ G TH +ALT +G + S+G D
Sbjct: 672 GKGDNQRLGHG-TDEHVRY-PKLLDSLQGKRVVDIAVGSTHCLALTEEGEVHSWGSND 727
Score = 363 (132.8 bits), Expect = 2.7e-36, Sum P(2) = 2.7e-36
Identities = 98/317 (30%), Positives = 162/317 (51%)
Query: 64 IPSQVNALSNTKIVQAAI--GGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILR 121
IP Q++ALSN + + A+ GG H +A+ G+ ++WG + G+ G D R++
Sbjct: 3031 IPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI- 3089
Query: 122 RDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----WPPGDIKQISVPVRVQ 177
+ + +R +R +A G +HS +T G +++WG GD P V+
Sbjct: 3090 -EALKTKR------IRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVK 3142
Query: 178 GL--EQVKLIAVGA--FHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLT 233
L +V +A G+ LAL ++G +++WG+ ++G+LG G ++ + P ++ L+G
Sbjct: 3143 VLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG 3202
Query: 234 LVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSC 293
+ I G S ALT G V+ WG+G++ RLG G + K PQ V L G+ IV V+
Sbjct: 3203 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRK--PQMVEGLRGKKIVHVAV 3260
Query: 294 GGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAK 353
G H +A+T G +F++G DHG+ G G +P V G++ + I +
Sbjct: 3261 GALHCLAVTETGQVFAWGDNDHGQQGNGTTTVNRKPTLV-----------QGLEGQKITR 3309
Query: 354 LVACGGRHTLAIVEWQT 370
VACG H++A W T
Sbjct: 3310 -VACGSSHSVA---WTT 3322
Score = 341 (125.1 bits), Expect = 2.5e-39, Sum P(2) = 2.5e-39
Identities = 86/261 (32%), Positives = 133/261 (50%)
Query: 84 WHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAA-G 142
W L+ G Y WG N GQ G K + +P +R V G
Sbjct: 3942 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAK----------VKVPTPTEALATLRPVQLIG 3990
Query: 143 GTHSV-VLTREGHVWTWGQPWPP----GDIKQISVPVRVQGLEQV--KLIAV--GAFHNL 193
G ++ +T +G ++ G G + +S P ++ ++ V + +AV G H L
Sbjct: 3991 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCL 4050
Query: 194 ALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEV 253
AL +G L++WG E G+LG G+ P +P ++ L G+ +VDIAAGG HS +T GE+
Sbjct: 4051 ALSSEGELYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGEL 4110
Query: 254 YGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGG--THSVALTRDGHIFSFG 311
Y WG+G +GRLG GD++ K P+ V L G ++ V+CG ++ LT D ++S+G
Sbjct: 4111 YTWGKGRYGRLGHGDSEDQLK--PKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWG 4168
Query: 312 RGDHGRLGYGRKVTTGQPMEV 332
GD+G+LG G PM++
Sbjct: 4169 DGDYGKLGRGGSDGCKVPMKI 4189
Score = 328 (120.5 bits), Expect = 5.7e-38, Sum P(2) = 5.7e-38
Identities = 92/269 (34%), Positives = 137/269 (50%)
Query: 113 KDDTGRILRRDIVIPQ--RCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIK-- 168
KD G + I +P L V QVA G +T EG V+ G+ G +
Sbjct: 2965 KDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGEA-TNGRLGLG 3023
Query: 169 ----QISVPVRVQGLEQ--VKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPR 220
I +P ++ L VK +AV G H +AL DG +++WG + G+LG
Sbjct: 3024 LSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNC 3083
Query: 221 SQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV 280
+P ++ L + DIA G HS A+T GE+Y WG GE+GRLG GDN ++++ P+ V
Sbjct: 3084 DKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDN--TTQLRPKLV 3141
Query: 281 NLLAGEDIVQVSCGG--THSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPA 338
+L G +VQV+CG ++ALT +G +FS+G GD G+LG G + +P NI
Sbjct: 3142 KVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGGS----EGCNIPQNIE- 3196
Query: 339 PRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
R G GV + + CG + +LA+ +
Sbjct: 3197 -RLNGQGVCQ------IECGAQFSLALTK 3218
Score = 318 (117.0 bits), Expect = 2.0e-26, P = 2.0e-26
Identities = 78/237 (32%), Positives = 126/237 (53%)
Query: 143 GTHSVVLTREGHVWTWG----QPWPPGDIKQISVPVRVQGL------EQVKLIAVGAFHN 192
G H + L+ G V++WG GD + P + +QV IA G+ ++
Sbjct: 494 GQHYLALSVNGEVFSWGCGDGGRLGHGDTTYLEEPTMISVFSGRPVGKQVVHIACGSTYS 553
Query: 193 LALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGW--HSTALTDD 250
A+ DG L WG YG+LG G ++ ++ P+ V L GL ++D+A G + A+T++
Sbjct: 554 AAITADGELHTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVIDVACGSGDAQTLAVTEN 613
Query: 251 GEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSF 310
G+V+ WG G++G+LG G +D P+ V L DIV+V CG SVALT+DG ++++
Sbjct: 614 GQVWSWGDGDYGKLGRGGSDGCK--TPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTW 671
Query: 311 GRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
G+GD+ RLG+G T + + P + D + + + +A G H LA+ E
Sbjct: 672 GKGDNQRLGHG----TDEHVRYPKLL-------DSLQGKRVVD-IAVGSTHCLALTE 716
Score = 305 (112.4 bits), Expect = 8.3e-26, Sum P(2) = 8.3e-26
Identities = 84/266 (31%), Positives = 133/266 (50%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK-------- 58
+ +WG G+DG+LG + + +++AL+ ++R + GS +S AI G+
Sbjct: 3064 VFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGE 3123
Query: 59 --------TKTENIPSQVNALSNTKIVQAAIGGWHC--LAVDDQGRAYAWGGNEYGQCGE 108
T+ P V L ++VQ A G LA+ D+G ++WG ++G+ G
Sbjct: 3124 YGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLG- 3182
Query: 109 EPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP--WPPGD 166
R G + ++I +R + + Q+ G S+ LT+ G VWTWG+ + G
Sbjct: 3183 ---RGGSEGCNIPQNI---ERLNGQGVC-QIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3235
Query: 167 IKQISV--PVRVQGLEQVKLI--AVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ 222
+ V P V+GL K++ AVGA H LA+ E G ++AWG+N++GQ G G T +
Sbjct: 3236 GTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNGTTTVNRK 3295
Query: 223 PIPVQGLSGLTLVDIAAGGWHSTALT 248
P VQGL G + +A G HS A T
Sbjct: 3296 PTLVQGLEGQKITRVACGSSHSVAWT 3321
Score = 246 (91.7 bits), Expect = 3.4e-17, P = 3.4e-17
Identities = 69/248 (27%), Positives = 113/248 (45%)
Query: 57 GKTKTENIPSQVNALSNT----KIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPER 112
G T P+ ++ S ++V A G + A+ G + WG YG+ G
Sbjct: 520 GDTTYLEEPTMISVFSGRPVGKQVVHIACGSTYSAAITADGELHTWGRGNYGRLGHGSS- 578
Query: 113 KDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIK 168
+D T +L + K+I +G ++ +T G VW+WG G
Sbjct: 579 EDQTTPML-----VTALKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 633
Query: 169 QISVPVRVQGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPV 226
P V+ L+ + ++ V G+ ++AL +DG ++ WG + +LG G + P +
Sbjct: 634 GCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLL 693
Query: 227 QGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGE 286
L G +VDIA G H ALT++GEV+ WG + +L D S+K P+ + L +
Sbjct: 694 DSLQGKRVVDIAVGSTHCLALTEEGEVHSWGSND--KLQHFDTLFSNKKQPKALPGLNSK 751
Query: 287 DIVQVSCG 294
IV +SCG
Sbjct: 752 HIVGISCG 759
Score = 195 (73.7 bits), Expect = 5.5e-20, Sum P(2) = 5.5e-20
Identities = 45/131 (34%), Positives = 73/131 (55%)
Query: 201 LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGE 260
++ WG N+ QLG P + LS L +V +A G A+T +G+VY G
Sbjct: 2957 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGEAT 3016
Query: 261 HGRLGFGDNDKSSKMVPQKVNLLAGEDI--VQVSCGGTHSVALTRDGHIFSFGRGDHGRL 318
+GRLG G + + +P++++ L+ + V V GG H++ALT DG +FS+G GD G+L
Sbjct: 3017 NGRLGLGLSSGTIP-IPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 3075
Query: 319 GYGRKVTTGQP 329
G+ ++ +P
Sbjct: 3076 GHFSRMNCDKP 3086
Score = 195 (73.7 bits), Expect = 5.4e-19, Sum P(3) = 5.4e-19
Identities = 54/169 (31%), Positives = 83/169 (49%)
Query: 199 GALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGR 258
G ++ WG+N GQLG + P P + L+ L V + G A+T DG++Y G
Sbjct: 3950 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4009
Query: 259 GEHGRLGFGDNDKSSKMVPQKVNLLAGEDI--VQVSCGGTHSVALTRDGHIFSFGRGDHG 316
G GRLG G + S P + + I V V+ GG H +AL+ +G ++S+G + G
Sbjct: 4010 GAGGRLGIGGTESVS--TPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAEDG 4067
Query: 317 RLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
+LG+G + P + P I + R + VD +A GG H+ I
Sbjct: 4068 KLGHGNR----SPCDRPRVIESLRGV-EVVD-------IAAGGAHSACI 4104
Score = 135 (52.6 bits), Expect = 2.5e-39, Sum P(2) = 2.5e-39
Identities = 31/110 (28%), Positives = 59/110 (53%)
Query: 9 AWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKT------- 61
+WG G+ G+LG G ++ + +V+ L+ + V GS+ S+A+ DG+ T
Sbjct: 618 SWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQ 677
Query: 62 -------ENI--PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNE 102
E++ P +++L ++V A+G HCLA+ ++G ++WG N+
Sbjct: 678 RLGHGTDEHVRYPKLLDSLQGKRVVDIAVGSTHCLALTEEGEVHSWGSND 727
Score = 91 (37.1 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNS--LAICDDG 57
+ S+ + +WG GE G+LG G+N + +VK L ++V V GSR++ LA+ D+G
Sbjct: 3110 ITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEG 3168
Score = 88 (36.0 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 1 MASTTS--IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK 58
MA T + +WG G+DG+LG + + +++AL+ ++R + GS +S AI G+
Sbjct: 3056 MALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGE 3115
Score = 84 (34.6 bits), Expect = 7.1e-38, Sum P(2) = 7.1e-38
Identities = 25/99 (25%), Positives = 51/99 (51%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKT--ENI 64
+ WG G++ +LG G +E + ++ +L+ +V + GS + LA+ ++G+ + N
Sbjct: 668 VYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKRVVDIAVGSTHCLALTEEGEVHSWGSND 727
Query: 65 PSQ-VNAL-SNTKIVQAAIG--GWHCLAVD-DQGRAYAW 98
Q + L SN K +A G H + + G++++W
Sbjct: 728 KLQHFDTLFSNKKQPKALPGLNSKHIVGISCGPGQSFSW 766
Score = 79 (32.9 bits), Expect = 1.8e-33, Sum P(2) = 1.8e-33
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLA 52
+ T + AWG + GQ G G +V+ LE K+ V GS +S+A
Sbjct: 3268 VTETGQVFAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3319
Score = 42 (19.8 bits), Expect = 8.3e-26, Sum P(2) = 8.3e-26
Identities = 7/10 (70%), Positives = 7/10 (70%)
Query: 248 TDDGEVYGWG 257
T DG V GWG
Sbjct: 3690 TSDGSVNGWG 3699
Score = 38 (18.4 bits), Expect = 5.4e-19, Sum P(3) = 5.4e-19
Identities = 7/18 (38%), Positives = 8/18 (44%)
Query: 161 PWPPGDIKQISVPVRVQG 178
P PP D S P +G
Sbjct: 3428 PVPPSDCSSASSPCEAEG 3445
>UNIPROTKB|E1BW48 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0020037
"heme binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0032183 "SUMO binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005743 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 SUPFAM:SSF46934 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OMA:QLAFTRD EMBL:AADN02017653
IPI:IPI00571031 Ensembl:ENSGALT00000027018 ArrayExpress:E1BW48
Uniprot:E1BW48
Length = 4841
Score = 407 (148.3 bits), Expect = 4.2e-36, Sum P(2) = 4.2e-36
Identities = 115/395 (29%), Positives = 188/395 (47%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK------- 58
+I WG GQLG + + +AL + ++ G + A+ DGK
Sbjct: 3958 TIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYG 4017
Query: 59 ---------TKTENIPSQVNALSNTKIVQAAI--GGWHCLAVDDQGRAYAWGGNEYGQCG 107
T++ + P+ + ++ + I + A+ GG HCLA+ +G Y+WG E G+ G
Sbjct: 4018 AGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4077
Query: 108 EEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----WP 163
D R++ + V +AAGG HS +T G ++TWG+
Sbjct: 4078 HGNRSPCDRPRVIES--------LRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLG 4129
Query: 164 PGDIKQISVPVRVQGLEQVKLIAV----GAFHNLALQEDGALWAWGNNEYGQLGTGDTQP 219
GD + P V+ L+ ++I + G L L +D +W+WG+ +YG+LG G +
Sbjct: 4130 HGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4189
Query: 220 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 279
P+ + L+ L +V + G S ALT G VY WG+G++ RLG G +D + P++
Sbjct: 4190 CKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR--PRQ 4247
Query: 280 VNLLAGEDIVQVSCGGTHSVALTRDG--HIFSFGRGDHGRLGYGRKVTTGQPMEVPINIP 337
V L G+ ++ ++ G H V T DG ++++G D G+LG G TT ++ P +
Sbjct: 4248 VQGLQGKKVIAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLGDG---TTNA-IQRPRLVA 4303
Query: 338 APRNAGDGVDRRWIAKLVACGGRHTLAIVEWQTEE 372
A + G ++R VACG HTLA W T +
Sbjct: 4304 ALQ--GKKINR------VACGSAHTLA---WSTSK 4327
Score = 371 (135.7 bits), Expect = 4.3e-34, Sum P(2) = 4.3e-34
Identities = 91/281 (32%), Positives = 153/281 (54%)
Query: 64 IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRD 123
+PS LS +VQ A G AV +G+ YA CGE + G I
Sbjct: 2986 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA--------CGEATNGRLGLG-ISSGT 3036
Query: 124 IVIPQRCAP--KLIVRQVA--AGGTHSVVLTREGHVWTWGQ--PWPPGDIKQISV--PVR 175
+ IP++ +V++VA +GG H++ LT +G +++WG+ G +++ P
Sbjct: 3037 VPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRL 3096
Query: 176 VQGLE--QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLT 233
++ L+ +++ IA G+ H+ A+ G L+ WG EYG+LG GD + +P V+ L G
Sbjct: 3097 IEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR 3156
Query: 234 LVDIAAGGW--HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQV 291
++ +A G + ALTD+G V+ WG G+ G+LG G ++ + +PQ + L G+ + Q+
Sbjct: 3157 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN--IPQNIERLNGQGVCQI 3214
Query: 292 SCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
CG S+ALT+ G ++++G+GD+ RLG+G V +P V
Sbjct: 3215 ECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVV 3255
Score = 363 (132.8 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 86/279 (30%), Positives = 146/279 (52%)
Query: 65 PSQVNALSNTKIVQAAI--GGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRR 122
P V +L++ IV+ A G H LA+ G ++WG + G+ G + +++
Sbjct: 485 PQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLIS- 543
Query: 123 DIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----WPPGDIKQISVPVRVQG 178
+ + A K +V +A G T+S +T EG ++TWG+ G + ++P+ V G
Sbjct: 544 --ALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTG 600
Query: 179 LEQVKLIAV----GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTL 234
L+ +K+I V G LA+ E+G +W+WG+ +YG+LG G + P ++ L L +
Sbjct: 601 LKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDI 660
Query: 235 VDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCG 294
V + G S ALT DG+VY WG+G++ RLG G + P+ + L G+ ++ V+ G
Sbjct: 661 VKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVR--YPKLLEGLKGKKVIDVAAG 718
Query: 295 GTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVP 333
TH +ALT D + S+G D + ++T +P +P
Sbjct: 719 STHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEPAALP 757
Score = 361 (132.1 bits), Expect = 8.1e-37, Sum P(2) = 8.1e-37
Identities = 99/320 (30%), Positives = 162/320 (50%)
Query: 61 TENIPSQVNALSNTKIVQAAI--GGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGR 118
T IP Q+ ALSN + + A+ GG H +A+ G+ ++WG + G+ G D R
Sbjct: 3036 TVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPR 3095
Query: 119 ILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----WPPGDIKQISVPV 174
++ + + +R +R +A G +HS +T G ++TWG GD P
Sbjct: 3096 LI--EALKTKR------IRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPK 3147
Query: 175 RVQGL--EQVKLIAVGA--FHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLS 230
V+ L +V +A G+ LAL ++G +++WG+ ++G+LG G ++ + P ++ L+
Sbjct: 3148 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3207
Query: 231 GLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQ 290
G + I G S ALT G V+ WG+G++ RLG G + K PQ V L G+ IV
Sbjct: 3208 GQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRK--PQVVEGLRGKKIVH 3265
Query: 291 VSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRW 350
V+ G H +A+T G ++++G DHG+ G G +P V G++ +
Sbjct: 3266 VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLV-----------QGLEGQK 3314
Query: 351 IAKLVACGGRHTLAIVEWQT 370
I + VACG H++A W T
Sbjct: 3315 ITR-VACGSSHSVA---WTT 3330
Score = 342 (125.4 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 102/323 (31%), Positives = 155/323 (47%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVC-VVKALEPYKVRSVV--AGSRNSLAIC--------- 54
+ A G +G+LG+G + + + AL Y V+ V +G R+++A+
Sbjct: 3017 VYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWG 3076
Query: 55 --DDGKT---KTENI--PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 107
DDGK N P + AL +I A G H A+ G Y WG EYG+ G
Sbjct: 3077 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLG 3136
Query: 108 EEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGG--THSVVLTREGHVWTWGQ----P 161
D+T ++ + + + ++I QVA G ++ LT EG V++WG
Sbjct: 3137 HG----DNTTQLKPKMVKV--LLGHRVI--QVACGSRDAQTLALTDEGLVFSWGDGDFGK 3188
Query: 162 WPPGDIKQISVPVRVQGL--EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQP 219
G + ++P ++ L + V I GA +LAL + G +W WG +Y +LG G
Sbjct: 3189 LGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 3248
Query: 220 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 279
+P V+GL G +V +A G H A+TD G+VY WG +HG+ G G + K P
Sbjct: 3249 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRK--PTL 3306
Query: 280 VNLLAGEDIVQVSCGGTHSVALT 302
V L G+ I +V+CG +HSVA T
Sbjct: 3307 VQGLEGQKITRVACGSSHSVAWT 3329
Score = 341 (125.1 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
Identities = 92/296 (31%), Positives = 151/296 (51%)
Query: 84 WHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAA-G 142
W L+ G Y WG N GQ G K + +P C +R V G
Sbjct: 3949 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAK----------VKVPTPCEALATLRPVQLIG 3997
Query: 143 GTHSV-VLTREGHVWTWGQPWPP----GDIKQISVPVRVQGLEQV--KLIAV--GAFHNL 193
G ++ +T +G ++ G G + +S P ++ ++ V K +AV G H L
Sbjct: 3998 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCL 4057
Query: 194 ALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEV 253
AL +G +++WG E G+LG G+ P +P ++ L G+ +VDIAAGG HS +T G++
Sbjct: 4058 ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDL 4117
Query: 254 YGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGG--THSVALTRDGHIFSFG 311
+ WG+G +GRLG GD++ K P+ V L G ++ ++CG ++ LT D ++S+G
Sbjct: 4118 FTWGKGRYGRLGHGDSEDQLK--PKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWG 4175
Query: 312 RGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
GD+G+LG G + G +VP+ I + + G + K V CG + ++A+ +
Sbjct: 4176 DGDYGKLGRGG--SDG--CKVPMKIDSLTDLG-------VVK-VECGSQFSVALTK 4219
Score = 331 (121.6 bits), Expect = 4.1e-28, Sum P(2) = 4.1e-28
Identities = 97/316 (30%), Positives = 157/316 (49%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P Q L+N +VQ A L + GR Y N DT L +
Sbjct: 443 PIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYNS------------DT---LGPQL 487
Query: 125 VIPQRCAPKLIVRQVA-AGGTHSVVLTREGHVWTWG----QPWPPGDIKQISVPVRVQGL 179
V Q A + IV+ A + G H + L+ G V++WG GD + P + L
Sbjct: 488 V--QSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISAL 545
Query: 180 ------EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLT 233
+ V IA G+ ++ A+ +G L+ WG YG+LG G ++ ++ P+ V GL GL
Sbjct: 546 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLK 605
Query: 234 LVDIAAGGW--HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQV 291
++D++ G + A+T++G+V+ WG G++G+LG G +D P+ + L DIV+V
Sbjct: 606 VIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK--TPKLIEKLQDLDIVKV 663
Query: 292 SCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWI 351
CG S+ALT+DG ++++G+GD+ RLG+G T + + P + +G+ + +
Sbjct: 664 RCGSQFSIALTKDGQVYTWGKGDNQRLGHG----TEEHVRYPKLL-------EGLKGKKV 712
Query: 352 AKLVACGGRHTLAIVE 367
VA G H LA+ E
Sbjct: 713 ID-VAAGSTHCLALTE 727
Score = 325 (119.5 bits), Expect = 1.3e-36, Sum P(2) = 1.3e-36
Identities = 92/268 (34%), Positives = 138/268 (51%)
Query: 113 KDDTGRILRRDIVIPQ--RCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPP--G-DI 167
KD G + I +P L V QVA G +T EG V+ G+ G I
Sbjct: 2973 KDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGI 3032
Query: 168 KQISVPV--RVQGLEQ--VKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS 221
+VP+ ++ L VK +AV G H +AL DG +++WG + G+LG
Sbjct: 3033 SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCD 3092
Query: 222 QPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVN 281
+P ++ L + DIA G HS A+T GE+Y WG GE+GRLG GDN ++++ P+ V
Sbjct: 3093 KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN--TTQLKPKMVK 3150
Query: 282 LLAGEDIVQVSCGG--THSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
+L G ++QV+CG ++ALT +G +FS+G GD G+LG G + +P NI
Sbjct: 3151 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS----EGCNIPQNIE-- 3204
Query: 340 RNAGDGVDRRWIAKLVACGGRHTLAIVE 367
R G GV + + CG + +LA+ +
Sbjct: 3205 RLNGQGVCQ------IECGAQFSLALTK 3226
Score = 255 (94.8 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 71/254 (27%), Positives = 118/254 (46%)
Query: 57 GKTKTENIPSQVNALSNTK----IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPER 112
G T P ++ALS + +V A G + A+ +G Y WG YG+ G
Sbjct: 531 GDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSS- 589
Query: 113 KDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIK 168
+D T +L + K+I +G ++ +T G VW+WG G
Sbjct: 590 EDQTIPMLVTGLK-----GLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 644
Query: 169 QISVPVRVQGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPV 226
P ++ L+ + ++ V G+ ++AL +DG ++ WG + +LG G + P +
Sbjct: 645 GCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLL 704
Query: 227 QGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGE 286
+GL G ++D+AAG H ALT+D EV+ WG + + F D + +K P + L +
Sbjct: 705 EGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HF-DTLRITKPEPAALPGLDTK 762
Query: 287 DIVQVSCGGTHSVA 300
IV ++CG S A
Sbjct: 763 HIVGIACGPAQSFA 776
Score = 200 (75.5 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 62/213 (29%), Positives = 100/213 (46%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIGGWHC--LAVDDQGRAYAWGGNEYGQCGEEPERKD 114
G ++ + IP V L K++ + G LAV + G+ ++WG +YG+ G
Sbjct: 587 GSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 646
Query: 115 DTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG----QPWPPGDIKQI 170
T +++ + L + +V G S+ LT++G V+TWG Q G + +
Sbjct: 647 KTPKLIEK--------LQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHV 698
Query: 171 SVPVRVQGLEQVKLI--AVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIP--V 226
P ++GL+ K+I A G+ H LAL ED + +WG+N+ Q DT ++P P +
Sbjct: 699 RYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRITKPEPAAL 756
Query: 227 QGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRG 259
GL +V IA G S A + E W G
Sbjct: 757 PGLDTKHIVGIACGPAQSFAWSSCSE---WSIG 786
Score = 196 (74.1 bits), Expect = 4.7e-19, Sum P(2) = 4.7e-19
Identities = 46/131 (35%), Positives = 72/131 (54%)
Query: 201 LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGE 260
++ WG N+ QLG P + LS L +V +A G A+T +G+VY G
Sbjct: 2965 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3024
Query: 261 HGRLGFGDNDKSSKMVPQKVNLLAGEDI--VQVSCGGTHSVALTRDGHIFSFGRGDHGRL 318
+GRLG G + + +P+++ L+ + V V GG H++ALT DG IFS+G GD G+L
Sbjct: 3025 NGRLGLGISS-GTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKL 3083
Query: 319 GYGRKVTTGQP 329
G+ ++ +P
Sbjct: 3084 GHFSRMNCDKP 3094
Score = 127 (49.8 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 44/130 (33%), Positives = 64/130 (49%)
Query: 221 SQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV 280
S PI +GL+ L +V IA L+ +G VY S + PQ V
Sbjct: 441 SGPIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYN------------SDTLGPQLV 488
Query: 281 NLLAGEDIVQVSC--GGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVP--INI 336
LA +IV+++ G H +AL+ +G +FS+G GD GRLG+G V P+E P I+
Sbjct: 489 QSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTV----PLEEPKLISA 544
Query: 337 PAPRNAGDGV 346
+ + AG V
Sbjct: 545 LSGKQAGKHV 554
Score = 125 (49.1 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
Identities = 31/114 (27%), Positives = 56/114 (49%)
Query: 9 AWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKT------- 61
+WG G+ G+LG G ++ + +++ L+ + V GS+ S+A+ DG+ T
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQ 688
Query: 62 -------ENI--PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQC 106
E++ P + L K++ A G HCLA+ + ++WG N+ QC
Sbjct: 689 RLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QC 740
Score = 104 (41.7 bits), Expect = 7.2e-17, Sum P(2) = 7.2e-17
Identities = 47/179 (26%), Positives = 76/179 (42%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNN---EEREWVCVVKALEPYK-VRSVVAGSRNSLAICDD 56
+++ + +WG G+ G+LG G+ EE + + + + K V + GS S AI +
Sbjct: 511 LSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAAITAE 570
Query: 57 GKTKT---ENIPSQVNALSNTKIVQAAIGGWHCLAVDD----QGRAYAWGGNEYGQCGEE 109
G+ T N + S + + + G L V D G A E GQ
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSW 630
Query: 110 PERKDDTGRILRRDIVIPQRC-APKLIVR-------QVAAGGTHSVVLTREGHVWTWGQ 160
+ D G++ R C PKLI + +V G S+ LT++G V+TWG+
Sbjct: 631 GD--GDYGKLGRGG---SDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGK 684
Score = 91 (37.1 bits), Expect = 8.1e-37, Sum P(2) = 8.1e-37
Identities = 28/99 (28%), Positives = 49/99 (49%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKT--ENI 64
+ WG G++ +LG G E + +++ L+ KV V AGS + LA+ +D + + N
Sbjct: 679 VYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Query: 65 PSQ-VNALSNTKIVQAAIGGW---HCLAVD-DQGRAYAW 98
Q + L TK AA+ G H + + +++AW
Sbjct: 739 QCQHFDTLRITKPEPAALPGLDTKHIVGIACGPAQSFAW 777
Score = 91 (37.1 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 1 MASTTS--IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK 58
MA T I +WG G+DG+LG + + +++AL+ ++R + GS +S AI G+
Sbjct: 3064 MALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGE 3123
Query: 59 TKT 61
T
Sbjct: 3124 LYT 3126
Score = 90 (36.7 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNS--LAICDDG 57
+ S+ + WG GE G+LG G+N + +VK L ++V V GSR++ LA+ D+G
Sbjct: 3118 ITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3176
Score = 78 (32.5 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLA 52
+ T + AWG + GQ G G +V+ LE K+ V GS +S+A
Sbjct: 3276 VTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327
Score = 55 (24.4 bits), Expect = 4.3e-34, Sum P(2) = 4.3e-34
Identities = 14/54 (25%), Positives = 23/54 (42%)
Query: 5 TSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK 58
T + WG + QLG + + + L V V GS++ A+ +GK
Sbjct: 2963 TKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3016
Score = 54 (24.1 bits), Expect = 3.7e-29, Sum P(2) = 3.7e-29
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 82 GGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDT 116
G W+ + D + + G E+ Q GE P RKDD+
Sbjct: 34 GLWNEMVKDGE---IVYPGTEFTQNGELPPRKDDS 65
Score = 43 (20.2 bits), Expect = 1.4e-30, Sum P(3) = 1.4e-30
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 40 VRSVVAGSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIGG 83
+ + AG ++ A+ DD TEN P +V L V A IGG
Sbjct: 2177 ITHIFAGKQSEGAVLDDYFPDTEN-P-EVGGLM---AVLAVIGG 2215
Score = 38 (18.4 bits), Expect = 4.2e-36, Sum P(2) = 4.2e-36
Identities = 7/10 (70%), Positives = 7/10 (70%)
Query: 9 AWGSGEDGQL 18
AW SGED L
Sbjct: 212 AWRSGEDADL 221
Score = 37 (18.1 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 6/8 (75%), Positives = 6/8 (75%)
Query: 250 DGEVYGWG 257
DG V GWG
Sbjct: 3699 DGSVNGWG 3706
>UNIPROTKB|E1C8K2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 EMBL:AADN02017653 IPI:IPI00818548
Ensembl:ENSGALT00000036596 ArrayExpress:E1C8K2 Uniprot:E1C8K2
Length = 4841
Score = 407 (148.3 bits), Expect = 4.2e-36, Sum P(2) = 4.2e-36
Identities = 115/395 (29%), Positives = 188/395 (47%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK------- 58
+I WG GQLG + + +AL + ++ G + A+ DGK
Sbjct: 3958 TIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYG 4017
Query: 59 ---------TKTENIPSQVNALSNTKIVQAAI--GGWHCLAVDDQGRAYAWGGNEYGQCG 107
T++ + P+ + ++ + I + A+ GG HCLA+ +G Y+WG E G+ G
Sbjct: 4018 AGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4077
Query: 108 EEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----WP 163
D R++ + V +AAGG HS +T G ++TWG+
Sbjct: 4078 HGNRSPCDRPRVIES--------LRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLG 4129
Query: 164 PGDIKQISVPVRVQGLEQVKLIAV----GAFHNLALQEDGALWAWGNNEYGQLGTGDTQP 219
GD + P V+ L+ ++I + G L L +D +W+WG+ +YG+LG G +
Sbjct: 4130 HGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4189
Query: 220 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 279
P+ + L+ L +V + G S ALT G VY WG+G++ RLG G +D + P++
Sbjct: 4190 CKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR--PRQ 4247
Query: 280 VNLLAGEDIVQVSCGGTHSVALTRDG--HIFSFGRGDHGRLGYGRKVTTGQPMEVPINIP 337
V L G+ ++ ++ G H V T DG ++++G D G+LG G TT ++ P +
Sbjct: 4248 VQGLQGKKVIAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLGDG---TTNA-IQRPRLVA 4303
Query: 338 APRNAGDGVDRRWIAKLVACGGRHTLAIVEWQTEE 372
A + G ++R VACG HTLA W T +
Sbjct: 4304 ALQ--GKKINR------VACGSAHTLA---WSTSK 4327
Score = 371 (135.7 bits), Expect = 4.3e-34, Sum P(2) = 4.3e-34
Identities = 91/281 (32%), Positives = 153/281 (54%)
Query: 64 IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRD 123
+PS LS +VQ A G AV +G+ YA CGE + G I
Sbjct: 2986 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA--------CGEATNGRLGLG-ISSGT 3036
Query: 124 IVIPQRCAP--KLIVRQVA--AGGTHSVVLTREGHVWTWGQ--PWPPGDIKQISV--PVR 175
+ IP++ +V++VA +GG H++ LT +G +++WG+ G +++ P
Sbjct: 3037 VPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRL 3096
Query: 176 VQGLE--QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLT 233
++ L+ +++ IA G+ H+ A+ G L+ WG EYG+LG GD + +P V+ L G
Sbjct: 3097 IEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR 3156
Query: 234 LVDIAAGGW--HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQV 291
++ +A G + ALTD+G V+ WG G+ G+LG G ++ + +PQ + L G+ + Q+
Sbjct: 3157 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN--IPQNIERLNGQGVCQI 3214
Query: 292 SCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
CG S+ALT+ G ++++G+GD+ RLG+G V +P V
Sbjct: 3215 ECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVV 3255
Score = 363 (132.8 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 86/279 (30%), Positives = 146/279 (52%)
Query: 65 PSQVNALSNTKIVQAAI--GGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRR 122
P V +L++ IV+ A G H LA+ G ++WG + G+ G + +++
Sbjct: 485 PQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLIS- 543
Query: 123 DIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----WPPGDIKQISVPVRVQG 178
+ + A K +V +A G T+S +T EG ++TWG+ G + ++P+ V G
Sbjct: 544 --ALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTG 600
Query: 179 LEQVKLIAV----GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTL 234
L+ +K+I V G LA+ E+G +W+WG+ +YG+LG G + P ++ L L +
Sbjct: 601 LKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDI 660
Query: 235 VDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCG 294
V + G S ALT DG+VY WG+G++ RLG G + P+ + L G+ ++ V+ G
Sbjct: 661 VKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVR--YPKLLEGLKGKKVIDVAAG 718
Query: 295 GTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVP 333
TH +ALT D + S+G D + ++T +P +P
Sbjct: 719 STHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEPAALP 757
Score = 361 (132.1 bits), Expect = 8.1e-37, Sum P(2) = 8.1e-37
Identities = 99/320 (30%), Positives = 162/320 (50%)
Query: 61 TENIPSQVNALSNTKIVQAAI--GGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGR 118
T IP Q+ ALSN + + A+ GG H +A+ G+ ++WG + G+ G D R
Sbjct: 3036 TVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPR 3095
Query: 119 ILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----WPPGDIKQISVPV 174
++ + + +R +R +A G +HS +T G ++TWG GD P
Sbjct: 3096 LI--EALKTKR------IRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPK 3147
Query: 175 RVQGL--EQVKLIAVGA--FHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLS 230
V+ L +V +A G+ LAL ++G +++WG+ ++G+LG G ++ + P ++ L+
Sbjct: 3148 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3207
Query: 231 GLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQ 290
G + I G S ALT G V+ WG+G++ RLG G + K PQ V L G+ IV
Sbjct: 3208 GQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRK--PQVVEGLRGKKIVH 3265
Query: 291 VSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRW 350
V+ G H +A+T G ++++G DHG+ G G +P V G++ +
Sbjct: 3266 VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLV-----------QGLEGQK 3314
Query: 351 IAKLVACGGRHTLAIVEWQT 370
I + VACG H++A W T
Sbjct: 3315 ITR-VACGSSHSVA---WTT 3330
Score = 342 (125.4 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 102/323 (31%), Positives = 155/323 (47%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVC-VVKALEPYKVRSVV--AGSRNSLAIC--------- 54
+ A G +G+LG+G + + + AL Y V+ V +G R+++A+
Sbjct: 3017 VYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWG 3076
Query: 55 --DDGKT---KTENI--PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 107
DDGK N P + AL +I A G H A+ G Y WG EYG+ G
Sbjct: 3077 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLG 3136
Query: 108 EEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGG--THSVVLTREGHVWTWGQ----P 161
D+T ++ + + + ++I QVA G ++ LT EG V++WG
Sbjct: 3137 HG----DNTTQLKPKMVKV--LLGHRVI--QVACGSRDAQTLALTDEGLVFSWGDGDFGK 3188
Query: 162 WPPGDIKQISVPVRVQGL--EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQP 219
G + ++P ++ L + V I GA +LAL + G +W WG +Y +LG G
Sbjct: 3189 LGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 3248
Query: 220 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 279
+P V+GL G +V +A G H A+TD G+VY WG +HG+ G G + K P
Sbjct: 3249 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRK--PTL 3306
Query: 280 VNLLAGEDIVQVSCGGTHSVALT 302
V L G+ I +V+CG +HSVA T
Sbjct: 3307 VQGLEGQKITRVACGSSHSVAWT 3329
Score = 341 (125.1 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
Identities = 92/296 (31%), Positives = 151/296 (51%)
Query: 84 WHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAA-G 142
W L+ G Y WG N GQ G K + +P C +R V G
Sbjct: 3949 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAK----------VKVPTPCEALATLRPVQLIG 3997
Query: 143 GTHSV-VLTREGHVWTWGQPWPP----GDIKQISVPVRVQGLEQV--KLIAV--GAFHNL 193
G ++ +T +G ++ G G + +S P ++ ++ V K +AV G H L
Sbjct: 3998 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCL 4057
Query: 194 ALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEV 253
AL +G +++WG E G+LG G+ P +P ++ L G+ +VDIAAGG HS +T G++
Sbjct: 4058 ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDL 4117
Query: 254 YGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGG--THSVALTRDGHIFSFG 311
+ WG+G +GRLG GD++ K P+ V L G ++ ++CG ++ LT D ++S+G
Sbjct: 4118 FTWGKGRYGRLGHGDSEDQLK--PKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWG 4175
Query: 312 RGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
GD+G+LG G + G +VP+ I + + G + K V CG + ++A+ +
Sbjct: 4176 DGDYGKLGRGG--SDG--CKVPMKIDSLTDLG-------VVK-VECGSQFSVALTK 4219
Score = 331 (121.6 bits), Expect = 4.1e-28, Sum P(2) = 4.1e-28
Identities = 97/316 (30%), Positives = 157/316 (49%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P Q L+N +VQ A L + GR Y N DT L +
Sbjct: 443 PIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYNS------------DT---LGPQL 487
Query: 125 VIPQRCAPKLIVRQVA-AGGTHSVVLTREGHVWTWG----QPWPPGDIKQISVPVRVQGL 179
V Q A + IV+ A + G H + L+ G V++WG GD + P + L
Sbjct: 488 V--QSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISAL 545
Query: 180 ------EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLT 233
+ V IA G+ ++ A+ +G L+ WG YG+LG G ++ ++ P+ V GL GL
Sbjct: 546 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLK 605
Query: 234 LVDIAAGGW--HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQV 291
++D++ G + A+T++G+V+ WG G++G+LG G +D P+ + L DIV+V
Sbjct: 606 VIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK--TPKLIEKLQDLDIVKV 663
Query: 292 SCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWI 351
CG S+ALT+DG ++++G+GD+ RLG+G T + + P + +G+ + +
Sbjct: 664 RCGSQFSIALTKDGQVYTWGKGDNQRLGHG----TEEHVRYPKLL-------EGLKGKKV 712
Query: 352 AKLVACGGRHTLAIVE 367
VA G H LA+ E
Sbjct: 713 ID-VAAGSTHCLALTE 727
Score = 325 (119.5 bits), Expect = 1.3e-36, Sum P(2) = 1.3e-36
Identities = 92/268 (34%), Positives = 138/268 (51%)
Query: 113 KDDTGRILRRDIVIPQ--RCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPP--G-DI 167
KD G + I +P L V QVA G +T EG V+ G+ G I
Sbjct: 2973 KDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGI 3032
Query: 168 KQISVPV--RVQGLEQ--VKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS 221
+VP+ ++ L VK +AV G H +AL DG +++WG + G+LG
Sbjct: 3033 SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCD 3092
Query: 222 QPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVN 281
+P ++ L + DIA G HS A+T GE+Y WG GE+GRLG GDN ++++ P+ V
Sbjct: 3093 KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN--TTQLKPKMVK 3150
Query: 282 LLAGEDIVQVSCGG--THSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
+L G ++QV+CG ++ALT +G +FS+G GD G+LG G + +P NI
Sbjct: 3151 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS----EGCNIPQNIE-- 3204
Query: 340 RNAGDGVDRRWIAKLVACGGRHTLAIVE 367
R G GV + + CG + +LA+ +
Sbjct: 3205 RLNGQGVCQ------IECGAQFSLALTK 3226
Score = 255 (94.8 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 71/254 (27%), Positives = 118/254 (46%)
Query: 57 GKTKTENIPSQVNALSNTK----IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPER 112
G T P ++ALS + +V A G + A+ +G Y WG YG+ G
Sbjct: 531 GDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSS- 589
Query: 113 KDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIK 168
+D T +L + K+I +G ++ +T G VW+WG G
Sbjct: 590 EDQTIPMLVTGLK-----GLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 644
Query: 169 QISVPVRVQGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPV 226
P ++ L+ + ++ V G+ ++AL +DG ++ WG + +LG G + P +
Sbjct: 645 GCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLL 704
Query: 227 QGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGE 286
+GL G ++D+AAG H ALT+D EV+ WG + + F D + +K P + L +
Sbjct: 705 EGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HF-DTLRITKPEPAALPGLDTK 762
Query: 287 DIVQVSCGGTHSVA 300
IV ++CG S A
Sbjct: 763 HIVGIACGPAQSFA 776
Score = 200 (75.5 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 62/213 (29%), Positives = 100/213 (46%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIGGWHC--LAVDDQGRAYAWGGNEYGQCGEEPERKD 114
G ++ + IP V L K++ + G LAV + G+ ++WG +YG+ G
Sbjct: 587 GSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 646
Query: 115 DTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG----QPWPPGDIKQI 170
T +++ + L + +V G S+ LT++G V+TWG Q G + +
Sbjct: 647 KTPKLIEK--------LQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHV 698
Query: 171 SVPVRVQGLEQVKLI--AVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIP--V 226
P ++GL+ K+I A G+ H LAL ED + +WG+N+ Q DT ++P P +
Sbjct: 699 RYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRITKPEPAAL 756
Query: 227 QGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRG 259
GL +V IA G S A + E W G
Sbjct: 757 PGLDTKHIVGIACGPAQSFAWSSCSE---WSIG 786
Score = 196 (74.1 bits), Expect = 4.7e-19, Sum P(2) = 4.7e-19
Identities = 46/131 (35%), Positives = 72/131 (54%)
Query: 201 LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGE 260
++ WG N+ QLG P + LS L +V +A G A+T +G+VY G
Sbjct: 2965 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3024
Query: 261 HGRLGFGDNDKSSKMVPQKVNLLAGEDI--VQVSCGGTHSVALTRDGHIFSFGRGDHGRL 318
+GRLG G + + +P+++ L+ + V V GG H++ALT DG IFS+G GD G+L
Sbjct: 3025 NGRLGLGISS-GTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKL 3083
Query: 319 GYGRKVTTGQP 329
G+ ++ +P
Sbjct: 3084 GHFSRMNCDKP 3094
Score = 127 (49.8 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 44/130 (33%), Positives = 64/130 (49%)
Query: 221 SQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV 280
S PI +GL+ L +V IA L+ +G VY S + PQ V
Sbjct: 441 SGPIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYN------------SDTLGPQLV 488
Query: 281 NLLAGEDIVQVSC--GGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVP--INI 336
LA +IV+++ G H +AL+ +G +FS+G GD GRLG+G V P+E P I+
Sbjct: 489 QSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTV----PLEEPKLISA 544
Query: 337 PAPRNAGDGV 346
+ + AG V
Sbjct: 545 LSGKQAGKHV 554
Score = 125 (49.1 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
Identities = 31/114 (27%), Positives = 56/114 (49%)
Query: 9 AWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKT------- 61
+WG G+ G+LG G ++ + +++ L+ + V GS+ S+A+ DG+ T
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQ 688
Query: 62 -------ENI--PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQC 106
E++ P + L K++ A G HCLA+ + ++WG N+ QC
Sbjct: 689 RLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QC 740
Score = 104 (41.7 bits), Expect = 7.2e-17, Sum P(2) = 7.2e-17
Identities = 47/179 (26%), Positives = 76/179 (42%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNN---EEREWVCVVKALEPYK-VRSVVAGSRNSLAICDD 56
+++ + +WG G+ G+LG G+ EE + + + + K V + GS S AI +
Sbjct: 511 LSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAAITAE 570
Query: 57 GKTKT---ENIPSQVNALSNTKIVQAAIGGWHCLAVDD----QGRAYAWGGNEYGQCGEE 109
G+ T N + S + + + G L V D G A E GQ
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSW 630
Query: 110 PERKDDTGRILRRDIVIPQRC-APKLIVR-------QVAAGGTHSVVLTREGHVWTWGQ 160
+ D G++ R C PKLI + +V G S+ LT++G V+TWG+
Sbjct: 631 GD--GDYGKLGRGG---SDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGK 684
Score = 91 (37.1 bits), Expect = 8.1e-37, Sum P(2) = 8.1e-37
Identities = 28/99 (28%), Positives = 49/99 (49%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKT--ENI 64
+ WG G++ +LG G E + +++ L+ KV V AGS + LA+ +D + + N
Sbjct: 679 VYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Query: 65 PSQ-VNALSNTKIVQAAIGGW---HCLAVD-DQGRAYAW 98
Q + L TK AA+ G H + + +++AW
Sbjct: 739 QCQHFDTLRITKPEPAALPGLDTKHIVGIACGPAQSFAW 777
Score = 91 (37.1 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 1 MASTTS--IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK 58
MA T I +WG G+DG+LG + + +++AL+ ++R + GS +S AI G+
Sbjct: 3064 MALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGE 3123
Query: 59 TKT 61
T
Sbjct: 3124 LYT 3126
Score = 90 (36.7 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNS--LAICDDG 57
+ S+ + WG GE G+LG G+N + +VK L ++V V GSR++ LA+ D+G
Sbjct: 3118 ITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3176
Score = 78 (32.5 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLA 52
+ T + AWG + GQ G G +V+ LE K+ V GS +S+A
Sbjct: 3276 VTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327
Score = 55 (24.4 bits), Expect = 4.3e-34, Sum P(2) = 4.3e-34
Identities = 14/54 (25%), Positives = 23/54 (42%)
Query: 5 TSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK 58
T + WG + QLG + + + L V V GS++ A+ +GK
Sbjct: 2963 TKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3016
Score = 54 (24.1 bits), Expect = 3.7e-29, Sum P(2) = 3.7e-29
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 82 GGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDT 116
G W+ + D + + G E+ Q GE P RKDD+
Sbjct: 34 GLWNEMVKDGE---IVYPGTEFTQNGELPPRKDDS 65
Score = 43 (20.2 bits), Expect = 1.4e-30, Sum P(3) = 1.4e-30
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 40 VRSVVAGSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIGG 83
+ + AG ++ A+ DD TEN P +V L V A IGG
Sbjct: 2177 ITHIFAGKQSEGAVLDDYFPDTEN-P-EVGGLM---AVLAVIGG 2215
Score = 38 (18.4 bits), Expect = 4.2e-36, Sum P(2) = 4.2e-36
Identities = 7/10 (70%), Positives = 7/10 (70%)
Query: 9 AWGSGEDGQL 18
AW SGED L
Sbjct: 212 AWRSGEDADL 221
Score = 37 (18.1 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 6/8 (75%), Positives = 6/8 (75%)
Query: 250 DGEVYGWG 257
DG V GWG
Sbjct: 3699 DGSVNGWG 3706
>UNIPROTKB|E2RDC2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032183 "SUMO binding" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208 CTD:8924
KO:K10595 OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706
EMBL:AAEX03002160 EMBL:AAEX03002161 EMBL:AAEX03002162
RefSeq:XP_536160.2 ProteinModelPortal:E2RDC2
Ensembl:ENSCAFT00000015697 GeneID:479005 KEGG:cfa:479005
Uniprot:E2RDC2
Length = 4837
Score = 419 (152.6 bits), Expect = 2.3e-37, Sum P(2) = 2.3e-37
Identities = 116/393 (29%), Positives = 187/393 (47%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK------- 58
+I WG GQLG + + +AL + ++ G + A+ DGK
Sbjct: 3956 TIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYG 4015
Query: 59 ---------TKTENIPSQVNALSNTKIVQAAI--GGWHCLAVDDQGRAYAWGGNEYGQCG 107
T++ + P+ + ++ + I + A+ GG HCLA+ +G Y+WG E G+ G
Sbjct: 4016 AGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4075
Query: 108 EEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----WP 163
D R++ + V VAAGG HS +T G ++TWG+
Sbjct: 4076 HGNRSPCDRPRVIES--------LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4127
Query: 164 PGDIKQISVPVRVQGLEQVKLIAV----GAFHNLALQEDGALWAWGNNEYGQLGTGDTQP 219
D + P V+ L+ +++ V G L L +D +W+WG+ +YG+LG G +
Sbjct: 4128 HSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4187
Query: 220 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 279
P+ + L+GL +V + G S ALT G VY WG+G++ RLG G +D + P++
Sbjct: 4188 CKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR--PRQ 4245
Query: 280 VNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
V L G+ ++ ++ G H V T DG ++++G D G+LG G T ++ P + A
Sbjct: 4246 VQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG----TTNAIQRPRLVAAL 4301
Query: 340 RNAGDGVDRRWIAKLVACGGRHTLAIVEWQTEE 372
+ G V+R VACG HTLA W T +
Sbjct: 4302 Q--GKKVNR------VACGSAHTLA---WSTSK 4323
Score = 371 (135.7 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 92/281 (32%), Positives = 152/281 (54%)
Query: 64 IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRD 123
+PS LS +VQ A G AV +G+ YA CGE + G +
Sbjct: 2983 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA--------CGEATNGRLGLG-LSSGT 3033
Query: 124 IVIPQRCAP--KLIVRQVA--AGGTHSVVLTREGHVWTWGQ--PWPPGDIKQISV--PVR 175
+ IP++ +V++VA +GG H+ LT +G V++WG+ G +++ P
Sbjct: 3034 VPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRL 3093
Query: 176 VQGLE--QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLT 233
++ L+ +++ IA G+ H+ AL G L+ WG EYG+LG GD + +P V+ L G
Sbjct: 3094 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR 3153
Query: 234 LVDIAAGGW--HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQV 291
++ +A G + ALTD+G V+ WG G+ G+LG G ++ + +PQ + L G+ + Q+
Sbjct: 3154 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN--IPQNIERLNGQGVCQI 3211
Query: 292 SCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
CG S+ALT+ G ++++G+GD+ RLG+G V +P V
Sbjct: 3212 ECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVV 3252
Score = 365 (133.5 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 93/310 (30%), Positives = 155/310 (50%)
Query: 40 VRSVVAGSRNSLAICDDGKTKTE--N----IPSQVNALSNTKIVQAAI--GGWHCLAVDD 91
V + + L + +G+ T+ N P V L++ IV+ A G H LA+
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA 513
Query: 92 QGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTR 151
G Y+WG + G+ G + +++ + A K +V +A G T+S +T
Sbjct: 514 TGEVYSWGCGDGGRLGHGDTVPLEEPKVIS---AFSGKQAGKHVVH-IACGSTYSAAITA 569
Query: 152 EGHVWTWGQP----WPPGDIKQISVPVRVQGLEQVKLIAV----GAFHNLALQEDGALWA 203
EG ++TWG+ G + ++P+ V GL+ +K+I V G LA+ E+G +W+
Sbjct: 570 EGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWS 629
Query: 204 WGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGR 263
WG+ +YG+LG G + P ++ L L +V + G S ALT DG+VY WG+G++ R
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 264 LGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRK 323
LG G + P+ + L G+ ++ V+ G TH +ALT D + S+G D + +
Sbjct: 690 LGHGTEEHVR--YPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLR 747
Query: 324 VTTGQPMEVP 333
VT +P +P
Sbjct: 748 VTKPEPAALP 757
Score = 356 (130.4 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 99/320 (30%), Positives = 161/320 (50%)
Query: 61 TENIPSQVNALSNTKIVQAAI--GGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGR 118
T IP Q+ ALS+ + + A+ GG H A+ G+ ++WG + G+ G D R
Sbjct: 3033 TVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPR 3092
Query: 119 ILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----WPPGDIKQISVPV 174
++ + + +R +R +A G +HS LT G ++TWG GD P
Sbjct: 3093 LI--EALKTKR------IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3144
Query: 175 RVQGL--EQVKLIAVGA--FHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLS 230
V+ L +V +A G+ LAL ++G +++WG+ ++G+LG G ++ + P ++ L+
Sbjct: 3145 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3204
Query: 231 GLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQ 290
G + I G S ALT G V+ WG+G++ RLG G + K PQ V L G+ IV
Sbjct: 3205 GQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK--PQVVEGLRGKKIVH 3262
Query: 291 VSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRW 350
V+ G H +A+T G ++++G DHG+ G G +P V G++ +
Sbjct: 3263 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLV-----------QGLEGQK 3311
Query: 351 IAKLVACGGRHTLAIVEWQT 370
I + VACG H++A W T
Sbjct: 3312 ITR-VACGSSHSVA---WTT 3327
Score = 340 (124.7 bits), Expect = 4.5e-38, Sum P(2) = 4.5e-38
Identities = 85/261 (32%), Positives = 133/261 (50%)
Query: 84 WHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAA-G 142
W L+ G Y WG N GQ G K + +P C +R V G
Sbjct: 3947 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAK----------VKVPTPCEALATLRPVQLIG 3995
Query: 143 GTHSV-VLTREGHVWTWGQPWPP----GDIKQISVPVRVQGLEQV--KLIAV--GAFHNL 193
G ++ +T +G ++ G G + +S P ++ ++ V K +AV G H L
Sbjct: 3996 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCL 4055
Query: 194 ALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEV 253
AL +G +++WG E G+LG G+ P +P ++ L G+ +VD+AAGG HS +T G++
Sbjct: 4056 ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4115
Query: 254 YGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGG--THSVALTRDGHIFSFG 311
Y WG+G +GRLG D++ K P+ V L G +V V+CG ++ LT D ++S+G
Sbjct: 4116 YTWGKGRYGRLGHSDSEDQLK--PKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWG 4173
Query: 312 RGDHGRLGYGRKVTTGQPMEV 332
GD+G+LG G PM++
Sbjct: 4174 DGDYGKLGRGGSDGCKVPMKI 4194
Score = 329 (120.9 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
Identities = 98/316 (31%), Positives = 154/316 (48%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P Q L+N + Q A L + GR Y N DT L +
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS------------DT---LAPQL 487
Query: 125 VIPQRCAPKLIVRQVA-AGGTHSVVLTREGHVWTWG----------QPWPPGDIKQISVP 173
V Q A + IV+ A + G H + L G V++WG P + K IS
Sbjct: 488 V--QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAF 545
Query: 174 VRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLT 233
Q + V IA G+ ++ A+ +G L+ WG YG+LG G ++ + P+ V GL GL
Sbjct: 546 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 605
Query: 234 LVDIAAGGW--HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQV 291
++D+A G + A+T++G+V+ WG G++G+LG G +D P+ + L D+V+V
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK--TPKLIEKLQDLDVVKV 663
Query: 292 SCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWI 351
CG S+ALT+DG ++S+G+GD+ RLG+G T + + P + +G+ + +
Sbjct: 664 RCGSQFSIALTKDGQVYSWGKGDNQRLGHG----TEEHVRYPKLL-------EGLQGKKV 712
Query: 352 AKLVACGGRHTLAIVE 367
VA G H LA+ E
Sbjct: 713 ID-VAAGSTHCLALTE 727
Score = 321 (118.1 bits), Expect = 4.5e-36, Sum P(2) = 4.5e-36
Identities = 92/268 (34%), Positives = 137/268 (51%)
Query: 113 KDDTGRILRRDIVIPQ--RCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPP--G-DI 167
KD G + I +P L V QVA G +T EG V+ G+ G +
Sbjct: 2970 KDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGL 3029
Query: 168 KQISVPV--RVQGLEQ--VKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS 221
+VP+ ++ L VK +AV G H AL DG +++WG + G+LG
Sbjct: 3030 SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCD 3089
Query: 222 QPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVN 281
+P ++ L + DIA G HS ALT GE+Y WG GE+GRLG GDN ++++ P+ V
Sbjct: 3090 KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN--TTQLKPKMVK 3147
Query: 282 LLAGEDIVQVSCGG--THSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
+L G ++QV+CG ++ALT +G +FS+G GD G+LG G + +P NI
Sbjct: 3148 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS----EGCNIPQNIE-- 3201
Query: 340 RNAGDGVDRRWIAKLVACGGRHTLAIVE 367
R G GV + + CG + +LA+ +
Sbjct: 3202 RLNGQGVCQ------IECGAQFSLALTK 3223
Score = 301 (111.0 bits), Expect = 8.6e-26, Sum P(3) = 8.6e-26
Identities = 82/266 (30%), Positives = 134/266 (50%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKT----- 61
+ +WG G+DG+LG + + +++AL+ ++R + GS +S A+ G+ T
Sbjct: 3069 VFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128
Query: 62 -------ENI----PSQVNALSNTKIVQAAIGGWHC--LAVDDQGRAYAWGGNEYGQCGE 108
+N P V L +++Q A G LA+ D+G ++WG ++G+ G
Sbjct: 3129 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG- 3187
Query: 109 EPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP--WPPGD 166
R G + ++I +R + + Q+ G S+ LT+ G VWTWG+ + G
Sbjct: 3188 ---RGGSEGCNIPQNI---ERLNGQGVC-QIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240
Query: 167 IKQISV--PVRVQGLEQVKLI--AVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ 222
+ V P V+GL K++ AVGA H LA+ + G ++AWG+N++GQ G G T +
Sbjct: 3241 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 3300
Query: 223 PIPVQGLSGLTLVDIAAGGWHSTALT 248
P VQGL G + +A G HS A T
Sbjct: 3301 PTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 247 (92.0 bits), Expect = 3.4e-16, Sum P(2) = 3.4e-16
Identities = 69/254 (27%), Positives = 118/254 (46%)
Query: 57 GKTKTENIPSQVNALSNTK----IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPER 112
G T P ++A S + +V A G + A+ +G Y WG YG+ G
Sbjct: 531 GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSS- 589
Query: 113 KDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIK 168
+D+ +L + K+I +G ++ +T G VW+WG G
Sbjct: 590 EDEAIPMLVAGLK-----GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 644
Query: 169 QISVPVRVQGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPV 226
P ++ L+ + ++ V G+ ++AL +DG +++WG + +LG G + P +
Sbjct: 645 GCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLL 704
Query: 227 QGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGE 286
+GL G ++D+AAG H ALT+D EV+ WG + + F D + +K P + L +
Sbjct: 705 EGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HF-DTLRVTKPEPAALPGLDTK 762
Query: 287 DIVQVSCGGTHSVA 300
IV ++CG S A
Sbjct: 763 HIVGIACGPAQSFA 776
Score = 200 (75.5 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 61/211 (28%), Positives = 97/211 (45%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIGGWHC--LAVDDQGRAYAWGGNEYGQCGEEPERKD 114
G ++ E IP V L K++ A G LAV + G+ ++WG +YG+ G
Sbjct: 587 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 646
Query: 115 DTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG----QPWPPGDIKQI 170
T +++ + L V +V G S+ LT++G V++WG Q G + +
Sbjct: 647 KTPKLIEK--------LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHV 698
Query: 171 SVPVRVQGLEQVKLI--AVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQG 228
P ++GL+ K+I A G+ H LAL ED + +WG+N+ Q + +P + G
Sbjct: 699 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPG 758
Query: 229 LSGLTLVDIAAGGWHSTALTDDGEVYGWGRG 259
L +V IA G S A + E W G
Sbjct: 759 LDTKHIVGIACGPAQSFAWSSCSE---WSIG 786
Score = 194 (73.4 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 54/169 (31%), Positives = 83/169 (49%)
Query: 199 GALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGR 258
G ++ WG+N GQLG + P P + L+ L V + G A+T DG++Y G
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4014
Query: 259 GEHGRLGFGDNDKSSKMVPQKVNLLAGEDI--VQVSCGGTHSVALTRDGHIFSFGRGDHG 316
G GRLG G + S P + + I V V+ GG H +AL+ +G ++S+G + G
Sbjct: 4015 GAGGRLGIGGTESVS--TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4072
Query: 317 RLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
+LG+G + P + P I + R + VD VA GG H+ +
Sbjct: 4073 KLGHGNR----SPCDRPRVIESLRGI-EVVD-------VAAGGAHSACV 4109
Score = 193 (73.0 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 45/131 (34%), Positives = 71/131 (54%)
Query: 201 LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGE 260
++ WG N+ QLG P + LS L +V +A G A+T +G+VY G
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3021
Query: 261 HGRLGFGDNDKSSKMVPQKVNLLAGEDI--VQVSCGGTHSVALTRDGHIFSFGRGDHGRL 318
+GRLG G + + +P+++ L+ + V V GG H+ ALT DG +FS+G GD G+L
Sbjct: 3022 NGRLGLGLSS-GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080
Query: 319 GYGRKVTTGQP 329
G+ ++ +P
Sbjct: 3081 GHFSRMNCDKP 3091
Score = 124 (48.7 bits), Expect = 4.5e-38, Sum P(2) = 4.5e-38
Identities = 32/114 (28%), Positives = 55/114 (48%)
Query: 9 AWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKT----KTEN- 63
+WG G+ G+LG G ++ + +++ L+ V V GS+ S+A+ DG+ K +N
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQ 688
Query: 64 -----------IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQC 106
P + L K++ A G HCLA+ + ++WG N+ QC
Sbjct: 689 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QC 740
Score = 93 (37.8 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 28/99 (28%), Positives = 50/99 (50%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKT--ENI 64
+ +WG G++ +LG G E + +++ L+ KV V AGS + LA+ +D + + N
Sbjct: 679 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Query: 65 PSQ-VNALSNTKIVQAAIGGW---HCLAVD-DQGRAYAW 98
Q + L TK AA+ G H + + +++AW
Sbjct: 739 QCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAW 777
Score = 91 (37.1 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNS--LAICDDG 57
+ S+ + WG GE G+LG G+N + +VK L ++V V GSR++ LA+ D+G
Sbjct: 3115 LTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3173
Score = 58 (25.5 bits), Expect = 3.7e-31, Sum P(2) = 3.7e-31
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVC-VVKALEPYKVRSVV--AGSRNSLAICDDGK 58
+ A G +G+LG+G + + + AL Y V+ V +G R++ A+ DGK
Sbjct: 3014 VYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3068
Score = 49 (22.3 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 82 GGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDD 115
G W+ + D + + G E Q GE P RKDD
Sbjct: 34 GLWNEMVKDGE---IIYMGTELNQNGELPPRKDD 64
Score = 38 (18.4 bits), Expect = 2.3e-37, Sum P(2) = 2.3e-37
Identities = 7/10 (70%), Positives = 7/10 (70%)
Query: 9 AWGSGEDGQL 18
AW SGED L
Sbjct: 212 AWRSGEDADL 221
Score = 37 (18.1 bits), Expect = 8.6e-26, Sum P(3) = 8.6e-26
Identities = 6/8 (75%), Positives = 6/8 (75%)
Query: 250 DGEVYGWG 257
DG V GWG
Sbjct: 3697 DGSVNGWG 3704
>UNIPROTKB|O95714 [details] [associations]
symbol:HERC2 "E3 ubiquitin-protein ligase HERC2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0020037 "heme binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=NAS] [GO:0006281 "DNA repair" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IPI] [GO:0032183 "SUMO binding"
evidence=IDA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_6900 GO:GO:0006886 GO:GO:0005814 PROSITE:PS00678
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005085 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021 CTD:8924 KO:K10595
OMA:QLAFTRD EMBL:AF071172 EMBL:AC091304 EMBL:AC126332 EMBL:AC135329
EMBL:AF224243 EMBL:AF224242 EMBL:AF224245 EMBL:AF224244
EMBL:AF224249 EMBL:AF224246 EMBL:AF224247 EMBL:AF224248
EMBL:AF224251 EMBL:AF224250 EMBL:AF224255 EMBL:AF224254
EMBL:AF224252 EMBL:AF224253 EMBL:AF224257 EMBL:AF224256
EMBL:AF225401 EMBL:AF225400 EMBL:AF225404 EMBL:AF225402
EMBL:AF225403 EMBL:AF225407 EMBL:AF225405 EMBL:AF225406
EMBL:AF225409 EMBL:AF225408 IPI:IPI00005826 RefSeq:NP_004658.3
UniGene:Hs.434890 UniGene:Hs.610412 UniGene:Hs.741019 PDB:2KEO
PDB:3KCI PDBsum:2KEO PDBsum:3KCI ProteinModelPortal:O95714
SMR:O95714 DIP:DIP-37632N IntAct:O95714 STRING:O95714
PhosphoSite:O95714 PaxDb:O95714 PRIDE:O95714
Ensembl:ENST00000261609 GeneID:8924 KEGG:hsa:8924 UCSC:uc001zbj.3
GeneCards:GC15M028356 H-InvDB:HIX0012044 H-InvDB:HIX0017540
H-InvDB:HIX0038121 H-InvDB:HIX0038320 H-InvDB:HIX0038830
H-InvDB:HIX0173226 H-InvDB:HIX0173299 H-InvDB:HIX0194348
HGNC:HGNC:4868 HPA:CAB017188 MIM:227220 MIM:605837
neXtProt:NX_O95714 PharmGKB:PA29243 HOVERGEN:HBG081598
InParanoid:O95714 OrthoDB:EOG41C6V9 PhylomeDB:O95714
EvolutionaryTrace:O95714 GenomeRNAi:8924 NextBio:33552
ArrayExpress:O95714 Bgee:O95714 Genevestigator:O95714
GermOnline:ENSG00000128731 InterPro:IPR006624 SMART:SM00706
Uniprot:O95714
Length = 4834
Score = 418 (152.2 bits), Expect = 2.9e-37, Sum P(2) = 2.9e-37
Identities = 115/393 (29%), Positives = 187/393 (47%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK------- 58
+I WG GQLG + + +AL + ++ G + A+ DGK
Sbjct: 3953 TIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYG 4012
Query: 59 ---------TKTENIPSQVNALSNTKIVQAAI--GGWHCLAVDDQGRAYAWGGNEYGQCG 107
T++ + P+ + ++ + I + A+ GG HCLA+ +G Y+WG E G+ G
Sbjct: 4013 AGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072
Query: 108 EEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----WP 163
D R++ + V VAAGG HS +T G ++TWG+
Sbjct: 4073 HGNRSPCDRPRVIES--------LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4124
Query: 164 PGDIKQISVPVRVQGLEQVKLIAV----GAFHNLALQEDGALWAWGNNEYGQLGTGDTQP 219
D + P V+ L+ +++ + G L L +D +W+WG+ +YG+LG G +
Sbjct: 4125 HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184
Query: 220 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 279
P+ + L+GL +V + G S ALT G VY WG+G++ RLG G +D + P++
Sbjct: 4185 CKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR--PRQ 4242
Query: 280 VNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
V L G+ ++ ++ G H V T DG ++++G D G+LG G T ++ P + A
Sbjct: 4243 VQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG----TTNAIQRPRLVAAL 4298
Query: 340 RNAGDGVDRRWIAKLVACGGRHTLAIVEWQTEE 372
+ G V+R VACG HTLA W T +
Sbjct: 4299 Q--GKKVNR------VACGSAHTLA---WSTSK 4320
Score = 373 (136.4 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 93/281 (33%), Positives = 152/281 (54%)
Query: 64 IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRD 123
+PS LS +VQ A G AV +G+ YA CGE + G I
Sbjct: 2982 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA--------CGEATNGRLGLG-ISSGT 3032
Query: 124 IVIPQRCAP--KLIVRQVA--AGGTHSVVLTREGHVWTWGQ--PWPPGDIKQISV--PVR 175
+ IP++ +V++VA +GG H+ LT +G V++WG+ G +++ P
Sbjct: 3033 VPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRL 3092
Query: 176 VQGLE--QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLT 233
++ L+ +++ IA G+ H+ AL G L+ WG EYG+LG GD + +P V+ L G
Sbjct: 3093 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR 3152
Query: 234 LVDIAAGGW--HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQV 291
++ +A G + ALTD+G V+ WG G+ G+LG G ++ + +PQ + L G+ + Q+
Sbjct: 3153 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN--IPQNIERLNGQGVCQI 3210
Query: 292 SCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
CG S+ALT+ G ++++G+GD+ RLG+G V +P V
Sbjct: 3211 ECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVV 3251
Score = 365 (133.5 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 93/310 (30%), Positives = 155/310 (50%)
Query: 40 VRSVVAGSRNSLAICDDGKTKTE--N----IPSQVNALSNTKIVQAAI--GGWHCLAVDD 91
V + + L + +G+ T+ N P V L++ IV+ A G H LA+
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA 512
Query: 92 QGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTR 151
G Y+WG + G+ G + +++ + A K +V +A G T+S +T
Sbjct: 513 TGEVYSWGCGDGGRLGHGDTVPLEEPKVIS---AFSGKQAGKHVVH-IACGSTYSAAITA 568
Query: 152 EGHVWTWGQP----WPPGDIKQISVPVRVQGLEQVKLIAV----GAFHNLALQEDGALWA 203
EG ++TWG+ G + ++P+ V GL+ +K+I V G LA+ E+G +W+
Sbjct: 569 EGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWS 628
Query: 204 WGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGR 263
WG+ +YG+LG G + P ++ L L +V + G S ALT DG+VY WG+G++ R
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 264 LGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRK 323
LG G + P+ + L G+ ++ V+ G TH +ALT D + S+G D + +
Sbjct: 689 LGHGTEEHVR--YPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLR 746
Query: 324 VTTGQPMEVP 333
VT +P +P
Sbjct: 747 VTKPEPAALP 756
Score = 358 (131.1 bits), Expect = 1.0e-36, Sum P(2) = 1.0e-36
Identities = 99/320 (30%), Positives = 161/320 (50%)
Query: 61 TENIPSQVNALSNTKIVQAAI--GGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGR 118
T IP Q+ ALS+ + + A+ GG H A+ G+ ++WG + G+ G D R
Sbjct: 3032 TVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPR 3091
Query: 119 ILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----WPPGDIKQISVPV 174
++ + + +R +R +A G +HS LT G ++TWG GD P
Sbjct: 3092 LI--EALKTKR------IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3143
Query: 175 RVQGL--EQVKLIAVGA--FHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLS 230
V+ L +V +A G+ LAL ++G +++WG+ ++G+LG G ++ + P ++ L+
Sbjct: 3144 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3203
Query: 231 GLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQ 290
G + I G S ALT G V+ WG+G++ RLG G + K PQ V L G+ IV
Sbjct: 3204 GQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK--PQVVEGLRGKKIVH 3261
Query: 291 VSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRW 350
V+ G H +A+T G ++++G DHG+ G G +P V G++ +
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLV-----------QGLEGQK 3310
Query: 351 IAKLVACGGRHTLAIVEWQT 370
I + VACG H++A W T
Sbjct: 3311 ITR-VACGSSHSVA---WTT 3326
Score = 339 (124.4 bits), Expect = 5.7e-38, Sum P(2) = 5.7e-38
Identities = 84/261 (32%), Positives = 133/261 (50%)
Query: 84 WHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAA-G 142
W L+ G Y WG N GQ G K + +P C +R V G
Sbjct: 3944 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAK----------VKVPTPCEALATLRPVQLIG 3992
Query: 143 GTHSV-VLTREGHVWTWGQPWPP----GDIKQISVPVRVQGLEQV--KLIAV--GAFHNL 193
G ++ +T +G ++ G G + +S P ++ ++ V K +AV G H L
Sbjct: 3993 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCL 4052
Query: 194 ALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEV 253
AL +G +++WG E G+LG G+ P +P ++ L G+ +VD+AAGG HS +T G++
Sbjct: 4053 ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4112
Query: 254 YGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGG--THSVALTRDGHIFSFG 311
Y WG+G +GRLG D++ K P+ V L G +V ++CG ++ LT D ++S+G
Sbjct: 4113 YTWGKGRYGRLGHSDSEDQLK--PKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWG 4170
Query: 312 RGDHGRLGYGRKVTTGQPMEV 332
GD+G+LG G PM++
Sbjct: 4171 DGDYGKLGRGGSDGCKVPMKI 4191
Score = 329 (120.9 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
Identities = 98/316 (31%), Positives = 154/316 (48%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P Q L+N + Q A L + GR Y N DT L +
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS------------DT---LAPQL 486
Query: 125 VIPQRCAPKLIVRQVA-AGGTHSVVLTREGHVWTWG----------QPWPPGDIKQISVP 173
V Q A + IV+ A + G H + L G V++WG P + K IS
Sbjct: 487 V--QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAF 544
Query: 174 VRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLT 233
Q + V IA G+ ++ A+ +G L+ WG YG+LG G ++ + P+ V GL GL
Sbjct: 545 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 604
Query: 234 LVDIAAGGW--HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQV 291
++D+A G + A+T++G+V+ WG G++G+LG G +D P+ + L D+V+V
Sbjct: 605 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK--TPKLIEKLQDLDVVKV 662
Query: 292 SCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWI 351
CG S+ALT+DG ++S+G+GD+ RLG+G T + + P + +G+ + +
Sbjct: 663 RCGSQFSIALTKDGQVYSWGKGDNQRLGHG----TEEHVRYPKLL-------EGLQGKKV 711
Query: 352 AKLVACGGRHTLAIVE 367
VA G H LA+ E
Sbjct: 712 ID-VAAGSTHCLALTE 726
Score = 323 (118.8 bits), Expect = 2.8e-36, Sum P(2) = 2.8e-36
Identities = 93/268 (34%), Positives = 137/268 (51%)
Query: 113 KDDTGRILRRDIVIPQ--RCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPP--G-DI 167
KD G + I +P L V QVA G +T EG V+ G+ G I
Sbjct: 2969 KDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGI 3028
Query: 168 KQISVPV--RVQGLEQ--VKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS 221
+VP+ ++ L VK +AV G H AL DG +++WG + G+LG
Sbjct: 3029 SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCD 3088
Query: 222 QPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVN 281
+P ++ L + DIA G HS ALT GE+Y WG GE+GRLG GDN ++++ P+ V
Sbjct: 3089 KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN--TTQLKPKMVK 3146
Query: 282 LLAGEDIVQVSCGG--THSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
+L G ++QV+CG ++ALT +G +FS+G GD G+LG G + +P NI
Sbjct: 3147 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS----EGCNIPQNIE-- 3200
Query: 340 RNAGDGVDRRWIAKLVACGGRHTLAIVE 367
R G GV + + CG + +LA+ +
Sbjct: 3201 RLNGQGVCQ------IECGAQFSLALTK 3222
Score = 303 (111.7 bits), Expect = 5.3e-26, Sum P(3) = 5.3e-26
Identities = 82/266 (30%), Positives = 134/266 (50%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKT----- 61
+ +WG G+DG+LG + + +++AL+ ++R + GS +S A+ G+ T
Sbjct: 3068 VFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127
Query: 62 -------ENI----PSQVNALSNTKIVQAAIGGWHC--LAVDDQGRAYAWGGNEYGQCGE 108
+N P V L +++Q A G LA+ D+G ++WG ++G+ G
Sbjct: 3128 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG- 3186
Query: 109 EPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP--WPPGD 166
R G + ++I +R + + Q+ G S+ LT+ G VWTWG+ + G
Sbjct: 3187 ---RGGSEGCNIPQNI---ERLNGQGVC-QIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239
Query: 167 IKQISV--PVRVQGLEQVKLI--AVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ 222
+ V P V+GL K++ AVGA H LA+ + G ++AWG+N++GQ G G T +
Sbjct: 3240 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3299
Query: 223 PIPVQGLSGLTLVDIAAGGWHSTALT 248
P VQGL G + +A G HS A T
Sbjct: 3300 PTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 247 (92.0 bits), Expect = 3.4e-16, Sum P(2) = 3.4e-16
Identities = 69/254 (27%), Positives = 118/254 (46%)
Query: 57 GKTKTENIPSQVNALSNTK----IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPER 112
G T P ++A S + +V A G + A+ +G Y WG YG+ G
Sbjct: 530 GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSS- 588
Query: 113 KDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIK 168
+D+ +L + K+I +G ++ +T G VW+WG G
Sbjct: 589 EDEAIPMLVAGLK-----GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 643
Query: 169 QISVPVRVQGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPV 226
P ++ L+ + ++ V G+ ++AL +DG +++WG + +LG G + P +
Sbjct: 644 GCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLL 703
Query: 227 QGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGE 286
+GL G ++D+AAG H ALT+D EV+ WG + + F D + +K P + L +
Sbjct: 704 EGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HF-DTLRVTKPEPAALPGLDTK 761
Query: 287 DIVQVSCGGTHSVA 300
IV ++CG S A
Sbjct: 762 HIVGIACGPAQSFA 775
Score = 200 (75.5 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 61/211 (28%), Positives = 97/211 (45%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIGGWHC--LAVDDQGRAYAWGGNEYGQCGEEPERKD 114
G ++ E IP V L K++ A G LAV + G+ ++WG +YG+ G
Sbjct: 586 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 645
Query: 115 DTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG----QPWPPGDIKQI 170
T +++ + L V +V G S+ LT++G V++WG Q G + +
Sbjct: 646 KTPKLIEK--------LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHV 697
Query: 171 SVPVRVQGLEQVKLI--AVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQG 228
P ++GL+ K+I A G+ H LAL ED + +WG+N+ Q + +P + G
Sbjct: 698 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPG 757
Query: 229 LSGLTLVDIAAGGWHSTALTDDGEVYGWGRG 259
L +V IA G S A + E W G
Sbjct: 758 LDTKHIVGIACGPAQSFAWSSCSE---WSIG 785
Score = 194 (73.4 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 45/131 (34%), Positives = 71/131 (54%)
Query: 201 LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGE 260
++ WG N+ QLG P + LS L +V +A G A+T +G+VY G
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3020
Query: 261 HGRLGFGDNDKSSKMVPQKVNLLAGEDI--VQVSCGGTHSVALTRDGHIFSFGRGDHGRL 318
+GRLG G + + +P+++ L+ + V V GG H+ ALT DG +FS+G GD G+L
Sbjct: 3021 NGRLGLGISS-GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3079
Query: 319 GYGRKVTTGQP 329
G+ ++ +P
Sbjct: 3080 GHFSRMNCDKP 3090
Score = 194 (73.4 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 54/169 (31%), Positives = 83/169 (49%)
Query: 199 GALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGR 258
G ++ WG+N GQLG + P P + L+ L V + G A+T DG++Y G
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011
Query: 259 GEHGRLGFGDNDKSSKMVPQKVNLLAGEDI--VQVSCGGTHSVALTRDGHIFSFGRGDHG 316
G GRLG G + S P + + I V V+ GG H +AL+ +G ++S+G + G
Sbjct: 4012 GAGGRLGIGGTESVS--TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4069
Query: 317 RLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
+LG+G + P + P I + R + VD VA GG H+ +
Sbjct: 4070 KLGHGNR----SPCDRPRVIESLRGI-EVVD-------VAAGGAHSACV 4106
Score = 124 (48.7 bits), Expect = 5.7e-38, Sum P(2) = 5.7e-38
Identities = 32/114 (28%), Positives = 55/114 (48%)
Query: 9 AWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKT----KTEN- 63
+WG G+ G+LG G ++ + +++ L+ V V GS+ S+A+ DG+ K +N
Sbjct: 628 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQ 687
Query: 64 -----------IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQC 106
P + L K++ A G HCLA+ + ++WG N+ QC
Sbjct: 688 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QC 739
Score = 93 (37.8 bits), Expect = 1.0e-36, Sum P(2) = 1.0e-36
Identities = 28/99 (28%), Positives = 50/99 (50%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKT--ENI 64
+ +WG G++ +LG G E + +++ L+ KV V AGS + LA+ +D + + N
Sbjct: 678 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 737
Query: 65 PSQ-VNALSNTKIVQAAIGGW---HCLAVD-DQGRAYAW 98
Q + L TK AA+ G H + + +++AW
Sbjct: 738 QCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAW 776
Score = 91 (37.1 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNS--LAICDDG 57
+ S+ + WG GE G+LG G+N + +VK L ++V V GSR++ LA+ D+G
Sbjct: 3114 LTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3172
Score = 75 (31.5 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 1 MASTTS--IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLA 52
+A T S + AWG + GQ G G +V+ LE K+ V GS +S+A
Sbjct: 3270 LAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 58 (25.5 bits), Expect = 4.8e-31, Sum P(2) = 4.8e-31
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVC-VVKALEPYKVRSVV--AGSRNSLAICDDGK 58
+ A G +G+LG+G + + + AL Y V+ V +G R++ A+ DGK
Sbjct: 3013 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3067
Score = 49 (22.3 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 82 GGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDT 116
G W+ + D + + G E Q GE P RKDD+
Sbjct: 34 GLWNEMVKDGE---IVYTGTESTQNGELPPRKDDS 65
Score = 38 (18.4 bits), Expect = 2.9e-37, Sum P(2) = 2.9e-37
Identities = 7/10 (70%), Positives = 7/10 (70%)
Query: 9 AWGSGEDGQL 18
AW SGED L
Sbjct: 211 AWRSGEDADL 220
Score = 37 (18.1 bits), Expect = 5.3e-26, Sum P(3) = 5.3e-26
Identities = 6/8 (75%), Positives = 6/8 (75%)
Query: 250 DGEVYGWG 257
DG V GWG
Sbjct: 3694 DGSVNGWG 3701
>UNIPROTKB|D4ACN3 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 IPI:IPI00764717 Ensembl:ENSRNOT00000019245
ArrayExpress:D4ACN3 Uniprot:D4ACN3
Length = 4779
Score = 419 (152.6 bits), Expect = 2.3e-37, Sum P(2) = 2.3e-37
Identities = 116/393 (29%), Positives = 187/393 (47%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK------- 58
+I WG GQLG + + +AL + ++ G + A+ DGK
Sbjct: 3898 TIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYG 3957
Query: 59 ---------TKTENIPSQVNALSNTKIVQAAI--GGWHCLAVDDQGRAYAWGGNEYGQCG 107
T++ + P+ + ++ + I + A+ GG HCLA+ +G Y+WG E G+ G
Sbjct: 3958 AGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4017
Query: 108 EEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----WP 163
D R++ + V VAAGG HS +T G ++TWG+
Sbjct: 4018 HGNRSPCDRPRVIES--------LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4069
Query: 164 PGDIKQISVPVRVQGLEQVKLIAV----GAFHNLALQEDGALWAWGNNEYGQLGTGDTQP 219
D + P V+ L+ ++I + G L L +D +W+WG+ +YG+LG G +
Sbjct: 4070 HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4129
Query: 220 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 279
P+ + L+GL +V + G S ALT G VY WG+G++ RLG G +D + P++
Sbjct: 4130 CKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR--PRQ 4187
Query: 280 VNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
V L G+ ++ ++ G H V T DG ++++G D G+LG G T ++ P + A
Sbjct: 4188 VQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG----TTNAIQRPRLVAAL 4243
Query: 340 RNAGDGVDRRWIAKLVACGGRHTLAIVEWQTEE 372
+ G V+R VACG HTLA W T +
Sbjct: 4244 Q--GKKVNR------VACGSAHTLA---WSTSK 4265
Score = 367 (134.2 bits), Expect = 6.6e-32, Sum P(2) = 6.6e-32
Identities = 91/281 (32%), Positives = 152/281 (54%)
Query: 64 IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRD 123
+PS LS +VQ A G AV +G+ Y+ CGE + G +
Sbjct: 2926 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS--------CGEATNGRLGLG-MSSGT 2976
Query: 124 IVIPQRCAP--KLIVRQVA--AGGTHSVVLTREGHVWTWGQ--PWPPGDIKQISV--PVR 175
+ IP++ +V++VA +GG H+ LT +G V++WG+ G +++ P
Sbjct: 2977 VPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRL 3036
Query: 176 VQGLE--QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLT 233
++ L+ +++ IA G+ H+ AL G L+ WG EYG+LG GD + +P V+ L G
Sbjct: 3037 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR 3096
Query: 234 LVDIAAGGW--HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQV 291
++ +A G + ALTD+G V+ WG G+ G+LG G ++ + +PQ + L G+ + Q+
Sbjct: 3097 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN--IPQNIERLNGQGVCQI 3154
Query: 292 SCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
CG S+ALT+ G ++++G+GD+ RLG+G V +P V
Sbjct: 3155 ECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVV 3195
Score = 365 (133.5 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 93/310 (30%), Positives = 155/310 (50%)
Query: 40 VRSVVAGSRNSLAICDDGKTKTE--N----IPSQVNALSNTKIVQAAI--GGWHCLAVDD 91
V V + L + +G+ T+ N P V L++ IV+ A G H LA+
Sbjct: 399 VMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAA 458
Query: 92 QGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTR 151
G Y+WG + G+ G + +++ + A K +V +A G T+S +T
Sbjct: 459 TGEVYSWGCGDGGRLGHGDTVPLEEPKVIS---AFSGKQAGKHVVH-IACGSTYSAAITA 514
Query: 152 EGHVWTWGQP----WPPGDIKQISVPVRVQGLEQVKLIAV----GAFHNLALQEDGALWA 203
EG ++TWG+ G + ++P+ V GL+ +K+I V G LA+ E+G +W+
Sbjct: 515 EGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWS 574
Query: 204 WGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGR 263
WG+ +YG+LG G + P ++ L L ++ + G S ALT DG+VY WG+G++ R
Sbjct: 575 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 634
Query: 264 LGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRK 323
LG G + P+ + L G+ ++ V+ G TH +ALT D + S+G D + +
Sbjct: 635 LGHGTEEHVR--YPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLR 692
Query: 324 VTTGQPMEVP 333
VT +P +P
Sbjct: 693 VTKPEPTALP 702
Score = 358 (131.1 bits), Expect = 2.6e-36, Sum P(2) = 2.6e-36
Identities = 99/320 (30%), Positives = 161/320 (50%)
Query: 61 TENIPSQVNALSNTKIVQAAI--GGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGR 118
T IP Q+ ALS+ + + A+ GG H A+ G+ ++WG + G+ G D R
Sbjct: 2976 TVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPR 3035
Query: 119 ILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----WPPGDIKQISVPV 174
++ + + +R +R +A G +HS LT G ++TWG GD P
Sbjct: 3036 LI--EALKTKR------IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3087
Query: 175 RVQGL--EQVKLIAVGA--FHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLS 230
V+ L +V +A G+ LAL ++G +++WG+ ++G+LG G ++ + P ++ L+
Sbjct: 3088 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3147
Query: 231 GLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQ 290
G + I G S ALT G V+ WG+G++ RLG G + K PQ V L G+ IV
Sbjct: 3148 GQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK--PQVVEGLRGKKIVH 3205
Query: 291 VSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRW 350
V+ G H +A+T G ++++G DHG+ G G +P V G++ +
Sbjct: 3206 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLV-----------QGLEGQK 3254
Query: 351 IAKLVACGGRHTLAIVEWQT 370
I + VACG H++A W T
Sbjct: 3255 ITR-VACGSSHSVA---WTT 3270
Score = 338 (124.0 bits), Expect = 7.1e-38, Sum P(2) = 7.1e-38
Identities = 83/261 (31%), Positives = 133/261 (50%)
Query: 84 WHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAA-G 142
W L+ G Y WG N GQ G K + +P C +R V G
Sbjct: 3889 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAK----------VKVPTPCEALATLRPVQLIG 3937
Query: 143 GTHSV-VLTREGHVWTWGQPWPP----GDIKQISVPVRVQGLEQV--KLIAV--GAFHNL 193
G ++ +T +G ++ G G + +S P ++ ++ V K +AV G H L
Sbjct: 3938 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCL 3997
Query: 194 ALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEV 253
AL +G +++WG E G+LG G+ P +P ++ L G+ +VD+AAGG HS +T G++
Sbjct: 3998 ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4057
Query: 254 YGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGG--THSVALTRDGHIFSFG 311
Y WG+G +GRLG D++ K P+ V L G ++ ++CG ++ LT D ++S+G
Sbjct: 4058 YTWGKGRYGRLGHSDSEDQLK--PKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWG 4115
Query: 312 RGDHGRLGYGRKVTTGQPMEV 332
GD+G+LG G PM++
Sbjct: 4116 DGDYGKLGRGGSDGCKVPMKI 4136
Score = 338 (124.0 bits), Expect = 7.3e-29, Sum P(2) = 7.3e-29
Identities = 100/323 (30%), Positives = 154/323 (47%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVC-VVKALEPYKVRSVV--AGSRNSLAICDDGKT---- 59
+ + G +G+LG+G + + + AL Y V+ V +G R++ A+ DGK
Sbjct: 2957 VYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3016
Query: 60 -----KTENI-------PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 107
K + P + AL +I A G H A+ G Y WG EYG+ G
Sbjct: 3017 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3076
Query: 108 EEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGG--THSVVLTREGHVWTWGQ----P 161
D+T ++ + + + ++I QVA G ++ LT EG V++WG
Sbjct: 3077 HG----DNTTQLKPKMVKV--LLGHRVI--QVACGSRDAQTLALTDEGLVFSWGDGDFGK 3128
Query: 162 WPPGDIKQISVPVRVQGL--EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQP 219
G + ++P ++ L + V I GA +LAL + G +W WG +Y +LG G
Sbjct: 3129 LGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3188
Query: 220 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 279
+P V+GL G +V +A G H A+TD G+VY WG +HG+ G G + K P
Sbjct: 3189 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK--PTL 3246
Query: 280 VNLLAGEDIVQVSCGGTHSVALT 302
V L G+ I +V+CG +HSVA T
Sbjct: 3247 VQGLEGQKITRVACGSSHSVAWT 3269
Score = 325 (119.5 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 84/261 (32%), Positives = 139/261 (53%)
Query: 123 DIVIPQRC---APKLIVRQVA-AGGTHSVVLTREGHVWTWG----------QPWPPGDIK 168
D++ PQ A + IV+ A + G H + L G V++WG P + K
Sbjct: 426 DMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPK 485
Query: 169 QISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQG 228
IS Q + V IA G+ ++ A+ +G L+ WG YG+LG G ++ + P+ V G
Sbjct: 486 VISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAG 545
Query: 229 LSGLTLVDIAAGGW--HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGE 286
L GL ++D+A G + A+T++G+V+ WG G++G+LG G +D P+ + L
Sbjct: 546 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK--TPKLIEKLQDL 603
Query: 287 DIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGV 346
D+++V CG S+ALT+DG ++S+G+GD+ RLG+G T + + P + +G+
Sbjct: 604 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG----TEEHVRYPKLL-------EGL 652
Query: 347 DRRWIAKLVACGGRHTLAIVE 367
+ + VA G H LA+ E
Sbjct: 653 QGKKVID-VAAGSTHCLALTE 672
Score = 322 (118.4 bits), Expect = 3.4e-36, Sum P(2) = 3.4e-36
Identities = 91/269 (33%), Positives = 137/269 (50%)
Query: 113 KDDTGRILRRDIVIPQ--RCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIK-- 168
KD G + I +P L V QVA G +T EG V++ G+ G +
Sbjct: 2913 KDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEA-TNGRLGLG 2971
Query: 169 ----QISVPVRVQGLEQ--VKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPR 220
+ +P ++ L VK +AV G H AL DG +++WG + G+LG
Sbjct: 2972 MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC 3031
Query: 221 SQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV 280
+P ++ L + DIA G HS ALT GE+Y WG GE+GRLG GDN ++++ P+ V
Sbjct: 3032 DKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN--TTQLKPKMV 3089
Query: 281 NLLAGEDIVQVSCGG--THSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPA 338
+L G ++QV+CG ++ALT +G +FS+G GD G+LG G + +P NI
Sbjct: 3090 KVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS----EGCNIPQNIE- 3144
Query: 339 PRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
R G GV + + CG + +LA+ +
Sbjct: 3145 -RLNGQGVCQ------IECGAQFSLALTK 3166
Score = 248 (92.4 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 70/254 (27%), Positives = 118/254 (46%)
Query: 57 GKTKTENIPSQVNALSNTK----IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPER 112
G T P ++A S + +V A G + A+ +G Y WG YG+ G
Sbjct: 476 GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSS- 534
Query: 113 KDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIK 168
+D+ +L + K+I +G ++ +T G VW+WG G
Sbjct: 535 EDEAIPMLVAGLK-----GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 589
Query: 169 QISVPVRVQGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPV 226
P ++ L+ + +I V G+ ++AL +DG +++WG + +LG G + P +
Sbjct: 590 GCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLL 649
Query: 227 QGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGE 286
+GL G ++D+AAG H ALT+D EV+ WG + + F D + +K P + L +
Sbjct: 650 EGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HF-DTLRVTKPEPTALPGLDTK 707
Query: 287 DIVQVSCGGTHSVA 300
IV ++CG S A
Sbjct: 708 HIVGIACGPAQSFA 721
Score = 200 (75.5 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 61/211 (28%), Positives = 97/211 (45%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIGGWHC--LAVDDQGRAYAWGGNEYGQCGEEPERKD 114
G ++ E IP V L K++ A G LAV + G+ ++WG +YG+ G
Sbjct: 532 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 591
Query: 115 DTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG----QPWPPGDIKQI 170
T +++ + L V +V G S+ LT++G V++WG Q G + +
Sbjct: 592 KTPKLIEK--------LQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHV 643
Query: 171 SVPVRVQGLEQVKLI--AVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQG 228
P ++GL+ K+I A G+ H LAL ED + +WG+N+ Q + +P + G
Sbjct: 644 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALPG 703
Query: 229 LSGLTLVDIAAGGWHSTALTDDGEVYGWGRG 259
L +V IA G S A + E W G
Sbjct: 704 LDTKHIVGIACGPAQSFAWSSCSE---WSIG 731
Score = 194 (73.4 bits), Expect = 9.9e-19, Sum P(2) = 9.9e-19
Identities = 45/131 (34%), Positives = 71/131 (54%)
Query: 201 LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGE 260
++ WG N+ QLG P + LS L +V +A G A+T +G+VY G
Sbjct: 2905 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 2964
Query: 261 HGRLGFGDNDKSSKMVPQKVNLLAGEDI--VQVSCGGTHSVALTRDGHIFSFGRGDHGRL 318
+GRLG G + + +P+++ L+ + V V GG H+ ALT DG +FS+G GD G+L
Sbjct: 2965 NGRLGLGMSS-GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3023
Query: 319 GYGRKVTTGQP 329
G+ ++ +P
Sbjct: 3024 GHFSRMNCDKP 3034
Score = 194 (73.4 bits), Expect = 9.9e-19, Sum P(2) = 9.9e-19
Identities = 54/169 (31%), Positives = 83/169 (49%)
Query: 199 GALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGR 258
G ++ WG+N GQLG + P P + L+ L V + G A+T DG++Y G
Sbjct: 3897 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3956
Query: 259 GEHGRLGFGDNDKSSKMVPQKVNLLAGEDI--VQVSCGGTHSVALTRDGHIFSFGRGDHG 316
G GRLG G + S P + + I V V+ GG H +AL+ +G ++S+G + G
Sbjct: 3957 GAGGRLGIGGTESVS--TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4014
Query: 317 RLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
+LG+G + P + P I + R + VD VA GG H+ +
Sbjct: 4015 KLGHGNR----SPCDRPRVIESLRGI-EVVD-------VAAGGAHSACV 4051
Score = 124 (48.7 bits), Expect = 7.1e-38, Sum P(2) = 7.1e-38
Identities = 32/114 (28%), Positives = 55/114 (48%)
Query: 9 AWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKT----KTEN- 63
+WG G+ G+LG G ++ + +++ L+ V V GS+ S+A+ DG+ K +N
Sbjct: 574 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQ 633
Query: 64 -----------IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQC 106
P + L K++ A G HCLA+ + ++WG N+ QC
Sbjct: 634 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QC 685
Score = 107 (42.7 bits), Expect = 5.8e-17, Sum P(2) = 5.8e-17
Identities = 49/179 (27%), Positives = 76/179 (42%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNN---EEREWVCVVKALEPYK-VRSVVAGSRNSLAICDD 56
+A+T + +WG G+ G+LG G+ EE + + + K V + GS S AI +
Sbjct: 456 LAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 515
Query: 57 GKTKT---ENIPSQVNALSNTKIVQAAIGGWHCLAVDD----QGRAYAWGGNEYGQCGEE 109
G+ T N + S + + + G L V D G A E GQ
Sbjct: 516 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 575
Query: 110 PERKDDTGRILRRDIVIPQRC-APKLI-------VRQVAAGGTHSVVLTREGHVWTWGQ 160
+ D G++ R C PKLI V +V G S+ LT++G V++WG+
Sbjct: 576 GD--GDYGKLGRGG---SDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGK 629
Score = 91 (37.1 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNS--LAICDDG 57
+ S+ + WG GE G+LG G+N + +VK L ++V V GSR++ LA+ D+G
Sbjct: 3058 LTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3116
Score = 89 (36.4 bits), Expect = 2.6e-36, Sum P(2) = 2.6e-36
Identities = 27/99 (27%), Positives = 49/99 (49%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKT--ENI 64
+ +WG G++ +LG G E + +++ L+ KV V AGS + LA+ +D + + N
Sbjct: 624 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 683
Query: 65 PSQ-VNALSNTKIVQAAIGGW---HCLAVD-DQGRAYAW 98
Q + L TK A+ G H + + +++AW
Sbjct: 684 QCQHFDTLRVTKPEPTALPGLDTKHIVGIACGPAQSFAW 722
Score = 75 (31.5 bits), Expect = 9.8e-33, Sum P(2) = 9.8e-33
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 1 MASTTS--IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLA 52
+A T S + AWG + GQ G G +V+ LE K+ V GS +S+A
Sbjct: 3214 LAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3267
Score = 38 (18.4 bits), Expect = 2.3e-37, Sum P(2) = 2.3e-37
Identities = 7/10 (70%), Positives = 7/10 (70%)
Query: 9 AWGSGEDGQL 18
AW SGED L
Sbjct: 157 AWRSGEDADL 166
Score = 37 (18.1 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 6/8 (75%), Positives = 6/8 (75%)
Query: 250 DGEVYGWG 257
DG V GWG
Sbjct: 3639 DGSVNGWG 3646
>MGI|MGI:103234 [details] [associations]
symbol:Herc2 "hect (homologous to the E6-AP (UBE3A) carboxyl
terminus) domain and RCC1 (CHC1)-like domain (RLD) 2" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006281
"DNA repair" evidence=ISO] [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0032183 "SUMO binding" evidence=ISO] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
MGI:MGI:103234 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005814 PROSITE:PS00678 GO:GO:0005743 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0007283 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00700000104208 CTD:8924 KO:K10595
OMA:QLAFTRD HOVERGEN:HBG081598 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 EMBL:AF061529 EMBL:AF071173 EMBL:AC102121
EMBL:AC102150 EMBL:AK141515 EMBL:AK148361 EMBL:AK161826
EMBL:AK162270 EMBL:AK162708 EMBL:AK220338 EMBL:BC044667
EMBL:BC054829 IPI:IPI00309574 IPI:IPI00314989 RefSeq:NP_034548.2
UniGene:Mm.20929 ProteinModelPortal:Q4U2R1 SMR:Q4U2R1 STRING:Q4U2R1
PhosphoSite:Q4U2R1 PaxDb:Q4U2R1 PRIDE:Q4U2R1
Ensembl:ENSMUST00000076226 Ensembl:ENSMUST00000164095 GeneID:15204
KEGG:mmu:15204 UCSC:uc009hdv.1 InParanoid:Q4U2R1 ChiTaRS:HERC2
NextBio:287753 Bgee:Q4U2R1 Genevestigator:Q4U2R1
GermOnline:ENSMUSG00000030451 Uniprot:Q4U2R1
Length = 4836
Score = 419 (152.6 bits), Expect = 2.3e-37, Sum P(2) = 2.3e-37
Identities = 116/393 (29%), Positives = 187/393 (47%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK------- 58
+I WG GQLG + + +AL + ++ G + A+ DGK
Sbjct: 3955 TIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYG 4014
Query: 59 ---------TKTENIPSQVNALSNTKIVQAAI--GGWHCLAVDDQGRAYAWGGNEYGQCG 107
T++ + P+ + ++ + I + A+ GG HCLA+ +G Y+WG E G+ G
Sbjct: 4015 AGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4074
Query: 108 EEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----WP 163
D R++ + V VAAGG HS +T G ++TWG+
Sbjct: 4075 HGNRSPCDRPRVIES--------LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4126
Query: 164 PGDIKQISVPVRVQGLEQVKLIAV----GAFHNLALQEDGALWAWGNNEYGQLGTGDTQP 219
D + P V+ L+ ++I + G L L +D +W+WG+ +YG+LG G +
Sbjct: 4127 HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4186
Query: 220 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 279
P+ + L+GL +V + G S ALT G VY WG+G++ RLG G +D + P++
Sbjct: 4187 CKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR--PRQ 4244
Query: 280 VNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
V L G+ ++ ++ G H V T DG ++++G D G+LG G T ++ P + A
Sbjct: 4245 VQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG----TTNAIQRPRLVAAL 4300
Query: 340 RNAGDGVDRRWIAKLVACGGRHTLAIVEWQTEE 372
+ G V+R VACG HTLA W T +
Sbjct: 4301 Q--GKKVNR------VACGSAHTLA---WSTSK 4322
Score = 367 (134.2 bits), Expect = 6.8e-32, Sum P(2) = 6.8e-32
Identities = 91/281 (32%), Positives = 152/281 (54%)
Query: 64 IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRD 123
+PS LS +VQ A G AV +G+ Y+ CGE + G +
Sbjct: 2983 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS--------CGEATNGRLGLG-MSSGT 3033
Query: 124 IVIPQRCAP--KLIVRQVA--AGGTHSVVLTREGHVWTWGQ--PWPPGDIKQISV--PVR 175
+ IP++ +V++VA +GG H+ LT +G V++WG+ G +++ P
Sbjct: 3034 VPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRL 3093
Query: 176 VQGLE--QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLT 233
++ L+ +++ IA G+ H+ AL G L+ WG EYG+LG GD + +P V+ L G
Sbjct: 3094 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR 3153
Query: 234 LVDIAAGGW--HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQV 291
++ +A G + ALTD+G V+ WG G+ G+LG G ++ + +PQ + L G+ + Q+
Sbjct: 3154 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN--IPQNIERLNGQGVCQI 3211
Query: 292 SCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
CG S+ALT+ G ++++G+GD+ RLG+G V +P V
Sbjct: 3212 ECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVV 3252
Score = 365 (133.5 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 93/310 (30%), Positives = 155/310 (50%)
Query: 40 VRSVVAGSRNSLAICDDGKTKTE--N----IPSQVNALSNTKIVQAAI--GGWHCLAVDD 91
V V + L + +G+ T+ N P V L++ IV+ A G H LA+
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAA 513
Query: 92 QGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTR 151
G Y+WG + G+ G + +++ + A K +V +A G T+S +T
Sbjct: 514 TGEVYSWGCGDGGRLGHGDTVPLEEPKVIS---AFSGKQAGKHVVH-IACGSTYSAAITA 569
Query: 152 EGHVWTWGQP----WPPGDIKQISVPVRVQGLEQVKLIAV----GAFHNLALQEDGALWA 203
EG ++TWG+ G + ++P+ V GL+ +K+I V G LA+ E+G +W+
Sbjct: 570 EGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWS 629
Query: 204 WGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGR 263
WG+ +YG+LG G + P ++ L L ++ + G S ALT DG+VY WG+G++ R
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 264 LGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRK 323
LG G + P+ + L G+ ++ V+ G TH +ALT D + S+G D + +
Sbjct: 690 LGHGTEEHVR--YPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLR 747
Query: 324 VTTGQPMEVP 333
VT +P +P
Sbjct: 748 VTKPEPTALP 757
Score = 358 (131.1 bits), Expect = 2.7e-36, Sum P(2) = 2.7e-36
Identities = 99/320 (30%), Positives = 161/320 (50%)
Query: 61 TENIPSQVNALSNTKIVQAAI--GGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGR 118
T IP Q+ ALS+ + + A+ GG H A+ G+ ++WG + G+ G D R
Sbjct: 3033 TVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPR 3092
Query: 119 ILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----WPPGDIKQISVPV 174
++ + + +R +R +A G +HS LT G ++TWG GD P
Sbjct: 3093 LI--EALKTKR------IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3144
Query: 175 RVQGL--EQVKLIAVGA--FHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLS 230
V+ L +V +A G+ LAL ++G +++WG+ ++G+LG G ++ + P ++ L+
Sbjct: 3145 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3204
Query: 231 GLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQ 290
G + I G S ALT G V+ WG+G++ RLG G + K PQ V L G+ IV
Sbjct: 3205 GQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK--PQVVEGLRGKKIVH 3262
Query: 291 VSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRW 350
V+ G H +A+T G ++++G DHG+ G G +P V G++ +
Sbjct: 3263 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLV-----------QGLEGQK 3311
Query: 351 IAKLVACGGRHTLAIVEWQT 370
I + VACG H++A W T
Sbjct: 3312 ITR-VACGSSHSVA---WTT 3327
Score = 338 (124.0 bits), Expect = 7.3e-38, Sum P(2) = 7.3e-38
Identities = 83/261 (31%), Positives = 133/261 (50%)
Query: 84 WHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAA-G 142
W L+ G Y WG N GQ G K + +P C +R V G
Sbjct: 3946 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAK----------VKVPTPCEALATLRPVQLIG 3994
Query: 143 GTHSV-VLTREGHVWTWGQPWPP----GDIKQISVPVRVQGLEQV--KLIAV--GAFHNL 193
G ++ +T +G ++ G G + +S P ++ ++ V K +AV G H L
Sbjct: 3995 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCL 4054
Query: 194 ALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEV 253
AL +G +++WG E G+LG G+ P +P ++ L G+ +VD+AAGG HS +T G++
Sbjct: 4055 ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4114
Query: 254 YGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGG--THSVALTRDGHIFSFG 311
Y WG+G +GRLG D++ K P+ V L G ++ ++CG ++ LT D ++S+G
Sbjct: 4115 YTWGKGRYGRLGHSDSEDQLK--PKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWG 4172
Query: 312 RGDHGRLGYGRKVTTGQPMEV 332
GD+G+LG G PM++
Sbjct: 4173 DGDYGKLGRGGSDGCKVPMKI 4193
Score = 338 (124.0 bits), Expect = 7.5e-29, Sum P(2) = 7.5e-29
Identities = 100/323 (30%), Positives = 154/323 (47%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVC-VVKALEPYKVRSVV--AGSRNSLAICDDGKT---- 59
+ + G +G+LG+G + + + AL Y V+ V +G R++ A+ DGK
Sbjct: 3014 VYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3073
Query: 60 -----KTENI-------PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 107
K + P + AL +I A G H A+ G Y WG EYG+ G
Sbjct: 3074 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3133
Query: 108 EEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGG--THSVVLTREGHVWTWGQ----P 161
D+T ++ + + + ++I QVA G ++ LT EG V++WG
Sbjct: 3134 HG----DNTTQLKPKMVKV--LLGHRVI--QVACGSRDAQTLALTDEGLVFSWGDGDFGK 3185
Query: 162 WPPGDIKQISVPVRVQGL--EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQP 219
G + ++P ++ L + V I GA +LAL + G +W WG +Y +LG G
Sbjct: 3186 LGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245
Query: 220 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 279
+P V+GL G +V +A G H A+TD G+VY WG +HG+ G G + K P
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK--PTL 3303
Query: 280 VNLLAGEDIVQVSCGGTHSVALT 302
V L G+ I +V+CG +HSVA T
Sbjct: 3304 VQGLEGQKITRVACGSSHSVAWT 3326
Score = 325 (119.5 bits), Expect = 8.5e-28, Sum P(2) = 8.5e-28
Identities = 84/261 (32%), Positives = 139/261 (53%)
Query: 123 DIVIPQRC---APKLIVRQVA-AGGTHSVVLTREGHVWTWG----------QPWPPGDIK 168
D++ PQ A + IV+ A + G H + L G V++WG P + K
Sbjct: 481 DMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPK 540
Query: 169 QISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQG 228
IS Q + V IA G+ ++ A+ +G L+ WG YG+LG G ++ + P+ V G
Sbjct: 541 VISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAG 600
Query: 229 LSGLTLVDIAAGGW--HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGE 286
L GL ++D+A G + A+T++G+V+ WG G++G+LG G +D P+ + L
Sbjct: 601 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK--TPKLIEKLQDL 658
Query: 287 DIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGV 346
D+++V CG S+ALT+DG ++S+G+GD+ RLG+G T + + P + +G+
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG----TEEHVRYPKLL-------EGL 707
Query: 347 DRRWIAKLVACGGRHTLAIVE 367
+ + VA G H LA+ E
Sbjct: 708 QGKKVID-VAAGSTHCLALTE 727
Score = 322 (118.4 bits), Expect = 3.5e-36, Sum P(2) = 3.5e-36
Identities = 91/269 (33%), Positives = 137/269 (50%)
Query: 113 KDDTGRILRRDIVIPQ--RCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIK-- 168
KD G + I +P L V QVA G +T EG V++ G+ G +
Sbjct: 2970 KDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEA-TNGRLGLG 3028
Query: 169 ----QISVPVRVQGLEQ--VKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPR 220
+ +P ++ L VK +AV G H AL DG +++WG + G+LG
Sbjct: 3029 MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC 3088
Query: 221 SQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV 280
+P ++ L + DIA G HS ALT GE+Y WG GE+GRLG GDN ++++ P+ V
Sbjct: 3089 DKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN--TTQLKPKMV 3146
Query: 281 NLLAGEDIVQVSCGG--THSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPA 338
+L G ++QV+CG ++ALT +G +FS+G GD G+LG G + +P NI
Sbjct: 3147 KVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS----EGCNIPQNIE- 3201
Query: 339 PRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
R G GV + + CG + +LA+ +
Sbjct: 3202 -RLNGQGVCQ------IECGAQFSLALTK 3223
Score = 250 (93.1 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 70/254 (27%), Positives = 118/254 (46%)
Query: 57 GKTKTENIPSQVNALSNTK----IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPER 112
G T P ++A S + +V A G + A+ +G Y WG YG+ G
Sbjct: 531 GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSS- 589
Query: 113 KDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIK 168
+D+ +L + K+I +G ++ +T G VW+WG G
Sbjct: 590 EDEAIPMLVAGLK-----GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 644
Query: 169 QISVPVRVQGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPV 226
P ++ L+ + +I V G+ ++AL +DG +++WG + +LG G + P +
Sbjct: 645 GCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLL 704
Query: 227 QGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGE 286
+GL G ++D+AAG H ALT+D EV+ WG + + F D + +K P + L +
Sbjct: 705 EGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HF-DTLRVTKPEPTALPGLDSK 762
Query: 287 DIVQVSCGGTHSVA 300
IV ++CG S A
Sbjct: 763 HIVGIACGPAQSFA 776
Score = 202 (76.2 bits), Expect = 7.8e-10, Sum P(3) = 7.8e-10
Identities = 61/211 (28%), Positives = 97/211 (45%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIGGWHC--LAVDDQGRAYAWGGNEYGQCGEEPERKD 114
G ++ E IP V L K++ A G LAV + G+ ++WG +YG+ G
Sbjct: 587 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 646
Query: 115 DTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG----QPWPPGDIKQI 170
T +++ + L V +V G S+ LT++G V++WG Q G + +
Sbjct: 647 KTPKLIEK--------LQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHV 698
Query: 171 SVPVRVQGLEQVKLI--AVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQG 228
P ++GL+ K+I A G+ H LAL ED + +WG+N+ Q + +P + G
Sbjct: 699 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALPG 758
Query: 229 LSGLTLVDIAAGGWHSTALTDDGEVYGWGRG 259
L +V IA G S A + E W G
Sbjct: 759 LDSKHIVGIACGPAQSFAWSSCSE---WSIG 786
Score = 194 (73.4 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 45/131 (34%), Positives = 71/131 (54%)
Query: 201 LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGE 260
++ WG N+ QLG P + LS L +V +A G A+T +G+VY G
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 3021
Query: 261 HGRLGFGDNDKSSKMVPQKVNLLAGEDI--VQVSCGGTHSVALTRDGHIFSFGRGDHGRL 318
+GRLG G + + +P+++ L+ + V V GG H+ ALT DG +FS+G GD G+L
Sbjct: 3022 NGRLGLGMSS-GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080
Query: 319 GYGRKVTTGQP 329
G+ ++ +P
Sbjct: 3081 GHFSRMNCDKP 3091
Score = 194 (73.4 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 54/169 (31%), Positives = 83/169 (49%)
Query: 199 GALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGR 258
G ++ WG+N GQLG + P P + L+ L V + G A+T DG++Y G
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4013
Query: 259 GEHGRLGFGDNDKSSKMVPQKVNLLAGEDI--VQVSCGGTHSVALTRDGHIFSFGRGDHG 316
G GRLG G + S P + + I V V+ GG H +AL+ +G ++S+G + G
Sbjct: 4014 GAGGRLGIGGTESVS--TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4071
Query: 317 RLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
+LG+G + P + P I + R + VD VA GG H+ +
Sbjct: 4072 KLGHGNR----SPCDRPRVIESLRGI-EVVD-------VAAGGAHSACV 4108
Score = 124 (48.7 bits), Expect = 7.3e-38, Sum P(2) = 7.3e-38
Identities = 32/114 (28%), Positives = 55/114 (48%)
Query: 9 AWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKT----KTEN- 63
+WG G+ G+LG G ++ + +++ L+ V V GS+ S+A+ DG+ K +N
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQ 688
Query: 64 -----------IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQC 106
P + L K++ A G HCLA+ + ++WG N+ QC
Sbjct: 689 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QC 740
Score = 107 (42.7 bits), Expect = 6.0e-17, Sum P(2) = 6.0e-17
Identities = 49/179 (27%), Positives = 76/179 (42%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNN---EEREWVCVVKALEPYK-VRSVVAGSRNSLAICDD 56
+A+T + +WG G+ G+LG G+ EE + + + K V + GS S AI +
Sbjct: 511 LAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 570
Query: 57 GKTKT---ENIPSQVNALSNTKIVQAAIGGWHCLAVDD----QGRAYAWGGNEYGQCGEE 109
G+ T N + S + + + G L V D G A E GQ
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630
Query: 110 PERKDDTGRILRRDIVIPQRC-APKLI-------VRQVAAGGTHSVVLTREGHVWTWGQ 160
+ D G++ R C PKLI V +V G S+ LT++G V++WG+
Sbjct: 631 GD--GDYGKLGRGG---SDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGK 684
Score = 91 (37.1 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNS--LAICDDG 57
+ S+ + WG GE G+LG G+N + +VK L ++V V GSR++ LA+ D+G
Sbjct: 3115 LTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3173
Score = 89 (36.4 bits), Expect = 2.7e-36, Sum P(2) = 2.7e-36
Identities = 27/99 (27%), Positives = 49/99 (49%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKT--ENI 64
+ +WG G++ +LG G E + +++ L+ KV V AGS + LA+ +D + + N
Sbjct: 679 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Query: 65 PSQ-VNALSNTKIVQAAIGGW---HCLAVD-DQGRAYAW 98
Q + L TK A+ G H + + +++AW
Sbjct: 739 QCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFAW 777
Score = 75 (31.5 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 1 MASTTS--IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLA 52
+A T S + AWG + GQ G G +V+ LE K+ V GS +S+A
Sbjct: 3271 LAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 41 (19.5 bits), Expect = 8.5e-28, Sum P(2) = 8.5e-28
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 82 GGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDD 115
G W+ + D + + G E Q E P RKDD
Sbjct: 34 GLWNEMVKDGE---IVYTGTELAQNRELPLRKDD 64
Score = 38 (18.4 bits), Expect = 2.3e-37, Sum P(2) = 2.3e-37
Identities = 7/10 (70%), Positives = 7/10 (70%)
Query: 9 AWGSGEDGQL 18
AW SGED L
Sbjct: 212 AWRSGEDADL 221
Score = 37 (18.1 bits), Expect = 7.8e-10, Sum P(3) = 7.8e-10
Identities = 6/8 (75%), Positives = 6/8 (75%)
Query: 250 DGEVYGWG 257
DG V GWG
Sbjct: 3696 DGSVNGWG 3703
>UNIPROTKB|G3MX12 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0020037 "heme binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872 GO:GO:0008270
GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:DAAA02003804 EMBL:DAAA02003805 Ensembl:ENSBTAT00000063010
Uniprot:G3MX12
Length = 4757
Score = 415 (151.1 bits), Expect = 5.9e-37, Sum P(2) = 5.9e-37
Identities = 116/393 (29%), Positives = 188/393 (47%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK------- 58
+I WG GQLG + + +AL + ++ G + A+ DGK
Sbjct: 3876 TIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGYG 3935
Query: 59 ---------TKTENIPSQVNALSNTKIVQAAI--GGWHCLAVDDQGRAYAWGGNEYGQCG 107
T++ + P+ + ++ + I + A+ GG HCLA+ +G Y+WG E G+ G
Sbjct: 3936 AGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3995
Query: 108 EEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----WP 163
D R VI +++ VAAGG HS +T G ++TWG+
Sbjct: 3996 HGNRSPCDRPR------VIESLRGTEVV--DVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4047
Query: 164 PGDIKQISVPVRVQGLEQVKLIAV----GAFHNLALQEDGALWAWGNNEYGQLGTGDTQP 219
D + P V+ L+ +++ V G L L +D +W+WG+ +YG+LG G +
Sbjct: 4048 HSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4107
Query: 220 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 279
P+ + L+GL +V + G S ALT G VY WG+G++ RLG G +D + P++
Sbjct: 4108 CKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR--PRQ 4165
Query: 280 VNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
V L G+ ++ ++ G H V + DG ++++G D G+LG G T ++ P + A
Sbjct: 4166 VQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDG----TTNAIQRPRLVAAL 4221
Query: 340 RNAGDGVDRRWIAKLVACGGRHTLAIVEWQTEE 372
+ G V+R VACG HTLA W T +
Sbjct: 4222 Q--GKKVNR------VACGSAHTLA---WSTSK 4243
Score = 373 (136.4 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 93/281 (33%), Positives = 152/281 (54%)
Query: 64 IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRD 123
+PS LS +VQ A G AV +G+ YA CGE + G I
Sbjct: 2903 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA--------CGEATNGRLGLG-ISSGT 2953
Query: 124 IVIPQRCAP--KLIVRQVA--AGGTHSVVLTREGHVWTWGQ--PWPPGDIKQISV--PVR 175
+ IP++ +V++VA +GG H+ LT +G V++WG+ G +++ P
Sbjct: 2954 VPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRL 3013
Query: 176 VQGLE--QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLT 233
++ L+ +++ IA G+ H+ AL G L+ WG EYG+LG GD + +P V+ L G
Sbjct: 3014 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR 3073
Query: 234 LVDIAAGGW--HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQV 291
++ +A G + ALTD+G V+ WG G+ G+LG G ++ + +PQ + L G+ + Q+
Sbjct: 3074 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN--IPQNIERLNGQGVCQI 3131
Query: 292 SCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
CG S+ALT+ G ++++G+GD+ RLG+G V +P V
Sbjct: 3132 ECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVV 3172
Score = 366 (133.9 bits), Expect = 8.3e-32, Sum P(2) = 8.3e-32
Identities = 93/310 (30%), Positives = 155/310 (50%)
Query: 40 VRSVVAGSRNSLAICDDGKTKTE--N----IPSQVNALSNTKIVQAAI--GGWHCLAVDD 91
V + + L + +G+ T+ N P V L++ IV+ A G H LA+
Sbjct: 364 VTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA 423
Query: 92 QGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTR 151
G Y+WG + G+ G + +++ + A K +V +A G T+S +T
Sbjct: 424 TGEVYSWGCGDGGRLGHGDTVPLEEPKVIS---AFSGKQAGKHVVH-IACGSTYSAAITA 479
Query: 152 EGHVWTWGQP----WPPGDIKQISVPVRVQGLEQVKLIAV----GAFHNLALQEDGALWA 203
EG ++TWG+ G + ++P+ V GL+ +K+I V G LA+ E+G +W+
Sbjct: 480 EGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWS 539
Query: 204 WGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGR 263
WG+ +YG+LG G + P ++ L L +V + G S ALT DG+VY WG+G++ R
Sbjct: 540 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQR 599
Query: 264 LGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRK 323
LG G + P+ + L G+ ++ V+ G TH +ALT D + S+G D + +
Sbjct: 600 LGHGTEEHVR--YPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLR 657
Query: 324 VTTGQPMEVP 333
VT +P +P
Sbjct: 658 VTKPEPSALP 667
Score = 356 (130.4 bits), Expect = 3.3e-36, Sum P(2) = 3.3e-36
Identities = 99/320 (30%), Positives = 161/320 (50%)
Query: 61 TENIPSQVNALSNTKIVQAAI--GGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGR 118
T IP Q+ ALS+ + + A+ GG H A+ G+ ++WG + G+ G D R
Sbjct: 2953 TVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPR 3012
Query: 119 ILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----WPPGDIKQISVPV 174
++ + + +R +R +A G +HS LT G ++TWG GD P
Sbjct: 3013 LI--EALKTKR------IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3064
Query: 175 RVQGL--EQVKLIAVGA--FHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLS 230
V+ L +V +A G+ LAL ++G +++WG+ ++G+LG G ++ + P ++ L+
Sbjct: 3065 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3124
Query: 231 GLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQ 290
G + I G S ALT G V+ WG+G++ RLG G + K PQ V L G+ IV
Sbjct: 3125 GQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK--PQVVEGLRGKKIVH 3182
Query: 291 VSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRW 350
V+ G H +A+T G ++++G DHG+ G G +P V G++ +
Sbjct: 3183 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLV-----------QGLEGQK 3231
Query: 351 IAKLVACGGRHTLAIVEWQT 370
I + VACG H++A W T
Sbjct: 3232 ITR-VACGSSHSVA---WTT 3247
Score = 338 (124.0 bits), Expect = 8.9e-38, Sum P(2) = 8.9e-38
Identities = 85/261 (32%), Positives = 132/261 (50%)
Query: 84 WHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAA-G 142
W L+ G Y WG N GQ G K + +P C +R V G
Sbjct: 3867 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAK----------VKVPTPCEALAALRPVQLIG 3915
Query: 143 GTHSV-VLTREGHVWTWGQP----WPPGDIKQISVPVRVQGLEQV--KLIAV--GAFHNL 193
G ++ +T +G ++ G G + +S P ++ ++ V K +AV G H L
Sbjct: 3916 GEQTLFAVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCL 3975
Query: 194 ALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEV 253
AL +G +++WG E G+LG G+ P +P ++ L G +VD+AAGG HS +T G++
Sbjct: 3976 ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDL 4035
Query: 254 YGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGG--THSVALTRDGHIFSFG 311
Y WG+G +GRLG D++ K P+ V L G +V V+CG ++ LT D ++S+G
Sbjct: 4036 YTWGKGRYGRLGHSDSEDQLK--PKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWG 4093
Query: 312 RGDHGRLGYGRKVTTGQPMEV 332
GD+G+LG G PM++
Sbjct: 4094 DGDYGKLGRGGSDGCKVPMKI 4114
Score = 330 (121.2 bits), Expect = 5.0e-28, Sum P(2) = 5.0e-28
Identities = 99/316 (31%), Positives = 154/316 (48%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P Q L+N + Q A L + GR Y N DT L +
Sbjct: 353 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS------------DT---LAPQL 397
Query: 125 VIPQRCAPKLIVRQVA-AGGTHSVVLTREGHVWTWG----------QPWPPGDIKQISVP 173
V Q A + IV+ A + G H + L G V++WG P + K IS
Sbjct: 398 V--QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAF 455
Query: 174 VRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLT 233
Q + V IA G+ ++ A+ +G L+ WG YG+LG G ++ + P+ V GL GL
Sbjct: 456 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 515
Query: 234 LVDIAAGGW--HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQV 291
++D+A G + A+T++G+V+ WG G++G+LG G +D P+ + L D+V+V
Sbjct: 516 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK--TPKLIEKLQDLDVVKV 573
Query: 292 SCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWI 351
CG SVALT+DG ++S+G+GD+ RLG+G T + + P + +G+ + +
Sbjct: 574 RCGSQFSVALTKDGQVYSWGKGDNQRLGHG----TEEHVRYPKLL-------EGLQGKKV 622
Query: 352 AKLVACGGRHTLAIVE 367
VA G H LA+ E
Sbjct: 623 ID-VAAGSTHCLALTE 637
Score = 323 (118.8 bits), Expect = 3.4e-36, Sum P(2) = 3.4e-36
Identities = 93/268 (34%), Positives = 137/268 (51%)
Query: 113 KDDTGRILRRDIVIPQ--RCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPP--G-DI 167
KD G + I +P L V QVA G +T EG V+ G+ G I
Sbjct: 2890 KDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGI 2949
Query: 168 KQISVPV--RVQGLEQ--VKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS 221
+VP+ ++ L VK +AV G H AL DG +++WG + G+LG
Sbjct: 2950 SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCD 3009
Query: 222 QPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVN 281
+P ++ L + DIA G HS ALT GE+Y WG GE+GRLG GDN ++++ P+ V
Sbjct: 3010 KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN--TTQLKPKMVK 3067
Query: 282 LLAGEDIVQVSCGG--THSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
+L G ++QV+CG ++ALT +G +FS+G GD G+LG G + +P NI
Sbjct: 3068 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS----EGCNIPQNIE-- 3121
Query: 340 RNAGDGVDRRWIAKLVACGGRHTLAIVE 367
R G GV + + CG + +LA+ +
Sbjct: 3122 RLNGQGVCQ------IECGAQFSLALTK 3143
Score = 301 (111.0 bits), Expect = 8.1e-26, Sum P(3) = 8.1e-26
Identities = 82/266 (30%), Positives = 134/266 (50%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKT----- 61
+ +WG G+DG+LG + + +++AL+ ++R + GS +S A+ G+ T
Sbjct: 2989 VFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3048
Query: 62 -------ENI----PSQVNALSNTKIVQAAIGGWHC--LAVDDQGRAYAWGGNEYGQCGE 108
+N P V L +++Q A G LA+ D+G ++WG ++G+ G
Sbjct: 3049 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG- 3107
Query: 109 EPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP--WPPGD 166
R G + ++I +R + + Q+ G S+ LT+ G VWTWG+ + G
Sbjct: 3108 ---RGGSEGCNIPQNI---ERLNGQGVC-QIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3160
Query: 167 IKQISV--PVRVQGLEQVKLI--AVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ 222
+ V P V+GL K++ AVGA H LA+ + G ++AWG+N++GQ G G T +
Sbjct: 3161 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 3220
Query: 223 PIPVQGLSGLTLVDIAAGGWHSTALT 248
P VQGL G + +A G HS A T
Sbjct: 3221 PTLVQGLEGQKITRVACGSSHSVAWT 3246
Score = 247 (92.0 bits), Expect = 3.3e-16, Sum P(2) = 3.3e-16
Identities = 69/254 (27%), Positives = 118/254 (46%)
Query: 57 GKTKTENIPSQVNALSNTK----IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPER 112
G T P ++A S + +V A G + A+ +G Y WG YG+ G
Sbjct: 441 GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSS- 499
Query: 113 KDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIK 168
+D+ +L + K+I +G ++ +T G VW+WG G
Sbjct: 500 EDEAIPMLVAGLK-----GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 554
Query: 169 QISVPVRVQGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPV 226
P ++ L+ + ++ V G+ ++AL +DG +++WG + +LG G + P +
Sbjct: 555 GCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLL 614
Query: 227 QGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGE 286
+GL G ++D+AAG H ALT+D EV+ WG + + F D + +K P + L +
Sbjct: 615 EGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HF-DTLRVTKPEPSALPGLDTK 672
Query: 287 DIVQVSCGGTHSVA 300
IV ++CG S A
Sbjct: 673 HIVGIACGPAQSFA 686
Score = 201 (75.8 bits), Expect = 9.6e-10, Sum P(3) = 9.6e-10
Identities = 65/213 (30%), Positives = 100/213 (46%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIGGWHC--LAVDDQGRAYAWGGNEYGQCGEEPERKD 114
G ++ E IP V L K++ A G LAV + G+ ++WG +YG+ G
Sbjct: 497 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 556
Query: 115 DTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG----QPWPPGDIKQI 170
T +++ + L V +V G SV LT++G V++WG Q G + +
Sbjct: 557 KTPKLIEK--------LQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHV 608
Query: 171 SVPVRVQGLEQVKLI--AVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIP--V 226
P ++GL+ K+I A G+ H LAL ED + +WG+N+ Q DT ++P P +
Sbjct: 609 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKPEPSAL 666
Query: 227 QGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRG 259
GL +V IA G S A + E W G
Sbjct: 667 PGLDTKHIVGIACGPAQSFAWSSCSE---WSIG 696
Score = 196 (74.1 bits), Expect = 7.3e-19, Sum P(2) = 7.3e-19
Identities = 54/169 (31%), Positives = 83/169 (49%)
Query: 199 GALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGR 258
G ++ WG+N GQLG + P P + L+ L V + G A+T DG++Y G
Sbjct: 3875 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 3934
Query: 259 GEHGRLGFGDNDKSSKMVPQKVNLLAGEDI--VQVSCGGTHSVALTRDGHIFSFGRGDHG 316
G GRLG G + S P + + I V V+ GG H +AL+ +G ++S+G + G
Sbjct: 3935 GAGGRLGVGGTESVS--TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3992
Query: 317 RLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
+LG+G + P + P I + R + VD VA GG H+ +
Sbjct: 3993 KLGHGNR----SPCDRPRVIESLRGT-EVVD-------VAAGGAHSACV 4029
Score = 194 (73.4 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 45/131 (34%), Positives = 71/131 (54%)
Query: 201 LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGE 260
++ WG N+ QLG P + LS L +V +A G A+T +G+VY G
Sbjct: 2882 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 2941
Query: 261 HGRLGFGDNDKSSKMVPQKVNLLAGEDI--VQVSCGGTHSVALTRDGHIFSFGRGDHGRL 318
+GRLG G + + +P+++ L+ + V V GG H+ ALT DG +FS+G GD G+L
Sbjct: 2942 NGRLGLGISS-GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3000
Query: 319 GYGRKVTTGQP 329
G+ ++ +P
Sbjct: 3001 GHFSRMNCDKP 3011
Score = 123 (48.4 bits), Expect = 8.9e-38, Sum P(2) = 8.9e-38
Identities = 32/114 (28%), Positives = 55/114 (48%)
Query: 9 AWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKT----KTEN- 63
+WG G+ G+LG G ++ + +++ L+ V V GS+ S+A+ DG+ K +N
Sbjct: 539 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQ 598
Query: 64 -----------IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQC 106
P + L K++ A G HCLA+ + ++WG N+ QC
Sbjct: 599 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QC 650
Score = 91 (37.1 bits), Expect = 2.0e-34, Sum P(2) = 2.0e-34
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNS--LAICDDG 57
+ S+ + WG GE G+LG G+N + +VK L ++V V GSR++ LA+ D+G
Sbjct: 3035 LTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3093
Score = 90 (36.7 bits), Expect = 3.3e-36, Sum P(2) = 3.3e-36
Identities = 27/99 (27%), Positives = 50/99 (50%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKT--ENI 64
+ +WG G++ +LG G E + +++ L+ KV V AGS + LA+ +D + + N
Sbjct: 589 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 648
Query: 65 PSQ-VNALSNTKIVQAAIGGW---HCLAVD-DQGRAYAW 98
Q + L TK +A+ G H + + +++AW
Sbjct: 649 QCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSFAW 687
Score = 58 (25.5 bits), Expect = 5.8e-31, Sum P(2) = 5.8e-31
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVC-VVKALEPYKVRSVV--AGSRNSLAICDDGK 58
+ A G +G+LG+G + + + AL Y V+ V +G R++ A+ DGK
Sbjct: 2934 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 2988
Score = 38 (18.4 bits), Expect = 5.9e-37, Sum P(2) = 5.9e-37
Identities = 7/10 (70%), Positives = 7/10 (70%)
Query: 9 AWGSGEDGQL 18
AW SGED L
Sbjct: 122 AWRSGEDADL 131
Score = 37 (18.1 bits), Expect = 8.1e-26, Sum P(3) = 8.1e-26
Identities = 6/8 (75%), Positives = 6/8 (75%)
Query: 250 DGEVYGWG 257
DG V GWG
Sbjct: 3617 DGSVNGWG 3624
>MGI|MGI:1914595 [details] [associations]
symbol:Herc4 "hect domain and RLD 4" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;TAS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=TAS] [GO:0016874
"ligase activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 MGI:MGI:1914595 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0030154
GO:GO:0007283 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOVERGEN:HBG050878 HSSP:Q9UEP9
CTD:26091 KO:K10615 EMBL:AK009436 EMBL:AK143111 EMBL:AK145735
EMBL:AK147723 EMBL:BC026855 EMBL:BC043082 EMBL:BC047157
EMBL:BC060033 IPI:IPI00453903 IPI:IPI00554980 IPI:IPI00828240
RefSeq:NP_080377.2 RefSeq:NP_084390.1 UniGene:Mm.234437
UniGene:Mm.422789 UniGene:Mm.441725 UniGene:Mm.487274
ProteinModelPortal:Q6PAV2 SMR:Q6PAV2 STRING:Q6PAV2
PhosphoSite:Q6PAV2 PaxDb:Q6PAV2 PRIDE:Q6PAV2
Ensembl:ENSMUST00000020258 GeneID:67345 KEGG:mmu:67345
UCSC:uc007fka.2 UCSC:uc007fkc.2 UCSC:uc007fkd.2 InParanoid:Q6PAV2
OMA:KLVIQPT OrthoDB:EOG44XJG1 NextBio:324318 Bgee:Q6PAV2
CleanEx:MM_HERC4 Genevestigator:Q6PAV2 Uniprot:Q6PAV2
Length = 1057
Score = 416 (151.5 bits), Expect = 9.0e-38, P = 9.0e-38
Identities = 105/310 (33%), Positives = 162/310 (52%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P + + N K+ G H + V D G Y G N+ GQ G E RK +++ D
Sbjct: 25 PRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPE-QVVALD- 82
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG-----QPWPPGDIKQISVPVRVQGL 179
A ++ VA G H++ L +G V+ WG Q G + I VP ++ L
Sbjct: 83 ------AQNIVA--VACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL 134
Query: 180 EQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTG-DTQPRSQPIPVQGLSGLTLVD 236
++++ V G +H+LAL + ++ WG N+YGQLG G D Q ++ P ++ L G+ +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQ 194
Query: 237 IAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGT 296
+AAGG HS LT G ++GWGR + G+LG ND++ + VP + L + IV + CG
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL--NDENDRYVPNLLKSLRSQKIVYICCGED 252
Query: 297 HSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVA 356
H+ ALT++G +F+FG G +G+LG+ T+ + IN PR + + I VA
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNS--TSHE-----IN---PRKVFELMGS--IVTQVA 300
Query: 357 CGGRHTLAIV 366
CG +HT A V
Sbjct: 301 CGRQHTSAFV 310
Score = 392 (143.0 bits), Expect = 3.4e-35, P = 3.4e-35
Identities = 114/353 (32%), Positives = 174/353 (49%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKA--LEPYKVRSVVAGSRNSLAICDDGKT----- 59
++ WG+ GQLG+G +E + ++ KVR V G R+++ + DDG
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 60 ---------KTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEP 110
K+ P QV AL IV A G H LA++D+G+ YAWG + GQ G +
Sbjct: 61 NDLGQLGHEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQG 120
Query: 111 ERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP--WPPG--- 165
++ R+ R+I + + + QVA G HS+ L++ V+ WGQ G
Sbjct: 121 S--EECIRV-PRNI----KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGI 173
Query: 166 DIKQISVPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQP 223
D ++ + P ++ L + +A G H+ L GA++ WG N++GQLG D R P
Sbjct: 174 DCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233
Query: 224 IPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLL 283
++ L +V I G H+ ALT +G V+ +G G +G+LG N S ++ P+KV L
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH--NSTSHEINPRKVFEL 291
Query: 284 AGEDIVQVSCGGTHSVALT-RDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPIN 335
G + QV+CG H+ A G I+SFG G +G+LG G P V N
Sbjct: 292 MGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 122 (48.0 bits), Expect = 0.00048, P = 0.00048
Identities = 33/110 (30%), Positives = 58/110 (52%)
Query: 256 WGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDH 315
WG +G+LG G D+ + P++ + + + V CG H+V + DG +++ G D
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 316 GRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
G+LG+ + + +P +V + + A +N +A VACG HTLA+
Sbjct: 64 GQLGHEK--SRKKPEQV-VALDA-QNI--------VA--VACGEAHTLAL 99
>UNIPROTKB|E1B782 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032183 "SUMO binding" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208
OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706 EMBL:DAAA02003804
EMBL:DAAA02003805 IPI:IPI00713038 Ensembl:ENSBTAT00000018496
Uniprot:E1B782
Length = 4847
Score = 415 (151.1 bits), Expect = 6.1e-37, Sum P(2) = 6.1e-37
Identities = 116/393 (29%), Positives = 188/393 (47%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK------- 58
+I WG GQLG + + +AL + ++ G + A+ DGK
Sbjct: 3966 TIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGYG 4025
Query: 59 ---------TKTENIPSQVNALSNTKIVQAAI--GGWHCLAVDDQGRAYAWGGNEYGQCG 107
T++ + P+ + ++ + I + A+ GG HCLA+ +G Y+WG E G+ G
Sbjct: 4026 AGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4085
Query: 108 EEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----WP 163
D R VI +++ VAAGG HS +T G ++TWG+
Sbjct: 4086 HGNRSPCDRPR------VIESLRGTEVV--DVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4137
Query: 164 PGDIKQISVPVRVQGLEQVKLIAV----GAFHNLALQEDGALWAWGNNEYGQLGTGDTQP 219
D + P V+ L+ +++ V G L L +D +W+WG+ +YG+LG G +
Sbjct: 4138 HSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4197
Query: 220 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 279
P+ + L+GL +V + G S ALT G VY WG+G++ RLG G +D + P++
Sbjct: 4198 CKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR--PRQ 4255
Query: 280 VNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
V L G+ ++ ++ G H V + DG ++++G D G+LG G T ++ P + A
Sbjct: 4256 VQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDG----TTNAIQRPRLVAAL 4311
Query: 340 RNAGDGVDRRWIAKLVACGGRHTLAIVEWQTEE 372
+ G V+R VACG HTLA W T +
Sbjct: 4312 Q--GKKVNR------VACGSAHTLA---WSTSK 4333
Score = 373 (136.4 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 93/281 (33%), Positives = 152/281 (54%)
Query: 64 IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRD 123
+PS LS +VQ A G AV +G+ YA CGE + G I
Sbjct: 2993 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA--------CGEATNGRLGLG-ISSGT 3043
Query: 124 IVIPQRCAP--KLIVRQVA--AGGTHSVVLTREGHVWTWGQ--PWPPGDIKQISV--PVR 175
+ IP++ +V++VA +GG H+ LT +G V++WG+ G +++ P
Sbjct: 3044 VPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRL 3103
Query: 176 VQGLE--QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLT 233
++ L+ +++ IA G+ H+ AL G L+ WG EYG+LG GD + +P V+ L G
Sbjct: 3104 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR 3163
Query: 234 LVDIAAGGW--HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQV 291
++ +A G + ALTD+G V+ WG G+ G+LG G ++ + +PQ + L G+ + Q+
Sbjct: 3164 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN--IPQNIERLNGQGVCQI 3221
Query: 292 SCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
CG S+ALT+ G ++++G+GD+ RLG+G V +P V
Sbjct: 3222 ECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVV 3262
Score = 366 (133.9 bits), Expect = 8.7e-32, Sum P(2) = 8.7e-32
Identities = 93/310 (30%), Positives = 155/310 (50%)
Query: 40 VRSVVAGSRNSLAICDDGKTKTE--N----IPSQVNALSNTKIVQAAI--GGWHCLAVDD 91
V + + L + +G+ T+ N P V L++ IV+ A G H LA+
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA 513
Query: 92 QGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTR 151
G Y+WG + G+ G + +++ + A K +V +A G T+S +T
Sbjct: 514 TGEVYSWGCGDGGRLGHGDTVPLEEPKVIS---AFSGKQAGKHVVH-IACGSTYSAAITA 569
Query: 152 EGHVWTWGQP----WPPGDIKQISVPVRVQGLEQVKLIAV----GAFHNLALQEDGALWA 203
EG ++TWG+ G + ++P+ V GL+ +K+I V G LA+ E+G +W+
Sbjct: 570 EGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWS 629
Query: 204 WGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGR 263
WG+ +YG+LG G + P ++ L L +V + G S ALT DG+VY WG+G++ R
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQR 689
Query: 264 LGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRK 323
LG G + P+ + L G+ ++ V+ G TH +ALT D + S+G D + +
Sbjct: 690 LGHGTEEHVR--YPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLR 747
Query: 324 VTTGQPMEVP 333
VT +P +P
Sbjct: 748 VTKPEPSALP 757
Score = 356 (130.4 bits), Expect = 3.5e-36, Sum P(2) = 3.5e-36
Identities = 99/320 (30%), Positives = 161/320 (50%)
Query: 61 TENIPSQVNALSNTKIVQAAI--GGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGR 118
T IP Q+ ALS+ + + A+ GG H A+ G+ ++WG + G+ G D R
Sbjct: 3043 TVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPR 3102
Query: 119 ILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----WPPGDIKQISVPV 174
++ + + +R +R +A G +HS LT G ++TWG GD P
Sbjct: 3103 LI--EALKTKR------IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3154
Query: 175 RVQGL--EQVKLIAVGA--FHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLS 230
V+ L +V +A G+ LAL ++G +++WG+ ++G+LG G ++ + P ++ L+
Sbjct: 3155 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3214
Query: 231 GLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQ 290
G + I G S ALT G V+ WG+G++ RLG G + K PQ V L G+ IV
Sbjct: 3215 GQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK--PQVVEGLRGKKIVH 3272
Query: 291 VSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRW 350
V+ G H +A+T G ++++G DHG+ G G +P V G++ +
Sbjct: 3273 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLV-----------QGLEGQK 3321
Query: 351 IAKLVACGGRHTLAIVEWQT 370
I + VACG H++A W T
Sbjct: 3322 ITR-VACGSSHSVA---WTT 3337
Score = 338 (124.0 bits), Expect = 9.3e-38, Sum P(2) = 9.3e-38
Identities = 85/261 (32%), Positives = 132/261 (50%)
Query: 84 WHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAA-G 142
W L+ G Y WG N GQ G K + +P C +R V G
Sbjct: 3957 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAK----------VKVPTPCEALAALRPVQLIG 4005
Query: 143 GTHSV-VLTREGHVWTWGQP----WPPGDIKQISVPVRVQGLEQV--KLIAV--GAFHNL 193
G ++ +T +G ++ G G + +S P ++ ++ V K +AV G H L
Sbjct: 4006 GEQTLFAVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCL 4065
Query: 194 ALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEV 253
AL +G +++WG E G+LG G+ P +P ++ L G +VD+AAGG HS +T G++
Sbjct: 4066 ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDL 4125
Query: 254 YGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGG--THSVALTRDGHIFSFG 311
Y WG+G +GRLG D++ K P+ V L G +V V+CG ++ LT D ++S+G
Sbjct: 4126 YTWGKGRYGRLGHSDSEDQLK--PKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWG 4183
Query: 312 RGDHGRLGYGRKVTTGQPMEV 332
GD+G+LG G PM++
Sbjct: 4184 DGDYGKLGRGGSDGCKVPMKI 4204
Score = 330 (121.2 bits), Expect = 5.2e-28, Sum P(2) = 5.2e-28
Identities = 99/316 (31%), Positives = 154/316 (48%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P Q L+N + Q A L + GR Y N DT L +
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS------------DT---LAPQL 487
Query: 125 VIPQRCAPKLIVRQVA-AGGTHSVVLTREGHVWTWG----------QPWPPGDIKQISVP 173
V Q A + IV+ A + G H + L G V++WG P + K IS
Sbjct: 488 V--QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAF 545
Query: 174 VRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLT 233
Q + V IA G+ ++ A+ +G L+ WG YG+LG G ++ + P+ V GL GL
Sbjct: 546 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 605
Query: 234 LVDIAAGGW--HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQV 291
++D+A G + A+T++G+V+ WG G++G+LG G +D P+ + L D+V+V
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK--TPKLIEKLQDLDVVKV 663
Query: 292 SCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWI 351
CG SVALT+DG ++S+G+GD+ RLG+G T + + P + +G+ + +
Sbjct: 664 RCGSQFSVALTKDGQVYSWGKGDNQRLGHG----TEEHVRYPKLL-------EGLQGKKV 712
Query: 352 AKLVACGGRHTLAIVE 367
VA G H LA+ E
Sbjct: 713 ID-VAAGSTHCLALTE 727
Score = 323 (118.8 bits), Expect = 3.5e-36, Sum P(2) = 3.5e-36
Identities = 93/268 (34%), Positives = 137/268 (51%)
Query: 113 KDDTGRILRRDIVIPQ--RCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPP--G-DI 167
KD G + I +P L V QVA G +T EG V+ G+ G I
Sbjct: 2980 KDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGI 3039
Query: 168 KQISVPV--RVQGLEQ--VKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS 221
+VP+ ++ L VK +AV G H AL DG +++WG + G+LG
Sbjct: 3040 SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCD 3099
Query: 222 QPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVN 281
+P ++ L + DIA G HS ALT GE+Y WG GE+GRLG GDN ++++ P+ V
Sbjct: 3100 KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN--TTQLKPKMVK 3157
Query: 282 LLAGEDIVQVSCGG--THSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
+L G ++QV+CG ++ALT +G +FS+G GD G+LG G + +P NI
Sbjct: 3158 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS----EGCNIPQNIE-- 3211
Query: 340 RNAGDGVDRRWIAKLVACGGRHTLAIVE 367
R G GV + + CG + +LA+ +
Sbjct: 3212 RLNGQGVCQ------IECGAQFSLALTK 3233
Score = 301 (111.0 bits), Expect = 8.6e-26, Sum P(3) = 8.6e-26
Identities = 82/266 (30%), Positives = 134/266 (50%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKT----- 61
+ +WG G+DG+LG + + +++AL+ ++R + GS +S A+ G+ T
Sbjct: 3079 VFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3138
Query: 62 -------ENI----PSQVNALSNTKIVQAAIGGWHC--LAVDDQGRAYAWGGNEYGQCGE 108
+N P V L +++Q A G LA+ D+G ++WG ++G+ G
Sbjct: 3139 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG- 3197
Query: 109 EPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP--WPPGD 166
R G + ++I +R + + Q+ G S+ LT+ G VWTWG+ + G
Sbjct: 3198 ---RGGSEGCNIPQNI---ERLNGQGVC-QIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3250
Query: 167 IKQISV--PVRVQGLEQVKLI--AVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ 222
+ V P V+GL K++ AVGA H LA+ + G ++AWG+N++GQ G G T +
Sbjct: 3251 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 3310
Query: 223 PIPVQGLSGLTLVDIAAGGWHSTALT 248
P VQGL G + +A G HS A T
Sbjct: 3311 PTLVQGLEGQKITRVACGSSHSVAWT 3336
Score = 247 (92.0 bits), Expect = 3.4e-16, Sum P(2) = 3.4e-16
Identities = 69/254 (27%), Positives = 118/254 (46%)
Query: 57 GKTKTENIPSQVNALSNTK----IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPER 112
G T P ++A S + +V A G + A+ +G Y WG YG+ G
Sbjct: 531 GDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSS- 589
Query: 113 KDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIK 168
+D+ +L + K+I +G ++ +T G VW+WG G
Sbjct: 590 EDEAIPMLVAGLK-----GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 644
Query: 169 QISVPVRVQGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPV 226
P ++ L+ + ++ V G+ ++AL +DG +++WG + +LG G + P +
Sbjct: 645 GCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLL 704
Query: 227 QGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGE 286
+GL G ++D+AAG H ALT+D EV+ WG + + F D + +K P + L +
Sbjct: 705 EGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HF-DTLRVTKPEPSALPGLDTK 762
Query: 287 DIVQVSCGGTHSVA 300
IV ++CG S A
Sbjct: 763 HIVGIACGPAQSFA 776
Score = 201 (75.8 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 65/213 (30%), Positives = 100/213 (46%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIGGWHC--LAVDDQGRAYAWGGNEYGQCGEEPERKD 114
G ++ E IP V L K++ A G LAV + G+ ++WG +YG+ G
Sbjct: 587 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 646
Query: 115 DTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG----QPWPPGDIKQI 170
T +++ + L V +V G SV LT++G V++WG Q G + +
Sbjct: 647 KTPKLIEK--------LQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHV 698
Query: 171 SVPVRVQGLEQVKLI--AVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIP--V 226
P ++GL+ K+I A G+ H LAL ED + +WG+N+ Q DT ++P P +
Sbjct: 699 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKPEPSAL 756
Query: 227 QGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRG 259
GL +V IA G S A + E W G
Sbjct: 757 PGLDTKHIVGIACGPAQSFAWSSCSE---WSIG 786
Score = 196 (74.1 bits), Expect = 7.6e-19, Sum P(2) = 7.6e-19
Identities = 54/169 (31%), Positives = 83/169 (49%)
Query: 199 GALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGR 258
G ++ WG+N GQLG + P P + L+ L V + G A+T DG++Y G
Sbjct: 3965 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 4024
Query: 259 GEHGRLGFGDNDKSSKMVPQKVNLLAGEDI--VQVSCGGTHSVALTRDGHIFSFGRGDHG 316
G GRLG G + S P + + I V V+ GG H +AL+ +G ++S+G + G
Sbjct: 4025 GAGGRLGVGGTESVS--TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4082
Query: 317 RLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
+LG+G + P + P I + R + VD VA GG H+ +
Sbjct: 4083 KLGHGNR----SPCDRPRVIESLRGT-EVVD-------VAAGGAHSACV 4119
Score = 194 (73.4 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 45/131 (34%), Positives = 71/131 (54%)
Query: 201 LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGE 260
++ WG N+ QLG P + LS L +V +A G A+T +G+VY G
Sbjct: 2972 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3031
Query: 261 HGRLGFGDNDKSSKMVPQKVNLLAGEDI--VQVSCGGTHSVALTRDGHIFSFGRGDHGRL 318
+GRLG G + + +P+++ L+ + V V GG H+ ALT DG +FS+G GD G+L
Sbjct: 3032 NGRLGLGISS-GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3090
Query: 319 GYGRKVTTGQP 329
G+ ++ +P
Sbjct: 3091 GHFSRMNCDKP 3101
Score = 123 (48.4 bits), Expect = 9.3e-38, Sum P(2) = 9.3e-38
Identities = 32/114 (28%), Positives = 55/114 (48%)
Query: 9 AWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKT----KTEN- 63
+WG G+ G+LG G ++ + +++ L+ V V GS+ S+A+ DG+ K +N
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQ 688
Query: 64 -----------IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQC 106
P + L K++ A G HCLA+ + ++WG N+ QC
Sbjct: 689 RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QC 740
Score = 91 (37.1 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNS--LAICDDG 57
+ S+ + WG GE G+LG G+N + +VK L ++V V GSR++ LA+ D+G
Sbjct: 3125 LTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3183
Score = 90 (36.7 bits), Expect = 3.5e-36, Sum P(2) = 3.5e-36
Identities = 27/99 (27%), Positives = 50/99 (50%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKT--ENI 64
+ +WG G++ +LG G E + +++ L+ KV V AGS + LA+ +D + + N
Sbjct: 679 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Query: 65 PSQ-VNALSNTKIVQAAIGGW---HCLAVD-DQGRAYAW 98
Q + L TK +A+ G H + + +++AW
Sbjct: 739 QCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSFAW 777
Score = 58 (25.5 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVC-VVKALEPYKVRSVV--AGSRNSLAICDDGK 58
+ A G +G+LG+G + + + AL Y V+ V +G R++ A+ DGK
Sbjct: 3024 VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3078
Score = 51 (23.0 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 82 GGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDD 115
G W+ + D + + G E Q GE P RKDD
Sbjct: 34 GLWNEMVKDGE---IVYTGTELSQNGELPPRKDD 64
Score = 38 (18.4 bits), Expect = 6.1e-37, Sum P(2) = 6.1e-37
Identities = 7/10 (70%), Positives = 7/10 (70%)
Query: 9 AWGSGEDGQL 18
AW SGED L
Sbjct: 212 AWRSGEDADL 221
Score = 37 (18.1 bits), Expect = 8.6e-26, Sum P(3) = 8.6e-26
Identities = 6/8 (75%), Positives = 6/8 (75%)
Query: 250 DGEVYGWG 257
DG V GWG
Sbjct: 3707 DGSVNGWG 3714
>TAIR|locus:2159295 [details] [associations]
symbol:RUG3 "RCC1/UVR8/GEF-like 3" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] [GO:0032981 "mitochondrial respiratory chain complex
I assembly" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 EMBL:CP002688 GO:GO:0008380 EMBL:AB015472
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0032981
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.29139
UniGene:At.50545 HSSP:P18754 IPI:IPI00532631 RefSeq:NP_200895.2
ProteinModelPortal:Q9FJG9 SMR:Q9FJG9 PRIDE:Q9FJG9
EnsemblPlants:AT5G60870.1 GeneID:836208 KEGG:ath:AT5G60870
TAIR:At5g60870 HOGENOM:HOG000030010 InParanoid:Q9FJG9 OMA:ISCGLFH
PhylomeDB:Q9FJG9 ProtClustDB:CLSN2681113 Genevestigator:Q9FJG9
Uniprot:Q9FJG9
Length = 445
Score = 365 (133.5 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 91/292 (31%), Positives = 149/292 (51%)
Query: 57 GKTKTENIPSQVNALSNTKIVQA-AIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDD 115
G+ + +P+ +N L ++ A+GG H +A+ QG + WG +G G
Sbjct: 135 GQENSVFVPN-LNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFGALGH------- 186
Query: 116 TGRILRRDIVIPQRCAPK--LIVRQVAAGGTHSVVLTREGHVWTWGQP--------WP-- 163
++ R++V P+R + +A GTH+ +T G ++ WG+ P
Sbjct: 187 --KVYTRELV-PRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGPGR 243
Query: 164 -PGDIKQISVPVRVQGLE-QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS 221
P + +SVP +V+ L V ++ G F +AL ++G LW WG N +LG GD
Sbjct: 244 GPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGW 303
Query: 222 QPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVN 281
+P+PV L G+ + IA GG+HS ALT++G+V WG G HG+LG + ++ VP ++
Sbjct: 304 EPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLG--SSSLRNQKVPTEIE 361
Query: 282 LLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGY-GRKVTTGQPMEV 332
LA + IV ++ GG+ S A+T G ++ +G +LG G P+EV
Sbjct: 362 ALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPVEV 413
Score = 271 (100.5 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 79/240 (32%), Positives = 118/240 (49%)
Query: 139 VAAGGTHSVVLTREGHVWTWGQPWPP----GDIKQISVPVRVQGLEQ--VKLIAVGAFHN 192
++ G HS LT +G +W WG+ G + VP E+ ++ IA+G H+
Sbjct: 106 ISCGLFHSG-LTIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHS 164
Query: 193 LALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGE 252
+AL G ++ WG +G LG P V + IA G H+ A+T+ GE
Sbjct: 165 VALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGE 224
Query: 253 VYGWGRGE-HGRLGFGD----NDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHI 307
+Y WGR E GRLG G N+ VP KV L + VSCGG ++ALT++G +
Sbjct: 225 LYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTMALTKEGQL 283
Query: 308 FSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
+++G + LG G + +PM VP + +GV I + +ACGG H+LA+ E
Sbjct: 284 WNWGANSNYELGRGDNLGGWEPMPVP--------SLEGVR---ITQ-IACGGYHSLALTE 331
Score = 190 (71.9 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 53/135 (39%), Positives = 73/135 (54%)
Query: 235 VDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCG 294
+ I+ G +HS LT DG+++ WG+G+ GRLGFG ++S VP L I ++ G
Sbjct: 104 IGISCGLFHS-GLTIDGDLWIWGKGDGGRLGFGQ--ENSVFVPNLNPLFEEHSIRCIALG 160
Query: 295 GTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKL 354
G HSVALT G +F++G G G LG+ KV T + + PR VD W K+
Sbjct: 161 GLHSVALTHQGDVFTWGYGGFGALGH--KVYTRELV--------PRR----VDDSWDCKI 206
Query: 355 --VACGGRHTLAIVE 367
+A G HT AI E
Sbjct: 207 SAIATSGTHTAAITE 221
Score = 134 (52.2 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 46/168 (27%), Positives = 71/168 (42%)
Query: 10 WGSGEDGQLGIGNNEEREWVCVVKAL-EPYKVRSVVAGSRNSLAICDDGKTKT------- 61
WG G+ G+LG G E +V + L E + +R + G +S+A+ G T
Sbjct: 124 WGKGDGGRLGFGQ-ENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFG 182
Query: 62 ---------ENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPER 112
E +P +V+ + KI A G H A+ + G Y WG E G G
Sbjct: 183 ALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREE-GD-GRLG-L 239
Query: 113 KDDTGRILRRDIVIPQRCAPKLI-VRQVAAGGTHSVVLTREGHVWTWG 159
G + +P + + V V+ GG ++ LT+EG +W WG
Sbjct: 240 GPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALTKEGQLWNWG 287
Score = 126 (49.4 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 37/156 (23%), Positives = 70/156 (44%)
Query: 10 WGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKT---------- 59
WG+ + +LG G+N V +LE ++ + G +SLA+ ++GK
Sbjct: 286 WGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQ 345
Query: 60 ------KTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERK 113
+ + +P+++ AL++ KIV A GG A+ D G + WG + Q G +
Sbjct: 346 LGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVPGLPE 405
Query: 114 DDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVL 149
T + + C P ++ ++ G +H++ L
Sbjct: 406 IQTTPVEVNFLTEEDECQPHKVI-SISIGASHALCL 440
Score = 62 (26.9 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 201 LWAWGNNEYGQLGTGDTQPRSQPIPVQGL 229
L++WG GQLG G + R P PV L
Sbjct: 50 LFSWGRGASGQLGGGIEEIRMYPSPVANL 78
Score = 55 (24.4 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 4 TTSIIAWGSGEDGQLGIGNNEER 26
T + +WG G GQLG G E R
Sbjct: 47 TLQLFSWGRGASGQLGGGIEEIR 69
>RGD|1307989 [details] [associations]
symbol:Herc2 "HECT and RLD domain containing E3 ubiquitin
protein ligase 2" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IBA] [GO:0005634
"nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0007283
"spermatogenesis" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0020037 "heme binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0032183 "SUMO binding"
evidence=ISO] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
GO:GO:0042787 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00476523 Ensembl:ENSRNOT00000019318
UCSC:RGD:1307989 ArrayExpress:F1M716 Uniprot:F1M716
Length = 3607
Score = 419 (152.6 bits), Expect = 2.7e-37, P = 2.7e-37
Identities = 116/393 (29%), Positives = 187/393 (47%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK------- 58
+I WG GQLG + + +AL + ++ G + A+ DGK
Sbjct: 2727 TIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYG 2786
Query: 59 ---------TKTENIPSQVNALSNTKIVQAAI--GGWHCLAVDDQGRAYAWGGNEYGQCG 107
T++ + P+ + ++ + I + A+ GG HCLA+ +G Y+WG E G+ G
Sbjct: 2787 AGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 2846
Query: 108 EEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----WP 163
D R++ + V VAAGG HS +T G ++TWG+
Sbjct: 2847 HGNRSPCDRPRVIES--------LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 2898
Query: 164 PGDIKQISVPVRVQGLEQVKLIAV----GAFHNLALQEDGALWAWGNNEYGQLGTGDTQP 219
D + P V+ L+ ++I + G L L +D +W+WG+ +YG+LG G +
Sbjct: 2899 HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 2958
Query: 220 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 279
P+ + L+GL +V + G S ALT G VY WG+G++ RLG G +D + P++
Sbjct: 2959 CKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR--PRQ 3016
Query: 280 VNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
V L G+ ++ ++ G H V T DG ++++G D G+LG G T ++ P + A
Sbjct: 3017 VQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG----TTNAIQRPRLVAAL 3072
Query: 340 RNAGDGVDRRWIAKLVACGGRHTLAIVEWQTEE 372
+ G V+R VACG HTLA W T +
Sbjct: 3073 Q--GKKVNR------VACGSAHTLA---WSTSK 3094
Score = 367 (134.2 bits), Expect = 8.9e-32, P = 8.9e-32
Identities = 91/281 (32%), Positives = 152/281 (54%)
Query: 64 IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRD 123
+PS LS +VQ A G AV +G+ Y+ CGE + G +
Sbjct: 1791 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS--------CGEATNGRLGLG-MSSGT 1841
Query: 124 IVIPQRCAP--KLIVRQVA--AGGTHSVVLTREGHVWTWGQ--PWPPGDIKQISV--PVR 175
+ IP++ +V++VA +GG H+ LT +G V++WG+ G +++ P
Sbjct: 1842 VPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRL 1901
Query: 176 VQGLE--QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLT 233
++ L+ +++ IA G+ H+ AL G L+ WG EYG+LG GD + +P V+ L G
Sbjct: 1902 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR 1961
Query: 234 LVDIAAGGW--HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQV 291
++ +A G + ALTD+G V+ WG G+ G+LG G ++ + +PQ + L G+ + Q+
Sbjct: 1962 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN--IPQNIERLNGQGVCQI 2019
Query: 292 SCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
CG S+ALT+ G ++++G+GD+ RLG+G V +P V
Sbjct: 2020 ECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVV 2060
Score = 358 (131.1 bits), Expect = 8.0e-31, P = 8.0e-31
Identities = 99/320 (30%), Positives = 161/320 (50%)
Query: 61 TENIPSQVNALSNTKIVQAAI--GGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGR 118
T IP Q+ ALS+ + + A+ GG H A+ G+ ++WG + G+ G D R
Sbjct: 1841 TVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPR 1900
Query: 119 ILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----WPPGDIKQISVPV 174
++ + + +R +R +A G +HS LT G ++TWG GD P
Sbjct: 1901 LI--EALKTKR------IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 1952
Query: 175 RVQGL--EQVKLIAVGA--FHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLS 230
V+ L +V +A G+ LAL ++G +++WG+ ++G+LG G ++ + P ++ L+
Sbjct: 1953 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 2012
Query: 231 GLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQ 290
G + I G S ALT G V+ WG+G++ RLG G + K PQ V L G+ IV
Sbjct: 2013 GQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK--PQVVEGLRGKKIVH 2070
Query: 291 VSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRW 350
V+ G H +A+T G ++++G DHG+ G G +P V G++ +
Sbjct: 2071 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLV-----------QGLEGQK 2119
Query: 351 IAKLVACGGRHTLAIVEWQT 370
I + VACG H++A W T
Sbjct: 2120 ITR-VACGSSHSVA---WTT 2135
Score = 338 (124.0 bits), Expect = 1.1e-34, Sum P(2) = 1.1e-34
Identities = 83/261 (31%), Positives = 133/261 (50%)
Query: 84 WHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAA-G 142
W L+ G Y WG N GQ G K + +P C +R V G
Sbjct: 2718 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAK----------VKVPTPCEALATLRPVQLIG 2766
Query: 143 GTHSV-VLTREGHVWTWGQPWPP----GDIKQISVPVRVQGLEQV--KLIAV--GAFHNL 193
G ++ +T +G ++ G G + +S P ++ ++ V K +AV G H L
Sbjct: 2767 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCL 2826
Query: 194 ALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEV 253
AL +G +++WG E G+LG G+ P +P ++ L G+ +VD+AAGG HS +T G++
Sbjct: 2827 ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 2886
Query: 254 YGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGG--THSVALTRDGHIFSFG 311
Y WG+G +GRLG D++ K P+ V L G ++ ++CG ++ LT D ++S+G
Sbjct: 2887 YTWGKGRYGRLGHSDSEDQLK--PKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWG 2944
Query: 312 RGDHGRLGYGRKVTTGQPMEV 332
GD+G+LG G PM++
Sbjct: 2945 DGDYGKLGRGGSDGCKVPMKI 2965
Score = 338 (124.0 bits), Expect = 1.1e-28, P = 1.1e-28
Identities = 100/323 (30%), Positives = 154/323 (47%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVC-VVKALEPYKVRSVV--AGSRNSLAICDDGKT---- 59
+ + G +G+LG+G + + + AL Y V+ V +G R++ A+ DGK
Sbjct: 1822 VYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 1881
Query: 60 -----KTENI-------PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 107
K + P + AL +I A G H A+ G Y WG EYG+ G
Sbjct: 1882 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 1941
Query: 108 EEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGG--THSVVLTREGHVWTWGQ----P 161
D+T ++ + + + ++I QVA G ++ LT EG V++WG
Sbjct: 1942 HG----DNTTQLKPKMVKV--LLGHRVI--QVACGSRDAQTLALTDEGLVFSWGDGDFGK 1993
Query: 162 WPPGDIKQISVPVRVQGL--EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQP 219
G + ++P ++ L + V I GA +LAL + G +W WG +Y +LG G
Sbjct: 1994 LGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 2053
Query: 220 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 279
+P V+GL G +V +A G H A+TD G+VY WG +HG+ G G + K P
Sbjct: 2054 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK--PTL 2111
Query: 280 VNLLAGEDIVQVSCGGTHSVALT 302
V L G+ I +V+CG +HSVA T
Sbjct: 2112 VQGLEGQKITRVACGSSHSVAWT 2134
Score = 322 (118.4 bits), Expect = 5.3e-27, P = 5.3e-27
Identities = 91/269 (33%), Positives = 137/269 (50%)
Query: 113 KDDTGRILRRDIVIPQ--RCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIK-- 168
KD G + I +P L V QVA G +T EG V++ G+ G +
Sbjct: 1778 KDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEA-TNGRLGLG 1836
Query: 169 ----QISVPVRVQGLEQ--VKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPR 220
+ +P ++ L VK +AV G H AL DG +++WG + G+LG
Sbjct: 1837 MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC 1896
Query: 221 SQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV 280
+P ++ L + DIA G HS ALT GE+Y WG GE+GRLG GDN ++++ P+ V
Sbjct: 1897 DKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN--TTQLKPKMV 1954
Query: 281 NLLAGEDIVQVSCGG--THSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPA 338
+L G ++QV+CG ++ALT +G +FS+G GD G+LG G + +P NI
Sbjct: 1955 KVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS----EGCNIPQNIE- 2009
Query: 339 PRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
R G GV + + CG + +LA+ +
Sbjct: 2010 -RLNGQGVCQ------IECGAQFSLALTK 2031
Score = 194 (73.4 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 54/169 (31%), Positives = 83/169 (49%)
Query: 199 GALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGR 258
G ++ WG+N GQLG + P P + L+ L V + G A+T DG++Y G
Sbjct: 2726 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 2785
Query: 259 GEHGRLGFGDNDKSSKMVPQKVNLLAGEDI--VQVSCGGTHSVALTRDGHIFSFGRGDHG 316
G GRLG G + S P + + I V V+ GG H +AL+ +G ++S+G + G
Sbjct: 2786 GAGGRLGIGGTESVS--TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 2843
Query: 317 RLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
+LG+G + P + P I + R + VD VA GG H+ +
Sbjct: 2844 KLGHGNR----SPCDRPRVIESLRGI-EVVD-------VAAGGAHSACV 2880
Score = 194 (73.4 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 45/131 (34%), Positives = 71/131 (54%)
Query: 201 LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGE 260
++ WG N+ QLG P + LS L +V +A G A+T +G+VY G
Sbjct: 1770 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 1829
Query: 261 HGRLGFGDNDKSSKMVPQKVNLLAGEDI--VQVSCGGTHSVALTRDGHIFSFGRGDHGRL 318
+GRLG G + + +P+++ L+ + V V GG H+ ALT DG +FS+G GD G+L
Sbjct: 1830 NGRLGLGMSS-GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 1888
Query: 319 GYGRKVTTGQP 329
G+ ++ +P
Sbjct: 1889 GHFSRMNCDKP 1899
Score = 91 (37.1 bits), Expect = 1.1e-34, Sum P(2) = 1.1e-34
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNS--LAICDDG 57
+ S+ + WG GE G+LG G+N + +VK L ++V V GSR++ LA+ D+G
Sbjct: 1923 LTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 1981
Score = 75 (31.5 bits), Expect = 5.2e-33, Sum P(2) = 5.2e-33
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 1 MASTTS--IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLA 52
+A T S + AWG + GQ G G +V+ LE K+ V GS +S+A
Sbjct: 2079 LAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2132
>UNIPROTKB|F1M560 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872
GO:GO:0008270 GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.10.120.10
SUPFAM:SSF55856 InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00779702 Ensembl:ENSRNOT00000055965
ArrayExpress:F1M560 Uniprot:F1M560
Length = 3643
Score = 419 (152.6 bits), Expect = 2.7e-37, P = 2.7e-37
Identities = 116/393 (29%), Positives = 187/393 (47%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK------- 58
+I WG GQLG + + +AL + ++ G + A+ DGK
Sbjct: 2763 TIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYG 2822
Query: 59 ---------TKTENIPSQVNALSNTKIVQAAI--GGWHCLAVDDQGRAYAWGGNEYGQCG 107
T++ + P+ + ++ + I + A+ GG HCLA+ +G Y+WG E G+ G
Sbjct: 2823 AGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 2882
Query: 108 EEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----WP 163
D R++ + V VAAGG HS +T G ++TWG+
Sbjct: 2883 HGNRSPCDRPRVIES--------LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 2934
Query: 164 PGDIKQISVPVRVQGLEQVKLIAV----GAFHNLALQEDGALWAWGNNEYGQLGTGDTQP 219
D + P V+ L+ ++I + G L L +D +W+WG+ +YG+LG G +
Sbjct: 2935 HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 2994
Query: 220 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 279
P+ + L+GL +V + G S ALT G VY WG+G++ RLG G +D + P++
Sbjct: 2995 CKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR--PRQ 3052
Query: 280 VNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
V L G+ ++ ++ G H V T DG ++++G D G+LG G T ++ P + A
Sbjct: 3053 VQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG----TTNAIQRPRLVAAL 3108
Query: 340 RNAGDGVDRRWIAKLVACGGRHTLAIVEWQTEE 372
+ G V+R VACG HTLA W T +
Sbjct: 3109 Q--GKKVNR------VACGSAHTLA---WSTSK 3130
Score = 367 (134.2 bits), Expect = 9.0e-32, P = 9.0e-32
Identities = 91/281 (32%), Positives = 152/281 (54%)
Query: 64 IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRD 123
+PS LS +VQ A G AV +G+ Y+ CGE + G +
Sbjct: 1791 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS--------CGEATNGRLGLG-MSSGT 1841
Query: 124 IVIPQRCAP--KLIVRQVA--AGGTHSVVLTREGHVWTWGQ--PWPPGDIKQISV--PVR 175
+ IP++ +V++VA +GG H+ LT +G V++WG+ G +++ P
Sbjct: 1842 VPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRL 1901
Query: 176 VQGLE--QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLT 233
++ L+ +++ IA G+ H+ AL G L+ WG EYG+LG GD + +P V+ L G
Sbjct: 1902 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR 1961
Query: 234 LVDIAAGGW--HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQV 291
++ +A G + ALTD+G V+ WG G+ G+LG G ++ + +PQ + L G+ + Q+
Sbjct: 1962 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN--IPQNIERLNGQGVCQI 2019
Query: 292 SCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
CG S+ALT+ G ++++G+GD+ RLG+G V +P V
Sbjct: 2020 ECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVV 2060
Score = 358 (131.1 bits), Expect = 8.1e-31, P = 8.1e-31
Identities = 99/320 (30%), Positives = 161/320 (50%)
Query: 61 TENIPSQVNALSNTKIVQAAI--GGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGR 118
T IP Q+ ALS+ + + A+ GG H A+ G+ ++WG + G+ G D R
Sbjct: 1841 TVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPR 1900
Query: 119 ILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----WPPGDIKQISVPV 174
++ + + +R +R +A G +HS LT G ++TWG GD P
Sbjct: 1901 LI--EALKTKR------IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 1952
Query: 175 RVQGL--EQVKLIAVGA--FHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLS 230
V+ L +V +A G+ LAL ++G +++WG+ ++G+LG G ++ + P ++ L+
Sbjct: 1953 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 2012
Query: 231 GLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQ 290
G + I G S ALT G V+ WG+G++ RLG G + K PQ V L G+ IV
Sbjct: 2013 GQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK--PQVVEGLRGKKIVH 2070
Query: 291 VSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRW 350
V+ G H +A+T G ++++G DHG+ G G +P V G++ +
Sbjct: 2071 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLV-----------QGLEGQK 2119
Query: 351 IAKLVACGGRHTLAIVEWQT 370
I + VACG H++A W T
Sbjct: 2120 ITR-VACGSSHSVA---WTT 2135
Score = 338 (124.0 bits), Expect = 1.1e-34, Sum P(2) = 1.1e-34
Identities = 83/261 (31%), Positives = 133/261 (50%)
Query: 84 WHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAA-G 142
W L+ G Y WG N GQ G K + +P C +R V G
Sbjct: 2754 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAK----------VKVPTPCEALATLRPVQLIG 2802
Query: 143 GTHSV-VLTREGHVWTWGQPWPP----GDIKQISVPVRVQGLEQV--KLIAV--GAFHNL 193
G ++ +T +G ++ G G + +S P ++ ++ V K +AV G H L
Sbjct: 2803 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCL 2862
Query: 194 ALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEV 253
AL +G +++WG E G+LG G+ P +P ++ L G+ +VD+AAGG HS +T G++
Sbjct: 2863 ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 2922
Query: 254 YGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGG--THSVALTRDGHIFSFG 311
Y WG+G +GRLG D++ K P+ V L G ++ ++CG ++ LT D ++S+G
Sbjct: 2923 YTWGKGRYGRLGHSDSEDQLK--PKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWG 2980
Query: 312 RGDHGRLGYGRKVTTGQPMEV 332
GD+G+LG G PM++
Sbjct: 2981 DGDYGKLGRGGSDGCKVPMKI 3001
Score = 338 (124.0 bits), Expect = 1.1e-28, P = 1.1e-28
Identities = 100/323 (30%), Positives = 154/323 (47%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVC-VVKALEPYKVRSVV--AGSRNSLAICDDGKT---- 59
+ + G +G+LG+G + + + AL Y V+ V +G R++ A+ DGK
Sbjct: 1822 VYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 1881
Query: 60 -----KTENI-------PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 107
K + P + AL +I A G H A+ G Y WG EYG+ G
Sbjct: 1882 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 1941
Query: 108 EEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGG--THSVVLTREGHVWTWGQ----P 161
D+T ++ + + + ++I QVA G ++ LT EG V++WG
Sbjct: 1942 HG----DNTTQLKPKMVKV--LLGHRVI--QVACGSRDAQTLALTDEGLVFSWGDGDFGK 1993
Query: 162 WPPGDIKQISVPVRVQGL--EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQP 219
G + ++P ++ L + V I GA +LAL + G +W WG +Y +LG G
Sbjct: 1994 LGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 2053
Query: 220 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 279
+P V+GL G +V +A G H A+TD G+VY WG +HG+ G G + K P
Sbjct: 2054 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK--PTL 2111
Query: 280 VNLLAGEDIVQVSCGGTHSVALT 302
V L G+ I +V+CG +HSVA T
Sbjct: 2112 VQGLEGQKITRVACGSSHSVAWT 2134
Score = 322 (118.4 bits), Expect = 5.4e-27, P = 5.4e-27
Identities = 91/269 (33%), Positives = 137/269 (50%)
Query: 113 KDDTGRILRRDIVIPQ--RCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIK-- 168
KD G + I +P L V QVA G +T EG V++ G+ G +
Sbjct: 1778 KDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEA-TNGRLGLG 1836
Query: 169 ----QISVPVRVQGLEQ--VKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPR 220
+ +P ++ L VK +AV G H AL DG +++WG + G+LG
Sbjct: 1837 MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC 1896
Query: 221 SQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV 280
+P ++ L + DIA G HS ALT GE+Y WG GE+GRLG GDN ++++ P+ V
Sbjct: 1897 DKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN--TTQLKPKMV 1954
Query: 281 NLLAGEDIVQVSCGG--THSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPA 338
+L G ++QV+CG ++ALT +G +FS+G GD G+LG G + +P NI
Sbjct: 1955 KVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS----EGCNIPQNIE- 2009
Query: 339 PRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
R G GV + + CG + +LA+ +
Sbjct: 2010 -RLNGQGVCQ------IECGAQFSLALTK 2031
Score = 194 (73.4 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 54/169 (31%), Positives = 83/169 (49%)
Query: 199 GALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGR 258
G ++ WG+N GQLG + P P + L+ L V + G A+T DG++Y G
Sbjct: 2762 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 2821
Query: 259 GEHGRLGFGDNDKSSKMVPQKVNLLAGEDI--VQVSCGGTHSVALTRDGHIFSFGRGDHG 316
G GRLG G + S P + + I V V+ GG H +AL+ +G ++S+G + G
Sbjct: 2822 GAGGRLGIGGTESVS--TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 2879
Query: 317 RLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
+LG+G + P + P I + R + VD VA GG H+ +
Sbjct: 2880 KLGHGNR----SPCDRPRVIESLRGI-EVVD-------VAAGGAHSACV 2916
Score = 194 (73.4 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 45/131 (34%), Positives = 71/131 (54%)
Query: 201 LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGE 260
++ WG N+ QLG P + LS L +V +A G A+T +G+VY G
Sbjct: 1770 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 1829
Query: 261 HGRLGFGDNDKSSKMVPQKVNLLAGEDI--VQVSCGGTHSVALTRDGHIFSFGRGDHGRL 318
+GRLG G + + +P+++ L+ + V V GG H+ ALT DG +FS+G GD G+L
Sbjct: 1830 NGRLGLGMSS-GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 1888
Query: 319 GYGRKVTTGQP 329
G+ ++ +P
Sbjct: 1889 GHFSRMNCDKP 1899
Score = 91 (37.1 bits), Expect = 1.1e-34, Sum P(2) = 1.1e-34
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNS--LAICDDG 57
+ S+ + WG GE G+LG G+N + +VK L ++V V GSR++ LA+ D+G
Sbjct: 1923 LTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 1981
Score = 75 (31.5 bits), Expect = 5.3e-33, Sum P(2) = 5.3e-33
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 1 MASTTS--IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLA 52
+A T S + AWG + GQ G G +V+ LE K+ V GS +S+A
Sbjct: 2079 LAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2132
>RGD|1310971 [details] [associations]
symbol:Herc4 "HECT and RLD domain containing E3 ubiquitin
protein ligase 4" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IBA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA;ISO;ISS]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143 RGD:1310971
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 GeneTree:ENSGT00660000095216
HOGENOM:HOG000208452 HOVERGEN:HBG050878 HSSP:Q9UEP9 CTD:26091
KO:K10615 OMA:KLVIQPT OrthoDB:EOG44XJG1 EMBL:BC087104
IPI:IPI00360837 RefSeq:NP_001012074.1 UniGene:Rn.18143
ProteinModelPortal:Q5PQN1 PhosphoSite:Q5PQN1 PRIDE:Q5PQN1
Ensembl:ENSRNOT00000051367 GeneID:309758 KEGG:rno:309758
UCSC:RGD:1310971 InParanoid:Q5PQN1 NextBio:661276
ArrayExpress:Q5PQN1 Genevestigator:Q5PQN1 Uniprot:Q5PQN1
Length = 1057
Score = 408 (148.7 bits), Expect = 6.5e-37, P = 6.5e-37
Identities = 102/310 (32%), Positives = 162/310 (52%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P + + N K+ G H + V D G Y G N+ GQ G E RK +++ D
Sbjct: 25 PRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPE-QVVALD- 82
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG-----QPWPPGDIKQISVPVRVQGL 179
A ++ V+ G H++ L +G V+ WG Q G + I VP ++ L
Sbjct: 83 ------AQNIVA--VSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL 134
Query: 180 EQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTG-DTQPRSQPIPVQGLSGLTLVD 236
++++ V G +H+LAL + ++ WG N+YGQLG G + Q ++ P ++ L G+ +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQ 194
Query: 237 IAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGT 296
+AAGG HS LT G ++GWGR + G+LG ND++ + VP + L + IV + CG
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL--NDENDRYVPNLLKSLRSQKIVYICCGED 252
Query: 297 HSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVA 356
H+ ALT++G +F+FG G +G+LG+ T+ + IN PR + + I +A
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNS--TSHE-----IN---PRKVFELMGS--IVTQIA 300
Query: 357 CGGRHTLAIV 366
CG +HT A V
Sbjct: 301 CGRQHTSAFV 310
Score = 390 (142.3 bits), Expect = 5.5e-35, P = 5.5e-35
Identities = 115/355 (32%), Positives = 174/355 (49%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKA--LEPYKVRSVVAGSRNSLAICDDGKT----- 59
++ WG+ GQLG+G +E + K+ KVR V G R+++ + DDG
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 60 ---------KTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEP 110
K+ P QV AL IV + G H LA++D+G+ YAWG + GQ G +
Sbjct: 61 NDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQG 120
Query: 111 ERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI--- 167
++ R+ R+I + + + QVA G HS+ L++ V+ WGQ G +
Sbjct: 121 S--EECIRV-PRNI----KSLSDIQIVQVACGYYHSLALSKASEVFCWGQN-KYGQLGLG 172
Query: 168 ----KQISVPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS 221
KQ S P ++ L + +A G H+ L GA++ WG N++GQLG D R
Sbjct: 173 IECQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 222 QPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVN 281
P ++ L +V I G H+ ALT +G V+ +G G +G+LG N S ++ P+KV
Sbjct: 232 VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH--NSTSHEINPRKVF 289
Query: 282 LLAGEDIVQVSCGGTHSVALT-RDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPIN 335
L G + Q++CG H+ A G I+SFG G +G+LG G P V N
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>UNIPROTKB|E1BAV2 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0007283 GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:DAAA02061808 EMBL:DAAA02061809 EMBL:DAAA02061810
IPI:IPI00839181 RefSeq:NP_001070362.2 UniGene:Bt.15687
Ensembl:ENSBTAT00000018639 GeneID:533336 KEGG:bta:533336
NextBio:20876005 ArrayExpress:E1BAV2 Uniprot:E1BAV2
Length = 1057
Score = 405 (147.6 bits), Expect = 1.4e-36, P = 1.4e-36
Identities = 103/310 (33%), Positives = 162/310 (52%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P + + N K+ G H + V D G Y G N+ GQ G E RK +++ D
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPE-QVVALD- 82
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG-----QPWPPGDIKQISVPVRVQGL 179
A ++ V+ G H++ L +G V+ WG Q G + I VP ++ L
Sbjct: 83 ------AQNIVA--VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 180 EQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTG-DTQPRSQPIPVQGLSGLTLVD 236
++++ V G +H+LAL + ++ WG N+YGQLG G D + ++ P ++ L G+ +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQ 194
Query: 237 IAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGT 296
IAAGG HS LT G ++GWGR + G+LG ND++ + VP + L + IV + CG
Sbjct: 195 IAAGGAHSFVLTLSGAIFGWGRNKFGQLGL--NDENDRYVPNLLKSLRTQKIVYICCGED 252
Query: 297 HSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVA 356
H+ ALT++G +F+FG G +G+LG+ T+ + IN PR + + I +A
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNS--TSHE-----IN---PRKVFELMGS--IVTQIA 300
Query: 357 CGGRHTLAIV 366
CG +HT A V
Sbjct: 301 CGRQHTSAFV 310
Score = 388 (141.6 bits), Expect = 9.0e-35, P = 9.0e-35
Identities = 115/353 (32%), Positives = 173/353 (49%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKA--LEPYKVRSVVAGSRNSLAICDDGKT----- 59
++ WG+ GQLG+G +E + K+ KVR V G R+++ + DDG
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 60 ---------KTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEP 110
K+ P QV AL IV + G H LA++D+G+ YAWG + GQ G
Sbjct: 61 NDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
Query: 111 ERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP--WPPG--- 165
++ R+ R+I + + + QVA G HS+ L++ V+ WGQ G
Sbjct: 121 S--EECIRV-PRNI----KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGI 173
Query: 166 DIKQISVPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQP 223
D K+ + P ++ L + IA G H+ L GA++ WG N++GQLG D R P
Sbjct: 174 DCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233
Query: 224 IPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLL 283
++ L +V I G H+ ALT +G V+ +G G +G+LG N S ++ P+KV L
Sbjct: 234 NLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH--NSTSHEINPRKVFEL 291
Query: 284 AGEDIVQVSCGGTHSVALT-RDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPIN 335
G + Q++CG H+ A G I+SFG G +G+LG G P V N
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>UNIPROTKB|E2RFW5 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 EMBL:AAEX03002773
GeneID:479225 KEGG:cfa:479225 RefSeq:XP_536367.2
Ensembl:ENSCAFT00000021404 Uniprot:E2RFW5
Length = 1049
Score = 404 (147.3 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 102/310 (32%), Positives = 162/310 (52%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P + + N K+ G H + V D G Y G N+ GQ G E RK +++ D
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPE-QVVALD- 82
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG-----QPWPPGDIKQISVPVRVQGL 179
A ++ V+ G H++ L +G V+ WG Q G + I VP ++ L
Sbjct: 83 ------AQNIVA--VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 180 EQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTG-DTQPRSQPIPVQGLSGLTLVD 236
++++ V G +H+LAL + ++ WG N+YGQLG G D + ++ P ++ L G+ +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQ 194
Query: 237 IAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGT 296
+AAGG HS LT G ++GWGR + G+LG ND++ + VP + L + IV + CG
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL--NDENDRYVPNLLKSLRTQKIVYICCGED 252
Query: 297 HSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVA 356
H+ ALT++G +F+FG G +G+LG+ T+ + IN PR + + I +A
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNS--TSHE-----IN---PRKVFELMGS--IVTQIA 300
Query: 357 CGGRHTLAIV 366
CG +HT A V
Sbjct: 301 CGRQHTSAFV 310
Score = 387 (141.3 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 114/353 (32%), Positives = 173/353 (49%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKA--LEPYKVRSVVAGSRNSLAICDDGKT----- 59
++ WG+ GQLG+G +E + K+ KVR V G R+++ + DDG
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 60 ---------KTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEP 110
K+ P QV AL IV + G H LA++D+G+ YAWG + GQ G
Sbjct: 61 NDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
Query: 111 ERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP--WPPG--- 165
++ R+ R+I + + + QVA G HS+ L++ V+ WGQ G
Sbjct: 121 S--EECIRV-PRNI----KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGI 173
Query: 166 DIKQISVPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQP 223
D K+ + P ++ L + +A G H+ L GA++ WG N++GQLG D R P
Sbjct: 174 DCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233
Query: 224 IPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLL 283
++ L +V I G H+ ALT +G V+ +G G +G+LG N S ++ P+KV L
Sbjct: 234 NLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH--NSTSHEINPRKVFEL 291
Query: 284 AGEDIVQVSCGGTHSVALT-RDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPIN 335
G + Q++CG H+ A G I+SFG G +G+LG G P V N
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>UNIPROTKB|E2RFV1 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:AAEX03002773 RefSeq:XP_849808.1 Ensembl:ENSCAFT00000021413
GeneID:479225 KEGG:cfa:479225 NextBio:20854436 Uniprot:E2RFV1
Length = 1057
Score = 404 (147.3 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 102/310 (32%), Positives = 162/310 (52%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P + + N K+ G H + V D G Y G N+ GQ G E RK +++ D
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPE-QVVALD- 82
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG-----QPWPPGDIKQISVPVRVQGL 179
A ++ V+ G H++ L +G V+ WG Q G + I VP ++ L
Sbjct: 83 ------AQNIVA--VSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL 134
Query: 180 EQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTG-DTQPRSQPIPVQGLSGLTLVD 236
++++ V G +H+LAL + ++ WG N+YGQLG G D + ++ P ++ L G+ +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQ 194
Query: 237 IAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGT 296
+AAGG HS LT G ++GWGR + G+LG ND++ + VP + L + IV + CG
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL--NDENDRYVPNLLKSLRTQKIVYICCGED 252
Query: 297 HSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVA 356
H+ ALT++G +F+FG G +G+LG+ T+ + IN PR + + I +A
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNS--TSHE-----IN---PRKVFELMGS--IVTQIA 300
Query: 357 CGGRHTLAIV 366
CG +HT A V
Sbjct: 301 CGRQHTSAFV 310
Score = 387 (141.3 bits), Expect = 1.2e-34, P = 1.2e-34
Identities = 114/353 (32%), Positives = 173/353 (49%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKA--LEPYKVRSVVAGSRNSLAICDDGKT----- 59
++ WG+ GQLG+G +E + K+ KVR V G R+++ + DDG
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 60 ---------KTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEP 110
K+ P QV AL IV + G H LA++D+G+ YAWG + GQ G
Sbjct: 61 NDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
Query: 111 ERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP--WPPG--- 165
++ R+ R+I + + + QVA G HS+ L++ V+ WGQ G
Sbjct: 121 S--EECIRV-PRNI----KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGI 173
Query: 166 DIKQISVPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQP 223
D K+ + P ++ L + +A G H+ L GA++ WG N++GQLG D R P
Sbjct: 174 DCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233
Query: 224 IPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLL 283
++ L +V I G H+ ALT +G V+ +G G +G+LG N S ++ P+KV L
Sbjct: 234 NLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH--NSTSHEINPRKVFEL 291
Query: 284 AGEDIVQVSCGGTHSVALT-RDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPIN 335
G + Q++CG H+ A G I+SFG G +G+LG G P V N
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>UNIPROTKB|Q5GLZ8 [details] [associations]
symbol:HERC4 "Probable E3 ubiquitin-protein ligase HERC4"
species:9606 "Homo sapiens" [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0007283
"spermatogenesis" evidence=ISS] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 HOGENOM:HOG000208452
HOVERGEN:HBG050878 EMBL:AY221963 EMBL:AY650032 EMBL:AY650033
EMBL:AY650034 EMBL:AB046813 EMBL:AL356741 EMBL:AC024258
EMBL:AL133551 EMBL:BC039600 IPI:IPI00333067 IPI:IPI00552050
IPI:IPI00604497 IPI:IPI00827523 IPI:IPI00827948 IPI:IPI00827992
RefSeq:NP_056416.2 RefSeq:NP_071362.1 UniGene:Hs.51891 HSSP:Q9UEP9
ProteinModelPortal:Q5GLZ8 SMR:Q5GLZ8 IntAct:Q5GLZ8 STRING:Q5GLZ8
PhosphoSite:Q5GLZ8 DMDM:74707832 PaxDb:Q5GLZ8 PRIDE:Q5GLZ8
DNASU:26091 Ensembl:ENST00000277817 Ensembl:ENST00000373700
Ensembl:ENST00000395187 Ensembl:ENST00000395198
Ensembl:ENST00000412272 Ensembl:ENST00000473533
Ensembl:ENST00000492996 GeneID:26091 KEGG:hsa:26091 UCSC:uc001jng.4
UCSC:uc001jnh.4 UCSC:uc001jnk.3 UCSC:uc009xpr.3 CTD:26091
GeneCards:GC10M069681 HGNC:HGNC:24521 HPA:HPA045453 MIM:609248
neXtProt:NX_Q5GLZ8 PharmGKB:PA134949021 InParanoid:Q5GLZ8 KO:K10615
ChiTaRS:HERC4 GenomeRNAi:26091 NextBio:48027 ArrayExpress:Q5GLZ8
Bgee:Q5GLZ8 CleanEx:HS_HERC4 Genevestigator:Q5GLZ8 Uniprot:Q5GLZ8
Length = 1057
Score = 401 (146.2 bits), Expect = 3.6e-36, P = 3.6e-36
Identities = 101/310 (32%), Positives = 162/310 (52%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P + + N ++ G H + V D G Y G N+ GQ G E RK +++ D
Sbjct: 25 PRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPE-QVVALD- 82
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG-----QPWPPGDIKQISVPVRVQGL 179
A ++ V+ G H++ L +G V+ WG Q G + I VP ++ L
Sbjct: 83 ------AQNIVA--VSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL 134
Query: 180 EQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTG-DTQPRSQPIPVQGLSGLTLVD 236
++++ V G +H+LAL + ++ WG N+YGQLG G D + ++ P ++ L G+ +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQ 194
Query: 237 IAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGT 296
+AAGG HS LT G ++GWGR + G+LG ND++ + VP + L + IV + CG
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL--NDENDRYVPNLLKSLRSQKIVYICCGED 252
Query: 297 HSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVA 356
H+ ALT++G +F+FG G +G+LG+ T+ + IN PR + + I +A
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNS--TSHE-----IN---PRKVFELMGS--IVTEIA 300
Query: 357 CGGRHTLAIV 366
CG +HT A V
Sbjct: 301 CGRQHTSAFV 310
Score = 382 (139.5 bits), Expect = 4.0e-34, P = 4.0e-34
Identities = 112/353 (31%), Positives = 173/353 (49%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKA--LEPYKVRSVVAGSRNSLAICDDGKT----- 59
++ WG+ GQLG+G +E + K+ +VR V G R+++ + DDG
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 60 ---------KTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEP 110
K+ P QV AL IV + G H LA++D+G+ YAWG + GQ G
Sbjct: 61 NDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG 120
Query: 111 ERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP--WPPG--- 165
++ R+ R+I + + + QVA G HS+ L++ V+ WGQ G
Sbjct: 121 S--EECIRV-PRNI----KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGT 173
Query: 166 DIKQISVPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQP 223
D K+ + P ++ L + +A G H+ L GA++ WG N++GQLG D R P
Sbjct: 174 DCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233
Query: 224 IPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLL 283
++ L +V I G H+ ALT +G V+ +G G +G+LG N S ++ P+KV L
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH--NSTSHEINPRKVFEL 291
Query: 284 AGEDIVQVSCGGTHSVALT-RDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPIN 335
G + +++CG H+ A G I+SFG G +G+LG G P V N
Sbjct: 292 MGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>UNIPROTKB|F1NCH3 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:KLVIQPT EMBL:AADN02028016 IPI:IPI00586918
Ensembl:ENSGALT00000006135 ArrayExpress:F1NCH3 Uniprot:F1NCH3
Length = 1048
Score = 397 (144.8 bits), Expect = 9.6e-36, P = 9.6e-36
Identities = 100/310 (32%), Positives = 160/310 (51%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P + + N +I G H + V D G Y G N+ GQ G E RK R
Sbjct: 25 PRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKARK--------RPE 76
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG-----QPWPPGDIKQISVPVRVQGL 179
+ A ++ V+ G H++ L +G V+ WG Q PG + I VP ++ L
Sbjct: 77 HVGALDAQNIVA--VSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSL 134
Query: 180 EQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTG-DTQPRSQPIPVQGLSGLTLVD 236
+++++ V G +H+LAL + +++WG N+YGQLG G + + ++ P ++ L G+
Sbjct: 135 SEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQ 194
Query: 237 IAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGT 296
IAAGG HS LT G ++GWGR + G+LG ND + + VP + L + +V + CG
Sbjct: 195 IAAGGAHSFVLTLSGAIFGWGRNKFGQLGL--NDDNDRYVPTLLKSLRTQKVVHICCGED 252
Query: 297 HSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVA 356
H+ ALT++G +F+FG G +G+LG+ T+ + IN PR + + + +
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNS--TSHE-----IN---PRKVFELMGS--LVTQIT 300
Query: 357 CGGRHTLAIV 366
CG +HT A V
Sbjct: 301 CGRQHTTAFV 310
Score = 380 (138.8 bits), Expect = 6.4e-34, P = 6.4e-34
Identities = 112/353 (31%), Positives = 173/353 (49%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKA--LEPYKVRSVVAGSRNSLAICDDGKT----- 59
++ WG+ GQLG+G +E + K+ ++R V G R+++ + DDG
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 60 ---------KTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEP 110
K P V AL IV + G H LA++D+G+ YAWG GQ G P
Sbjct: 61 NDLGQLGHEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL-P 119
Query: 111 ERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP--WPPG--- 165
++ R+ R+I + ++ + QVA G HS+ L++ V++WGQ G
Sbjct: 120 GTEECI-RV-PRNI----KSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGY 173
Query: 166 DIKQISVPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQP 223
+ K+ + P ++ L + IA G H+ L GA++ WG N++GQLG D R P
Sbjct: 174 EYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVP 233
Query: 224 IPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLL 283
++ L +V I G H+ ALT +G V+ +G G +G+LG N S ++ P+KV L
Sbjct: 234 TLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGH--NSTSHEINPRKVFEL 291
Query: 284 AGEDIVQVSCGGTHSVALT-RDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPIN 335
G + Q++CG H+ A G I+SFG G +G+LG G P V N
Sbjct: 292 MGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGN 344
Score = 278 (102.9 bits), Expect = 5.2e-23, P = 5.2e-23
Identities = 78/252 (30%), Positives = 116/252 (46%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPE-RKDD 115
G + +P + +LS +IVQ A G +H LA+ ++WG N+YGQ G E +K +
Sbjct: 120 GTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQN 179
Query: 116 TGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQIS 171
+ +++ + IP Q+AAGG HS VLT G ++ WG+ D
Sbjct: 180 SPHVIKSLLGIP--------FAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRY 231
Query: 172 VPVRVQGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGL 229
VP ++ L K++ + G H AL ++G ++ +G YGQLG T P V L
Sbjct: 232 VPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291
Query: 230 SGLTLVDIAAGGWHSTALT-DDGEVYGWGRGEHGRLGFG--DNDKS-----SKMVPQKVN 281
G + I G H+TA G +Y +G G +G+LG G N KS +P
Sbjct: 292 MGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGNWLPYSTQ 351
Query: 282 LLAGEDIVQVSC 293
L D Q C
Sbjct: 352 CLIPADSEQYYC 363
>FB|FBgn0031107 [details] [associations]
symbol:HERC2 "HECT and RLD domain containing protein 2
ortholog (H. sapiens)" species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;NAS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0020037 "heme binding" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF06701 PROSITE:PS50237 PROSITE:PS51416
SMART:SM00119 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0005814 GO:GO:0046872
EMBL:AE014298 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR000859 SUPFAM:SSF49854 GO:GO:0042787
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00700000104208 EMBL:AY113293 EMBL:AF189221
RefSeq:NP_608388.2 UniGene:Dm.3302 ProteinModelPortal:Q9VR91
SMR:Q9VR91 IntAct:Q9VR91 STRING:Q9VR91 PaxDb:Q9VR91
EnsemblMetazoa:FBtr0301344 GeneID:33035 KEGG:dme:Dmel_CG11734
UCSC:CG11734-RB CTD:8924 FlyBase:FBgn0031107 InParanoid:Q9VR91
KO:K10595 OMA:QLAFTRD OrthoDB:EOG48GTJ3 PhylomeDB:Q9VR91
GenomeRNAi:33035 NextBio:781623 Bgee:Q9VR91 GermOnline:CG11734
Uniprot:Q9VR91
Length = 4912
Score = 404 (147.3 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 118/396 (29%), Positives = 181/396 (45%)
Query: 5 TSIIAWGSGEDGQLG--IGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK---- 58
++I WG GQLG G+ + C +AL + + G ++ A+ DGK
Sbjct: 4049 STIYGWGHNHRGQLGGLEGSRIKTPTPC--EALSLLRPVQLAGGEQSLFAVTPDGKLFAT 4106
Query: 59 ------------TKTENIPSQVNALSNTKIVQAAI--GGWHCLAVDDQGRAYAWGGNEYG 104
+ + IP+ + +L + + + A+ GG HCLA+ +G YAWG E G
Sbjct: 4107 GYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 4166
Query: 105 QCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP--- 161
+ G D +++ + V +A G HS +T GHV TWG+
Sbjct: 4167 KLGHGNRMSYDRPKLVEH--------LNGMSVADIACGSAHSAAITASGHVLTWGKGRYG 4218
Query: 162 -WPPGDIKQISVPVRVQGLEQVKLIAV----GAFHNLALQEDGALWAWGNNEYGQLGTGD 216
GD + P V+ L + I + G L + +D +W+WG+ +YG+LG G
Sbjct: 4219 RLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG 4278
Query: 217 TQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMV 276
+ P ++ L+GL +V + G S ALT G VY WG+G+ RLG G D +
Sbjct: 4279 SDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRR-- 4336
Query: 277 PQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINI 336
P+KV L G+ I+ ++ G H VA + G ++++G D G+LG G VT I
Sbjct: 4337 PKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGT-VTA---------I 4386
Query: 337 PAPRNAGDGVDRRWIAKLVACGGRHTLAIVEWQTEE 372
PR + + I K V CG HTLA+ Q E
Sbjct: 4387 QRPRLVA-ALQGKHIVK-VTCGSAHTLALSTSQLSE 4420
Score = 376 (137.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 111/385 (28%), Positives = 182/385 (47%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTK----- 60
+++ WG + QLG + + + + + + GS++ + DGK
Sbjct: 2987 TVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEG 3046
Query: 61 ---------TENIP--SQVNALSNTKIVQAAI--GGWHCLAVDDQGRAYAWGGNEYGQCG 107
T N+P Q+ L + + A+ GG H LA+ G+ ++WG E G+ G
Sbjct: 3047 TNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLG 3106
Query: 108 EEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----WP 163
D R++ R A K +R VA G +HS ++ +G ++TWG
Sbjct: 3107 HGNRTTLDKPRLVEA-----LR-AKK--IRDVACGSSHSAAISSQGELYTWGLGEYGRLG 3158
Query: 164 PGDIKQISVPVRVQGL--EQVKLIAVGA--FHNLALQEDGALWAWGNNEYGQLGTGDTQP 219
GD P V L +V +A G+ LAL EDGA+++WG+ ++G+LG G ++
Sbjct: 3159 HGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEG 3218
Query: 220 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 279
P ++ LSG+ +V I G S ALT GEV+ WG+G++ RLG G + K PQ
Sbjct: 3219 SDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRK--PQP 3276
Query: 280 VNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
+ L G ++ V+ G H +A+T G ++++G DHG+ G G +P V
Sbjct: 3277 IGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVI------ 3330
Query: 340 RNAGDGVDRRWIAKLVACGGRHTLA 364
G+D ++ + VACG H++A
Sbjct: 3331 -----GLDAVFVNR-VACGSSHSIA 3349
Score = 363 (132.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 100/317 (31%), Positives = 162/317 (51%)
Query: 64 IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRD 123
+P+ +S + + A G V G+ YA CGE + G + +
Sbjct: 3009 VPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYA--------CGEGTNGRLGLG--VTHN 3058
Query: 124 IVIPQRCAPKL---IVRQVA--AGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPV 174
+ +P + P L +V++VA +GG H++ LT +G V++WG+ G+ + P
Sbjct: 3059 VPLPHQL-PVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPR 3117
Query: 175 RVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGL 232
V+ L K+ +A G+ H+ A+ G L+ WG EYG+LG GD + +P V L+G
Sbjct: 3118 LVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGR 3177
Query: 233 TLVDIAAGGW--HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQ 290
+V +A G + ALT+DG V+ WG G+ G+LG G ++ S P ++ L+G +VQ
Sbjct: 3178 RVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSD--TPHEIERLSGIGVVQ 3235
Query: 291 VSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRW 350
+ CG S+ALTR G ++++G+GD+ RLG+G G ++ P+ G RR
Sbjct: 3236 IECGAQFSLALTRAGEVWTWGKGDYYRLGHG-----GDQ-----HVRKPQPIGGLRGRRV 3285
Query: 351 IAKLVACGGRHTLAIVE 367
I VA G H LA+ +
Sbjct: 3286 IH--VAVGALHCLAVTD 3300
Score = 276 (102.2 bits), Expect = 5.7e-22, P = 5.7e-22
Identities = 98/362 (27%), Positives = 159/362 (43%)
Query: 8 IAWGSGEDGQLGIGNNEEREWV---CVVKALE-PYKVRSVVAGSRNSLAICDDGK----- 58
+ W S Q G W V L ++++ V L + +GK
Sbjct: 538 LGWPSLSKDQQGFSAEPTLSWSGESAGVPTLSCRFQIKQVACCETQMLILSQEGKLYTWR 597
Query: 59 -TKTENIPSQVNALSNTKIVQAA--IGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDD 115
K E P + +++ + A G H LA+D AY+WG E + G D
Sbjct: 598 LAKPEAEPLPMEEVAHDVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHG----DT 653
Query: 116 TGRILRRDIV-IPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPP----GDIKQI 170
R + I + Q C V+ V G ++S +T G++ TWG+ G+
Sbjct: 654 HARAVPTKIAALEQHC-----VQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDR 708
Query: 171 SVPVRVQGLEQVKLIAV----GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPV 226
S+P V L ++ V G H+LAL +G ++AWG+ +YG+LG G+ QPI V
Sbjct: 709 SLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILV 768
Query: 227 QGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSK--MVPQKVNLLA 284
+ L + V AG S AL+ +G++Y WG+ LG ++S + VP+ V+ L
Sbjct: 769 ESLPRVQRV--FAGSQFSVALSSEGQLYTWGKATC--LGHQLVERSVQGCSVPRLVSSLQ 824
Query: 285 GEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGD 344
+ IV V+ H +AL+ G +F +GR D ++ V++ + PI + P
Sbjct: 825 HKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI-CPASVSSEPLLRTPILVSLPTFPAS 883
Query: 345 GV 346
G+
Sbjct: 884 GI 885
Score = 213 (80.0 bits), Expect = 2.6e-25, Sum P(2) = 2.6e-25
Identities = 59/176 (33%), Positives = 94/176 (53%)
Query: 194 ALQEDGA--LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDG 251
AL GA ++ WG+N GQLG + P P + LS L V +A G A+T DG
Sbjct: 4042 ALSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDG 4101
Query: 252 EVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDI--VQVSCGGTHSVALTRDGHIFS 309
+++ G G GRLG G +D S +P + L + V V+ GG H +ALT +G +++
Sbjct: 4102 KLFATGYGSGGRLGVGGSD--SWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYA 4159
Query: 310 FGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
+G G+ G+LG+G +++ +P V ++ +G+ +A +ACG H+ AI
Sbjct: 4160 WGEGEDGKLGHGNRMSYDRPKLVE-HL-------NGMS---VAD-IACGSAHSAAI 4203
Score = 166 (63.5 bits), Expect = 2.6e-25, Sum P(2) = 2.6e-25
Identities = 64/234 (27%), Positives = 106/234 (45%)
Query: 3 STTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAI-CDD----- 56
S + +WG+GED +LG G+ R + ALE + V+SV G S AI C
Sbjct: 633 SNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTW 692
Query: 57 ----------GKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQC 106
G + ++P+ V ALS+ +V A+G ++ + + G
Sbjct: 693 GRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGD-GDY 751
Query: 107 GEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPG- 165
G+ + G + + I++ P+ V++V AG SV L+ EG ++TWG+ G
Sbjct: 752 GKLGNGNCN-GSL--QPILVES--LPR--VQRVFAGSQFSVALSSEGQLYTWGKATCLGH 804
Query: 166 -----DIKQISVPVRVQGLEQVKLI--AVGAFHNLALQEDGALWAWGNNEYGQL 212
++ SVP V L+ +++ AV H LAL G ++ WG N+ Q+
Sbjct: 805 QLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI 858
Score = 133 (51.9 bits), Expect = 7.4e-22, Sum P(2) = 7.4e-22
Identities = 47/172 (27%), Positives = 78/172 (45%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTK 60
+ S + AWG G+ G+LG GN +V++L P +V+ V AGS+ S+A+ +G+
Sbjct: 737 LTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESL-P-RVQRVFAGSQFSVALSSEGQLY 794
Query: 61 T------------E------NIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNE 102
T E ++P V++L + +IV A+ HCLA+ G + WG N+
Sbjct: 795 TWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRND 854
Query: 103 YGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGH 154
Q + +LR I++ P +A S+V T+ H
Sbjct: 855 SQQICPASVSSEP---LLRTPILVS---LPTFPASGIACTSAQSLVWTQSSH 900
Score = 85 (35.0 bits), Expect = 7.4e-17, Sum P(2) = 7.4e-17
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNS--LAICDDG 57
++S + WG GE G+LG G+N + +V AL +V V GSR++ LA+ +DG
Sbjct: 3140 ISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDG 3198
Score = 49 (22.3 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 167 IKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTG 215
+KQ S ++ G + KL+ +G + GA W WG+ + G G
Sbjct: 1907 LKQKSSKAQLSGPDLAKLMKIGT--RIVR---GADWKWGDQDGNPPGEG 1950
>ZFIN|ZDB-GENE-090313-139 [details] [associations]
symbol:herc3 "hect domain and RLD 3" species:7955
"Danio rerio" [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090313-139
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 CTD:8916 HOGENOM:HOG000208452
HOVERGEN:HBG050878 OMA:SPAVDFR OrthoDB:EOG4RBQHS EMBL:CU467858
IPI:IPI00901161 RefSeq:NP_001139096.1 UniGene:Dr.86009
Ensembl:ENSDART00000112994 Ensembl:ENSDART00000141977
GeneID:100003587 NextBio:20785898 Uniprot:B8JLD4
Length = 1046
Score = 393 (143.4 bits), Expect = 2.6e-35, P = 2.6e-35
Identities = 119/390 (30%), Positives = 193/390 (49%)
Query: 7 IIAWGSGEDGQLGIGNNE----EREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKT- 61
++ WGS GQLGIG +E E CV + ++ V G+++SL + DG T
Sbjct: 2 MLCWGSSGAGQLGIGASEASVFEPRSCCV---FDGRGLKEVACGNQHSLFLLHDGSVYTC 58
Query: 62 -ENI------------PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 108
N P V AL KI + G H LAV++QG+ +AWG + GQ G
Sbjct: 59 GSNSCGQLGHDKGGSRPELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGL 118
Query: 109 EPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWP----- 163
++ R+ R +I + C + + QV G H + L+++G ++ WG+
Sbjct: 119 GTA--EEAVRVPR---LIKKLCEHR--ISQVMCGNHHCIALSKDGQLFVWGENSSGQLGL 171
Query: 164 -PGDIKQISVPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPR 220
G+ +S P ++ L + L I+ G H+ AL GA++ WG N GQLG D Q R
Sbjct: 172 GKGEPSTLS-PQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDR 230
Query: 221 SQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV 280
+ P ++ L +V I+ G H+ ALT +G ++ +G G G+LG D+ ++ + P++V
Sbjct: 231 AVPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGH-DSTRNEPL-PRRV 288
Query: 281 NLLAGEDIVQVSCGGTHSVALTRD-GHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
L G ++ Q++CG H++A G I++FG G+LG G + + P VP++ P
Sbjct: 289 MELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTGIRGSAKSP--VPVSNIQP 346
Query: 340 RNAGDGVDRR---WIAKLVACGGRHTLAIV 366
G+ R IAK+ + GG H ++
Sbjct: 347 LCIGNAYTRTEHCTIAKIHS-GGDHNFLLL 375
Score = 284 (105.0 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 74/237 (31%), Positives = 121/237 (51%)
Query: 136 VRQVAAGGTHSVVLTREGHVWTWGQP--WPPGDIKQISVPVRVQGLEQVKL--IAVGAFH 191
+++VA G HS+ L +G V+T G G K S P V L+ K+ ++ G H
Sbjct: 36 LKEVACGNQHSLFLLHDGSVYTCGSNSCGQLGHDKGGSRPELVGALDAQKISGVSCGQAH 95
Query: 192 NLALQEDGALWAWGNNEYGQLGTGDTQPRSQ-PIPVQGLSGLTLVDIAAGGWHSTALTDD 250
+LA+ E G ++AWG + GQLG G + + P ++ L + + G H AL+ D
Sbjct: 96 SLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKD 155
Query: 251 GEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSF 310
G+++ WG G+LG G + S+ + PQ + L G + Q+S GG HS AL+ G +F +
Sbjct: 156 GQLFVWGENSSGQLGLGKGEPST-LSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGW 214
Query: 311 GRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
G+ G+LG + Q VP +I R+ ++ + ++CG HT A+ +
Sbjct: 215 GKNSAGQLGLNDE----QDRAVPCHIKFLRS------QKVV--YISCGEEHTAALTK 259
>MGI|MGI:1914388 [details] [associations]
symbol:Herc6 "hect domain and RLD 6" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030332 "cyclin binding" evidence=ISO] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0045087 "innate immune response"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 MGI:MGI:1914388 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0045087
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0042787 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
CTD:55008 OMA:HIFAGTY EMBL:AC127307 EMBL:AC142212 EMBL:AK017888
EMBL:AK149648 IPI:IPI00850197 RefSeq:NP_080268.1 UniGene:Mm.297393
ProteinModelPortal:F2Z461 SMR:F2Z461 PRIDE:F2Z461
Ensembl:ENSMUST00000031817 GeneID:67138 KEGG:mmu:67138
ChiTaRS:HERC6 NextBio:323692 Bgee:F2Z461 Uniprot:F2Z461
Length = 1003
Score = 386 (140.9 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 94/265 (35%), Positives = 141/265 (53%)
Query: 65 PSQVNA-LSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRD 123
P ++ A S +++QAA G H L + R Y+ G N +GQ G+ R+D + R +
Sbjct: 12 PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQ---RRDQSTE--RPE 66
Query: 124 IVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPP----GDIKQIS-VPVRVQG 178
P + L V V+ G HSV + +G V+ WG G+ K+IS +P +++
Sbjct: 67 ---PIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKA 123
Query: 179 LEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIP--VQGLSGLTL 234
L +K+I V G +H+LAL EDG +++WG N GQLG G RSQ IP V+ L G+ L
Sbjct: 124 LAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNS-RSQAIPQKVKSLEGIPL 182
Query: 235 VDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMV-PQKVNLLAGEDIVQVSC 293
+AAGG HS AL+ G +GWG G+L N ++ P + L ++ +SC
Sbjct: 183 AQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISC 242
Query: 294 GGTHSVALTRDGHIFSFGRGDHGRL 318
G H+ LT +G +F+FG G+L
Sbjct: 243 GYEHTAVLTEEGQVFTFGGNSSGQL 267
Score = 323 (118.8 bits), Expect = 7.4e-28, P = 7.4e-28
Identities = 81/239 (33%), Positives = 125/239 (52%)
Query: 138 QVAAGGTHSVVLTREGHVWT-----WGQPWPPGDIKQISVPVRVQGLEQ--VKLIAVGAF 190
Q A+G HS++L V++ WGQ D + P +Q L V L++ G
Sbjct: 26 QAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRD-QSTERPEPIQALNDLHVDLVSCGKE 84
Query: 191 HNLALQEDGALWAWGNNEYGQLGTGDTQPRS-QPIPVQGLSGLTLVDIAAGGWHSTALTD 249
H++A+ G ++AWG GQLG G+ + S P ++ L+G+ ++ ++ G +HS AL++
Sbjct: 85 HSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSE 144
Query: 250 DGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFS 309
DG V+ WGR G+LG G N +S + +PQKV L G + QV+ GGTHS AL+ G F
Sbjct: 145 DGHVFSWGRNSEGQLGLGKNSRS-QAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFG 203
Query: 310 FGRGDHGRLGY-GRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
+G G+L G KV + + P +I A +N ++CG HT + E
Sbjct: 204 WGSNRSGQLALSGNKVK--EQIYKPHSIGALKNLS--------VIYISCGYEHTAVLTE 252
Score = 310 (114.2 bits), Expect = 1.8e-26, P = 1.8e-26
Identities = 74/204 (36%), Positives = 113/204 (55%)
Query: 162 WPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS 221
W G K + G+E ++ A G H+L L + +++ G+N +GQLG Q
Sbjct: 5 WAAGSRKPRRLKAGTSGIELLQA-ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTE 63
Query: 222 QPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVN 281
+P P+Q L+ L + ++ G HS A+ G+V+ WG G G+LG G+ + S M P K+
Sbjct: 64 RPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFM-PTKIK 122
Query: 282 LLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRN 341
LAG I+QVSCG HS+AL+ DGH+FS+GR G+LG G+ + Q IP
Sbjct: 123 ALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKN-SRSQA------IPQKVK 175
Query: 342 AGDGVDRRWIAKLVACGGRHTLAI 365
+ +G+ +A+ VA GG H+ A+
Sbjct: 176 SLEGIP---LAQ-VAAGGTHSFAL 195
Score = 230 (86.0 bits), Expect = 4.0e-16, P = 4.0e-16
Identities = 86/292 (29%), Positives = 132/292 (45%)
Query: 39 KVRSVVAGSRNSLAICDDGKTKTEN-IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYA 97
KV + AGS L I G+ K + +P+++ AL+ KI+Q + G +H LA+ + G ++
Sbjct: 94 KVFAWGAGSEGQLGI---GEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFS 150
Query: 98 WGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPK--LIVRQVAAGGTHSVVLTREGHV 155
WG N GQ G G+ R IPQ+ + + QVAAGGTHS L+ G
Sbjct: 151 WGRNSEGQLG--------LGKNSRSQ-AIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTS 201
Query: 156 WTWG-----QPWPPGD-IK-QISVPVRVQGLEQVKLIAV--GAFHNLALQEDGALWAWGN 206
+ WG Q G+ +K QI P + L+ + +I + G H L E+G ++ +G
Sbjct: 202 FGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGG 261
Query: 207 NEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALT-DDGEVYGWGRGEHGRLG 265
N GQL + P ++G+ G + I +H+ A G+V GRG
Sbjct: 262 NSSGQLQPSPRSGQRGPQLIEGIGG-RVSQIECASYHTIAYVYTTGQVVSLGRGP-SHTS 319
Query: 266 FGDNDKSSKMVPQKVNLLAGEDIVQVSC----GGTHS--VALTRDGHIFSFG 311
+ ++ LLA ED+V + G H+ V R H S G
Sbjct: 320 NPTHQEAPAENSDITCLLAAEDLVDIEVKDIFAGAHANFVTTRRVSHTRSTG 371
Score = 132 (51.5 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 48/166 (28%), Positives = 76/166 (45%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCV-VKALEPYKVRSVVAGSRNSLAICDDGKTKT--EN 63
+ AWG+G +GQLGIG +E ++ +KAL K+ V G +SLA+ +DG + N
Sbjct: 95 VFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRN 154
Query: 64 IPSQVNALSNTK---IVQA--AIGGWHCLAVDDQGR---AYAWGGNEYGQCGEEPERKDD 115
Q+ N++ I Q ++ G V G A + G +G +
Sbjct: 155 SEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLAL 214
Query: 116 TGRILRRDIVIPQRCAP--KLIVRQVAAGGTHSVVLTREGHVWTWG 159
+G ++ I P L V ++ G H+ VLT EG V+T+G
Sbjct: 215 SGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFG 260
>UNIPROTKB|F1NBC5 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AADN02016126 EMBL:AADN02016127
EMBL:AADN02016128 EMBL:AADN02016129 IPI:IPI00572483
Ensembl:ENSGALT00000016878 ArrayExpress:F1NBC5 Uniprot:F1NBC5
Length = 1050
Score = 383 (139.9 bits), Expect = 3.0e-34, P = 3.0e-34
Identities = 105/312 (33%), Positives = 154/312 (49%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P + + + + A GG H + + + G Y G N GQ G E E + +
Sbjct: 25 PQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHESEGS-------KPEP 77
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI------KQISVPVRVQG 178
+ A + IV VA G +HSV L+ +G V++WG G + ++VP ++
Sbjct: 78 I--GALAGQHIVH-VACGESHSVALSDQGQVFSWGAG-SDGQLGLTTIEDAVTVPRLIKK 133
Query: 179 LEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQP-RSQPIPVQGLSGLTLV 235
L Q ++ + G +H LAL DG + WG N YGQLG G P ++ P V+ L G+ L
Sbjct: 134 LNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLA 193
Query: 236 DIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDN-DKSSKMVPQKVNLLAGEDIVQVSCG 294
+AAGG HS AL+ G V+GWG+ G+LG D D+ S P V LL + +V +SCG
Sbjct: 194 QVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRES---PCHVKLLRSQKVVYISCG 250
Query: 295 GTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKL 354
H+ LT+ G +F+FG G G+LG+ M +N PR + +
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGH-------DSMNDEVN---PRRVLELMGSE--VSQ 298
Query: 355 VACGGRHTLAIV 366
+ACG HTLA V
Sbjct: 299 IACGRHHTLAFV 310
Score = 365 (133.5 bits), Expect = 2.6e-32, P = 2.6e-32
Identities = 106/353 (30%), Positives = 168/353 (47%)
Query: 7 IIAWGSGEDGQLGIGNNEER--EWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKTENI 64
++ WG GQ GIG+N + V + V+ V G +S+ + +DG+ T +
Sbjct: 1 MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 65 --------------PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEP 110
P + AL+ IV A G H +A+ DQG+ ++WG GQ G
Sbjct: 61 NTKGQLGHESEGSKPEPIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTT 120
Query: 111 -ERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI-- 167
E R++++ + Q+ + Q++ G H + L +G +TWGQ G +
Sbjct: 121 IEDAVTVPRLIKK---LNQQT-----ILQISCGNWHCLALAADGQFFTWGQN-SYGQLGL 171
Query: 168 -KQI---SVPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS 221
K+ + P RV+ L+ + L +A G H+ AL GA++ WG N GQLG D + R
Sbjct: 172 GKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231
Query: 222 QPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGD-NDKSSKMVPQKV 280
P V+ L +V I+ G H+ LT G V+ +G G G+LG ND+ + P++V
Sbjct: 232 SPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN---PRRV 288
Query: 281 NLLAGEDIVQVSCGGTHSVALT-RDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
L G ++ Q++CG H++A G I++FG G G+LG G P V
Sbjct: 289 LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPV 341
Score = 302 (111.4 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 78/246 (31%), Positives = 124/246 (50%)
Query: 98 WGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLI----VRQVAAGGTHSVVLTREG 153
WG + +GQ G G L+ ++IP+ I V++VA GG HSV L +G
Sbjct: 4 WGYSSFGQPG--------IGSNLQ--VIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDG 53
Query: 154 HVWTWG--QPWPPGDIKQISVPVRVQGL--EQVKLIAVGAFHNLALQEDGALWAWGNNEY 209
V+T G G + S P + L + + +A G H++AL + G +++WG
Sbjct: 54 EVYTCGLNTKGQLGHESEGSKPEPIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSD 113
Query: 210 GQLGTGDTQPR-SQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGD 268
GQLG + + P ++ L+ T++ I+ G WH AL DG+ + WG+ +G+LG G
Sbjct: 114 GQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLG- 172
Query: 269 NDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQ 328
+ S+ PQ+V L G + QV+ GG HS AL+ G +F +G+ G+LG +
Sbjct: 173 KECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRES 232
Query: 329 PMEVPI 334
P V +
Sbjct: 233 PCHVKL 238
Score = 176 (67.0 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 66/221 (29%), Positives = 98/221 (44%)
Query: 17 QLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKT-KTENIPSQVNALSNTK 75
Q+ GN W C+ A + +NS GK ++ P +V +L
Sbjct: 141 QISCGN-----WHCLALAADG----QFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIP 191
Query: 76 IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLI 135
+ Q A GG H A+ G + WG N GQ G ER ++ ++ ++ Q+
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVK--LLRSQK------ 243
Query: 136 VRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISV-----PVRVQGL--EQVKLIAVG 188
V ++ G H+ VLT+ G V+T+G G + S+ P RV L +V IA G
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAG-SCGQLGHDSMNDEVNPRRVLELMGSEVSQIACG 302
Query: 189 AFHNLA-LQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQG 228
H LA + G ++A+G GQLGTG T P PV+G
Sbjct: 303 RHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKG 343
>UNIPROTKB|E1C514 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:SPAVDFR EMBL:AADN02016126
EMBL:AADN02016127 EMBL:AADN02016128 EMBL:AADN02016129
IPI:IPI00576498 Ensembl:ENSGALT00000016877 ArrayExpress:E1C514
Uniprot:E1C514
Length = 1050
Score = 382 (139.5 bits), Expect = 3.9e-34, P = 3.9e-34
Identities = 105/312 (33%), Positives = 151/312 (48%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P + + + + A GG H + + + G Y G N GQ G E E
Sbjct: 25 PQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHESEGSKPAW------- 77
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI------KQISVPVRVQG 178
A + IV VA G +HSV L+ +G V++WG G + ++VP ++
Sbjct: 78 --VGTLAGQHIVH-VACGESHSVALSDQGQVFSWGAG-SDGQLGLTTIEDAVTVPRLIKK 133
Query: 179 LEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQP-RSQPIPVQGLSGLTLV 235
L Q ++ + G +H LAL DG + WG N YGQLG G P ++ P V+ L G+ L
Sbjct: 134 LNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLA 193
Query: 236 DIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDN-DKSSKMVPQKVNLLAGEDIVQVSCG 294
+AAGG HS AL+ G V+GWG+ G+LG D D+ S P V LL + +V +SCG
Sbjct: 194 QVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRES---PCHVKLLRSQKVVYISCG 250
Query: 295 GTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKL 354
H+ LT+ G +F+FG G G+LG+ M +N PR + +
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGH-------DSMNDEVN---PRRVLELMGSE--VSQ 298
Query: 355 VACGGRHTLAIV 366
+ACG HTLA V
Sbjct: 299 IACGRHHTLAFV 310
Score = 362 (132.5 bits), Expect = 5.4e-32, P = 5.4e-32
Identities = 106/353 (30%), Positives = 168/353 (47%)
Query: 7 IIAWGSGEDGQLGIGNNEER--EWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKTENI 64
++ WG GQ GIG+N + V + V+ V G +S+ + +DG+ T +
Sbjct: 1 MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 65 --------------PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEP 110
P+ V L+ IV A G H +A+ DQG+ ++WG GQ G
Sbjct: 61 NTKGQLGHESEGSKPAWVGTLAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTT 120
Query: 111 -ERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI-- 167
E R++++ + Q+ + Q++ G H + L +G +TWGQ G +
Sbjct: 121 IEDAVTVPRLIKK---LNQQT-----ILQISCGNWHCLALAADGQFFTWGQN-SYGQLGL 171
Query: 168 -KQI---SVPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS 221
K+ + P RV+ L+ + L +A G H+ AL GA++ WG N GQLG D + R
Sbjct: 172 GKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231
Query: 222 QPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGD-NDKSSKMVPQKV 280
P V+ L +V I+ G H+ LT G V+ +G G G+LG ND+ + P++V
Sbjct: 232 SPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN---PRRV 288
Query: 281 NLLAGEDIVQVSCGGTHSVALT-RDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
L G ++ Q++CG H++A G I++FG G G+LG G P V
Sbjct: 289 LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPV 341
Score = 302 (111.4 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 79/246 (32%), Positives = 124/246 (50%)
Query: 98 WGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLI----VRQVAAGGTHSVVLTREG 153
WG + +GQ G G L+ ++IP+ I V++VA GG HSV L +G
Sbjct: 4 WGYSSFGQPG--------IGSNLQ--VIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDG 53
Query: 154 HVWTWG--QPWPPGDIKQISVPVRVQGL--EQVKLIAVGAFHNLALQEDGALWAWGNNEY 209
V+T G G + S P V L + + +A G H++AL + G +++WG
Sbjct: 54 EVYTCGLNTKGQLGHESEGSKPAWVGTLAGQHIVHVACGESHSVALSDQGQVFSWGAGSD 113
Query: 210 GQLGTGDTQPR-SQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGD 268
GQLG + + P ++ L+ T++ I+ G WH AL DG+ + WG+ +G+LG G
Sbjct: 114 GQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLG- 172
Query: 269 NDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQ 328
+ S+ PQ+V L G + QV+ GG HS AL+ G +F +G+ G+LG +
Sbjct: 173 KECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRES 232
Query: 329 PMEVPI 334
P V +
Sbjct: 233 PCHVKL 238
Score = 176 (67.0 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 66/221 (29%), Positives = 98/221 (44%)
Query: 17 QLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKT-KTENIPSQVNALSNTK 75
Q+ GN W C+ A + +NS GK ++ P +V +L
Sbjct: 141 QISCGN-----WHCLALAADG----QFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIP 191
Query: 76 IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLI 135
+ Q A GG H A+ G + WG N GQ G ER ++ ++ ++ Q+
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVK--LLRSQK------ 243
Query: 136 VRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISV-----PVRVQGL--EQVKLIAVG 188
V ++ G H+ VLT+ G V+T+G G + S+ P RV L +V IA G
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAG-SCGQLGHDSMNDEVNPRRVLELMGSEVSQIACG 302
Query: 189 AFHNLA-LQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQG 228
H LA + G ++A+G GQLGTG T P PV+G
Sbjct: 303 RHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKG 343
>UNIPROTKB|F1PBB3 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:HIFAGTY EMBL:AAEX03016752
EMBL:AAEX03016750 EMBL:AAEX03016751 Ensembl:ENSCAFT00000015531
Uniprot:F1PBB3
Length = 1018
Score = 381 (139.2 bits), Expect = 4.7e-34, P = 4.7e-34
Identities = 97/305 (31%), Positives = 155/305 (50%)
Query: 71 LSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRC 130
L ++ QAA G H L + G+ ++ G N GQ G+ R L+ I R
Sbjct: 20 LGGVELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQ---RGAPCSAQLKERI----RA 72
Query: 131 APKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQIS-VPVRVQGLEQVKL- 184
L V V+ G HS+ + +G V+ WG G+ K+ + +P++++ L +K+
Sbjct: 73 LETLHVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIK 132
Query: 185 -IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQP-RSQPIPVQGLSGLTLVDIAAGGW 242
++ G +H+LAL E G +++WG+N GQLG G P ++ P V+ L G+ L +AAGG
Sbjct: 133 QVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGA 192
Query: 243 HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMV-PQKVNLLAGEDIVQVSCGGTHSVAL 301
HS AL+ G +GWGR G+L N+ S + P ++ L ++ +SCG H+V L
Sbjct: 193 HSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYEHTVVL 252
Query: 302 TRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRH 361
T++G +F+FG +G+LG+ P V +G+D + + CG H
Sbjct: 253 TQNGKVFTFGDNTYGQLGHSPTAEKSGPQLV-----------EGIDG--LVSQIDCGSYH 299
Query: 362 TLAIV 366
TLA V
Sbjct: 300 TLAYV 304
Score = 313 (115.2 bits), Expect = 8.9e-27, P = 8.9e-27
Identities = 78/241 (32%), Positives = 126/241 (52%)
Query: 136 VRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPV------RVQGLE--QVKLIAV 187
+RQ A+G HS++L G V + G G + Q P R++ LE V L++
Sbjct: 25 LRQAASGERHSLLLLSNGQVHSCGDNGR-GQLGQRGAPCSAQLKERIRALETLHVDLVSC 83
Query: 188 GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ-PIPVQGLSGLTLVDIAAGGWHSTA 246
G H+LA+ G ++AWG GQLGTG+ + + P+ ++ L+ + + ++ G +HS A
Sbjct: 84 GKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYHSLA 143
Query: 247 LTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGH 306
L++ G+V+ WG G+LG G S PQ+V L G + QV+ GG HS AL+ G
Sbjct: 144 LSEGGQVFSWGSNSDGQLGLGKKFPSQAS-PQRVRSLDGIPLAQVAAGGAHSFALSLSGT 202
Query: 307 IFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIV 366
F +GR + G+L + +GQ + P +I A +N G ++CG HT+ +
Sbjct: 203 SFGWGRNNAGQLALHKNNVSGQSYK-PYSISALKNLG--------VIYISCGYEHTVVLT 253
Query: 367 E 367
+
Sbjct: 254 Q 254
Score = 280 (103.6 bits), Expect = 3.0e-23, P = 3.0e-23
Identities = 92/328 (28%), Positives = 146/328 (44%)
Query: 8 IAWGSGEDG-----QLGIGNNEEREWVCVVK----ALEPYKVRSVVAGSRNSLAICDDGK 58
++WG G G ++G+G E R+ + L +V S R L G
Sbjct: 3 LSWGPGPRGPVSRRRVGLGGVELRQAASGERHSLLLLSNGQVHSCGDNGRGQLG--QRGA 60
Query: 59 TKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGR 118
+ + ++ AL + + G H LAV +GR +AWG GQ G TG
Sbjct: 61 PCSAQLKERIRALETLHVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLG--------TGE 112
Query: 119 ILRRDIVIPQRCAP--KLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI---KQI--- 170
++ IP + + ++QV+ G HS+ L+ G V++WG G + K+
Sbjct: 113 FKETNL-IPMKIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWGSN-SDGQLGLGKKFPSQ 170
Query: 171 SVPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ---PIP 225
+ P RV+ L+ + L +A G H+ AL G + WG N GQL Q P
Sbjct: 171 ASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYS 230
Query: 226 VQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAG 285
+ L L ++ I+ G H+ LT +G+V+ +G +G+LG + K PQ V + G
Sbjct: 231 ISALKNLGVIYISCGYEHTVVLTQNGKVFTFGDNTYGQLGHSPT--AEKSGPQLVEGIDG 288
Query: 286 EDIVQVSCGGTHSVALT-RDGHIFSFGR 312
+ Q+ CG H++A G + SFGR
Sbjct: 289 L-VSQIDCGSYHTLAYVYTTGKVVSFGR 315
Score = 249 (92.7 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 72/212 (33%), Positives = 111/212 (52%)
Query: 157 TWGQPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGD 216
+WG P P G + + V + G+E ++ A G H+L L +G + + G+N GQLG
Sbjct: 4 SWG-PGPRGPVSRRRVGLG--GVE-LRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRG 59
Query: 217 TQPRSQPIP--VQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSK 274
P S + ++ L L + ++ G HS A+ G V+ WG G G+LG G+ K +
Sbjct: 60 A-PCSAQLKERIRALETLHVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEF-KETN 117
Query: 275 MVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTT-GQPMEVP 333
++P K+ L I QVSCG HS+AL+ G +FS+G G+LG G+K + P V
Sbjct: 118 LIPMKIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRV- 176
Query: 334 INIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
R+ DG+ +A+ VA GG H+ A+
Sbjct: 177 ------RSL-DGIP---LAQ-VAAGGAHSFAL 197
Score = 151 (58.2 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 45/141 (31%), Positives = 71/141 (50%)
Query: 228 GLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGED 287
GL G+ L A+G HS L +G+V+ G G+LG S+++ +++ L
Sbjct: 19 GLGGVELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQL-KERIRALETLH 77
Query: 288 IVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGR-KVTTGQPMEVPINIPAPRNAGDGV 346
+ VSCG HS+A+ G +F++G G G+LG G K T PM++ + D +
Sbjct: 78 VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKI-------KTLND-I 129
Query: 347 DRRWIAKLVACGGRHTLAIVE 367
K V+CG H+LA+ E
Sbjct: 130 K----IKQVSCGHYHSLALSE 146
>UNIPROTKB|F1LPM8 [details] [associations]
symbol:Herc6 "Protein Herc6" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
EMBL:AC126722 IPI:IPI00553869 Ensembl:ENSRNOT00000058626
ArrayExpress:F1LPM8 Uniprot:F1LPM8
Length = 1036
Score = 380 (138.8 bits), Expect = 6.2e-34, P = 6.2e-34
Identities = 98/312 (31%), Positives = 155/312 (49%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P ++ A + K+++AA G H L + R Y+ G N GQ G++ + T R
Sbjct: 19 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQS--TKRPEE--- 73
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPP----GDIKQIS-VPVRVQGL 179
P + + + V+ G HSV + +G V+TWG G+ K+IS +P ++ L
Sbjct: 74 --PIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSL 131
Query: 180 EQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQ-PRSQPIPVQGLSGLTLVD 236
+K+I V G +H+LAL EDG +++WG+N GQLG G+ ++ P V+ L G+ L
Sbjct: 132 AGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQ 191
Query: 237 IAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMV--PQKVNLLAGEDIVQVSCG 294
+AAGG HS AL+ G +GWG G+L N ++ + P + L ++V +SCG
Sbjct: 192 VAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKAEQIYKPHSIGALKTLNVVYISCG 251
Query: 295 GTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKL 354
H+ LT DG +F+FG +L + + G P + G V +
Sbjct: 252 YEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLI-------EGIGGHVSQ------ 298
Query: 355 VACGGRHTLAIV 366
+ CG HT+A V
Sbjct: 299 IECGSYHTIAYV 310
Score = 296 (109.3 bits), Expect = 6.0e-25, P = 6.0e-25
Identities = 70/238 (29%), Positives = 117/238 (49%)
Query: 138 QVAAGGTHSVVLTREGHVWTWGQ-------PWPPGDIKQISVPVRVQGLEQVKLIAVGAF 190
+ A+G HS++L V++ G P K+ P++ + L++ G
Sbjct: 32 KAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEEPIQALSTVHIDLVSCGKE 91
Query: 191 HNLALQEDGALWAWGNNEYGQLGTGDTQPRS-QPIPVQGLSGLTLVDIAAGGWHSTALTD 249
H++A+ G ++ WG GQLG G+++ S P + L+G+ ++ ++ G +HS AL++
Sbjct: 92 HSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSE 151
Query: 250 DGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFS 309
DG+V+ WG G+LG G+N S+ PQKV L G + QV+ GGTHS AL+ G F
Sbjct: 152 DGQVFSWGSNRQGQLGLGNN-LCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFG 210
Query: 310 FGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
+G G+L + + P +I A + ++CG HT + E
Sbjct: 211 WGNNRSGQLALSGNSAKAEQIYKPHSIGALKTLN--------VVYISCGYEHTSVLTE 260
Score = 284 (105.0 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 75/208 (36%), Positives = 115/208 (55%)
Query: 162 WPPGDIKQISVPVRVQGLEQVKLI--AVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQP 219
W PG +Q P R++ +KL+ A G H+L L + +++ G+N GQLG Q
Sbjct: 12 WAPGR-RQ---PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQS 67
Query: 220 RSQPI-PVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQ 278
+P P+Q LS + + ++ G HS A+ G V+ WG G G+LG G++ + S M P
Sbjct: 68 TKRPEEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFM-PT 126
Query: 279 KVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTT-GQPMEVPINIP 337
K+N LAG I+QVSCG HS+AL+ DG +FS+G G+LG G + + P +V
Sbjct: 127 KINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKV----- 181
Query: 338 APRNAGDGVDRRWIAKLVACGGRHTLAI 365
+ +G+ +A+ VA GG H+ A+
Sbjct: 182 ---KSLEGIP---LAQ-VAAGGTHSFAL 202
Score = 280 (103.6 bits), Expect = 3.1e-23, P = 3.1e-23
Identities = 90/288 (31%), Positives = 135/288 (46%)
Query: 38 YKVRSVVAGSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYA 97
++V S SR L TK P Q ALS I + G H +AV QGR +
Sbjct: 47 HRVYSCGDNSRGQLGQKSPQSTKRPEEPIQ--ALSTVHIDLVSCGKEHSVAVCHQGRVFT 104
Query: 98 WGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWT 157
WG GQ G E K+ I I K+I QV+ G HS+ L+ +G V++
Sbjct: 105 WGAGSEGQLGIG-ESKE----ISFMPTKINSLAGIKII--QVSCGHYHSLALSEDGQVFS 157
Query: 158 WG-----QPWPPGDIKQISVPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYG 210
WG Q ++ + P +V+ LE + L +A G H+ AL G + WGNN G
Sbjct: 158 WGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSG 217
Query: 211 QLG-TGDTQPRSQ---PIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGF 266
QL +G++ Q P + L L +V I+ G H++ LT+DG+V+ +G +L
Sbjct: 218 QLALSGNSAKAEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQH 277
Query: 267 GDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALT-RDGHIFSFGRG 313
+ +S + PQ + + G + Q+ CG H++A G + S GRG
Sbjct: 278 --SPRSGRGGPQLIEGIGGH-VSQIECGSYHTIAYVYTTGQVVSLGRG 322
Score = 169 (64.5 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 49/148 (33%), Positives = 76/148 (51%)
Query: 220 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 279
R QP ++ +GL L+ A+G HS L + VY G G+LG + +S+K +
Sbjct: 16 RRQPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLG-QKSPQSTKRPEEP 74
Query: 280 VNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
+ L+ I VSCG HSVA+ G +F++G G G+LG G + E+ +P
Sbjct: 75 IQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIG------ESKEISF-MPTK 127
Query: 340 RNAGDGVDRRWIAKLVACGGRHTLAIVE 367
N+ G+ I + V+CG H+LA+ E
Sbjct: 128 INSLAGIK---IIQ-VSCGHYHSLALSE 151
>UNIPROTKB|F1RW66 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:FP015981 EMBL:CU915521 RefSeq:XP_003129374.3 UniGene:Ssc.42366
Ensembl:ENSSSCT00000010082 GeneID:100517903 KEGG:ssc:100517903
Uniprot:F1RW66
Length = 1050
Score = 380 (138.8 bits), Expect = 6.4e-34, P = 6.4e-34
Identities = 106/312 (33%), Positives = 156/312 (50%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P +S+ + + A GG H + + + G Y G N GQ G E E G + +
Sbjct: 25 PQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGHERE-----GN--KPEQ 77
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI------KQISVPVRVQG 178
+ A + IV VA G +HS+ L+ G +++WG G + + ++VP +Q
Sbjct: 78 I--GALADEHIVH-VACGESHSLALSDRGQLFSWGAG-SDGQLGLMTTEESVAVPRLIQK 133
Query: 179 LEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQP-RSQPIPVQGLSGLTLV 235
L Q ++ V G +H LAL DG + WG N +GQLG G P ++ P V+ L G+ L
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA 193
Query: 236 DIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDN-DKSSKMVPQKVNLLAGEDIVQVSCG 294
+AAGG HS AL+ G V+GWG G+LG D D+ S P V LL + +V +SCG
Sbjct: 194 QVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRES---PCHVKLLRAQKVVYISCG 250
Query: 295 GTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKL 354
H+ LT+ G +F+FG G G+LG+ M +N PR + +
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGH-------DSMNDEVN---PRRVLELMGSE--VTQ 298
Query: 355 VACGGRHTLAIV 366
+ACG +HTLA V
Sbjct: 299 IACGRQHTLAFV 310
Score = 371 (135.7 bits), Expect = 5.9e-33, P = 5.9e-33
Identities = 110/355 (30%), Positives = 171/355 (48%)
Query: 7 IIAWGSGEDGQLGIGNNEE----REWVCVVKALEPYKVRSVVAGSRNSLAICDDGK---- 58
++ WG GQ GI N + VC + V+ V G +S+ + +DG+
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGF--ISDRSVKEVACGGDHSVFLLEDGEVYTC 58
Query: 59 ---TKTE-------NIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG- 107
TK + N P Q+ AL++ IV A G H LA+ D+G+ ++WG GQ G
Sbjct: 59 GLNTKGQLGHEREGNKPEQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118
Query: 108 EEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI 167
E R++++ + Q+ + QV+ G H + L +G +TWG+ G +
Sbjct: 119 MTTEESVAVPRLIQK---LNQQT-----ILQVSCGNWHCLALAADGQFFTWGKN-SHGQL 169
Query: 168 ---KQI---SVPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQP 219
K+ + P RV+ LE + L +A G H+ AL GA++ WG N GQLG D +
Sbjct: 170 GLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEED 229
Query: 220 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGD-NDKSSKMVPQ 278
R P V+ L +V I+ G H+ LT G V+ +G G G+LG ND+ + P+
Sbjct: 230 RESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN---PR 286
Query: 279 KVNLLAGEDIVQVSCGGTHSVALT-RDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
+V L G ++ Q++CG H++A G I++FG G G+LG G P V
Sbjct: 287 RVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341
Score = 172 (65.6 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 58/175 (33%), Positives = 84/175 (48%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG--EEPERKDDTG-RILR 121
P +V +L + Q A GG H A+ G + WG N GQ G +E +R+ ++LR
Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR 240
Query: 122 RDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISV-----PVRV 176
A K++ ++ G H+ VLT+ G V+T+G G + S+ P RV
Sbjct: 241 ---------AQKVVY--ISCGEEHTAVLTKSGGVFTFGAG-SCGQLGHDSMNDEVNPRRV 288
Query: 177 QGL--EQVKLIAVGAFHNLA-LQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQG 228
L +V IA G H LA + G ++A+G GQLGTG T P PV+G
Sbjct: 289 LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>RGD|1307803 [details] [associations]
symbol:Herc3 "HECT and RLD domain containing E3 ubiquitin
protein ligase 3" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=ISO;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 RGD:1307803
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 EMBL:CH474011 IPI:IPI00568958 UniGene:Rn.203362
Ensembl:ENSRNOT00000009694 UCSC:RGD:1307803 Uniprot:D3ZYI2
Length = 909
Score = 377 (137.8 bits), Expect = 9.9e-34, P = 9.9e-34
Identities = 110/354 (31%), Positives = 175/354 (49%)
Query: 7 IIAWGSGEDGQLGIGNNEE----REWVCVVKALEPYKVRSVVAGSRNSLAICDDGK---- 58
++ WG GQ GI +N + VC + + ++ V G +S+ + +DG+
Sbjct: 1 MLCWGYWSLGQPGISSNLQGIVAEPQVC--RFVSDRSIKEVACGGNHSVFLLEDGEVYTC 58
Query: 59 ---TKTE-------NIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 108
TK + N P Q+ AL++ I+ A G H LA+ D+G+ ++WG GQ G
Sbjct: 59 GVNTKGQLGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118
Query: 109 EPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI- 167
+D+ + R + Q+ + I+ QV+ G H + L +G +TWG+ G +
Sbjct: 119 MTT--EDSVAVPR----LIQKLNQQTIL-QVSCGNWHCLALAADGQFFTWGKN-SHGQLG 170
Query: 168 --KQI---SVPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPR 220
K+ + P RV+ LE + L +A G H+ AL GA++ WG N GQLG D + R
Sbjct: 171 LGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDR 230
Query: 221 SQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGD-NDKSSKMVPQK 279
P V+ L +V I+ G H+ LT G V+ +G G G+LG ND+ + P++
Sbjct: 231 ESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVN---PRR 287
Query: 280 VNLLAGEDIVQVSCGGTHSVALT-RDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
V L G ++ Q++CG H++AL G I++FG G G+LG G P V
Sbjct: 288 VLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPV 341
Score = 376 (137.4 bits), Expect = 1.3e-33, P = 1.3e-33
Identities = 106/312 (33%), Positives = 156/312 (50%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P +S+ I + A GG H + + + G Y G N GQ G E E G + +
Sbjct: 25 PQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHERE-----GN--KPEQ 77
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI------KQISVPVRVQG 178
+ A + I+ VA G +HS+ L+ G +++WG G + ++VP +Q
Sbjct: 78 I--GALADQHIIH-VACGESHSLALSDRGQLFSWGAG-SDGQLGLMTTEDSVAVPRLIQK 133
Query: 179 LEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQP-RSQPIPVQGLSGLTLV 235
L Q ++ V G +H LAL DG + WG N +GQLG G P ++ P V+ L G+ L
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLA 193
Query: 236 DIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDN-DKSSKMVPQKVNLLAGEDIVQVSCG 294
+AAGG HS AL+ G V+GWG G+LG D D+ S P V LL + +V +SCG
Sbjct: 194 QVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES---PCHVKLLRTQKVVYISCG 250
Query: 295 GTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKL 354
H+ LT+ G +F+FG G G+LG+ P V + + G V +
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV-LEL-----MGSEVTQ------ 298
Query: 355 VACGGRHTLAIV 366
+ACG +HTLA+V
Sbjct: 299 IACGRQHTLALV 310
Score = 177 (67.4 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 59/179 (32%), Positives = 84/179 (46%)
Query: 61 TENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG--EEPERKDDTG- 117
++ P +V +L + Q A GG H A+ G + WG N GQ G +E +R+
Sbjct: 177 SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV 236
Query: 118 RILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISV----- 172
++LR V+ ++ G H+ VLT+ G V+T+G G + SV
Sbjct: 237 KLLRTQKVV-----------YISCGEEHTAVLTKSGGVFTFGAG-SCGQLGHDSVNDEVN 284
Query: 173 PVRVQGL--EQVKLIAVGAFHNLAL-QEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQG 228
P RV L +V IA G H LAL G ++A+G GQLGTG T P PV+G
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343
>UNIPROTKB|E2RMB0 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:AAEX03016754 EMBL:AAEX03016753 RefSeq:XP_535653.3
Ensembl:ENSCAFT00000015540 GeneID:478475 KEGG:cfa:478475
Uniprot:E2RMB0
Length = 1050
Score = 378 (138.1 bits), Expect = 1.0e-33, P = 1.0e-33
Identities = 106/312 (33%), Positives = 155/312 (49%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P +S+ + + A GG H + + + G Y G N GQ G E E G + +
Sbjct: 25 PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHERE-----GN--KPEQ 77
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI------KQISVPVRVQG 178
+ A + IV VA G +HS+ L+ G +++WG G + ++VP +Q
Sbjct: 78 I--GALADQHIVH-VACGESHSLALSDRGQLFSWGAG-SDGQLGLMTTEDSVAVPRLIQK 133
Query: 179 LEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQP-RSQPIPVQGLSGLTLV 235
L Q ++ V G +H LAL DG + WG N +GQLG G P ++ P V+ L G+ L
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLA 193
Query: 236 DIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDN-DKSSKMVPQKVNLLAGEDIVQVSCG 294
+AAGG HS AL+ G V+GWG G+LG D D+ S P V LL + +V +SCG
Sbjct: 194 QVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRES---PCHVKLLRTQKVVYISCG 250
Query: 295 GTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKL 354
H+ LT+ G +F+FG G G+LG+ M +N PR + +
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGH-------DSMNDEVN---PRRVLELMGSE--VTQ 298
Query: 355 VACGGRHTLAIV 366
+ACG +HTLA V
Sbjct: 299 IACGRQHTLAFV 310
Score = 371 (135.7 bits), Expect = 5.9e-33, P = 5.9e-33
Identities = 111/354 (31%), Positives = 172/354 (48%)
Query: 7 IIAWGSGEDGQLGIGNNEE----REWVCVVKALEPYKVRSVVAGSRNSLAICDDGK---- 58
++ WG GQ GI N + VC + V+ V G +S+ + +DG+
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGF--ISDRSVKEVACGGNHSVFLLEDGEVYTC 58
Query: 59 ---TKTE-------NIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 108
TK + N P Q+ AL++ IV A G H LA+ D+G+ ++WG GQ G
Sbjct: 59 GLNTKGQLGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118
Query: 109 EPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI- 167
+D+ + R + Q+ + I+ QV+ G H + L +G +TWG+ G +
Sbjct: 119 MTT--EDSVAVPR----LIQKLNQQTIL-QVSCGNWHCLALAADGQFFTWGKN-SHGQLG 170
Query: 168 --KQI---SVPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPR 220
K+ + P RV+ LE + L +A G H+ AL GA++ WG N GQLG D + R
Sbjct: 171 LGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDR 230
Query: 221 SQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGD-NDKSSKMVPQK 279
P V+ L +V I+ G H+ LT G V+ +G G G+LG ND+ + P++
Sbjct: 231 ESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN---PRR 287
Query: 280 VNLLAGEDIVQVSCGGTHSVALT-RDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
V L G ++ Q++CG H++A G I++FG G G+LG G P V
Sbjct: 288 VLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPV 341
Score = 170 (64.9 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 57/175 (32%), Positives = 82/175 (46%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG--EEPERKDDTG-RILR 121
P +V +L + Q A GG H A+ G + WG N GQ G +E +R+ ++LR
Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR 240
Query: 122 RDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISV-----PVRV 176
V+ ++ G H+ VLT+ G V+T+G G + S+ P RV
Sbjct: 241 TQKVV-----------YISCGEEHTAVLTKSGGVFTFGAG-SCGQLGHDSMNDEVNPRRV 288
Query: 177 QGL--EQVKLIAVGAFHNLA-LQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQG 228
L +V IA G H LA + G ++A+G GQLGTG T P PV+G
Sbjct: 289 LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343
>RGD|1561739 [details] [associations]
symbol:Herc6 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 6" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 OrthoDB:EOG4N30N6
IPI:IPI00553869 EMBL:BC085921 UniGene:Rn.107120
ProteinModelPortal:Q5U2P8 PhosphoSite:Q5U2P8 UCSC:RGD:1561739
InParanoid:Q5U2P8 ArrayExpress:Q5U2P8 Genevestigator:Q5U2P8
Uniprot:Q5U2P8
Length = 1034
Score = 377 (137.8 bits), Expect = 1.3e-33, P = 1.3e-33
Identities = 97/311 (31%), Positives = 154/311 (49%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P ++ A + K+++AA G H L + R Y+ G N GQ G++ + R +
Sbjct: 19 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTK-----RPE- 72
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPP----GDIKQIS-VPVRVQGL 179
P + + + V+ G HSV + +G V+TWG G+ K+IS +P ++ L
Sbjct: 73 --PIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSL 130
Query: 180 EQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQ-PRSQPIPVQGLSGLTLVD 236
+K+I V G +H+LAL EDG +++WG+N GQLG G+ ++ P V+ L G+ L
Sbjct: 131 AGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQ 190
Query: 237 IAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMV-PQKVNLLAGEDIVQVSCGG 295
+AAGG HS AL+ G +GWG G+L N ++ P + L ++V +SCG
Sbjct: 191 VAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGY 250
Query: 296 THSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLV 355
H+ LT DG +F+FG +L + + G P + G V + +
Sbjct: 251 EHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLI-------EGIGGHVSQ------I 297
Query: 356 ACGGRHTLAIV 366
CG HT+A V
Sbjct: 298 ECGSYHTIAYV 308
Score = 293 (108.2 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 75/207 (36%), Positives = 115/207 (55%)
Query: 162 WPPGDIKQISVPVRVQGLEQVKLI--AVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQP 219
W PG +Q P R++ +KL+ A G H+L L + +++ G+N GQLG Q
Sbjct: 12 WAPGR-RQ---PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQS 67
Query: 220 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 279
+P P+Q LS + + ++ G HS A+ G V+ WG G G+LG G++ + S M P K
Sbjct: 68 TKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFM-PTK 126
Query: 280 VNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTT-GQPMEVPINIPA 338
+N LAG I+QVSCG HS+AL+ DG +FS+G G+LG G + + P +V
Sbjct: 127 INSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKV------ 180
Query: 339 PRNAGDGVDRRWIAKLVACGGRHTLAI 365
+ +G+ +A+ VA GG H+ A+
Sbjct: 181 --KSLEGIP---LAQ-VAAGGTHSFAL 201
Score = 287 (106.1 bits), Expect = 5.5e-24, P = 5.5e-24
Identities = 75/238 (31%), Positives = 119/238 (50%)
Query: 138 QVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISV-----PVRVQGLEQVK--LIAVGAF 190
+ A+G HS++L V++ G G + Q S P +Q L V L++ G
Sbjct: 32 KAASGERHSLLLFSNHRVYSCGDN-SRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKE 90
Query: 191 HNLALQEDGALWAWGNNEYGQLGTGDTQPRS-QPIPVQGLSGLTLVDIAAGGWHSTALTD 249
H++A+ G ++ WG GQLG G+++ S P + L+G+ ++ ++ G +HS AL++
Sbjct: 91 HSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSE 150
Query: 250 DGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFS 309
DG+V+ WG G+LG G+N S+ PQKV L G + QV+ GGTHS AL+ G F
Sbjct: 151 DGQVFSWGSNRQGQLGLGNN-LCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFG 209
Query: 310 FGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
+G G+L Q + P +I A + ++CG HT + E
Sbjct: 210 WGNNRSGQLALSGNSAKEQIYK-PHSIGALKTLN--------VVYISCGYEHTSVLTE 258
Score = 215 (80.7 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 69/228 (30%), Positives = 110/228 (48%)
Query: 45 AGSRNSLAICDDGKTKTEN-IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 103
AGS L I G++K + +P+++N+L+ KI+Q + G +H LA+ + G+ ++WG N
Sbjct: 106 AGSEGQLGI---GESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQ 162
Query: 104 GQCGEEPERKDDTGRILRRDIVIPQRCAPK--LIVRQVAAGGTHSVVLTREGHVWTWG-- 159
GQ G G L PQ+ + + QVAAGGTHS L+ G + WG
Sbjct: 163 GQLG--------LGNNLCSQ-ASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNN 213
Query: 160 ---QPWPPGDI--KQISVPVRVQGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQL 212
Q G+ +QI P + L+ + ++ + G H L EDG ++ +G + QL
Sbjct: 214 RSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQL 273
Query: 213 GTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALT-DDGEVYGWGRG 259
R P ++G+ G + I G +H+ A G+V GRG
Sbjct: 274 QHSPRSGRGGPQLIEGIGG-HVSQIECGSYHTIAYVYTTGQVVSLGRG 320
Score = 170 (64.9 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 50/148 (33%), Positives = 77/148 (52%)
Query: 220 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 279
R QP ++ +GL L+ A+G HS L + VY G G+LG + +S+K P+
Sbjct: 16 RRQPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLG-QKSPQSTKR-PEP 73
Query: 280 VNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
+ L+ I VSCG HSVA+ G +F++G G G+LG G + E+ +P
Sbjct: 74 IQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIG------ESKEISF-MPTK 126
Query: 340 RNAGDGVDRRWIAKLVACGGRHTLAIVE 367
N+ G+ I + V+CG H+LA+ E
Sbjct: 127 INSLAGIK---IIQ-VSCGHYHSLALSE 150
>UNIPROTKB|A2VDP7 [details] [associations]
symbol:HERC3 "HERC3 protein" species:9913 "Bos taurus"
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 CTD:8916
HOGENOM:HOG000208452 HOVERGEN:HBG050878 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS EMBL:DAAA02017014 EMBL:BC133341 IPI:IPI00710875
RefSeq:NP_001077132.1 UniGene:Bt.85959 Ensembl:ENSBTAT00000013357
GeneID:510924 KEGG:bta:510924 InParanoid:A2VDP7 NextBio:20869685
Uniprot:A2VDP7
Length = 1050
Score = 375 (137.1 bits), Expect = 2.2e-33, P = 2.2e-33
Identities = 105/312 (33%), Positives = 155/312 (49%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P +S+ + + A GG H + + + G Y G N GQ G E E G + +
Sbjct: 25 PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHERE-----GN--KPEQ 77
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI------KQISVPVRVQG 178
+ A + IV VA G +HS+ L+ +G +++WG G + ++VP +Q
Sbjct: 78 I--GALADQHIVH-VACGESHSLALSDQGQLFSWGAG-SDGQLGLMTIEDSVAVPRLIQK 133
Query: 179 LEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQP-RSQPIPVQGLSGLTLV 235
L Q ++ V G +H LAL DG + WG N +GQLG G P ++ P V+ L G+ L
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLA 193
Query: 236 DIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDN-DKSSKMVPQKVNLLAGEDIVQVSCG 294
+ AGG HS AL+ G V+GWG G+LG D D+ S P V LL + +V +SCG
Sbjct: 194 QVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES---PCHVKLLRTQKVVYISCG 250
Query: 295 GTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKL 354
H+ LT+ G +F+FG G G+LG+ M +N PR + +
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGH-------DSMNDEVN---PRRVLELMGSE--VTQ 298
Query: 355 VACGGRHTLAIV 366
+ACG +HTLA V
Sbjct: 299 IACGRQHTLAFV 310
Score = 368 (134.6 bits), Expect = 1.2e-32, P = 1.2e-32
Identities = 111/354 (31%), Positives = 171/354 (48%)
Query: 7 IIAWGSGEDGQLGIGNNEE----REWVCVVKALEPYKVRSVVAGSRNSLAICDDGK---- 58
++ WG GQ GI N + VC + V+ V G +S+ + +DG+
Sbjct: 1 MLCWGYWSLGQPGISPNLQGIVAEPQVCGF--ISDRSVKEVACGGNHSVFLLEDGEVYTC 58
Query: 59 ---TKTE-------NIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 108
TK + N P Q+ AL++ IV A G H LA+ DQG+ ++WG GQ G
Sbjct: 59 GVNTKGQLGHEREGNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGL 118
Query: 109 EPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI- 167
+D+ + R + Q+ + I+ QV+ G H + L +G +TWG+ G +
Sbjct: 119 MTI--EDSVAVPR----LIQKLNQQTIL-QVSCGNWHCLALAADGQFFTWGRN-SHGQLG 170
Query: 168 --KQI---SVPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPR 220
K+ + P RV+ LE + L + G H+ AL GA++ WG N GQLG D + R
Sbjct: 171 LGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDR 230
Query: 221 SQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGD-NDKSSKMVPQK 279
P V+ L +V I+ G H+ LT G V+ +G G G+LG ND+ + P++
Sbjct: 231 ESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN---PRR 287
Query: 280 VNLLAGEDIVQVSCGGTHSVALT-RDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
V L G ++ Q++CG H++A G I++FG G G+LG G P V
Sbjct: 288 VLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341
Score = 322 (118.4 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 82/245 (33%), Positives = 122/245 (49%)
Query: 98 WGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCA--PKLIVRQVAAGGTHSVVLTREGHV 155
WG GQ G P L+ + PQ C V++VA GG HSV L +G V
Sbjct: 4 WGYWSLGQPGISPN--------LQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEV 55
Query: 156 WTWG--QPWPPGDIKQISVPVRVQGL--EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQ 211
+T G G ++ + P ++ L + + +A G H+LAL + G L++WG GQ
Sbjct: 56 YTCGVNTKGQLGHEREGNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQ 115
Query: 212 LGTGDTQPRSQPIP--VQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDN 269
LG + S +P +Q L+ T++ ++ G WH AL DG+ + WGR HG+LG G
Sbjct: 116 LGLMTIED-SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLG-K 173
Query: 270 DKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQP 329
+ S+ PQ+V L G + QV GG HS AL+ G +F +G + G+LG + P
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP 233
Query: 330 MEVPI 334
V +
Sbjct: 234 CHVKL 238
Score = 168 (64.2 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 61/193 (31%), Positives = 88/193 (45%)
Query: 48 RNSLAICDDGKT-KTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQC 106
RNS GK ++ P +V +L + Q GG H A+ G + WG N GQ
Sbjct: 163 RNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQL 222
Query: 107 G--EEPERKDDTG-RILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWP 163
G +E +R+ ++LR V+ ++ G H+ VLT+ G V+T+G
Sbjct: 223 GLSDEKDRESPCHVKLLRTQKVV-----------YISCGEEHTAVLTKSGGVFTFGAG-S 270
Query: 164 PGDIKQISV-----PVRVQGL--EQVKLIAVGAFHNLA-LQEDGALWAWGNNEYGQLGTG 215
G + S+ P RV L +V IA G H LA + G ++A+G GQLGTG
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330
Query: 216 DTQPRSQPIPVQG 228
T P PV+G
Sbjct: 331 HTCNVKCPSPVKG 343
>UNIPROTKB|Q15034 [details] [associations]
symbol:HERC3 "Probable E3 ubiquitin-protein ligase HERC3"
species:9606 "Homo sapiens" [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016023 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:CH471057 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:D25215 EMBL:AK289990
IPI:IPI00014216 RefSeq:NP_001258531.1 RefSeq:NP_055421.1
UniGene:Hs.35804 ProteinModelPortal:Q15034 SMR:Q15034 IntAct:Q15034
MINT:MINT-158126 STRING:Q15034 PhosphoSite:Q15034 DMDM:2495699
PaxDb:Q15034 PRIDE:Q15034 DNASU:8916 Ensembl:ENST00000264345
Ensembl:ENST00000402738 GeneID:8916 KEGG:hsa:8916 UCSC:uc003hrw.1
CTD:8916 GeneCards:GC04P089444 HGNC:HGNC:4876 HPA:HPA039170
MIM:605200 neXtProt:NX_Q15034 PharmGKB:PA29251 HOGENOM:HOG000208452
HOVERGEN:HBG050878 InParanoid:Q15034 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS PhylomeDB:Q15034 ChiTaRS:HERC3 GenomeRNAi:8916
NextBio:33540 ArrayExpress:Q15034 Bgee:Q15034 CleanEx:HS_HERC3
Genevestigator:Q15034 Uniprot:Q15034
Length = 1050
Score = 375 (137.1 bits), Expect = 2.2e-33, P = 2.2e-33
Identities = 105/312 (33%), Positives = 155/312 (49%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P +S+ + + A GG H + + + G Y G N GQ G E E G + +
Sbjct: 25 PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHERE-----GN--KPEQ 77
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI------KQISVPVRVQG 178
+ A + I+ VA G +HS+ L+ G +++WG G + ++VP +Q
Sbjct: 78 I--GALADQHIIH-VACGESHSLALSDRGQLFSWGAG-SDGQLGLMTTEDSVAVPRLIQK 133
Query: 179 LEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQP-RSQPIPVQGLSGLTLV 235
L Q ++ V G +H LAL DG + WG N +GQLG G P ++ P V+ L G+ L
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA 193
Query: 236 DIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDN-DKSSKMVPQKVNLLAGEDIVQVSCG 294
+AAGG HS AL+ G V+GWG G+LG D D+ S P V LL + +V +SCG
Sbjct: 194 QVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES---PCHVKLLRTQKVVYISCG 250
Query: 295 GTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKL 354
H+ LT+ G +F+FG G G+LG+ M +N PR + +
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGH-------DSMNDEVN---PRRVLELMGSE--VTQ 298
Query: 355 VACGGRHTLAIV 366
+ACG +HTLA V
Sbjct: 299 IACGRQHTLAFV 310
Score = 371 (135.7 bits), Expect = 5.9e-33, P = 5.9e-33
Identities = 110/354 (31%), Positives = 172/354 (48%)
Query: 7 IIAWGSGEDGQLGIGNNEE----REWVCVVKALEPYKVRSVVAGSRNSLAICDDGK---- 58
++ WG GQ GI N + VC + V+ V G +S+ + +DG+
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGF--ISDRSVKEVACGGNHSVFLLEDGEVYTC 58
Query: 59 ---TKTE-------NIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 108
TK + N P Q+ AL++ I+ A G H LA+ D+G+ ++WG GQ G
Sbjct: 59 GLNTKGQLGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118
Query: 109 EPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI- 167
+D+ + R + Q+ + I+ QV+ G H + L +G +TWG+ G +
Sbjct: 119 MTT--EDSVAVPR----LIQKLNQQTIL-QVSCGNWHCLALAADGQFFTWGKN-SHGQLG 170
Query: 168 --KQI---SVPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPR 220
K+ + P RV+ LE + L +A G H+ AL GA++ WG N GQLG D + R
Sbjct: 171 LGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDR 230
Query: 221 SQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGD-NDKSSKMVPQK 279
P V+ L +V I+ G H+ LT G V+ +G G G+LG ND+ + P++
Sbjct: 231 ESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN---PRR 287
Query: 280 VNLLAGEDIVQVSCGGTHSVALT-RDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
V L G ++ Q++CG H++A G I++FG G G+LG G P V
Sbjct: 288 VLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341
Score = 170 (64.9 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 57/175 (32%), Positives = 82/175 (46%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG--EEPERKDDTG-RILR 121
P +V +L + Q A GG H A+ G + WG N GQ G +E +R+ ++LR
Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR 240
Query: 122 RDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISV-----PVRV 176
V+ ++ G H+ VLT+ G V+T+G G + S+ P RV
Sbjct: 241 TQKVV-----------YISCGEEHTAVLTKSGGVFTFGAG-SCGQLGHDSMNDEVNPRRV 288
Query: 177 QGL--EQVKLIAVGAFHNLA-LQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQG 228
L +V IA G H LA + G ++A+G GQLGTG T P PV+G
Sbjct: 289 LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>FB|FBgn0035207 [details] [associations]
symbol:CG9153 species:7227 "Drosophila melanogaster"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HSSP:Q05086 EMBL:AY128479 ProteinModelPortal:Q8MQN4
SMR:Q8MQN4 PaxDb:Q8MQN4 PRIDE:Q8MQN4 FlyBase:FBgn0035207
InParanoid:Q8MQN4 OrthoDB:EOG4WDBSR ChiTaRS:CG9153
ArrayExpress:Q8MQN4 Bgee:Q8MQN4 Uniprot:Q8MQN4
Length = 1058
Score = 374 (136.7 bits), Expect = 2.8e-33, P = 2.8e-33
Identities = 108/322 (33%), Positives = 161/322 (50%)
Query: 57 GKTKTENI--PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKD 114
G + E I PSQ+ +T + Q A G H L + G+ YA G N+Y Q G + K
Sbjct: 21 GGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTK- 79
Query: 115 DTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG-----QPWPPGDIKQ 169
R ++IP+ ++ Q+ G HS+ L+ G V +WG Q D +
Sbjct: 80 -------RPLLIPE--LQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEI 130
Query: 170 ISVPVRVQGL--EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTG---DTQPRSQPI 224
+ +P V+ L + V IA G H+LAL G L++WG+N YGQLG D + P+
Sbjct: 131 VQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPL 190
Query: 225 PVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLA 284
+ L G+ L IA GG HS ++ G V+GWGR G+LG ND++++ P ++ L
Sbjct: 191 RLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGL--NDETNRSYPTQLKTLR 248
Query: 285 GEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGD 344
+ V+CG SV LT +G +F+ G G +G+LG+G P V + + G
Sbjct: 249 TLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV-MEL-----MGS 302
Query: 345 GVDRRWIAKLVACGGRHTLAIV 366
+ + VACG RHTLA+V
Sbjct: 303 TITQ------VACGNRHTLALV 318
Score = 366 (133.9 bits), Expect = 2.0e-32, P = 2.0e-32
Identities = 95/284 (33%), Positives = 147/284 (51%)
Query: 46 GSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQ 105
GS + + D TK P + L + I+Q G H LA+ D G+ +WG N+ GQ
Sbjct: 65 GSNDYSQLGHDLPTKR---PLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQ 121
Query: 106 CGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPW--- 162
G +++ I++ V+ Q K +V Q+A G HS+ LT G +++WG
Sbjct: 122 LGHATDKE-----IVQLPKVVRQ-LVTKTVV-QIACGNNHSLALTSCGELYSWGSNIYGQ 174
Query: 163 ----PPGDIKQISVPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGD 216
P D+ + P+R+ L + L IA G H+ + + GA++ WG N GQLG D
Sbjct: 175 LGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLND 234
Query: 217 TQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMV 276
RS P ++ L L + +A G S LT++G V+ G G +G+LG G + S++M+
Sbjct: 235 ETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFS--SNEML 292
Query: 277 PQKVNLLAGEDIVQVSCGGTHSVALTRD-GHIFSFGRGDHGRLG 319
P+ V L G I QV+CG H++AL G +++FG G G+LG
Sbjct: 293 PRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLG 336
Score = 307 (113.1 bits), Expect = 4.2e-26, P = 4.2e-26
Identities = 79/245 (32%), Positives = 121/245 (49%)
Query: 96 YAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRC--APKLIVRQVAAGGTHSVVLTREG 153
Y WG +GQ G G I I+ P + P V+QVA G H++ LT G
Sbjct: 8 YCWGSTSHGQLG--------LGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATG 59
Query: 154 HVWTWGQ-PWPP-GDIKQISVPVRVQGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEY 209
V+ G + G P+ + L+ +I + G+ H+LAL + G + +WG+N+
Sbjct: 60 KVYACGSNDYSQLGHDLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDC 119
Query: 210 GQLGTG-DTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGD 268
GQLG D + P V+ L T+V IA G HS ALT GE+Y WG +G+LG
Sbjct: 120 GQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNS 179
Query: 269 -NDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTG 327
ND + P ++ L G + ++CGG HS +++ G +F +GR + G+LG +
Sbjct: 180 PNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRS 239
Query: 328 QPMEV 332
P ++
Sbjct: 240 YPTQL 244
Score = 213 (80.0 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 86/330 (26%), Positives = 140/330 (42%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCV--VKALEPYKVRSVVAGSRNSLAICDDGK 58
MAS + WGS GQLG+G E+ + + + V+ V G R++L + GK
Sbjct: 1 MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGK 60
Query: 59 TKT----------ENIPSQ----VNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYG 104
++P++ + L + I+Q G H LA+ D G+ +WG N+ G
Sbjct: 61 VYACGSNDYSQLGHDLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCG 120
Query: 105 QCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPW-- 162
Q G +++ I++ V+ Q K +V Q+A G HS+ LT G +++WG
Sbjct: 121 QLGHATDKE-----IVQLPKVVRQ-LVTKTVV-QIACGNNHSLALTSCGELYSWGSNIYG 173
Query: 163 -----PPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDT 217
P D+ + P+R+ L + L A+ N + + +G G
Sbjct: 174 QLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLN 233
Query: 218 QPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGE-----HGRLG-FGDNDK 271
++ P Q + TL G A D+ V+ G G G G
Sbjct: 234 DETNRSYPTQLKTLRTL------GVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFS 287
Query: 272 SSKMVPQKVNLLAGEDIVQVSCGGTHSVAL 301
S++M+P+ V L G I QV+CG H++AL
Sbjct: 288 SNEMLPRMVMELMGSTITQVACGNRHTLAL 317
Score = 152 (58.6 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 33/117 (28%), Positives = 59/117 (50%)
Query: 252 EVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFG 311
E+Y WG HG+LG G + + P ++ + QV+CG H++ LT G +++ G
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65
Query: 312 RGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVEW 368
D+ +LG+ P + P+ IP ++ ++ + CG RH+LA+ +W
Sbjct: 66 SNDYSQLGHDL------PTKRPLLIPELQD--------YVIIQICCGSRHSLALSDW 108
Score = 145 (56.1 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 63/219 (28%), Positives = 84/219 (38%)
Query: 17 QLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKTENIPSQVNALSNTKI 76
Q+ GNN + + E Y S + G L + N P ++ L +
Sbjct: 147 QIACGNNHS---LALTSCGELYSWGSNIYGQ---LGVNSPNDLTHCNYPLRLTTLLGIPL 200
Query: 77 VQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIV 136
A GG H + G + WG N GQ G D+T R + + L V
Sbjct: 201 AAIACGGNHSFLISKSGAVFGWGRNNCGQLG----LNDETNRSYPTQL----KTLRTLGV 252
Query: 137 RQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGL--EQVKLIAVGAF 190
R VA G SV LT EG V+T G G +P V L + +A G
Sbjct: 253 RFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNR 312
Query: 191 HNLALQED-GALWAWGNNEYGQLGTGDTQPRSQPIPVQG 228
H LAL G ++A+G GQLGT T+ P V G
Sbjct: 313 HTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIG 351
Score = 40 (19.1 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 229 LSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHG 262
LS + L+ + W+ + L D +G +HG
Sbjct: 433 LSSIELIFRSQACWNGSFLLDHDRHFGCSVRDHG 466
>TAIR|locus:2076532 [details] [associations]
symbol:AT3G02300 "AT3G02300" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008536
"Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 IPI:IPI00534317
RefSeq:NP_186879.2 UniGene:At.41157 ProteinModelPortal:F4J609
SMR:F4J609 EnsemblPlants:AT3G02300.1 GeneID:821167
KEGG:ath:AT3G02300 OMA:LKELCEF Uniprot:F4J609
Length = 471
Score = 324 (119.1 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 95/311 (30%), Positives = 150/311 (48%)
Query: 72 SNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPE--RKDDTG-RILRRDIVIPQ 128
+N++ + + G H AV G +AWG NEYGQ G+ E RK + L+ + V
Sbjct: 59 ANSRWLDISCGREHTAAVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFV 118
Query: 129 RCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEQVKLIAVG 188
C +A + L+ +W WGQ ++ ++ ++ ++ G
Sbjct: 119 SCGA-FCTAAIAEPRENDGTLSTS-RLWVWGQN-QGSNLPRLFSGA-FPATTAIRQVSCG 174
Query: 189 AFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ-PIPVQGLSG--------LTLVDIAA 239
H +AL E+G L AWG NE GQLG G T Q P + + + ++ ++
Sbjct: 175 TAHVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSC 234
Query: 240 GGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSK-MVPQKVNLLAGEDIVQVSCGGTHS 298
G +H+ AL+D GEVY WG G G+LG K ++P++V L G + +V+CGG H+
Sbjct: 235 GEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVACGGVHT 294
Query: 299 VALTRDGHIFSFGRGDHGRLGYGRK------VTTGQPMEVPINIPAPRNAGDGVDRRWIA 352
AL+ +G ++++G G G+LG G + V+ G M + N+P D
Sbjct: 295 CALSLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLR-NVPVLVIPTD-------V 346
Query: 353 KLVACGGRHTL 363
+LVACG HTL
Sbjct: 347 RLVACGHSHTL 357
Score = 229 (85.7 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 86/309 (27%), Positives = 138/309 (44%)
Query: 87 LAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQR---CAPKLIVR--QVAA 141
+++ + Y WG N+ GQ G + K +LR +P C R ++
Sbjct: 14 VSIPTKSAIYVWGYNQSGQTGRNEQEK-----LLRIPKQLPPELFGCPAGANSRWLDISC 68
Query: 142 GGTHSVVLTREGHVWTWG--QPWPPGDIKQISV--PVRVQGLEQ--VKLIAVGAFHNLAL 195
G H+ + +G ++ WG + GD ++ P +V+ L+ VK ++ GAF A+
Sbjct: 69 GREHTAAVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGAFCTAAI 128
Query: 196 QE----DGAL-----WAWGNNEYGQLGTGDTQPR--SQPIPVQGLSGLTLVDIAAGGWHS 244
E DG L W WG N+ G PR S P + ++ G H
Sbjct: 129 AEPRENDGTLSTSRLWVWGQNQ------GSNLPRLFSGAFPAT----TAIRQVSCGTAHV 178
Query: 245 TALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLA---GE-----DIVQVSCGGT 296
AL+++G + WG E G+LG G + + P+ +N A E I+Q+SCG
Sbjct: 179 VALSEEGLLQAWGYNEQGQLGRGVTCEGLQ-APRVINAYAKFLDEAPELVKIMQLSCGEY 237
Query: 297 HSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVA 356
H+ AL+ G ++++G G G+LG+ + +G +P + DGV K VA
Sbjct: 238 HTAALSDAGEVYTWGLGSMGQLGHV-SLQSGDKELIPRRVVGL----DGVSM----KEVA 288
Query: 357 CGGRHTLAI 365
CGG HT A+
Sbjct: 289 CGGVHTCAL 297
Score = 209 (78.6 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 50/151 (33%), Positives = 82/151 (54%)
Query: 180 EQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQP-IP--VQGLSGLTL 234
E VK+ ++ G +H AL + G ++ WG GQLG Q + IP V GL G+++
Sbjct: 225 ELVKIMQLSCGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSM 284
Query: 235 VDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDND-------KSSKMVPQKVNLLA-GE 286
++A GG H+ AL+ +G +Y WG G+ G+LG G S+M+ + V +L
Sbjct: 285 KEVACGGVHTCALSLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVIPT 344
Query: 287 DIVQVSCGGTHSVALTRDGHIFSFGRGDHGR 317
D+ V+CG +H++ R+G I +G +G+
Sbjct: 345 DVRLVACGHSHTLVYMREGRICGWGYNSYGQ 375
Score = 198 (74.8 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 60/192 (31%), Positives = 86/192 (44%)
Query: 75 KIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKL 134
KI+Q + G +H A+ D G Y WG GQ G + D I RR + + +
Sbjct: 228 KIMQLSCGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDG-----V 282
Query: 135 IVRQVAAGGTHSVVLTREGHVWTWG--QPWPPG---------------DIKQISVPVRVQ 177
+++VA GG H+ L+ EG ++ WG Q G ++ +VPV V
Sbjct: 283 SMKEVACGGVHTCALSLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVI 342
Query: 178 GLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDI 237
+ V+L+A G H L +G + WG N YGQ + P PV G + +
Sbjct: 343 PTD-VRLVACGHSHTLVYMREGRICGWGYNSYGQAANEKSSYAWYPSPVDWCVG-QVRKL 400
Query: 238 AAGGWHSTALTD 249
AAGG HS LTD
Sbjct: 401 AAGGGHSAVLTD 412
Score = 185 (70.2 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 57/189 (30%), Positives = 90/189 (47%)
Query: 136 VRQVAAGGTHSVVLTREGHVWTWGQ---------PWPPGDIKQISVPVRVQGLEQVKL-- 184
+ Q++ G H+ L+ G V+TWG GD K++ +P RV GL+ V +
Sbjct: 229 IMQLSCGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGD-KEL-IPRRVVGLDGVSMKE 286
Query: 185 IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQ------PRSQPIPVQGLSGLTL-VDI 237
+A G H AL +GAL+AWG + GQLG G + ++ + L + D+
Sbjct: 287 VACGGVHTCALSLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVIPTDV 346
Query: 238 ---AAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSS-KMVPQKVNLLAGEDIVQVSC 293
A G H+ +G + GWG +G+ N+KSS P V+ G+ + +++
Sbjct: 347 RLVACGHSHTLVYMREGRICGWGYNSYGQAA---NEKSSYAWYPSPVDWCVGQ-VRKLAA 402
Query: 294 GGTHSVALT 302
GG HS LT
Sbjct: 403 GGGHSAVLT 411
Score = 156 (60.0 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 50/184 (27%), Positives = 82/184 (44%)
Query: 192 NLALQEDGALWAWGNNEYGQLGTGDTQ-----PRSQPIPVQGL-SGLTL--VDIAAGGWH 243
++++ A++ WG N+ GQ G + + P+ P + G +G +DI+ G H
Sbjct: 13 SVSIPTKSAIYVWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGANSRWLDISCGREH 72
Query: 244 STALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTR 303
+ A+ DG ++ WG E+G+LG D + + P+KV L E + VSCG + A+
Sbjct: 73 TAAVASDGSLFAWGANEYGQLG--DGTEVGRKHPKKVKQLQSEFVKFVSCGAFCTAAIAE 130
Query: 304 DGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTL 363
R + G L R GQ N+P R + V+CG H +
Sbjct: 131 P-------RENDGTLSTSRLWVWGQNQGS--NLP--RLFSGAFPATTAIRQVSCGTAHVV 179
Query: 364 AIVE 367
A+ E
Sbjct: 180 ALSE 183
Score = 137 (53.3 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 36/103 (34%), Positives = 51/103 (49%)
Query: 62 ENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERK-----DDT 116
E IP +V L + + A GG H A+ +G YAWGG + GQ G P+ +
Sbjct: 270 ELIPRRVVGLDGVSMKEVACGGVHTCALSLEGALYAWGGGQAGQLGLGPQSGFFFSVSNG 329
Query: 117 GRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG 159
+L R++ P P VR VA G +H++V REG + WG
Sbjct: 330 SEMLLRNV--PVLVIPT-DVRLVACGHSHTLVYMREGRICGWG 369
Score = 80 (33.2 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 24/68 (35%), Positives = 34/68 (50%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICD----D 56
+AS S+ AWG+ E GQLG G R+ VK L+ V+ V G+ + AI + D
Sbjct: 76 VASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGAFCTAAIAEPREND 135
Query: 57 GKTKTENI 64
G T +
Sbjct: 136 GTLSTSRL 143
Score = 54 (24.1 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 16/62 (25%), Positives = 29/62 (46%)
Query: 5 TSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKTENI 64
++I WG + GQ G NE+ + + + K L P ++ AG+ + G+ T +
Sbjct: 20 SAIYVWGYNQSGQTG--RNEQEKLLRIPKQLPP-ELFGCPAGANSRWLDISCGREHTAAV 76
Query: 65 PS 66
S
Sbjct: 77 AS 78
Score = 50 (22.7 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 19/67 (28%), Positives = 29/67 (43%)
Query: 9 AWGSGEDGQLGIGNN-EEREWVCVVKALEPY--------KVRSVVAGSRNSLAICDDGKT 59
AWG E GQLG G E + V+ A + K+ + G ++ A+ D G+
Sbjct: 189 AWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYHTAALSDAGEV 248
Query: 60 KTENIPS 66
T + S
Sbjct: 249 YTWGLGS 255
>UNIPROTKB|F1N7C1 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:HIFAGTY EMBL:DAAA02017014 IPI:IPI00825680 UniGene:Bt.42179
Ensembl:ENSBTAT00000027362 NextBio:20874614 Uniprot:F1N7C1
Length = 1016
Score = 371 (135.7 bits), Expect = 5.5e-33, P = 5.5e-33
Identities = 102/309 (33%), Positives = 152/309 (49%)
Query: 67 QVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVI 126
QV A NT ++QAA G H L + G + G N GQ G + + G R I
Sbjct: 17 QVCAGGNT-LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPR---GEQPER---I 69
Query: 127 PQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPP----GDIKQIS-VPVRVQGLEQ 181
P L V V+ G HS+ + +G V+ WG G+ K+ + +P +++ L
Sbjct: 70 P--ALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAG 127
Query: 182 VKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQP-RSQPIPVQGLSGLTLVDIA 238
+K+I V G +H++AL EDG +++WG N +GQLG G P ++ P V+ L G+ L +A
Sbjct: 128 IKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVA 187
Query: 239 AGGWHSTALTDDGEVYGWGRGEHGRLGF-GDNDKSSKMVPQKVNLLAGEDIVQVSCGGTH 297
AGG HS AL+ G +GWG G+L G+N + P + L +V +SCG H
Sbjct: 188 AGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKH 247
Query: 298 SVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVAC 357
+ LT+DG +F+FG +G+LG+ P V R G + + C
Sbjct: 248 TAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVE------RIEG-------LVSQIDC 294
Query: 358 GGRHTLAIV 366
G HTLA +
Sbjct: 295 GSDHTLAYI 303
Score = 323 (118.8 bits), Expect = 7.6e-28, P = 7.6e-28
Identities = 97/286 (33%), Positives = 144/286 (50%)
Query: 40 VRSVVAGSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWG 99
V+S SR L G + E P ++ AL + + G H LAV +GR +AWG
Sbjct: 44 VQSCGDNSRGQLG--RKGTPRGEQ-PERIPALETLNVALVSCGKEHSLAVCHKGRVFAWG 100
Query: 100 GNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG 159
GQ G E K+ T I ++ I K+I QVA G HSV L+ +G V++WG
Sbjct: 101 AASEGQLGIG-EFKETTF-IPKK---IKTLAGIKII--QVACGHYHSVALSEDGQVFSWG 153
Query: 160 QPWPPGDI---KQI---SVPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQ 211
G + K+ + P RV+ LE + L +A G H+ AL G + WG+N GQ
Sbjct: 154 TN-SHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQ 212
Query: 212 LG-TGDTQP--RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGD 268
L +G+ P R +P+ + L L +V I+ G H+ LT DG+V+ +G +G+LG
Sbjct: 213 LALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGH-- 270
Query: 269 NDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVA-LTRDGHIFSFGRG 313
+ + K PQ V + G + Q+ CG H++A + G + SFGRG
Sbjct: 271 DPTAEKRGPQLVERIEGL-VSQIDCGSDHTLAYIYTTGQVVSFGRG 315
Score = 308 (113.5 bits), Expect = 3.0e-26, P = 3.0e-26
Identities = 81/255 (31%), Positives = 131/255 (51%)
Query: 121 RRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVP-----VR 175
RR + Q CA + Q A+G HS++L +G V + G G + + P R
Sbjct: 10 RRPLRERQVCAGGNTLLQAASGEHHSLLLLSDGTVQSCGDN-SRGQLGRKGTPRGEQPER 68
Query: 176 VQGLE--QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ-PIPVQGLSGL 232
+ LE V L++ G H+LA+ G ++AWG GQLG G+ + + P ++ L+G+
Sbjct: 69 IPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGI 128
Query: 233 TLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVS 292
++ +A G +HS AL++DG+V+ WG HG+LG G + S+ PQ+V L G + QV+
Sbjct: 129 KIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLG-KEFPSQASPQRVRSLEGIPLAQVA 187
Query: 293 CGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIA 352
GG HS AL+ G F +G G+L Q + P++I A + G +
Sbjct: 188 AGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYK-PVSIGALKTLG-------VV 239
Query: 353 KLVACGGRHTLAIVE 367
++CG +HT + +
Sbjct: 240 S-ISCGYKHTAVLTQ 253
>UNIPROTKB|Q8IVU3 [details] [associations]
symbol:HERC6 "Probable E3 ubiquitin-protein ligase HERC6"
species:9606 "Homo sapiens" [GO:0005829 "cytosol" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HOVERGEN:HBG050878 HSSP:Q9UEP9 EMBL:AF336798
EMBL:AY653201 EMBL:AK000644 EMBL:AK092403 EMBL:AK295832
EMBL:BC035775 EMBL:BC042047 EMBL:AL833664 EMBL:BX647121
IPI:IPI00168048 IPI:IPI00455627 IPI:IPI00554785
RefSeq:NP_001158608.1 RefSeq:NP_060382.3 UniGene:Hs.529317
ProteinModelPortal:Q8IVU3 SMR:Q8IVU3 IntAct:Q8IVU3 STRING:Q8IVU3
PhosphoSite:Q8IVU3 DMDM:74750679 PaxDb:Q8IVU3 PRIDE:Q8IVU3
Ensembl:ENST00000264346 Ensembl:ENST00000273960
Ensembl:ENST00000380265 GeneID:55008 KEGG:hsa:55008 UCSC:uc011cdi.2
UCSC:uc011cdj.2 CTD:55008 GeneCards:GC04P089299 HGNC:HGNC:26072
HPA:HPA035846 MIM:609249 neXtProt:NX_Q8IVU3 PharmGKB:PA134894313
InParanoid:Q8IVU3 OMA:HIFAGTY GenomeRNAi:55008 NextBio:58353
ArrayExpress:Q8IVU3 Bgee:Q8IVU3 Genevestigator:Q8IVU3
Uniprot:Q8IVU3
Length = 1022
Score = 370 (135.3 bits), Expect = 7.1e-33, P = 7.1e-33
Identities = 100/303 (33%), Positives = 145/303 (47%)
Query: 75 KIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKL 134
+++QAA G H L + R + G N GQ G + R ++ P + L
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQ--------RGELPEPIQALETL 75
Query: 135 IVRQVAAGGTHSVVLTREGHVWTWGQPWPP----GDIKQIS-VPVRVQGLEQVKLIAV-- 187
IV V+ G HS+ + +G V+ WG G+ K+IS P ++ L +K+I V
Sbjct: 76 IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSC 135
Query: 188 GAFHNLALQEDGALWAWGNNEYGQLGTGDTQP-RSQPIPVQGLSGLTLVDIAAGGWHSTA 246
G +H+LAL +D +++WG N +GQLG G P ++ P V+ L G+ L +AAGG HS A
Sbjct: 136 GHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFA 195
Query: 247 LTDDGEVYGWGRGEHGRLGF-GDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDG 305
L+ G +GWG G+L G N P V L +V +SCG H+ LT+DG
Sbjct: 196 LSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDG 255
Query: 306 HIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRR--WIAKLVACGGRHTL 363
+F+FG G+LGY P P G + R + + CG HTL
Sbjct: 256 KVFTFGDNRSGQLGYS---------------PTPEKRGPQLVERIDGLVSQIDCGSYHTL 300
Query: 364 AIV 366
A V
Sbjct: 301 AYV 303
Score = 291 (107.5 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 92/293 (31%), Positives = 142/293 (48%)
Query: 35 LEPYKVRSVVAGSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGR 94
L ++V S SR L G + E +P + AL + + G H LAV +GR
Sbjct: 39 LTNHRVLSCGDNSRGQLG--RRGAQRGE-LPEPIQALETLIVDLVSCGKEHSLAVCHKGR 95
Query: 95 AYAWGGNEYGQCG--EEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTRE 152
+AWG GQ G E E +I+ + + K+I QV+ G HS+ L+++
Sbjct: 96 VFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDI-------KII--QVSCGHYHSLALSKD 146
Query: 153 GHVWTWGQPWPPGDI---KQI---SVPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAW 204
V++WG+ G + K+ + P RV+ LE + L +A G H+ AL G + W
Sbjct: 147 SQVFSWGKN-SHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 205 GNNEYGQLG-TGDTQP--RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEH 261
G+N GQL +G P ++P+ V L L +V I+ G H+ LT DG+V+ +G
Sbjct: 206 GSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRS 265
Query: 262 GRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRD-GHIFSFGRG 313
G+LG+ + K PQ V + G + Q+ CG H++A G + SFG G
Sbjct: 266 GQLGYSPTPE--KRGPQLVERIDGL-VSQIDCGSYHTLAYVHTTGQVVSFGHG 315
Score = 289 (106.8 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 76/246 (30%), Positives = 124/246 (50%)
Query: 131 APKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI-----KQISVPVRVQGLEQ--VK 183
+P + Q A+G HS++L V + G G + ++ +P +Q LE V
Sbjct: 20 SPGAELLQAASGERHSLLLLTNHRVLSCGDN-SRGQLGRRGAQRGELPEPIQALETLIVD 78
Query: 184 LIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS-QPIPVQGLSGLTLVDIAAGGW 242
L++ G H+LA+ G ++AWG GQLG G+ + S P + L+ + ++ ++ G +
Sbjct: 79 LVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHY 138
Query: 243 HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALT 302
HS AL+ D +V+ WG+ HG+LG G + S+ PQ+V L G + QV+ GG HS AL+
Sbjct: 139 HSLALSKDSQVFSWGKNSHGQLGLG-KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Query: 303 RDGHIFSFGRGDHGRLGY-GRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRH 361
G F +G G+L GR V P+++ A +N G ++CG H
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQS--NKPLSVGALKNLG--------VVYISCGDAH 247
Query: 362 TLAIVE 367
T + +
Sbjct: 248 TAVLTQ 253
Score = 260 (96.6 bits), Expect = 8.7e-20, P = 8.7e-20
Identities = 69/195 (35%), Positives = 104/195 (53%)
Query: 175 RVQGLEQVKLI--AVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGL 232
R G +L+ A G H+L L + + + G+N GQLG Q P P+Q L L
Sbjct: 16 RTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETL 75
Query: 233 TLVD-IAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQV 291
+VD ++ G HS A+ G V+ WG G G+LG G+ K P+K+ L I+QV
Sbjct: 76 -IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEF-KEISFTPKKIMTLNDIKIIQV 133
Query: 292 SCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTT-GQPMEVPINIPAPRNAGDGVDRRW 350
SCG HS+AL++D +FS+G+ HG+LG G++ + P V R+ +G+
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRV-------RSL-EGIP--- 182
Query: 351 IAKLVACGGRHTLAI 365
+A+ VA GG H+ A+
Sbjct: 183 LAQ-VAAGGAHSFAL 196
>RGD|1306366 [details] [associations]
symbol:Herc1 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 1" species:10116 "Rattus norvegicus"
[GO:0010507 "negative regulation of autophagy" evidence=ISO]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=ISO] [GO:0050885 "neuromuscular process controlling
balance" evidence=ISO] RGD:1306366 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OrthoDB:EOG40GCPW
GeneTree:ENSGT00700000104312 IPI:IPI00765979
Ensembl:ENSRNOT00000049300 UCSC:RGD:1306366 Uniprot:D3Z9N9
Length = 1203
Score = 344 (126.2 bits), Expect = 6.0e-32, Sum P(2) = 6.0e-32
Identities = 92/331 (27%), Positives = 163/331 (49%)
Query: 40 VRSVVAGSRNSLAICDDGKTKT-ENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAW 98
VR+ GS L + D T + + + + S K+ + H LA +G ++W
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHR-SIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 99 GGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTW 158
G +YG+ G ++++ + K++V V+AG HS +T +G ++TW
Sbjct: 483 GDGDYGKLGHGNSSTQKYPKLIQGPL------QGKVVVC-VSAGYRHSAAVTEDGELYTW 535
Query: 159 GQP----WPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDG-ALWAWGNNEYGQLG 213
G+ GD ++P V+ + V ++ G+ H +AL +DG +W++G + G+LG
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595
Query: 214 TGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSS 273
GDT +P ++ L G+ + + AG S ALT G+VY WG G LG G ++ ++
Sbjct: 596 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATA 653
Query: 274 KMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVP 333
+ P+ + LA IV +S G +H ++L+ D ++++G G+ G G +TG P
Sbjct: 654 -LRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGN--STG-----P 705
Query: 334 INIPAPRNAGDGVDRRWIAKLVACGGRHTLA 364
I P + DG+ + ++ G H+LA
Sbjct: 706 ITKPKKVSGLDGI----AIQQISAGTSHSLA 732
Score = 306 (112.8 bits), Expect = 6.5e-26, P = 6.5e-26
Identities = 77/245 (31%), Positives = 131/245 (53%)
Query: 89 VDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTH-SV 147
V + Y WG N Q E + K ++ + AP Q G + +
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEK-----------ILQPKLAPSFSDAQTIEAGQYCTF 416
Query: 148 VLTREGHVWTWGQP----WPPGDIKQISVPVRV-----QGLEQVKLIAVGAFHNLALQED 198
V++ +G V G+ GD S ++ + +++V H LA +
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE 476
Query: 199 GALWAWGNNEYGQLGTGDTQPRSQPIPVQG-LSGLTLVDIAAGGWHSTALTDDGEVYGWG 257
G +++WG+ +YG+LG G++ + P +QG L G +V ++AG HS A+T+DGE+Y WG
Sbjct: 477 GEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 258 RGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGH-IFSFGRGDHG 316
G+ GRLG GD++ S+ +P V ++ ++ +VSCG +H++AL++DG ++SFG GD+G
Sbjct: 537 EGDFGRLGHGDSN--SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 317 RLGYG 321
+LG+G
Sbjct: 593 KLGHG 597
Score = 300 (110.7 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 88/287 (30%), Positives = 145/287 (50%)
Query: 1 MASTTS--IIAWGSGEDGQLGIGNNEEREWVCVVKA-LEPYKVRSVVAGSRNSLAICDDG 57
+A TT + +WG G+ G+LG GN+ +++ +++ L+ V V AG R+S A+ +DG
Sbjct: 471 LAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDG 530
Query: 58 KTKT----------------ENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRA-YAWGG 100
+ T NIP+ V +SN + + + G H +A+ GR +++GG
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 101 NEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG- 159
+ G+ G DT R+ + ++ + +R+V AG S+ LT G V+ WG
Sbjct: 589 GDNGKLGH-----GDTNRVYKPKVI---EALQGMFIRKVCAGSQSSLALTSTGQVYAWGC 640
Query: 160 -QPWPPGDIKQISV-PVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTG 215
G + ++ P ++ L ++ I++G H L+L D ++AWGNN GQ G G
Sbjct: 641 GACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQG 700
Query: 216 D-TQPRSQPIPVQGLSGLTLVDIAAGGWHS---TALTDDGEVYGWGR 258
+ T P ++P V GL G+ + I+AG HS TAL D +V W R
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 747
Score = 278 (102.9 bits), Expect = 6.4e-23, P = 6.4e-23
Identities = 92/339 (27%), Positives = 157/339 (46%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNS----LAICDDGK--- 58
S+ A G G G+LG+G++ + + + EP++ V+ S+ S LA +G+
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFS 481
Query: 59 -------------TKTENIPSQVNALSNTKIVQAAIGGW-HCLAVDDQGRAYAWGGNEYG 104
+ T+ P + K+V G+ H AV + G Y WG ++G
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 105 QCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGH-VWTWGQ--- 160
+ G D R IP V +V+ G +H++ L+++G VW++G
Sbjct: 542 RLGHG----DSNSRN------IPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDN 591
Query: 161 -PWPPGDIKQISVPVRVQGLEQ--VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDT 217
GD ++ P ++ L+ ++ + G+ +LAL G ++AWG LG G +
Sbjct: 592 GKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCGSS 649
Query: 218 QPRS-QPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMV 276
+ + +P ++ L+ +VDI+ G H +L+ D EVY WG G+ G G N
Sbjct: 650 EATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQG-NSTGPITK 708
Query: 277 PQKVNLLAGEDIVQVSCGGTHSVALT---RDGHIFSFGR 312
P+KV+ L G I Q+S G +HS+A T RD + ++ R
Sbjct: 709 PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 747
Score = 252 (93.8 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 65/226 (28%), Positives = 110/226 (48%)
Query: 148 VLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWA 203
+++ V+ WG G ++I P + I G + + DG++ A
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRA 426
Query: 204 WGNNEYGQLGTGDTQPRS--QPIPVQGLSGLTLVDIAAGG-WHSTALTDDGEVYGWGRGE 260
G YG+LG GD+ +S + + + + V + G H+ A T +GEV+ WG G+
Sbjct: 427 CGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 261 HGRLGFGDNDKSSKMVPQKVN-LLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLG 319
+G+LG G++ S++ P+ + L G+ +V VS G HS A+T DG ++++G GD GRLG
Sbjct: 487 YGKLGHGNS--STQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 320 YGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
+G +P + N G+ V+CG HT+A+
Sbjct: 545 HG----DSNSRNIPTLVKDISNVGE----------VSCGSSHTIAL 576
Score = 186 (70.5 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 52/177 (29%), Positives = 90/177 (50%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKT------ 59
++ ++G G++G+LG G+ V++AL+ +R V AGS++SLA+ G+
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 60 ---------KTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEP 110
T P + L+ T+IV +IG HCL++ YAWG N GQCG+
Sbjct: 642 ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQG- 700
Query: 111 ERKDDTGRILRRDIVIPQRCA--PKLIVRQVAAGGTHSVVLT---REGHVWTWGQPW 162
+ TG I + P++ + + ++Q++AG +HS+ T R+ V W +P+
Sbjct: 701 ---NSTGPITK-----PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHRPY 749
Score = 182 (69.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 52/176 (29%), Positives = 85/176 (48%)
Query: 195 LQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVY 254
+ E ++ WG+N QL G + QP S ++ AG + + ++ DG V
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIE--AGQYCTFVISTDGSVR 425
Query: 255 GWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCG-GT--HSVALTRDGHIFSFG 311
G+G +GRLG GD++ S + +K+ I +VS G+ H++A T +G +FS+G
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTL--KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483
Query: 312 RGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
GD+G+LG+G T + P I P + V+ G RH+ A+ E
Sbjct: 484 DGDYGKLGHGNSST----QKYPKLIQGPLQGK-------VVVCVSAGYRHSAAVTE 528
Score = 47 (21.6 bits), Expect = 6.0e-32, Sum P(2) = 6.0e-32
Identities = 14/61 (22%), Positives = 25/61 (40%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYK-VRSVVAGSRNSLAICDDGKT 59
++ T + WGS QL G E+ + K + +++ AG + I DG
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEK---ILQPKLAPSFSDAQTIEAGQYCTFVISTDGSV 424
Query: 60 K 60
+
Sbjct: 425 R 425
>UNIPROTKB|Q74DR4 [details] [associations]
symbol:GSU1251 "ATS1 domain repeat protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 365 (133.5 bits), Expect = 7.4e-32, P = 7.4e-32
Identities = 102/303 (33%), Positives = 144/303 (47%)
Query: 76 IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLI 135
+ A GG H L + G +A G N++GQ G D TG + +P
Sbjct: 34 VPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLG------DGTGINRTSPVQVPGTW----- 82
Query: 136 VRQVAAGGTHSVVLTREGHVWTWG--------QPWPPGDIKQISV-PVRV-QGLEQVKLI 185
+ VAAG THS+ + +G +W WG QP G + P+R+ G + V +
Sbjct: 83 -KTVAAGTTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGNDWVA-V 140
Query: 186 AVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQG--LSGLTLVDIAAGGWH 243
+ G + L+ DG LW+WGNN +G+LG G T R QP+ V LS V +AAGG H
Sbjct: 141 SAGELTSFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEH 200
Query: 244 STALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTR 303
+ AL DG ++ WG G+LG G P K+ D +S G HSVAL
Sbjct: 201 ALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIG--TDRDWTAISAGEMHSVALKA 258
Query: 304 DGHIFSFGRGDHGRLGYGRKVTTGQPMEVP-INIPAPRNAGDGVDRRWIAKLVACGGRHT 362
DG ++S+G+ G LG G + +P N+ P G G D W+A +A G HT
Sbjct: 259 DGSLWSWGQNLFGELGNG--------VALPGANVTTPTRVGTGSD--WVA--IAAGALHT 306
Query: 363 LAI 365
+A+
Sbjct: 307 VAL 309
Score = 340 (124.7 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 117/386 (30%), Positives = 165/386 (42%)
Query: 9 AWGSGEDGQLGIGNN------------EEREWVCVVKALEPYKVRSVVAGS-----RNSL 51
AWG+ GQLG G +R+W + A E + V GS +N
Sbjct: 212 AWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAI-SAGEMHSVALKADGSLWSWGQNLF 270
Query: 52 AICDDGKTKT-ENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEP 110
+G N+ + + + V A G H +A+ G AWG N G G+
Sbjct: 271 GELGNGVALPGANVTTPTRVGTGSDWVAIAAGALHTVALHRNGTVSAWGNNAQGAVGDGT 330
Query: 111 ERKDDTGRILRRDIVIPQRCAPKLIVRQVA-AGGTH-SVVLTREGHVWTWGQPWPP---- 164
T ++ AP +V VA A GT S + G V+ WG
Sbjct: 331 VANRSTPTLI---------VAPVTLVNNVAIAAGTGVSFSVLANGTVFGWGGNGAGQLGN 381
Query: 165 GDIKQISVPVRVQGLEQVKL-IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQP 223
G ++ P + L + G +L L+ +G LWAWG N GQLG G T P + P
Sbjct: 382 GTFGAVTAPTVLSAGASAWLGVEPGGAFSLGLRSNGTLWAWGGNASGQLGDGTTTPSAIP 441
Query: 224 IPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLL 283
+PV G +G A G HS A+ DG ++ WG G+LG G +S PQ++ +
Sbjct: 442 VPVVGGAG-NWRTTATGTAHSVAVRADGTLWAWGDNSSGQLGIGSTVAAS--TPQQITVT 498
Query: 284 ----AGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
AG D V+ GG HS+ L DG ++S+G G+LG G T P+ I
Sbjct: 499 NPASAGNDWTAVAGGGAHSLGLKADGTLWSWGDNTFGQLGDG---TGTSNRTTPVQI-VT 554
Query: 340 RNAGDGVDRRWIAKLVACGGRHTLAI 365
N G+ DR W+A VA GG +LA+
Sbjct: 555 GNPGN-FDRNWVA--VAAGGVFSLAL 577
Score = 314 (115.6 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 103/315 (32%), Positives = 136/315 (43%)
Query: 45 AGSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYG 104
AGS N DG P QV T A G H L + G +AWG N +G
Sbjct: 56 AGS-NQFGQLGDGTGINRTSPVQVPGTWKT----VAAGTTHSLGIKADGSLWAWGSNLFG 110
Query: 105 QCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPW-- 162
Q G+ G++ P R V+AG S L +G +W+WG
Sbjct: 111 QLGQPLVN----GQLATNKFS-PIRIGTGNDWVAVSAGELTSFGLKGDGTLWSWGNNLFG 165
Query: 163 PPGDIKQISVPVRVQ----GLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGD 216
GD +S P VQ L + +AV G H LALQ DG LWAWG N GQLGTG
Sbjct: 166 ELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQADGTLWAWGANLTGQLGTGG 225
Query: 217 TQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMV 276
T P P++ + I+AG HS AL DG ++ WG+ G LG G + +
Sbjct: 226 TGILPNPTPLKIGTDRDWTAISAGEMHSVALKADGSLWSWGQNLFGELGNGVALPGANVT 285
Query: 277 -PQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPIN 335
P +V G D V ++ G H+VAL R+G + ++G G +G G P +
Sbjct: 286 TPTRVG--TGSDWVAIAAGALHTVALHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAP 343
Query: 336 IPAPRN----AGDGV 346
+ N AG GV
Sbjct: 344 VTLVNNVAIAAGTGV 358
Score = 274 (101.5 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 99/336 (29%), Positives = 144/336 (42%)
Query: 56 DGKTKTENIPSQV-NALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKD 114
DG T IP V N + A G H +AV G +AWG N GQ G
Sbjct: 432 DGTTTPSAIPVPVVGGAGNWRTT--ATGTAHSVAVRADGTLWAWGDNSSGQLGIGSTVAA 489
Query: 115 DTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPW--PPGD---IKQ 169
T + I + + VA GG HS+ L +G +W+WG GD
Sbjct: 490 STPQ----QITVTNPASAGNDWTAVAGGGAHSLGLKADGTLWSWGDNTFGQLGDGTGTSN 545
Query: 170 ISVPVRV----QGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQ--PRS 221
+ PV++ G +AV G +LALQ DG +W WG+N QLGT P +
Sbjct: 546 RTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADGTIWTWGDNSLLQLGTDPAMLTPAT 605
Query: 222 QP-IPVQ-GLSG-------LTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKS 272
Q +P Q ++ + V IAAG H +L DG ++ WG G+LG G +
Sbjct: 606 QRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQADGTLWAWGANSVGQLGNGVT--T 663
Query: 273 SKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
+ P +V G V ++ G +HS+A DG ++++G G+LG G P+
Sbjct: 664 ATFTPVQVINAEGVPYVSLAAGTSHSLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNP 723
Query: 333 -PINIPAPRNAGDGVDRR--WIAKLVACGGRHTLAI 365
P +PA + V W+ + GG H+ A+
Sbjct: 724 QPHTVPARILTSNPVSAADDWL--VATAGGSHSAAL 757
Score = 253 (94.1 bits), Expect = 6.4e-25, Sum P(2) = 6.4e-25
Identities = 63/167 (37%), Positives = 89/167 (53%)
Query: 185 IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHS 244
IA G H L+LQ DG LWAWG N GQLG G T P+ V G+ V +AAG HS
Sbjct: 630 IAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAAGTSHS 689
Query: 245 TALTDDGEVYGWGRGEHGRLGFG----DNDKSSKM---VPQKV---N-LLAGEDIVQVSC 293
A DG ++ WG G+LG G D D + VP ++ N + A +D + +
Sbjct: 690 LAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILTSNPVSAADDWLVATA 749
Query: 294 GGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPR 340
GG+HS AL +G ++++G+ G+LG G TT + ++P + PR
Sbjct: 750 GGSHSAALKSNGTLWTWGQNTSGQLGNG---TTTEA-DIPTALLEPR 792
Score = 253 (94.1 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 69/191 (36%), Positives = 96/191 (50%)
Query: 178 GLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDI 237
G V +A G H L L+ DG LWA G+N++GQLG G R+ P+ V G T +
Sbjct: 30 GWSAVPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQVPG----TWKTV 85
Query: 238 AAGGWHSTALTDDGEVYGWGRGEHGRLG---FGDNDKSSKMVPQKVNLLAGEDIVQVSCG 294
AAG HS + DG ++ WG G+LG ++K P ++ G D V VS G
Sbjct: 86 AAGTTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIG--TGNDWVAVSAG 143
Query: 295 GTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKL 354
S L DG ++S+G G LG G V+ QP++V + P + G R++A
Sbjct: 144 ELTSFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQV---VADPLSNG-----RYVA-- 193
Query: 355 VACGGRHTLAI 365
VA GG H LA+
Sbjct: 194 VAAGGEHALAL 204
Score = 133 (51.9 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 41/122 (33%), Positives = 49/122 (40%)
Query: 45 AGSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYG 104
A NS+ +G T P QV V A G H LA G +AWG N G
Sbjct: 648 AWGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAAGTSHSLAGRSDGTLWAWGNNTSG 707
Query: 105 QCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQ-----VA-AGGTHSVVLTREGHVWTW 158
Q G P D + + +P R V VA AGG+HS L G +WTW
Sbjct: 708 QLGTGPH-PGDADPLNPQPHTVPARILTSNPVSAADDWLVATAGGSHSAALKSNGTLWTW 766
Query: 159 GQ 160
GQ
Sbjct: 767 GQ 768
Score = 106 (42.4 bits), Expect = 6.4e-25, Sum P(2) = 6.4e-25
Identities = 48/170 (28%), Positives = 65/170 (38%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKA-------LEP-----YKVRS---VVAGSRNS 50
++ WG GQLG G V+ A +EP +RS + A N+
Sbjct: 367 TVFGWGGNGAGQLGNGTFGAVTAPTVLSAGASAWLGVEPGGAFSLGLRSNGTLWAWGGNA 426
Query: 51 LAICDDGKTKTENIPSQV-NALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 109
DG T IP V N + A G H +AV G +AWG N GQ G
Sbjct: 427 SGQLGDGTTTPSAIPVPVVGGAGNWRTT--ATGTAHSVAVRADGTLWAWGDNSSGQLGIG 484
Query: 110 PERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG 159
T + I + + VA GG HS+ L +G +W+WG
Sbjct: 485 STVAASTPQ----QITVTNPASAGNDWTAVAGGGAHSLGLKADGTLWSWG 530
Score = 91 (37.1 bits), Expect = 2.4e-23, Sum P(2) = 2.4e-23
Identities = 40/170 (23%), Positives = 64/170 (37%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREW-VCVVKALEPYKVRSVVAGSRNSLAICDDGKTKT--E 62
++ AWG+ G +G G R +V + ++ AG+ S ++ +G
Sbjct: 314 TVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVAIAAGTGVSFSVLANGTVFGWGG 373
Query: 63 NIPSQVN-----ALSNTKIVQAAIGGW--------HCLAVDDQGRAYAWGGNEYGQCGEE 109
N Q+ A++ ++ A W L + G +AWGGN GQ G+
Sbjct: 374 NGAGQLGNGTFGAVTAPTVLSAGASAWLGVEPGGAFSLGLRSNGTLWAWGGNASGQLGD- 432
Query: 110 PERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG 159
G I +P R A G HSV + +G +W WG
Sbjct: 433 -------GTTTPSAIPVPV-VGGAGNWRTTATGTAHSVAVRADGTLWAWG 474
Score = 82 (33.9 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 52/180 (28%), Positives = 73/180 (40%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREW-VCVVKALEPYKVRSVVAGSRNSLAICDDGKT 59
+ S ++ AWG GQLG G V VV + R+ G+ +S+A+ DG
Sbjct: 413 LRSNGTLWAWGGNASGQLGDGTTTPSAIPVPVVGGAGNW--RTTATGTAHSVAVRADGTL 470
Query: 60 KT--EN------IPSQVNALSNTKIV---QAAIGG-WHCLAVDDQGRAYAWGGNEYGQC- 106
+N I S V A + +I A+ G W +A G A++ G G
Sbjct: 471 WAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVA---GGGAHSLGLKADGTLW 527
Query: 107 --GEEP--ERKDDTGRILRRDIVIPQRCAPKLIVRQ---VAAGGTHSVVLTREGHVWTWG 159
G+ + D TG R V P R VAAGG S+ L +G +WTWG
Sbjct: 528 SWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADGTIWTWG 587
Score = 81 (33.6 bits), Expect = 2.6e-22, Sum P(2) = 2.6e-22
Identities = 47/172 (27%), Positives = 67/172 (38%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTK 60
+ S ++ A GS + GQLG G R V P ++V AG+ +SL I DG
Sbjct: 47 LRSDGTLWAAGSNQFGQLGDGTGINRTSPVQV----PGTWKTVAAGTTHSLGIKADGSLW 102
Query: 61 T--ENIPSQ-----VNA-LSNTKIVQAAIG-G--WHCLAVDDQGRAYAWGGNEYGQCGEE 109
N+ Q VN L+ K IG G W ++ + G G
Sbjct: 103 AWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGNDWVAVSAGELTSFGLKGDGTLWSWGNN 162
Query: 110 PERKDDTGRILRRDIVIPQRCAPKLIVRQVA--AGGTHSVVLTREGHVWTWG 159
+ G + R + P R VA AGG H++ L +G +W WG
Sbjct: 163 LFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQADGTLWAWG 214
Score = 53 (23.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 21/88 (23%), Positives = 32/88 (36%)
Query: 203 AWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYG--WGRGE 260
AWGN + +G GD P P+ + LT + W L+ + G +G G
Sbjct: 1408 AWGNGTFVAVGDGDPGTTLHP-PISAPTVLTSTNTGLT-WTRRYLSPGHNIRGIAYGNGV 1465
Query: 261 HGRLGFGDNDKSSKMVPQKVNLLAGEDI 288
+G D Q + L + I
Sbjct: 1466 FVAVGASGYDLDQNASRQAIILTSTNGI 1493
Score = 39 (18.8 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 227 QGLSG-LTLVDIAAGGWHSTALTDDGEV 253
Q +G L L D+A GG A+ +G V
Sbjct: 1210 QPFNGTLNLFDVAYGGGRFVAVGMEGHV 1237
>TIGR_CMR|GSU_1251 [details] [associations]
symbol:GSU_1251 "BNR repeat domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 365 (133.5 bits), Expect = 7.4e-32, P = 7.4e-32
Identities = 102/303 (33%), Positives = 144/303 (47%)
Query: 76 IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLI 135
+ A GG H L + G +A G N++GQ G D TG + +P
Sbjct: 34 VPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLG------DGTGINRTSPVQVPGTW----- 82
Query: 136 VRQVAAGGTHSVVLTREGHVWTWG--------QPWPPGDIKQISV-PVRV-QGLEQVKLI 185
+ VAAG THS+ + +G +W WG QP G + P+R+ G + V +
Sbjct: 83 -KTVAAGTTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGNDWVA-V 140
Query: 186 AVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQG--LSGLTLVDIAAGGWH 243
+ G + L+ DG LW+WGNN +G+LG G T R QP+ V LS V +AAGG H
Sbjct: 141 SAGELTSFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEH 200
Query: 244 STALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTR 303
+ AL DG ++ WG G+LG G P K+ D +S G HSVAL
Sbjct: 201 ALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIG--TDRDWTAISAGEMHSVALKA 258
Query: 304 DGHIFSFGRGDHGRLGYGRKVTTGQPMEVP-INIPAPRNAGDGVDRRWIAKLVACGGRHT 362
DG ++S+G+ G LG G + +P N+ P G G D W+A +A G HT
Sbjct: 259 DGSLWSWGQNLFGELGNG--------VALPGANVTTPTRVGTGSD--WVA--IAAGALHT 306
Query: 363 LAI 365
+A+
Sbjct: 307 VAL 309
Score = 340 (124.7 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 117/386 (30%), Positives = 165/386 (42%)
Query: 9 AWGSGEDGQLGIGNN------------EEREWVCVVKALEPYKVRSVVAGS-----RNSL 51
AWG+ GQLG G +R+W + A E + V GS +N
Sbjct: 212 AWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAI-SAGEMHSVALKADGSLWSWGQNLF 270
Query: 52 AICDDGKTKT-ENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEP 110
+G N+ + + + V A G H +A+ G AWG N G G+
Sbjct: 271 GELGNGVALPGANVTTPTRVGTGSDWVAIAAGALHTVALHRNGTVSAWGNNAQGAVGDGT 330
Query: 111 ERKDDTGRILRRDIVIPQRCAPKLIVRQVA-AGGTH-SVVLTREGHVWTWGQPWPP---- 164
T ++ AP +V VA A GT S + G V+ WG
Sbjct: 331 VANRSTPTLI---------VAPVTLVNNVAIAAGTGVSFSVLANGTVFGWGGNGAGQLGN 381
Query: 165 GDIKQISVPVRVQGLEQVKL-IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQP 223
G ++ P + L + G +L L+ +G LWAWG N GQLG G T P + P
Sbjct: 382 GTFGAVTAPTVLSAGASAWLGVEPGGAFSLGLRSNGTLWAWGGNASGQLGDGTTTPSAIP 441
Query: 224 IPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLL 283
+PV G +G A G HS A+ DG ++ WG G+LG G +S PQ++ +
Sbjct: 442 VPVVGGAG-NWRTTATGTAHSVAVRADGTLWAWGDNSSGQLGIGSTVAAS--TPQQITVT 498
Query: 284 ----AGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
AG D V+ GG HS+ L DG ++S+G G+LG G T P+ I
Sbjct: 499 NPASAGNDWTAVAGGGAHSLGLKADGTLWSWGDNTFGQLGDG---TGTSNRTTPVQI-VT 554
Query: 340 RNAGDGVDRRWIAKLVACGGRHTLAI 365
N G+ DR W+A VA GG +LA+
Sbjct: 555 GNPGN-FDRNWVA--VAAGGVFSLAL 577
Score = 314 (115.6 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 103/315 (32%), Positives = 136/315 (43%)
Query: 45 AGSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYG 104
AGS N DG P QV T A G H L + G +AWG N +G
Sbjct: 56 AGS-NQFGQLGDGTGINRTSPVQVPGTWKT----VAAGTTHSLGIKADGSLWAWGSNLFG 110
Query: 105 QCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPW-- 162
Q G+ G++ P R V+AG S L +G +W+WG
Sbjct: 111 QLGQPLVN----GQLATNKFS-PIRIGTGNDWVAVSAGELTSFGLKGDGTLWSWGNNLFG 165
Query: 163 PPGDIKQISVPVRVQ----GLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGD 216
GD +S P VQ L + +AV G H LALQ DG LWAWG N GQLGTG
Sbjct: 166 ELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQADGTLWAWGANLTGQLGTGG 225
Query: 217 TQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMV 276
T P P++ + I+AG HS AL DG ++ WG+ G LG G + +
Sbjct: 226 TGILPNPTPLKIGTDRDWTAISAGEMHSVALKADGSLWSWGQNLFGELGNGVALPGANVT 285
Query: 277 -PQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPIN 335
P +V G D V ++ G H+VAL R+G + ++G G +G G P +
Sbjct: 286 TPTRVG--TGSDWVAIAAGALHTVALHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAP 343
Query: 336 IPAPRN----AGDGV 346
+ N AG GV
Sbjct: 344 VTLVNNVAIAAGTGV 358
Score = 274 (101.5 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 99/336 (29%), Positives = 144/336 (42%)
Query: 56 DGKTKTENIPSQV-NALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKD 114
DG T IP V N + A G H +AV G +AWG N GQ G
Sbjct: 432 DGTTTPSAIPVPVVGGAGNWRTT--ATGTAHSVAVRADGTLWAWGDNSSGQLGIGSTVAA 489
Query: 115 DTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPW--PPGD---IKQ 169
T + I + + VA GG HS+ L +G +W+WG GD
Sbjct: 490 STPQ----QITVTNPASAGNDWTAVAGGGAHSLGLKADGTLWSWGDNTFGQLGDGTGTSN 545
Query: 170 ISVPVRV----QGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQ--PRS 221
+ PV++ G +AV G +LALQ DG +W WG+N QLGT P +
Sbjct: 546 RTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADGTIWTWGDNSLLQLGTDPAMLTPAT 605
Query: 222 QP-IPVQ-GLSG-------LTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKS 272
Q +P Q ++ + V IAAG H +L DG ++ WG G+LG G +
Sbjct: 606 QRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQADGTLWAWGANSVGQLGNGVT--T 663
Query: 273 SKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
+ P +V G V ++ G +HS+A DG ++++G G+LG G P+
Sbjct: 664 ATFTPVQVINAEGVPYVSLAAGTSHSLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNP 723
Query: 333 -PINIPAPRNAGDGVDRR--WIAKLVACGGRHTLAI 365
P +PA + V W+ + GG H+ A+
Sbjct: 724 QPHTVPARILTSNPVSAADDWL--VATAGGSHSAAL 757
Score = 253 (94.1 bits), Expect = 6.4e-25, Sum P(2) = 6.4e-25
Identities = 63/167 (37%), Positives = 89/167 (53%)
Query: 185 IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHS 244
IA G H L+LQ DG LWAWG N GQLG G T P+ V G+ V +AAG HS
Sbjct: 630 IAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAAGTSHS 689
Query: 245 TALTDDGEVYGWGRGEHGRLGFG----DNDKSSKM---VPQKV---N-LLAGEDIVQVSC 293
A DG ++ WG G+LG G D D + VP ++ N + A +D + +
Sbjct: 690 LAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILTSNPVSAADDWLVATA 749
Query: 294 GGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPR 340
GG+HS AL +G ++++G+ G+LG G TT + ++P + PR
Sbjct: 750 GGSHSAALKSNGTLWTWGQNTSGQLGNG---TTTEA-DIPTALLEPR 792
Score = 253 (94.1 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 69/191 (36%), Positives = 96/191 (50%)
Query: 178 GLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDI 237
G V +A G H L L+ DG LWA G+N++GQLG G R+ P+ V G T +
Sbjct: 30 GWSAVPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQVPG----TWKTV 85
Query: 238 AAGGWHSTALTDDGEVYGWGRGEHGRLG---FGDNDKSSKMVPQKVNLLAGEDIVQVSCG 294
AAG HS + DG ++ WG G+LG ++K P ++ G D V VS G
Sbjct: 86 AAGTTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIG--TGNDWVAVSAG 143
Query: 295 GTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKL 354
S L DG ++S+G G LG G V+ QP++V + P + G R++A
Sbjct: 144 ELTSFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQV---VADPLSNG-----RYVA-- 193
Query: 355 VACGGRHTLAI 365
VA GG H LA+
Sbjct: 194 VAAGGEHALAL 204
Score = 133 (51.9 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 41/122 (33%), Positives = 49/122 (40%)
Query: 45 AGSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYG 104
A NS+ +G T P QV V A G H LA G +AWG N G
Sbjct: 648 AWGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAAGTSHSLAGRSDGTLWAWGNNTSG 707
Query: 105 QCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQ-----VA-AGGTHSVVLTREGHVWTW 158
Q G P D + + +P R V VA AGG+HS L G +WTW
Sbjct: 708 QLGTGPH-PGDADPLNPQPHTVPARILTSNPVSAADDWLVATAGGSHSAALKSNGTLWTW 766
Query: 159 GQ 160
GQ
Sbjct: 767 GQ 768
Score = 106 (42.4 bits), Expect = 6.4e-25, Sum P(2) = 6.4e-25
Identities = 48/170 (28%), Positives = 65/170 (38%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKA-------LEP-----YKVRS---VVAGSRNS 50
++ WG GQLG G V+ A +EP +RS + A N+
Sbjct: 367 TVFGWGGNGAGQLGNGTFGAVTAPTVLSAGASAWLGVEPGGAFSLGLRSNGTLWAWGGNA 426
Query: 51 LAICDDGKTKTENIPSQV-NALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 109
DG T IP V N + A G H +AV G +AWG N GQ G
Sbjct: 427 SGQLGDGTTTPSAIPVPVVGGAGNWRTT--ATGTAHSVAVRADGTLWAWGDNSSGQLGIG 484
Query: 110 PERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG 159
T + I + + VA GG HS+ L +G +W+WG
Sbjct: 485 STVAASTPQ----QITVTNPASAGNDWTAVAGGGAHSLGLKADGTLWSWG 530
Score = 91 (37.1 bits), Expect = 2.4e-23, Sum P(2) = 2.4e-23
Identities = 40/170 (23%), Positives = 64/170 (37%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREW-VCVVKALEPYKVRSVVAGSRNSLAICDDGKTKT--E 62
++ AWG+ G +G G R +V + ++ AG+ S ++ +G
Sbjct: 314 TVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVAIAAGTGVSFSVLANGTVFGWGG 373
Query: 63 NIPSQVN-----ALSNTKIVQAAIGGW--------HCLAVDDQGRAYAWGGNEYGQCGEE 109
N Q+ A++ ++ A W L + G +AWGGN GQ G+
Sbjct: 374 NGAGQLGNGTFGAVTAPTVLSAGASAWLGVEPGGAFSLGLRSNGTLWAWGGNASGQLGD- 432
Query: 110 PERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG 159
G I +P R A G HSV + +G +W WG
Sbjct: 433 -------GTTTPSAIPVPV-VGGAGNWRTTATGTAHSVAVRADGTLWAWG 474
Score = 82 (33.9 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 52/180 (28%), Positives = 73/180 (40%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREW-VCVVKALEPYKVRSVVAGSRNSLAICDDGKT 59
+ S ++ AWG GQLG G V VV + R+ G+ +S+A+ DG
Sbjct: 413 LRSNGTLWAWGGNASGQLGDGTTTPSAIPVPVVGGAGNW--RTTATGTAHSVAVRADGTL 470
Query: 60 KT--EN------IPSQVNALSNTKIV---QAAIGG-WHCLAVDDQGRAYAWGGNEYGQC- 106
+N I S V A + +I A+ G W +A G A++ G G
Sbjct: 471 WAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVA---GGGAHSLGLKADGTLW 527
Query: 107 --GEEP--ERKDDTGRILRRDIVIPQRCAPKLIVRQ---VAAGGTHSVVLTREGHVWTWG 159
G+ + D TG R V P R VAAGG S+ L +G +WTWG
Sbjct: 528 SWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADGTIWTWG 587
Score = 81 (33.6 bits), Expect = 2.6e-22, Sum P(2) = 2.6e-22
Identities = 47/172 (27%), Positives = 67/172 (38%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTK 60
+ S ++ A GS + GQLG G R V P ++V AG+ +SL I DG
Sbjct: 47 LRSDGTLWAAGSNQFGQLGDGTGINRTSPVQV----PGTWKTVAAGTTHSLGIKADGSLW 102
Query: 61 T--ENIPSQ-----VNA-LSNTKIVQAAIG-G--WHCLAVDDQGRAYAWGGNEYGQCGEE 109
N+ Q VN L+ K IG G W ++ + G G
Sbjct: 103 AWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGNDWVAVSAGELTSFGLKGDGTLWSWGNN 162
Query: 110 PERKDDTGRILRRDIVIPQRCAPKLIVRQVA--AGGTHSVVLTREGHVWTWG 159
+ G + R + P R VA AGG H++ L +G +W WG
Sbjct: 163 LFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQADGTLWAWG 214
Score = 53 (23.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 21/88 (23%), Positives = 32/88 (36%)
Query: 203 AWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYG--WGRGE 260
AWGN + +G GD P P+ + LT + W L+ + G +G G
Sbjct: 1408 AWGNGTFVAVGDGDPGTTLHP-PISAPTVLTSTNTGLT-WTRRYLSPGHNIRGIAYGNGV 1465
Query: 261 HGRLGFGDNDKSSKMVPQKVNLLAGEDI 288
+G D Q + L + I
Sbjct: 1466 FVAVGASGYDLDQNASRQAIILTSTNGI 1493
Score = 39 (18.8 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 227 QGLSG-LTLVDIAAGGWHSTALTDDGEV 253
Q +G L L D+A GG A+ +G V
Sbjct: 1210 QPFNGTLNLFDVAYGGGRFVAVGMEGHV 1237
>WB|WBGene00021685 [details] [associations]
symbol:herc-1 species:6239 "Caenorhabditis elegans"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006464 "cellular
protein modification process" evidence=IEA] [GO:0019915 "lipid
storage" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452 EMBL:FO081800
HSSP:Q05086 RefSeq:NP_490834.1 ProteinModelPortal:Q9BL11 SMR:Q9BL11
STRING:Q9BL11 PaxDb:Q9BL11 EnsemblMetazoa:Y48G8AL.1.1
EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700 KEGG:cel:CELE_Y48G8AL.1
UCSC:Y48G8AL.1 CTD:171700 WormBase:Y48G8AL.1 InParanoid:Q9BL11
OMA:PRELMEL NextBio:872357 Uniprot:Q9BL11
Length = 1019
Score = 354 (129.7 bits), Expect = 3.7e-31, P = 3.7e-31
Identities = 105/347 (30%), Positives = 168/347 (48%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVC--VVKA---LEPYKVRSVVAGSRNSLAICDDGK--- 58
++ G +GQLG+ +E V ++ A ++ V SV G ++++ + DGK
Sbjct: 5 LLGCGHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWS 64
Query: 59 ------------TKTENIPS--QVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYG 104
++TE S V+ S+ KI+Q + G H ++V D GR +AWG NE+G
Sbjct: 65 VGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTDDGRVFAWGSNEHG 124
Query: 105 QCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPP 164
Q G E + G P+R + QVA+G H + L G V+ WG+
Sbjct: 125 QLGME-SKFTWQGT--------PRRVQEINDIVQVASGSNHCIALDEGGRVFVWGEQ--- 172
Query: 165 GDIKQISVPVRVQGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ 222
D + I P V+ L V ++ V GA H LAL GA++ WG N G+LG D +P++
Sbjct: 173 ADGRCIHRPEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQTS 232
Query: 223 PIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNL 282
V + GL +V+ A G H+ LT G + +G G+ GFG + + P V+
Sbjct: 233 VQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEK-RTNPTAVSD 291
Query: 283 LAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQP 329
L G + +++ G H++A+ + G + FG G+LG G+ +T P
Sbjct: 292 LIGSHVTRIAAGACHTIAICK-GAPYPFGLNSSGQLGNGKIMTQSTP 337
Score = 200 (75.5 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 72/256 (28%), Positives = 112/256 (43%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYK-VRSVVAGSRNSLAICDDGKT------ 59
+ AWGS E GQLG+ + W + ++ + V +GS + +A+ + G+
Sbjct: 115 VFAWGSNEHGQLGM--ESKFTWQGTPRRVQEINDIVQVASGSNHCIALDEGGRVFVWGEQ 172
Query: 60 ---KTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDT 116
+ + P V LS IV+ G HCLA+ G + WG N G+ G + R +
Sbjct: 173 ADGRCIHRPEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQTS 232
Query: 117 GRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP--WPPGDIKQISV-- 172
+ + + L V + A G H+V+LT G +++G G K++
Sbjct: 233 VQHVHQ--------MDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRT 284
Query: 173 -PVRVQGL--EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGL 229
P V L V IA GA H +A+ + GA + +G N GQLG G +S P L
Sbjct: 285 NPTAVSDLIGSHVTRIAAGACHTIAICK-GAPYPFGLNSSGQLGNGKIMTQSTPRKTDEL 343
Query: 230 SGLTLVDIAAGGWHST 245
+T V G+H T
Sbjct: 344 DHVTGV---FAGYHQT 356
>UNIPROTKB|Q9BL11 [details] [associations]
symbol:herc-1 "Protein HERC-1" species:6239 "Caenorhabditis
elegans" [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452
EMBL:FO081800 HSSP:Q05086 RefSeq:NP_490834.1
ProteinModelPortal:Q9BL11 SMR:Q9BL11 STRING:Q9BL11 PaxDb:Q9BL11
EnsemblMetazoa:Y48G8AL.1.1 EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700
KEGG:cel:CELE_Y48G8AL.1 UCSC:Y48G8AL.1 CTD:171700
WormBase:Y48G8AL.1 InParanoid:Q9BL11 OMA:PRELMEL NextBio:872357
Uniprot:Q9BL11
Length = 1019
Score = 354 (129.7 bits), Expect = 3.7e-31, P = 3.7e-31
Identities = 105/347 (30%), Positives = 168/347 (48%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVC--VVKA---LEPYKVRSVVAGSRNSLAICDDGK--- 58
++ G +GQLG+ +E V ++ A ++ V SV G ++++ + DGK
Sbjct: 5 LLGCGHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWS 64
Query: 59 ------------TKTENIPS--QVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYG 104
++TE S V+ S+ KI+Q + G H ++V D GR +AWG NE+G
Sbjct: 65 VGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTDDGRVFAWGSNEHG 124
Query: 105 QCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPP 164
Q G E + G P+R + QVA+G H + L G V+ WG+
Sbjct: 125 QLGME-SKFTWQGT--------PRRVQEINDIVQVASGSNHCIALDEGGRVFVWGEQ--- 172
Query: 165 GDIKQISVPVRVQGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ 222
D + I P V+ L V ++ V GA H LAL GA++ WG N G+LG D +P++
Sbjct: 173 ADGRCIHRPEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQTS 232
Query: 223 PIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNL 282
V + GL +V+ A G H+ LT G + +G G+ GFG + + P V+
Sbjct: 233 VQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEK-RTNPTAVSD 291
Query: 283 LAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQP 329
L G + +++ G H++A+ + G + FG G+LG G+ +T P
Sbjct: 292 LIGSHVTRIAAGACHTIAICK-GAPYPFGLNSSGQLGNGKIMTQSTP 337
Score = 200 (75.5 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 72/256 (28%), Positives = 112/256 (43%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYK-VRSVVAGSRNSLAICDDGKT------ 59
+ AWGS E GQLG+ + W + ++ + V +GS + +A+ + G+
Sbjct: 115 VFAWGSNEHGQLGM--ESKFTWQGTPRRVQEINDIVQVASGSNHCIALDEGGRVFVWGEQ 172
Query: 60 ---KTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDT 116
+ + P V LS IV+ G HCLA+ G + WG N G+ G + R +
Sbjct: 173 ADGRCIHRPEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQTS 232
Query: 117 GRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP--WPPGDIKQISV-- 172
+ + + L V + A G H+V+LT G +++G G K++
Sbjct: 233 VQHVHQ--------MDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRT 284
Query: 173 -PVRVQGL--EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGL 229
P V L V IA GA H +A+ + GA + +G N GQLG G +S P L
Sbjct: 285 NPTAVSDLIGSHVTRIAAGACHTIAICK-GAPYPFGLNSSGQLGNGKIMTQSTPRKTDEL 343
Query: 230 SGLTLVDIAAGGWHST 245
+T V G+H T
Sbjct: 344 DHVTGV---FAGYHQT 356
>UNIPROTKB|Q74AS9 [details] [associations]
symbol:GSU2272 "ATS1 domain repeat lipoprotein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 304 (112.1 bits), Expect = 3.8e-31, Sum P(2) = 3.8e-31
Identities = 91/300 (30%), Positives = 142/300 (47%)
Query: 46 GSRNSLAICDDGKT-KTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYG 104
GS ++ I D T T + P ++ + Q A GG H +A+ G +AWG N G
Sbjct: 111 GSNSAGQIGRDPATVPTSSTPVKIGGFGGA-VQQVAAGGLHSMALAG-GTVWAWGSNSAG 168
Query: 105 QCGEEPERKDDTGRILRRDIVIPQR-CAPKLIVRQVAAGGTHSVVLTR-EGHVWTWGQPW 162
Q P R R + + AP IV AGG+HS+ T E + W
Sbjct: 169 QLALNPI--SSATRFAPRQVETAKLPIAPTAIV----AGGSHSIAYTSTEAYAWGNNASG 222
Query: 163 PPGDIKQIS--VPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQ 218
G+ +S +P +VQ + + I+ G HNLAL GA+WAWG+N YGQLG G T
Sbjct: 223 QLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNLALDSTGAIWAWGSNAYGQLGNGTTT 282
Query: 219 PRSQPIPVQGLSGLT-LVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDN-DKSSKMV 276
+S P+ + +G+T +D+ AG HS A+ + VY WG G L G D+ S
Sbjct: 283 NQSTPVQLTLPAGVTGFIDVFAGPSHSVAVASNFTVYTWGFNTLGLLSVGTTGDQLSPAQ 342
Query: 277 PQKVNLLAGEDIVQVSCGGTHSVALTRDGH--IFSFGRGDHGRLGYGRKVTTGQPMEVPI 334
+ + + D+ +V G+ + ++G ++++G +G+LG G P++V +
Sbjct: 343 VRDASNVPFTDVERVVLLGSFFTIVKKNGSGGMWAWGYNGYGQLGDGTTSNRTAPVQVAL 402
Score = 293 (108.2 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
Identities = 97/295 (32%), Positives = 131/295 (44%)
Query: 56 DGKTKTENIPSQVNALSNTKIVQAAIGGWHCLAV---DDQGRAYAWGGNEYGQCGEEPER 112
DG T + P ++ T A G H LA+ D+ AWG N GQ G +P
Sbjct: 65 DGTTTSAATPKRLRLGFATYSSGFATGASHTLAIARFDNVSGVRAWGSNSAGQIGRDPA- 123
Query: 113 KDDTGRILRRDIVIPQRCAPKLI------VRQVAAGGTHSVVLTREGHVWTWGQPWPPGD 166
+P P I V+QVAAGG HS+ L G VW WG G
Sbjct: 124 ------------TVPTSSTPVKIGGFGGAVQQVAAGGLHSMALAG-GTVWAWGSN-SAGQ 169
Query: 167 I--KQISVPVRV--QGLEQVKL------IAVGAFHNLALQEDGALWAWGNNEYGQLGTGD 216
+ IS R + +E KL I G H++A A +AWGNN GQLG G
Sbjct: 170 LALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAYTSTEA-YAWGNNASGQLGNGT 228
Query: 217 TQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMV 276
T P VQ S +T+ I+AGG H+ AL G ++ WG +G+LG G S
Sbjct: 229 TLSNHMPQKVQLPSSITIRKISAGGSHNLALDSTGAIWAWGSNAYGQLGNGTTTNQS--T 286
Query: 277 PQKVNLLAG-EDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPM 330
P ++ L AG + V G +HSVA+ + ++++G G L G TTG +
Sbjct: 287 PVQLTLPAGVTGFIDVFAGPSHSVAVASNFTVYTWGFNTLGLLSVG---TTGDQL 338
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 95/320 (29%), Positives = 142/320 (44%)
Query: 32 VKALEPYKVRSVVAGSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDD 91
+K + +++ +V+A S L+ C DG ++P +T I A H +
Sbjct: 1 MKNIINFRMAAVLA-SCTLLSACADG-----DLPYS----DSTSISSPAYS--HSAVFQN 48
Query: 92 QGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTR 151
WG NE GQ G+ T + LR A G +H++ + R
Sbjct: 49 MTTLAVWGNNESGQLGDGTTTSAATPKRLRLGFATYSS--------GFATGASHTLAIAR 100
Query: 152 EGHVW---TWGQPWP------PGDIKQISVPVRVQGLE-QVKLIAVGAFHNLALQEDGAL 201
+V WG P + S PV++ G V+ +A G H++AL G +
Sbjct: 101 FDNVSGVRAWGSNSAGQIGRDPATVPTSSTPVKIGGFGGAVQQVAAGGLHSMALA-GGTV 159
Query: 202 WAWGNNEYGQLGTGDTQPRSQPIPVQ-GLSGLTLVD--IAAGGWHSTALTDDGEVYGWGR 258
WAWG+N GQL ++ P Q + L + I AGG HS A T E Y WG
Sbjct: 160 WAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAYTST-EAYAWGN 218
Query: 259 GEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRL 318
G+LG G S +PQKV L + I ++S GG+H++AL G I+++G +G+L
Sbjct: 219 NASGQLGNGTT--LSNHMPQKVQLPSSITIRKISAGGSHNLALDSTGAIWAWGSNAYGQL 276
Query: 319 GYGRKVTTGQPMEVPINIPA 338
G G TT Q V + +PA
Sbjct: 277 GNG--TTTNQSTPVQLTLPA 294
Score = 209 (78.6 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 61/203 (30%), Positives = 91/203 (44%)
Query: 38 YKVRSVVAGSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYA 97
Y A N+ +G T + ++P +V S+ I + + GG H LA+D G +A
Sbjct: 208 YTSTEAYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNLALDSTGAIWA 267
Query: 98 WGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWT 157
WG N YGQ G T + +P + V AG +HSV + V+T
Sbjct: 268 WGSNAYGQLGNGTTTNQSTPV----QLTLPAGVTGFI---DVFAGPSHSVAVASNFTVYT 320
Query: 158 WG-------QPWPPGDIKQISVPVRVQGLEQV------KLIAVGAFHNLALQE-DGALWA 203
WG GD Q+S P +V+ V +++ +G+F + + G +WA
Sbjct: 321 WGFNTLGLLSVGTTGD--QLS-PAQVRDASNVPFTDVERVVLLGSFFTIVKKNGSGGMWA 377
Query: 204 WGNNEYGQLGTGDTQPRSQPIPV 226
WG N YGQLG G T R+ P+ V
Sbjct: 378 WGYNGYGQLGDGTTSNRTAPVQV 400
Score = 197 (74.4 bits), Expect = 8.5e-15, Sum P(2) = 8.5e-15
Identities = 70/254 (27%), Positives = 110/254 (43%)
Query: 45 AGSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAI--GGWHCLAVDDQGRAYAWGGNE 102
+ S LA+ + + T P QV + I AI GG H +A AYAWG N
Sbjct: 164 SNSAGQLAL-NPISSATRFAPRQVET-AKLPIAPTAIVAGGSHSIAYTST-EAYAWGNNA 220
Query: 103 YGQCGEEPERKDDTGRILRRDIVIPQRCA-PKLI-VRQVAAGGTHSVVLTREGHVWTWGQ 160
GQ G G L + PQ+ P I +R+++AGG+H++ L G +W WG
Sbjct: 221 SGQLGN--------GTTLSNHM--PQKVQLPSSITIRKISAGGSHNLALDSTGAIWAWGS 270
Query: 161 ----PWPPGDIKQISVPVRVQ---GLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLG 213
G S PV++ G+ + G H++A+ + ++ WG N G L
Sbjct: 271 NAYGQLGNGTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAVASNFTVYTWGFNTLGLLS 330
Query: 214 TGDTQPRSQPIPVQGLSGLTLVDIAA----GGWHSTALTD-DGEVYGWGRGEHGRLGFGD 268
G T + P V+ S + D+ G + + + G ++ WG +G+LG D
Sbjct: 331 VGTTGDQLSPAQVRDASNVPFTDVERVVLLGSFFTIVKKNGSGGMWAWGYNGYGQLG--D 388
Query: 269 NDKSSKMVPQKVNL 282
S++ P +V L
Sbjct: 389 GTTSNRTAPVQVAL 402
Score = 54 (24.1 bits), Expect = 3.8e-31, Sum P(2) = 3.8e-31
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 5 TSIIAWGSGEDGQLGIG 21
T++ WG+ E GQLG G
Sbjct: 50 TTLAVWGNNESGQLGDG 66
Score = 48 (22.0 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 6 SIIAWGSGEDGQLGIG--NNEEREWVCVVKALE-PYKVRSVVAGSRNSLA 52
++ AWGS GQL + ++ R V+ + P ++VAG +S+A
Sbjct: 158 TVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIA 207
Score = 46 (21.3 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 3 STTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYK-------VRSVVAGSRNSLAI 53
+ + + AWGS GQ+G R+ V + P K V+ V AG +S+A+
Sbjct: 103 NVSGVRAWGSNSAGQIG------RDPATVPTSSTPVKIGGFGGAVQQVAAGGLHSMAL 154
>TIGR_CMR|GSU_2272 [details] [associations]
symbol:GSU_2272 "lipoprotein, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 304 (112.1 bits), Expect = 3.8e-31, Sum P(2) = 3.8e-31
Identities = 91/300 (30%), Positives = 142/300 (47%)
Query: 46 GSRNSLAICDDGKT-KTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYG 104
GS ++ I D T T + P ++ + Q A GG H +A+ G +AWG N G
Sbjct: 111 GSNSAGQIGRDPATVPTSSTPVKIGGFGGA-VQQVAAGGLHSMALAG-GTVWAWGSNSAG 168
Query: 105 QCGEEPERKDDTGRILRRDIVIPQR-CAPKLIVRQVAAGGTHSVVLTR-EGHVWTWGQPW 162
Q P R R + + AP IV AGG+HS+ T E + W
Sbjct: 169 QLALNPI--SSATRFAPRQVETAKLPIAPTAIV----AGGSHSIAYTSTEAYAWGNNASG 222
Query: 163 PPGDIKQIS--VPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQ 218
G+ +S +P +VQ + + I+ G HNLAL GA+WAWG+N YGQLG G T
Sbjct: 223 QLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNLALDSTGAIWAWGSNAYGQLGNGTTT 282
Query: 219 PRSQPIPVQGLSGLT-LVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDN-DKSSKMV 276
+S P+ + +G+T +D+ AG HS A+ + VY WG G L G D+ S
Sbjct: 283 NQSTPVQLTLPAGVTGFIDVFAGPSHSVAVASNFTVYTWGFNTLGLLSVGTTGDQLSPAQ 342
Query: 277 PQKVNLLAGEDIVQVSCGGTHSVALTRDGH--IFSFGRGDHGRLGYGRKVTTGQPMEVPI 334
+ + + D+ +V G+ + ++G ++++G +G+LG G P++V +
Sbjct: 343 VRDASNVPFTDVERVVLLGSFFTIVKKNGSGGMWAWGYNGYGQLGDGTTSNRTAPVQVAL 402
Score = 293 (108.2 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
Identities = 97/295 (32%), Positives = 131/295 (44%)
Query: 56 DGKTKTENIPSQVNALSNTKIVQAAIGGWHCLAV---DDQGRAYAWGGNEYGQCGEEPER 112
DG T + P ++ T A G H LA+ D+ AWG N GQ G +P
Sbjct: 65 DGTTTSAATPKRLRLGFATYSSGFATGASHTLAIARFDNVSGVRAWGSNSAGQIGRDPA- 123
Query: 113 KDDTGRILRRDIVIPQRCAPKLI------VRQVAAGGTHSVVLTREGHVWTWGQPWPPGD 166
+P P I V+QVAAGG HS+ L G VW WG G
Sbjct: 124 ------------TVPTSSTPVKIGGFGGAVQQVAAGGLHSMALAG-GTVWAWGSN-SAGQ 169
Query: 167 I--KQISVPVRV--QGLEQVKL------IAVGAFHNLALQEDGALWAWGNNEYGQLGTGD 216
+ IS R + +E KL I G H++A A +AWGNN GQLG G
Sbjct: 170 LALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAYTSTEA-YAWGNNASGQLGNGT 228
Query: 217 TQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMV 276
T P VQ S +T+ I+AGG H+ AL G ++ WG +G+LG G S
Sbjct: 229 TLSNHMPQKVQLPSSITIRKISAGGSHNLALDSTGAIWAWGSNAYGQLGNGTTTNQS--T 286
Query: 277 PQKVNLLAG-EDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPM 330
P ++ L AG + V G +HSVA+ + ++++G G L G TTG +
Sbjct: 287 PVQLTLPAGVTGFIDVFAGPSHSVAVASNFTVYTWGFNTLGLLSVG---TTGDQL 338
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 95/320 (29%), Positives = 142/320 (44%)
Query: 32 VKALEPYKVRSVVAGSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDD 91
+K + +++ +V+A S L+ C DG ++P +T I A H +
Sbjct: 1 MKNIINFRMAAVLA-SCTLLSACADG-----DLPYS----DSTSISSPAYS--HSAVFQN 48
Query: 92 QGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTR 151
WG NE GQ G+ T + LR A G +H++ + R
Sbjct: 49 MTTLAVWGNNESGQLGDGTTTSAATPKRLRLGFATYSS--------GFATGASHTLAIAR 100
Query: 152 EGHVW---TWGQPWP------PGDIKQISVPVRVQGLE-QVKLIAVGAFHNLALQEDGAL 201
+V WG P + S PV++ G V+ +A G H++AL G +
Sbjct: 101 FDNVSGVRAWGSNSAGQIGRDPATVPTSSTPVKIGGFGGAVQQVAAGGLHSMALA-GGTV 159
Query: 202 WAWGNNEYGQLGTGDTQPRSQPIPVQ-GLSGLTLVD--IAAGGWHSTALTDDGEVYGWGR 258
WAWG+N GQL ++ P Q + L + I AGG HS A T E Y WG
Sbjct: 160 WAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAYTST-EAYAWGN 218
Query: 259 GEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRL 318
G+LG G S +PQKV L + I ++S GG+H++AL G I+++G +G+L
Sbjct: 219 NASGQLGNGTT--LSNHMPQKVQLPSSITIRKISAGGSHNLALDSTGAIWAWGSNAYGQL 276
Query: 319 GYGRKVTTGQPMEVPINIPA 338
G G TT Q V + +PA
Sbjct: 277 GNG--TTTNQSTPVQLTLPA 294
Score = 209 (78.6 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 61/203 (30%), Positives = 91/203 (44%)
Query: 38 YKVRSVVAGSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYA 97
Y A N+ +G T + ++P +V S+ I + + GG H LA+D G +A
Sbjct: 208 YTSTEAYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNLALDSTGAIWA 267
Query: 98 WGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWT 157
WG N YGQ G T + +P + V AG +HSV + V+T
Sbjct: 268 WGSNAYGQLGNGTTTNQSTPV----QLTLPAGVTGFI---DVFAGPSHSVAVASNFTVYT 320
Query: 158 WG-------QPWPPGDIKQISVPVRVQGLEQV------KLIAVGAFHNLALQE-DGALWA 203
WG GD Q+S P +V+ V +++ +G+F + + G +WA
Sbjct: 321 WGFNTLGLLSVGTTGD--QLS-PAQVRDASNVPFTDVERVVLLGSFFTIVKKNGSGGMWA 377
Query: 204 WGNNEYGQLGTGDTQPRSQPIPV 226
WG N YGQLG G T R+ P+ V
Sbjct: 378 WGYNGYGQLGDGTTSNRTAPVQV 400
Score = 197 (74.4 bits), Expect = 8.5e-15, Sum P(2) = 8.5e-15
Identities = 70/254 (27%), Positives = 110/254 (43%)
Query: 45 AGSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAI--GGWHCLAVDDQGRAYAWGGNE 102
+ S LA+ + + T P QV + I AI GG H +A AYAWG N
Sbjct: 164 SNSAGQLAL-NPISSATRFAPRQVET-AKLPIAPTAIVAGGSHSIAYTST-EAYAWGNNA 220
Query: 103 YGQCGEEPERKDDTGRILRRDIVIPQRCA-PKLI-VRQVAAGGTHSVVLTREGHVWTWGQ 160
GQ G G L + PQ+ P I +R+++AGG+H++ L G +W WG
Sbjct: 221 SGQLGN--------GTTLSNHM--PQKVQLPSSITIRKISAGGSHNLALDSTGAIWAWGS 270
Query: 161 ----PWPPGDIKQISVPVRVQ---GLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLG 213
G S PV++ G+ + G H++A+ + ++ WG N G L
Sbjct: 271 NAYGQLGNGTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAVASNFTVYTWGFNTLGLLS 330
Query: 214 TGDTQPRSQPIPVQGLSGLTLVDIAA----GGWHSTALTD-DGEVYGWGRGEHGRLGFGD 268
G T + P V+ S + D+ G + + + G ++ WG +G+LG D
Sbjct: 331 VGTTGDQLSPAQVRDASNVPFTDVERVVLLGSFFTIVKKNGSGGMWAWGYNGYGQLG--D 388
Query: 269 NDKSSKMVPQKVNL 282
S++ P +V L
Sbjct: 389 GTTSNRTAPVQVAL 402
Score = 54 (24.1 bits), Expect = 3.8e-31, Sum P(2) = 3.8e-31
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 5 TSIIAWGSGEDGQLGIG 21
T++ WG+ E GQLG G
Sbjct: 50 TTLAVWGNNESGQLGDG 66
Score = 48 (22.0 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 6 SIIAWGSGEDGQLGIG--NNEEREWVCVVKALE-PYKVRSVVAGSRNSLA 52
++ AWGS GQL + ++ R V+ + P ++VAG +S+A
Sbjct: 158 TVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIA 207
Score = 46 (21.3 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 3 STTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYK-------VRSVVAGSRNSLAI 53
+ + + AWGS GQ+G R+ V + P K V+ V AG +S+A+
Sbjct: 103 NVSGVRAWGSNSAGQIG------RDPATVPTSSTPVKIGGFGGAVQQVAAGGLHSMAL 154
>MGI|MGI:1344037 [details] [associations]
symbol:Rpgr "retinitis pigmentosa GTPase regulator"
species:10090 "Mus musculus" [GO:0001750 "photoreceptor outer
segment" evidence=ISO] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005929
"cilium" evidence=IDA] [GO:0007601 "visual perception"
evidence=ISO;IMP] [GO:0030030 "cell projection organization"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISO]
[GO:0042462 "eye photoreceptor cell development" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0050896 "response
to stimulus" evidence=IEA] MGI:MGI:1344037 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005794 GO:GO:0005737 GO:GO:0005813
GO:GO:0005929 GO:GO:0007601 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042073
eggNOG:COG5184 GO:GO:0036064 GO:GO:0042462
GeneTree:ENSGT00700000104160 GO:GO:0036126 CTD:6103
HOGENOM:HOG000231314 HOVERGEN:HBG026899 ChiTaRS:RPGR EMBL:AF044677
EMBL:AJ238396 EMBL:AJ318464 EMBL:AL671042 EMBL:AK017192
EMBL:BX005236 EMBL:HQ260316 IPI:IPI00122416 IPI:IPI00128188
IPI:IPI00230648 IPI:IPI00230650 RefSeq:NP_001171421.1
RefSeq:NP_035415.1 UniGene:Mm.247556 ProteinModelPortal:Q9R0X5
SMR:Q9R0X5 DIP:DIP-46319N STRING:Q9R0X5 PhosphoSite:Q9R0X5
PRIDE:Q9R0X5 Ensembl:ENSMUST00000044598 GeneID:19893 KEGG:mmu:19893
UCSC:uc009sqj.2 InParanoid:Q9R0X5 NextBio:297416 CleanEx:MM_RPGR
Genevestigator:Q9R0X5 GermOnline:ENSMUSG00000031174 Uniprot:Q9R0X5
Length = 1001
Score = 307 (113.1 bits), Expect = 5.4e-31, Sum P(2) = 5.4e-31
Identities = 93/307 (30%), Positives = 146/307 (47%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P+ + AL K+ AA G H L D G YA GGN GQ G D R I
Sbjct: 78 PTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLG----LGDTDDRDTFHQI 133
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI-----KQISVPVRVQGL 179
V P ++Q++AG S LT +G ++ WG G I + +P V
Sbjct: 134 VF---FTPADTIKQLSAGANTSAALTEDGKLFMWGDN-SEGQIGLEDKSNVCIPHEVTVG 189
Query: 180 EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLT--LVDI 237
+ + I+ G +H+ + DG L+ +G E G+LG + + P Q + G+ ++ +
Sbjct: 190 KPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSP-QRVLGIPERVIQV 248
Query: 238 AAGGWHSTALTDDGEVYGWGRGEHGRLGFGDN-DKSSKMVPQKVNLLAGEDIVQVSCGGT 296
A GG H+ LT+ VY +G G+ G+LG G ++S+ P+ + + + I +SCG
Sbjct: 249 ACGGGHTVVLTEK-VVYAFGLGQFGQLGLGTFLFETSE--PKIIERIKDQKICHISCGEN 305
Query: 297 HSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVA 356
H+ +T G +++FG G HG+LG G + T Q P + + R+ +L+A
Sbjct: 306 HTALMTELGLLYTFGDGRHGKLGLGMENFTNQFF--------PTLCSNFL--RFAVQLIA 355
Query: 357 CGGRHTL 363
CGG H L
Sbjct: 356 CGGCHML 362
Score = 289 (106.8 bits), Expect = 3.2e-24, P = 3.2e-24
Identities = 77/236 (32%), Positives = 122/236 (51%)
Query: 139 VAAGGTHSVVLTREGHVWTWGQP-WPP---GDIKQISVPVRVQGL--EQVKLIAVGAFHN 192
++ G H+ ++T ++ +G W G I P ++ L E+VKL A G H
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 99
Query: 193 LALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGL-TLVDIAAGGWHSTALTDDG 251
L + G ++A G N GQLG GDT R + + T+ ++AG S ALT+DG
Sbjct: 100 LVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDG 159
Query: 252 EVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFG 311
+++ WG G++G DKS+ +P +V + G+ I +SCG HS +T DG +++FG
Sbjct: 160 KLFMWGDNSEGQIGL--EDKSNVCIPHEVTV--GKPISWISCGYYHSAFVTMDGELYTFG 215
Query: 312 RGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
++G+LG P E+ +N +P+ G+ R I VACGG HT+ + E
Sbjct: 216 EPENGKLGL--------PNELLMNHRSPQRVL-GIPERVIQ--VACGGGHTVVLTE 260
Score = 281 (104.0 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 88/283 (31%), Positives = 135/283 (47%)
Query: 52 AICDDGKTK-TENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEP 110
A+ GKTK ENIPS+ N + + G H V + Y +G N +GQ G
Sbjct: 13 AVFTFGKTKFAENIPSKF-WFKNDIPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGS 71
Query: 111 ER---KDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI 167
+ K + L+ + V C + GG ++ EG + G
Sbjct: 72 KAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGL-GDTDDRDTF 130
Query: 168 KQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQ 227
QI V + +K ++ GA + AL EDG L+ WG+N GQ+G D + IP +
Sbjct: 131 HQI---VFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKS--NVCIPHE 185
Query: 228 GLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGED 287
G + I+ G +HS +T DGE+Y +G E+G+LG + + PQ+V L E
Sbjct: 186 VTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRV-LGIPER 244
Query: 288 IVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKV-TTGQP 329
++QV+CGG H+V LT + +++FG G G+LG G + T +P
Sbjct: 245 VIQVACGGGHTVVLT-EKVVYAFGLGQFGQLGLGTFLFETSEP 286
Score = 170 (64.9 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 71/263 (26%), Positives = 116/263 (44%)
Query: 4 TTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYK-VRSVVAGSRNSLAICDDGKTKT- 61
T + A G +GQLG+G+ ++R+ + P ++ + AG+ S A+ +DGK
Sbjct: 105 TGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMW 164
Query: 62 -ENIPSQVNALSNTKIV---QAAIG---GW------HCLAVDDQGRAYAWGGNEYGQCGE 108
+N Q+ + + + +G W H V G Y +G E G+ G
Sbjct: 165 GDNSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGL 224
Query: 109 EPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREG-HVWTWGQPWPPG-- 165
P R +R + IP+R V QVA GG H+VVLT + + + GQ G
Sbjct: 225 -PNELLMNHRSPQRVLGIPER------VIQVACGGGHTVVLTEKVVYAFGLGQFGQLGLG 277
Query: 166 -DIKQISVPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ 222
+ + S P ++ ++ K+ I+ G H + E G L+ +G+ +G+LG G +Q
Sbjct: 278 TFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQ 337
Query: 223 PIPVQGLSGLTLVD--IAAGGWH 243
P + L IA GG H
Sbjct: 338 FFPTLCSNFLRFAVQLIACGGCH 360
Score = 73 (30.8 bits), Expect = 5.4e-31, Sum P(2) = 5.4e-31
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDG 57
+ + +GS GQLG+G+ +KAL+P KV+ G ++L D G
Sbjct: 50 VTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTG 106
>UNIPROTKB|Q15751 [details] [associations]
symbol:HERC1 "Probable E3 ubiquitin-protein ligase HERC1"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005086 "ARF
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005794 GO:GO:0016020 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0005086
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:U50078 EMBL:AC073167
EMBL:AC118274 EMBL:BC040929 IPI:IPI00022479 PIR:S71752
RefSeq:NP_003913.3 UniGene:Hs.210385 HSSP:Q922Y1
ProteinModelPortal:Q15751 SMR:Q15751 IntAct:Q15751 STRING:Q15751
PhosphoSite:Q15751 DMDM:296434522 PaxDb:Q15751 PRIDE:Q15751
Ensembl:ENST00000443617 GeneID:8925 KEGG:hsa:8925 UCSC:uc002amp.3
CTD:8925 GeneCards:GC15M063900 HGNC:HGNC:4867 HPA:HPA049749
MIM:605109 neXtProt:NX_Q15751 PharmGKB:PA29242 HOGENOM:HOG000168589
HOVERGEN:HBG053919 InParanoid:Q15751 KO:K10594 OMA:HHYQDGI
OrthoDB:EOG40GCPW GenomeRNAi:8925 NextBio:33556 ArrayExpress:Q15751
Bgee:Q15751 CleanEx:HS_HERC1 Genevestigator:Q15751 Uniprot:Q15751
Length = 4861
Score = 348 (127.6 bits), Expect = 7.8e-31, Sum P(2) = 7.8e-31
Identities = 94/331 (28%), Positives = 163/331 (49%)
Query: 40 VRSVVAGSRNSLAICDDGKTKT-ENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAW 98
VR+ GS L + D T + + + + S K+ + H LA +G ++W
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHR-SIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 99 GGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTW 158
G +YG+ G ++++ + K++V V+AG HS +T +G ++TW
Sbjct: 483 GDGDYGKLGHGNSSTQKYPKLIQGPL------QGKVVVC-VSAGYRHSAAVTEDGELYTW 535
Query: 159 GQP----WPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDG-ALWAWGNNEYGQLG 213
G+ GD ++P V+ + V ++ G+ H +AL +DG +W++G + G+LG
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595
Query: 214 TGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSS 273
GDT +P ++ L G+ + + AG S ALT G+VY WG G LG G ++ ++
Sbjct: 596 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATA 653
Query: 274 KMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVP 333
+ P+ + LA IV VS G +H +AL+ D ++++G G+ G G +TG P
Sbjct: 654 -LRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN--STG-----P 705
Query: 334 INIPAPRNAGDGVDRRWIAKLVACGGRHTLA 364
I P + DG+ + ++ G H+LA
Sbjct: 706 ITKPKKVSGLDGI----AIQQISAGTSHSLA 732
Score = 334 (122.6 bits), Expect = 2.3e-29, Sum P(2) = 2.3e-29
Identities = 88/295 (29%), Positives = 153/295 (51%)
Query: 84 WHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLI-VRQVAAG 142
WH D Y WG +GQ E GR ++++P AP +QV G
Sbjct: 3991 WHLGGKCD---VYLWGAGRHGQLAE-------AGR----NVMVPA-AAPSFSQAQQVICG 4035
Query: 143 GTHSVVLTREGHVWTWGQ-------PWPPGDIKQISVPVRVQGLEQVKLI-AVGAF-HNL 193
+ V+ G V G+ D+ ++V +QG +L+ + G+ H++
Sbjct: 4036 QNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSM 4095
Query: 194 ALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEV 253
AL E G +++WG+ +YG+LG G++ + +P ++ L G +V ++ G HS +T DG++
Sbjct: 4096 ALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKL 4155
Query: 254 YGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGH-IFSFGR 312
+ +G G++GRLG G+ S+K +P++V L G I QV+CG H++A++ DG +++FG
Sbjct: 4156 FTFGNGDYGRLGLGNT--SNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGD 4213
Query: 313 GDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
GD+G+LG G P ++ + G G+ K VACG + ++A+ +
Sbjct: 4214 GDYGKLGLGNSTAKSSPQKIDVL------CGIGI------KKVACGTQFSVALTK 4256
Score = 333 (122.3 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 95/296 (32%), Positives = 151/296 (51%)
Query: 78 QAAIGGWHC-LAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIV 136
Q I G +C + G A G YG+ G+ DD +L I Q +V
Sbjct: 4030 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDL-HVLTV-ISALQGFVVTQLV 4085
Query: 137 RQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGL--EQVKLIAVGAF 190
+ G HS+ LT G V++WG G+ + P +++ L E+V ++ G
Sbjct: 4086 TSCGSDG-HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFK 4144
Query: 191 HNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDD 250
H+ + DG L+ +GN +YG+LG G+T + P V L G + +A G H+ A++ D
Sbjct: 4145 HSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4204
Query: 251 GE-VYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFS 309
G V+ +G G++G+LG G++ ++K PQK+++L G I +V+CG SVALT+DGH+++
Sbjct: 4205 GSMVWAFGDGDYGKLGLGNS--TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262
Query: 310 FGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
FG+ L GR +P ++P+ GV I + VA G HTLA+
Sbjct: 4263 FGQDRLIGLPEGRARNHNRPQQIPVLA--------GV----IIEDVAVGAEHTLAL 4306
Score = 328 (120.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 93/346 (26%), Positives = 165/346 (47%)
Query: 7 IIAWGSGEDGQLG-IGNN-----------EEREWVCVVKALEPYKVR-SVVAGSRNSLAI 53
+ WG+G GQL G N + ++ +C + +V+A S
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGR 4058
Query: 54 CDDGKTKTENIPSQVNALSN---TKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEP 110
G + ++ + ++AL T++V + H +A+ + G ++WG +YG+ G
Sbjct: 4059 LGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGN 4118
Query: 111 ERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----WPPGD 166
+ RR I +++ Q++ G HS V+T +G ++T+G G+
Sbjct: 4119 SDRQ------RRPRQIEALQGEEVV--QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170
Query: 167 IKQISVPVRVQGLE--QVKLIAVGAFHNLALQEDGAL-WAWGNNEYGQLGTGDTQPRSQP 223
+P RV LE Q+ +A G H LA+ DG++ WA+G+ +YG+LG G++ +S P
Sbjct: 4171 TSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSP 4230
Query: 224 IPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLL 283
+ L G+ + +A G S ALT DG VY +G+ +G + + PQ++ +L
Sbjct: 4231 QKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR--LIGLPEGRARNHNRPQQIPVL 4288
Query: 284 AGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQP 329
AG I V+ G H++AL +G ++++G G+LG G +P
Sbjct: 4289 AGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP 4334
Score = 306 (112.8 bits), Expect = 3.7e-25, P = 3.7e-25
Identities = 77/245 (31%), Positives = 131/245 (53%)
Query: 89 VDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTH-SV 147
V + Y WG N Q E + K ++ + AP Q G + +
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEK-----------ILQPKLAPSFSDAQTIEAGQYCTF 416
Query: 148 VLTREGHVWTWGQP----WPPGDIKQISVPVRV-----QGLEQVKLIAVGAFHNLALQED 198
V++ +G V G+ GD S ++ + +++V H LA +
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE 476
Query: 199 GALWAWGNNEYGQLGTGDTQPRSQPIPVQG-LSGLTLVDIAAGGWHSTALTDDGEVYGWG 257
G +++WG+ +YG+LG G++ + P +QG L G +V ++AG HS A+T+DGE+Y WG
Sbjct: 477 GEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 258 RGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGH-IFSFGRGDHG 316
G+ GRLG GD++ S+ +P V ++ ++ +VSCG +H++AL++DG ++SFG GD+G
Sbjct: 537 EGDFGRLGHGDSN--SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 317 RLGYG 321
+LG+G
Sbjct: 593 KLGHG 597
Score = 302 (111.4 bits), Expect = 9.8e-25, P = 9.8e-25
Identities = 88/287 (30%), Positives = 145/287 (50%)
Query: 1 MASTTS--IIAWGSGEDGQLGIGNNEEREWVCVVKA-LEPYKVRSVVAGSRNSLAICDDG 57
+A TT + +WG G+ G+LG GN+ +++ +++ L+ V V AG R+S A+ +DG
Sbjct: 471 LAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDG 530
Query: 58 KTKT----------------ENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRA-YAWGG 100
+ T NIP+ V +SN + + + G H +A+ GR +++GG
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 101 NEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG- 159
+ G+ G DT R+ + ++ + +R+V AG S+ LT G V+ WG
Sbjct: 589 GDNGKLGH-----GDTNRVYKPKVI---EALQGMFIRKVCAGSQSSLALTSTGQVYAWGC 640
Query: 160 -QPWPPGDIKQISV-PVRVQGLEQVKLI--AVGAFHNLALQEDGALWAWGNNEYGQLGTG 215
G + ++ P ++ L +++ ++G H LAL D ++AWGNN GQ G G
Sbjct: 641 GACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 216 D-TQPRSQPIPVQGLSGLTLVDIAAGGWHS---TALTDDGEVYGWGR 258
+ T P ++P V GL G+ + I+AG HS TAL D +V W R
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 747
Score = 287 (106.1 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 89/272 (32%), Positives = 136/272 (50%)
Query: 1 MASTTS--IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK 58
MA T S + +WG G+ G+LG GN++ + ++AL+ +V + G ++S + DGK
Sbjct: 4095 MALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGK 4154
Query: 59 ----------------TKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNE 102
T + +P +V AL +I Q A G H LAV G + W +
Sbjct: 4155 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG-SMVWAFGD 4213
Query: 103 YGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP- 161
G G+ + T + + I + C + +++VA G SV LT++GHV+T+GQ
Sbjct: 4214 -GDYGKLG-LGNSTAKSSPQKIDV--LCG--IGIKKVACGTQFSVALTKDGHVYTFGQDR 4267
Query: 162 ---WPPGDIKQISVPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGD 216
P G + + P ++ L V + +AVGA H LAL +G ++AWG+N GQLG G
Sbjct: 4268 LIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGH 4327
Query: 217 TQPRSQPIPVQGLSGLTLVDIAAGGWHSTALT 248
T +P V GL G + I+AG HS A T
Sbjct: 4328 TNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359
Score = 280 (103.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 92/339 (27%), Positives = 157/339 (46%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNS----LAICDDGK--- 58
S+ A G G G+LG+G++ + + + EP++ V+ S+ S LA +G+
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFS 481
Query: 59 -------------TKTENIPSQVNALSNTKIVQAAIGGW-HCLAVDDQGRAYAWGGNEYG 104
+ T+ P + K+V G+ H AV + G Y WG ++G
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 105 QCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGH-VWTWGQ--- 160
+ G D R IP V +V+ G +H++ L+++G VW++G
Sbjct: 542 RLGHG----DSNSRN------IPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDN 591
Query: 161 -PWPPGDIKQISVPVRVQGLEQ--VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDT 217
GD ++ P ++ L+ ++ + G+ +LAL G ++AWG LG G +
Sbjct: 592 GKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCGSS 649
Query: 218 QPRS-QPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMV 276
+ + +P ++ L+ +VD++ G H AL+ D EVY WG G+ G G N
Sbjct: 650 EATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITK 708
Query: 277 PQKVNLLAGEDIVQVSCGGTHSVALT---RDGHIFSFGR 312
P+KV+ L G I Q+S G +HS+A T RD + ++ R
Sbjct: 709 PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 747
Score = 254 (94.5 bits), Expect = 3.9e-21, Sum P(2) = 3.9e-21
Identities = 70/255 (27%), Positives = 121/255 (47%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDT 116
G + + P Q+ AL ++VQ + G H V G+ + +G +YG+ G
Sbjct: 4117 GNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLG--------L 4168
Query: 117 GRILRRDIVIPQRCAPK--LIVRQVAAGGTHSVVLTREGH-VWTWGQ----PWPPGDIKQ 169
G + + P+R + QVA G H++ ++ +G VW +G G+
Sbjct: 4169 GNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4226
Query: 170 ISVPVRVQGL--EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQ 227
S P ++ L +K +A G ++AL +DG ++ +G + L G + ++P +
Sbjct: 4227 KSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIP 4286
Query: 228 GLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGED 287
L+G+ + D+A G H+ AL +G+VY WG G+LG G + + P V L G++
Sbjct: 4287 VLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE--PTLVTGLQGKN 4344
Query: 288 IVQVSCGGTHSVALT 302
+ Q+S G HS A T
Sbjct: 4345 VRQISAGRCHSAAWT 4359
Score = 252 (93.8 bits), Expect = 6.3e-18, P = 6.3e-18
Identities = 65/226 (28%), Positives = 110/226 (48%)
Query: 148 VLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWA 203
+++ V+ WG G ++I P + I G + + DG++ A
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRA 426
Query: 204 WGNNEYGQLGTGDTQPRS--QPIPVQGLSGLTLVDIAAGG-WHSTALTDDGEVYGWGRGE 260
G YG+LG GD+ +S + + + + V + G H+ A T +GEV+ WG G+
Sbjct: 427 CGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 261 HGRLGFGDNDKSSKMVPQKVN-LLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLG 319
+G+LG G++ S++ P+ + L G+ +V VS G HS A+T DG ++++G GD GRLG
Sbjct: 487 YGKLGHGNS--STQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 320 YGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
+G +P + N G+ V+CG HT+A+
Sbjct: 545 HG----DSNSRNIPTLVKDISNVGE----------VSCGSSHTIAL 576
Score = 190 (71.9 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 53/177 (29%), Positives = 90/177 (50%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKT------ 59
++ ++G G++G+LG G+ V++AL+ +R V AGS++SLA+ G+
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 60 ---------KTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEP 110
T P + L+ T+IV +IG HCLA+ YAWG N GQCG+
Sbjct: 642 ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700
Query: 111 ERKDDTGRILRRDIVIPQRCA--PKLIVRQVAAGGTHSVVLT---REGHVWTWGQPW 162
+ TG I + P++ + + ++Q++AG +HS+ T R+ V W +P+
Sbjct: 701 ---NSTGPITK-----PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHRPY 749
Score = 182 (69.1 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 52/176 (29%), Positives = 85/176 (48%)
Query: 195 LQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVY 254
+ E ++ WG+N QL G + QP S ++ AG + + ++ DG V
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIE--AGQYCTFVISTDGSVR 425
Query: 255 GWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCG-GT--HSVALTRDGHIFSFG 311
G+G +GRLG GD++ S + +K+ I +VS G+ H++A T +G +FS+G
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTL--KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483
Query: 312 RGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
GD+G+LG+G T + P I P + V+ G RH+ A+ E
Sbjct: 484 DGDYGKLGHGNSST----QKYPKLIQGPLQGK-------VVVCVSAGYRHSAAVTE 528
Score = 76 (31.8 bits), Expect = 3.9e-21, Sum P(2) = 3.9e-21
Identities = 18/56 (32%), Positives = 35/56 (62%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVA--GSR-NSLAICDDGK 58
+++A G G G+LG GN+++ + V+ AL+ + V +V GS +S+A+ + G+
Sbjct: 4047 TVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE 4102
Score = 47 (21.6 bits), Expect = 7.8e-31, Sum P(2) = 7.8e-31
Identities = 14/61 (22%), Positives = 25/61 (40%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYK-VRSVVAGSRNSLAICDDGKT 59
++ T + WGS QL G E+ + K + +++ AG + I DG
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEK---ILQPKLAPSFSDAQTIEAGQYCTFVISTDGSV 424
Query: 60 K 60
+
Sbjct: 425 R 425
Score = 45 (20.9 bits), Expect = 3.7e-29, Sum P(2) = 3.7e-29
Identities = 25/99 (25%), Positives = 40/99 (40%)
Query: 12 SGEDGQLGIGNNEEREW----VCVVKALEPYKVRSVVAGSRNSLAICD---DGKTKTENI 64
SG DG + + N ++++ CV LE S+ + S S + GK +
Sbjct: 3446 SGNDGTIRVWNVTKKQYSLQQTCVFNRLEGDAEESLGSPSDPSFSPVSWSISGKYLAGAL 3505
Query: 65 PSQVNA--LSNTKIVQAAIGGW-HCLAVDDQGRAYAWGG 100
VN ++ K + W LA ++G A AW G
Sbjct: 3506 EKMVNIWQVNGGKGLVDIQPHWVSALAWPEEGPATAWSG 3544
Score = 45 (20.9 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 168 KQIS-VPVRVQGLEQVKLIAVGAFHNLALQEDGAL 201
KQ+ VP+ ++ LE+V L+ V +++ ED +
Sbjct: 4606 KQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDSGI 4640
>UNIPROTKB|F1MNS0 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:DAAA02028744
EMBL:DAAA02028745 EMBL:DAAA02028746 IPI:IPI00924381
Ensembl:ENSBTAT00000061038 ArrayExpress:F1MNS0 Uniprot:F1MNS0
Length = 4857
Score = 347 (127.2 bits), Expect = 9.9e-31, Sum P(2) = 9.9e-31
Identities = 93/331 (28%), Positives = 163/331 (49%)
Query: 40 VRSVVAGSRNSLAICDDGKTKT-ENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAW 98
VR+ GS L + D T + + + + S K+ + H LA +G ++W
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHR-SIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 99 GGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTW 158
G +YG+ G ++++ + K++V V+AG HS +T +G ++TW
Sbjct: 483 GDGDYGKLGHGNSSTQKYPKLIQGPL------QGKVVVC-VSAGYRHSAAVTEDGELYTW 535
Query: 159 GQP----WPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDG-ALWAWGNNEYGQLG 213
G+ GD ++P V+ + V ++ G+ H +AL +DG +W++G + G+LG
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595
Query: 214 TGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSS 273
GDT +P ++ L G+ + + AG S ALT G+VY WG G LG G ++ ++
Sbjct: 596 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATA 653
Query: 274 KMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVP 333
+ P+ + LA IV +S G +H +AL+ D ++++G G+ G G +TG P
Sbjct: 654 -LRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN--STG-----P 705
Query: 334 INIPAPRNAGDGVDRRWIAKLVACGGRHTLA 364
I P + DG+ + ++ G H+LA
Sbjct: 706 ITKPKKVSGLDGI----AIQQISAGTSHSLA 732
Score = 335 (123.0 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 89/295 (30%), Positives = 153/295 (51%)
Query: 84 WHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLI-VRQVAAG 142
WH D Y WG +GQ E GR ++++P AP +QV G
Sbjct: 3986 WHLGGKCD---VYLWGAGRHGQLAE-------AGR----NVMVPA-AAPSFSQAQQVICG 4030
Query: 143 GTHSVVLTREGHVWTWGQ-------PWPPGDIKQISVPVRVQGLEQVKLI-AVGAF-HNL 193
+ V+ G V G+ D+ ++V +QG +L+ + G+ H++
Sbjct: 4031 QNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSM 4090
Query: 194 ALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEV 253
AL E G +++WG+ +YG+LG G++ + +P ++ L G +V ++ G HS +T DG++
Sbjct: 4091 ALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKL 4150
Query: 254 YGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGH-IFSFGR 312
+ +G G++GRLG G+ S+K +P++V L G I QV+CG H++A++ DG +++FG
Sbjct: 4151 FTFGNGDYGRLGLGNT--SNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGD 4208
Query: 313 GDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
GD+G+LG G P +V + G G+ K VACG + ++A+ +
Sbjct: 4209 GDYGKLGLGNSTAKSSPQKVDVL------CGIGI------KKVACGTQFSVALTK 4251
Score = 333 (122.3 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 95/296 (32%), Positives = 151/296 (51%)
Query: 78 QAAIGGWHC-LAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIV 136
Q I G +C + G A G YG+ G+ DD +L I Q +V
Sbjct: 4025 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDL-HVLTV-ISALQGFVVTQLV 4080
Query: 137 RQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGL--EQVKLIAVGAF 190
+ G HS+ LT G V++WG G+ + P +++ L E+V ++ G
Sbjct: 4081 TSCGSDG-HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFK 4139
Query: 191 HNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDD 250
H+ + DG L+ +GN +YG+LG G+T + P V L G + +A G H+ A++ D
Sbjct: 4140 HSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4199
Query: 251 GE-VYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFS 309
G V+ +G G++G+LG G++ ++K PQKV++L G I +V+CG SVALT+DGH+++
Sbjct: 4200 GSMVWAFGDGDYGKLGLGNS--TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4257
Query: 310 FGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
FG+ L GR +P ++P+ GV + + VA G HTLA+
Sbjct: 4258 FGQDRLIGLPEGRARNHNRPQQIPVLA--------GV----VIEDVAVGAEHTLAL 4301
Score = 329 (120.9 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 95/351 (27%), Positives = 166/351 (47%)
Query: 7 IIAWGSGEDGQLG-IGNN-----------EEREWVCVVKALEPYKVR-SVVAGSRNSLAI 53
+ WG+G GQL G N + ++ +C + +V+A S
Sbjct: 3994 VYLWGAGRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGR 4053
Query: 54 CDDGKTKTENIPSQVNALSN---TKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEP 110
G + ++ + ++AL T++V + H +A+ + G ++WG +YG+ G
Sbjct: 4054 LGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGN 4113
Query: 111 ERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----WPPGD 166
+ RR I +++ Q++ G HS V+T +G ++T+G G+
Sbjct: 4114 SDRQ------RRPRQIEALQGEEVV--QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4165
Query: 167 IKQISVPVRVQGLE--QVKLIAVGAFHNLALQEDGAL-WAWGNNEYGQLGTGDTQPRSQP 223
+P RV LE Q+ +A G H LA+ DG++ WA+G+ +YG+LG G++ +S P
Sbjct: 4166 TSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSP 4225
Query: 224 IPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLL 283
V L G+ + +A G S ALT DG VY +G+ +G + + PQ++ +L
Sbjct: 4226 QKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR--LIGLPEGRARNHNRPQQIPVL 4283
Query: 284 AGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPI 334
AG I V+ G H++AL G ++++G G+LG G +P V +
Sbjct: 4284 AGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4334
Score = 306 (112.8 bits), Expect = 3.7e-25, P = 3.7e-25
Identities = 77/245 (31%), Positives = 131/245 (53%)
Query: 89 VDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTH-SV 147
V + Y WG N Q E + K ++ + AP Q G + +
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEK-----------ILQPKLAPSFSDAQTIEAGQYCTF 416
Query: 148 VLTREGHVWTWGQP----WPPGDIKQISVPVRV-----QGLEQVKLIAVGAFHNLALQED 198
V++ +G V G+ GD S ++ + +++V H LA +
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE 476
Query: 199 GALWAWGNNEYGQLGTGDTQPRSQPIPVQG-LSGLTLVDIAAGGWHSTALTDDGEVYGWG 257
G +++WG+ +YG+LG G++ + P +QG L G +V ++AG HS A+T+DGE+Y WG
Sbjct: 477 GEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 258 RGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGH-IFSFGRGDHG 316
G+ GRLG GD++ S+ +P V ++ ++ +VSCG +H++AL++DG ++SFG GD+G
Sbjct: 537 EGDFGRLGHGDSN--SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 317 RLGYG 321
+LG+G
Sbjct: 593 KLGHG 597
Score = 303 (111.7 bits), Expect = 7.7e-25, P = 7.7e-25
Identities = 89/287 (31%), Positives = 145/287 (50%)
Query: 1 MASTTS--IIAWGSGEDGQLGIGNNEEREWVCVVKA-LEPYKVRSVVAGSRNSLAICDDG 57
+A TT + +WG G+ G+LG GN+ +++ +++ L+ V V AG R+S A+ +DG
Sbjct: 471 LAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDG 530
Query: 58 KTKT----------------ENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRA-YAWGG 100
+ T NIP+ V +SN + + + G H +A+ GR +++GG
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 101 NEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG- 159
+ G+ G DT R+ + ++ + +R+V AG S+ LT G V+ WG
Sbjct: 589 GDNGKLGH-----GDTNRVYKPKVI---EALQGMFIRKVCAGSQSSLALTSTGQVYAWGC 640
Query: 160 -QPWPPGDIKQISV-PVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTG 215
G + ++ P ++ L ++ I++G H LAL D ++AWGNN GQ G G
Sbjct: 641 GACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 216 D-TQPRSQPIPVQGLSGLTLVDIAAGGWHS---TALTDDGEVYGWGR 258
+ T P ++P V GL G+ + I+AG HS TAL D +V W R
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 747
Score = 281 (104.0 bits), Expect = 1.7e-22, P = 1.7e-22
Identities = 93/339 (27%), Positives = 157/339 (46%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNS----LAICDDGK--- 58
S+ A G G G+LG+G++ + + + EP++ V+ S+ S LA +G+
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFS 481
Query: 59 -------------TKTENIPSQVNALSNTKIVQAAIGGW-HCLAVDDQGRAYAWGGNEYG 104
+ T+ P + K+V G+ H AV + G Y WG ++G
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 105 QCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGH-VWTWGQ--- 160
+ G D R IP V +V+ G +H++ L+++G VW++G
Sbjct: 542 RLGHG----DSNSRN------IPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDN 591
Query: 161 -PWPPGDIKQISVPVRVQGLEQ--VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDT 217
GD ++ P ++ L+ ++ + G+ +LAL G ++AWG LG G +
Sbjct: 592 GKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCGSS 649
Query: 218 QPRS-QPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMV 276
+ + +P ++ L+ +VDI+ G H AL+ D EVY WG G+ G G N
Sbjct: 650 EATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITK 708
Query: 277 PQKVNLLAGEDIVQVSCGGTHSVALT---RDGHIFSFGR 312
P+KV+ L G I Q+S G +HS+A T RD + ++ R
Sbjct: 709 PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 747
Score = 276 (102.2 bits), Expect = 5.6e-22, P = 5.6e-22
Identities = 87/272 (31%), Positives = 134/272 (49%)
Query: 1 MASTTS--IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK 58
MA T S + +WG G+ G+LG GN++ + ++AL+ +V + G ++S + DGK
Sbjct: 4090 MALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGK 4149
Query: 59 ----------------TKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNE 102
T + +P +V AL +I Q A G H LAV G + W +
Sbjct: 4150 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG-SMVWAFGD 4208
Query: 103 YGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP- 161
G G+ + T + + + + C + +++VA G SV LT++GHV+T+GQ
Sbjct: 4209 -GDYGKLG-LGNSTAKSSPQKVDV--LCG--IGIKKVACGTQFSVALTKDGHVYTFGQDR 4262
Query: 162 ---WPPGDIKQISVPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGD 216
P G + + P ++ L V + +AVGA H LAL G ++AWG+N GQLG G
Sbjct: 4263 LIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGH 4322
Query: 217 TQPRSQPIPVQGLSGLTLVDIAAGGWHSTALT 248
T +P V L G + I+AG HS A T
Sbjct: 4323 TNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4354
Score = 259 (96.2 bits), Expect = 6.9e-22, Sum P(2) = 6.9e-22
Identities = 71/255 (27%), Positives = 121/255 (47%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDT 116
G + + P Q+ AL ++VQ + G H V G+ + +G +YG+ G
Sbjct: 4112 GNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLG--------L 4163
Query: 117 GRILRRDIVIPQRCAPK--LIVRQVAAGGTHSVVLTREGH-VWTWGQ----PWPPGDIKQ 169
G + + P+R + QVA G H++ ++ +G VW +G G+
Sbjct: 4164 GNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4221
Query: 170 ISVPVRVQGL--EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQ 227
S P +V L +K +A G ++AL +DG ++ +G + L G + ++P +
Sbjct: 4222 KSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIP 4281
Query: 228 GLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGED 287
L+G+ + D+A G H+ AL G+VY WG G+LG G + + P V +L G++
Sbjct: 4282 VLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE--PTLVTVLQGKN 4339
Query: 288 IVQVSCGGTHSVALT 302
+ Q+S G HS A T
Sbjct: 4340 VRQISAGRCHSAAWT 4354
Score = 257 (95.5 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 69/233 (29%), Positives = 112/233 (48%)
Query: 139 VAAGGTHSVVLTREGHVW--TWGQPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQ 196
+ G T V T E +VW G ++I P + I G + +
Sbjct: 360 IQTGDTPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVIS 419
Query: 197 EDGALWAWGNNEYGQLGTGDTQPRS--QPIPVQGLSGLTLVDIAAGG-WHSTALTDDGEV 253
DG++ A G YG+LG GD+ +S + + + + V + G H+ A T +GEV
Sbjct: 420 TDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEV 479
Query: 254 YGWGRGEHGRLGFGDNDKSSKMVPQKVN-LLAGEDIVQVSCGGTHSVALTRDGHIFSFGR 312
+ WG G++G+LG G++ S++ P+ + L G+ +V VS G HS A+T DG ++++G
Sbjct: 480 FSWGDGDYGKLGHGNS--STQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGE 537
Query: 313 GDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
GD GRLG+G +P + N G+ V+CG HT+A+
Sbjct: 538 GDFGRLGHG----DSNSRNIPTLVKDISNVGE----------VSCGSSHTIAL 576
Score = 189 (71.6 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 53/177 (29%), Positives = 90/177 (50%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKT------ 59
++ ++G G++G+LG G+ V++AL+ +R V AGS++SLA+ G+
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 60 ---------KTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEP 110
T P + L+ T+IV +IG HCLA+ YAWG N GQCG+
Sbjct: 642 ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700
Query: 111 ERKDDTGRILRRDIVIPQRCA--PKLIVRQVAAGGTHSVVLT---REGHVWTWGQPW 162
+ TG I + P++ + + ++Q++AG +HS+ T R+ V W +P+
Sbjct: 701 ---NSTGPITK-----PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHRPY 749
Score = 182 (69.1 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 52/176 (29%), Positives = 85/176 (48%)
Query: 195 LQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVY 254
+ E ++ WG+N QL G + QP S ++ AG + + ++ DG V
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIE--AGQYCTFVISTDGSVR 425
Query: 255 GWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCG-GT--HSVALTRDGHIFSFG 311
G+G +GRLG GD++ S + +K+ I +VS G+ H++A T +G +FS+G
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTL--KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483
Query: 312 RGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
GD+G+LG+G T + P I P + V+ G RH+ A+ E
Sbjct: 484 DGDYGKLGHGNSST----QKYPKLIQGPLQGK-------VVVCVSAGYRHSAAVTE 528
Score = 76 (31.8 bits), Expect = 6.9e-22, Sum P(2) = 6.9e-22
Identities = 18/56 (32%), Positives = 35/56 (62%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVA--GSR-NSLAICDDGK 58
+++A G G G+LG GN+++ + V+ AL+ + V +V GS +S+A+ + G+
Sbjct: 4042 TVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE 4097
Score = 47 (21.6 bits), Expect = 9.9e-31, Sum P(2) = 9.9e-31
Identities = 14/61 (22%), Positives = 25/61 (40%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYK-VRSVVAGSRNSLAICDDGKT 59
++ T + WGS QL G E+ + K + +++ AG + I DG
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEK---ILQPKLAPSFSDAQTIEAGQYCTFVISTDGSV 424
Query: 60 K 60
+
Sbjct: 425 R 425
Score = 45 (20.9 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 168 KQIS-VPVRVQGLEQVKLIAVGAFHNLALQEDGAL 201
KQ+ VP+ ++ LE+V L+ V +++ ED +
Sbjct: 4601 KQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDSGI 4635
>UNIPROTKB|F1S098 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
CTD:8925 KO:K10594 OMA:HHYQDGI GeneTree:ENSGT00700000104312
EMBL:CU550694 EMBL:CU582937 RefSeq:XP_001927286.4 UniGene:Ssc.96208
UniGene:Ssc.97542 Ensembl:ENSSSCT00000005038 GeneID:100153537
KEGG:ssc:100153537 Uniprot:F1S098
Length = 4859
Score = 347 (127.2 bits), Expect = 9.9e-31, Sum P(2) = 9.9e-31
Identities = 93/331 (28%), Positives = 163/331 (49%)
Query: 40 VRSVVAGSRNSLAICDDGKTKT-ENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAW 98
VR+ GS L + D T + + + + S K+ + H LA +G ++W
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHR-SIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 99 GGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTW 158
G +YG+ G ++++ + K++V V+AG HS +T +G ++TW
Sbjct: 483 GDGDYGKLGHGNSSTQKYPKLIQGPL------QGKVVVC-VSAGYRHSAAVTEDGELYTW 535
Query: 159 GQP----WPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDG-ALWAWGNNEYGQLG 213
G+ GD ++P V+ + V ++ G+ H +AL +DG +W++G + G+LG
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595
Query: 214 TGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSS 273
GDT +P ++ L G+ + + AG S ALT G+VY WG G LG G ++ ++
Sbjct: 596 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATA 653
Query: 274 KMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVP 333
+ P+ + LA IV +S G +H +AL+ D ++++G G+ G G +TG P
Sbjct: 654 -LRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN--STG-----P 705
Query: 334 INIPAPRNAGDGVDRRWIAKLVACGGRHTLA 364
I P + DG+ + ++ G H+LA
Sbjct: 706 ITKPKKVSGLDGI----AIQQISAGTSHSLA 732
Score = 335 (123.0 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 89/295 (30%), Positives = 153/295 (51%)
Query: 84 WHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLI-VRQVAAG 142
WH D Y WG +GQ E GR ++++P AP +QV G
Sbjct: 3989 WHLGGKCD---VYLWGAGRHGQLAE-------AGR----NVMVPA-AAPSFSQAQQVICG 4033
Query: 143 GTHSVVLTREGHVWTWGQ-------PWPPGDIKQISVPVRVQGLEQVKLI-AVGAF-HNL 193
+ V+ G V G+ D+ ++V +QG +L+ + G+ H++
Sbjct: 4034 QNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSM 4093
Query: 194 ALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEV 253
AL E G +++WG+ +YG+LG G++ + +P ++ L G +V ++ G HS +T DG++
Sbjct: 4094 ALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKL 4153
Query: 254 YGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGH-IFSFGR 312
+ +G G++GRLG G+ S+K +P++V L G I QV+CG H++A++ DG +++FG
Sbjct: 4154 FTFGNGDYGRLGLGNT--SNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGD 4211
Query: 313 GDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
GD+G+LG G P +V + G G+ K VACG + ++A+ +
Sbjct: 4212 GDYGKLGLGNSTAKSSPQKVDVL------CGIGI------KKVACGTQFSVALTK 4254
Score = 333 (122.3 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 95/296 (32%), Positives = 151/296 (51%)
Query: 78 QAAIGGWHC-LAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIV 136
Q I G +C + G A G YG+ G+ DD +L I Q +V
Sbjct: 4028 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDL-HVLTV-ISALQGFVVTQLV 4083
Query: 137 RQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGL--EQVKLIAVGAF 190
+ G HS+ LT G V++WG G+ + P +++ L E+V ++ G
Sbjct: 4084 TSCGSDG-HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFK 4142
Query: 191 HNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDD 250
H+ + DG L+ +GN +YG+LG G+T + P V L G + +A G H+ A++ D
Sbjct: 4143 HSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4202
Query: 251 GE-VYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFS 309
G V+ +G G++G+LG G++ ++K PQKV++L G I +V+CG SVALT+DGH+++
Sbjct: 4203 GSMVWAFGDGDYGKLGLGNS--TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4260
Query: 310 FGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
FG+ L GR +P ++P+ GV + + VA G HTLA+
Sbjct: 4261 FGQDRLIGLPEGRARNHNRPQQIPVLA--------GV----VIEDVAVGAEHTLAL 4304
Score = 329 (120.9 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 95/351 (27%), Positives = 166/351 (47%)
Query: 7 IIAWGSGEDGQLG-IGNN-----------EEREWVCVVKALEPYKVR-SVVAGSRNSLAI 53
+ WG+G GQL G N + ++ +C + +V+A S
Sbjct: 3997 VYLWGAGRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGR 4056
Query: 54 CDDGKTKTENIPSQVNALSN---TKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEP 110
G + ++ + ++AL T++V + H +A+ + G ++WG +YG+ G
Sbjct: 4057 LGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGN 4116
Query: 111 ERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----WPPGD 166
+ RR I +++ Q++ G HS V+T +G ++T+G G+
Sbjct: 4117 SDRQ------RRPRQIEALQGEEVV--QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4168
Query: 167 IKQISVPVRVQGLE--QVKLIAVGAFHNLALQEDGAL-WAWGNNEYGQLGTGDTQPRSQP 223
+P RV LE Q+ +A G H LA+ DG++ WA+G+ +YG+LG G++ +S P
Sbjct: 4169 TSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSP 4228
Query: 224 IPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLL 283
V L G+ + +A G S ALT DG VY +G+ +G + + PQ++ +L
Sbjct: 4229 QKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR--LIGLPEGRARNHNRPQQIPVL 4286
Query: 284 AGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPI 334
AG I V+ G H++AL G ++++G G+LG G +P V +
Sbjct: 4287 AGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4337
Score = 306 (112.8 bits), Expect = 3.7e-25, P = 3.7e-25
Identities = 77/245 (31%), Positives = 131/245 (53%)
Query: 89 VDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTH-SV 147
V + Y WG N Q E + K ++ + AP Q G + +
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEK-----------ILQPKLAPSFSDAQTIEAGQYCTF 416
Query: 148 VLTREGHVWTWGQP----WPPGDIKQISVPVRV-----QGLEQVKLIAVGAFHNLALQED 198
V++ +G V G+ GD S ++ + +++V H LA +
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE 476
Query: 199 GALWAWGNNEYGQLGTGDTQPRSQPIPVQG-LSGLTLVDIAAGGWHSTALTDDGEVYGWG 257
G +++WG+ +YG+LG G++ + P +QG L G +V ++AG HS A+T+DGE+Y WG
Sbjct: 477 GEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 258 RGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGH-IFSFGRGDHG 316
G+ GRLG GD++ S+ +P V ++ ++ +VSCG +H++AL++DG ++SFG GD+G
Sbjct: 537 EGDFGRLGHGDSN--SRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 317 RLGYG 321
+LG+G
Sbjct: 593 KLGHG 597
Score = 303 (111.7 bits), Expect = 7.7e-25, P = 7.7e-25
Identities = 89/287 (31%), Positives = 145/287 (50%)
Query: 1 MASTTS--IIAWGSGEDGQLGIGNNEEREWVCVVKA-LEPYKVRSVVAGSRNSLAICDDG 57
+A TT + +WG G+ G+LG GN+ +++ +++ L+ V V AG R+S A+ +DG
Sbjct: 471 LAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDG 530
Query: 58 KTKT----------------ENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRA-YAWGG 100
+ T NIP+ V +SN + + + G H +A+ GR +++GG
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 101 NEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG- 159
+ G+ G DT R+ + ++ + +R+V AG S+ LT G V+ WG
Sbjct: 589 GDNGKLGH-----GDTNRVYKPKVI---EALQGMFIRKVCAGSQSSLALTSTGQVYAWGC 640
Query: 160 -QPWPPGDIKQISV-PVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTG 215
G + ++ P ++ L ++ I++G H LAL D ++AWGNN GQ G G
Sbjct: 641 GACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 216 D-TQPRSQPIPVQGLSGLTLVDIAAGGWHS---TALTDDGEVYGWGR 258
+ T P ++P V GL G+ + I+AG HS TAL D +V W R
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 747
Score = 281 (104.0 bits), Expect = 1.7e-22, P = 1.7e-22
Identities = 93/339 (27%), Positives = 157/339 (46%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNS----LAICDDGK--- 58
S+ A G G G+LG+G++ + + + EP++ V+ S+ S LA +G+
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFS 481
Query: 59 -------------TKTENIPSQVNALSNTKIVQAAIGGW-HCLAVDDQGRAYAWGGNEYG 104
+ T+ P + K+V G+ H AV + G Y WG ++G
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 105 QCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGH-VWTWGQ--- 160
+ G D R IP V +V+ G +H++ L+++G VW++G
Sbjct: 542 RLGHG----DSNSRN------IPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDN 591
Query: 161 -PWPPGDIKQISVPVRVQGLEQ--VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDT 217
GD ++ P ++ L+ ++ + G+ +LAL G ++AWG LG G +
Sbjct: 592 GKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCGSS 649
Query: 218 QPRS-QPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMV 276
+ + +P ++ L+ +VDI+ G H AL+ D EVY WG G+ G G N
Sbjct: 650 EATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITK 708
Query: 277 PQKVNLLAGEDIVQVSCGGTHSVALT---RDGHIFSFGR 312
P+KV+ L G I Q+S G +HS+A T RD + ++ R
Sbjct: 709 PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 747
Score = 276 (102.2 bits), Expect = 5.6e-22, P = 5.6e-22
Identities = 87/272 (31%), Positives = 134/272 (49%)
Query: 1 MASTTS--IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK 58
MA T S + +WG G+ G+LG GN++ + ++AL+ +V + G ++S + DGK
Sbjct: 4093 MALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGK 4152
Query: 59 ----------------TKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNE 102
T + +P +V AL +I Q A G H LAV G + W +
Sbjct: 4153 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG-SMVWAFGD 4211
Query: 103 YGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP- 161
G G+ + T + + + + C + +++VA G SV LT++GHV+T+GQ
Sbjct: 4212 -GDYGKLG-LGNSTAKSSPQKVDV--LCG--IGIKKVACGTQFSVALTKDGHVYTFGQDR 4265
Query: 162 ---WPPGDIKQISVPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGD 216
P G + + P ++ L V + +AVGA H LAL G ++AWG+N GQLG G
Sbjct: 4266 LIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGH 4325
Query: 217 TQPRSQPIPVQGLSGLTLVDIAAGGWHSTALT 248
T +P V L G + I+AG HS A T
Sbjct: 4326 TNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4357
Score = 259 (96.2 bits), Expect = 6.9e-22, Sum P(2) = 6.9e-22
Identities = 71/255 (27%), Positives = 121/255 (47%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDT 116
G + + P Q+ AL ++VQ + G H V G+ + +G +YG+ G
Sbjct: 4115 GNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLG--------L 4166
Query: 117 GRILRRDIVIPQRCAPK--LIVRQVAAGGTHSVVLTREGH-VWTWGQ----PWPPGDIKQ 169
G + + P+R + QVA G H++ ++ +G VW +G G+
Sbjct: 4167 GNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4224
Query: 170 ISVPVRVQGL--EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQ 227
S P +V L +K +A G ++AL +DG ++ +G + L G + ++P +
Sbjct: 4225 KSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIP 4284
Query: 228 GLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGED 287
L+G+ + D+A G H+ AL G+VY WG G+LG G + + P V +L G++
Sbjct: 4285 VLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE--PTLVTVLQGKN 4342
Query: 288 IVQVSCGGTHSVALT 302
+ Q+S G HS A T
Sbjct: 4343 VRQISAGRCHSAAWT 4357
Score = 252 (93.8 bits), Expect = 6.3e-18, P = 6.3e-18
Identities = 65/226 (28%), Positives = 110/226 (48%)
Query: 148 VLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWA 203
+++ V+ WG G ++I P + I G + + DG++ A
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRA 426
Query: 204 WGNNEYGQLGTGDTQPRS--QPIPVQGLSGLTLVDIAAGG-WHSTALTDDGEVYGWGRGE 260
G YG+LG GD+ +S + + + + V + G H+ A T +GEV+ WG G+
Sbjct: 427 CGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 261 HGRLGFGDNDKSSKMVPQKVN-LLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLG 319
+G+LG G++ S++ P+ + L G+ +V VS G HS A+T DG ++++G GD GRLG
Sbjct: 487 YGKLGHGNS--STQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 320 YGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
+G +P + N G+ V+CG HT+A+
Sbjct: 545 HG----DSNSRNIPTLVKDISNVGE----------VSCGSSHTIAL 576
Score = 189 (71.6 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 53/177 (29%), Positives = 90/177 (50%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKT------ 59
++ ++G G++G+LG G+ V++AL+ +R V AGS++SLA+ G+
Sbjct: 582 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 641
Query: 60 ---------KTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEP 110
T P + L+ T+IV +IG HCLA+ YAWG N GQCG+
Sbjct: 642 ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700
Query: 111 ERKDDTGRILRRDIVIPQRCA--PKLIVRQVAAGGTHSVVLT---REGHVWTWGQPW 162
+ TG I + P++ + + ++Q++AG +HS+ T R+ V W +P+
Sbjct: 701 ---NSTGPITK-----PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHRPY 749
Score = 182 (69.1 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 52/176 (29%), Positives = 85/176 (48%)
Query: 195 LQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVY 254
+ E ++ WG+N QL G + QP S ++ AG + + ++ DG V
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIE--AGQYCTFVISTDGSVR 425
Query: 255 GWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCG-GT--HSVALTRDGHIFSFG 311
G+G +GRLG GD++ S + +K+ I +VS G+ H++A T +G +FS+G
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTL--KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483
Query: 312 RGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
GD+G+LG+G T + P I P + V+ G RH+ A+ E
Sbjct: 484 DGDYGKLGHGNSST----QKYPKLIQGPLQGK-------VVVCVSAGYRHSAAVTE 528
Score = 76 (31.8 bits), Expect = 6.9e-22, Sum P(2) = 6.9e-22
Identities = 18/56 (32%), Positives = 35/56 (62%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVA--GSR-NSLAICDDGK 58
+++A G G G+LG GN+++ + V+ AL+ + V +V GS +S+A+ + G+
Sbjct: 4045 TVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE 4100
Score = 47 (21.6 bits), Expect = 9.9e-31, Sum P(2) = 9.9e-31
Identities = 14/61 (22%), Positives = 25/61 (40%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYK-VRSVVAGSRNSLAICDDGKT 59
++ T + WGS QL G E+ + K + +++ AG + I DG
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEK---ILQPKLAPSFSDAQTIEAGQYCTFVISTDGSV 424
Query: 60 K 60
+
Sbjct: 425 R 425
Score = 45 (20.9 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 168 KQIS-VPVRVQGLEQVKLIAVGAFHNLALQEDGAL 201
KQ+ VP+ ++ LE+V L+ V +++ ED +
Sbjct: 4604 KQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDSGI 4638
>TAIR|locus:2092190 [details] [associations]
symbol:AT3G26100 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686
EMBL:AB023041 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 HSSP:P18754
EMBL:AK230272 IPI:IPI00540426 RefSeq:NP_974362.1 UniGene:At.25510
UniGene:At.69016 ProteinModelPortal:Q9LU80 SMR:Q9LU80 STRING:Q9LU80
PRIDE:Q9LU80 EnsemblPlants:AT3G26100.2 GeneID:822208
KEGG:ath:AT3G26100 TAIR:At3g26100 HOGENOM:HOG000070923
InParanoid:Q9LU80 OMA:LACQPNG PhylomeDB:Q9LU80
ProtClustDB:CLSN2688790 Genevestigator:Q9LU80 Uniprot:Q9LU80
Length = 532
Score = 281 (104.0 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 92/286 (32%), Positives = 142/286 (49%)
Query: 59 TKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWG-GNEYGQCGEEPERKDDTG 117
TK P V +L N +VQAAIG + + +G+ Y + GN+ G+ G + E D
Sbjct: 234 TKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGND-GRLGHQTEAAD--- 289
Query: 118 RILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGH---VWT----WGQPWPPG---DI 167
+ R ++ P P V Q+AAG + + L + + V++ G G D
Sbjct: 290 -VEPRPLLGPLENVP---VVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDE 345
Query: 168 KQISVPVRVQGLE-QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPV 226
K V + Q L Q +++A GA+H + +DG + WG YG LG G+ + S P V
Sbjct: 346 KYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 405
Query: 227 QGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLG----FGD--NDKSSKMVPQKV 280
+GLS + V +A G + + ++DDG+VY +G GE LG F + N ++ + P V
Sbjct: 406 EGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQGNRHANVLSPTVV 465
Query: 281 NLL--AGEDIVQVSCGGT-----HSVALTRDGHIFSFGRGDHGRLG 319
L E +VQ+S + H+ ALT G +F+FG GD G+LG
Sbjct: 466 TSLKQVNERMVQISLTNSIYWNAHTFALTESGKLFAFGAGDQGQLG 511
Score = 262 (97.3 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 86/278 (30%), Positives = 131/278 (47%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDT 116
G T+ E V +L +I+QAA G + + D G+ YA CG+E + +
Sbjct: 178 GHTEDEARIQPVRSLQGVRIIQAAAGAARTMLISDDGKVYA--------CGKESFGEAEY 229
Query: 117 GRILRRDIVIPQRCAP--KLIVRQVAAGGTHSVVLTREGHVWT--WGQPWPPGDIKQIS- 171
G + + PQ + V Q A G + VL+REG V+T WG G + +
Sbjct: 230 GGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGNDGRLGHQTEAAD 289
Query: 172 -VPVRVQG-LEQVKL--IAVGAFHNLAL--QEDG-ALWAWGNNEYGQLGTGDTQPRSQPI 224
P + G LE V + IA G + LAL Q +G ++++ G G+LG G P
Sbjct: 290 VEPRPLLGPLENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPR 349
Query: 225 PVQGLSGLTLVD--IAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNL 282
++ L L +AAG WH+ + DG V WG G +G LG G+ + S VP+ V
Sbjct: 350 VIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES--VPKVVEG 407
Query: 283 LAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGY 320
L+ V V+ G + ++ DG ++SFG G+ LG+
Sbjct: 408 LSHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGH 445
Score = 225 (84.3 bits), Expect = 5.0e-16, P = 5.0e-16
Identities = 49/161 (30%), Positives = 86/161 (53%)
Query: 180 EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAA 239
E+ + +A G H++A+ G ++ +G N GQLG G T+ ++ PV+ L G+ ++ AA
Sbjct: 144 EKSQAVA-GPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAA 202
Query: 240 GGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSV 299
G + ++DDG+VY G+ G +G PQ V L +VQ + G +
Sbjct: 203 GAARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTA 262
Query: 300 ALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEV--PI-NIP 337
L+R+G +++F G+ GRLG+ + +P + P+ N+P
Sbjct: 263 VLSREGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVP 303
Score = 224 (83.9 bits), Expect = 6.5e-16, P = 6.5e-16
Identities = 77/270 (28%), Positives = 129/270 (47%)
Query: 78 QAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVR 137
QA G H +AV +G Y +G N GQ G +D RI P R + +
Sbjct: 147 QAVAGPGHSVAVTSKGEVYTFGYNNSGQLGHG--HTEDEARIQ------PVRSLQGVRII 198
Query: 138 QVAAGGTHSVVLTREGHVW-----TWGQPWPPGD-IKQISVPVRVQGLEQVKLI--AVGA 189
Q AAG +++++ +G V+ ++G+ G K ++ P V L+ + ++ A+G
Sbjct: 199 QAAAGAARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGN 258
Query: 190 FHNLALQEDGALW--AWGNNEYGQLGTGDTQPRSQPIPVQG-LSGLTLVDIAAGGWHSTA 246
+ L +G ++ +WGN+ G+LG +P P+ G L + +V IAAG + A
Sbjct: 259 YFTAVLSREGKVYTFSWGND--GRLGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLA 316
Query: 247 LT--DDG-EVYGWGRGEHGRLGFGDN-DKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALT 302
L +G VY G G G+LG G D+ V ++ +L + V V+ G H+ +
Sbjct: 317 LACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRV-VAAGAWHAAVVG 375
Query: 303 RDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
+DG + ++G G +G LG+G + P V
Sbjct: 376 QDGRVCTWGWGRYGCLGHGNEECESVPKVV 405
Score = 95 (38.5 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 28/111 (25%), Positives = 48/111 (43%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDT 116
G + E++P V LS+ K V A G + V D G Y++G E G P +
Sbjct: 394 GNEECESVPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQG 453
Query: 117 GR---ILRRDIVIPQRCAPKLIVRQVAAGGT-----HSVVLTREGHVWTWG 159
R +L +V + + +V Q++ + H+ LT G ++ +G
Sbjct: 454 NRHANVLSPTVVTSLKQVNERMV-QISLTNSIYWNAHTFALTESGKLFAFG 503
Score = 85 (35.0 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK 58
+ S + +G GQLG G+ E+ + V++L+ ++ AG+ ++ I DDGK
Sbjct: 158 VTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTMLISDDGK 215
>UNIPROTKB|E2QYQ5 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 OMA:HHYQDGI
GeneTree:ENSGT00700000104312 EMBL:AAEX03016202
Ensembl:ENSCAFT00000026962 Uniprot:E2QYQ5
Length = 4863
Score = 335 (123.0 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 89/295 (30%), Positives = 153/295 (51%)
Query: 84 WHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLI-VRQVAAG 142
WH D Y WG +GQ E GR ++++P AP +QV G
Sbjct: 3992 WHLGGKCD---VYLWGAGRHGQLAE-------AGR----NVMVPA-AAPSFSQAQQVICG 4036
Query: 143 GTHSVVLTREGHVWTWGQ-------PWPPGDIKQISVPVRVQGLEQVKLI-AVGAF-HNL 193
+ V+ G V G+ D+ ++V +QG +L+ + G+ H++
Sbjct: 4037 QNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSM 4096
Query: 194 ALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEV 253
AL E G +++WG+ +YG+LG G++ + +P ++ L G +V ++ G HS +T DG++
Sbjct: 4097 ALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKL 4156
Query: 254 YGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGH-IFSFGR 312
+ +G G++GRLG G+ S+K +P++V L G I QV+CG H++A++ DG +++FG
Sbjct: 4157 FTFGNGDYGRLGLGNT--SNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGD 4214
Query: 313 GDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
GD+G+LG G P +V + G G+ K VACG + ++A+ +
Sbjct: 4215 GDYGKLGLGNSTAKSSPQKVDVL------CGIGI------KKVACGTQFSVALTK 4257
Score = 333 (122.3 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 95/296 (32%), Positives = 151/296 (51%)
Query: 78 QAAIGGWHC-LAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIV 136
Q I G +C + G A G YG+ G+ DD +L I Q +V
Sbjct: 4031 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDL-HVLTV-ISALQGFVVTQLV 4086
Query: 137 RQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGL--EQVKLIAVGAF 190
+ G HS+ LT G V++WG G+ + P +++ L E+V ++ G
Sbjct: 4087 TSCGSDG-HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFK 4145
Query: 191 HNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDD 250
H+ + DG L+ +GN +YG+LG G+T + P V L G + +A G H+ A++ D
Sbjct: 4146 HSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4205
Query: 251 GE-VYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFS 309
G V+ +G G++G+LG G++ ++K PQKV++L G I +V+CG SVALT+DGH+++
Sbjct: 4206 GSMVWAFGDGDYGKLGLGNS--TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4263
Query: 310 FGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
FG+ L GR +P ++P+ GV + + VA G HTLA+
Sbjct: 4264 FGQDRLIGLPEGRARNHNRPQQIPVLA--------GV----VIEDVAVGAEHTLAL 4307
Score = 329 (120.9 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 95/351 (27%), Positives = 166/351 (47%)
Query: 7 IIAWGSGEDGQLG-IGNN-----------EEREWVCVVKALEPYKVR-SVVAGSRNSLAI 53
+ WG+G GQL G N + ++ +C + +V+A S
Sbjct: 4000 VYLWGAGRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGR 4059
Query: 54 CDDGKTKTENIPSQVNALSN---TKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEP 110
G + ++ + ++AL T++V + H +A+ + G ++WG +YG+ G
Sbjct: 4060 LGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGN 4119
Query: 111 ERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----WPPGD 166
+ RR I +++ Q++ G HS V+T +G ++T+G G+
Sbjct: 4120 SDRQ------RRPRQIEALQGEEVV--QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4171
Query: 167 IKQISVPVRVQGLE--QVKLIAVGAFHNLALQEDGAL-WAWGNNEYGQLGTGDTQPRSQP 223
+P RV LE Q+ +A G H LA+ DG++ WA+G+ +YG+LG G++ +S P
Sbjct: 4172 TSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSP 4231
Query: 224 IPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLL 283
V L G+ + +A G S ALT DG VY +G+ +G + + PQ++ +L
Sbjct: 4232 QKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR--LIGLPEGRARNHNRPQQIPVL 4289
Query: 284 AGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPI 334
AG I V+ G H++AL G ++++G G+LG G +P V +
Sbjct: 4290 AGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4340
Score = 324 (119.1 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 92/332 (27%), Positives = 159/332 (47%)
Query: 40 VRSVVAGSRNSLAICDDGKTKT-ENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAW 98
VR+ GS L + D T + + + + S K+ + H LA +G ++W
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHR-SIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 99 GGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTW 158
G +YG+ G ++++ + K++V V+AG HS +T +G ++TW
Sbjct: 483 GDGDYGKLGHGNSSTQKYPKLIQGPL------QGKVVVC-VSAGYRHSAAVTEDGELYTW 535
Query: 159 GQP----WPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDG-ALWAWGNNE-YGQL 212
G+ GD ++P V+ + V ++ G+ H +AL +DG +W++G + G+L
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNVGKL 595
Query: 213 GTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKS 272
G GDT +P V+ L G+ + + AG S ALT G+VY WG G LG G ++ +
Sbjct: 596 GHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEAT 653
Query: 273 SKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
+ + P+ + LA IV +S G +H D ++++G G+ G G +TG
Sbjct: 654 A-LRPKLIEELAATRIVDISIGDSHVWLFVMDNEVYAWGNNSMGQCGQGN--STG----- 705
Query: 333 PINIPAPRNAGDGVDRRWIAKLVACGGRHTLA 364
PI P + DG+ + ++ G H+LA
Sbjct: 706 PITKPKKVSGLDGI----AIQQISAGTSHSLA 733
Score = 281 (104.0 bits), Expect = 1.7e-22, P = 1.7e-22
Identities = 86/293 (29%), Positives = 142/293 (48%)
Query: 44 VAGSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIGGWHC-LAVDDQGRAYAWGGNE 102
V GS +S + + + K P + S+ + ++A G +C + G A G
Sbjct: 376 VWGSNSSHQLVEGTQEKILQ-PKMALSFSDAQTIEA---GQYCTFVISTDGSVRACGKGS 431
Query: 103 YGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ-- 160
YG+ G T L++ P R K+ + + G H++ T EG V++WG
Sbjct: 432 YGRLGLGDSNNQST---LKKLTFEPHRSIKKVSSSKGSDG--HTLAFTTEGEVFSWGDGD 486
Query: 161 --PWPPGDIKQISVPVRVQGLEQVKLI---AVGAFHNLALQEDGALWAWGNNEYGQLGTG 215
G+ P +QG Q K++ + G H+ A+ EDG L+ WG ++G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 216 DTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGE-VYGWGRGEH-GRLGFGDNDKSS 273
D+ R+ P V+ +S + +++ G H+ AL+ DG V+ +G G++ G+LG GD ++
Sbjct: 547 DSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGDNVGKLGHGDTNRVY 604
Query: 274 KMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTT 326
K P+ V L G I +V G S+ALT G ++++G G LG G T
Sbjct: 605 K--PKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEAT 653
Score = 277 (102.6 bits), Expect = 4.4e-22, P = 4.4e-22
Identities = 87/272 (31%), Positives = 134/272 (49%)
Query: 1 MASTTS--IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK 58
MA T S + +WG G+ G+LG GN++ + ++AL+ +V + G ++S + DGK
Sbjct: 4096 MALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGK 4155
Query: 59 ----------------TKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNE 102
T + +P +V AL +I Q A G H LAV G + W +
Sbjct: 4156 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG-SMVWAFGD 4214
Query: 103 YGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP- 161
G G+ + T + + + + C + +++VA G SV LT++GHV+T+GQ
Sbjct: 4215 -GDYGKLG-LGNSTAKSSPQKVDV--LCG--IGIKKVACGTQFSVALTKDGHVYTFGQDR 4268
Query: 162 ---WPPGDIKQISVPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGD 216
P G + + P ++ L V + +AVGA H LAL G ++AWG+N GQLG G
Sbjct: 4269 LIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGH 4328
Query: 217 TQPRSQPIPVQGLSGLTLVDIAAGGWHSTALT 248
T +P V L G + I+AG HS A T
Sbjct: 4329 TNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4360
Score = 276 (102.2 bits), Expect = 5.6e-22, P = 5.6e-22
Identities = 85/281 (30%), Positives = 136/281 (48%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKA-LEPYKVRSVVAGSRNSLAICDDGKTKT---- 61
+ +WG G+ G+LG GN+ +++ +++ L+ V V AG R+S A+ +DG+ T
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 62 ------------ENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAW---GGNEYGQC 106
NIP+ V +SN + + + G H +A+ GR W GG+ G+
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSKDGRT-VWSFGGGDNVGKL 595
Query: 107 GEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG--QPWPP 164
G DT R+ + +V + +R+V AG S+ LT G V+ WG
Sbjct: 596 GH-----GDTNRVYKPKVV---EALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGC 647
Query: 165 GDIKQISV-PVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGD-TQPR 220
G + ++ P ++ L ++ I++G H D ++AWGNN GQ G G+ T P
Sbjct: 648 GSSEATALRPKLIEELAATRIVDISIGDSHVWLFVMDNEVYAWGNNSMGQCGQGNSTGPI 707
Query: 221 SQPIPVQGLSGLTLVDIAAGGWHS---TALTDDGEVYGWGR 258
++P V GL G+ + I+AG HS TAL D +V W R
Sbjct: 708 TKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 748
Score = 260 (96.6 bits), Expect = 4.9e-22, Sum P(2) = 4.9e-22
Identities = 72/255 (28%), Positives = 121/255 (47%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDT 116
G + + P Q+ AL ++VQ + G H V G+ + +G +YG+ G
Sbjct: 4118 GNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLG--------L 4169
Query: 117 GRILRRDIVIPQRCAPK--LIVRQVAAGGTHSVVLTREGH-VWTWGQ----PWPPGDIKQ 169
G + + P+R + QVA G H++ ++ +G VW +G G+
Sbjct: 4170 GNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4227
Query: 170 ISVPVRVQGL--EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQ 227
S P +V L +K +A G ++AL +DG ++ +G + L G + ++P +
Sbjct: 4228 KSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIP 4287
Query: 228 GLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGED 287
L+G+ + D+A G H+ AL G+VY WG G+LG G + + P V +L G++
Sbjct: 4288 VLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE--PTLVTVLQGKN 4345
Query: 288 IVQVSCGGTHSVALT 302
I Q+S G HS A T
Sbjct: 4346 IRQISAGRCHSAAWT 4360
Score = 258 (95.9 bits), Expect = 6.8e-19, Sum P(2) = 6.8e-19
Identities = 77/269 (28%), Positives = 125/269 (46%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIGGW-HCLAVDDQGRAYAWGGNEYGQCGEEPERKDD 115
G + T+ P + K+V G+ H AV + G Y WG ++G+ G D
Sbjct: 493 GNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG----DS 548
Query: 116 TGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGH-VWTWGQ-----PWPPGDIKQ 169
R IP V +V+ G +H++ L+++G VW++G GD +
Sbjct: 549 NSRN------IPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNVGKLGHGDTNR 602
Query: 170 ISVPVRVQGLEQ--VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS-QPIPV 226
+ P V+ L+ ++ + G+ +LAL G ++AWG LG G ++ + +P +
Sbjct: 603 VYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCGSSEATALRPKLI 660
Query: 227 QGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGE 286
+ L+ +VDI+ G H D EVY WG G+ G G N P+KV+ L G
Sbjct: 661 EELAATRIVDISIGDSHVWLFVMDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSGLDGI 719
Query: 287 DIVQVSCGGTHSVALT---RDGHIFSFGR 312
I Q+S G +HS+A T RD + ++ R
Sbjct: 720 AIQQISAGTSHSLAWTALPRDRQVVAWHR 748
Score = 252 (93.8 bits), Expect = 6.3e-18, P = 6.3e-18
Identities = 65/226 (28%), Positives = 110/226 (48%)
Query: 148 VLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWA 203
+++ V+ WG G ++I P + I G + + DG++ A
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKMALSFSDAQTIEAGQYCTFVISTDGSVRA 426
Query: 204 WGNNEYGQLGTGDTQPRS--QPIPVQGLSGLTLVDIAAGG-WHSTALTDDGEVYGWGRGE 260
G YG+LG GD+ +S + + + + V + G H+ A T +GEV+ WG G+
Sbjct: 427 CGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 261 HGRLGFGDNDKSSKMVPQKVN-LLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLG 319
+G+LG G++ S++ P+ + L G+ +V VS G HS A+T DG ++++G GD GRLG
Sbjct: 487 YGKLGHGNS--STQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 320 YGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
+G +P + N G+ V+CG HT+A+
Sbjct: 545 HG----DSNSRNIPTLVKDISNVGE----------VSCGSSHTIAL 576
Score = 183 (69.5 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 54/176 (30%), Positives = 85/176 (48%)
Query: 195 LQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVY 254
+ E ++ WG+N QL G + QP LS I AG + + ++ DG V
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQP--KMALSFSDAQTIEAGQYCTFVISTDGSVR 425
Query: 255 GWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCG-GT--HSVALTRDGHIFSFG 311
G+G +GRLG GD++ S + +K+ I +VS G+ H++A T +G +FS+G
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTL--KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483
Query: 312 RGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
GD+G+LG+G T + P I P + V+ G RH+ A+ E
Sbjct: 484 DGDYGKLGHGNSST----QKYPKLIQGPLQGK-------VVVCVSAGYRHSAAVTE 528
Score = 154 (59.3 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 54/179 (30%), Positives = 89/179 (49%)
Query: 6 SIIAWGSGED-GQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKT----- 59
++ ++G G++ G+LG G+ VV+AL+ +R V AGS++SLA+ G+
Sbjct: 582 TVWSFGGGDNVGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC 641
Query: 60 ----------KTENIPSQVNALSNTKIVQAAIGGWHC-LAVDDQGRAYAWGGNEYGQCGE 108
T P + L+ T+IV +IG H L V D YAWG N GQCG+
Sbjct: 642 GACLGCGSSEATALRPKLIEELAATRIVDISIGDSHVWLFVMDN-EVYAWGNNSMGQCGQ 700
Query: 109 EPERKDDTGRILRRDIVIPQRCA--PKLIVRQVAAGGTHSVVLT---REGHVWTWGQPW 162
+ TG I + P++ + + ++Q++AG +HS+ T R+ V W +P+
Sbjct: 701 G----NSTGPITK-----PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHRPY 750
Score = 76 (31.8 bits), Expect = 4.9e-22, Sum P(2) = 4.9e-22
Identities = 18/56 (32%), Positives = 35/56 (62%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVA--GSR-NSLAICDDGK 58
+++A G G G+LG GN+++ + V+ AL+ + V +V GS +S+A+ + G+
Sbjct: 4048 TVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE 4103
Score = 49 (22.3 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 16/61 (26%), Positives = 26/61 (42%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVK-ALEPYKVRSVVAGSRNSLAICDDGKT 59
++ T + WGS QL G E+ + K AL +++ AG + I DG
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEK---ILQPKMALSFSDAQTIEAGQYCTFVISTDGSV 424
Query: 60 K 60
+
Sbjct: 425 R 425
Score = 45 (20.9 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 25/99 (25%), Positives = 40/99 (40%)
Query: 12 SGEDGQLGIGNNEEREW----VCVVKALEPYKVRSVVAGSRNSLAICD---DGKTKTENI 64
SG DG + + N ++++ CV LE S+ + S S + GK +
Sbjct: 3447 SGNDGTIRVWNVTKKQYSLQQTCVFNRLEGDAEESLGSPSDPSFSPVSWSISGKYLAGAL 3506
Query: 65 PSQVNA--LSNTKIVQAAIGGW-HCLAVDDQGRAYAWGG 100
VN ++ K + W LA ++G A AW G
Sbjct: 3507 EKMVNIWQVNGGKGLVDIQPHWVSALAWPEEGPATAWSG 3545
Score = 45 (20.9 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 168 KQIS-VPVRVQGLEQVKLIAVGAFHNLALQEDGAL 201
KQ+ VP+ ++ LE+V L+ V +++ ED +
Sbjct: 4607 KQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDSGI 4641
>TAIR|locus:2099986 [details] [associations]
symbol:AT3G55580 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AL132975
HSSP:P18754 IPI:IPI00521720 PIR:T47697 RefSeq:NP_191117.1
UniGene:At.35013 ProteinModelPortal:Q9M2S1 SMR:Q9M2S1 PRIDE:Q9M2S1
EnsemblPlants:AT3G55580.1 GeneID:824723 KEGG:ath:AT3G55580
TAIR:At3g55580 InParanoid:Q9M2S1 OMA:HPIPCIE PhylomeDB:Q9M2S1
ProtClustDB:CLSN2685056 Genevestigator:Q9M2S1 Uniprot:Q9M2S1
Length = 488
Score = 269 (99.8 bits), Expect = 1.6e-29, Sum P(3) = 1.6e-29
Identities = 60/172 (34%), Positives = 90/172 (52%)
Query: 175 RVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTL 234
RV G VK IA G H+ + + GAL +G YGQ G G T P V L G+ +
Sbjct: 307 RVLG-SYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRI 365
Query: 235 VDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFG-DNDKSSKMVPQKVNLLAGEDIVQVSC 293
++AAG WH+T + DG+VY +G + G+LG G D ++ + + NL ++ +SC
Sbjct: 366 EEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNL-ENVNVKTISC 424
Query: 294 GGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDG 345
G H+ +T +G +F +G +G+LG G + P EV I P+N G
Sbjct: 425 GARHTAVITDEGRVFCWGWNKYGQLGIGDVIDRNAPAEVRIKDCFPKNIACG 476
Score = 200 (75.5 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 68/249 (27%), Positives = 110/249 (44%)
Query: 10 WGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKTENIPSQVN 69
WG G +GQLG+G+ V +V + P+ + + S G + + Q
Sbjct: 258 WGYGGEGQLGLGSR-----VRLVSS--PHPIPCIEPSSYGKAT--SSGVNMSSVV--QCG 306
Query: 70 ALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQR 129
+ + + + A GG H + D G +G YGQCG+ DD +
Sbjct: 307 RVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGST--DDE---------LSPT 355
Query: 130 CAPKLI---VRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVP--VRVQGLE 180
C L+ + +VAAG H+ + +G V+ +G G + ++P + LE
Sbjct: 356 CVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLE 415
Query: 181 QV--KLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIA 238
V K I+ GA H + ++G ++ WG N+YGQLG GD R+ P V+ + +IA
Sbjct: 416 NVNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDVIDRNAPAEVR-IKDCFPKNIA 474
Query: 239 AGGWHSTAL 247
G WH+ L
Sbjct: 475 CGWWHTLLL 483
Score = 196 (74.1 bits), Expect = 5.1e-16, Sum P(2) = 5.1e-16
Identities = 64/208 (30%), Positives = 95/208 (45%)
Query: 185 IAVGAFHNLALQEDGALWAWGNNEYGQLGTGD-TQPRSQPIPVQGL----------SGLT 233
+A G H LAL + G +W WG GQLG G + S P P+ + SG+
Sbjct: 239 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSYGKATSSGVN 298
Query: 234 LVD--------------IAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 279
+ IA GG HS +TD G + +G G +G+ G G D ++ P
Sbjct: 299 MSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTD--DELSPTC 356
Query: 280 VNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
V+ L G I +V+ G H+ + DG +++FG G+LG G Q +P + AP
Sbjct: 357 VSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTG----CDQAETLPKLLEAP 412
Query: 340 RNAGDGVDRRWIAKLVACGGRHTLAIVE 367
N + V+ K ++CG RHT I +
Sbjct: 413 -NL-ENVN----VKTISCGARHTAVITD 434
Score = 136 (52.9 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 53/194 (27%), Positives = 80/194 (41%)
Query: 77 VQAAIGGW-HCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLI 135
VQ A GW HC+AV + + Y WG E G + D G R+I
Sbjct: 119 VQKAEAGWAHCVAVTENQQVYTWGWRECIPTGRVFGQVD--GDSCERNISFSTEQVSSSS 176
Query: 136 VRQVAAGGTHSVVLTREGHVWTWGQPWPPG-----------DIKQISVPVRVQGLEQVKL 184
+ ++GGT S V R G T + P +I ++P V V++
Sbjct: 177 QGKKSSGGTSSQVEGRGGGEPTKKRRISPSKQAAENSSQSDNIDLSALPCLVSLAPGVRI 236
Query: 185 IAV--GAFHNLALQEDGALWAWGNNEYGQLGTGD-TQPRSQPIPVQGLSGLTLVDIAAGG 241
++V G H LAL + G +W WG GQLG G + S P P+ + + + G
Sbjct: 237 VSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSYGKATSSG 296
Query: 242 WHSTALTDDGEVYG 255
+ +++ G V G
Sbjct: 297 VNMSSVVQCGRVLG 310
Score = 134 (52.2 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 54/211 (25%), Positives = 93/211 (44%)
Query: 182 VKLIAVGAFHNLALQEDGALWAWGNNE-------YGQLGTGDTQPRSQPIPVQGLSGLTL 234
V+ G H +A+ E+ ++ WG E +GQ+ GD+ R+ + +S +
Sbjct: 119 VQKAEAGWAHCVAVTENQQVYTWGWRECIPTGRVFGQVD-GDSCERNISFSTEQVSSSSQ 177
Query: 235 VDIAAGGWHSTAL-TDDGEVYGWGRGEHGRLGFGDNDKSSKM----VPQKVNLLAGEDIV 289
++GG S GE R + ++ +S + +P V+L G IV
Sbjct: 178 GKKSSGGTSSQVEGRGGGEPTKKRRISPSKQAAENSSQSDNIDLSALPCLVSLAPGVRIV 237
Query: 290 QVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVT-TGQPMEVPINIPAP--RNAGDGV 346
V+ GG H++AL+ G ++ +G G G+LG G +V P +P P+ + GV
Sbjct: 238 SVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSYGKATSSGV 297
Query: 347 DRRWIA----------KLVACGGRHTLAIVE 367
+ + K +ACGGRH+ I +
Sbjct: 298 NMSSVVQCGRVLGSYVKKIACGGRHSAVITD 328
Score = 116 (45.9 bits), Expect = 0.00080, P = 0.00080
Identities = 66/231 (28%), Positives = 102/231 (44%)
Query: 155 VWTWGQPWPPGDIKQISV---PVRVQ---GLEQV-KLIAVGAF-HNLALQEDGALWAWGN 206
V+ WG + PG Q S PV V+ +E K ++ G +A E G L WG+
Sbjct: 33 VYMWG--YLPGASPQRSPLMSPVEVKIPPAVESSWKDVSGGGCGFAMATAESGKLITWGS 90
Query: 207 -NEYGQ--LGTGDTQPRSQPIPVQGLSGLTLVDIAAGGW-HSTALTDDGEVYGWGRGE-- 260
++ GQ + +G +P P L V A GW H A+T++ +VY WG E
Sbjct: 91 TDDLGQSYVTSGKHGETPEPFP---LPPEVCVQKAEAGWAHCVAVTENQQVYTWGWRECI 147
Query: 261 -HGRLGFG--DNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGR 317
GR+ FG D D + + ++ + S GGT S R G + R R
Sbjct: 148 PTGRV-FGQVDGDSCERNISFSTEQVSSSSQGKKSSGGTSSQVEGRGGGEPTKKR----R 202
Query: 318 LGYGRKVT--TGQPMEVPIN-IPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
+ ++ + Q + ++ +P + GV R ++ VA GGRHTLA+
Sbjct: 203 ISPSKQAAENSSQSDNIDLSALPCLVSLAPGV--RIVS--VAAGGRHTLAL 249
Score = 87 (35.7 bits), Expect = 1.6e-29, Sum P(3) = 1.6e-29
Identities = 21/72 (29%), Positives = 30/72 (41%)
Query: 36 EPYKVRSVVAGSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRA 95
EP K R + + + +P V+ +IV A GG H LA+ D G+
Sbjct: 196 EPTKKRRISPSKQAAENSSQSDNIDLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQV 255
Query: 96 YAWGGNEYGQCG 107
+ WG GQ G
Sbjct: 256 WGWGYGGEGQLG 267
Score = 71 (30.1 bits), Expect = 2.9e-26, Sum P(2) = 2.9e-26
Identities = 26/97 (26%), Positives = 41/97 (42%)
Query: 64 IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGG-NEYGQCGEEPERKDDTGRILRR 122
IP V S+ K V G+ +A + G+ WG ++ GQ + +T
Sbjct: 57 IPPAVE--SSWKDVSGGGCGF-AMATAESGKLITWGSTDDLGQSYVTSGKHGETPE---- 109
Query: 123 DIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG 159
P P++ V++ AG H V +T V+TWG
Sbjct: 110 ----PFPLPPEVCVQKAEAGWAHCVAVTENQQVYTWG 142
Score = 57 (25.1 bits), Expect = 2.0e-26, Sum P(3) = 2.0e-26
Identities = 22/82 (26%), Positives = 36/82 (43%)
Query: 30 CVVKALEPYKVRSVVAGSRNSLAICDDGKTKTENI--PSQVNALSNTKIVQAAIGGWHCL 87
C+V ++ SV AG R++LA+ D G+ Q+ S ++V + C+
Sbjct: 226 CLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSP-HPIPCI 284
Query: 88 AVDDQGRAYAWGGNEYG--QCG 107
G+A + G N QCG
Sbjct: 285 EPSSYGKATSSGVNMSSVVQCG 306
Score = 39 (18.8 bits), Expect = 1.6e-29, Sum P(3) = 1.6e-29
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 2 ASTTSIIAWGSGED-GQLGIGNNEERE 27
A + +I WGS +D GQ + + + E
Sbjct: 80 AESGKLITWGSTDDLGQSYVTSGKHGE 106
>ZFIN|ZDB-GENE-030131-7951 [details] [associations]
symbol:rcbtb1 "regulator of chromosome
condensation (RCC1) and BTB (POZ) domain containing protein 1"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-030131-7951 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
CTD:55213 HOVERGEN:HBG053261 KO:K11494 HSSP:O87916 EMBL:BC045877
IPI:IPI00503126 RefSeq:NP_956285.1 UniGene:Dr.5968
ProteinModelPortal:Q7ZVG0 GeneID:336007 KEGG:dre:336007
InParanoid:Q7ZVG0 NextBio:20811137 ArrayExpress:Q7ZVG0
Uniprot:Q7ZVG0
Length = 531
Score = 330 (121.2 bits), Expect = 2.0e-29, P = 2.0e-29
Identities = 85/266 (31%), Positives = 137/266 (51%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIG-GWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDD 115
G +++ P +++ LS K++ + G G H L V + G YAWG N Y Q G +
Sbjct: 57 GDSQSTIAPKKLDCLSGKKLISLSYGSGPHVLLVTEDGELYAWGHNGYSQLGNGTTNQGV 116
Query: 116 TGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQIS 171
+ I++ K + +V+ G HS+ LT EG V+ WG G
Sbjct: 117 S------PILVSTNLQGKRVT-EVSCGSHHSLALTHEGEVFAWGYNNCGQVGSGSTANQP 169
Query: 172 VPVRVQGLEQVKLI---AVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQG 228
P +V Q K+I A G ++A+ ++G ++ WG N GQLG G+ + P +
Sbjct: 170 TPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLIA 229
Query: 229 LSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDI 288
L G ++ IA+G HS ALTD+G +Y WG +G+LG G+ KS+++ P +V + E I
Sbjct: 230 LQGFCVLQIASGYAHSLALTDEGLLYAWGANTYGQLGTGN--KSNQLSPVQV-MTEKERI 286
Query: 289 VQVS-CGGTH-SVALTRDGHIFSFGR 312
V+++ C TH S A T+ G ++ +G+
Sbjct: 287 VEIAACHSTHTSAAKTQSGQVYMWGQ 312
Score = 314 (115.6 bits), Expect = 1.2e-27, P = 1.2e-27
Identities = 71/209 (33%), Positives = 118/209 (56%)
Query: 133 KLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQ----ISVPVRVQGLEQVKL 184
K ++ G H +++T +G ++ WG G Q I V +QG ++V
Sbjct: 74 KKLISLSYGSGPHVLLVTEDGELYAWGHNGYSQLGNGTTNQGVSPILVSTNLQG-KRVTE 132
Query: 185 IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQG-LSGLTLVDIAAGGWH 243
++ G+ H+LAL +G ++AWG N GQ+G+G T + P V L +V+IA G
Sbjct: 133 VSCGSHHSLALTHEGEVFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTS 192
Query: 244 STALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTR 303
S A+TD+GEVYGWG +G+LG G+N +++ P ++ L G ++Q++ G HS+ALT
Sbjct: 193 SMAVTDNGEVYGWGYNGNGQLGLGNN--GNQLTPCRLIALQGFCVLQIASGYAHSLALTD 250
Query: 304 DGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
+G ++++G +G+LG G K P++V
Sbjct: 251 EGLLYAWGANTYGQLGTGNKSNQLSPVQV 279
Score = 235 (87.8 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 57/193 (29%), Positives = 96/193 (49%)
Query: 176 VQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLV 235
+ + Q + A + + D ++ G N LGTGD+Q P + LSG L+
Sbjct: 18 LSSIRQACIFGASANEAIYITHDDEVYVLGLNCSNCLGTGDSQSTIAPKKLDCLSGKKLI 77
Query: 236 DIAAG-GWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCG 294
++ G G H +T+DGE+Y WG + +LG G ++ + NL G+ + +VSCG
Sbjct: 78 SLSYGSGPHVLLVTEDGELYAWGHNGYSQLGNGTTNQGVSPILVSTNL-QGKRVTEVSCG 136
Query: 295 GTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKL 354
HS+ALT +G +F++G + G++G G T QP PR + + + I
Sbjct: 137 SHHSLALTHEGEVFAWGYNNCGQVGSGS--TANQP--------TPRKVSNCLQNKVIVN- 185
Query: 355 VACGGRHTLAIVE 367
+ACG ++A+ +
Sbjct: 186 IACGQTSSMAVTD 198
>UNIPROTKB|J9NWD8 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:AAEX03016202 Ensembl:ENSCAFT00000042764 Uniprot:J9NWD8
Length = 4118
Score = 335 (123.0 bits), Expect = 2.0e-29, Sum P(2) = 2.0e-29
Identities = 89/295 (30%), Positives = 153/295 (51%)
Query: 84 WHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLI-VRQVAAG 142
WH D Y WG +GQ E GR ++++P AP +QV G
Sbjct: 3248 WHLGGKCD---VYLWGAGRHGQLAE-------AGR----NVMVPA-AAPSFSQAQQVICG 3292
Query: 143 GTHSVVLTREGHVWTWGQ-------PWPPGDIKQISVPVRVQGLEQVKLI-AVGAF-HNL 193
+ V+ G V G+ D+ ++V +QG +L+ + G+ H++
Sbjct: 3293 QNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSM 3352
Query: 194 ALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEV 253
AL E G +++WG+ +YG+LG G++ + +P ++ L G +V ++ G HS +T DG++
Sbjct: 3353 ALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKL 3412
Query: 254 YGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGH-IFSFGR 312
+ +G G++GRLG G+ S+K +P++V L G I QV+CG H++A++ DG +++FG
Sbjct: 3413 FTFGNGDYGRLGLGNT--SNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGD 3470
Query: 313 GDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
GD+G+LG G P +V + G G+ K VACG + ++A+ +
Sbjct: 3471 GDYGKLGLGNSTAKSSPQKVDVL------CGIGI------KKVACGTQFSVALTK 3513
Score = 333 (122.3 bits), Expect = 3.3e-29, Sum P(2) = 3.3e-29
Identities = 95/296 (32%), Positives = 151/296 (51%)
Query: 78 QAAIGGWHC-LAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIV 136
Q I G +C + G A G YG+ G+ DD +L I Q +V
Sbjct: 3287 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDL-HVLTV-ISALQGFVVTQLV 3342
Query: 137 RQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGL--EQVKLIAVGAF 190
+ G HS+ LT G V++WG G+ + P +++ L E+V ++ G
Sbjct: 3343 TSCGSDG-HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFK 3401
Query: 191 HNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDD 250
H+ + DG L+ +GN +YG+LG G+T + P V L G + +A G H+ A++ D
Sbjct: 3402 HSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 3461
Query: 251 GE-VYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFS 309
G V+ +G G++G+LG G++ ++K PQKV++L G I +V+CG SVALT+DGH+++
Sbjct: 3462 GSMVWAFGDGDYGKLGLGNS--TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 3519
Query: 310 FGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
FG+ L GR +P ++P+ GV + + VA G HTLA+
Sbjct: 3520 FGQDRLIGLPEGRARNHNRPQQIPVLA--------GV----VIEDVAVGAEHTLAL 3563
Score = 329 (120.9 bits), Expect = 1.1e-27, P = 1.1e-27
Identities = 95/351 (27%), Positives = 166/351 (47%)
Query: 7 IIAWGSGEDGQLG-IGNN-----------EEREWVCVVKALEPYKVR-SVVAGSRNSLAI 53
+ WG+G GQL G N + ++ +C + +V+A S
Sbjct: 3256 VYLWGAGRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGR 3315
Query: 54 CDDGKTKTENIPSQVNALSN---TKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEP 110
G + ++ + ++AL T++V + H +A+ + G ++WG +YG+ G
Sbjct: 3316 LGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGN 3375
Query: 111 ERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----WPPGD 166
+ RR I +++ Q++ G HS V+T +G ++T+G G+
Sbjct: 3376 SDRQ------RRPRQIEALQGEEVV--QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 3427
Query: 167 IKQISVPVRVQGLE--QVKLIAVGAFHNLALQEDGAL-WAWGNNEYGQLGTGDTQPRSQP 223
+P RV LE Q+ +A G H LA+ DG++ WA+G+ +YG+LG G++ +S P
Sbjct: 3428 TSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSP 3487
Query: 224 IPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLL 283
V L G+ + +A G S ALT DG VY +G+ +G + + PQ++ +L
Sbjct: 3488 QKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR--LIGLPEGRARNHNRPQQIPVL 3545
Query: 284 AGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPI 334
AG I V+ G H++AL G ++++G G+LG G +P V +
Sbjct: 3546 AGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 3596
Score = 277 (102.6 bits), Expect = 3.7e-22, P = 3.7e-22
Identities = 87/272 (31%), Positives = 134/272 (49%)
Query: 1 MASTTS--IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK 58
MA T S + +WG G+ G+LG GN++ + ++AL+ +V + G ++S + DGK
Sbjct: 3352 MALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGK 3411
Query: 59 ----------------TKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNE 102
T + +P +V AL +I Q A G H LAV G + W +
Sbjct: 3412 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADG-SMVWAFGD 3470
Query: 103 YGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP- 161
G G+ + T + + + + C + +++VA G SV LT++GHV+T+GQ
Sbjct: 3471 -GDYGKLG-LGNSTAKSSPQKVDV--LCG--IGIKKVACGTQFSVALTKDGHVYTFGQDR 3524
Query: 162 ---WPPGDIKQISVPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGD 216
P G + + P ++ L V + +AVGA H LAL G ++AWG+N GQLG G
Sbjct: 3525 LIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGH 3584
Query: 217 TQPRSQPIPVQGLSGLTLVDIAAGGWHSTALT 248
T +P V L G + I+AG HS A T
Sbjct: 3585 TNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 3616
Score = 260 (96.6 bits), Expect = 3.5e-22, Sum P(2) = 3.5e-22
Identities = 72/255 (28%), Positives = 121/255 (47%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDT 116
G + + P Q+ AL ++VQ + G H V G+ + +G +YG+ G
Sbjct: 3374 GNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLG--------L 3425
Query: 117 GRILRRDIVIPQRCAPK--LIVRQVAAGGTHSVVLTREGH-VWTWGQ----PWPPGDIKQ 169
G + + P+R + QVA G H++ ++ +G VW +G G+
Sbjct: 3426 GNTSNKKL--PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 3483
Query: 170 ISVPVRVQGL--EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQ 227
S P +V L +K +A G ++AL +DG ++ +G + L G + ++P +
Sbjct: 3484 KSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIP 3543
Query: 228 GLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGED 287
L+G+ + D+A G H+ AL G+VY WG G+LG G + + P V +L G++
Sbjct: 3544 VLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE--PTLVTVLQGKN 3601
Query: 288 IVQVSCGGTHSVALT 302
I Q+S G HS A T
Sbjct: 3602 IRQISAGRCHSAAWT 3616
Score = 76 (31.8 bits), Expect = 3.5e-22, Sum P(2) = 3.5e-22
Identities = 18/56 (32%), Positives = 35/56 (62%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVA--GSR-NSLAICDDGK 58
+++A G G G+LG GN+++ + V+ AL+ + V +V GS +S+A+ + G+
Sbjct: 3304 TVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE 3359
Score = 45 (20.9 bits), Expect = 2.0e-29, Sum P(2) = 2.0e-29
Identities = 25/99 (25%), Positives = 40/99 (40%)
Query: 12 SGEDGQLGIGNNEEREW----VCVVKALEPYKVRSVVAGSRNSLAICD---DGKTKTENI 64
SG DG + + N ++++ CV LE S+ + S S + GK +
Sbjct: 2703 SGNDGTIRVWNVTKKQYSLQQTCVFNRLEGDAEESLGSPSDPSFSPVSWSISGKYLAGAL 2762
Query: 65 PSQVNA--LSNTKIVQAAIGGW-HCLAVDDQGRAYAWGG 100
VN ++ K + W LA ++G A AW G
Sbjct: 2763 EKMVNIWQVNGGKGLVDIQPHWVSALAWPEEGPATAWSG 2801
Score = 38 (18.4 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 12/36 (33%), Positives = 15/36 (41%)
Query: 54 CDDGK-TKTENIPSQVNALSNTKIVQAAIGGWHCLA 88
C G T P +V+ L I Q + G H LA
Sbjct: 4 CGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 39
>UNIPROTKB|Q9N1T2 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9615 "Canis lupus familiaris" [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0036064 "cilium basal body"
evidence=ISS] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0042384 "cilium assembly" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0007601 "visual perception"
evidence=ISS] [GO:0005794 "Golgi apparatus" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=IEA] [GO:0050896 "response to
stimulus" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0007601 GO:GO:0050896
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
GO:GO:0042384 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042073 eggNOG:COG5184 GO:GO:0036064
GO:GO:0036126 EMBL:AF148798 EMBL:AF148799 EMBL:AF148800
EMBL:AF148801 RefSeq:NP_001003126.1 UniGene:Cfa.3592
ProteinModelPortal:Q9N1T2 STRING:Q9N1T2 GeneID:403726
KEGG:cfa:403726 CTD:6103 HOGENOM:HOG000231314 HOVERGEN:HBG026899
InParanoid:Q9N1T2 NextBio:20817229 Uniprot:Q9N1T2
Length = 1003
Score = 337 (123.7 bits), Expect = 2.3e-29, P = 2.3e-29
Identities = 97/313 (30%), Positives = 155/313 (49%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDT 116
G T + P+ V AL K+ AA G H L + G+ YA GGN GQ G + T
Sbjct: 70 GSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERST 129
Query: 117 GRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ--PWPPG--DIKQISV 172
++ QR K ++Q++AG S LT +G ++ WG G ++ + V
Sbjct: 130 FHLI--SFFTSQR---K--IKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCV 182
Query: 173 PVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQ--PRSQPIPVQGLS 230
P +V + + I+ G +H+ + +G L+ +G E G+LG + P PV G+
Sbjct: 183 PQQVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIP 242
Query: 231 GLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQ 290
G +V +A GG H+ LT+ VY +G G+ G+LG G VP+ + + + I
Sbjct: 243 G-KVVQVACGGGHTVVLTEKA-VYTFGLGQFGQLGLG-TFLFETSVPKAIEHIKDQKISF 299
Query: 291 VSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRW 350
++CG H+ +T G +++FG G HG+LG G + +T Q + P + + R+
Sbjct: 300 IACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFI--------PTLCSNFL--RF 349
Query: 351 IAKLVACGGRHTL 363
I +LV+CGG HTL
Sbjct: 350 IVQLVSCGGCHTL 362
Score = 279 (103.3 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 76/236 (32%), Positives = 118/236 (50%)
Query: 139 VAAGGTHSVVLTREGHVWTWGQP-WPP---GDIKQISVPVRVQGL--EQVKLIAVGAFHN 192
++ G H+ V+T ++ +G W G +S P V+ L E+VK A G H
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99
Query: 193 LALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLV-DIAAGGWHSTALTDDG 251
L E G ++A G N GQLG GDT+ RS + + + ++AG S ALT+DG
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDG 159
Query: 252 EVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFG 311
E++ WG G++G + ++ VPQ+V + G+ I +SCG HS +T +G +++FG
Sbjct: 160 ELFMWGDNSEGQIGL--ENVTNVCVPQQVTV--GKPISWISCGYYHSAFVTTEGQLYTFG 215
Query: 312 RGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
+ G+LG ++ M P+ P G V VACGG HT+ + E
Sbjct: 216 EPECGKLGLPNQLLVNHRMPQPV----PGIPGKVVQ-------VACGGGHTVVLTE 260
Score = 270 (100.1 bits), Expect = 2.8e-21, P = 2.8e-21
Identities = 94/326 (28%), Positives = 148/326 (45%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTK 60
+ + +GS GQLG+G+ VKAL+P KV+ G ++L + GK
Sbjct: 50 VTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVY 109
Query: 61 TE--NIPSQVNA---------------LSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 103
N Q+ S KI Q + G A+ + G + WG N
Sbjct: 110 AAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSE 169
Query: 104 GQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP-- 161
GQ G E + T ++ +PQ+ + ++ G HS +T EG ++T+G+P
Sbjct: 170 GQIGLE----NVT------NVCVPQQVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPEC 219
Query: 162 WPPGDIKQISV----PVRVQGLE-QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGD 216
G Q+ V P V G+ +V +A G H + L E A++ +G ++GQLG G
Sbjct: 220 GKLGLPNQLLVNHRMPQPVPGIPGKVVQVACGGGHTVVLTEK-AVYTFGLGQFGQLGLGT 278
Query: 217 TQ-PRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKM 275
S P ++ + + IA G H+ +TD G +Y +G G HG+LG G + +++
Sbjct: 279 FLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQF 338
Query: 276 VPQKV-NLLAGEDIVQ-VSCGGTHSV 299
+P N L IVQ VSCGG H++
Sbjct: 339 IPTLCSNFL--RFIVQLVSCGGCHTL 362
Score = 252 (93.8 bits), Expect = 9.3e-19, P = 9.3e-19
Identities = 82/293 (27%), Positives = 136/293 (46%)
Query: 82 GGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAA 141
G H V + Y +G N +GQ G K + + P++ V+ A
Sbjct: 43 GDEHTAVVTGNNKLYMFGSNNWGQLGLGS--KSTVSKPTCVKALKPEK------VKFAAC 94
Query: 142 GGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQ---GLEQVKLIAVGAFHNLA 194
G H++V T G V+ G GD ++ S + ++K ++ G+ + A
Sbjct: 95 GRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAA 154
Query: 195 LQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVY 254
L EDG L+ WG+N GQ+G + + +P Q G + I+ G +HS +T +G++Y
Sbjct: 155 LTEDGELFMWGDNSEGQIGLENVT--NVCVPQQVTVGKPISWISCGYYHSAFVTTEGQLY 212
Query: 255 GWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGD 314
+G E G+LG + + +PQ V + G+ +VQV+CGG H+V LT +++FG G
Sbjct: 213 TFGEPECGKLGLPNQLLVNHRMPQPVPGIPGK-VVQVACGGGHTVVLTEKA-VYTFGLGQ 270
Query: 315 HGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
G+LG G + E + P+ D++ +ACG HT I +
Sbjct: 271 FGQLGLGTFL-----FETSV----PKAIEHIKDQK--ISFIACGENHTALITD 312
>UNIPROTKB|F1NUG6 [details] [associations]
symbol:Gga.50841 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005929
"cilium" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0005929 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 EMBL:AADN02011054 IPI:IPI00586770
Ensembl:ENSGALT00000026211 OMA:ENGLMFT Uniprot:F1NUG6
Length = 720
Score = 324 (119.1 bits), Expect = 2.9e-28, P = 2.9e-28
Identities = 95/293 (32%), Positives = 147/293 (50%)
Query: 52 AICDDGKTK-TENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG--- 107
A+ GK+ ENIPS+ N K V + G H V G+ Y +G N++GQ G
Sbjct: 15 AVFTFGKSNFAENIPSKF-WFKNDKPVHISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGS 73
Query: 108 EEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPP--- 164
+ RK + L+ P++ KL V G H++V T +G+V+ G
Sbjct: 74 KNTVRKPTCVKALK-----PEKT--KLAV----CGRNHTLVYTEKGNVYAAGGNSEGQLG 122
Query: 165 -GDIKQISVPVRVQ---GLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPR 220
GD ++ + + ++K +A G++ + A+ EDG L+ WG+N GQ+G D
Sbjct: 123 LGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADKTCV 182
Query: 221 SQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV 280
S P V G + I+ G +HS +T DGE+Y +G E+G+LG + VPQ V
Sbjct: 183 SVPCQVD--VGKPVSSISCGYYHSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPV 240
Query: 281 NLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKV-TTGQPMEV 332
L E + +V+CGG H+V LT G +++FG G +G+LG+G + T P V
Sbjct: 241 -LGIMEKVNKVACGGEHTVVLTETG-VYTFGLGQYGQLGHGTLLFKTSVPKSV 291
Score = 321 (118.1 bits), Expect = 6.1e-28, P = 6.1e-28
Identities = 105/327 (32%), Positives = 158/327 (48%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDT 116
G T P+ V AL K A G H L ++G YA GGN GQ G + T
Sbjct: 72 GSKNTVRKPTCVKALKPEKTKLAVCGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTT 131
Query: 117 GRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI----KQ-IS 171
++ Q K ++Q+AAG S +T +G ++ WG G I K +S
Sbjct: 132 FHLI--SFFTNQH---K--IKQLAAGSYTSAAVTEDGQLFVWGDN-SEGQIGLADKTCVS 183
Query: 172 VPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSG 231
VP +V + V I+ G +H+ + DG L+ +G E G+LG Q ++ +P L
Sbjct: 184 VPCQVDVGKPVSSISCGYYHSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGI 243
Query: 232 LTLVD-IAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDN-DKSSKMVPQKVNLLAGEDIV 289
+ V+ +A GG H+ LT+ G VY +G G++G+LG G K+S VP+ V L I
Sbjct: 244 MEKVNKVACGGEHTVVLTETG-VYTFGLGQYGQLGHGTLLFKTS--VPKSVKHLRSHKIH 300
Query: 290 QVSCGGTHS--VALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVD 347
V+CG +H+ +A T +G +F+FG G HG+LG G + Q + P + +
Sbjct: 301 NVTCGESHTAVIADTENGLMFTFGDGRHGKLGLGEENFANQ-FD-------PALCSNFLS 352
Query: 348 RRWIAKLVACGGRHTLAIVEWQTEESK 374
+ LVACGG H L + +ES+
Sbjct: 353 --FTVLLVACGGCHMLVFATPRPKESE 377
Score = 188 (71.2 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 67/235 (28%), Positives = 115/235 (48%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKAL-EPYKVRSVVAGSRNSLAICDDGKTKT--E 62
++ A G +GQLG+G+ EER ++ +K++ + AGS S A+ +DG+ +
Sbjct: 109 NVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGD 168
Query: 63 NIPSQVNALSNTKI---VQAAIG--------GW-HCLAVDDQGRAYAWGGNEYGQCGEEP 110
N Q+ T + Q +G G+ H + G Y +G E G+ G P
Sbjct: 169 NSEGQIGLADKTCVSVPCQVDVGKPVSSISCGYYHSAFITGDGELYTFGEPENGKLGLLP 228
Query: 111 ERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG--QPWPPGD-- 166
E+ ++ R+ + + I ++ V +VA GG H+VVLT G V+T+G Q G
Sbjct: 229 EQLKNS-RVPQPVLGIMEK------VNKVACGGEHTVVLTETG-VYTFGLGQYGQLGHGT 280
Query: 167 -IKQISVPVRVQGLEQVKL--IAVGAFHN--LALQEDGALWAWGNNEYGQLGTGD 216
+ + SVP V+ L K+ + G H +A E+G ++ +G+ +G+LG G+
Sbjct: 281 LLFKTSVPKSVKHLRSHKIHNVTCGESHTAVIADTENGLMFTFGDGRHGKLGLGE 335
Score = 183 (69.5 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 43/154 (27%), Positives = 71/154 (46%)
Query: 185 IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHS 244
I+ G H + +G L+ +G+N++GQLG G +P V+ L G H+
Sbjct: 42 ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAVCGRNHT 101
Query: 245 TALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGED-IVQVSCGGTHSVALTR 303
T+ G VY G G+LG GD ++ + ++ + I Q++ G S A+T
Sbjct: 102 LVYTEKGNVYAAGGNSEGQLGLGDTEERTTF--HLISFFTNQHKIKQLAAGSYTSAAVTE 159
Query: 304 DGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIP 337
DG +F +G G++G K P +V + P
Sbjct: 160 DGQLFVWGDNSEGQIGLADKTCVSVPCQVDVGKP 193
>UNIPROTKB|E1BVG2 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 OMA:NCSNCLG EMBL:AADN02005390
IPI:IPI00590638 Ensembl:ENSGALT00000027473 Uniprot:E1BVG2
Length = 531
Score = 318 (117.0 bits), Expect = 4.4e-28, P = 4.4e-28
Identities = 76/221 (34%), Positives = 124/221 (56%)
Query: 125 VIPQR----CAPKLIVRQVAAG-GTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVR 175
++P++ C K + ++ G G H ++ T +G V+ WG G Q PV+
Sbjct: 63 IVPKKLEALCGKK--ISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLGNGATNQGVTPVQ 120
Query: 176 VQG---LEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQG-LSG 231
V L++V +A G+ H++AL DG L+AWG N GQ+G+G T + P V L
Sbjct: 121 VCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQD 180
Query: 232 LTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQV 291
+V IA G S A+ ++GEVYGWG +G+LG G+N +++ P +V L G I+Q+
Sbjct: 181 KMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNN--GNQLTPCRVAALHGVCILQI 238
Query: 292 SCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
+CG H++ALT +G ++++G +G+LG G K P+++
Sbjct: 239 ACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLSPLQI 279
Score = 315 (115.9 bits), Expect = 9.6e-28, P = 9.6e-28
Identities = 82/266 (30%), Positives = 137/266 (51%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIG-GWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDD 115
G +++ +P ++ AL KI + G G H L + G YAWG N Y Q G +
Sbjct: 57 GDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLGNGATNQGV 116
Query: 116 TGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQIS 171
T + ++++ K+I +VA G HS+ L+ +G ++ WG G
Sbjct: 117 TPVQVCTNLLLK-----KVI--EVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQP 169
Query: 172 VPVRVQGLEQVKL---IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQG 228
P RV Q K+ IA G ++A+ +G ++ WG N GQLG G+ + P V
Sbjct: 170 TPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAA 229
Query: 229 LSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDI 288
L G+ ++ IA G H+ ALTD+G +Y WG +G+LG G+ KS+++ P ++ ++ E +
Sbjct: 230 LHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGN--KSNQLSPLQI-MMEKERV 286
Query: 289 VQVS-CGGTH-SVALTRDGHIFSFGR 312
V+++ C H S A T+ G ++ +G+
Sbjct: 287 VEIAACHSAHTSAAKTQSGQVYMWGQ 312
Score = 265 (98.3 bits), Expect = 4.4e-21, P = 4.4e-21
Identities = 78/265 (29%), Positives = 133/265 (50%)
Query: 115 DTGRILRRDIVIPQRCAPKLIVRQVAAGGT---HSVVLTREGHVWTWGQPWP----PGDI 167
D G+ ++ PQ A +R+ GT ++ T V+ +G GD
Sbjct: 3 DVGKWPIFTLLSPQEIAS---IRKACVFGTSANEAIYTTHNDEVFVFGLNCSNCLGTGDS 59
Query: 168 KQISVPVRVQGL--EQVKLIAVGAF-HNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPI 224
+ VP +++ L +++ ++ G+ H L EDG ++AWG+N Y QLG G T P+
Sbjct: 60 QSTIVPKKLEALCGKKISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLGNGATNQGVTPV 119
Query: 225 PV-QGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV-NL 282
V L ++++A G HS AL+ DG++Y WG G++G G +++ P++V N
Sbjct: 120 QVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGST--ANQPTPRRVSNC 177
Query: 283 LAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNA 342
L + +V ++CG T S+A+ +G ++ +G +G+LG G G + P + A
Sbjct: 178 LQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNN---GNQL-TPCRVAALH-- 231
Query: 343 GDGVDRRWIAKLVACGGRHTLAIVE 367
GV I + +ACG HTLA+ +
Sbjct: 232 --GV---CILQ-IACGYAHTLALTD 250
>MGI|MGI:1351630 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide
exchange factor" species:10090 "Mus musculus" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0050709 "negative regulation of
protein secretion" evidence=ISO] [GO:0050790 "regulation of
catalytic activity" evidence=ISA] InterPro:IPR027048
MGI:MGI:1351630 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243952 EMBL:AK145819
EMBL:AK147848 EMBL:BC049603 EMBL:BC119533 EMBL:BC119534
IPI:IPI00134816 RefSeq:NP_038817.1 UniGene:Mm.76659
ProteinModelPortal:Q80YD6 SMR:Q80YD6 STRING:Q80YD6 PRIDE:Q80YD6
Ensembl:ENSMUST00000033127 GeneID:27414 KEGG:mmu:27414
UCSC:uc009gyp.2 InParanoid:Q80YD6 NextBio:305446 Bgee:Q80YD6
Genevestigator:Q80YD6 GermOnline:ENSMUSG00000030839 Uniprot:Q80YD6
Length = 464
Score = 312 (114.9 bits), Expect = 7.9e-28, P = 7.9e-28
Identities = 107/354 (30%), Positives = 163/354 (46%)
Query: 34 ALEPYKVRSVV-AGSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIGGW-HCLAVDD 91
A E +V+ A NS G + +P Q++ +++ GG H V D
Sbjct: 7 ASETVSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTD 66
Query: 92 QGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTR 151
G + G N+ GQ G T +LR I P R P +RQVA G +++LT
Sbjct: 67 GGDLFVCGLNKDGQLG-----LGHTEEVLRFTICKPLRGCP---IRQVACGWDFTIMLTE 118
Query: 152 EGHVWT-----WGQPWPPGDIKQISVPVRVQGL-EQVKLIAVGAFHNLALQEDGALWAWG 205
+G V + +GQ P ++ VP ++ L E+V +A G H LA G+++ WG
Sbjct: 119 KGQVLSCGSNAFGQLGVPHGPRKCVVPQAIECLREKVVCVAAGLRHALATTATGSVFQWG 178
Query: 206 NN--EYGQ-LGTGDTQP----RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGR 258
G+ L G P +P V GL T V AG HS +LTD GE+Y WGR
Sbjct: 179 TGLASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGR 238
Query: 259 GEHGRLGFGDNDKSSKMVPQKV--NLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHG 316
+HG+L + +PQ++ + E + V G TH VA T G +F++GR D+G
Sbjct: 239 NKHGQLA---SRAVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYG 295
Query: 317 RLGYGRKVTTGQ-PMEVPINIP--APRNAGDG-VDRRWIAKLVACGGRHTLAIV 366
+LG + Q P+E ++ P+N+ + A ++CG H LA++
Sbjct: 296 QLGRRLEPPEAQKPVEQDSSLAFQGPQNSVPSPLHCLTGATEISCGSEHNLAVI 349
Score = 186 (70.5 bits), Expect = 5.8e-16, Sum P(2) = 5.8e-16
Identities = 57/197 (28%), Positives = 90/197 (45%)
Query: 188 GAFHNLALQEDGALWAWGNNEYGQLGTGDT-QPRSQPIPVQGLSGLTLVDIAAGGWHSTA 246
G+ H+ +L + G L+ WG N++GQL + P Q I + + +G H A
Sbjct: 220 GSDHSASLTDTGELYVWGRNKHGQLASRAVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVA 279
Query: 247 LTDDGEVYGWGRGEHGRLGFG----------DNDKS------SKMVPQKVNLLAGEDIVQ 290
T+ G+V+ WGR ++G+LG + D S VP ++ L G +
Sbjct: 280 KTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQGPQNSVPSPLHCLTGA--TE 337
Query: 291 VSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRW 350
+SCG H++A+ RD S+G +HG G G + P V P+P R
Sbjct: 338 ISCGSEHNLAVIRD-KCCSWGWNEHGMCGDGTESNVWTPTPVQALPPSPS--------RL 388
Query: 351 IAKLVACGGRHTLAIVE 367
+ LV CG H+LA+ +
Sbjct: 389 L--LVGCGAGHSLAVCQ 403
Score = 128 (50.1 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 43/142 (30%), Positives = 64/142 (45%)
Query: 180 EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ----------------- 222
E+V + G H +A E G ++ WG +YGQLG P +Q
Sbjct: 265 EKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQGPQNS 324
Query: 223 -PIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVN 281
P P+ L+G T +I+ G H+ A+ D + WG EHG G D +S+ P V
Sbjct: 325 VPSPLHCLTGAT--EISCGSEHNLAVIRD-KCCSWGWNEHGMCG--DGTESNVWTPTPVQ 379
Query: 282 LL--AGEDIVQVSCGGTHSVAL 301
L + ++ V CG HS+A+
Sbjct: 380 ALPPSPSRLLLVGCGAGHSLAV 401
Score = 100 (40.3 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 30/81 (37%), Positives = 39/81 (48%)
Query: 169 QISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQG 228
Q SVP + L I+ G+ HNLA+ D +WG NE+G G G P PVQ
Sbjct: 322 QNSVPSPLHCLTGATEISCGSEHNLAVIRDKCC-SWGWNEHGMCGDGTESNVWTPTPVQA 380
Query: 229 L--SGLTLVDIAAGGWHSTAL 247
L S L+ + G HS A+
Sbjct: 381 LPPSPSRLLLVGCGAGHSLAV 401
Score = 81 (33.6 bits), Expect = 5.8e-16, Sum P(2) = 5.8e-16
Identities = 42/170 (24%), Positives = 65/170 (38%)
Query: 11 GSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKT--ENIPSQV 68
G +DGQLG+G+ EE + K L +R V G ++ + + G+ + N Q+
Sbjct: 74 GLNKDGQLGLGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQL 133
Query: 69 N------------ALS--NTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKD 114
A+ K+V A G H LA G + WG G R+
Sbjct: 134 GVPHGPRKCVVPQAIECLREKVVCVAAGLRHALATTATGSVFQWGTG-LASSG----RRL 188
Query: 115 DTGRILRRDIVIPQRCAPKLIVRQVA----AGGTHSVVLTREGHVWTWGQ 160
G+ L + + + A AG HS LT G ++ WG+
Sbjct: 189 CPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGR 238
Score = 69 (29.3 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 17/61 (27%), Positives = 32/61 (52%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYK----VRSVVAGSRNSLAICDD 56
+++ + AWG+ GQLG+G+ E+ V + + L + ++SV G +S + D
Sbjct: 11 VSAAAVLFAWGANSYGQLGLGHKED---VFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDG 67
Query: 57 G 57
G
Sbjct: 68 G 68
Score = 59 (25.8 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVV-KALEPY--KVRSVVAGSRNSLAICDDG 57
+++ GS GQLG+ + + CVV +A+E KV V AG R++LA G
Sbjct: 122 VLSCGSNAFGQLGVPHGPRK---CVVPQAIECLREKVVCVAAGLRHALATTATG 172
Score = 43 (20.2 bits), Expect = 5.1e-12, Sum P(2) = 5.1e-12
Identities = 19/55 (34%), Positives = 25/55 (45%)
Query: 3 STTSIIAWGSG--EDGQ-LGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAIC 54
+T S+ WG+G G+ L G N + A EP S V G NS A+C
Sbjct: 170 ATGSVFQWGTGLASSGRRLCPGQNLP----LFLTAKEP----SRVTGLENSTAVC 216
Score = 37 (18.1 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 6/18 (33%), Positives = 9/18 (50%)
Query: 1 MASTTSIIAWGSGEDGQL 18
+ T + WG + GQL
Sbjct: 227 LTDTGELYVWGRNKHGQL 244
>UNIPROTKB|O95199 [details] [associations]
symbol:RCBTB2 "RCC1 and BTB domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=TAS] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471075 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HOVERGEN:HBG053261 KO:K11494 EMBL:AF060219 EMBL:AY341245
EMBL:AK315703 EMBL:AL157813 EMBL:BC029052 IPI:IPI00658195
IPI:IPI00941277 PIR:T50663 RefSeq:NP_001259.1 UniGene:Hs.652712
ProteinModelPortal:O95199 SMR:O95199 IntAct:O95199
MINT:MINT-1481780 STRING:O95199 PhosphoSite:O95199 PRIDE:O95199
DNASU:1102 Ensembl:ENST00000344532 GeneID:1102 KEGG:hsa:1102
UCSC:uc001vch.3 CTD:1102 GeneCards:GC13M049063 HGNC:HGNC:1914
HPA:HPA040242 MIM:603524 neXtProt:NX_O95199 PharmGKB:PA26450
InParanoid:O95199 OrthoDB:EOG4M91R6 PhylomeDB:O95199 ChiTaRS:RCBTB2
GenomeRNAi:1102 NextBio:4558 ArrayExpress:O95199 Bgee:O95199
CleanEx:HS_RCBTB2 Genevestigator:O95199 GermOnline:ENSG00000136161
Uniprot:O95199
Length = 551
Score = 316 (116.3 bits), Expect = 8.8e-28, P = 8.8e-28
Identities = 83/258 (32%), Positives = 129/258 (50%)
Query: 65 PSQVNALSNTKIVQAAIG-GWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRD 123
P ++++L+ KI + G G H + +G + WG N Y Q G G +
Sbjct: 89 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNH---GLV---P 142
Query: 124 IVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG-----QPWPPGDIKQISVPVRVQG 178
I + K ++ +VA G HS+VLT +G V+ WG Q + Q +P RV G
Sbjct: 143 CHISTNLSNKQVI-EVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRVTG 200
Query: 179 LEQVKL---IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLV 235
Q K+ IA G +A+ + G ++ WG N GQLG G++ + P V L G+ +
Sbjct: 201 CLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQ 260
Query: 236 DIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGG 295
+A G H+ LTD+G+VY WG +G+LG G+ KS++ P V + I +C
Sbjct: 261 RVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN--KSNQSYPTPVTVEKDRIIEIAACHS 318
Query: 296 TH-SVALTRDGHIFSFGR 312
TH S A T+ GH++ +G+
Sbjct: 319 THTSAAKTQGGHVYMWGQ 336
Score = 308 (113.5 bits), Expect = 6.8e-27, P = 6.8e-27
Identities = 81/232 (34%), Positives = 119/232 (51%)
Query: 143 GTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQ-GL--EQVKLIAVGAFHNLAL 195
G H V+ T EG V+TWG G VP + L +QV +A G++H+L L
Sbjct: 108 GPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVL 167
Query: 196 QEDGALWAWGNNEYGQLGTGDTQPRSQPIP--VQG-LSGLTLVDIAAGGWHSTALTDDGE 252
DG ++AWG N GQ+G+G T +QPIP V G L +V IA G A+ D GE
Sbjct: 168 TSDGEVFAWGYNNSGQVGSGSTV--NQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGE 225
Query: 253 VYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGR 312
VY WG +G+LG G++ ++ P +V L G + +V+CG H++ LT +G ++++G
Sbjct: 226 VYVWGYNGNGQLGLGNS--GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 283
Query: 313 GDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLA 364
+G+LG G K P P+ + R I ++ AC HT A
Sbjct: 284 NSYGQLGTGNKSNQSYP--TPVTVEKDR----------IIEIAACHSTHTSA 323
Score = 245 (91.3 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 63/208 (30%), Positives = 106/208 (50%)
Query: 165 GDIKQISVPVRVQGLEQVKL--IAVGAFHNLALQE-DGALWAWGNNEYGQLGTGDTQPRS 221
GD++ P R+ L K+ ++ G+ ++ L +G ++ WG+N Y QLG G T
Sbjct: 81 GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGL 140
Query: 222 QPIPVQ-GLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV 280
P + LS ++++A G +HS LT DGEV+ WG G++G G ++ +P++V
Sbjct: 141 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGST--VNQPIPRRV 198
Query: 281 N-LLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
L + +V ++CG +A+ G ++ +G +G+LG G + QP P + A
Sbjct: 199 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGN--SGNQP--TPCRVAAL 254
Query: 340 RNAGDGVDRRWIAKLVACGGRHTLAIVE 367
+ G V R VACG HTL + +
Sbjct: 255 Q--GIRVQR------VACGYAHTLVLTD 274
Score = 206 (77.6 bits), Expect = 8.3e-14, P = 8.3e-14
Identities = 51/169 (30%), Positives = 86/169 (50%)
Query: 201 LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAG-GWHSTALTDDGEVYGWGRG 259
++ G N G LG GD Q +P + L+G + ++ G G H T +GEV+ WG
Sbjct: 67 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHN 126
Query: 260 EHGRLGFGDNDKSSKMVPQKVNL-LAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRL 318
+ +LG G + +VP ++ L+ + +++V+CG HS+ LT DG +F++G + G++
Sbjct: 127 AYSQLGNGTTNHG--LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQV 184
Query: 319 GYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
G G V N P PR G + + +ACG +A+V+
Sbjct: 185 GSGSTV----------NQPIPRRV-TGCLQNKVVVTIACGQMCCMAVVD 222
Score = 151 (58.2 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 54/174 (31%), Positives = 75/174 (43%)
Query: 43 VVAGSRNSLAICDDGKTKTENIPSQVNA-LSNTKIVQAAIGGWHCLAVDDQGRAYAWGGN 101
V A N+ G T + IP +V L N +V A G C+AV D G Y WG N
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 232
Query: 102 EYGQCGEEPERKDDTGRILRRDIVIPQRCAPK--LIVRQVAAGGTHSVVLTREGHVWTWG 159
GQ G T P R A + V++VA G H++VLT EG V+ WG
Sbjct: 233 GNGQLGLGNSGNQPT----------PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Query: 160 Q----PWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNL----ALQEDGALWAWG 205
G+ S P V +E+ ++I + A H+ A + G ++ WG
Sbjct: 283 ANSYGQLGTGNKSNQSYPTPVT-VEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 145 (56.1 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 35/105 (33%), Positives = 48/105 (45%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDT 116
G + + P +V AL ++ + A G H L + D+G+ YAWG N YGQ G T
Sbjct: 240 GNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG--------T 291
Query: 117 GRILRRDIVIPQRCAPKLIVRQVAAGGTH-SVVLTREGHVWTWGQ 160
G + P I+ A TH S T+ GHV+ WGQ
Sbjct: 292 GNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 336
Score = 62 (26.9 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 18/60 (30%), Positives = 26/60 (43%)
Query: 1 MASTTS-IIAWGSGEDGQLGIGNNEEREWVCVVKA-LEPYKVRSVVAGSRNSLAICDDGK 58
+A+T + WG QLG G C + L +V V GS +SL + DG+
Sbjct: 113 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Score = 57 (25.1 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 15/59 (25%), Positives = 26/59 (44%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVC-VVKALEPYKVRSVVAGSRNSLAICDDGK 58
+ S + AWG GQ+G G+ + V L+ V ++ G +A+ D G+
Sbjct: 167 LTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGE 225
>MGI|MGI:1918580 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 1" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 MGI:MGI:1918580
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104208 CTD:55213 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 OrthoDB:EOG4MSCXX EMBL:AK033501
EMBL:AK088299 EMBL:BC067005 IPI:IPI00469440 RefSeq:NP_082040.2
UniGene:Mm.234195 ProteinModelPortal:Q6NXM2 SMR:Q6NXM2
IntAct:Q6NXM2 STRING:Q6NXM2 PhosphoSite:Q6NXM2 PaxDb:Q6NXM2
PRIDE:Q6NXM2 Ensembl:ENSMUST00000022551 Ensembl:ENSMUST00000043227
GeneID:71330 KEGG:mmu:71330 UCSC:uc007ueb.2 InParanoid:Q6NXM2
NextBio:333557 Bgee:Q6NXM2 Genevestigator:Q6NXM2
GermOnline:ENSMUSG00000035469 Uniprot:Q6NXM2
Length = 531
Score = 315 (115.9 bits), Expect = 9.6e-28, P = 9.6e-28
Identities = 95/319 (29%), Positives = 151/319 (47%)
Query: 55 DDGKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKD 114
D GK + S A S K + V D + +G N Y C D
Sbjct: 3 DVGKWPIFTLLSPQEAGSIRKACVFGTSANEAIYVTDNDEVFVFGLN-YSNC---LGTGD 58
Query: 115 DTGRILRRDIVIPQRCAPKLIVRQVAAG-GTHSVVLTREGHVWTWGQ----PWPPGDIKQ 169
+ ++ + + C K ++ ++ G G H ++ T +G V+ WG G Q
Sbjct: 59 NQSTLVPKKL--EALCGKK--IKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQ 114
Query: 170 ISVPVRVQG---LEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPV 226
PV+V ++QV +A G+ H++AL DG L+AWG N GQ+G+G T + P V
Sbjct: 115 GIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKV 174
Query: 227 QG-LSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAG 285
L +V+IA G S A+ D GEVYGWG +G+LG G+N +++ P +V L G
Sbjct: 175 TNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNN--GNQLTPVRVAALHG 232
Query: 286 EDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDG 345
+ Q+ CG H++ALT +G ++++G +G+LG G K P ++
Sbjct: 233 MCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIM------------ 280
Query: 346 VDRRWIAKLVACGGRHTLA 364
V++ + ++ AC HT A
Sbjct: 281 VEKERVIEIAACHSTHTSA 299
Score = 307 (113.1 bits), Expect = 7.4e-27, P = 7.4e-27
Identities = 79/269 (29%), Positives = 132/269 (49%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIG-GWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDD 115
G ++ +P ++ AL KI + G G H L + G YAWG N Y Q G +
Sbjct: 57 GDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQG- 115
Query: 116 TGRILRRDIVIPQRCAPKLIVRQV---AAGGTHSVVLTREGHVWTWGQ----PWPPGDIK 168
+ P + L+++QV A G HS+ L +G ++ WG G
Sbjct: 116 ---------IAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTA 166
Query: 169 QISVPVRVQGL---EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIP 225
P +V ++V IA G ++A+ + G ++ WG N GQLG G+ + P+
Sbjct: 167 NQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVR 226
Query: 226 VQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAG 285
V L G+ + I G H+ ALTD+G +Y WG +G+LG G K++ + P ++ ++
Sbjct: 227 VAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGS--KNNLLSPTQI-MVEK 283
Query: 286 EDIVQVS-CGGTH-SVALTRDGHIFSFGR 312
E +++++ C TH S A T+ GH++ +G+
Sbjct: 284 ERVIEIAACHSTHTSAAKTQGGHVYMWGQ 312
Score = 272 (100.8 bits), Expect = 2.7e-22, P = 2.7e-22
Identities = 73/244 (29%), Positives = 126/244 (51%)
Query: 136 VRQVAAGGT---HSVVLTREGHVWTWGQPWP----PGDIKQISVPVRVQGL--EQVKLIA 186
+R+ GT ++ +T V+ +G + GD + VP +++ L +++K ++
Sbjct: 21 IRKACVFGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLS 80
Query: 187 VGAF-HNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPV-QGLSGLTLVDIAAGGWHS 244
G+ H L EDG ++AWG+N Y QLG G T P+ V L ++++A G HS
Sbjct: 81 YGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHS 140
Query: 245 TALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV-NLLAGEDIVQVSCGGTHSVALTR 303
AL DGE++ WG G++G G +++ P+KV N L + +V ++CG T S+A+
Sbjct: 141 MALAADGELFAWGYNNCGQVGSGST--ANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLD 198
Query: 304 DGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTL 363
G ++ +G +G+LG G G + P+ + A G V++ + CG HTL
Sbjct: 199 SGEVYGWGYNGNGQLGLGNN---GNQL-TPVRVAALH--GMCVNQ------IVCGYAHTL 246
Query: 364 AIVE 367
A+ +
Sbjct: 247 ALTD 250
>UNIPROTKB|Q9UII4 [details] [associations]
symbol:HERC5 "E3 ISG15--protein ligase HERC5" species:9606
"Homo sapiens" [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005737
"cytoplasm" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0032020 "ISG15-protein conjugation" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042296 "ISG15
ligase activity" evidence=IDA] [GO:0050688 "regulation of defense
response to virus" evidence=IDA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS] [GO:0032480
"negative regulation of type I interferon production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 EMBL:AY337518
EMBL:AB027289 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0048471 Reactome:REACT_6900 GO:GO:0000079
GO:GO:0045087 GO:GO:0019221 GO:GO:0051607 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
GO:GO:0032480 GO:GO:0050688 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 EMBL:AC083829 EMBL:BC140716
IPI:IPI00008821 RefSeq:NP_057407.2 UniGene:Hs.26663
ProteinModelPortal:Q9UII4 SMR:Q9UII4 DIP:DIP-44200N IntAct:Q9UII4
STRING:Q9UII4 PhosphoSite:Q9UII4 DMDM:296434523 PaxDb:Q9UII4
PRIDE:Q9UII4 Ensembl:ENST00000264350 GeneID:51191 KEGG:hsa:51191
UCSC:uc003hrt.3 CTD:51191 GeneCards:GC04P089378 H-InvDB:HIX0200636
HGNC:HGNC:24368 HPA:HPA043929 MIM:608242 neXtProt:NX_Q9UII4
PharmGKB:PA134973940 InParanoid:Q9UII4 OMA:KDWITNT
OrthoDB:EOG4N30N6 PhylomeDB:Q9UII4 GenomeRNAi:51191 NextBio:54182
ArrayExpress:Q9UII4 Bgee:Q9UII4 CleanEx:HS_HERC5
Genevestigator:Q9UII4 GermOnline:ENSG00000138646 GO:GO:0042296
GO:GO:0032020 Uniprot:Q9UII4
Length = 1024
Score = 321 (118.1 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 76/213 (35%), Positives = 116/213 (54%)
Query: 133 KLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI------KQISVPVRVQGLEQVKL-- 184
K I+ Q+ G HS+ L++ G ++ WGQ G + + P V+ L V L
Sbjct: 138 KKII-QITCGDYHSLALSKGGELFAWGQNLH-GQLGVGRKFPSTTTPQIVEHLAGVPLAQ 195
Query: 185 IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHS 244
I+ G H++AL G +++WG NE GQLG G T+ + P ++GL + +A GG HS
Sbjct: 196 ISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHS 255
Query: 245 TALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRD 304
LT DG ++ +G G+HG+LG N +++ P V L G + Q++CG H++A D
Sbjct: 256 ALLTQDGLLFTFGAGKHGQLGH--NSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSD 313
Query: 305 -GHIFSFGRGDHGRLGYGRKVTTGQPMEVPINI 336
G +FSFG G G+LG G T Q M +P+ +
Sbjct: 314 LGKVFSFGSGKDGQLGNGG--TRDQLMPLPVKV 344
Score = 307 (113.1 bits), Expect = 3.9e-26, P = 3.9e-26
Identities = 75/191 (39%), Positives = 108/191 (56%)
Query: 179 LEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ-PIPVQGLSGLTLV 235
L++ K+I + G +H+LAL + G L+AWG N +GQLG G P + P V+ L+G+ L
Sbjct: 135 LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLA 194
Query: 236 DIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGG 295
I+AG HS AL+ G +Y WG+ E G+LG G + SK P + L + + V+CGG
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTE--SKDDPSLIEGLDNQKVEFVACGG 252
Query: 296 THSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLV 355
+HS LT+DG +F+FG G HG+LG+ +P V + G V + +
Sbjct: 253 SHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELV------GYRVTQ------I 300
Query: 356 ACGGRHTLAIV 366
ACG HTLA V
Sbjct: 301 ACGRWHTLAYV 311
Score = 306 (112.8 bits), Expect = 5.1e-26, P = 5.1e-26
Identities = 86/292 (29%), Positives = 146/292 (50%)
Query: 11 GSG-EDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKT-KTENIPSQ- 67
G+G + QL G+ R C+ K + K+ SV G+ + L + DGK + +N +
Sbjct: 70 GAGVQVHQLLAGSGGARTPKCI-KLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYSMKH 128
Query: 68 ---VNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPE-RKDDTGRILRRD 123
+ L KI+Q G +H LA+ G +AWG N +GQ G + T +I+
Sbjct: 129 LRFESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHL 188
Query: 124 IVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGL 179
+P + Q++AG HS+ L+ G++++WG+ G + P ++GL
Sbjct: 189 AGVP--------LAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGL 240
Query: 180 E--QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDI 237
+ +V+ +A G H+ L +DG L+ +G ++GQLG TQ +P V L G + I
Sbjct: 241 DNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQI 300
Query: 238 AAGGWHSTALTDD-GEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDI 288
A G WH+ A D G+V+ +G G+ G+LG G +++P V + + E++
Sbjct: 301 ACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGT--RDQLMPLPVKVSSSEEL 350
Score = 211 (79.3 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 46/134 (34%), Positives = 75/134 (55%)
Query: 234 LVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSC 293
++ I G +HS AL+ GE++ WG+ HG+LG G S+ PQ V LAG + Q+S
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTT-TPQIVEHLAGVPLAQISA 198
Query: 294 GGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAK 353
G HS+AL+ G+I+S+G+ + G+LG G + P + +G+D + + +
Sbjct: 199 GEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLI-----------EGLDNQKV-E 246
Query: 354 LVACGGRHTLAIVE 367
VACGG H+ + +
Sbjct: 247 FVACGGSHSALLTQ 260
Score = 124 (48.7 bits), Expect = 0.00028, P = 0.00028
Identities = 27/68 (39%), Positives = 45/68 (66%)
Query: 281 NLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRK---VTTGQPMEVPINIP 337
++L + I+Q++CG HS+AL++ G +F++G+ HG+LG GRK TT Q +E +P
Sbjct: 133 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVP 192
Query: 338 -APRNAGD 344
A +AG+
Sbjct: 193 LAQISAGE 200
>MGI|MGI:1917200 [details] [associations]
symbol:Rcbtb2 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 2" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 MGI:MGI:1917200 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 CTD:1102 OrthoDB:EOG4M91R6
ChiTaRS:RCBTB2 EMBL:AK031242 EMBL:AK031248 EMBL:AK160881
EMBL:BC003224 IPI:IPI00308981 IPI:IPI00661148 RefSeq:NP_001164165.1
RefSeq:NP_598844.3 UniGene:Mm.280068 ProteinModelPortal:Q99LJ7
SMR:Q99LJ7 STRING:Q99LJ7 PhosphoSite:Q99LJ7 PaxDb:Q99LJ7
PRIDE:Q99LJ7 Ensembl:ENSMUST00000022702 Ensembl:ENSMUST00000110952
Ensembl:ENSMUST00000164822 Ensembl:ENSMUST00000169479
Ensembl:ENSMUST00000169513 Ensembl:ENSMUST00000170677 GeneID:105670
KEGG:mmu:105670 UCSC:uc007upj.2 UCSC:uc007upm.2 InParanoid:Q99LJ7
OMA:QMCSMAV NextBio:357822 Bgee:Q99LJ7 Genevestigator:Q99LJ7
GermOnline:ENSMUSG00000022106 Uniprot:Q99LJ7
Length = 551
Score = 314 (115.6 bits), Expect = 1.5e-27, P = 1.5e-27
Identities = 80/258 (31%), Positives = 130/258 (50%)
Query: 65 PSQVNALSNTKIVQAAIG-GWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRD 123
P ++++L+ KI + G G H + G + WG N Y Q G G +
Sbjct: 89 PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNH---GLV---P 142
Query: 124 IVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGL 179
I + K ++ +VA G HS+VLT +G V+ WG G +P RV G
Sbjct: 143 CHISTNLSNKQVI-EVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGC 201
Query: 180 EQVKL---IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVD 236
Q K+ IA G ++A+ + G ++ WG N GQLG G + + P V L G+ +
Sbjct: 202 LQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQR 261
Query: 237 IAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVS-CGG 295
+A G H+ LTD+G++Y WG +G+LG G+ KS++ P V ++ + I++++ C
Sbjct: 262 VACGYAHTLVLTDEGQIYAWGANSYGQLGTGN--KSNQSYPTPV-VVEKDRIIEIAACHS 318
Query: 296 TH-SVALTRDGHIFSFGR 312
H S A T+ GH++ +G+
Sbjct: 319 AHTSAAKTQGGHVYMWGQ 336
Score = 307 (113.1 bits), Expect = 8.7e-27, P = 8.7e-27
Identities = 82/232 (35%), Positives = 120/232 (51%)
Query: 143 GTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQ-GL--EQVKLIAVGAFHNLAL 195
G H V+ T +G V+TWG G VP + L +QV +A G++H+L L
Sbjct: 108 GPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVL 167
Query: 196 QEDGALWAWGNNEYGQLGTGDTQPRSQPIP--VQG-LSGLTLVDIAAGGWHSTALTDDGE 252
DG ++AWG N GQ+G+G T +QPIP V G L +++IA G S A+ D GE
Sbjct: 168 TSDGEVFAWGYNNSGQVGSGSTA--NQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGE 225
Query: 253 VYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGR 312
VY WG +G+LG G + ++ P +V L G + +V+CG H++ LT +G I+++G
Sbjct: 226 VYVWGYNGNGQLGLGSS--GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGA 283
Query: 313 GDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLA 364
+G+LG G K P V + DR I ++ AC HT A
Sbjct: 284 NSYGQLGTGNKSNQSYPTPVVVE----------KDR--IIEIAACHSAHTSA 323
Score = 254 (94.5 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 65/208 (31%), Positives = 108/208 (51%)
Query: 165 GDIKQISVPVRVQGLEQVKL--IAVGAFHNLALQE-DGALWAWGNNEYGQLGTGDTQPRS 221
GDI+ P R+ L K+ ++ G+ ++ L DG ++ WG+N Y QLG G T
Sbjct: 81 GDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGL 140
Query: 222 QPIPVQ-GLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV 280
P + LS ++++A G +HS LT DGEV+ WG G++G G +++ +P++V
Sbjct: 141 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGST--ANQPIPRRV 198
Query: 281 N-LLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
L + ++ ++CG S+A+ G ++ +G +G+LG G + QP P + A
Sbjct: 199 TGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS--SGNQP--TPCRVAAL 254
Query: 340 RNAGDGVDRRWIAKLVACGGRHTLAIVE 367
+ G V R VACG HTL + +
Sbjct: 255 Q--GIRVQR------VACGYAHTLVLTD 274
Score = 213 (80.0 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 52/169 (30%), Positives = 88/169 (52%)
Query: 201 LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAG-GWHSTALTDDGEVYGWGRG 259
++ G N G LG GD Q +P + L+G + ++ G G H T DGEV+ WG
Sbjct: 67 IFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHN 126
Query: 260 EHGRLGFGDNDKSSKMVPQKVNL-LAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRL 318
+ +LG G + +VP ++ L+ + +++V+CG HS+ LT DG +F++G + G++
Sbjct: 127 AYSQLGNGTTNHG--LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQV 184
Query: 319 GYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
G G T QP+ PR G + + +ACG ++A+V+
Sbjct: 185 GSGS--TANQPI--------PRRV-TGCLQNKVVMNIACGQMCSMAVVD 222
Score = 140 (54.3 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 51/174 (29%), Positives = 73/174 (41%)
Query: 43 VVAGSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIGGWHC-LAVDDQGRAYAWGGN 101
V A N+ G T + IP +V K+V G C +AV D G Y WG N
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYN 232
Query: 102 EYGQCGEEPERKDDTGRILRRDIVIPQRCAPK--LIVRQVAAGGTHSVVLTREGHVWTWG 159
GQ G T P R A + V++VA G H++VLT EG ++ WG
Sbjct: 233 GNGQLGLGSSGNQPT----------PCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 282
Query: 160 Q----PWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNL----ALQEDGALWAWG 205
G+ S P V +E+ ++I + A H+ A + G ++ WG
Sbjct: 283 ANSYGQLGTGNKSNQSYPTPVV-VEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 137 (53.3 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 34/105 (32%), Positives = 47/105 (44%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDT 116
G + + P +V AL ++ + A G H L + D+G+ YAWG N YGQ G T
Sbjct: 240 GSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLG--------T 291
Query: 117 GRILRRDIVIPQRCAPKLIVRQVAAGGTH-SVVLTREGHVWTWGQ 160
G + P I+ A H S T+ GHV+ WGQ
Sbjct: 292 GNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ 336
Score = 65 (27.9 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 16/59 (27%), Positives = 27/59 (45%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVC-VVKALEPYKVRSVVAGSRNSLAICDDGK 58
+ S + AWG GQ+G G+ + V L+ V ++ G S+A+ D G+
Sbjct: 167 LTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGE 225
Score = 62 (26.9 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 18/60 (30%), Positives = 26/60 (43%)
Query: 1 MASTTS-IIAWGSGEDGQLGIGNNEEREWVCVVKA-LEPYKVRSVVAGSRNSLAICDDGK 58
+A+T + WG QLG G C + L +V V GS +SL + DG+
Sbjct: 113 LATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 172
>RGD|1308467 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1) and
BTB (POZ) domain containing protein 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 RGD:1308467 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:CH474049
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
OrthoDB:EOG4MSCXX IPI:IPI00364409 RefSeq:NP_001101850.1
UniGene:Rn.229110 Ensembl:ENSRNOT00000037800 GeneID:361050
KEGG:rno:361050 UCSC:RGD:1308467 NextBio:675026 Uniprot:D4AD40
Length = 531
Score = 312 (114.9 bits), Expect = 2.1e-27, P = 2.1e-27
Identities = 93/319 (29%), Positives = 151/319 (47%)
Query: 55 DDGKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKD 114
D GK + S S K I + V D + +G N Y C D
Sbjct: 3 DVGKWPIFTLLSPQETGSIRKACVFGISASEAIYVTDSDEVFVFGLN-YSNC---LGTGD 58
Query: 115 DTGRILRRDIVIPQRCAPKLIVRQVAAG-GTHSVVLTREGHVWTWGQ----PWPPGDIKQ 169
+ ++ + + C + ++ ++ G G H ++ T +G V+ WG G Q
Sbjct: 59 NQSTLVPKKL--EALCGKR--IKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQ 114
Query: 170 ISVPVRVQG---LEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPV 226
P++V ++QV +A G+ H++AL DG L+AWG N GQ+G+G T + P V
Sbjct: 115 GIAPIQVCTNLLVKQVVEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKV 174
Query: 227 QG-LSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAG 285
L +V+IA G S A+ D GEVYGWG +G+LG G+N +++ P +V L G
Sbjct: 175 TNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNN--GNQLTPVRVAALHG 232
Query: 286 EDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDG 345
+ Q+ CG H++ALT +G ++++G +G+LG G K P ++
Sbjct: 233 VCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIM------------ 280
Query: 346 VDRRWIAKLVACGGRHTLA 364
V++ + ++ AC HT A
Sbjct: 281 VEKERVIEIAACHSTHTSA 299
Score = 301 (111.0 bits), Expect = 3.4e-26, P = 3.4e-26
Identities = 79/269 (29%), Positives = 132/269 (49%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIG-GWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDD 115
G ++ +P ++ AL +I + G G H L + G YAWG N Y Q G +
Sbjct: 57 GDNQSTLVPKKLEALCGKRIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQG- 115
Query: 116 TGRILRRDIVIPQRCAPKLIVRQV---AAGGTHSVVLTREGHVWTWGQ----PWPPGDIK 168
+ P + L+V+QV A G HS+ L +G ++ WG G
Sbjct: 116 ---------IAPIQVCTNLLVKQVVEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTA 166
Query: 169 QISVPVRVQGL---EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIP 225
P +V ++V IA G ++A+ + G ++ WG N GQLG G+ + P+
Sbjct: 167 NQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVR 226
Query: 226 VQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAG 285
V L G+ + I G H+ ALTD+G +Y WG +G+LG G K++ + P ++ ++
Sbjct: 227 VAALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGS--KNNLLSPTQI-MVEK 283
Query: 286 EDIVQVS-CGGTH-SVALTRDGHIFSFGR 312
E +++++ C TH S A T+ GH++ +G+
Sbjct: 284 ERVIEIAACHSTHTSAAKTQGGHVYMWGQ 312
Score = 273 (101.2 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 69/208 (33%), Positives = 110/208 (52%)
Query: 165 GDIKQISVPVRVQGL--EQVKLIAVGAF-HNLALQEDGALWAWGNNEYGQLGTGDTQPRS 221
GD + VP +++ L +++K ++ G+ H L EDG ++AWG+N Y QLG G T
Sbjct: 57 GDNQSTLVPKKLEALCGKRIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGI 116
Query: 222 QPIPV-QGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV 280
PI V L +V++A G HS AL DGE++ WG G++G G +++ P+KV
Sbjct: 117 APIQVCTNLLVKQVVEVACGSHHSMALAADGELFAWGYNNCGQVGSGST--ANQPTPRKV 174
Query: 281 -NLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
N L + +V ++CG T S+A+ G ++ +G +G+LG G G + P+ + A
Sbjct: 175 TNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNN---GNQL-TPVRVAAL 230
Query: 340 RNAGDGVDRRWIAKLVACGGRHTLAIVE 367
GV + CG HTLA+ +
Sbjct: 231 H----GV----CVNQIVCGYAHTLALTD 250
Score = 159 (61.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 55/180 (30%), Positives = 80/180 (44%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVC-VVKALEPYKVRSVVAGSRNSLAICDDGKT 59
+A+ + AWG GQ+G G+ + V L KV ++ G +S+A+ D G+
Sbjct: 143 LAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEV 202
Query: 60 K----------------TENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 103
+ P +V AL + Q G H LA+ D+G YAWG N Y
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTY 262
Query: 104 GQCGEEPERKDDTGRILRRDIVIP-QRCAPKLIVRQVAA-GGTH-SVVLTREGHVWTWGQ 160
GQ G TG + +++ P Q K V ++AA TH S T+ GHV+ WGQ
Sbjct: 263 GQLG--------TGS--KNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ 312
Score = 136 (52.9 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 40/120 (33%), Positives = 61/120 (50%)
Query: 247 LTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCG-GTHSVALTRDG 305
+TD EV+ +G LG GDN S +VP+K+ L G+ I +S G G H + T DG
Sbjct: 37 VTDSDEVFVFGLNYSNCLGTGDNQ--STLVPKKLEALCGKRIKSLSYGSGPHVLLSTEDG 94
Query: 306 HIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
++++G + +LG G TT Q + PI + V+ VACG H++A+
Sbjct: 95 VVYAWGHNGYSQLGNG---TTNQGI-APIQVCTNLLVKQVVE-------VACGSHHSMAL 143
>ZFIN|ZDB-GENE-081015-2 [details] [associations]
symbol:rpgrb "retinitis pigmentosa GTPase regulator
b" species:7955 "Danio rerio" [GO:0060287 "epithelial cilium
movement involved in determination of left/right asymmetry"
evidence=IMP] [GO:0060271 "cilium morphogenesis" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-081015-2 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0010842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0060271 GO:GO:0060287
GeneTree:ENSGT00700000104160 EMBL:CR450831 IPI:IPI00798788
RefSeq:XP_685964.5 UniGene:Dr.100975 Ensembl:ENSDART00000088624
GeneID:557752 KEGG:dre:557752 CTD:557752 NextBio:20882140
Bgee:F1QM29 Uniprot:F1QM29
Length = 1413
Score = 320 (117.7 bits), Expect = 2.7e-27, P = 2.7e-27
Identities = 97/322 (30%), Positives = 159/322 (49%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDT 116
G T N P+ V AL + ++ A G H L +G YA GGN GQ G + D T
Sbjct: 71 GTKTTVNKPTCVKALKSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLG-DCNDRT 129
Query: 117 GRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI---KQISV- 172
L + + P ++ +AAG S LT++G ++ WG G I K+ +
Sbjct: 130 SFHL---VEFFNKQGP---IKMLAAGSNTSAALTQDGRLYMWGDN-SEGQIGLGKESNAL 182
Query: 173 -PVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSG 231
P V ++V ++ G +H+ + DGAL+ +G + G+LG + + +P Q ++
Sbjct: 183 TPQEVSVGKRVFWVSCGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQ-VTD 241
Query: 232 LT--LVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIV 289
+ +V +A GG H+ ALT++ EVY +G G+ G+LG G S++ P+ V +
Sbjct: 242 IPDRVVQVACGGGHTVALTEN-EVYSFGLGQFGQLGHGTFIFESRL-PRVVEHFRKGRVK 299
Query: 290 QVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRR 349
+CG H+ +T +G +++FG G HG+LG G + T Q + + PR +D
Sbjct: 300 HAACGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQ-FKPTL---CPRF----LD-- 349
Query: 350 WIAKLVACGGRHTLAIVEWQTE 371
+ V CGG H L + + +TE
Sbjct: 350 YHVHSVTCGGCHMLVLAKPRTE 371
Score = 299 (110.3 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 93/325 (28%), Positives = 157/325 (48%)
Query: 52 AICDDGKTK-TENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEP 110
A+ GK+K +N PS+ L N ++ + G H V + G+ + +G N +GQ G
Sbjct: 14 AVFTFGKSKFADNAPSKF-WLKNDVPLRISCGDEHTALVTENGKLFMFGSNNWGQLGL-- 70
Query: 111 ERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGD 166
T + + + + + V+ A G TH++V T G+++ G GD
Sbjct: 71 ----GTKTTVNKPTCVKALKSER--VKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGD 124
Query: 167 IKQISVPVRVQGLEQ---VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQP 223
+ V+ + +K++A G+ + AL +DG L+ WG+N GQ+G G S
Sbjct: 125 CNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMWGDNSEGQIGLGK---ESNA 181
Query: 224 IPVQGLS-GLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNL 282
+ Q +S G + ++ G +HS +T DG +Y +G + G+LG ++ VPQ+V
Sbjct: 182 LTPQEVSVGKRVFWVSCGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTD 241
Query: 283 LAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNA 342
+ + +VQV+CGG H+VALT + ++SFG G G+LG+G + + V +
Sbjct: 242 IP-DRVVQVACGGGHTVALT-ENEVYSFGLGQFGQLGHGTFIFESRLPRVVEHF------ 293
Query: 343 GDGVDRRWIAKLVACGGRHTLAIVE 367
R+ K ACG HT I +
Sbjct: 294 -----RKGRVKHAACGENHTALITD 313
Score = 224 (83.9 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 84/323 (26%), Positives = 149/323 (46%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAG--------SRNSLAIC---D 55
+ +GS GQLG+G VKAL+ +V+ G SR +L C +
Sbjct: 57 LFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTHTLVFTSRGNLYACGGNN 116
Query: 56 DGKTKTENIPSQVN----ALSNTK--IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 109
+G+ + + + N + I A G A+ GR Y WG N GQ G
Sbjct: 117 EGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMWGDNSEGQIGLG 176
Query: 110 PERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI-- 167
E + + +++ + +R V V+ G HS +T +G ++T+G+ G +
Sbjct: 177 KE----SNALTPQEVSVGKR------VFWVSCGYYHSAFVTVDGALYTFGEK-DSGKLGL 225
Query: 168 --KQIS---VPVRVQGL-EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS 221
++++ VP +V + ++V +A G H +AL E+ ++++G ++GQLG G S
Sbjct: 226 STEKLANHKVPQQVTDIPDRVVQVACGGGHTVALTEN-EVYSFGLGQFGQLGHGTFIFES 284
Query: 222 Q-PIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV 280
+ P V+ + A G H+ +TD+G +Y +G G HG+LG G+ + +++ P
Sbjct: 285 RLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLC 344
Query: 281 NLLAGEDIVQVSCGGTHSVALTR 303
+ V+CGG H + L +
Sbjct: 345 PRFLDYHVHSVTCGGCHMLVLAK 367
Score = 164 (62.8 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 70/269 (26%), Positives = 119/269 (44%)
Query: 3 STTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPY-KVRSVVAGSRNSLAICDDGKTKT 61
S ++ A G +GQLG+G+ +R +V+ ++ + AGS S A+ DG+
Sbjct: 105 SRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYM 164
Query: 62 --ENIPSQV------NALS------NTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 107
+N Q+ NAL+ ++ + G +H V G Y +G + G+ G
Sbjct: 165 WGDNSEGQIGLGKESNALTPQEVSVGKRVFWVSCGYYHSAFVTVDGALYTFGEKDSGKLG 224
Query: 108 EEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG--QPWPPG 165
E+ + ++ ++ IP R V QVA GG H+V LT E V+++G Q G
Sbjct: 225 LSTEKLANH-KVPQQVTDIPDR------VVQVACGGGHTVALT-ENEVYSFGLGQFGQLG 276
Query: 166 D---IKQISVPVRVQGLEQ--VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPR 220
I + +P V+ + VK A G H + ++G L+ +G+ +G+LG G+
Sbjct: 277 HGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLGLGEENFT 336
Query: 221 SQ--PIPVQGLSGLTLVDIAAGGWHSTAL 247
+Q P + + GG H L
Sbjct: 337 NQFKPTLCPRFLDYHVHSVTCGGCHMLVL 365
>ZFIN|ZDB-GENE-090311-16 [details] [associations]
symbol:si:ch211-281g13.4 "si:ch211-281g13.4"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-16 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00923765
RefSeq:NP_001139174.1 UniGene:Dr.150552 Ensembl:ENSDART00000138510
GeneID:794323 NextBio:20931808 Uniprot:B8A4S5
Length = 985
Score = 313 (115.2 bits), Expect = 8.4e-27, P = 8.4e-27
Identities = 89/273 (32%), Positives = 136/273 (49%)
Query: 106 CGEEPE-RKDDTGRILRRD---IVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP 161
CGE+ D G++L D + P + V Q+A G HSV L+ +G ++ WG+
Sbjct: 86 CGEDGAVLLADGGKVLLMDKYTVCRPLKGLDNTKVIQIACGDQHSVALSNDGQLFVWGEN 145
Query: 162 WPPGDI---KQ---ISVPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLG 213
G + K+ I P +Q L + + I+ G H+ L G ++ WG+N GQLG
Sbjct: 146 -AHGQLGLRKEQALIQSPQHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLG 204
Query: 214 TGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSS 273
GDT R P V+ LSG V I+ GG H+ L+ G V+ +G G G+LG N
Sbjct: 205 LGDTTDRFVPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGH--NSLKD 262
Query: 274 KMVPQKVNLLAGEDIVQVSCGGTHSVALTR-DGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
+ P+ V L G + QV+CG H++ L I+SFG G G+LG G +V P+
Sbjct: 263 EHHPRLVAELWGSKVSQVTCGRHHTLVLVALTNRIYSFGCGMQGQLGNGEQVKQSVPL-- 320
Query: 333 PINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
P+ +P N ++ K++A G +H+ A+
Sbjct: 321 PVLLPTDCNCEFTME-----KIIA-GEKHSFAL 347
Score = 302 (111.4 bits), Expect = 1.3e-25, P = 1.3e-25
Identities = 73/196 (37%), Positives = 103/196 (52%)
Query: 176 VQGLEQVKLI--AVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ-PIPVQGLSGL 232
++GL+ K+I A G H++AL DG L+ WG N +GQLG Q Q P +Q L G+
Sbjct: 112 LKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLCGI 171
Query: 233 TLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVS 292
+ I+AGG HS L+ G V+GWG G+LG GD + + VP V L+G+ V +S
Sbjct: 172 PVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDT--TDRFVPTIVKSLSGKKTVSIS 229
Query: 293 CGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIA 352
CGG H+ L++ G +F+FG G G+LG+ P V W +
Sbjct: 230 CGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVA--------------ELWGS 275
Query: 353 KL--VACGGRHTLAIV 366
K+ V CG HTL +V
Sbjct: 276 KVSQVTCGRHHTLVLV 291
Score = 278 (102.9 bits), Expect = 4.7e-23, P = 4.7e-23
Identities = 79/279 (28%), Positives = 129/279 (46%)
Query: 35 LEPYKVRSVVAGSRNSLAICDDGKTKTEN---IPSQVNALSNTKIVQAAIGGWHCLAVDD 91
L+ K+RS+V G ++ + D GK + + + L NTK++Q A G H +A+ +
Sbjct: 76 LKREKIRSIVCGEDGAVLLADGGKVLLMDKYTVCRPLKGLDNTKVIQIACGDQHSVALSN 135
Query: 92 QGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTR 151
G+ + WG N +GQ G RK+ +++ + C + V Q++AGG HS VL+
Sbjct: 136 DGQLFVWGENAHGQLGL---RKEQA--LIQSPQHLQSLCG--IPVAQISAGGNHSFVLSL 188
Query: 152 EGHVWTWGQPWPP----GDIKQISVPVRVQGLEQVKLIAV--GAFHNLALQEDGALWAWG 205
G V+ WG GD VP V+ L K +++ G H L + G ++ +G
Sbjct: 189 SGVVFGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFG 248
Query: 206 NNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTD-DGEVYGWGRGEHGRL 264
+ +GQLG + P V L G + + G H+ L +Y +G G G+L
Sbjct: 249 SGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVLVALTNRIYSFGCGMQGQL 308
Query: 265 GFGDNDKSSKMVPQKVNLLAGEDIV--QVSCGGTHSVAL 301
G G+ K S +P + + ++ G HS AL
Sbjct: 309 GNGEQVKQSVPLPVLLPTDCNCEFTMEKIIAGEKHSFAL 347
>UNIPROTKB|I3LCV3 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 OMA:NCSNCLG
EMBL:FP325140 Ensembl:ENSSSCT00000023143 Uniprot:I3LCV3
Length = 560
Score = 304 (112.1 bits), Expect = 2.0e-26, P = 2.0e-26
Identities = 85/287 (29%), Positives = 141/287 (49%)
Query: 87 LAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAG-GTH 145
L V D + +G N Y C D+ ++ + + C K ++ ++ G G H
Sbjct: 64 LYVTDNDEVFVFGLN-YSNC---LGTGDNQSTLVPKKL--EALCGKK--IKSLSYGSGPH 115
Query: 146 SVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQG---LEQVKLIAVGAFHNLALQED 198
++ T +G V+ WG G Q P++V ++QV +A G+ H++AL D
Sbjct: 116 VLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAAD 175
Query: 199 GALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLT-LVDIAAGGWHSTALTDDGEVYGWG 257
G ++AWG N GQ+G+G T + P V + +V IA G S A+ D+GEVYGWG
Sbjct: 176 GEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWG 235
Query: 258 RGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGR 317
+G+LG G+N +++ P +V L + Q+ CG H++ALT +G ++++G +G+
Sbjct: 236 YNGNGQLGLGNN--GNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 293
Query: 318 LGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLA 364
LG G K P + V++ + ++ AC HT A
Sbjct: 294 LGTGNKNNLLSPAHIM------------VEKERVVEIAACHSAHTSA 328
Score = 300 (110.7 bits), Expect = 5.5e-26, P = 5.5e-26
Identities = 79/269 (29%), Positives = 132/269 (49%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIG-GWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDD 115
G ++ +P ++ AL KI + G G H L + G YAWG N Y Q G +
Sbjct: 86 GDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQG- 144
Query: 116 TGRILRRDIVIPQRCAPKLIVRQV---AAGGTHSVVLTREGHVWTWGQ----PWPPGDIK 168
+ P + L+++QV A G HS+ L +G V+ WG G
Sbjct: 145 ---------IAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTA 195
Query: 169 QISVPVRVQG---LEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIP 225
P +V +++V IA G ++A+ ++G ++ WG N GQLG G+ + P+
Sbjct: 196 NQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVR 255
Query: 226 VQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAG 285
V L + + I G H+ ALTD+G +Y WG +G+LG G+ K++ + P + ++
Sbjct: 256 VAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGN--KNNLLSPAHI-MVEK 312
Query: 286 EDIVQVS-CGGTH-SVALTRDGHIFSFGR 312
E +V+++ C H S A T+ GH++ +G+
Sbjct: 313 ERVVEIAACHSAHTSAAKTQGGHVYMWGQ 341
Score = 275 (101.9 bits), Expect = 3.0e-23, P = 3.0e-23
Identities = 79/265 (29%), Positives = 132/265 (49%)
Query: 115 DTGRILRRDIVIPQRCAPKLIVRQVAAGGT---HSVVLTREGHVWTWGQPWP----PGDI 167
D G+ ++ PQ A +R+ GT ++ +T V+ +G + GD
Sbjct: 32 DVGKWPIFTLLSPQEIAS---IRKACVFGTSANEALYVTDNDEVFVFGLNYSNCLGTGDN 88
Query: 168 KQISVPVRVQGL--EQVKLIAVGAF-HNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPI 224
+ VP +++ L +++K ++ G+ H L EDG ++AWG+N Y QLG G T PI
Sbjct: 89 QSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPI 148
Query: 225 PV-QGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV-NL 282
V L +V++A G HS AL DGEV+ WG G++G G +++ P+KV N
Sbjct: 149 QVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGST--ANQPTPRKVTNC 206
Query: 283 LAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNA 342
L + +V ++CG T S+A+ +G ++ +G +G+LG G G + P+ + A +
Sbjct: 207 LHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNN---GNQL-TPVRVAALHSV 262
Query: 343 GDGVDRRWIAKLVACGGRHTLAIVE 367
+ CG HTLA+ +
Sbjct: 263 --------CVNQIVCGYAHTLALTD 279
>UNIPROTKB|Q8NDN9 [details] [associations]
symbol:RCBTB1 "RCC1 and BTB domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 EMBL:AL139321 EMBL:AF334406
EMBL:AJ319660 EMBL:AK096654 EMBL:AL833821 EMBL:BC038104
IPI:IPI00329626 IPI:IPI00973193 RefSeq:NP_060661.3
UniGene:Hs.508021 ProteinModelPortal:Q8NDN9 SMR:Q8NDN9
IntAct:Q8NDN9 MINT:MINT-4718485 STRING:Q8NDN9 PhosphoSite:Q8NDN9
DMDM:74751227 PRIDE:Q8NDN9 DNASU:55213 Ensembl:ENST00000258646
Ensembl:ENST00000378302 Ensembl:ENST00000546015 GeneID:55213
KEGG:hsa:55213 UCSC:uc001vde.1 CTD:55213 GeneCards:GC13M050106
HGNC:HGNC:18243 HPA:HPA045925 MIM:607867 neXtProt:NX_Q8NDN9
PharmGKB:PA134955699 HOGENOM:HOG000065752 HOVERGEN:HBG053261
InParanoid:Q8NDN9 KO:K11494 OMA:NCSNCLG OrthoDB:EOG4MSCXX
PhylomeDB:Q8NDN9 GenomeRNAi:55213 NextBio:59164 ArrayExpress:Q8NDN9
Bgee:Q8NDN9 CleanEx:HS_RCBTB1 Genevestigator:Q8NDN9
GermOnline:ENSG00000136144 Uniprot:Q8NDN9
Length = 531
Score = 303 (111.7 bits), Expect = 2.1e-26, P = 2.1e-26
Identities = 86/287 (29%), Positives = 141/287 (49%)
Query: 87 LAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAG-GTH 145
L V D + +G N Y C D+ ++ + + C K ++ ++ G G H
Sbjct: 35 LYVTDNDEVFVFGLN-YSNC---LGTGDNQSTLVPKKL--EGLCGKK--IKSLSYGSGPH 86
Query: 146 SVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQG---LEQVKLIAVGAFHNLALQED 198
++ T +G V+ WG G Q PV+V ++QV +A G+ H++AL D
Sbjct: 87 VLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAAD 146
Query: 199 GALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLT-LVDIAAGGWHSTALTDDGEVYGWG 257
G ++AWG N GQ+G+G T + P V + +V IA G S A+ D+GEVYGWG
Sbjct: 147 GEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWG 206
Query: 258 RGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGR 317
+G+LG G+N +++ P +V L + Q+ CG H++ALT +G ++++G +G+
Sbjct: 207 YNGNGQLGLGNN--GNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 318 LGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLA 364
LG G K P + V++ + ++ AC HT A
Sbjct: 265 LGTGNKNNLLSPAHIM------------VEKERVVEIAACHSAHTSA 299
Score = 295 (108.9 bits), Expect = 1.6e-25, P = 1.6e-25
Identities = 78/269 (28%), Positives = 129/269 (47%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIG-GWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDD 115
G ++ +P ++ L KI + G G H L + G YAWG N Y Q G +
Sbjct: 57 GDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQG- 115
Query: 116 TGRILRRDIVIPQRCAPKLIVRQV---AAGGTHSVVLTREGHVWTWGQ----PWPPGDIK 168
+ P + L+++QV A G HS+ L +G V+ WG G
Sbjct: 116 ---------IAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTA 166
Query: 169 QISVPVRVQGLEQVKL---IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIP 225
P +V +K IA G ++A+ ++G ++ WG N GQLG G+ + P+
Sbjct: 167 NQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVR 226
Query: 226 VQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAG 285
V L + + I G H+ ALTD+G +Y WG +G+LG G+ K++ + P + ++
Sbjct: 227 VAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGN--KNNLLSPAHI-MVEK 283
Query: 286 EDIVQVS-CGGTH-SVALTRDGHIFSFGR 312
E +V+++ C H S A T+ GH++ +G+
Sbjct: 284 ERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312
Score = 278 (102.9 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 79/265 (29%), Positives = 133/265 (50%)
Query: 115 DTGRILRRDIVIPQRCAPKLIVRQVAAGGT---HSVVLTREGHVWTWGQPWP----PGDI 167
D G+ ++ PQ A +R+ GT ++ +T V+ +G + GD
Sbjct: 3 DVGKWPIFTLLSPQEIAS---IRKACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDN 59
Query: 168 KQISVPVRVQGL--EQVKLIAVGAF-HNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPI 224
+ VP +++GL +++K ++ G+ H L EDG ++AWG+N Y QLG G T P+
Sbjct: 60 QSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPV 119
Query: 225 PV-QGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV-NL 282
V L +V++A G HS AL DGEV+ WG G++G G +++ P+KV N
Sbjct: 120 QVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGST--ANQPTPRKVTNC 177
Query: 283 LAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNA 342
L + +V ++CG T S+A+ +G ++ +G +G+LG G G + P+ + A +
Sbjct: 178 LHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNN---GNQL-TPVRVAALHSV 233
Query: 343 GDGVDRRWIAKLVACGGRHTLAIVE 367
+ CG HTLA+ +
Sbjct: 234 --------CVNQIVCGYAHTLALTD 250
Score = 149 (57.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 50/180 (27%), Positives = 77/180 (42%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVC-VVKALEPYKVRSVVAGSRNSLAICDDGKT 59
+A+ + AWG GQ+G G+ + V L +V + G +S+A+ D+G+
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEV 202
Query: 60 K----------------TENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 103
+ P +V AL + + Q G H LA+ D+G YAWG N Y
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTY 262
Query: 104 GQCGEEPERKDDTGRILRRDIVIPQRCA--PKLIVRQVAAGGTH-SVVLTREGHVWTWGQ 160
GQ G TG + +++ P + +V A H S T+ GHV+ WGQ
Sbjct: 263 GQLG--------TGN--KNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312
>UNIPROTKB|F1PV11 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
EMBL:AAEX03013105 RefSeq:XP_542558.2 Ensembl:ENSCAFT00000006979
GeneID:485440 KEGG:cfa:485440 Uniprot:F1PV11
Length = 531
Score = 303 (111.7 bits), Expect = 2.1e-26, P = 2.1e-26
Identities = 85/287 (29%), Positives = 141/287 (49%)
Query: 87 LAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAG-GTH 145
L V D + +G N Y C D+ ++ + + C K ++ ++ G G H
Sbjct: 35 LYVTDNDEVFVFGLN-YSNC---LGTGDNQSTLVPKKL--EALCGKK--IKSLSYGSGPH 86
Query: 146 SVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQG---LEQVKLIAVGAFHNLALQED 198
++ T +G V+ WG G Q P++V ++QV +A G+ H++AL D
Sbjct: 87 VLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAAD 146
Query: 199 GALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLT-LVDIAAGGWHSTALTDDGEVYGWG 257
G ++AWG N GQ+G+G T + P V + +V IA G S A+ D+GEVYGWG
Sbjct: 147 GEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWG 206
Query: 258 RGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGR 317
+G+LG G+N +++ P +V L + Q+ CG H++ALT +G ++++G +G+
Sbjct: 207 YNGNGQLGLGNN--GNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 318 LGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLA 364
LG G K P + V++ + ++ AC HT A
Sbjct: 265 LGTGNKNNLLSPAHIM------------VEKERVVEIAACHSAHTSA 299
Score = 298 (110.0 bits), Expect = 7.4e-26, P = 7.4e-26
Identities = 79/269 (29%), Positives = 130/269 (48%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIG-GWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDD 115
G ++ +P ++ AL KI + G G H L + G YAWG N Y Q G +
Sbjct: 57 GDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQG- 115
Query: 116 TGRILRRDIVIPQRCAPKLIVRQV---AAGGTHSVVLTREGHVWTWGQ----PWPPGDIK 168
+ P + L+++QV A G HS+ L +G V+ WG G
Sbjct: 116 ---------IAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTT 166
Query: 169 QISVPVRVQGLEQVKL---IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIP 225
P +V +K IA G ++A+ ++G ++ WG N GQLG G+ + P+
Sbjct: 167 NQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVR 226
Query: 226 VQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAG 285
V L + + I G H+ ALTD+G +Y WG +G+LG G+ K++ + P + ++
Sbjct: 227 VAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGN--KNNLLSPAHI-MVEK 283
Query: 286 EDIVQVS-CGGTH-SVALTRDGHIFSFGR 312
E +V+++ C H S A T+ GH++ +G+
Sbjct: 284 ERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312
Score = 273 (101.2 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 79/265 (29%), Positives = 132/265 (49%)
Query: 115 DTGRILRRDIVIPQRCAPKLIVRQVAAGGT---HSVVLTREGHVWTWGQPWP----PGDI 167
D G+ ++ PQ A +R+ GT ++ +T V+ +G + GD
Sbjct: 3 DVGKWPIFTLLSPQEIAS---IRKACVFGTSANEALYVTDNDEVFVFGLNYSNCLGTGDN 59
Query: 168 KQISVPVRVQGL--EQVKLIAVGAF-HNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPI 224
+ VP +++ L +++K ++ G+ H L EDG ++AWG+N Y QLG G T PI
Sbjct: 60 QSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPI 119
Query: 225 PV-QGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV-NL 282
V L +V++A G HS AL DGEV+ WG G++G G +++ P+KV N
Sbjct: 120 QVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGST--TNQPTPRKVTNC 177
Query: 283 LAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNA 342
L + +V ++CG T S+A+ +G ++ +G +G+LG G G + P+ + A +
Sbjct: 178 LHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNN---GNQL-TPVRVAALHSV 233
Query: 343 GDGVDRRWIAKLVACGGRHTLAIVE 367
+ CG HTLA+ +
Sbjct: 234 --------CVNQIVCGYAHTLALTD 250
Score = 149 (57.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 50/180 (27%), Positives = 77/180 (42%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVC-VVKALEPYKVRSVVAGSRNSLAICDDGKT 59
+A+ + AWG GQ+G G+ + V L +V + G +S+A+ D+G+
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEV 202
Query: 60 K----------------TENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 103
+ P +V AL + + Q G H LA+ D+G YAWG N Y
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTY 262
Query: 104 GQCGEEPERKDDTGRILRRDIVIPQRCA--PKLIVRQVAAGGTH-SVVLTREGHVWTWGQ 160
GQ G TG + +++ P + +V A H S T+ GHV+ WGQ
Sbjct: 263 GQLG--------TGN--KNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312
>ZFIN|ZDB-GENE-090311-56 [details] [associations]
symbol:si:ch73-190m4.1 "si:ch73-190m4.1"
species:7955 "Danio rerio" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090311-56
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:CR788312 EMBL:CU467858 IPI:IPI00933554 RefSeq:XP_688463.5
UniGene:Dr.113692 UniGene:Dr.113776 Ensembl:ENSDART00000111114
GeneID:559981 KEGG:dre:559981 NextBio:20883233 Uniprot:F1RDE7
Length = 992
Score = 308 (113.5 bits), Expect = 2.9e-26, P = 2.9e-26
Identities = 94/275 (34%), Positives = 133/275 (48%)
Query: 106 CGEEPE-RKDDTGRILRRDIVIPQRCAP-KLI----VRQVAAGGTHSVVLTREGHVWTWG 159
CGE DD G++L D C+P K + V Q+A G HS+ LT +G ++ WG
Sbjct: 86 CGEYGAVLLDDGGKVLIMDK--STECSPLKGLENRQVIQIACGDQHSMALTNDGQLFVWG 143
Query: 160 QPWPPGDI----KQISV--PVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQ 211
+ G + +Q P +Q L + + I+ G H+ L G ++ WG N GQ
Sbjct: 144 EN-ALGQLGLRKEQAGTQSPRHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGGNSAGQ 202
Query: 212 LGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDK 271
LG GDT R P V L +V I+ GG H+ AL G V+ +G G G+LG N
Sbjct: 203 LGLGDTTDRFVPTVVNSLKRKKIVSISCGGEHTAALAKGGTVFTFGSGGFGQLGH--NSF 260
Query: 272 SSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGH-IFSFGRGDHGRLGYGRKVTTGQPM 330
+ P+ V L G + QV+CG H++ T I+SFG G G+LG G +V P+
Sbjct: 261 KDEHHPRLVAELWGSKVSQVTCGRNHTLVSTASPKLIYSFGCGMQGQLGNGEQVKQSVPL 320
Query: 331 EVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
P++ P N D I KLVA G H+ A+
Sbjct: 321 --PVDQPTEYN-----DEYTIQKLVA-GENHSFAL 347
Score = 268 (99.4 bits), Expect = 5.5e-21, P = 5.5e-21
Identities = 83/281 (29%), Positives = 129/281 (45%)
Query: 35 LEPYKVRSVVAGSRNSLAICDDGKT-----KTENIPSQVNALSNTKIVQAAIGGWHCLAV 89
L+ +R +V G ++ + D GK TE P + L N +++Q A G H +A+
Sbjct: 76 LKKNTIRLIVCGEYGAVLLDDGGKVLIMDKSTECSP--LKGLENRQVIQIACGDQHSMAL 133
Query: 90 DDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVL 149
+ G+ + WG N GQ G RK+ G R + C + V Q++AGG HS VL
Sbjct: 134 TNDGQLFVWGENALGQLGL---RKEQAGTQSPRHL--QSLCG--IPVAQISAGGNHSFVL 186
Query: 150 TREGHVWTWGQPWPP----GDIKQISVPVRVQGLEQVKLIAV--GAFHNLALQEDGALWA 203
+ G V+ WG GD VP V L++ K++++ G H AL + G ++
Sbjct: 187 SLSGVVFGWGGNSAGQLGLGDTTDRFVPTVVNSLKRKKIVSISCGGEHTAALAKGGTVFT 246
Query: 204 WGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGE-VYGWGRGEHG 262
+G+ +GQLG + P V L G + + G H+ T + +Y +G G G
Sbjct: 247 FGSGGFGQLGHNSFKDEHHPRLVAELWGSKVSQVTCGRNHTLVSTASPKLIYSFGCGMQG 306
Query: 263 RLGFGDNDKSSKMVP--QKVNLLAGEDIVQVSCGGTHSVAL 301
+LG G+ K S +P Q I ++ G HS AL
Sbjct: 307 QLGNGEQVKQSVPLPVDQPTEYNDEYTIQKLVAGENHSFAL 347
Score = 200 (75.5 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 47/146 (32%), Positives = 76/146 (52%)
Query: 225 PVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLA 284
P++GL ++ IA G HS ALT+DG+++ WG G+LG +++ P+ + L
Sbjct: 111 PLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLR-KEQAGTQSPRHLQSLC 169
Query: 285 GEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGD 344
G + Q+S GG HS L+ G +F +G G+LG G TT + + +N
Sbjct: 170 GIPVAQISAGGNHSFVLSLSGVVFGWGGNSAGQLGLGD--TTDRFVPTVVN--------- 218
Query: 345 GVDRRWIAKLVACGGRHTLAIVEWQT 370
+ R+ I ++CGG HT A+ + T
Sbjct: 219 SLKRKKIVS-ISCGGEHTAALAKGGT 243
>RGD|1563497 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide exchange
factor" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA;ISO] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA;ISO] InterPro:IPR027048 RGD:1563497
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 OrthoDB:EOG4J1183
PANTHER:PTHR22870:SF7 IPI:IPI00360920 Ensembl:ENSRNOT00000015352
UCSC:RGD:1563497 Uniprot:D3ZN16
Length = 339
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 96/306 (31%), Positives = 145/306 (47%)
Query: 30 CVVKALEPYKVRSVVAGSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIGGW-HCLA 88
C +A+ V + A NS G + +P Q++ + +++ GG H +
Sbjct: 6 CASEAVSAAAV--LFAWGANSYGQLGLGHKEDVLLPQQLSDFCKSGCIKSVTGGGGHSVV 63
Query: 89 VDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVV 148
V D G + G N+ GQ G T +LR I P P +RQVA G +++
Sbjct: 64 VTDGGGLFVCGLNKDGQLG-----LGHTEEVLRFTICKPLLGCP---IRQVACGWDFTIM 115
Query: 149 LTREGHVWT-----WGQPWPPGDIKQISVPVRVQGL-EQVKLIAVGAFHNLALQEDGALW 202
LT +G V + +GQ P ++ VP ++ L E+V +A G H LA + G+ +
Sbjct: 116 LTEKGQVLSCGSNAFGQLGVPHGPRKCVVPQAIECLREKVVCVAAGLRHALATTDTGSTF 175
Query: 203 AWGNN--EYGQ-LGTGDTQP----RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYG 255
WG G+ L G P +P V GL T+V AG HS +LTD GE+Y
Sbjct: 176 QWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLESSTVVCAVAGSDHSASLTDTGELYV 235
Query: 256 WGRGEHGRLGFGDNDKSSKMVPQKV--NLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRG 313
WGR +HG+L + + +PQ+V + E + V G TH VA T G +F++GR
Sbjct: 236 WGRNKHGQLA---SLATFLPLPQRVEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRA 292
Query: 314 DHGRLG 319
D+G+LG
Sbjct: 293 DYGQLG 298
Score = 134 (52.2 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 58/208 (27%), Positives = 86/208 (41%)
Query: 28 WVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIGGWHCL 87
W + E +V S + + L + G K +P + L K+V A G H L
Sbjct: 110 WDFTIMLTEKGQVLSCGSNAFGQLGV-PHGPRKCV-VPQAIECLRE-KVVCVAAGLRHAL 166
Query: 88 AVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVI--PQRCA---PKLIVRQVAAG 142
A D G + WG G R+ G+ L + P R +V VA G
Sbjct: 167 ATTDTGSTFQWGTG-LASSG----RRLCPGQNLPLFLTAKEPSRVTGLESSTVVCAVA-G 220
Query: 143 GTHSVVLTREGHVWTWGQPWPPGDIKQIS----VPVRVQG--LEQVKLIAV--GAFHNLA 194
HS LT G ++ WG+ G + ++ +P RV+ + K+ AV G H +A
Sbjct: 221 SDHSASLTDTGELYVWGRN-KHGQLASLATFLPLPQRVEAHYFQDEKVTAVWSGWTHLVA 279
Query: 195 LQEDGALWAWGNNEYGQLGTGDTQPRSQ 222
E G ++ WG +YGQLG P +Q
Sbjct: 280 KTETGKVFTWGRADYGQLGRTLGSPEAQ 307
>UNIPROTKB|E1BKF7 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494
OMA:NCSNCLG EMBL:DAAA02032915 EMBL:DAAA02032914 IPI:IPI00826911
RefSeq:NP_001178141.1 UniGene:Bt.22187 Ensembl:ENSBTAT00000035796
GeneID:785222 KEGG:bta:785222 NextBio:20927167 Uniprot:E1BKF7
Length = 531
Score = 301 (111.0 bits), Expect = 3.4e-26, P = 3.4e-26
Identities = 85/287 (29%), Positives = 141/287 (49%)
Query: 87 LAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAG-GTH 145
L V D + +G N Y C D+ ++ + + C K ++ ++ G G H
Sbjct: 35 LYVTDSDEVFVFGLN-YSSC---LGTGDNHSTLVPKKL--EALCGKK--IKSLSYGSGPH 86
Query: 146 SVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQG---LEQVKLIAVGAFHNLALQED 198
++ T +G V+ WG G Q P++V ++QV +A G+ H++AL D
Sbjct: 87 VLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAAD 146
Query: 199 GALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLT-LVDIAAGGWHSTALTDDGEVYGWG 257
G ++AWG N GQ+G+G T + P V + +V IA G S A+ D+GEVYGWG
Sbjct: 147 GEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWG 206
Query: 258 RGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGR 317
+G+LG G+N +++ P +V L + Q+ CG H++ALT +G ++++G +G+
Sbjct: 207 YNGNGQLGLGNN--GNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 318 LGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLA 364
LG G K P + V++ + ++ AC HT A
Sbjct: 265 LGTGNKNNLLSPAHIM------------VEKERVIEIAACHSAHTSA 299
Score = 293 (108.2 bits), Expect = 2.6e-25, P = 2.6e-25
Identities = 78/266 (29%), Positives = 129/266 (48%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIG-GWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDD 115
G + +P ++ AL KI + G G H L + G YAWG N Y Q G +
Sbjct: 57 GDNHSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGL 116
Query: 116 TGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQIS 171
+ +++I Q V +VA G HS+ L +G V+ WG G
Sbjct: 117 APIQVCTNLLIKQ-------VVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQP 169
Query: 172 VPVRVQGLEQVKL---IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQG 228
P +V +K IA G ++A+ ++G ++ WG N GQLG G+ + P+ V
Sbjct: 170 TPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAA 229
Query: 229 LSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDI 288
L + + I G H+ ALTD+G +Y WG +G+LG G+ K++ + P + ++ E +
Sbjct: 230 LHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGN--KNNLLSPAHI-MVEKERV 286
Query: 289 VQVS-CGGTH-SVALTRDGHIFSFGR 312
++++ C H S A T+ GH++ +G+
Sbjct: 287 IEIAACHSAHTSAAKTQGGHVYMWGQ 312
Score = 268 (99.4 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 74/244 (30%), Positives = 123/244 (50%)
Query: 136 VRQVAAGGT---HSVVLTREGHVWTWGQPWPP----GDIKQISVPVRVQGL--EQVKLIA 186
+R+ GT ++ +T V+ +G + GD VP +++ L +++K ++
Sbjct: 21 IRKACVFGTSANEALYVTDSDEVFVFGLNYSSCLGTGDNHSTLVPKKLEALCGKKIKSLS 80
Query: 187 VGAF-HNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPV-QGLSGLTLVDIAAGGWHS 244
G+ H L EDG ++AWG+N Y QLG G T PI V L +V++A G HS
Sbjct: 81 YGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHS 140
Query: 245 TALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV-NLLAGEDIVQVSCGGTHSVALTR 303
AL DGEV+ WG G++G G +++ P+KV N L + +V ++CG T S+A+
Sbjct: 141 MALAADGEVFAWGYNNCGQVGSGST--ANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLD 198
Query: 304 DGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTL 363
+G ++ +G +G+LG G G + P+ + A + + CG HTL
Sbjct: 199 NGEVYGWGYNGNGQLGLGNN---GNQL-TPVRVAALHSV--------CVNQIVCGYAHTL 246
Query: 364 AIVE 367
A+ +
Sbjct: 247 ALTD 250
Score = 207 (77.9 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 56/207 (27%), Positives = 98/207 (47%)
Query: 162 WPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS 221
WP I + P + + + + A L + + ++ +G N LGTGD
Sbjct: 7 WP---IFTLLSPHEIASIRKACVFGTSANEALYVTDSDEVFVFGLNYSSCLGTGDNHSTL 63
Query: 222 QPIPVQGLSGLTLVDIAAG-GWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV 280
P ++ L G + ++ G G H T+DG VY WG + +LG G ++ +
Sbjct: 64 VPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCT 123
Query: 281 NLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPR 340
NLL + +V+V+CG HS+AL DG +F++G + G++G G T QP PR
Sbjct: 124 NLLI-KQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGS--TANQP--------TPR 172
Query: 341 NAGDGVDRRWIAKLVACGGRHTLAIVE 367
+ + + + +ACG ++A+++
Sbjct: 173 KVTNCLHIKRVVG-IACGQTSSMAVLD 198
Score = 149 (57.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 52/180 (28%), Positives = 79/180 (43%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVC-VVKALEPYKVRSVVAGSRNSLAICDDGKT 59
+A+ + AWG GQ+G G+ + V L +V + G +S+A+ D+G+
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEV 202
Query: 60 K----------------TENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 103
+ P +V AL + + Q G H LA+ D+G YAWG N Y
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTY 262
Query: 104 GQCGEEPERKDDTGRILRRDIVIPQRC-APKLIVRQVAA-GGTH-SVVLTREGHVWTWGQ 160
GQ G TG + +++ P K V ++AA H S T+ GHV+ WGQ
Sbjct: 263 GQLG--------TGN--KNNLLSPAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWGQ 312
>TAIR|locus:504956339 [details] [associations]
symbol:RUG1 "AT5G08710" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
EMBL:BT005498 EMBL:AK118882 IPI:IPI00533904 RefSeq:NP_680156.2
UniGene:At.45869 ProteinModelPortal:Q8GWF2 SMR:Q8GWF2 PRIDE:Q8GWF2
EnsemblPlants:AT5G08710.1 GeneID:830771 KEGG:ath:AT5G08710
TAIR:At5g08710 HOGENOM:HOG000006005 InParanoid:Q8GWF2 OMA:HSACIDE
PhylomeDB:Q8GWF2 ProtClustDB:CLSN2690903 Genevestigator:Q8GWF2
Uniprot:Q8GWF2
Length = 434
Score = 295 (108.9 bits), Expect = 4.1e-26, P = 4.1e-26
Identities = 91/295 (30%), Positives = 132/295 (44%)
Query: 91 DQGRAYA--WGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVV 148
+ G+ +A WG +YG+ G G + + + VA GG H++
Sbjct: 45 ESGKRFAAMWGSGDYGRLG--------LGNLDSQWTPAVCSALSDHSITAVACGGAHTLF 96
Query: 149 LTREGHVWTWGQ----PWPPGDIKQISV-PVRVQGLEQVKL-IAVGAFHNLALQEDGALW 202
LT V+ G D+K ++ P+ V GL++ L I+ G +H+ A+ DG L+
Sbjct: 97 LTETRRVFATGLNDCGQLGVSDVKSHAMDPLEVSGLDKDILHISAGYYHSAAITVDGELY 156
Query: 203 AWGNNEYGQLGTGDTQPRSQPIP--VQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGE 260
WG N GQLG G R +P V+ L G+T+ +A G HS A+TD GEV WG G
Sbjct: 157 MWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTDGGEVLSWGGGG 216
Query: 261 HGRLGFGDNDK-------SSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRG 313
GRLG G +S+ P+ + L G + V+ G HS +G F FG
Sbjct: 217 SGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDENGSAFMFGEK 276
Query: 314 DHGRLGYG--RKVTTGQPM-EVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
++G+G R TT + EVP A+ VACGG HT +
Sbjct: 277 SINKMGFGGVRNATTPSIISEVPY-----------------AEEVACGGYHTCVV 314
Score = 272 (100.8 bits), Expect = 4.1e-25, Sum P(2) = 4.1e-25
Identities = 89/324 (27%), Positives = 145/324 (44%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P +V+ L I+ + G +H A+ G Y WG N GQ G G+ R +
Sbjct: 126 PLEVSGLDKD-ILHISAGYYHSAAITVDGELYMWGKNSSGQLG--------LGKKAARVV 176
Query: 125 VIPQRCAPK--LIVRQVAAGGTHSVVLTREGHVWTWG-----------QPWPPGDIKQIS 171
+P + + ++ VA G HSV +T G V +WG Q G ++ S
Sbjct: 177 RVPTKVEALHGITIQSVALGSEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNS 236
Query: 172 --VPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQ 227
P ++ LE +K+ +A G H+ E+G+ + +G ++G G + + P +
Sbjct: 237 EFTPRLIKELEGIKVTNVAAGLLHSACTDENGSAFMFGEKSINKMGFGGVRNATTPSIIS 296
Query: 228 GLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGED 287
+ ++A GG+H+ +T GE+Y WG E+G LG S V + L
Sbjct: 297 EVPYAE--EVACGGYHTCVVTRGGELYTWGSNENGCLGTDSTYVSHSPVRVEGPFLEST- 353
Query: 288 IVQVSCGGTHSVALTRDGHIFSFG-RGDHGRL---GYGRKVTTGQPMEVPINIPAPRNAG 343
+ QVSCG H+ A++ D ++F++G G HG G+ G +V PA + G
Sbjct: 354 VSQVSCGWKHTAAIS-DNNVFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYARPAMVDLG 412
Query: 344 DGVDRRWIAKLVACGGRHTLAIVE 367
V A ++CG HT A++E
Sbjct: 413 KNVR----AVHISCGFNHTAAVLE 432
Score = 252 (93.8 bits), Expect = 3.8e-21, Sum P(2) = 3.8e-21
Identities = 78/275 (28%), Positives = 117/275 (42%)
Query: 48 RNSLAICDDGK--TKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQ 105
+NS GK + +P++V AL I A+G H +AV D G +WGG G+
Sbjct: 160 KNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTDGGEVLSWGGGGSGR 219
Query: 106 CGEEPERKDDTGRILRRDIVIPQRCAPKLI---VRQVAAGGTHSVVLTREGHVWTWGQP- 161
G + ILR + R +L V VAAG HS G + +G+
Sbjct: 220 LGHG--HQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDENGSAFMFGEKS 277
Query: 162 ---WPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQ 218
G ++ + P + + + +A G +H + G L+ WG+NE G LGT T
Sbjct: 278 INKMGFGGVRNATTPSIISEVPYAEEVACGGYHTCVVTRGGELYTWGSNENGCLGTDSTY 337
Query: 219 PRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWG-RGEHG-----------RLGF 266
P+ V+G + V + GW TA D V+ WG G HG +LG
Sbjct: 338 VSHSPVRVEGPFLESTVSQVSCGWKHTAAISDNNVFTWGWGGSHGTFSVDGHSSGGQLGH 397
Query: 267 GDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVAL 301
G + ++ P V+L V +SCG H+ A+
Sbjct: 398 GSDVDYAR--PAMVDLGKNVRAVHISCGFNHTAAV 430
Score = 224 (83.9 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 66/212 (31%), Positives = 107/212 (50%)
Query: 167 IKQISVPV-RVQG-------LEQVKLIAVGAF-HNLALQEDGALWA--WGNNEYGQLGTG 215
I ++ +PV R+QG L+ KL +G E G +A WG+ +YG+LG G
Sbjct: 6 IGRVRIPVSRIQGSNCTSGLLKDSKLGPIGVCCSRWVSSESGKRFAAMWGSGDYGRLGLG 65
Query: 216 DTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKM 275
+ + P LS ++ +A GG H+ LT+ V+ G + G+LG D KS M
Sbjct: 66 NLDSQWTPAVCSALSDHSITAVACGGAHTLFLTETRRVFATGLNDCGQLGVSDV-KSHAM 124
Query: 276 VPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPIN 335
P +V+ L +DI+ +S G HS A+T DG ++ +G+ G+LG G+K + + VP
Sbjct: 125 DPLEVSGL-DKDILHISAGYYHSAAITVDGELYMWGKNSSGQLGLGKKAA--RVVRVPTK 181
Query: 336 IPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
+ A G+ + VA G H++A+ +
Sbjct: 182 VEALH----GIT----IQSVALGSEHSVAVTD 205
Score = 146 (56.5 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 46/169 (27%), Positives = 76/169 (44%)
Query: 10 WGSGEDGQLGIGNNEEREWV-CVVKALEPYKVRSVVAGSRNSLAIC-----------DDG 57
WGSG+ G+LG+GN + +W V AL + + +V G ++L + D G
Sbjct: 54 WGSGDYGRLGLGNLDS-QWTPAVCSALSDHSITAVACGGAHTLFLTETRRVFATGLNDCG 112
Query: 58 KTKTENIPSQ-VNALS----NTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPER 112
+ ++ S ++ L + I+ + G +H A+ G Y WG N GQ G
Sbjct: 113 QLGVSDVKSHAMDPLEVSGLDKDILHISAGYYHSAAITVDGELYMWGKNSSGQLG----- 167
Query: 113 KDDTGRILRRDIVIPQRCAPK--LIVRQVAAGGTHSVVLTREGHVWTWG 159
G+ R + +P + + ++ VA G HSV +T G V +WG
Sbjct: 168 ---LGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTDGGEVLSWG 213
Score = 47 (21.6 bits), Expect = 4.1e-25, Sum P(2) = 4.1e-25
Identities = 16/59 (27%), Positives = 28/59 (47%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCV-VKALEPYKVRSVVAGSRNSLAICDDGK 58
+ T + A G + GQLG+ + + + V L+ + + AG +S AI DG+
Sbjct: 97 LTETRRVFATGLNDCGQLGVSDVKSHAMDPLEVSGLDK-DILHISAGYYHSAAITVDGE 154
>UNIPROTKB|F1N1N9 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050688 "regulation of defense response to virus"
evidence=IEA] [GO:0042296 "ISG15 ligase activity" evidence=IEA]
[GO:0032020 "ISG15-protein conjugation" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050688 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT GO:GO:0042296
GO:GO:0032020 EMBL:DAAA02017014 IPI:IPI00907336
Ensembl:ENSBTAT00000052811 Uniprot:F1N1N9
Length = 959
Score = 305 (112.4 bits), Expect = 5.8e-26, P = 5.8e-26
Identities = 75/244 (30%), Positives = 122/244 (50%)
Query: 138 QVAAGGTHSVVLTREGHVWTWGQPWPP----GDI-KQISVPVRVQGLEQVKLIAV--GAF 190
Q+ G HS+ L++ G ++ WGQ G I S P V+ L V L+ + G
Sbjct: 152 QITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGEA 211
Query: 191 HNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDD 250
H++AL G +++WG N+ GQLG G T + P ++ L + +A GG H+ LT
Sbjct: 212 HSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALLTKS 271
Query: 251 GEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRD-GHIFS 309
G V+ +G G++G+LG N +++ P+ V L G + Q++CG H++A D G +FS
Sbjct: 272 GLVFTFGDGKYGQLGH--NSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDTGKVFS 329
Query: 310 FGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVEWQ 369
FG G G+LG G T Q + P+ + + ++ GG ++ I W
Sbjct: 330 FGSGKEGQLGNGG--TRNQLIPRPMKLLSSEELKSESSTSVKELIMVAGGNQSILI--WM 385
Query: 370 TEES 373
+E+
Sbjct: 386 EKEN 389
Score = 300 (110.7 bits), Expect = 2.0e-25, P = 2.0e-25
Identities = 94/333 (28%), Positives = 159/333 (47%)
Query: 11 GSG-EDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKT-----KTENI 64
G+G E QL G++ R+ C+ K + K+ S+ G + L + DGK E+
Sbjct: 81 GAGVEVHQLPAGSDGARKPKCI-KLGKKMKIHSMDQGEEHMLVLSSDGKPFEYKYSIEHA 139
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
Q L I+Q G +H LA+ G +AWG N GQ G GRI
Sbjct: 140 RFQC-ILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLG--------VGRIFASTS 190
Query: 125 V--IPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQG 178
I + + +V Q++AG HS+ L+ G+V++WG+ G P ++
Sbjct: 191 TPEIVENLSGVPLV-QISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEA 249
Query: 179 LE--QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVD 236
L+ +V+ +A G H L + G ++ +G+ +YGQLG TQ +P V GL G +
Sbjct: 250 LDDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQ 309
Query: 237 IAAGGWHSTA-LTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGG 295
IA G H+ A ++D G+V+ +G G+ G+LG G ++++P+ + LL+ E++ S
Sbjct: 310 IACGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGT--RNQLIPRPMKLLSSEELKSESSTS 367
Query: 296 THSVALTRDGH--IFSFGRGDHGRLGYGRKVTT 326
+ + G+ I + ++ + RK+ T
Sbjct: 368 VKELIMVAGGNQSILIWMEKENSYVNLRRKIPT 400
Score = 193 (73.0 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 44/134 (32%), Positives = 73/134 (54%)
Query: 234 LVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSC 293
++ I G +HS AL+ GE++ WG+ G+LG G +S P+ V L+G +VQ+S
Sbjct: 150 IIQITCGDYHSLALSKGGELFAWGQNLDGQLGVG-RIFASTSTPEIVENLSGVPLVQISA 208
Query: 294 GGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAK 353
G HS+AL+ G+++S+GR D G+LG G P + + +D + + +
Sbjct: 209 GEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCI-----------EALDDQKV-E 256
Query: 354 LVACGGRHTLAIVE 367
+ACGG HT + +
Sbjct: 257 FLACGGCHTALLTK 270
Score = 103 (41.3 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 49/215 (22%), Positives = 85/215 (39%)
Query: 42 SVVAGSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGN 101
+V + RN G T + PS + AL + K+ A GG H + G + +G
Sbjct: 221 NVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALLTKSGLVFTFGDG 280
Query: 102 EYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTRE-GHVWTWG- 159
+YGQ G + + R++ ++ R V Q+A G H++ + G V+++G
Sbjct: 281 KYGQLGHNSTQNELRPRLVTG--LVGNR------VTQIACGRQHTLAYVSDTGKVFSFGS 332
Query: 160 ----QPWPPGDIKQ-ISVPVRVQGLEQVKLIAVGAFHNLALQEDG----ALWAWGNNEYG 210
Q G Q I P+++ E++K + + L + G +W N Y
Sbjct: 333 GKEGQLGNGGTRNQLIPRPMKLLSSEELKSESSTSVKELIMVAGGNQSILIWMEKENSYV 392
Query: 211 QLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHST 245
L R P +G + D+ W +T
Sbjct: 393 NLR------RKIPTLNEGTVKRWIADVGTKRWQNT 421
Score = 63 (27.2 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 7 IIAWGSGEDGQLGIGNN-EEREWVCVVKALEPYKVRSVVAGSRNSLAICDDG 57
+ AWG DGQLG+G +V+ L + + AG +S+A+ G
Sbjct: 169 LFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGEAHSMALSMSG 220
>UNIPROTKB|Q92834 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9606 "Homo sapiens" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0035085
"cilium axoneme" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007601 "visual perception" evidence=IMP] [GO:0001750
"photoreceptor outer segment" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0036064 "cilium basal body" evidence=ISS] [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0006886 "intracellular protein
transport" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0006886 GO:GO:0007601
Orphanet:1872 Orphanet:791 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 GO:GO:0042384
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:CH471141 GO:GO:0042073 GO:GO:0001750 eggNOG:COG5184
Orphanet:244 GO:GO:0036064 Orphanet:49382 GO:GO:0036126
EMBL:AL606748 CTD:6103 HOVERGEN:HBG026899 EMBL:U57629 EMBL:X97668
EMBL:AJ238395 EMBL:AJ318463 EMBL:BC031624 EMBL:AF286471
EMBL:BK005711 IPI:IPI00023757 IPI:IPI00215806 IPI:IPI00215807
IPI:IPI00215808 IPI:IPI00382445 IPI:IPI00397031 RefSeq:NP_000319.1
RefSeq:NP_001030025.1 UniGene:Hs.61438 ProteinModelPortal:Q92834
SMR:Q92834 STRING:Q92834 PhosphoSite:Q92834 DMDM:23503098
PaxDb:Q92834 PRIDE:Q92834 DNASU:6103 Ensembl:ENST00000309513
Ensembl:ENST00000318842 Ensembl:ENST00000338898
Ensembl:ENST00000339363 Ensembl:ENST00000342811
Ensembl:ENST00000378505 Ensembl:ENST00000474584
Ensembl:ENST00000482855 GeneID:6103 KEGG:hsa:6103 UCSC:uc004deb.3
GeneCards:GC0XM038128 HGNC:HGNC:10295 HPA:HPA001593 MIM:300029
MIM:300455 MIM:300834 MIM:304020 MIM:312610 neXtProt:NX_Q92834
Orphanet:247522 PharmGKB:PA34656 OMA:NNVLPHY PhylomeDB:Q92834
ChiTaRS:RPGR GenomeRNAi:6103 NextBio:23741 ArrayExpress:Q92834
Bgee:Q92834 CleanEx:HS_RPGR Genevestigator:Q92834
GermOnline:ENSG00000156313 Uniprot:Q92834
Length = 1020
Score = 303 (111.7 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 96/305 (31%), Positives = 152/305 (49%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P+ V AL K+ AA G H L + G YA GGN GQ G + +T ++
Sbjct: 78 PTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVI--SF 135
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI--KQIS---VPVRVQGL 179
+ K ++Q++AG S LT +G ++ WG G I K +S VP +V
Sbjct: 136 FTSEH---K--IKQLSAGSNTSAALTEDGRLFMWGDN-SEGQIGLKNVSNVCVPQQVTIG 189
Query: 180 EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLT--LVDI 237
+ V I+ G +H+ + DG L+ +G E G+LG + + P Q +S + ++ +
Sbjct: 190 KPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTP-QLVSEIPEKVIQV 248
Query: 238 AAGGWHSTALTDDGEVYGWGRGEHGRLGFGDN-DKSSKMVPQKVNLLAGEDIVQVSCGGT 296
A GG H+ LT++ VY +G G+ G+LG G ++S+ P+ + + + I +SCG
Sbjct: 249 ACGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSE--PKVIENIRDQTISYISCGEN 305
Query: 297 HSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVA 356
H+ +T G +++FG G HG+LG G + T N P + + R+I KLVA
Sbjct: 306 HTALITDIGLMYTFGDGRHGKLGLGLENFT--------NHFIPTLCSNFL--RFIVKLVA 355
Query: 357 CGGRH 361
CGG H
Sbjct: 356 CGGCH 360
Score = 282 (104.3 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 93/328 (28%), Positives = 153/328 (46%)
Query: 49 NSLAICDDGKTK-TENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 107
+S A+ GK+K EN P + N V + G H V + Y +G N +GQ G
Sbjct: 10 DSGAVFTFGKSKFAENNPGKF-WFKNDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLG 68
Query: 108 EEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWP 163
+ ++ + P++ V+ A G H++V T G+V+ G
Sbjct: 69 LGSKSAISKPTCVKA--LKPEK------VKLAACGRNHTLVSTEGGNVYATGGNNEGQLG 120
Query: 164 PGDIKQ---ISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPR 220
GD ++ V ++K ++ G+ + AL EDG L+ WG+N GQ+G +
Sbjct: 121 LGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVS-- 178
Query: 221 SQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV 280
+ +P Q G + I+ G +HS +T DGE+Y +G E+G+LG + + PQ V
Sbjct: 179 NVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLV 238
Query: 281 NLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKV-TTGQPMEVPINIPAP 339
+ + E ++QV+CGG H+V LT + +++FG G G+LG G + T +P + NI
Sbjct: 239 SEIP-EKVIQVACGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVIE-NI--- 292
Query: 340 RNAGDGVDRRWIAKLVACGGRHTLAIVE 367
R ++CG HT I +
Sbjct: 293 --------RDQTISYISCGENHTALITD 312
Score = 255 (94.8 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 85/324 (26%), Positives = 145/324 (44%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK-- 58
+ + +GS GQLG+G+ VKAL+P KV+ G ++L + G
Sbjct: 50 VTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVY 109
Query: 59 --------------TKTENIPSQVNAL-SNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 103
T+ N ++ S KI Q + G A+ + GR + WG N
Sbjct: 110 ATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSE 169
Query: 104 GQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP-- 161
GQ G K+ + ++ +PQ+ V ++ G HS +T +G ++ +G+P
Sbjct: 170 GQIG----LKNVS------NVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPEN 219
Query: 162 ----WPPGDIKQISVPVRVQGL-EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGD 216
P + P V + E+V +A G H + L E+ A++ +G ++GQLG G
Sbjct: 220 GKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTEN-AVYTFGLGQFGQLGLGT 278
Query: 217 TQ-PRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKM 275
S+P ++ + T+ I+ G H+ +TD G +Y +G G HG+LG G + ++
Sbjct: 279 FLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHF 338
Query: 276 VPQKVNLLAGEDIVQVSCGGTHSV 299
+P + + V+CGG H V
Sbjct: 339 IPTLCSNFLRFIVKLVACGGCHMV 362
Score = 131 (51.2 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 32/127 (25%), Positives = 62/127 (48%)
Query: 195 LQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVY 254
+ + GA++ +G +++ + G ++ +PV ++ G HS +T + ++Y
Sbjct: 8 MPDSGAVFTFGKSKFAENNPGKFWFKND-VPVH---------LSCGDEHSAVVTGNNKLY 57
Query: 255 GWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGD 314
+G G+LG G SK P V L E + +CG H++ T G++++ G +
Sbjct: 58 MFGSNNWGQLGLGSKSAISK--PTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNN 115
Query: 315 HGRLGYG 321
G+LG G
Sbjct: 116 EGQLGLG 122
>TAIR|locus:505006603 [details] [associations]
symbol:AT5G12350 "AT5G12350" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009630 "gravitropism" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0010638 "positive regulation of
organelle organization" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0042546 "cell wall
biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045492 "xylan biosynthetic
process" evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 SMART:SM00064
SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886
GO:GO:0005938 EMBL:CP002688 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 IPI:IPI00540281 RefSeq:NP_568268.3 UniGene:At.22310
UniGene:At.51056 ProteinModelPortal:F4K0X5 SMR:F4K0X5
EnsemblPlants:AT5G12350.1 GeneID:831110 KEGG:ath:AT5G12350
OMA:NTNGHPR Uniprot:F4K0X5
Length = 1075
Score = 302 (111.4 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 96/324 (29%), Positives = 151/324 (46%)
Query: 70 ALSNTKIVQA---AIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVI 126
AL +T ++ A GG H + V QG +++WG G+ G + +++ D +
Sbjct: 301 ALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLI--DALN 358
Query: 127 PQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP--WPPGDIKQIS--VPVRVQGLEQ- 181
+ VA G HS +T G ++TWG+ G ++S VP RV L +
Sbjct: 359 TTN------IELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEG 412
Query: 182 --VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAA 239
V IA G +H + G L+ +G+ +G LG GD + P V L GL V A
Sbjct: 413 IHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAAC 472
Query: 240 GGWHSTALTD------------DGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGED 287
G WH+ A+ + G+++ WG G+ GRLG G+ K K+VP V L +
Sbjct: 473 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGN--KEPKLVPTCVAALVEPN 530
Query: 288 IVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVD 347
QV+CG + +VALT GH+++ G +G+LG G+ P N +G
Sbjct: 531 FCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSH--ADGK---------TP-NRVEGKL 578
Query: 348 RRWIAKLVACGGRHTLAIVEWQTE 371
+ + +ACG H +A++ +TE
Sbjct: 579 HKSFVEEIACGAYH-VAVLTSRTE 601
Score = 270 (100.1 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 78/276 (28%), Positives = 127/276 (46%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P ++AL+ T I A G +H AV G Y WG ++G G E + R +
Sbjct: 351 PKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPK--RVNF 408
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPW----PPGDIKQISVPVRVQGLE 180
++ + V +A G H+ V+T G ++T+G GD K + +P V L+
Sbjct: 409 LLEG-----IHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLK 463
Query: 181 QVKLI--AVGAFHNLALQE------------DGALWAWGNNEYGQLGTGDTQPRSQPIPV 226
++ + A G +H A+ E G L+ WG+ + G+LG G+ +P+ P V
Sbjct: 464 GLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCV 523
Query: 227 QGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGE 286
L +A G + ALT G VY G +G+LG N + P +V +
Sbjct: 524 AALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLG---NSHADGKTPNRVEGKLHK 580
Query: 287 DIVQ-VSCGGTHSVALTRDGHIFSFGRGDHGRLGYG 321
V+ ++CG H LT ++++G+G +GRLG+G
Sbjct: 581 SFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHG 616
Score = 256 (95.2 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 70/206 (33%), Positives = 109/206 (52%)
Query: 166 DIKQISV-PVRVQG--LEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ 222
DIK S+ P ++ + V+ IA G H + + + G ++WG G+LG G Q
Sbjct: 291 DIKMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQ 350
Query: 223 PIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVN- 281
P + L+ + +A G +HS A+T G++Y WG+G+ G LG G+ + S VP++VN
Sbjct: 351 PKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGN--EVSHWVPKRVNF 408
Query: 282 LLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRN 341
LL G + ++CG H+ +T G +F+FG G G LG+G K + P EV +
Sbjct: 409 LLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREV--------D 460
Query: 342 AGDGVDRRWIAKLVACGGRHTLAIVE 367
+ G+ R + ACG HT A+VE
Sbjct: 461 SLKGL--RTVR--AACGVWHTAAVVE 482
Score = 211 (79.3 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 73/271 (26%), Positives = 118/271 (43%)
Query: 48 RNSLAICDDGKTKTENIPSQVN-ALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQC 106
+ + G + +P +VN L + A G +H V G+ + +G +G
Sbjct: 386 KGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVL 445
Query: 107 GEEPE------RKDDTGRILRRDIVIPQRCAP--KLIVRQVAAGGTHSVVLTREGHVWTW 158
G + R+ D+ + LR + C V +V G + S + G ++TW
Sbjct: 446 GHGDKKSVFIPREVDSLKGLR---TVRAACGVWHTAAVVEVMVGSSSSSNCS-SGKLFTW 501
Query: 159 GQP----WPPGDIKQISVPVRVQGLEQVKLIAVGAFHNL--ALQEDGALWAWGNNEYGQL 212
G G+ + VP V L + V H+L AL G ++ G+ YGQL
Sbjct: 502 GDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQL 561
Query: 213 GTGDTQPRSQPIPVQGLSGLTLVD-IAAGGWHSTALTDDGEVYGWGRGEHGRLGFGD-ND 270
G ++ P V+G + V+ IA G +H LT EVY WG+G +GRLG GD +D
Sbjct: 562 GNSHADGKT-PNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDD 620
Query: 271 KSSKMVPQKVNLLAGEDIVQVSCGGTHSVAL 301
++S P V L + + ++CG + A+
Sbjct: 621 RNS---PTLVESLKDKQVKSIACGTNFTAAV 648
Score = 135 (52.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 41/123 (33%), Positives = 62/123 (50%)
Query: 251 GEVYGWGRG-EHGRLGFGDN------D-KSSKMVPQKVNLLAGEDIVQVSCGGTHSVALT 302
G+V+ WG G G LG G+ D K ++P+ + D+ ++CGG H+V +T
Sbjct: 265 GDVFIWGEGIGEGVLGGGNRRVGSSFDIKMDSLLPKALESTIVLDVQNIACGGQHAVLVT 324
Query: 303 RDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHT 362
+ G FS+G GRLG+G V NI P+ D ++ I +LVACG H+
Sbjct: 325 KQGESFSWGEESEGRLGHG----------VDSNIQQPKLI-DALNTTNI-ELVACGEFHS 372
Query: 363 LAI 365
A+
Sbjct: 373 CAV 375
Score = 57 (25.1 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 9 AWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKT 61
+WG +G+LG G + + ++ AL + V G +S A+ G T
Sbjct: 331 SWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYT 383
>UNIPROTKB|Q9UGK8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0050709 "negative
regulation of protein secretion" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IDA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0007165 GO:GO:0005730
GO:GO:0045111 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050709 eggNOG:COG5184 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243950 EMBL:AJ243951
EMBL:BC065375 IPI:IPI00015919 IPI:IPI00383576 RefSeq:NP_036271.1
UniGene:Hs.32470 ProteinModelPortal:Q9UGK8 SMR:Q9UGK8 IntAct:Q9UGK8
STRING:Q9UGK8 PhosphoSite:Q9UGK8 DMDM:38257790 PaxDb:Q9UGK8
PeptideAtlas:Q9UGK8 PRIDE:Q9UGK8 Ensembl:ENST00000265965
Ensembl:ENST00000528200 GeneID:26297 KEGG:hsa:26297 UCSC:uc001mnm.3
UCSC:uc001mnn.3 GeneCards:GC11M017767 HGNC:HGNC:17499 HPA:HPA037811
MIM:606051 neXtProt:NX_Q9UGK8 PharmGKB:PA143485610
InParanoid:Q9UGK8 PhylomeDB:Q9UGK8 GenomeRNAi:26297 NextBio:48643
ArrayExpress:Q9UGK8 Bgee:Q9UGK8 CleanEx:HS_SERGEF
Genevestigator:Q9UGK8 GermOnline:ENSG00000129158 Uniprot:Q9UGK8
Length = 458
Score = 292 (107.8 bits), Expect = 1.6e-25, P = 1.6e-25
Identities = 105/348 (30%), Positives = 155/348 (44%)
Query: 42 SVVAGSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIGGW-HCLAVDDQGRAYAWGG 100
++ A NS G + +P Q+N + V+ GG H V D G + G
Sbjct: 16 ALFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGL 75
Query: 101 NEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWT--- 157
N+ GQ G G P + ++QVA G +++LT G V +
Sbjct: 76 NKDGQLG--------LGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGS 127
Query: 158 --WGQPWPPGDIKQISVPVRVQ-GLEQVKLIAVGAFHNLALQEDGALWAWGNN--EYGQ- 211
+GQ P ++ VP ++ E+V IA G H +A G ++ WG G+
Sbjct: 128 NSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGRR 187
Query: 212 LGTGDTQP----RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFG 267
L G T P +P V GL + + AG HS +LTD GEVY WG +HG+L
Sbjct: 188 LCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLA-- 245
Query: 268 DNDKSSKMVPQKV--NLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVT 325
N+ + VPQK+ + E + + G TH VA T G +F++GR D+G+LG RK+
Sbjct: 246 -NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG--RKLE 302
Query: 326 T--GQPME-----VPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIV 366
T G +E +P + P P + A V+CG H LAI+
Sbjct: 303 TYEGWKLEKQDSFLPCSRP-PNSMPSSPHCLTGATEVSCGSEHNLAII 349
Score = 188 (71.2 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 60/214 (28%), Positives = 96/214 (44%)
Query: 173 PVRVQGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDT-QPRSQPIPVQGL 229
P RV GLE K + V G+ H+ +L + G ++ WG+N++GQL P Q I
Sbjct: 203 PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCF 262
Query: 230 SGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLG----------------FGDNDKSS 273
+ I +G H A T+ G+++ WGR ++G+LG F +
Sbjct: 263 QNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPP 322
Query: 274 KMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVP 333
+P + L G +VSCG H++A+ G +S+G +HG G G + P V
Sbjct: 323 NSMPSSPHCLTGA--TEVSCGSEHNLAII-GGVCYSWGWNEHGMCGDGTEANVWAPKPVQ 379
Query: 334 INIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
+ + G+ LV CG H+LA+ +
Sbjct: 380 ALL-----SSSGL-------LVGCGAGHSLALCQ 401
Score = 180 (68.4 bits), Expect = 9.5e-15, Sum P(2) = 9.5e-15
Identities = 54/187 (28%), Positives = 87/187 (46%)
Query: 182 VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGG 241
V+ I G H+ + + G L+ G N+ GQLG G T+ P + L G + +A G
Sbjct: 51 VRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCKSLFGCPIQQVACG- 109
Query: 242 WHSTA-LTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVA 300
W T LT++G+V G G+LG + +VPQ + L E +V ++ G H+VA
Sbjct: 110 WDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRC-VVPQAIELHK-EKVVCIAAGLRHAVA 167
Query: 301 LTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGR 360
T G +F +G G GR++ GQ + + P G++ A V G
Sbjct: 168 ATASGIVFQWGTG---LASCGRRLCPGQTLPLFFTAKEPSRV-TGLENSK-AMCVLAGSD 222
Query: 361 HTLAIVE 367
H+ ++ +
Sbjct: 223 HSASLTD 229
Score = 97 (39.2 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 26/77 (33%), Positives = 37/77 (48%)
Query: 171 SVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLS 230
S+P L ++ G+ HNLA+ G ++WG NE+G G G P PVQ L
Sbjct: 324 SMPSSPHCLTGATEVSCGSEHNLAII-GGVCYSWGWNEHGMCGDGTEANVWAPKPVQALL 382
Query: 231 GLTLVDIAAGGWHSTAL 247
+ + + G HS AL
Sbjct: 383 SSSGLLVGCGAGHSLAL 399
Score = 93 (37.8 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 44/169 (26%), Positives = 66/169 (39%)
Query: 11 GSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKT--EN----- 63
G +DGQLG+G+ E+ + K+L ++ V G ++ + ++G+ + N
Sbjct: 74 GLNKDGQLGLGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQL 133
Query: 64 -IPS--------QVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKD 114
+P Q L K+V A G H +A G + WG CG R+
Sbjct: 134 GVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTG-LASCG----RRL 188
Query: 115 DTGRILRRDIVI--PQRCA--PKLIVRQVAAGGTHSVVLTREGHVWTWG 159
G+ L P R V AG HS LT G V+ WG
Sbjct: 189 CPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWG 237
Score = 76 (31.8 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 3 STTSIIAWGSGEDGQLGIGNNEEREWVCVVKAL----EPYKVRSVVAGSRNSLAICDDG 57
+ ++ AWG+ GQLG+G+ E+ V + + L +P VR + G +S + D G
Sbjct: 13 AAAALFAWGANSYGQLGLGHKED---VLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGG 68
Score = 63 (27.2 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVV-KALEPYK--VRSVVAGSRNSLAICDDG 57
+++ GS GQLG+ + R CVV +A+E +K V + AG R+++A G
Sbjct: 122 VLSCGSNSFGQLGVPHGPRR---CVVPQAIELHKEKVVCIAAGLRHAVAATASG 172
>UNIPROTKB|F1PB99 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT EMBL:AAEX03016753
EMBL:AAEX03016752 Ensembl:ENSCAFT00000015560 Uniprot:F1PB99
Length = 1025
Score = 301 (111.0 bits), Expect = 1.7e-25, P = 1.7e-25
Identities = 75/217 (34%), Positives = 117/217 (53%)
Query: 133 KLIVRQVAAGGTHSVVLTRE--GHVWTWGQ----PWPPGDI-KQISVPVRVQGLEQVKLI 185
K I+ Q+ G HS+ L++ G ++ WGQ G + I P V+ L V L+
Sbjct: 135 KSII-QITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLV 193
Query: 186 AV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWH 243
+ G H++AL G +++WG N+ GQLG G T P ++ L + +A GG H
Sbjct: 194 QISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSH 253
Query: 244 STALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGT-HSVALT 302
+ LT DG V+ +G G++G+LG N +++ P+ V LAG + QV+CG H++A
Sbjct: 254 TALLTKDGLVFTFGAGKYGQLGH--NSTQNELRPRLVTELAGNRVTQVACGSRWHTLAYV 311
Query: 303 RD-GHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPA 338
D G +FSFG G G+LG G T Q + +P+ +P+
Sbjct: 312 SDLGKVFSFGSGKEGQLGNGG--THNQLIPLPMKLPS 346
Score = 273 (101.2 bits), Expect = 5.1e-22, P = 5.1e-22
Identities = 80/278 (28%), Positives = 137/278 (49%)
Query: 32 VKALEPYKVRSVVAGSRNSLAICDDGKTKTENIP----SQVNALSNTK-IVQAAIGGWHC 86
+K + K+ SV G+ + L + DGK N S+ + K I+Q G +H
Sbjct: 88 IKLGKKMKIHSVDQGAEHMLILSSDGKPFEYNYSIEHASRFQCILQEKSIIQITCGDYHS 147
Query: 87 LAVD--DQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCA--PKLIVRQVAAG 142
LA+ G +AWG N +GQ G GR+ I PQ + + Q++AG
Sbjct: 148 LALSKGQGGELFAWGQNLHGQLG--------VGRLFT-SIPTPQLVEHLSGVPLVQISAG 198
Query: 143 GTHSVVLTREGHVWTWGQPWPPGDIKQISV--------PVRVQGLE--QVKLIAVGAFHN 192
HS+ L+ G++++WG+ D+ Q+ + P ++ L+ +V+ +A G H
Sbjct: 199 KAHSMALSMSGNIYSWGR----NDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHT 254
Query: 193 LALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGG-WHSTALTDD- 250
L +DG ++ +G +YGQLG TQ +P V L+G + +A G WH+ A D
Sbjct: 255 ALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGSRWHTLAYVSDL 314
Query: 251 GEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDI 288
G+V+ +G G+ G+LG G ++++P + L + E++
Sbjct: 315 GKVFSFGSGKEGQLGNGGTH--NQLIPLPMKLPSNEEL 350
Score = 205 (77.2 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 51/137 (37%), Positives = 79/137 (57%)
Query: 233 TLVDIAAGGWHSTALT--DDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQ 290
+++ I G +HS AL+ GE++ WG+ HG+LG G +S PQ V L+G +VQ
Sbjct: 136 SIIQITCGDYHSLALSKGQGGELFAWGQNLHGQLGVG-RLFTSIPTPQLVEHLSGVPLVQ 194
Query: 291 VSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRW 350
+S G HS+AL+ G+I+S+GR D G+LG G T G+ + P I A +D +
Sbjct: 195 ISAGKAHSMALSMSGNIYSWGRNDLGQLGLGH--TNGE--DFPSLIEA-------LDNQK 243
Query: 351 IAKLVACGGRHTLAIVE 367
+ + +ACGG HT + +
Sbjct: 244 V-EFLACGGSHTALLTK 259
Score = 115 (45.5 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 53/216 (24%), Positives = 87/216 (40%)
Query: 42 SVVAGSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGN 101
++ + RN L G T E+ PS + AL N K+ A GG H + G + +G
Sbjct: 210 NIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTALLTKDGLVFTFGAG 269
Query: 102 EYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGT-HSVVLTRE-GHVWTWG 159
+YGQ G + + R++ + R V QVA G H++ + G V+++G
Sbjct: 270 KYGQLGHNSTQNELRPRLVTE--LAGNR------VTQVACGSRWHTLAYVSDLGKVFSFG 321
Query: 160 -----QPWPPGDIKQ-ISVPVRVQGLEQVKLIAVGAFHNLALQEDG----ALWAWGNNEY 209
Q G Q I +P+++ E++K + + L + G LW N Y
Sbjct: 322 SGKEGQLGNGGTHNQLIPLPMKLPSNEELKFESRTSEKELIMIAGGNQSILLWMGKKNPY 381
Query: 210 GQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHST 245
L R P +G + D+ W +T
Sbjct: 382 VNLR------RRIPTLNEGTVKRWIADVGTKQWQNT 411
Score = 52 (23.4 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 7 IIAWGSGEDGQLGIGNN-EEREWVCVVKALEPYKVRSVVAGSRNSLAICDDG 57
+ AWG GQLG+G +V+ L + + AG +S+A+ G
Sbjct: 158 LFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQISAGKAHSMALSMSG 209
>DICTYBASE|DDB_G0278255 [details] [associations]
symbol:DDB_G0278255 "regulator of chromosome
condensation (RCC1) domain-containing protein" species:44689
"Dictyostelium discoideum" [GO:0044351 "macropinocytosis"
evidence=RCA] dictyBase:DDB_G0278255 INTERPRO:IPR000408
Pfam:PF00415 EMBL:AAFI02000023 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_642243.1
ProteinModelPortal:Q54YF9 PRIDE:Q54YF9 EnsemblProtists:DDB0235387
GeneID:8621452 KEGG:ddi:DDB_G0278255 InParanoid:Q54YF9 OMA:DIACGGY
Uniprot:Q54YF9
Length = 514
Score = 254 (94.5 bits), Expect = 3.4e-25, Sum P(2) = 3.4e-25
Identities = 63/190 (33%), Positives = 98/190 (51%)
Query: 161 PWPPGDIKQISVPVRVQG-----LEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTG 215
P P + + S P++V + K I G+ HNL L DG+L++WGN +G LG G
Sbjct: 221 PSSPSEDEYYSKPIKVLKETDPIFKDFKKICSGSDHNLLLGNDGSLYSWGNGYFGALGHG 280
Query: 216 -DTQPRSQPIPVQGLSGLTL-------VDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFG 267
+ + + ++ TL VDIA GG+HS LT+D E+Y +G GE G+LG G
Sbjct: 281 VGSNDKENIYTPKKITTFTLNNNESRIVDIACGGYHSMFLTNDNEIYTFGYGEFGQLGHG 340
Query: 268 DNDKSSKMVPQKVNLL----AGEDIVQVSCGG-THSVALTRDGHIFSFGRGDHGRLGYGR 322
+ND + +P+++ AG I + G +S +T DG ++S+G D G LG+G
Sbjct: 341 ENDTLNHYIPKRIKSTGDNAAGNKIKSIFAGDHANSFYITTDGSVYSWGWNDGGSLGHGT 400
Query: 323 KVTTGQPMEV 332
P ++
Sbjct: 401 NENHYSPKKI 410
Score = 189 (71.6 bits), Expect = 7.3e-17, Sum P(2) = 7.3e-17
Identities = 42/116 (36%), Positives = 60/116 (51%)
Query: 237 IAAGGWHSTALTDDGEVYGWGRGEHGRLGFG--DNDKSSKMVPQKVNLLA---GED-IVQ 290
I +G H+ L +DG +Y WG G G LG G NDK + P+K+ E IV
Sbjct: 250 ICSGSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLNNNESRIVD 309
Query: 291 VSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGV 346
++CGG HS+ LT D I++FG G+ G+LG+G T + I AG+ +
Sbjct: 310 IACGGYHSMFLTNDNEIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTGDNAAGNKI 365
Score = 171 (65.3 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 59/254 (23%), Positives = 113/254 (44%)
Query: 134 LIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEQVKLIAVGA-FHN 192
L + + A HS ++ + WG + ++ +++ +++ +++G F
Sbjct: 72 LKAKDIFANAYHSGIINENDEFYHWGLY--SNLVTEVPNKIKINNDKKISNVSLGGNFII 129
Query: 193 LALQEDGALWAWGNNEYGQLGTG-------DTQPRSQPI-PVQGLSGLTLVDIAAGGWHS 244
L ++D L++ G ++YG LG G D ++ + ++ + ++ I +G HS
Sbjct: 130 LQTKDDNQLYSIGKSKYGVLGIGRSIDDDDDNNNNNEKVYKIEKFND-NIISIVSGYEHS 188
Query: 245 TALTDDGEVYGWGRGEHGRLGFGDN--DKSSK-MVPQK-------VNLLAGEDIV----- 289
+T D +YGWGR +LG + DKSS P + + +L D +
Sbjct: 189 LVVTKDDGIYGWGRNHKNQLGGRERVKDKSSSPSSPSEDEYYSKPIKVLKETDPIFKDFK 248
Query: 290 QVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRR 349
++ G H++ L DG ++S+G G G LG+G + + P I + R
Sbjct: 249 KICSGSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKITT-FTLNNNESR- 306
Query: 350 WIAKLVACGGRHTL 363
I +ACGG H++
Sbjct: 307 -IVD-IACGGYHSM 318
Score = 153 (58.9 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 49/205 (23%), Positives = 88/205 (42%)
Query: 82 GGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAA 141
G H L + + G Y+WG +G G D + I + + +A
Sbjct: 253 GSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLNNNESRIVDIAC 312
Query: 142 GGTHSVVLTREGHVWTWGQ----PWPPGDIKQIS--VPVRVQGL------EQVKLIAVGA 189
GG HS+ LT + ++T+G G+ ++ +P R++ ++K I G
Sbjct: 313 GGYHSMFLTNDNEIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTGDNAAGNKIKSIFAGD 372
Query: 190 FHN-LALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALT 248
N + DG++++WG N+ G LG G + P +Q LS + I +G H+ A +
Sbjct: 373 HANSFYITTDGSVYSWGWNDGGSLGHGTNENHYSPKKIQSLSNIK--KITSGFKHTLAQS 430
Query: 249 DDGEVYGWGRGEHGRLGFGDNDKSS 273
+ ++Y +G G+ N S+
Sbjct: 431 INNDIYVFGDNTFGQTALKFNYNSN 455
Score = 144 (55.7 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 45/168 (26%), Positives = 76/168 (45%)
Query: 57 GKTKTENI--PSQVNA--LSN--TKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEP 110
G ENI P ++ L+N ++IV A GG+H + + + Y +G E+GQ G
Sbjct: 282 GSNDKENIYTPKKITTFTLNNNESRIVDIACGGYHSMFLTNDNEIYTFGYGEFGQLGHG- 340
Query: 111 ERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGG-THSVVLTREGHVWTWGQPWPPGDI-- 167
D + + I A ++ + AG +S +T +G V++WG W G
Sbjct: 341 -ENDTLNHYIPKRIKSTGDNAAGNKIKSIFAGDHANSFYITTDGSVYSWG--WNDGGSLG 397
Query: 168 ----KQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQ 211
+ P ++Q L +K I G H LA + ++ +G+N +GQ
Sbjct: 398 HGTNENHYSPKKIQSLSNIKKITSGFKHTLAQSINNDIYVFGDNTFGQ 445
Score = 88 (36.0 bits), Expect = 3.4e-25, Sum P(2) = 3.4e-25
Identities = 25/102 (24%), Positives = 51/102 (50%)
Query: 61 TENIPSQVNALSNTKIVQAAIGG-WHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRI 119
TE +P+++ ++ KI ++GG + L D + Y+ G ++YG G DD
Sbjct: 104 TE-VPNKIKINNDKKISNVSLGGNFIILQTKDDNQLYSIGKSKYGVLGIGRSIDDDDDNN 162
Query: 120 LRRDIVIP-QRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ 160
+ V ++ +I + +G HS+V+T++ ++ WG+
Sbjct: 163 NNNEKVYKIEKFNDNII--SIVSGYEHSLVVTKDDGIYGWGR 202
Score = 84 (34.6 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 28/125 (22%), Positives = 48/125 (38%)
Query: 44 VAGSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 103
V G S+ DD E + ++ N I+ G H L V Y WG N
Sbjct: 148 VLGIGRSIDDDDDNNNNNEKV-YKIEKF-NDNIISIVSGYEHSLVVTKDDGIYGWGRNHK 205
Query: 104 GQCGEEPERKDDTG--------RILRRDIVIPQRCAPKLI-VRQVAAGGTHSVVLTREGH 154
Q G KD + + I + + P +++ +G H+++L +G
Sbjct: 206 NQLGGRERVKDKSSSPSSPSEDEYYSKPIKVLKETDPIFKDFKKICSGSDHNLLLGNDGS 265
Query: 155 VWTWG 159
+++WG
Sbjct: 266 LYSWG 270
>ZFIN|ZDB-GENE-070615-14 [details] [associations]
symbol:zgc:163136 "zgc:163136" species:7955 "Danio
rerio" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006464
"cellular protein modification process" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-070615-14 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00852092
Ensembl:ENSDART00000113072 OMA:CELECKL Bgee:F1Q5I9 Uniprot:F1Q5I9
Length = 997
Score = 296 (109.3 bits), Expect = 5.7e-25, P = 5.7e-25
Identities = 73/193 (37%), Positives = 101/193 (52%)
Query: 176 VQGLE--QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ-PIPVQGLSGL 232
++GLE QV IA G H++AL DG L+ WG N GQLG Q +Q P +Q L G+
Sbjct: 110 LKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPQHLQSLCGI 169
Query: 233 TLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVS 292
+ I+AGG HS L+ G V+GWG G+LG GD + + +P V L+G+ V +S
Sbjct: 170 PVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDT--TDRFIPTIVKSLSGKKTVSIS 227
Query: 293 CGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIA 352
CGG H+ L++ G +F+FG G G+LG+ P V W +
Sbjct: 228 CGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVA--------------ELWGS 273
Query: 353 KL--VACGGRHTL 363
K+ V CG HTL
Sbjct: 274 KVSQVTCGRHHTL 286
Score = 293 (108.2 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 81/245 (33%), Positives = 121/245 (49%)
Query: 106 CGEEPE-RKDDTGRILRRD---IVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP 161
CGE D G++L D + P + V Q+A G HS+ LT +G ++ WG+
Sbjct: 84 CGEAGAVLLADDGKVLVMDQSTVCRPLKGLENRQVIQIACGDQHSMALTNDGQLFVWGEN 143
Query: 162 WPPGDI----KQISV--PVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLG 213
G + +Q P +Q L + + I+ G H+ L G ++ WG+N GQLG
Sbjct: 144 -ALGQLGLRKEQAGTQSPQHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLG 202
Query: 214 TGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSS 273
GDT R P V+ LSG V I+ GG H+ L+ G V+ +G G G+LG N
Sbjct: 203 LGDTTDRFIPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGH--NSLKD 260
Query: 274 KMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGH-IFSFGRGDHGRLGYGRKVTTGQPMEV 332
+ P+ V L G + QV+CG H++ + I+SFG G G+LG G +V P+
Sbjct: 261 EHHPRLVAELWGSKVSQVTCGRHHTLVFEDSSNQIYSFGCGMQGQLGNGEQVKQSVPL-- 318
Query: 333 PINIP 337
P+ +P
Sbjct: 319 PVLLP 323
Score = 286 (105.7 bits), Expect = 6.6e-24, P = 6.6e-24
Identities = 80/291 (27%), Positives = 133/291 (45%)
Query: 22 NNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKT---ENIPSQVNALSNTKIVQ 78
+NE+ + L+ ++RS+V G ++ + DDGK + + L N +++Q
Sbjct: 61 HNEDADEKLEPLQLQNERIRSIVCGEAGAVLLADDGKVLVMDQSTVCRPLKGLENRQVIQ 120
Query: 79 AAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQ 138
A G H +A+ + G+ + WG N GQ G RK+ G + + C + V Q
Sbjct: 121 IACGDQHSMALTNDGQLFVWGENALGQLGL---RKEQAGTQSPQHL--QSLCG--IPVAQ 173
Query: 139 VAAGGTHSVVLTREGHVWTWGQPWPP----GDIKQISVPVRVQGLEQVKLIAV--GAFHN 192
++AGG HS VL+ G V+ WG GD +P V+ L K +++ G H
Sbjct: 174 ISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKKTVSISCGGEHT 233
Query: 193 LALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDG- 251
L + G ++ +G+ +GQLG + P V L G + + G H+ D
Sbjct: 234 ATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVFEDSSN 293
Query: 252 EVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQ-VSCGGTHSVAL 301
++Y +G G G+LG G+ K S +P + E ++ + G HS AL
Sbjct: 294 QIYSFGCGMQGQLGNGEQVKQSVPLPVLLPTECTEFTMEKLIAGENHSFAL 344
Score = 192 (72.6 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 46/141 (32%), Positives = 74/141 (52%)
Query: 225 PVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLA 284
P++GL ++ IA G HS ALT+DG+++ WG G+LG +++ PQ + L
Sbjct: 109 PLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLR-KEQAGTQSPQHLQSLC 167
Query: 285 GEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGD 344
G + Q+S GG HS L+ G +F +G G+LG G TT + IP +
Sbjct: 168 GIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGD--TTDR------FIPTIVKSLS 219
Query: 345 GVDRRWIAKLVACGGRHTLAI 365
G ++ ++ ++CGG HT +
Sbjct: 220 G--KKTVS--ISCGGEHTATL 236
>TAIR|locus:2205794 [details] [associations]
symbol:AT1G27060 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 EMBL:BT030023 IPI:IPI00535833 RefSeq:NP_174026.1
UniGene:At.41142 UniGene:At.50938 ProteinModelPortal:A2RVN2
SMR:A2RVN2 DNASU:839595 EnsemblPlants:AT1G27060.1 GeneID:839595
KEGG:ath:AT1G27060 TAIR:At1g27060 HOGENOM:HOG000236375
InParanoid:A2RVN2 OMA:GYIYAWG PhylomeDB:A2RVN2
ProtClustDB:CLSN2682864 Genevestigator:A2RVN2 Uniprot:A2RVN2
Length = 386
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 77/254 (30%), Positives = 126/254 (49%)
Query: 90 DDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLI--VRQVAAGGTHSV 147
+++ + ++WG GQ G T ++ +D ++PQ + + + +A GG H +
Sbjct: 12 EEEEQVWSWGAGTDGQLG--------TTKL--QDELLPQLLSLTSLPSISMLACGGAHVI 61
Query: 148 VLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGLEQ--VKLIAVGAFHNLALQEDGAL 201
LT G V+TWG+ GDI I++P V + + A G H+ + + G +
Sbjct: 62 ALTSGGKVFTWGRGSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCI 121
Query: 202 WAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEH 261
+ GN +GQLG GDT S P V + ++ +A G HS L +V G+G G+
Sbjct: 122 FTCGNGSFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKR 181
Query: 262 GRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYG 321
G+LGF + S +P V+ L ++V++S G HS A++ DG FS+GRG G G
Sbjct: 182 GQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWGRGFCG----G 237
Query: 322 RKVTTGQPMEVPIN 335
V Q + P++
Sbjct: 238 PDVHAPQSLPSPLS 251
Score = 248 (92.4 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 93/340 (27%), Positives = 150/340 (44%)
Query: 9 AWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKTE------ 62
+WG+G DGQLG ++ ++ + + G + +A+ GK T
Sbjct: 19 SWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRGSSG 78
Query: 63 --------NI--PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPER 112
NI P V+ ++ I QAA G H V D G + G +GQ G
Sbjct: 79 QLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGH---- 134
Query: 113 KDDTGRILRRDIVIPQRCAP--KLIVRQVAAGGTHSVVLTREGHVWTWGQP------WPP 164
DT + P + + V+ VA G HS+VL V +G +
Sbjct: 135 -GDT-----LSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSS 188
Query: 165 GDIKQISVPVRVQGLEQVKLIAVGAF--HNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ 222
IK +++P V GL+ V+++ + A H+ A+ DG ++WG G G P+S
Sbjct: 189 DRIKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWGRGFCG--GPDVHAPQSL 246
Query: 223 PIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDND-KSSKMVPQKVN 281
P P L+ ++A G H+ LT DGEV+ G + + SS+ + +KV
Sbjct: 247 PSP------LSFREVAVGWNHALLLTVDGEVFKLGSTLNKQPEKQQLQIDSSEALFEKVP 300
Query: 282 LLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYG 321
G ++Q++ G HS A+T +G + ++G G+HG+LG G
Sbjct: 301 DFDGVKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQLGLG 340
Score = 238 (88.8 bits), Expect = 4.3e-18, P = 4.3e-18
Identities = 86/329 (26%), Positives = 147/329 (44%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDG--- 57
+ S + WG G GQLG G+ +V + + AG +S + D G
Sbjct: 63 LTSGGKVFTWGRGSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIF 122
Query: 58 -------------KTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYG 104
T + + P++V+ +N + A G H L + + +G + G
Sbjct: 123 TCGNGSFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRG 182
Query: 105 QCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPP 164
Q G +R + + V+ +VR ++A G HS ++ +G ++WG+ +
Sbjct: 183 QLGFSSDRI----KSVNLPCVV-SGLKDVEVVR-ISANGDHSAAISADGQFFSWGRGFCG 236
Query: 165 GDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNN-----EYGQLGTGDTQP 219
G + P + + +AVG H L L DG ++ G+ E QL ++
Sbjct: 237 GP--DVHAPQSLPSPLSFREVAVGWNHALLLTVDGEVFKLGSTLNKQPEKQQLQIDSSEA 294
Query: 220 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGD-NDKSSKMVPQ 278
+ +P G+ ++ IAAG HS A+T++GEV WG GEHG+LG G+ ND++S P+
Sbjct: 295 LFEKVP--DFDGVKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQLGLGNTNDQTS---PE 349
Query: 279 KVNLLAGEDI----VQVSCGGTHSVALTR 303
V+L D+ ++V CG + A+ R
Sbjct: 350 LVSL-GSIDLRTKEIKVYCGSGFTYAVKR 377
Score = 226 (84.6 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 60/171 (35%), Positives = 89/171 (52%)
Query: 196 QEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVD-IAAGGWHSTALTDDGEVY 254
+E+ +W+WG GQLGT Q P + L+ L + +A GG H ALT G+V+
Sbjct: 12 EEEEQVWSWGAGTDGQLGTTKLQDELLP-QLLSLTSLPSISMLACGGAHVIALTSGGKVF 70
Query: 255 GWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGD 314
WGRG G+LG GD + +P+ V+ I Q + G +HS ++ G IF+ G G
Sbjct: 71 TWGRGSSGQLGHGDILNIT--LPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGS 128
Query: 315 HGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
G+LG+G ++ P +V + N D V K+VACG RH+L +
Sbjct: 129 FGQLGHGDTLSLSTPAKV-----SHFN-NDSV------KMVACGMRHSLVL 167
>ZFIN|ZDB-GENE-040426-2216 [details] [associations]
symbol:rcc1 "regulator of chromosome condensation
1" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-040426-2216
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
HSSP:P18754 OMA:GTESCFV EMBL:CR855299 EMBL:BC059796 EMBL:BC066721
IPI:IPI00511389 RefSeq:NP_998343.1 UniGene:Dr.77012 SMR:Q6NY65
STRING:Q6NY65 Ensembl:ENSDART00000054026 GeneID:406457
KEGG:dre:406457 InParanoid:Q6NY65 NextBio:20818049 Uniprot:Q6NY65
Length = 418
Score = 283 (104.7 bits), Expect = 7.7e-25, P = 7.7e-25
Identities = 109/409 (26%), Positives = 185/409 (45%)
Query: 7 IIAWGSGEDGQLGIGNNE-EREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKT---- 61
++ G G+ GQLG+G + ER+ +V P + VAG +++ + D G T
Sbjct: 37 VLVLGQGDVGQLGLGEDVMERKKPALVTL--PEGIVQAVAGGMHTVCLSDTGNVYTFGCN 94
Query: 62 --------------ENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGG--NEYGQ 105
E +P++V+ KI+Q + G H A+ + G Y WG + G
Sbjct: 95 DEGALGRDTSEEGSETVPAKVDL--GEKIIQVSAGDSHSAALTEDGGVYVWGSFRDNNGV 152
Query: 106 CGE-EPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPP 164
G EP +K + +P K +V+ + +G H V+LT G ++T G
Sbjct: 153 IGLLEPMKKCTV------PVKVP---IDKPVVK-IVSGNDHLVMLTAHGELYTSGCG-EQ 201
Query: 165 GDIKQISVPVRVQG--------LE-QVKLIA-----------VGAFHNLALQEDGALWAW 204
G + +++ +G LE Q+ +I GA+ A+ ++G ++ +
Sbjct: 202 GQLGRVAEHFANRGGRKGLMRLLEPQMVIIKPRGKVVFTDVFCGAYFTFAVSKEGHVYGF 261
Query: 205 GNNEYGQLGTGDTQPRSQPIPVQGLSGLTL--VDIAAGGWHSTALTDDGEVYGWGRGEHG 262
G + Y QLGT T P+ + T V + G H+ L +G+ Y GR E+G
Sbjct: 262 GLSNYHQLGTQSTNTCFVPVKLSSFKNSTTSWVGFSGGQHHTLCLNSEGKAYSLGRAEYG 321
Query: 263 RLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGR 322
RLG G D K P V ++ D+ V+CG + S A+T+ G +FS+G G + +LG G
Sbjct: 322 RLGLG-KDVGEKSEPTVVPGIS--DVQVVACGASVSYAVTKQGSVFSWGMGTNLQLGTGE 378
Query: 323 KVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVEWQTE 371
+ P+E+ G ++ R + V+ GG+HT+ +V+ + E
Sbjct: 379 EEDEWSPVEM---------TGKQLENRVVLS-VSSGGQHTVLLVKDKQE 417
Score = 219 (82.2 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 62/207 (29%), Positives = 101/207 (48%)
Query: 118 RILRRDIVIPQ--RCAPKLIVRQVAAGGTHSVVLTR-EGHVWTWGQPWPPGDIKQISVPV 174
+ ++R P A KL V ++ G +VL +G V GQ D+ + P
Sbjct: 5 KAVKRQTAAPSDSTVAKKLKVSHISHGQEKGLVLVLGQGDV---GQLGLGEDVMERKKPA 61
Query: 175 RVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTL 234
V E + G H + L + G ++ +G N+ G LG ++ S+ +P + G +
Sbjct: 62 LVTLPEGIVQAVAGGMHTVCLSDTGNVYTFGCNDEGALGRDTSEEGSETVPAKVDLGEKI 121
Query: 235 VDIAAGGWHSTALTDDGEVYGWG--RGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVS 292
+ ++AG HS ALT+DG VY WG R +G +G + K VP KV + + +V++
Sbjct: 122 IQVSAGDSHSAALTEDGGVYVWGSFRDNNGVIGLLEPMKKCT-VPVKVPI--DKPVVKIV 178
Query: 293 CGGTHSVALTRDGHIFSFGRGDHGRLG 319
G H V LT G +++ G G+ G+LG
Sbjct: 179 SGNDHLVMLTAHGELYTSGCGEQGQLG 205
>ZFIN|ZDB-GENE-070912-423 [details] [associations]
symbol:rpgra "retinitis pigmentosa GTPase regulator
a" species:7955 "Danio rerio" [GO:0072001 "renal system
development" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-070912-423 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0072001 GeneTree:ENSGT00700000104160 EMBL:BX571713
IPI:IPI00955233 RefSeq:XP_003199276.1 Ensembl:ENSDART00000079095
GeneID:571327 KEGG:dre:571327 CTD:571327 NextBio:20890513
Bgee:F1QV77 Uniprot:F1QV77
Length = 1698
Score = 297 (109.6 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 91/294 (30%), Positives = 143/294 (48%)
Query: 52 AICDDGKTK-TENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE- 109
A+ GK+K N+PS++ S+ V + G H V +QGR + +G N GQ G +
Sbjct: 12 AVFTFGKSKIANNVPSRLWLKSDIP-VHISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQI 70
Query: 110 --PERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI 167
P K ++L+ + R + VA G H++V T +G + G G +
Sbjct: 71 KGPVTKPVCVKVLKGE-----RA------QSVACGTDHTLVSTSQGEILAAGGN-SDGQL 118
Query: 168 K--QISVPVRVQGLEQ------VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQP 219
+ + Q L +KL++ G + AL EDG L+ WG+N GQLG G+
Sbjct: 119 GLGHCNDSISFQRLRPFCDYAPIKLLSAGDHTSAALTEDGRLFLWGDNSAGQLGFGNDSH 178
Query: 220 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 279
P + G ++ ++ G HS +TD G+VY +G GRLG + ++ PQ+
Sbjct: 179 ALLPKELN--MGQSIHWVSCGYRHSALVTDSGDVYSFGESADGRLGLSAHQLANHSYPQR 236
Query: 280 VNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKV-TTGQPMEV 332
V L ++QV+CGG H++ALT D ++ FG G+ G+LG G V P+ V
Sbjct: 237 VESL--HSVLQVACGGKHTLALTED-ELYCFGGGEFGQLGLGTLVFVADSPVAV 287
Score = 262 (97.3 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 87/323 (26%), Positives = 147/323 (45%)
Query: 7 IIAWGSGEDGQLGIG-NNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKTE--N 63
+ +G GQLG+ + VCV K L+ + +SV G+ ++L G+ N
Sbjct: 55 LFVFGDNNRGQLGLQIKGPVTKPVCV-KVLKGERAQSVACGTDHTLVSTSQGEILAAGGN 113
Query: 64 IPSQV------NALSNTKI--------VQAAIGGWHC-LAVDDQGRAYAWGGNEYGQCGE 108
Q+ +++S ++ ++ G H A+ + GR + WG N GQ G
Sbjct: 114 SDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAGDHTSAALTEDGRLFLWGDNSAGQLGF 173
Query: 109 EPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI- 167
+D+ +L +++ + Q + V+ G HS ++T G V+++G+ G +
Sbjct: 174 G----NDSHALLPKELNMGQS------IHWVSCGYRHSALVTDSGDVYSFGES-ADGRLG 222
Query: 168 ---KQI---SVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQ-PR 220
Q+ S P RV+ L V +A G H LAL ED L+ +G E+GQLG G
Sbjct: 223 LSAHQLANHSYPQRVESLHSVLQVACGGKHTLALTED-ELYCFGGGEFGQLGLGTLVFVA 281
Query: 221 SQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV 280
P+ V + + G HS +TD G +Y +G G HG+LG GD + +++ P
Sbjct: 282 DSPVAVGHFRKGRVTHVTCGEQHSALITDSGLLYTFGDGRHGKLGHGDENFTNQFTPTVC 341
Query: 281 NLLAGEDIVQVSCGGTHSVALTR 303
++ V+CG +H + R
Sbjct: 342 QRFFEYSVMTVACGSSHMLVFAR 364
Score = 257 (95.5 bits), Expect = 4.4e-19, P = 4.4e-19
Identities = 81/250 (32%), Positives = 120/250 (48%)
Query: 126 IPQRCAPKL-IVRQVAAGGTHSVVLTREGHVWTWGQP--WPPG-DIK-QISVPVRVQGL- 179
+P R K I ++ G +HS +T +G ++ +G G IK ++ PV V+ L
Sbjct: 25 VPSRLWLKSDIPVHISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLK 84
Query: 180 -EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIA 238
E+ + +A G H L G + A G N GQLG G ++ + +
Sbjct: 85 GERAQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLL 144
Query: 239 AGGWH-STALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTH 297
+ G H S ALT+DG ++ WG G+LGFG ND S ++P+++N+ G+ I VSCG H
Sbjct: 145 SAGDHTSAALTEDGRLFLWGDNSAGQLGFG-ND-SHALLPKELNM--GQSIHWVSCGYRH 200
Query: 298 SVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVAC 357
S +T G ++SFG GRLG N P+ V+ VAC
Sbjct: 201 SALVTDSGDVYSFGESADGRLGLSAHQLA--------NHSYPQR----VESLHSVLQVAC 248
Query: 358 GGRHTLAIVE 367
GG+HTLA+ E
Sbjct: 249 GGKHTLALTE 258
Score = 250 (93.1 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 77/271 (28%), Positives = 123/271 (45%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P V L + A G H L QG A GGN GQ G G D
Sbjct: 77 PVCVKVLKGERAQSVACGTDHTLVSTSQGEILAAGGNSDGQLG--------LGHC--NDS 126
Query: 125 VIPQRCAP---KLIVRQVAAGGTHSVVLTREGHVWTWGQPWPP----GDIKQISVPVRVQ 177
+ QR P ++ ++AG S LT +G ++ WG G+ +P +
Sbjct: 127 ISFQRLRPFCDYAPIKLLSAGDHTSAALTEDGRLFLWGDNSAGQLGFGNDSHALLPKELN 186
Query: 178 GLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDI 237
+ + ++ G H+ + + G ++++G + G+LG Q + P + S +++ +
Sbjct: 187 MGQSIHWVSCGYRHSALVTDSGDVYSFGESADGRLGLSAHQLANHSYPQRVESLHSVLQV 246
Query: 238 AAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTH 297
A GG H+ ALT+D E+Y +G GE G+LG G + P V + V+CG H
Sbjct: 247 ACGGKHTLALTED-ELYCFGGGEFGQLGLGTLVFVADS-PVAVGHFRKGRVTHVTCGEQH 304
Query: 298 SVALTRDGHIFSFGRGDHGRLGYGRKVTTGQ 328
S +T G +++FG G HG+LG+G + T Q
Sbjct: 305 SALITDSGLLYTFGDGRHGKLGHGDENFTNQ 335
Score = 192 (72.6 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 59/200 (29%), Positives = 92/200 (46%)
Query: 171 SVPVRVQGLEQVKL-IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGL 229
+VP R+ + + I+ G H+ + E G L+ +G+N GQLG P ++P+ V+ L
Sbjct: 24 NVPSRLWLKSDIPVHISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVL 83
Query: 230 SGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGD-NDKSSKMVPQKVNLLAGEDI 288
G +A G H+ T GE+ G G+LG G ND S Q++
Sbjct: 84 KGERAQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISF---QRLRPFCDYAP 140
Query: 289 VQVSCGGTH-SVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVD 347
+++ G H S ALT DG +F +G G+LG+G P E+ N G +
Sbjct: 141 IKLLSAGDHTSAALTEDGRLFLWGDNSAGQLGFGNDSHALLPKEL--------NMGQSI- 191
Query: 348 RRWIAKLVACGGRHTLAIVE 367
W V+CG RH+ + +
Sbjct: 192 -HW----VSCGYRHSALVTD 206
Score = 139 (54.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 65/269 (24%), Positives = 114/269 (42%)
Query: 3 STTSIIAWGSGEDGQLGIGN-NEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKT 61
S I+A G DGQLG+G+ N+ + + + ++ + AG S A+ +DG+
Sbjct: 103 SQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAGDHTSAALTEDGRLFL 162
Query: 62 --ENIPSQV------NALSNTKIVQAAIGGW------HCLAVDDQGRAYAWGGNEYGQCG 107
+N Q+ +AL ++ W H V D G Y++G + G+ G
Sbjct: 163 WGDNSAGQLGFGNDSHALLPKELNMGQSIHWVSCGYRHSALVTDSGDVYSFGESADGRLG 222
Query: 108 EEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI 167
+ + PQR V QVA GG H++ LT E ++ +G G+
Sbjct: 223 LSAHQLANHS--------YPQRVESLHSVLQVACGGKHTLALT-EDELYCFGG----GEF 269
Query: 168 KQISV---------PVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGD 216
Q+ + PV V + ++ + G H+ + + G L+ +G+ +G+LG GD
Sbjct: 270 GQLGLGTLVFVADSPVAVGHFRKGRVTHVTCGEQHSALITDSGLLYTFGDGRHGKLGHGD 329
Query: 217 TQPRSQ--PIPVQGLSGLTLVDIAAGGWH 243
+Q P Q +++ +A G H
Sbjct: 330 ENFTNQFTPTVCQRFFEYSVMTVACGSSH 358
>ZFIN|ZDB-GENE-090311-7 [details] [associations]
symbol:si:ch211-281g13.5 "si:ch211-281g13.5"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-7 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00899041
RefSeq:NP_001139103.1 UniGene:Dr.155114 Ensembl:ENSDART00000113315
GeneID:100148091 OMA:TLAWFPS NextBio:20791722 Uniprot:B8A4S7
Length = 992
Score = 293 (108.2 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 78/245 (31%), Positives = 121/245 (49%)
Query: 106 CGEEPE-RKDDTGRILRRD---IVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP 161
CGE D G++L D + P + V Q+A G HS+ L+ +G ++ WG+
Sbjct: 83 CGEAGAVLLADDGKVLIMDQSTVCRPLKSLENRQVIQIACGDQHSMALSNDGQLFVWGEN 142
Query: 162 WPPGDI----KQISV--PVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLG 213
G + +Q P +Q L ++ + I+ G H+ L G ++ WG+N GQLG
Sbjct: 143 -THGQLGLRKEQAGTQSPQHLQSLCEIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLG 201
Query: 214 TGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSS 273
GDT+ R P V+ L G V I+ GG H+ L+ G V+ +G G G+LG N
Sbjct: 202 LGDTKDRFVPTIVKSLCGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGH--NSLKD 259
Query: 274 KMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGH-IFSFGRGDHGRLGYGRKVTTGQPMEV 332
+ P+ + L G + QV+CG H++ I+SFG G G+LG G +V P+
Sbjct: 260 EHHPRLIAELWGSKVSQVTCGRHHTLVFEESSKLIYSFGCGMQGQLGNGEQVKQSVPL-- 317
Query: 333 PINIP 337
P+ +P
Sbjct: 318 PVLLP 322
Score = 289 (106.8 bits), Expect = 3.2e-24, P = 3.2e-24
Identities = 72/205 (35%), Positives = 100/205 (48%)
Query: 166 DIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ-PI 224
D + P++ QV IA G H++AL DG L+ WG N +GQLG Q +Q P
Sbjct: 101 DQSTVCRPLKSLENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQ 160
Query: 225 PVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLA 284
+Q L + + I+AGG HS L+ G V+GWG G+LG GD + VP V L
Sbjct: 161 HLQSLCEIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDT--KDRFVPTIVKSLC 218
Query: 285 GEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGD 344
G+ V +SCGG H+ L++ G +F+FG G G+LG+ P +
Sbjct: 219 GKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIA----------- 267
Query: 345 GVDRRWIAKL--VACGGRHTLAIVE 367
W +K+ V CG HTL E
Sbjct: 268 ---ELWGSKVSQVTCGRHHTLVFEE 289
Score = 286 (105.7 bits), Expect = 6.6e-24, P = 6.6e-24
Identities = 80/291 (27%), Positives = 137/291 (47%)
Query: 22 NNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKT---KTENIPSQVNALSNTKIVQ 78
+NE+ + L+ ++RS+V G ++ + DDGK + + +L N +++Q
Sbjct: 60 HNEDADEKLEPLQLQNERIRSIVCGEAGAVLLADDGKVLIMDQSTVCRPLKSLENRQVIQ 119
Query: 79 AAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQ 138
A G H +A+ + G+ + WG N +GQ G RK+ G + + C ++ V Q
Sbjct: 120 IACGDQHSMALSNDGQLFVWGENTHGQLGL---RKEQAGTQSPQHL--QSLC--EIPVAQ 172
Query: 139 VAAGGTHSVVLTREGHVWTWGQPWPP----GDIKQISVPVRVQGLEQVKLIAV--GAFHN 192
++AGG HS VL+ G V+ WG GD K VP V+ L K +++ G H
Sbjct: 173 ISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTVSISCGGEHT 232
Query: 193 LALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGE 252
L + G ++ +G+ +GQLG + P + L G + + G H+ + +
Sbjct: 233 ATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAELWGSKVSQVTCGRHHTLVFEESSK 292
Query: 253 -VYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQ-VSCGGTHSVAL 301
+Y +G G G+LG G+ K S +P + E ++ + G HS AL
Sbjct: 293 LIYSFGCGMQGQLGNGEQVKQSVPLPVLLPTECTEFTMEKLITGEHHSFAL 343
>UNIPROTKB|Q3MHW0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC104610
IPI:IPI00689945 RefSeq:NP_001069489.1 UniGene:Bt.1247
ProteinModelPortal:Q3MHW0 STRING:Q3MHW0 PRIDE:Q3MHW0
Ensembl:ENSBTAT00000007022 GeneID:534377 KEGG:bta:534377 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 InParanoid:Q3MHW0 KO:K15421
OMA:NIWAPKP OrthoDB:EOG4J1183 NextBio:20876380
PANTHER:PTHR22870:SF7 Uniprot:Q3MHW0
Length = 464
Score = 284 (105.0 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 95/306 (31%), Positives = 140/306 (45%)
Query: 82 GGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAA 141
GG H V D+G + G N+ GQ G T +L P + ++QVA
Sbjct: 57 GGGHSAVVTDEGSLFVCGLNKDGQLG-----LGHTEEVL---YFTPCKSLLGCAIQQVAC 108
Query: 142 GGTHSVVLTREGHVWT-----WGQPWPPGDIKQISVPVRVQGL-EQVKLIAVGAFHNLAL 195
G +++LT G V + +GQ P ++ +P ++ L E+V IA G H LA
Sbjct: 109 GWDFTIILTENGQVLSCGSNSFGQLGVPHGPRRCVIPQAIELLREKVVSIAAGLRHALAA 168
Query: 196 QEDGALWAWGNN--EYGQ-LGTGDTQP----RSQPIPVQGLSGLTLVDIAAGGWHSTALT 248
G ++ WG G+ L G T P +P V GL V + AG HS +LT
Sbjct: 169 TASGTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLT 228
Query: 249 DDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNL--LAGEDIVQVSCGGTHSVALTRDGH 306
D GE+Y WG +HG+L + + ++PQ++ E I V G TH VA T G
Sbjct: 229 DAGELYVWGSNKHGQLA---SQAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGK 285
Query: 307 IFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGD--GVDRRWI----AKLVACGGR 360
+F++GR D+G+LG R V T + E P+ +G G A ++CG
Sbjct: 286 VFTWGRADYGQLG--RTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTGATEISCGSE 343
Query: 361 HTLAIV 366
H LA++
Sbjct: 344 HNLAVI 349
Score = 197 (74.4 bits), Expect = 6.1e-13, P = 6.1e-13
Identities = 53/187 (28%), Positives = 91/187 (48%)
Query: 182 VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGG 241
+K I G H+ + ++G+L+ G N+ GQLG G T+ P + L G + +A G
Sbjct: 51 IKRITGGGGHSAVVTDEGSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACG- 109
Query: 242 WHSTA-LTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVA 300
W T LT++G+V G G+LG + ++PQ + LL E +V ++ G H++A
Sbjct: 110 WDFTIILTENGQVLSCGSNSFGQLGVPHGPRRC-VIPQAIELLR-EKVVSIAAGLRHALA 167
Query: 301 LTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGR 360
T G +F +G G GR++ GQ + + + P G++ A V G
Sbjct: 168 ATASGTVFQWGTG---LASSGRRLCPGQTLPLFLTAKEPSTV-TGLENSQ-AVCVLAGSD 222
Query: 361 HTLAIVE 367
H+ ++ +
Sbjct: 223 HSASLTD 229
Score = 195 (73.7 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 73/244 (29%), Positives = 106/244 (43%)
Query: 88 AVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSV 147
AV +AWG N YGQ G K+D + C ++++ GG HS
Sbjct: 10 AVPTAAALFAWGANSYGQLGLG--HKEDVLSAQQLSDFCKSGC-----IKRITGGGGHSA 62
Query: 148 VLTREGHVWTWGQPWPP----GDIKQISVPVRVQGLE--QVKLIAVGAFHNLALQEDGAL 201
V+T EG ++ G G +++ + L ++ +A G + L E+G +
Sbjct: 63 VVTDEGSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIILTENGQV 122
Query: 202 WAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLT--LVDIAAGGWHSTALTDDGEVYGWGRG 259
+ G+N +GQLG PR IP Q + L +V IAAG H+ A T G V+ WG G
Sbjct: 123 LSCGSNSFGQLGVPHG-PRRCVIP-QAIELLREKVVSIAAGLRHALAATASGTVFQWGTG 180
Query: 260 --EHGR-LGFGDNDKS--SKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGD 314
GR L G + P V L V V G HS +LT G ++ +G
Sbjct: 181 LASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSNK 240
Query: 315 HGRL 318
HG+L
Sbjct: 241 HGQL 244
Score = 186 (70.5 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 51/144 (35%), Positives = 76/144 (52%)
Query: 194 ALQEDGALWAWGNNEYGQLGTGDTQP--RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDG 251
A+ AL+AWG N YGQLG G + +Q + SG + I GG HS +TD+G
Sbjct: 10 AVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGC-IKRITGGGGHSAVVTDEG 68
Query: 252 EVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFG 311
++ G + G+LG G ++ P K +LL G I QV+CG ++ LT +G + S G
Sbjct: 69 SLFVCGLNKDGQLGLGHTEEVLYFTPCK-SLL-GCAIQQVACGWDFTIILTENGQVLSCG 126
Query: 312 RGDHGRLG--YG-RKVTTGQPMEV 332
G+LG +G R+ Q +E+
Sbjct: 127 SNSFGQLGVPHGPRRCVIPQAIEL 150
Score = 174 (66.3 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
Identities = 61/214 (28%), Positives = 100/214 (46%)
Query: 173 PVRVQGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDT-QPRSQPIPVQGL 229
P V GLE + + V G+ H+ +L + G L+ WG+N++GQL + Q I +
Sbjct: 203 PSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQLASQAAFLLLPQRIEARCF 262
Query: 230 SGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGF------G-DNDKSSKMVP----Q 278
+ + +G H A T G+V+ WGR ++G+LG G +++K +P Q
Sbjct: 263 QNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLGRTVETREGWESEKQDPSLPGSGPQ 322
Query: 279 K-----VNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVP 333
K + L G ++SCG H++A+ G S+G +HG G G + P VP
Sbjct: 323 KGTPSCLPCLTGA--TEISCGSEHNLAVI-GGVCHSWGWNEHGMCGDGTEADVWAPKPVP 379
Query: 334 INIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
G+ R ++ V CG H+LA+ +
Sbjct: 380 -----------GL-RFFLGLHVGCGAGHSLALCQ 401
Score = 173 (66.0 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 63/209 (30%), Positives = 82/209 (39%)
Query: 61 TENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRIL 120
T PS V L N++ V G H ++ D G Y WG N++GQ + L
Sbjct: 199 TAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQLASQ-------AAFL 251
Query: 121 RRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP--------------W---- 162
I RC + V +G TH V T G V+TWG+ W
Sbjct: 252 LLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLGRTVETREGWESEK 311
Query: 163 --P--PGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQ 218
P PG Q P + L I+ G+ HNLA+ G +WG NE+G G G
Sbjct: 312 QDPSLPGSGPQKGTPSCLPCLTGATEISCGSEHNLAVI-GGVCHSWGWNEHGMCGDGTEA 370
Query: 219 PRSQPIPVQGLSGLTLVDIAAGGWHSTAL 247
P PV GL + + G HS AL
Sbjct: 371 DVWAPKPVPGLRFFLGLHVGCGAGHSLAL 399
Score = 120 (47.3 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 48/161 (29%), Positives = 74/161 (45%)
Query: 64 IPSQVNA--LSNTKIVQAAIGGW-HCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRIL 120
+P ++ A N KI A GW H +A G+ + WG +YGQ G E ++
Sbjct: 253 LPQRIEARCFQNEKIA-AVWSGWTHLVAQTVTGKVFTWGRADYGQLGRTVETREGW-ESE 310
Query: 121 RRDIVIP----QR----CAPKLI-VRQVAAGGTHSV-VLTREGHVWTWGQPWPPGDIKQI 170
++D +P Q+ C P L +++ G H++ V+ H W W + GD +
Sbjct: 311 KQDPSLPGSGPQKGTPSCLPCLTGATEISCGSEHNLAVIGGVCHSWGWNEHGMCGDGTEA 370
Query: 171 SV--PVRVQGLEQ-VKL-IAVGAFHNLALQEDGALWAWGNN 207
V P V GL + L + GA H+LAL + AL A G +
Sbjct: 371 DVWAPKPVPGLRFFLGLHVGCGAGHSLALCQLPALPALGQH 411
Score = 88 (36.0 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
Identities = 48/173 (27%), Positives = 73/173 (42%)
Query: 3 STTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPY-K---VRSVVAGSRNSLAICDDGK 58
+ ++ AWG+ GQLG+G+ E+ V + L + K ++ + G +S + D+G
Sbjct: 13 TAAALFAWGANSYGQLGLGHKED---VLSAQQLSDFCKSGCIKRITGGGGHSAVVTDEGS 69
Query: 59 TKT--ENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGN----EYGQ---CGEE 109
N Q+ L +T+ V L Q A W E GQ CG
Sbjct: 70 LFVCGLNKDGQLG-LGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIILTENGQVLSCGSN 128
Query: 110 PERKDDTGRILRRDIVIPQRCAPKLI---VRQVAAGGTHSVVLTREGHVWTWG 159
+ RR VIPQ A +L+ V +AAG H++ T G V+ WG
Sbjct: 129 SFGQLGVPHGPRR-CVIPQ--AIELLREKVVSIAAGLRHALAATASGTVFQWG 178
Score = 37 (18.1 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 7 IIAWGSGEDGQL 18
+ WGS + GQL
Sbjct: 233 LYVWGSNKHGQL 244
>UNIPROTKB|F1P3N0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AADN02026016
EMBL:AADN02026017 IPI:IPI00579944 Ensembl:ENSGALT00000001779
Uniprot:F1P3N0
Length = 454
Score = 283 (104.7 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 101/324 (31%), Positives = 149/324 (45%)
Query: 64 IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRD 123
IP + T+++Q + G H L + D + G N YGQCG RK I
Sbjct: 155 IPLPLEKPQKTRVLQVSCGRAHSLVLTDSEGVFTMGNNSYGQCG----RKVVEDEIYSES 210
Query: 124 IVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWT--WGQPWPPG--DIKQISVPVRVQG- 178
+I Q V QV G HS+ T++G V+ WG G SVP ++ G
Sbjct: 211 HLIHQLNDFDSRVVQVVCGQDHSLFRTKKGAVFACGWGADGQTGLGHYNITSVPTKLGGD 270
Query: 179 LEQVKLIAVGAFHN--LALQEDGALWAWGNNEYGQLG--TGDTQ---PRSQPIPVQGLSG 231
+ V ++ V ++ + LA+ ++G L+ WGN+EY QL T TQ PR P + +
Sbjct: 271 IAGVNIVQVSSYGDCCLAVSDEGDLFGWGNSEYLQLASVTETTQVNVPRHLPFKIGKIK- 329
Query: 232 LTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV--NLLAGED-- 287
+ A GG + LT++G V+ WG +G LG G N + VP+ + +L D
Sbjct: 330 ----EAACGGTGNIVLTEEGAVFVWG---YGILGKGPN-LTETAVPEMIPPSLFGWSDFS 381
Query: 288 ----IVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAG 343
+ +V CG +H ALT G +F +G+ G LG GR P V IP G
Sbjct: 382 SDVRVARVRCGLSHFAALTNRGELFVWGKNLRGCLGIGRMEDQYFPWRV--TIP-----G 434
Query: 344 DGVDRRWIAKLVACGGRHTLAIVE 367
+ VD VACG H +++V+
Sbjct: 435 EVVD-------VACGVDHMVSMVK 451
Score = 127 (49.8 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 46/180 (25%), Positives = 77/180 (42%)
Query: 171 SVPVRVQGLEQVKLIAVG-AFHNLALQEDGA--LWAWGNNEYGQLGTGDT---------- 217
+ P R++ E++ A G F L+ +W G N+ QLG +
Sbjct: 89 ATPYRLETEEKITSAACGYGFTLLSSNTTDITKVWGMGLNKDSQLGFQRSIRDRTKGYEY 148
Query: 218 --QPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLG---FGDNDKS 272
+P P+P++ ++ ++ G HS LTD V+ G +G+ G D S
Sbjct: 149 VLEPSPIPLPLEKPQKTRVLQVSCGRAHSLVLTDSEGVFTMGNNSYGQCGRKVVEDEIYS 208
Query: 273 SKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
+ ++N +VQV CG HS+ T+ G +F+ G G G+ G G T P ++
Sbjct: 209 ESHLIHQLNDFDSR-VVQVVCGQDHSLFRTKKGAVFACGWGADGQTGLGHYNITSVPTKL 267
>UNIPROTKB|E1BIS5 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
EMBL:DAAA02058190 IPI:IPI00705939 RefSeq:NP_001179275.1
UniGene:Bt.1520 Ensembl:ENSBTAT00000015608 GeneID:513273
KEGG:bta:513273 NextBio:20870790 Uniprot:E1BIS5
Length = 464
Score = 282 (104.3 bits), Expect = 2.3e-24, P = 2.3e-24
Identities = 99/308 (32%), Positives = 143/308 (46%)
Query: 64 IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE---EPERKDDTGRIL 120
+P ++ T+++Q + G H L + D ++ G N YGQCG E E ++ R+
Sbjct: 164 VPLPLDRPQETRVLQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHRVH 223
Query: 121 RRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWT--WGQPWPPG--DIKQISVPVRV 176
R Q V QVA G HS+ LT +G V++ WG G S P ++
Sbjct: 224 RMQDFDGQ-------VVQVACGQDHSLFLTDQGEVYSCGWGADGQTGLGHYNITSTPTKL 276
Query: 177 QG-LEQVKLIAVGAFHN--LALQEDGALWAWGNNEYGQLG--TGDTQ---PRSQPIPVQG 228
G L V ++ V + + LA+ DG L+ WGN+EY QL T TQ PR P
Sbjct: 277 GGDLAGVNVVQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLPF---- 332
Query: 229 LSGLTLVDIAA-GGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSS---KMVPQKVNLLA 284
SG+ V AA GG L +G V+ WG +G LG G N + +M+P + L+
Sbjct: 333 -SGVGQVKQAACGGTGCAVLNGEGHVFVWG---YGILGKGPNLLETALPEMIPPTLFGLS 388
Query: 285 ----GEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPA-P 339
G + ++ CG +H ALT G +F +G+ G LG GR P V +P P
Sbjct: 389 EFNPGVQVSRIRCGLSHFAALTNRGELFVWGKNIRGCLGIGRLEDQYFPWRV--TMPGEP 446
Query: 340 RNAGDGVD 347
+ GVD
Sbjct: 447 MDVACGVD 454
Score = 226 (84.6 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 92/310 (29%), Positives = 141/310 (45%)
Query: 75 KIVQAAIG-GWHCLAVDDQGRAYAWG-G-NEYGQCGEEPERKDDT-GR--ILRRDIV-IP 127
KI AA G G+ L+ + WG G N+ Q G RKD T G +L V +P
Sbjct: 108 KISSAACGYGFTLLSSKTKDITKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLP 167
Query: 128 QRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG--------QPWPPGDIKQISVPV-RVQG 178
+ V QV+ G HS+VLT V++ G + +I S V R+Q
Sbjct: 168 LDRPQETRVLQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQD 227
Query: 179 LE-QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQG-LSGLTLVD 236
+ QV +A G H+L L + G +++ G GQ G G S P + G L+G+ +V
Sbjct: 228 FDGQVVQVACGQDHSLFLTDQGEVYSCGWGADGQTGLGHYNITSTPTKLGGDLAGVNVVQ 287
Query: 237 IAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGT 296
+A G A++ DG ++GWG E+ +L D + VP+ + + Q +CGGT
Sbjct: 288 VATYGDCCLAVSADGGLFGWGNSEYLQLA-SVTDSTQVNVPRCLPFSGVGQVKQAACGGT 346
Query: 297 HSVALTRDGHIFSFGRGDHGRLGYGRKVT-TGQPMEVPINIPAPRNAGDGVDRRWIAKLV 355
L +GH+F +G +G LG G + T P +P + GV +++ +
Sbjct: 347 GCAVLNGEGHVFVWG---YGILGKGPNLLETALPEMIPPTLFGLSEFNPGVQ---VSR-I 399
Query: 356 ACGGRHTLAI 365
CG H A+
Sbjct: 400 RCGLSHFAAL 409
Score = 194 (73.4 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 77/245 (31%), Positives = 110/245 (44%)
Query: 75 KIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKL 134
++VQ A G H L + DQG Y+ G GQ G T L D+ +
Sbjct: 231 QVVQVACGQDHSLFLTDQGEVYSCGWGADGQTGLGHYNITSTPTKLGGDLA-------GV 283
Query: 135 IVRQVAAGGTHSVVLTREGHVWTWG-----QPWPPGDIKQISVP--VRVQGLEQVKLIAV 187
V QVA G + ++ +G ++ WG Q D Q++VP + G+ QVK A
Sbjct: 284 NVVQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGQVKQAAC 343
Query: 188 GAFHNLALQEDGALWAWGNNEYGQLGTG----DTQ-PRSQPIPVQGLS----GLTLVDIA 238
G L +G ++ WG YG LG G +T P P + GLS G+ + I
Sbjct: 344 GGTGCAVLNGEGHVFVWG---YGILGKGPNLLETALPEMIPPTLFGLSEFNPGVQVSRIR 400
Query: 239 AGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHS 298
G H ALT+ GE++ WG+ G LG G + + P +V + GE + V+CG H
Sbjct: 401 CGLSHFAALTNRGELFVWGKNIRGCLGIGRLE--DQYFPWRVTM-PGEPM-DVACGVDHM 456
Query: 299 VALTR 303
V L R
Sbjct: 457 VTLAR 461
>DICTYBASE|DDB_G0269934 [details] [associations]
symbol:DDB_G0269934 "Ras GTPase activation
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0051056 "regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=IEA] [GO:0035023 "regulation of Rho
protein signal transduction" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001936
InterPro:IPR008936 Pfam:PF00616 Pfam:PF00621 PROSITE:PS50010
PROSITE:PS50018 SMART:SM00323 dictyBase:DDB_G0269934
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007165 EMBL:AAFI02000005
GO:GO:0005096 GO:GO:0043547 SUPFAM:SSF48350 GO:GO:0005622
GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 Gene3D:1.10.506.10 eggNOG:COG5261
RefSeq:XP_646416.1 ProteinModelPortal:Q55CR5
EnsemblProtists:DDB0233497 GeneID:8617373 KEGG:ddi:DDB_G0269934
InParanoid:Q55CR5 OMA:SHTEYEN Uniprot:Q55CR5
Length = 2044
Score = 293 (108.2 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 82/284 (28%), Positives = 132/284 (46%)
Query: 42 SVVAGSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIGGW-HCLAVD-DQGRAY-AW 98
S + S S + D+ + T P+ + S ++ H A+ D R W
Sbjct: 659 SSCSASNLSNVLADNSGSSTGTTPTDGFSSSPPNGQSPSLSSTAHRSAIHLDTSRGLMTW 718
Query: 99 GGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTW 158
G + G + KD + R +P P + +++G +S VLT G V+ W
Sbjct: 719 GSASNCKLGFKVTAKDQSQPTPER---LPNFNIPDIC--SISSGSYYSSVLTENGDVYLW 773
Query: 159 GQ-----PWPPG-DIKQIS---VPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEY 209
G+ P P I QI +P +++ L V +++G H A++ +G L WG E
Sbjct: 774 GRGAVKTPAVPILGIPQIEDQLLPFKLESLSDVVSVSIGFCHGAAVRANGELLTWGVGEN 833
Query: 210 GQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDN 269
GQLG GDT + +P +Q L+ + + G H+ LT +G+VY WG E+G+LG GD
Sbjct: 834 GQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGASEYGQLGLGDV 893
Query: 270 DKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRG 313
+ S P +V+ L +++Q++ G TH LT + FG G
Sbjct: 894 TQHSS--PMQVSALEKYNVLQIASGSTHCAVLTTSKEVLVFGNG 935
Score = 289 (106.8 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 82/262 (31%), Positives = 125/262 (47%)
Query: 64 IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRD 123
+P ++ +LS+ +V +IG H AV G WG E GQ G DT +
Sbjct: 796 LPFKLESLSD--VVSVSIGFCHGAAVRANGELLTWGVGENGQLGH-----GDTNNQIEPK 848
Query: 124 IVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----WPPGDIKQISVPVRVQGL 179
I+ + + QV G H++ LT+ G V++WG GD+ Q S P++V L
Sbjct: 849 II---QSLTSFWITQVQCGEKHTICLTKNGKVYSWGASEYGQLGLGDVTQHSSPMQVSAL 905
Query: 180 EQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDI 237
E+ + IA G+ H L + +GN +G S P V L L + +
Sbjct: 906 EKYNVLQIASGSTHCAVLTTSKEVLVFGNG--AAMGAASVV--SLPTLVPSLKYLHIDRL 961
Query: 238 AAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTH 297
G + + A+T+ G+VY WG G+ LG G N S++ P+ + L + I Q+SCGG H
Sbjct: 962 CCGHYSTAAITECGDVYTWGTGQE--LGHGGN--STETSPKLIEALRNQSIRQISCGGRH 1017
Query: 298 SVALTRDGHIFSFGRGDHGRLG 319
+ LT G IF+ G+ G+LG
Sbjct: 1018 TAFLTDSGRIFTCGKDSFGQLG 1039
Score = 280 (103.6 bits), Expect = 7.9e-23, P = 7.9e-23
Identities = 68/247 (27%), Positives = 115/247 (46%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDT 116
G T + P + +L++ I Q G H + + G+ Y+WG +EYGQ G
Sbjct: 839 GDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGASEYGQLG--------L 890
Query: 117 GRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRV 176
G + + + K V Q+A+G TH VLT V +G G +S+P V
Sbjct: 891 GDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLVFGNGAAMGAASVVSLPTLV 950
Query: 177 QGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTL 234
L+ + + + G + A+ E G ++ WG + +LG G + P ++ L ++
Sbjct: 951 PSLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQ--ELGHGGNSTETSPKLIEALRNQSI 1008
Query: 235 VDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCG 294
I+ GG H+ LTD G ++ G+ G+LG D++ P+++ L + VSCG
Sbjct: 1009 RQISCGGRHTAFLTDSGRIFTCGKDSFGQLGQMSGDQNK---PKRIESLTKTTFISVSCG 1065
Query: 295 GTHSVAL 301
++VAL
Sbjct: 1066 ENYNVAL 1072
Score = 217 (81.4 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 47/153 (30%), Positives = 84/153 (54%)
Query: 185 IAVGAFHNLALQEDGALWAWGNNEYGQ-----LGTGDTQPRSQPIPVQGLSGLTLVDIAA 239
I+ G++++ L E+G ++ WG LG + + P ++ LS + V ++
Sbjct: 754 ISSGSYYSSVLTENGDVYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLSDV--VSVSI 811
Query: 240 GGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSV 299
G H A+ +GE+ WG GE+G+LG GD + +++ P+ + L I QV CG H++
Sbjct: 812 GFCHGAAVRANGELLTWGVGENGQLGHGDTN--NQIEPKIIQSLTSFWITQVQCGEKHTI 869
Query: 300 ALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
LT++G ++S+G ++G+LG G PM+V
Sbjct: 870 CLTKNGKVYSWGASEYGQLGLGDVTQHSSPMQV 902
Score = 176 (67.0 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 58/265 (21%), Positives = 116/265 (43%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKT----- 61
++ WG GE+GQLG G+ + ++++L + + V G ++++ + +GK +
Sbjct: 825 LLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGASE 884
Query: 62 -----------ENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEP 110
+ P QV+AL ++Q A G HC + +G G
Sbjct: 885 YGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLVFGNG--AAMG--- 939
Query: 111 ERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG--QPWPPGDIK 168
++ ++P L + ++ G + +T G V+TWG Q G
Sbjct: 940 -----AASVVSLPTLVPS--LKYLHIDRLCCGHYSTAAITECGDVYTWGTGQELGHGGNS 992
Query: 169 QISVPVRVQGL--EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLG--TGDTQPRSQPI 224
+ P ++ L + ++ I+ G H L + G ++ G + +GQLG +GD +++P
Sbjct: 993 TETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQLGQMSGD---QNKPK 1049
Query: 225 PVQGLSGLTLVDIAAGGWHSTALTD 249
++ L+ T + ++ G ++ AL D
Sbjct: 1050 RIESLTKTTFISVSCGENYNVALFD 1074
Score = 175 (66.7 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 55/186 (29%), Positives = 93/186 (50%)
Query: 191 HNLALQEDGA--LWAWGNNEYGQLGTGDT-QPRSQPIPVQGLSGLTLVDI---AAGGWHS 244
H A+ D + L WG+ +LG T + +SQP P + L + DI ++G ++S
Sbjct: 703 HRSAIHLDTSRGLMTWGSASNCKLGFKVTAKDQSQPTP-ERLPNFNIPDICSISSGSYYS 761
Query: 245 TALTDDGEVYGWGRGEHGRLG---FGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVAL 301
+ LT++G+VY WGRG G +++P K+ L+ D+V VS G H A+
Sbjct: 762 SVLTENGDVYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLS--DVVSVSIGFCHGAAV 819
Query: 302 TRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRH 361
+G + ++G G++G+LG+G T +E I + WI + V CG +H
Sbjct: 820 RANGELLTWGVGENGQLGHG---DTNNQIEPKII--------QSLTSFWITQ-VQCGEKH 867
Query: 362 TLAIVE 367
T+ + +
Sbjct: 868 TICLTK 873
>ZFIN|ZDB-GENE-070402-2 [details] [associations]
symbol:als2a "amyotrophic lateral sclerosis 2a
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0005769 "early endosome" evidence=ISS] [GO:0016197 "endosomal
transport" evidence=ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=ISS] [GO:0005813 "centrosome" evidence=ISS]
[GO:0014069 "postsynaptic density" evidence=ISS] [GO:0007528
"neuromuscular junction development" evidence=ISS] [GO:0030424
"axon" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043197 "dendritic spine" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] InterPro:IPR000219 Pfam:PF00621 PROSITE:PS50010
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-070402-2
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:BK005193
UniGene:Dr.102729 ProteinModelPortal:I7L9G3 Uniprot:I7L9G3
Length = 1590
Score = 240 (89.5 bits), Expect = 5.0e-17, P = 5.0e-17
Identities = 62/189 (32%), Positives = 95/189 (50%)
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG-QPWPPGDIKQISVPVR--VQGLEQ 181
V P++ V A G H ++L G V+++G QPW P + S+ + + G +
Sbjct: 23 VSPEKLLLSRPVLHAALGSLHGLLLIEGGQVYSFGEQPWKPVEPPPASLVLESTLSG-QH 81
Query: 182 VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLT-------L 234
V ++ G++H A+ EDG + WG N YGQ G T P PV + T +
Sbjct: 82 VISVSAGSYHCSAVTEDGLVLMWGENSYGQCGVSGTDRVPSPTPVTVVDDETHPPQLVRV 141
Query: 235 VDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCG 294
+++A G H+ AL++ EV+ WG G +LG N PQKV L G +VQ++CG
Sbjct: 142 LNVACGAQHTLALSNKHEVWAWGSG--CQLGLVTN-VFPVWKPQKVEHLVGRYVVQIACG 198
Query: 295 GTHSVALTR 303
HS+AL +
Sbjct: 199 AFHSLALVQ 207
Score = 187 (70.9 bits), Expect = 3.4e-24, Sum P(2) = 3.4e-24
Identities = 47/130 (36%), Positives = 67/130 (51%)
Query: 201 LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGE 260
+W+WG GQLG GD PR QP+ ++ LS +V I AG HS ALT +VY WG +
Sbjct: 522 VWSWGKGHEGQLGHGDYLPRLQPLCIKSLSKKEVVKITAGANHSLALTAQCQVYSWGSEK 581
Query: 261 HGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFS---FGRGDHGR 317
G+LG S VP + G + V+ G TH++ L DG + + G+ +
Sbjct: 582 FGQLG---RMNSPSTVPNLTTVSDGIRVWDVAAGQTHTLLLA-DGDCYQPILYYSGE--Q 635
Query: 318 LGYGRKVTTG 327
+GY +V G
Sbjct: 636 IGYVNQVFGG 645
Score = 174 (66.3 bits), Expect = 3.4e-24, Sum P(2) = 3.4e-24
Identities = 44/134 (32%), Positives = 66/134 (49%)
Query: 69 NALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE-PERKDDTGRILRRDIVIP 127
+ LS ++ + G +HC AV + G WG N YGQCG +R + +V
Sbjct: 75 STLSGQHVISVSAGSYHCSAVTEDGLVLMWGENSYGQCGVSGTDRVPSPTPVT---VVDD 131
Query: 128 QRCAPKLI-VRQVAAGGTHSVVLTREGHVWTWGQPWPPG---DIKQISVPVRVQGL--EQ 181
+ P+L+ V VA G H++ L+ + VW WG G ++ + P +V+ L
Sbjct: 132 ETHPPQLVRVLNVACGAQHTLALSNKHEVWAWGSGCQLGLVTNVFPVWKPQKVEHLVGRY 191
Query: 182 VKLIAVGAFHNLAL 195
V IA GAFH+LAL
Sbjct: 192 VVQIACGAFHSLAL 205
Score = 173 (66.0 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 51/190 (26%), Positives = 97/190 (51%)
Query: 186 AVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHST 245
A+G+ H L L E G ++++G + + + P S + LSG ++ ++AG +H +
Sbjct: 38 ALGSLHGLLLIEGGQVYSFGEQPWKPV---EPPPASLVLE-STLSGQHVISVSAGSYHCS 93
Query: 246 ALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGED-------IVQVSCGGTHS 298
A+T+DG V WG +G+ G D+ P V ++ E ++ V+CG H+
Sbjct: 94 AVTEDGLVLMWGENSYGQCGVSGTDRVPSPTP--VTVVDDETHPPQLVRVLNVACGAQHT 151
Query: 299 VALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACG 358
+AL+ ++++G G +LG VT P+ P + + + R++ + +ACG
Sbjct: 152 LALSNKHEVWAWGSGC--QLGL---VTNVFPVWKPQKV-------EHLVGRYVVQ-IACG 198
Query: 359 GRHTLAIVEW 368
H+LA+V++
Sbjct: 199 AFHSLALVQF 208
Score = 147 (56.8 bits), Expect = 6.9e-20, Sum P(2) = 6.9e-20
Identities = 37/116 (31%), Positives = 59/116 (50%)
Query: 252 EVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFG 311
EV+ WG+G G+LG GD ++ P + L+ +++V+++ G HS+ALT ++S+G
Sbjct: 521 EVWSWGKGHEGQLGHGDY--LPRLQPLCIKSLSKKEVVKITAGANHSLALTAQCQVYSWG 578
Query: 312 RGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
G+LG M P +P DG+ R W VA G HTL + +
Sbjct: 579 SEKFGQLGR---------MNSPSTVPNLTTVSDGI-RVWD---VAAGQTHTLLLAD 621
Score = 131 (51.2 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 56/191 (29%), Positives = 87/191 (45%)
Query: 71 LSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRC 130
L + ++ AA+G H L + + G+ Y++G E+P + + +V+
Sbjct: 29 LLSRPVLHAALGSLHGLLLIEGGQVYSFG--------EQPWKPVEPPPA---SLVLESTL 77
Query: 131 APKLIVRQVAAGGTHSVVLTREGHVWTWG-----QPWPPGDIKQIS-VPVRVQG------ 178
+ + ++ V+AG H +T +G V WG Q G + S PV V
Sbjct: 78 SGQHVI-SVSAGSYHCSAVTEDGLVLMWGENSYGQCGVSGTDRVPSPTPVTVVDDETHPP 136
Query: 179 -LEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLG-TGDTQPRSQPIPVQGLSGLTLVD 236
L +V +A GA H LAL +WAWG+ QLG + P +P V+ L G +V
Sbjct: 137 QLVRVLNVACGAQHTLALSNKHEVWAWGSG--CQLGLVTNVFPVWKPQKVEHLVGRYVVQ 194
Query: 237 IAAGGWHSTAL 247
IA G +HS AL
Sbjct: 195 IACGAFHSLAL 205
Score = 128 (50.1 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 35/106 (33%), Positives = 56/106 (52%)
Query: 155 VWTWGQPWPP----GDIKQISVPVRVQGL--EQVKLIAVGAFHNLALQEDGALWAWGNNE 208
VW+WG+ GD P+ ++ L ++V I GA H+LAL +++WG+ +
Sbjct: 522 VWSWGKGHEGQLGHGDYLPRLQPLCIKSLSKKEVVKITAGANHSLALTAQCQVYSWGSEK 581
Query: 209 YGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVY 254
+GQLG ++ P + P G+ + D+AAG H T L DG+ Y
Sbjct: 582 FGQLGRMNS-PSTVPNLTTVSDGIRVWDVAAGQTH-TLLLADGDCY 625
Score = 58 (25.5 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 20/98 (20%), Positives = 45/98 (45%)
Query: 268 DNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTG 327
D + S + P + + V+ S + ++ + ++S+G+G G+LG+G +
Sbjct: 483 DRNSFSPVSPSDTHRTSNLRAVRASTSESRNLLPSLFTEVWSWGKGHEGQLGHGDYLPRL 542
Query: 328 QPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
QP+ + + ++ + K+ A G H+LA+
Sbjct: 543 QPLCIK-----------SLSKKEVVKITA-GANHSLAL 568
Score = 46 (21.3 bits), Expect = 4.9e-11, Sum P(3) = 4.9e-11
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAV 89
P +V L +VQ A G +H LA+
Sbjct: 181 PQKVEHLVGRYVVQIACGAFHSLAL 205
Score = 43 (20.2 bits), Expect = 4.9e-11, Sum P(3) = 4.9e-11
Identities = 13/54 (24%), Positives = 25/54 (46%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALE-----PYKVR--SVVAGSRNSLAI 53
++ WG GQ G+ + V ++ P VR +V G++++LA+
Sbjct: 101 VLMWGENSYGQCGVSGTDRVPSPTPVTVVDDETHPPQLVRVLNVACGAQHTLAL 154
Score = 37 (18.1 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 40 VRSVVAGSRNSLAICDDG 57
V SV AGS + A+ +DG
Sbjct: 82 VISVSAGSYHCSAVTEDG 99
>ZFIN|ZDB-GENE-061220-11 [details] [associations]
symbol:sergef "secretion regulating guanine
nucleotide exchange factor" species:7955 "Danio rerio" [GO:0050709
"negative regulation of protein secretion" evidence=IEA]
InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-061220-11 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HOGENOM:HOG000154414 HOVERGEN:HBG051746
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:BC124691
IPI:IPI00490832 UniGene:Dr.91496 InParanoid:Q08BJ6 Uniprot:Q08BJ6
Length = 423
Score = 248 (92.4 bits), Expect = 4.2e-24, Sum P(2) = 4.2e-24
Identities = 91/313 (29%), Positives = 137/313 (43%)
Query: 77 VQAAIGGWH-CLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIP-QRCAPKL 134
VQ GW + + G A G N +GQ G E+ +L + P A L
Sbjct: 125 VQQVSCGWDFTIILTGDGLVLACGSNAFGQLGVSAEKTHSAEPLLLKSFHEPVTSVAAGL 184
Query: 135 --IVRQVAAGGTHSVVLTREGHVWTWGQPWP-PGDIKQISVPVRVQGLEQV---KLIAVG 188
+ A+G + H P P P + P V G V K+IA G
Sbjct: 185 RHALASTASGCVYQWGTGLSSHAKRMLNPQPVPSHLSS-KEPCLVPGFAHVTTQKVIA-G 242
Query: 189 AFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPV----QGLSGLTLVDIAAGGWHS 244
+ H L +G L+ WG+N++GQL +G P+PV L + D+ +G H
Sbjct: 243 SAHCACLTVNGELFLWGSNKHGQLISGSL---FLPLPVALDRSMLQDERVSDVHSGWTHL 299
Query: 245 TALTDDGEVYGWGRGEHGRLGFGDN--DKSS---KMVPQKVNLLAGEDIVQVSCGGTHSV 299
A T+ G V+ WGR +G+LG ++ +K S +V V + A Q+SCG H++
Sbjct: 300 VAQTESGRVFTWGRSNYGQLGQTNHSMEKQSCDEHLVRSPVEVKALFGATQISCGSEHNL 359
Query: 300 ALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGG 359
A+ G +FS+G +HG G G QP PI PA +A +A L+ CG
Sbjct: 360 AVV-GGRVFSWGWNEHGMCGDGSLQDITQPQ--PI--PALADA--------VALLIGCGA 406
Query: 360 RHTLAIVEWQTEE 372
H++A+ ++ E
Sbjct: 407 GHSMALCSLKSSE 419
Score = 235 (87.8 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 89/334 (26%), Positives = 141/334 (42%)
Query: 49 NSLAICDDGKTKTENIPSQVNA-LSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 107
NS G + + P +V + L +I GG H + D G G N GQ G
Sbjct: 45 NSYGQLGQGNAEDQAEPRRVESGLQEEQIRAVTGGGGHSALISDSGELLVCGQNHKGQLG 104
Query: 108 EEPERKDDTGRILRRDIVIPQRCA-PKL-IVRQVAAGGTHSVVLTREGHVWT-----WGQ 160
G L +I+ Q C P V+QV+ G +++LT +G V +GQ
Sbjct: 105 --------LGHTL--EIMTFQTCPLPGFGRVQQVSCGWDFTIILTGDGLVLACGSNAFGQ 154
Query: 161 PWPPGDIKQISVPVRVQGL-EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTG-DTQ 218
+ + P+ ++ E V +A G H LA G ++ WG + Q
Sbjct: 155 LGVSAEKTHSAEPLLLKSFHEPVTSVAAGLRHALASTASGCVYQWGTGLSSHAKRMLNPQ 214
Query: 219 P------RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKS 272
P +P V G + +T + AG H LT +GE++ WG +HG+L G
Sbjct: 215 PVPSHLSSKEPCLVPGFAHVTTQKVIAGSAHCACLTVNGELFLWGSNKHGQLISGSLFLP 274
Query: 273 SKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
+ + ++L E + V G TH VA T G +F++GR ++G+LG Q +
Sbjct: 275 LPVALDR-SMLQDERVSDVHSGWTHLVAQTESGRVFTWGRSNYGQLGQTNHSMEKQSCDE 333
Query: 333 PINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIV 366
+ + +P V + A ++CG H LA+V
Sbjct: 334 HL-VRSPVE----VKALFGATQISCGSEHNLAVV 362
Score = 190 (71.9 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 64/235 (27%), Positives = 100/235 (42%)
Query: 96 YAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHV 155
Y WG N YGQ G+ R + + Q +R V GG HS +++ G +
Sbjct: 40 YTWGANSYGQLGQGNAEDQAEPRRVESGLQEEQ-------IRAVTGGGGHSALISDSGEL 92
Query: 156 WTWGQPWPP----GDIKQISV--PVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEY 209
GQ G +I + G +V+ ++ G + L DG + A G+N +
Sbjct: 93 LVCGQNHKGQLGLGHTLEIMTFQTCPLPGFGRVQQVSCGWDFTIILTGDGLVLACGSNAF 152
Query: 210 GQLGTGDTQPRS-QPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRG--EHGRLGF 266
GQLG + S +P+ ++ + +AAG H+ A T G VY WG G H +
Sbjct: 153 GQLGVSAEKTHSAEPLLLKSFHE-PVTSVAAGLRHALASTASGCVYQWGTGLSSHAKRML 211
Query: 267 GDNDKSSKMVPQKVNLLAGEDIV---QVSCGGTHSVALTRDGHIFSFGRGDHGRL 318
S + ++ L+ G V +V G H LT +G +F +G HG+L
Sbjct: 212 NPQPVPSHLSSKEPCLVPGFAHVTTQKVIAGSAHCACLTVNGELFLWGSNKHGQL 266
Score = 183 (69.5 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 44/132 (33%), Positives = 69/132 (52%)
Query: 201 LWAWGNNEYGQLGTGDTQPRSQPIPVQ-GLSGLTLVDIAAGGWHSTALTDDGEVYGWGRG 259
L+ WG N YGQLG G+ + +++P V+ GL + + GG HS ++D GE+ G+
Sbjct: 39 LYTWGANSYGQLGQGNAEDQAEPRRVESGLQEEQIRAVTGGGGHSALISDSGELLVCGQN 98
Query: 260 EHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLG 319
G+LG G + M Q L + QVSCG ++ LT DG + + G G+LG
Sbjct: 99 HKGQLGLGHTLEI--MTFQTCPLPGFGRVQQVSCGWDFTIILTGDGLVLACGSNAFGQLG 156
Query: 320 YGRKVT-TGQPM 330
+ T + +P+
Sbjct: 157 VSAEKTHSAEPL 168
Score = 177 (67.4 bits), Expect = 5.8e-15, Sum P(2) = 5.8e-15
Identities = 56/198 (28%), Positives = 85/198 (42%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRI-LRRD 123
P V ++ + G HC + G + WG N++GQ +G + L
Sbjct: 225 PCLVPGFAHVTTQKVIAGSAHCACLTVNGELFLWGSNKHGQL--------ISGSLFLPLP 276
Query: 124 IVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQ-------------- 169
+ + + V V +G TH V T G V+TWG+ G + Q
Sbjct: 277 VALDRSMLQDERVSDVHSGWTHLVAQTESGRVFTWGRS-NYGQLGQTNHSMEKQSCDEHL 335
Query: 170 ISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGL 229
+ PV V+ L I+ G+ HNLA+ G +++WG NE+G G G Q +QP P+ L
Sbjct: 336 VRSPVEVKALFGATQISCGSEHNLAVV-GGRVFSWGWNEHGMCGDGSLQDITQPQPIPAL 394
Query: 230 SGLTLVDIAAGGWHSTAL 247
+ + I G HS AL
Sbjct: 395 ADAVALLIGCGAGHSMAL 412
Score = 80 (33.2 bits), Expect = 4.2e-24, Sum P(2) = 4.2e-24
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 7 IIAWGSGEDGQLGIGNNEER-EWVCVVKALEPYKVRSVVAGSRNSLAICDDGK 58
+ WG+ GQLG GN E++ E V L+ ++R+V G +S I D G+
Sbjct: 39 LYTWGANSYGQLGQGNAEDQAEPRRVESGLQEEQIRAVTGGGGHSALISDSGE 91
Score = 56 (24.8 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 19/53 (35%), Positives = 26/53 (49%)
Query: 7 IIAWGSGEDGQLGIG--NNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDG 57
++A GS GQLG+ E + + EP V SV AG R++LA G
Sbjct: 144 VLACGSNAFGQLGVSAEKTHSAEPLLLKSFHEP--VTSVAAGLRHALASTASG 194
>UNIPROTKB|G3V1B4 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471064 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 UniGene:Hs.32470
HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058 EMBL:AC124078
ProteinModelPortal:G3V1B4 SMR:G3V1B4 Ensembl:ENST00000525422
ArrayExpress:G3V1B4 Bgee:G3V1B4 Uniprot:G3V1B4
Length = 354
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 92/301 (30%), Positives = 136/301 (45%)
Query: 42 SVVAGSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIGGW-HCLAVDDQGRAYAWGG 100
++ A NS G + +P Q+N + V+ GG H V D G + G
Sbjct: 16 ALFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGL 75
Query: 101 NEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWT--- 157
N+ GQ G G P + ++QVA G +++LT G V +
Sbjct: 76 NKDGQLG--------LGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGS 127
Query: 158 --WGQPWPPGDIKQISVPVRVQ-GLEQVKLIAVGAFHNLALQEDGALWAWGNN--EYGQ- 211
+GQ P ++ VP ++ E+V IA G H +A G ++ WG G+
Sbjct: 128 NSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGRR 187
Query: 212 LGTGDTQP----RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFG 267
L G T P +P V GL + + AG HS +LTD GEVY WG +HG+L
Sbjct: 188 LCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLA-- 245
Query: 268 DNDKSSKMVPQKV--NLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVT 325
N+ + VPQK+ + E + + G TH VA T G +F++GR D+G+LG RK+
Sbjct: 246 -NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG--RKLE 302
Query: 326 T 326
T
Sbjct: 303 T 303
Score = 180 (68.4 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 54/187 (28%), Positives = 87/187 (46%)
Query: 182 VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGG 241
V+ I G H+ + + G L+ G N+ GQLG G T+ P + L G + +A G
Sbjct: 51 VRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCKSLFGCPIQQVACG- 109
Query: 242 WHSTA-LTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVA 300
W T LT++G+V G G+LG + +VPQ + L E +V ++ G H+VA
Sbjct: 110 WDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRC-VVPQAIELHK-EKVVCIAAGLRHAVA 167
Query: 301 LTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGR 360
T G +F +G G GR++ GQ + + P G++ A V G
Sbjct: 168 ATASGIVFQWGTG---LASCGRRLCPGQTLPLFFTAKEPSRV-TGLENSK-AMCVLAGSD 222
Query: 361 HTLAIVE 367
H+ ++ +
Sbjct: 223 HSASLTD 229
Score = 76 (31.8 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 3 STTSIIAWGSGEDGQLGIGNNEEREWVCVVKAL----EPYKVRSVVAGSRNSLAICDDG 57
+ ++ AWG+ GQLG+G+ E+ V + + L +P VR + G +S + D G
Sbjct: 13 AAAALFAWGANSYGQLGLGHKED---VLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGG 68
>UNIPROTKB|F1S9B1 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050709 "negative regulation of protein secretion"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0050709 GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:CU914672 EMBL:CU467662 EMBL:CU693468
Ensembl:ENSSSCT00000014607 OMA:VYQWGTG Uniprot:F1S9B1
Length = 338
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 98/322 (30%), Positives = 145/322 (45%)
Query: 42 SVVAGSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIGGW-HCLAVDDQGRAYAWGG 100
++ A NS G + +P Q++ V+ GG H V DQG + G
Sbjct: 16 ALFAWGANSYGQLGLGHKEDVLLPQQLSEFCKPGCVKRITGGGGHSAIVTDQGSLFVCGL 75
Query: 101 NEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKL--IVRQVAAGGTHSVVLTREGHVWT- 157
N+ GQ G G D++ C L ++QVA G +++LT+ G V +
Sbjct: 76 NKDGQLG--------LGHT--EDVLYFTLCKSLLGCPIQQVACGWDFTIILTKNGQVLSC 125
Query: 158 ----WGQPWPPGDIKQISVP--VRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNN--EY 209
+GQ P ++ VP + VQ E+V IA G H LA G ++ WG
Sbjct: 126 GSNSFGQLGVPHGPRRCVVPQAIEVQR-EKVVSIAAGLRHALAATASGLVFQWGTGLASS 184
Query: 210 GQ-LGTGDTQP----RSQPIPVQ-GLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGR 263
G+ L G T P +P V GL V + AG HS +LTD GE+Y WG +HG+
Sbjct: 185 GRRLCPGQTLPLFLTAKEPSKVTVGLENSQAVCVLAGSGHSASLTDAGELYVWGSNKHGQ 244
Query: 264 LGFGDNDKSSKMVPQKVNL--LAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYG 321
L + + +PQK+ E + V G TH VA T G +F++GR D+G+LG
Sbjct: 245 LA---SQAAFLPLPQKIEAHRFQNEKVAAVWSGWTHLVAQTETGKVFTWGRADYGQLGRT 301
Query: 322 RKVTTG-QPMEVPINIPAPRNA 342
+ G +P + ++P R A
Sbjct: 302 LESPEGWKPKKQASSLPCSRPA 323
Score = 177 (67.4 bits), Expect = 9.2e-15, Sum P(2) = 9.2e-15
Identities = 52/187 (27%), Positives = 87/187 (46%)
Query: 182 VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGG 241
VK I G H+ + + G+L+ G N+ GQLG G T+ + L G + +A G
Sbjct: 51 VKRITGGGGHSAIVTDQGSLFVCGLNKDGQLGLGHTEDVLYFTLCKSLLGCPIQQVACG- 109
Query: 242 WHSTA-LTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVA 300
W T LT +G+V G G+LG + +VPQ + + E +V ++ G H++A
Sbjct: 110 WDFTIILTKNGQVLSCGSNSFGQLGVPHGPRRC-VVPQAIEVQR-EKVVSIAAGLRHALA 167
Query: 301 LTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGR 360
T G +F +G G GR++ GQ + + + P G++ A V G
Sbjct: 168 ATASGLVFQWGTG---LASSGRRLCPGQTLPLFLTAKEPSKVTVGLENSQ-AVCVLAGSG 223
Query: 361 HTLAIVE 367
H+ ++ +
Sbjct: 224 HSASLTD 230
Score = 73 (30.8 bits), Expect = 9.2e-15, Sum P(2) = 9.2e-15
Identities = 18/57 (31%), Positives = 31/57 (54%)
Query: 5 TSIIAWGSGEDGQLGIGNNEEREWVCVVKAL----EPYKVRSVVAGSRNSLAICDDG 57
T++ AWG+ GQLG+G+ E+ V + + L +P V+ + G +S + D G
Sbjct: 15 TALFAWGANSYGQLGLGHKED---VLLPQQLSEFCKPGCVKRITGGGGHSAIVTDQG 68
>UNIPROTKB|Q96I51 [details] [associations]
symbol:WBSCR16 "Williams-Beuren syndrome chromosomal region
16 protein" species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 Orphanet:904 MIM:194050
EMBL:AF410455 EMBL:AL136804 EMBL:CH471292 EMBL:BC007823
EMBL:BC019008 IPI:IPI00305992 RefSeq:NP_110425.1 UniGene:Hs.723684
ProteinModelPortal:Q96I51 SMR:Q96I51 IntAct:Q96I51 STRING:Q96I51
PhosphoSite:Q96I51 DMDM:116242843 PaxDb:Q96I51 PeptideAtlas:Q96I51
PRIDE:Q96I51 DNASU:81554 Ensembl:ENST00000329959 GeneID:81554
KEGG:hsa:81554 UCSC:uc003ubr.3 CTD:81554 GeneCards:GC07M074456
HGNC:HGNC:14948 neXtProt:NX_Q96I51 PharmGKB:PA37941
HOGENOM:HOG000232125 HOVERGEN:HBG054246 InParanoid:Q96I51
OMA:MVTLAKS OrthoDB:EOG4F1X33 PhylomeDB:Q96I51 ChiTaRS:WBSCR16
GenomeRNAi:81554 NextBio:71806 ArrayExpress:Q96I51 Bgee:Q96I51
CleanEx:HS_WBSCR16 Genevestigator:Q96I51 GermOnline:ENSG00000174374
Uniprot:Q96I51
Length = 464
Score = 272 (100.8 bits), Expect = 9.6e-24, Sum P(2) = 9.6e-24
Identities = 98/294 (33%), Positives = 137/294 (46%)
Query: 74 TKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE---EPERKDDTGRILRRDIVIPQRC 130
T+++Q + G H L + D+ ++ G N YGQCG E E ++ R+ R Q
Sbjct: 174 TRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQ-- 231
Query: 131 APKLIVRQVAAGGTHSVVLTREGHVWT--WGQPWPPG--DIKQISVPVRVQG-LEQVKLI 185
V QVA G HS+ LT +G V++ WG G S P ++ G L V +I
Sbjct: 232 -----VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGDLAGVNVI 286
Query: 186 AVGAFHN--LALQEDGALWAWGNNEYGQLGTGDTQPRSQPIP-VQGLSGLTLVDIAA-GG 241
V + + LA+ DG L+ WGN+EY QL + T +P SG+ V AA GG
Sbjct: 287 QVATYGDCCLAVSADGGLFGWGNSEYLQLASV-TDSTQVNVPRCLHFSGVGKVRQAACGG 345
Query: 242 WHSTALTDDGEVYGWGRGEHGRLGFGDNDKSS---KMVPQKV-NLLAGEDIVQVS---CG 294
L +G V+ WG +G LG G N S +M+P + L +QVS CG
Sbjct: 346 TGCAVLNGEGHVFVWG---YGILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCG 402
Query: 295 GTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPA-PRNAGDGVD 347
+H ALT G +F +G+ G LG GR P V +P P + GVD
Sbjct: 403 LSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRV--TMPGEPVDVACGVD 454
Score = 224 (83.9 bits), Expect = 4.5e-16, P = 4.5e-16
Identities = 88/279 (31%), Positives = 132/279 (47%)
Query: 75 KIVQAAIG-GWHCLAVDDQGRAYAWG-G-NEYGQCGEEPERKDDT-GR--ILRRDIV-IP 127
KI AA G G+ L+ WG G N+ Q G RKD T G +L V +P
Sbjct: 108 KISSAACGYGFTLLSSKTADVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSLP 167
Query: 128 QRCAPKLIVRQVAAGGTHSVVLT-REGHVWTWG--------QPWPPGDIKQISVPV-RVQ 177
+ V QV+ G HS+VLT REG V++ G + +I S V R+Q
Sbjct: 168 LDRPQETRVLQVSCGRAHSLVLTDREG-VFSMGNNSYGQCGRKVVENEIYSESHRVHRMQ 226
Query: 178 GLE-QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQG-LSGLTLV 235
+ QV +A G H+L L + G +++ G GQ G G S P + G L+G+ ++
Sbjct: 227 DFDGQVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGDLAGVNVI 286
Query: 236 DIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGG 295
+A G A++ DG ++GWG E+ +L D + VP+ ++ + Q +CGG
Sbjct: 287 QVATYGDCCLAVSADGGLFGWGNSEYLQLA-SVTDSTQVNVPRCLHFSGVGKVRQAACGG 345
Query: 296 THSVALTRDGHIFSFGRGDHGRLGYGRK-VTTGQPMEVP 333
T L +GH+F +G +G LG G V + P +P
Sbjct: 346 TGCAVLNGEGHVFVWG---YGILGKGPNLVESAVPEMIP 381
Score = 172 (65.6 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 73/246 (29%), Positives = 108/246 (43%)
Query: 75 KIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKL 134
++VQ A G H L + D+G Y+ G GQ G + L D+ +
Sbjct: 231 QVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGDLA-------GV 283
Query: 135 IVRQVAAGGTHSVVLTREGHVWTWG-----QPWPPGDIKQISVP--VRVQGLEQVKLIAV 187
V QVA G + ++ +G ++ WG Q D Q++VP + G+ +V+ A
Sbjct: 284 NVIQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLHFSGVGKVRQAAC 343
Query: 188 GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS---QPIPVQGLSGLTLVD-------I 237
G L +G ++ WG YG LG G S + IP L GLT + I
Sbjct: 344 GGTGCAVLNGEGHVFVWG---YGILGKGPNLVESAVPEMIPPT-LFGLTEFNPEIQVSRI 399
Query: 238 AAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTH 297
G H ALT+ GE++ WG+ G LG G + + P +V + GE V V+CG H
Sbjct: 400 RCGLSHFAALTNKGELFVWGKNIRGCLGIGRLE--DQYFPWRVTM-PGEP-VDVACGVDH 455
Query: 298 SVALTR 303
V L +
Sbjct: 456 MVTLAK 461
Score = 164 (62.8 bits), Expect = 7.9e-09, Sum P(2) = 7.9e-09
Identities = 65/199 (32%), Positives = 87/199 (43%)
Query: 65 PSQVNA-LSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRD 123
P+++ L+ ++Q A G CLAV G + WG +EY Q D T
Sbjct: 273 PTKLGGDLAGVNVIQVATYGDCCLAVSADGGLFGWGNSEYLQLASVT---DST------Q 323
Query: 124 IVIPQRC---APKLIVRQVAAGGTHSVVLTREGHVWTWGQP-WPPG-DIKQISVPVRVQ- 177
+ +P RC + VRQ A GGT VL EGHV+ WG G ++ + +VP +
Sbjct: 324 VNVP-RCLHFSGVGKVRQAACGGTGCAVLNGEGHVFVWGYGILGKGPNLVESAVPEMIPP 382
Query: 178 ---GLE------QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQG 228
GL QV I G H AL G L+ WG N G LG G + + P V
Sbjct: 383 TLFGLTEFNPEIQVSRIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVT- 441
Query: 229 LSGLTLVDIAAGGWHSTAL 247
+ G VD+A G H L
Sbjct: 442 MPGEP-VDVACGVDHMVTL 459
Score = 37 (18.1 bits), Expect = 9.6e-24, Sum P(2) = 9.6e-24
Identities = 11/39 (28%), Positives = 16/39 (41%)
Query: 2 ASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKV 40
A T + G +D QLG + + + LEP V
Sbjct: 126 ADVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPV 164
>TAIR|locus:2144291 [details] [associations]
symbol:AT5G11580 "AT5G11580" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 HSSP:P18754 EMBL:AY058861 EMBL:AY079040
IPI:IPI00537184 RefSeq:NP_568250.1 UniGene:At.5137 UniGene:At.75215
ProteinModelPortal:Q93Z10 SMR:Q93Z10 PRIDE:Q93Z10
EnsemblPlants:AT5G11580.1 GeneID:831030 KEGG:ath:AT5G11580
TAIR:At5g11580 InParanoid:Q93Z10 OMA:WTFGLGD PhylomeDB:Q93Z10
ProtClustDB:CLSN2689608 Genevestigator:Q93Z10 Uniprot:Q93Z10
Length = 553
Score = 220 (82.5 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 66/197 (33%), Positives = 99/197 (50%)
Query: 182 VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGL---SGLTLVDIA 238
V L+ G H + L++WGNN +GQLG GD + R++P V+ SGLT+ DIA
Sbjct: 210 VALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQTVETFNQKSGLTVYDIA 269
Query: 239 AGGWHSTALT-----DDGEVYGW--GRGEHGRLGFGDNDKSSKMVPQKVNLLAGED-IVQ 290
G H+ LT G W G GE+G+LG N SS +P+ V+ L +V
Sbjct: 270 CGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRSNKSSS--LPEPVSDLPEHAYLVS 327
Query: 291 VSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRW 350
V CG H+ ++ +G+++S+G + G LG V + +E + PR G R
Sbjct: 328 VDCGLFHTSVVSSEGYVWSWGM-ERG-LGLCPDVNFTE-VEAGDD-SVPRKISGGSSRFR 383
Query: 351 IAKLVACGGRHTLAIVE 367
V+CG HT+ +V+
Sbjct: 384 DPVQVSCGAAHTVLVVD 400
Score = 190 (71.9 bits), Expect = 9.0e-12, Sum P(2) = 9.0e-12
Identities = 58/195 (29%), Positives = 88/195 (45%)
Query: 185 IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQ---GLSG--LTLVDIAA 239
+A G H +AL DG +++WG +G+LGTG P+ V+ G + +V +AA
Sbjct: 21 LAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDRIRIVGVAA 80
Query: 240 GGWHSTALTDDGEVYGWGRGEHGRLGF-GDNDKSSKMVPQKVNLLAGEDIVQVS---CGG 295
G +HS A++DDG V+ WG +G+LGF G+N + ++ + S G
Sbjct: 81 GAYHSLAVSDDGSVWCWGYNIYGQLGFDGENSLAPCLIKNLFERETSSSSLNDSGREVGS 140
Query: 296 THSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVP----INIPAPRNAGDGVDRRWI 351
V + G + S + G L V P +IP P D R +
Sbjct: 141 DLKVCTVKAGSMMSLAIDNVGGLWMWGNVPPQDSEPDPRLSFTSIPIPFPILD-FHGRTV 199
Query: 352 AKLVACGGRHTLAIV 366
K VACG H +A+V
Sbjct: 200 LK-VACGDEHVVALV 213
Score = 167 (63.8 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 51/153 (33%), Positives = 76/153 (49%)
Query: 185 IAVGAFHNLAL---QED----GALWAWGNNEYGQLGTGDTQPRSQPIPVQGL-SGLTLVD 236
IA GA H L +E W +G E GQLG + S P PV L LV
Sbjct: 268 IACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRSNKSSSLPEPVSDLPEHAYLVS 327
Query: 237 IAAGGWHSTALTDDGEVYGWGRGEHGR-----LGFGDNDKSSKMVPQKVNLLAGE--DIV 289
+ G +H++ ++ +G V+ WG E G + F + + VP+K++ + D V
Sbjct: 328 VDCGLFHTSVVSSEGYVWSWGM-ERGLGLCPDVNFTEVEAGDDSVPRKISGGSSRFRDPV 386
Query: 290 QVSCGGTHSVALTRDGH-IFSFGRGDHGRLGYG 321
QVSCG H+V + G+ ++S+GRG +G LG G
Sbjct: 387 QVSCGAAHTVLVVDGGYKLWSWGRGRNGVLGTG 419
Score = 166 (63.5 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 39/92 (42%), Positives = 57/92 (61%)
Query: 234 LVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV---NLLAGEDI-- 288
++ +AAG H+ ALT DG VY WGRG GRLG G +S ++VP V N G+ I
Sbjct: 18 IISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGK--ESDELVPVLVEFPNQAEGDRIRI 75
Query: 289 VQVSCGGTHSVALTRDGHIFSFGRGDHGRLGY 320
V V+ G HS+A++ DG ++ +G +G+LG+
Sbjct: 76 VGVAAGAYHSLAVSDDGSVWCWGYNIYGQLGF 107
Score = 160 (61.4 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 53/205 (25%), Positives = 81/205 (39%)
Query: 181 QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ------PIPVQGLSGLTL 234
+V + G+ +LA+ G LW WGN + PR P P+ G T+
Sbjct: 143 KVCTVKAGSMMSLAIDNVGGLWMWGNVPPQD---SEPDPRLSFTSIPIPFPILDFHGRTV 199
Query: 235 VDIAAGGWHSTALTDDGEV-----------YGWGRGEHGRLGFGDNDKSSKMVPQKV--- 280
+ +A G H AL G++ Y WG HG+LG GD + ++ PQ V
Sbjct: 200 LKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRAR--PQTVETF 257
Query: 281 NLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPR 340
N +G + ++CG H+ LT G G+G G ++P P
Sbjct: 258 NQKSGLTVYDIACGAHHTALLTYRKETPK-GPSICWTFGFGENGQLGHRSNKSSSLPEP- 315
Query: 341 NAGDGVDRRWIAKLVACGGRHTLAI 365
D + ++ V CG HT +
Sbjct: 316 -VSDLPEHAYLVS-VDCGLFHTSVV 338
Score = 150 (57.9 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 36/101 (35%), Positives = 59/101 (58%)
Query: 124 IVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPW----PPGDIKQISVPVRVQGL 179
++I + + K+I +AAG H++ LT +G V++WG+ G VPV V+
Sbjct: 8 LLISEDLSRKII--SLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFP 65
Query: 180 EQ-----VKLIAV--GAFHNLALQEDGALWAWGNNEYGQLG 213
Q ++++ V GA+H+LA+ +DG++W WG N YGQLG
Sbjct: 66 NQAEGDRIRIVGVAAGAYHSLAVSDDGSVWCWGYNIYGQLG 106
Score = 123 (48.4 bits), Expect = 0.00016, P = 0.00016
Identities = 36/95 (37%), Positives = 52/95 (54%)
Query: 275 MVPQKVNLLAGED----IVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPM 330
M + LL ED I+ ++ G H++ALT DG ++S+GRG GRLG G++
Sbjct: 1 MEDKSPTLLISEDLSRKIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKE----SDE 56
Query: 331 EVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
VP+ + P N +G DR I VA G H+LA+
Sbjct: 57 LVPVLVEFP-NQAEG-DRIRIVG-VAAGAYHSLAV 88
Score = 119 (46.9 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 27/86 (31%), Positives = 44/86 (51%)
Query: 75 KIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRC-APK 133
KI+ A G H +A+ G Y+WG +G+ G E D+ +L + P + +
Sbjct: 17 KIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKE-SDELVPVL---VEFPNQAEGDR 72
Query: 134 LIVRQVAAGGTHSVVLTREGHVWTWG 159
+ + VAAG HS+ ++ +G VW WG
Sbjct: 73 IRIVGVAAGAYHSLAVSDDGSVWCWG 98
Score = 110 (43.8 bits), Expect = 3.2e-23, Sum P(3) = 3.2e-23
Identities = 34/111 (30%), Positives = 45/111 (40%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDT---GRILR 121
P+Q +IV A G +H LAV D G + WG N YGQ G + E +
Sbjct: 65 PNQAEG-DRIRIVGVAAGAYHSLAVSDDGSVWCWGYNIYGQLGFDGENSLAPCLIKNLFE 123
Query: 122 RDIVIP------QRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGD 166
R+ + L V V AG S+ + G +W WG PP D
Sbjct: 124 RETSSSSLNDSGREVGSDLKVCTVKAGSMMSLAIDNVGGLWMWGNV-PPQD 173
Score = 110 (43.8 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 34/116 (29%), Positives = 54/116 (46%)
Query: 168 KQISVPVRVQGL-EQVKLIAV--GAFHNLALQEDGALWAWGNNE---------YGQLGTG 215
K S+P V L E L++V G FH + +G +W+WG + ++ G
Sbjct: 308 KSSSLPEPVSDLPEHAYLVSVDCGLFHTSVVSSEGYVWSWGMERGLGLCPDVNFTEVEAG 367
Query: 216 DTQPRSQPIPVQGLSGLTL--VDIAAGGWHSTALTDDG-EVYGWGRGEHGRLGFGD 268
D S P + G S V ++ G H+ + D G +++ WGRG +G LG G+
Sbjct: 368 DD---SVPRKISGGSSRFRDPVQVSCGAAHTVLVVDGGYKLWSWGRGRNGVLGTGN 420
Score = 109 (43.4 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 47/186 (25%), Positives = 76/186 (40%)
Query: 56 DGKTKTENIPSQV---NALSNTKIVQAAIGGWHCLAVD-----DQGRAYAW--GGNEYGQ 105
DG+++ P V N S + A G H + +G + W G E GQ
Sbjct: 244 DGESRAR--PQTVETFNQKSGLTVYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQ 301
Query: 106 CGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP---- 161
G + + D+ P+ L+ V G H+ V++ EG+VW+WG
Sbjct: 302 LGHRSNKSSSLPEPVS-DL--PEHAY--LV--SVDCGLFHTSVVSSEGYVWSWGMERGLG 354
Query: 162 -WPPGDIKQI-----SVPVRVQG----LEQVKLIAVGAFHNLALQEDG-ALWAWGNNEYG 210
P + ++ SVP ++ G ++ GA H + + + G LW+WG G
Sbjct: 355 LCPDVNFTEVEAGDDSVPRKISGGSSRFRDPVQVSCGAAHTVLVVDGGYKLWSWGRGRNG 414
Query: 211 QLGTGD 216
LGTG+
Sbjct: 415 VLGTGN 420
Score = 73 (30.8 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVV----KALEPYKVR--SVVAGSRNSLAICDDG 57
+ +WG G G+LG G E E V V+ E ++R V AG+ +SLA+ DDG
Sbjct: 37 VYSWGRGMFGRLGTGK-ESDELVPVLVEFPNQAEGDRIRIVGVAAGAYHSLAVSDDG 92
Score = 59 (25.8 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 7 IIAWGSGEDGQLGIGNNEER 26
+ +WG+ GQLG+G+ E R
Sbjct: 229 LYSWGNNHHGQLGLGDGESR 248
Score = 42 (19.8 bits), Expect = 1.9e-16, Sum P(3) = 1.9e-16
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKAL 35
S+ WG GQLG + E C++K L
Sbjct: 93 SVWCWGYNIYGQLGF-DGENSLAPCLIKNL 121
Score = 41 (19.5 bits), Expect = 1.9e-16, Sum P(3) = 1.9e-16
Identities = 14/30 (46%), Positives = 17/30 (56%)
Query: 39 KVRSVVAGSRNSLAICD-DGKTKTENIPSQ 67
KV +V AGS SLAI + G N+P Q
Sbjct: 143 KVCTVKAGSMMSLAIDNVGGLWMWGNVPPQ 172
Score = 39 (18.8 bits), Expect = 3.2e-23, Sum P(3) = 3.2e-23
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 39 KVRSVVAGSRNSLAICDDG 57
K+ S+ AG +++A+ DG
Sbjct: 17 KIISLAAGEAHTIALTGDG 35
>TAIR|locus:2086253 [details] [associations]
symbol:AT3G23270 "AT3G23270" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 PROSITE:PS50003
SMART:SM00064 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005938 EMBL:CP002686 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
IPI:IPI00516271 RefSeq:NP_188968.1 UniGene:At.53452
ProteinModelPortal:F4J2Y2 SMR:F4J2Y2 PRIDE:F4J2Y2
EnsemblPlants:AT3G23270.1 GeneID:821906 KEGG:ath:AT3G23270
OMA:PKFRAFR ArrayExpress:F4J2Y2 Uniprot:F4J2Y2
Length = 1045
Score = 282 (104.3 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 98/346 (28%), Positives = 162/346 (46%)
Query: 53 ICDDGKTKTENIPSQV---NALSNTKIV---QAAIGGWHCLAVDDQGRAYAWGGNEYGQC 106
I DG E + + V L + ++ Q G H V QG + WG G+
Sbjct: 224 ILPDGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRL 283
Query: 107 GEEPERKDDTGRILRRDIVIPQRCAPKLI--VRQVAAGGTHSVVLTREGHVWTWGQPWPP 164
G G ++ DI P+ + + VA G H+ V++ G +++WG
Sbjct: 284 GH--------G--IQVDISRPKLVEFLALTNIDFVACGEYHTCVVSTSGDLFSWGDGIHN 333
Query: 165 ----GDIKQIS--VPVRVQG-LE--QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTG 215
G IS +P RV G LE QV +A G +H+ +G L+ +G+ +G LG G
Sbjct: 334 VGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHG 393
Query: 216 DTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTD----------DGEVYGWGRGEHGRLG 265
+ + S P VQ L+GL V +A WH+ A+ + +++ WG G+ RLG
Sbjct: 394 NRESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLG 453
Query: 266 FGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVT 325
G+ K + ++P V+ L + +++CG T +VALT GH+F+ G HG+LG ++
Sbjct: 454 HGN--KETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLG--NSIS 509
Query: 326 TGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVEWQTE 371
G+ +P + R G+ V+ +ACG H +A++ ++E
Sbjct: 510 DGK---LPCLVQ-DRLVGEFVEE------IACGAHH-VAVLTSRSE 544
Score = 243 (90.6 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 92/323 (28%), Positives = 138/323 (42%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P V L+ T I A G +H V G ++WG + G D + I +R +
Sbjct: 294 PKLVEFLALTNIDFVACGEYHTCVVSTSGDLFSWGDGIHN-VGLLGHGSDISHWIPKR-V 351
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----WPPGDIKQISVPVRVQGLE 180
P L V VA G HS + T G ++T+G G+ + +S P VQ L
Sbjct: 352 SGPLE---GLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLN 408
Query: 181 QVKLIAVGA--FHNLALQE----------DGALWAWGNNEYGQLGTGDTQPRSQPIPVQG 228
+K + V +H A+ E L+ WG+ + +LG G+ + P V
Sbjct: 409 GLKTVKVACSIWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSS 468
Query: 229 LSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV-NLLAGED 287
L IA G + ALT G V+ G HG+LG N S +P V + L GE
Sbjct: 469 LIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLG---NSISDGKLPCLVQDRLVGEF 525
Query: 288 IVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVD 347
+ +++CG H LT +F++G+G +GRLG+G + P + A R D
Sbjct: 526 VEEIACGAHHVAVLTSRSEVFTWGKGANGRLGHGDT----EDKRTPTLVEALR------D 575
Query: 348 RRWIAKLVACGGRHT--LAIVEW 368
R K ++CG T + I +W
Sbjct: 576 RH--VKSLSCGSNFTSSICIHKW 596
Score = 242 (90.2 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 66/224 (29%), Positives = 108/224 (48%)
Query: 89 VDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLI--VRQVAAGGTHS 146
++ G Y WG E G P+ + ++ D++ P+ ++ V Q+ G H
Sbjct: 207 IESLGDVYVWG--EVWTEGILPDGTA-SNETVKTDVLTPRPLESNVVLDVHQIVCGVRHV 263
Query: 147 VVLTREGHVWTWGQP----WPPGDIKQISVPVRVQ--GLEQVKLIAVGAFHNLALQEDGA 200
++TR+G V+TWG+ G IS P V+ L + +A G +H + G
Sbjct: 264 ALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACGEYHTCVVSTSGD 323
Query: 201 LWAWGN--NEYGQLGTGDTQPRSQPIPVQG-LSGLTLVDIAAGGWHSTALTDDGEVYGWG 257
L++WG+ + G LG G P V G L GL ++ +A G WHS T +G+++ +G
Sbjct: 324 LFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHSALATANGKLFTFG 383
Query: 258 RGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVAL 301
G G LG G+ + S P++V L G V+V+C H+ A+
Sbjct: 384 DGAFGVLGHGNRESVS--YPKEVQSLNGLKTVKVACSIWHTAAI 425
Score = 237 (88.5 bits), Expect = 6.4e-17, P = 6.4e-17
Identities = 77/245 (31%), Positives = 118/245 (48%)
Query: 140 AAGGTHSVVLTREGHVWTWGQPW-----PPGDIKQISVPVRV---QGLEQ-----VKLIA 186
++GG+ + G V+ WG+ W P G +V V + LE V I
Sbjct: 198 SSGGSGPDDIESLGDVYVWGEVWTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQIV 257
Query: 187 VGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVD-IAAGGWHST 245
G H + G ++ WG G+LG G S+P V+ L+ LT +D +A G +H+
Sbjct: 258 CGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLA-LTNIDFVACGEYHTC 316
Query: 246 ALTDDGEVYGWGRGEH--GRLGFGDNDKSSKMVPQKVN-LLAGEDIVQVSCGGTHSVALT 302
++ G+++ WG G H G LG G + S +P++V+ L G ++ V+CG HS T
Sbjct: 317 VVSTSGDLFSWGDGIHNVGLLGHGSD--ISHWIPKRVSGPLEGLQVLSVACGTWHSALAT 374
Query: 303 RDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHT 362
+G +F+FG G G LG+G + + P EV + +G+ K VAC HT
Sbjct: 375 ANGKLFTFGDGAFGVLGHGNRESVSYPKEV--------QSLNGLKT---VK-VACSIWHT 422
Query: 363 LAIVE 367
AIVE
Sbjct: 423 AAIVE 427
Score = 191 (72.3 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 75/291 (25%), Positives = 119/291 (40%)
Query: 49 NSLAICDDGKTKTENIPSQVNA-LSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 107
+++ + G + IP +V+ L +++ A G WH G+ + +G +G G
Sbjct: 332 HNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLG 391
Query: 108 E---EPERKDDTGRILRRDIVIPQRCAPKLIVRQVAA-GGTHSVVLTREGHVWTWGQP-- 161
E + L + C+ V G T + + +R+ ++TWG
Sbjct: 392 HGNRESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTATSMSSRK--LFTWGDGDK 449
Query: 162 --WPPGDIKQISVPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDT 217
G+ + +P V L IA G +AL G ++ G +GQLG +
Sbjct: 450 NRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLGNSIS 509
Query: 218 QPRSQPIPVQG-LSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMV 276
+ P VQ L G + +IA G H LT EV+ WG+G +GRLG GD + K
Sbjct: 510 DGKL-PCLVQDRLVGEFVEEIACGAHHVAVLTSRSEVFTWGKGANGRLGHGDTE--DKRT 566
Query: 277 PQKVNLLAGEDIVQVSCGG--THSVALTR--DGHIFSFGRGDHGRLGYGRK 323
P V L + +SCG T S+ + + G S G G+ RK
Sbjct: 567 PTLVEALRDRHVKSLSCGSNFTSSICIHKWVSGADQSICSGCRQAFGFTRK 617
Score = 38 (18.4 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 11/51 (21%), Positives = 20/51 (39%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDG 57
+ WG G+LG G + +V+ L + V G ++ + G
Sbjct: 272 VFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACGEYHTCVVSTSG 322
>POMBASE|SPBC557.03c [details] [associations]
symbol:pim1 "Ran GDP/GTP exchange factor" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005087 "Ran guanyl-nucleotide exchange factor
activity" evidence=IGI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006406 "mRNA export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=ISO] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IMP] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IC] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IMP] [GO:0030071 "regulation of
mitotic metaphase/anaphase transition" evidence=IMP] [GO:0031291
"Ran protein signal transduction" evidence=IGI] [GO:0032888
"regulation of mitotic spindle elongation" evidence=IMP]
[GO:0042992 "negative regulation of transcription factor import
into nucleus" evidence=IMP] [GO:0060623 "regulation of chromosome
condensation" evidence=IGI] [GO:1901673 "regulation of spindle
assembly involved in mitosis" evidence=IMP] PomBase:SPBC557.03c
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0051301 GO:GO:0030071
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0006406
GO:GO:0090307 GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0007093 eggNOG:COG5184
GO:GO:0060623 GO:GO:0042992 GO:GO:0006407 GO:GO:0031291 EMBL:M73528
PIR:B40039 PIR:T50368 RefSeq:NP_596026.1 ProteinModelPortal:P28745
STRING:P28745 EnsemblFungi:SPBC557.03c.1 GeneID:2541059
KEGG:spo:SPBC557.03c HOGENOM:HOG000170207 OMA:KGIVYAW
OrthoDB:EOG466ZVF NextBio:20802173 Uniprot:P28745
Length = 539
Score = 276 (102.2 bits), Expect = 2.1e-23, P = 2.1e-23
Identities = 82/294 (27%), Positives = 136/294 (46%)
Query: 45 AGSRNSLAICDDGKTKTENIPSQVNALSNTKI--VQAAIGGWHCLAVDDQGRAYAWGGNE 102
+GS N L + ++ P LS K+ V A+GG H A+ GR Y WG N+
Sbjct: 78 SGSMNELGMGEEEMDVVYR-PRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYTWGVND 136
Query: 103 YGQCGE-EPERKDDTGRILRRDIV--IPQR---CAPKLIVRQVAAGGTHSVVLTREGHVW 156
G ++KD+ G + D++ P + L V +V + +T G +
Sbjct: 137 DYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAITDNGCCF 196
Query: 157 TWGQ-PWPPGDI------KQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEY 209
TWG G + K+ + P +++ L ++ +A G H +AL G ++ WGN +
Sbjct: 197 TWGTFRCSDGVLGYSDSQKRTAEPTQMR-LPEICQLATGTDHIIALTTTGKVYTWGNGQQ 255
Query: 210 GQLGTGDTQPRS-QPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGD 268
QLG + R Q + Q L+ ++ + AG +HS A+ + G VY WG + G
Sbjct: 256 FQLGRRMLERRRLQGLTPQPLALKNIISVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEV 315
Query: 269 NDKSSKMV---PQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLG 319
D+ V P V+ L G ++ ++ G H++AL DG + ++GR D +LG
Sbjct: 316 EDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLG 369
Score = 263 (97.6 bits), Expect = 9.1e-23, Sum P(2) = 9.1e-23
Identities = 85/311 (27%), Positives = 141/311 (45%)
Query: 76 IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE-EPERKDDTGRILRRDIV--IPQR--- 129
+V A+GG H A+ GR Y WG N+ G ++KD+ G + D++ P +
Sbjct: 110 VVDLAVGGMHSAALSHDGRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEG 169
Query: 130 CAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ-PWPPGDI------KQISVPVRVQGLEQV 182
L V +V + +T G +TWG G + K+ + P +++ L ++
Sbjct: 170 ALSHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYSDSQKRTAEPTQMR-LPEI 228
Query: 183 KLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS-QPIPVQGLSGLTLVDIAAGG 241
+A G H +AL G ++ WGN + QLG + R Q + Q L+ ++ + AG
Sbjct: 229 CQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPLALKNIISVGAGS 288
Query: 242 WHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMV---PQKVNLLAGEDIVQVSCGGTHS 298
+HS A+ + G VY WG + G D+ V P V+ L G ++ ++ G H+
Sbjct: 289 YHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHT 348
Query: 299 VALTRDGHIFSFGRGDHGRLGYGRKVT--TGQPMEVPIN--IPAPRNAGDGVDRRWIAKL 354
+AL DG + ++GR D +LG T E N + P G+ + ++
Sbjct: 349 LALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTII-PGLTN--VIQV 405
Query: 355 VACGGRHTLAI 365
V CG H LA+
Sbjct: 406 V-CGTHHNLAV 415
Score = 215 (80.7 bits), Expect = 3.7e-16, Sum P(2) = 3.7e-16
Identities = 74/279 (26%), Positives = 121/279 (43%)
Query: 62 ENIPSQVN-ALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEY--GQCGEEPERKDDTGR 118
E PS+V ALS+ ++ + A+ D G + WG G G +K
Sbjct: 161 EGTPSKVEGALSHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYSDSQKRTAEP 220
Query: 119 ILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLT-REGHVWTWGQPWPPGDIKQISVPVRVQ 177
R +P+ C + A T V T G + G+ Q P +
Sbjct: 221 TQMR---LPEICQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPL- 276
Query: 178 GLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLG--TGDTQPRS---QPIPVQGLSGL 232
L+ + + G++H+ A+ G ++AWG N Q G D + + +P V L G
Sbjct: 277 ALKNIISVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGY 336
Query: 233 TLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVP-QKVN--------LL 283
+ I G H+ AL +DG V WGR + +LG DN +V +K N ++
Sbjct: 337 NVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTII 396
Query: 284 AG-EDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYG 321
G +++QV CG H++A+T DG ++S+G ++ +G G
Sbjct: 397 PGLTNVIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQG 435
Score = 199 (75.1 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 82/296 (27%), Positives = 131/296 (44%)
Query: 96 YAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHV 155
Y +G + G E D ++ R + P K+ V +A GG HS L+ +G V
Sbjct: 74 YVFGSGSMNELGMGEEEMD----VVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRV 129
Query: 156 WTWG--QPWPPG----DIKQIS-----------VPVRVQG-LEQVKLIAVGAFHNL--AL 195
+TWG + G D K + P +V+G L +++ V NL A+
Sbjct: 130 YTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAI 189
Query: 196 QEDGALWAWGNNEY--GQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEV 253
++G + WG G LG D+Q R+ P Q + + +A G H ALT G+V
Sbjct: 190 TDNGCCFTWGTFRCSDGVLGYSDSQKRTAE-PTQ-MRLPEICQLATGTDHIIALTTTGKV 247
Query: 254 YGWGRGEHGRLG--FGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFG 311
Y WG G+ +LG + + + PQ LA ++I+ V G HS A+ G ++++G
Sbjct: 248 YTWGNGQQFQLGRRMLERRRLQGLTPQP---LALKNIISVGAGSYHSFAIDNKGRVYAWG 304
Query: 312 RGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
+ G +V + V I P +A +G + K + G HTLA++E
Sbjct: 305 LNITRQCGI--EVEDEEEGAV-ITKPTLVDALEGYN----VKSITGGEHHTLALLE 353
Score = 198 (74.8 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 51/177 (28%), Positives = 85/177 (48%)
Query: 58 KTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTG 117
+ + + + Q AL N I+ G +H A+D++GR YAWG N QCG E E +++ G
Sbjct: 265 RRRLQGLTPQPLALKN--IISVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEE-G 321
Query: 118 RILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ--------P---WPPGD 166
++ + ++ V+ + G H++ L +G V WG+ P P
Sbjct: 322 AVITKPTLVD--ALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETV 379
Query: 167 IKQ-------ISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGD 216
+K +S P + GL V + G HNLA+ DG +++WG+ E ++G GD
Sbjct: 380 VKDEKGNNYYLSTPTIIPGLTNVIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGD 436
Score = 177 (67.4 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 54/146 (36%), Positives = 76/146 (52%)
Query: 170 ISVPVRVQGLE--QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQ-PRSQPIPV 226
I+ P V LE VK I G H LAL EDG + AWG ++ QLG D P +
Sbjct: 324 ITKPTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDE 383
Query: 227 QG----LS------GLT-LVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKM 275
+G LS GLT ++ + G H+ A+T DG+VY WG E+ +G GDND+
Sbjct: 384 KGNNYYLSTPTIIPGLTNVIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDVA- 442
Query: 276 VPQKVNLLAGEDI-VQVS-CGGTHSV 299
VP V A +++ ++V+ GG S+
Sbjct: 443 VPTLVRSKAIKEVAIRVAGAGGQFSI 468
Score = 143 (55.4 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 58/222 (26%), Positives = 94/222 (42%)
Query: 160 QPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQP 219
+P + + PVRV G + + L + ++ +G+ +LG G+ +
Sbjct: 37 KPVKRAKVSSLPKPVRVPGSAK----RINKIPELPTERLN-VYVFGSGSMNELGMGEEEM 91
Query: 220 ----RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEH---GRLGFGDNDKS 272
R + P+ + +VD+A GG HS AL+ DG VY WG + GRL D++
Sbjct: 92 DVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYTWGVNDDYALGRLTKDQKDEN 151
Query: 273 SKMV--------PQKVN-LLAGEDIVQVSCGGTHSVALTRDGHIFSFG--RGDHGRLGYG 321
V P KV L+ + +V C + A+T +G F++G R G LGY
Sbjct: 152 GDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYS 211
Query: 322 -RKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHT 362
+ T +P ++ +P G D I L G +T
Sbjct: 212 DSQKRTAEPTQM--RLPEICQLATGTDH--IIALTTTGKVYT 249
Score = 88 (36.0 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVK-----ALEPYKVRSVVAGSRNSLAICDDGK 58
+ AWG Q GI +E E + K ALE Y V+S+ G ++LA+ +DG+
Sbjct: 300 VYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLEDGR 356
Score = 88 (36.0 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 24/84 (28%), Positives = 39/84 (46%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P+ + L+N ++Q G H LAV G+ Y+WG E + G+ +D L R
Sbjct: 393 PTIIPGLTN--VIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDVAVPTLVRSK 450
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVV 148
I + + +R AGG S++
Sbjct: 451 AIKE-----VAIRVAGAGGQFSII 469
Score = 52 (23.4 bits), Expect = 9.1e-23, Sum P(2) = 9.1e-23
Identities = 15/60 (25%), Positives = 28/60 (46%)
Query: 6 SIIAWGSGEDGQLGIGNNEE----REWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKT 61
++ +GSG +LG+G E R + + + + V + G +S A+ DG+ T
Sbjct: 72 NVYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYT 131
Score = 42 (19.8 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 19/64 (29%), Positives = 29/64 (45%)
Query: 7 IIAWGSGEDGQLG-IGNNEEREWVCVVK--ALE--PYKVRSVVAGSRNSLAICDDGKTK- 60
+ WG +D LG + +++ E V LE P KV ++ R + IC D T
Sbjct: 129 VYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAA 188
Query: 61 -TEN 63
T+N
Sbjct: 189 ITDN 192
>RGD|1307558 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region 16"
species:10116 "Rattus norvegicus" [GO:0005739 "mitochondrion"
evidence=IEA;ISO] RGD:1307558 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:CH473973 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
OrthoDB:EOG4F1X33 IPI:IPI00189798 RefSeq:NP_001101802.1
UniGene:Rn.40552 Ensembl:ENSRNOT00000002032 GeneID:360796
KEGG:rno:360796 UCSC:RGD:1307558 NextBio:674123 Uniprot:D4AE90
Length = 461
Score = 274 (101.5 bits), Expect = 3.6e-23, P = 3.6e-23
Identities = 94/307 (30%), Positives = 143/307 (46%)
Query: 64 IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE---EPERKDDTGRIL 120
+P ++ TK++Q + G H L + D+ ++ G N +GQCG E E ++ ++
Sbjct: 161 VPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNAHGQCGRKVVEDEVYSESHKVH 220
Query: 121 RRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWT--WGQPWPPG--DIKQISVPVRV 176
R Q V QV G HS+ LT +G V++ WG G S P ++
Sbjct: 221 RMQDFEGQ-------VVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKL 273
Query: 177 QG-LEQVKLIAVGAFHN--LALQEDGALWAWGNNEYGQLG--TGDTQ---PRSQPIPVQG 228
G L V ++ V + + LAL DG ++ WGN+EY QL T TQ PR +P G
Sbjct: 274 GGDLAGVTVVQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRC--LPFSG 331
Query: 229 LSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSS---KMVPQKVNLLAG 285
+ + +A GG L ++G V+ WG +G LG G N + +M+P + L
Sbjct: 332 VGKVK--QVACGGTGCAILNEEGHVFVWG---YGILGKGPNLSETALPEMIPPTLFGLTE 386
Query: 286 ED----IVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPA-PR 340
+ + Q+ CG +H ALT G +F +G+ G LG GR P V +P P
Sbjct: 387 FNPEVKVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRV--TMPGEPV 444
Query: 341 NAGDGVD 347
+ GVD
Sbjct: 445 DVACGVD 451
Score = 240 (89.5 bits), Expect = 5.3e-18, P = 5.3e-18
Identities = 92/279 (32%), Positives = 134/279 (48%)
Query: 75 KIVQAAIG-GWHCLAVDDQGRAYAWG-G-NEYGQCGEEPERKDDT-GR--ILRRDIV-IP 127
KI AA G G+ L+ + WG G N+ Q G RKD T G +L V +P
Sbjct: 105 KISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLP 164
Query: 128 QRCAPKLIVRQVAAGGTHSVVLT-REGHVWTWG--------QPWPPGDIKQISVPV-RVQ 177
+ V QV+ G HS+VLT REG V++ G + ++ S V R+Q
Sbjct: 165 LDRPQETKVLQVSCGRAHSLVLTDREG-VFSMGNNAHGQCGRKVVEDEVYSESHKVHRMQ 223
Query: 178 GLE-QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQG-LSGLTLV 235
E QV + G H+L L + G +++ G GQ G G S P + G L+G+T+V
Sbjct: 224 DFEGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGVTVV 283
Query: 236 DIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGG 295
+A G AL+ DG V+GWG E+ +L D + VP+ + + QV+CGG
Sbjct: 284 QVATYGDCCLALSADGGVFGWGNSEYLQLA-SVTDSTQVNVPRCLPFSGVGKVKQVACGG 342
Query: 296 THSVALTRDGHIFSFGRGDHGRLGYGRKVT-TGQPMEVP 333
T L +GH+F +G +G LG G ++ T P +P
Sbjct: 343 TGCAILNEEGHVFVWG---YGILGKGPNLSETALPEMIP 378
Score = 192 (72.6 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 75/245 (30%), Positives = 109/245 (44%)
Query: 75 KIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKL 134
++VQ G H L + D+G Y+ G GQ G T L D+ +
Sbjct: 228 QVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLA-------GV 280
Query: 135 IVRQVAAGGTHSVVLTREGHVWTWG-----QPWPPGDIKQISVP--VRVQGLEQVKLIAV 187
V QVA G + L+ +G V+ WG Q D Q++VP + G+ +VK +A
Sbjct: 281 TVVQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQVAC 340
Query: 188 GAFHNLALQEDGALWAWGNNEYGQLGTG----DTQ-PRSQPIPVQGLSGLT----LVDIA 238
G L E+G ++ WG YG LG G +T P P + GL+ + I
Sbjct: 341 GGTGCAILNEEGHVFVWG---YGILGKGPNLSETALPEMIPPTLFGLTEFNPEVKVSQIR 397
Query: 239 AGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHS 298
G H ALT+ GE++ WG+ G LG G + + P +V + GE V V+CG H
Sbjct: 398 CGLSHFAALTNKGELFVWGKNIRGCLGIGRLE--DQYFPWRVTM-PGEP-VDVACGVDHM 453
Query: 299 VALTR 303
V L +
Sbjct: 454 VTLAK 458
>UNIPROTKB|Q5BIW4 [details] [associations]
symbol:ALS2 "Alsin" species:9598 "Pan troglodytes"
[GO:0001662 "behavioral fear response" evidence=ISS] [GO:0001726
"ruffle" evidence=ISS] [GO:0001881 "receptor recycling"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005769
"early endosome" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006979 "response to oxidative stress" evidence=ISS]
[GO:0007528 "neuromuscular junction development" evidence=ISS]
[GO:0007626 "locomotory behavior" evidence=ISS] [GO:0008104
"protein localization" evidence=ISS] [GO:0014069 "postsynaptic
density" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0016197 "endosomal transport" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0030027 "lamellipodium" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISS] [GO:0031982 "vesicle" evidence=ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=ISS]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISS] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=ISS] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0043197 "dendritic spine" evidence=ISS]
[GO:0043234 "protein complex" evidence=ISS] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISS]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISS] [GO:0048812 "neuron projection morphogenesis"
evidence=ISS] [GO:0051036 "regulation of endosome size"
evidence=ISS] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=ISS] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0043234 GO:GO:0042803
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0030027
GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0001726 eggNOG:COG4642
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 CTD:57679 HOVERGEN:HBG037320 KO:K04575
OrthoDB:EOG4FTVZP GO:GO:0005769 GO:GO:0031982 GO:GO:0017137
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:BK005194 RefSeq:NP_001073389.1
UniGene:Ptr.813 ProteinModelPortal:Q5BIW4 STRING:Q5BIW4
PRIDE:Q5BIW4 GeneID:470613 KEGG:ptr:470613 InParanoid:Q5BIW4
NextBio:20847741 Uniprot:Q5BIW4
Length = 1657
Score = 231 (86.4 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 59/179 (32%), Positives = 92/179 (51%)
Query: 136 VRQVAAGGTHSVVLTREGHVWTWGQ-PWPPGDIKQI-SVPVRVQGL--EQVKLIAVGAFH 191
V Q A G H V+LT +G V+++G PW G ++ S P+ L + V +A G+FH
Sbjct: 43 VLQAALGVKHGVLLTEDGEVYSFGTLPWRSGPVEICPSSPILENALVGQYVVTVATGSFH 102
Query: 192 NLALQEDGALWAWGNNEYGQLGTGDTQ--PRSQPIPVQG-----LSGLTLVDIAAGGWHS 244
+ A+ ++G + WG N GQ + Q P P+ + L + ++ +A G H+
Sbjct: 103 SGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEASPLLAVRILQLACGEEHT 162
Query: 245 TALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTR 303
AL+ E++ WG G +LG PQKV LAG ++QV+CG HS+AL +
Sbjct: 163 LALSISREIWAWGTG--CQLGL-ITTAFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQ 218
Score = 189 (71.6 bits), Expect = 8.1e-23, Sum P(2) = 8.1e-23
Identities = 43/118 (36%), Positives = 63/118 (53%)
Query: 201 LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGE 260
+W WG + GQLG GD PR QP+ V+ L G ++ + AGG+HS ALT +VY WG
Sbjct: 528 VWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNT 587
Query: 261 HGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVAL--TRDGH--IFSFGRGD 314
G+LG D + VP+ + + + V+ G +S+ L T D ++ GR D
Sbjct: 588 FGQLGHSDFPTT---VPRLAKISSENGVWSVAAGRDYSLFLVDTEDFQPGLYYSGRQD 642
Score = 182 (69.1 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 63/213 (29%), Positives = 102/213 (47%)
Query: 162 WPPGDIKQISVPVRVQGL--EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQP 219
W G P R+ G + V A+G H + L EDG ++++G + + G + P
Sbjct: 23 WQAGSFP--ITPERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFGTLPW-RSGPVEICP 79
Query: 220 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 279
S PI L G +V +A G +HS A+TD+G Y WG G+ + + P
Sbjct: 80 -SSPILENALVGQYVVTVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVS 138
Query: 280 V-----NLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPI 334
+ + L I+Q++CG H++AL+ I+++G G +LG +TT P+ P
Sbjct: 139 IADSEASPLLAVRILQLACGEEHTLALSISREIWAWGTGC--QLGL---ITTAFPVTKPQ 193
Query: 335 NIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
+ AG R + + VACG H+LA+V+
Sbjct: 194 KVE--HLAG-----RVVLQ-VACGAFHSLALVQ 218
Score = 159 (61.0 bits), Expect = 8.1e-23, Sum P(2) = 8.1e-23
Identities = 47/138 (34%), Positives = 66/138 (47%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P NAL +V A G +H AV D G AY WG N GQC ++ +
Sbjct: 82 PILENALVGQYVVTVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVS--- 138
Query: 125 VIPQRCAPKLIVR--QVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQ---ISVPVRVQGL 179
+ +P L VR Q+A G H++ L+ +W WG G I ++ P +V+ L
Sbjct: 139 IADSEASPLLAVRILQLACGEEHTLALSISREIWAWGTGCQLGLITTAFPVTKPQKVEHL 198
Query: 180 E-QVKL-IAVGAFHNLAL 195
+V L +A GAFH+LAL
Sbjct: 199 AGRVVLQVACGAFHSLAL 216
Score = 142 (55.0 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 28/75 (37%), Positives = 45/75 (60%)
Query: 252 EVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFG 311
EV+ WG+G+ G+LG GD ++ P V L G++++ + GG HS+ALT ++S+G
Sbjct: 527 EVWTWGKGKEGQLGHGD--VLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWG 584
Query: 312 RGDHGRLGYGRKVTT 326
G+LG+ TT
Sbjct: 585 SNTFGQLGHSDFPTT 599
Score = 54 (24.1 bits), Expect = 6.8e-12, Sum P(2) = 6.8e-12
Identities = 25/88 (28%), Positives = 36/88 (40%)
Query: 66 SQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWG-GNEYGQCGEE-PERKDDTGRILRRD 123
S+ + L +I+Q A G H LA+ +AWG G + G P K L
Sbjct: 142 SEASPLLAVRILQLACGEEHTLALSISREIWAWGTGCQLGLITTAFPVTKPQKVEHLAGR 201
Query: 124 IVIPQRCAPKLIVRQVAAGGTHSVVLTR 151
+V+ QVA G HS+ L +
Sbjct: 202 VVL-----------QVACGAFHSLALVQ 218
Score = 49 (22.3 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 8/24 (33%), Positives = 17/24 (70%)
Query: 307 IFSFGRGDHGRLGYGRKVTTGQPM 330
++++G+G G+LG+G + QP+
Sbjct: 528 VWTWGKGKEGQLGHGDVLPRLQPL 551
>TAIR|locus:2165770 [details] [associations]
symbol:AT5G42140 "AT5G42140" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0046872 EMBL:AB017067 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
HSSP:Q15075 ProtClustDB:CLSN2686442 IPI:IPI00533393
RefSeq:NP_199029.1 UniGene:At.28039 ProteinModelPortal:Q9FHX1
SMR:Q9FHX1 PRIDE:Q9FHX1 EnsemblPlants:AT5G42140.1 GeneID:834219
KEGG:ath:AT5G42140 TAIR:At5g42140 HOGENOM:HOG000240974
InParanoid:Q9FHX1 OMA:RNEVFTW PhylomeDB:Q9FHX1
Genevestigator:Q9FHX1 Uniprot:Q9FHX1
Length = 1073
Score = 275 (101.9 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 78/276 (28%), Positives = 125/276 (45%)
Query: 64 IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRD 123
IP + + + A G H V QG + WG G+ G KD TG L
Sbjct: 262 IPKPLESNVVLDVHHIACGVKHAALVSRQGEVFTWGEASGGRLGHGMG-KDVTGPQLIES 320
Query: 124 IVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI----KQIS--VPVRVQ 177
+ + VA G H+ +T G ++TWG + +S +P R+
Sbjct: 321 LAATS-------IDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRIS 373
Query: 178 G-LE--QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTL 234
G LE Q+ ++ G +H + G L+ +G+ +G LG GD + P V+ LSGL
Sbjct: 374 GPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRT 433
Query: 235 VDIAAGGWHSTALTD-----------DGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLL 283
+ +A G WH+ A+ + G+++ WG G+ RLG GD K ++ P V+ L
Sbjct: 434 IAVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGD--KEPRLKPTCVSAL 491
Query: 284 AGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLG 319
+V+CG + +V LT G +++ G +G+LG
Sbjct: 492 IDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLG 527
Score = 269 (99.8 bits), Expect = 4.4e-21, P = 4.4e-21
Identities = 99/340 (29%), Positives = 151/340 (44%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDT 116
G K P + +L+ T I A G +H AV G Y WG + G D +
Sbjct: 307 GMGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWGDGTHN-AGLLGHGTDVS 365
Query: 117 GRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPW----PPGDIKQISV 172
I +R I P L + V+ G H+ ++T G ++T+G GD + +
Sbjct: 366 HWIPKR-ISGPLE---GLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFY 421
Query: 173 PVRVQGLEQVKLIAV--GAFHNLALQE-----------DGALWAWGNNEYGQLGTGDTQP 219
P V+ L ++ IAV G +H A+ E G L+ WG+ + +LG GD +P
Sbjct: 422 PREVESLSGLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEP 481
Query: 220 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDND-KSSKMVPQ 278
R +P V L T +A G + LT G+VY G +G+LG + D K +V
Sbjct: 482 RLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLGNPNADGKLPCLVED 541
Query: 279 KVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPA 338
K L + + +++CG H LT +F++G+G +GRLG+G P V
Sbjct: 542 K---LTKDCVEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHGDVEDRKAPTLV------ 592
Query: 339 PRNAGDGVDRRWIAKLVACGGRHTLAIV--EWQ--TEESK 374
D + R + K +ACG T AI +W TE+S+
Sbjct: 593 -----DALKERHV-KNIACGSNFTAAICLHKWVSGTEQSQ 626
Score = 252 (93.8 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 74/259 (28%), Positives = 123/259 (47%)
Query: 121 RRDIVIPQRCAPKLI--VRQVAAGGTHSVVLTREGHVWTWGQP----WPPGDIKQISVPV 174
R D++IP+ ++ V +A G H+ +++R+G V+TWG+ G K ++ P
Sbjct: 257 RSDVLIPKPLESNVVLDVHHIACGVKHAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQ 316
Query: 175 RVQGLE--QVKLIAVGAFHNLALQEDGALWAWGNNEY--GQLGTGDTQPRSQPIPVQG-L 229
++ L + +A G FH A+ G ++ WG+ + G LG G P + G L
Sbjct: 317 LIESLAATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPL 376
Query: 230 SGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIV 289
GL + ++ G WH+ +T G+++ +G G G LG GD K + P++V L+G +
Sbjct: 377 EGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGD--KETVFYPREVESLSGLRTI 434
Query: 290 QVSCGGTHSVALTRDGHIFSFGRGDHGRL---GYGRKVTTGQPMEVPINIPAPRNAGDGV 346
V+CG H+ A+ S G+L G G K G + P P +A +
Sbjct: 435 AVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSAL--I 492
Query: 347 DRRWIAKLVACGGRHTLAI 365
D + VACG H+L +
Sbjct: 493 DHTF--HRVACG--HSLTV 507
Score = 250 (93.1 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 70/201 (34%), Positives = 101/201 (50%)
Query: 170 ISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGL 229
I P+ + V IA G H + G ++ WG G+LG G + + P ++ L
Sbjct: 262 IPKPLESNVVLDVHHIACGVKHAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESL 321
Query: 230 SGLTLVDIAAGGWHSTALTDDGEVYGWGRGEH--GRLGFGDNDKSSKMVPQKVN-LLAGE 286
+ ++ +A G +H+ A+T GE+Y WG G H G LG G + S +P++++ L G
Sbjct: 322 AATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTD--VSHWIPKRISGPLEGL 379
Query: 287 DIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGV 346
I VSCG H+ +T G +F+FG G G LG+G K T P EV + G+
Sbjct: 380 QIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREV--------ESLSGL 431
Query: 347 DRRWIAKLVACGGRHTLAIVE 367
R IA VACG H AIVE
Sbjct: 432 --RTIA--VACGVWHAAAIVE 448
Score = 201 (75.8 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 68/269 (25%), Positives = 112/269 (41%)
Query: 46 GSRNSLAICDDGKTKTENIPSQVNA-LSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYG 104
G+ N+ + G + IP +++ L +I + G WH + G+ + +G +G
Sbjct: 351 GTHNA-GLLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFG 409
Query: 105 QCGE-EPE-----RKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTW 158
G + E R+ ++ LR V IV + THS G ++TW
Sbjct: 410 VLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIV---THSSSSVSSGKLFTW 466
Query: 159 GQPWPP----GDIKQISVPVRVQGLEQVKLIAVGAFHNLA--LQEDGALWAWGNNEYGQL 212
G GD + P V L V H+L L G ++ G+ YGQL
Sbjct: 467 GDGDKSRLGHGDKEPRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQL 526
Query: 213 GTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKS 272
G + + + L+ + +IA G +H LT EV+ WG+G +GRLG GD +
Sbjct: 527 GNPNADGKLPCLVEDKLTKDCVEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHGDVE-- 584
Query: 273 SKMVPQKVNLLAGEDIVQVSCGGTHSVAL 301
+ P V+ L + ++CG + A+
Sbjct: 585 DRKAPTLVDALKERHVKNIACGSNFTAAI 613
Score = 53 (23.7 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 12/55 (21%), Positives = 25/55 (45%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKT 61
+ WG G+LG G ++ ++++L + V G ++ A+ G+ T
Sbjct: 293 VFTWGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYT 347
>UNIPROTKB|Q96Q42 [details] [associations]
symbol:ALS2 "Alsin" species:9606 "Homo sapiens" [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016050 "vesicle organization"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016601 "Rac protein signal transduction" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0005769 "early endosome"
evidence=IDA] [GO:0007032 "endosome organization" evidence=IGI;NAS]
[GO:0043234 "protein complex" evidence=IDA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0017137 "Rab GTPase binding" evidence=NAS;IDA] [GO:0051036
"regulation of endosome size" evidence=IEP] [GO:0032855 "positive
regulation of Rac GTPase activity" evidence=IDA] [GO:0035022
"positive regulation of Rac protein signal transduction"
evidence=IC] [GO:0030425 "dendrite" evidence=IDA] [GO:0048812
"neuron projection morphogenesis" evidence=IDA] [GO:0043539
"protein serine/threonine kinase activator activity" evidence=IDA]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=IDA] [GO:0001726 "ruffle" evidence=ISS] [GO:0030027
"lamellipodium" evidence=ISS] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=NAS] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0030426 "growth cone" evidence=ISS] [GO:0005813 "centrosome"
evidence=IDA] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=IDA] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 EMBL:AB053305 EMBL:AB053306
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0016020 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0008219 EMBL:CH471063 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0048812 GO:GO:0007626 GO:GO:0035249 GO:GO:0043539
GO:GO:0030027 GO:GO:0016197 GO:GO:0030426 Gene3D:1.20.900.10
SUPFAM:SSF48065 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0001726 GO:GO:0016601
GO:GO:0007032 eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123
Pfam:PF02493 SMART:SM00698 PROSITE:PS51205 EMBL:AF391100
EMBL:AB046783 EMBL:AK023024 EMBL:AC007242 EMBL:AC007279
EMBL:BC029174 IPI:IPI00242146 IPI:IPI00295004 IPI:IPI00295005
RefSeq:NP_001129217.1 RefSeq:NP_065970.2 UniGene:Hs.471096
UniGene:Hs.621812 ProteinModelPortal:Q96Q42 SMR:Q96Q42
MINT:MINT-1632128 STRING:Q96Q42 PhosphoSite:Q96Q42 DMDM:296434394
PaxDb:Q96Q42 PRIDE:Q96Q42 Ensembl:ENST00000264276
Ensembl:ENST00000467448 GeneID:57679 KEGG:hsa:57679 UCSC:uc002uyo.3
UCSC:uc002uyq.3 UCSC:uc002uyr.3 CTD:57679 GeneCards:GC02M202564
H-InvDB:HIX0200249 HGNC:HGNC:443 HPA:HPA046588 MIM:205100
MIM:606352 MIM:606353 MIM:607225 neXtProt:NX_Q96Q42 Orphanet:803
Orphanet:293168 Orphanet:300605 Orphanet:247604 PharmGKB:PA24732
HOVERGEN:HBG037320 InParanoid:Q96Q42 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GenomeRNAi:57679 NextBio:64490
ArrayExpress:Q96Q42 Bgee:Q96Q42 CleanEx:HS_ALS2
Genevestigator:Q96Q42 GermOnline:ENSG00000003393 GO:GO:0005769
GO:GO:0031982 GO:GO:0017137 GO:GO:0017112 GO:GO:0030676
GO:GO:0005087 GO:GO:0001662 GO:GO:0032855 GO:GO:0035022
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
Uniprot:Q96Q42
Length = 1657
Score = 230 (86.0 bits), Expect = 3.3e-16, Sum P(2) = 3.3e-16
Identities = 59/179 (32%), Positives = 92/179 (51%)
Query: 136 VRQVAAGGTHSVVLTREGHVWTWGQ-PWPPGDIKQI-SVPVRVQGL--EQVKLIAVGAFH 191
V Q A G H V+LT +G V+++G PW G ++ S P+ L + V +A G+FH
Sbjct: 43 VLQAALGVKHGVLLTEDGEVYSFGTLPWRSGPVEICPSSPILENALVGQYVITVATGSFH 102
Query: 192 NLALQEDGALWAWGNNEYGQLGTGDTQ--PRSQPIPVQG-----LSGLTLVDIAAGGWHS 244
+ A+ ++G + WG N GQ + Q P P+ + L + ++ +A G H+
Sbjct: 103 SGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEASPLLAVRILQLACGEEHT 162
Query: 245 TALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTR 303
AL+ E++ WG G +LG PQKV LAG ++QV+CG HS+AL +
Sbjct: 163 LALSISREIWAWGTG--CQLGL-ITTAFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQ 218
Score = 188 (71.2 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 42/118 (35%), Positives = 63/118 (53%)
Query: 201 LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGE 260
+W WG + GQLG GD PR QP+ V+ L G ++ + AGG+HS ALT +VY WG
Sbjct: 528 VWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNT 587
Query: 261 HGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVAL--TRDGH--IFSFGRGD 314
G+LG D + VP+ + + + ++ G +S+ L T D ++ GR D
Sbjct: 588 FGQLGHSDFPTT---VPRLAKISSENGVWSIAAGRDYSLFLVDTEDFQPGLYYSGRQD 642
Score = 181 (68.8 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 62/213 (29%), Positives = 102/213 (47%)
Query: 162 WPPGDIKQISVPVRVQGL--EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQP 219
W G P R+ G + V A+G H + L EDG ++++G + + G + P
Sbjct: 23 WQAGSFP--ITPERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFGTLPW-RSGPVEICP 79
Query: 220 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 279
S PI L G ++ +A G +HS A+TD+G Y WG G+ + + P
Sbjct: 80 -SSPILENALVGQYVITVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVS 138
Query: 280 V-----NLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPI 334
+ + L I+Q++CG H++AL+ I+++G G +LG +TT P+ P
Sbjct: 139 IADSEASPLLAVRILQLACGEEHTLALSISREIWAWGTGC--QLGL---ITTAFPVTKPQ 193
Query: 335 NIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
+ AG R + + VACG H+LA+V+
Sbjct: 194 KVE--HLAG-----RVVLQ-VACGAFHSLALVQ 218
Score = 158 (60.7 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 46/138 (33%), Positives = 66/138 (47%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P NAL ++ A G +H AV D G AY WG N GQC ++ +
Sbjct: 82 PILENALVGQYVITVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVS--- 138
Query: 125 VIPQRCAPKLIVR--QVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQ---ISVPVRVQGL 179
+ +P L VR Q+A G H++ L+ +W WG G I ++ P +V+ L
Sbjct: 139 IADSEASPLLAVRILQLACGEEHTLALSISREIWAWGTGCQLGLITTAFPVTKPQKVEHL 198
Query: 180 E-QVKL-IAVGAFHNLAL 195
+V L +A GAFH+LAL
Sbjct: 199 AGRVVLQVACGAFHSLAL 216
Score = 142 (55.0 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 28/75 (37%), Positives = 45/75 (60%)
Query: 252 EVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFG 311
EV+ WG+G+ G+LG GD ++ P V L G++++ + GG HS+ALT ++S+G
Sbjct: 527 EVWTWGKGKEGQLGHGD--VLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWG 584
Query: 312 RGDHGRLGYGRKVTT 326
G+LG+ TT
Sbjct: 585 SNTFGQLGHSDFPTT 599
Score = 122 (48.0 bits), Expect = 0.00081, P = 0.00081
Identities = 55/204 (26%), Positives = 94/204 (46%)
Query: 118 RILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVP 173
R+LR+ + R +++ +G +++ + VWTWG+ GD+ P
Sbjct: 494 RLLRKAARVKTRT---VVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQP 550
Query: 174 VRVQGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSG 231
+ V+ L+ ++I + G +H+LAL +++WG+N +GQLG D P + P + S
Sbjct: 551 LCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSDF-PTTVPRLAKISSE 609
Query: 232 LTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLG--FGDN---DKSSKMVPQKVNLLAGE 286
+ IAAG +S L D E + G GR GDN + S P ++
Sbjct: 610 NGVWSIAAGRDYSLFLVDT-EDFQPGLYYSGRQDPTEGDNLPENHSGSKTPVLLSCSKLG 668
Query: 287 DIVQVSCGGTHSVALTRDGHIFSF 310
I +V+ G +AL D +I +
Sbjct: 669 YISRVTAGKDSYLALV-DKNIMGY 691
Score = 54 (24.1 bits), Expect = 8.9e-12, Sum P(2) = 8.9e-12
Identities = 25/88 (28%), Positives = 36/88 (40%)
Query: 66 SQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWG-GNEYGQCGEE-PERKDDTGRILRRD 123
S+ + L +I+Q A G H LA+ +AWG G + G P K L
Sbjct: 142 SEASPLLAVRILQLACGEEHTLALSISREIWAWGTGCQLGLITTAFPVTKPQKVEHLAGR 201
Query: 124 IVIPQRCAPKLIVRQVAAGGTHSVVLTR 151
+V+ QVA G HS+ L +
Sbjct: 202 VVL-----------QVACGAFHSLALVQ 218
Score = 49 (22.3 bits), Expect = 3.3e-16, Sum P(2) = 3.3e-16
Identities = 8/24 (33%), Positives = 17/24 (70%)
Query: 307 IFSFGRGDHGRLGYGRKVTTGQPM 330
++++G+G G+LG+G + QP+
Sbjct: 528 VWTWGKGKEGQLGHGDVLPRLQPL 551
>UNIPROTKB|I3LT85 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0031492 "nucleosomal DNA binding" evidence=IEA]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0007088 GO:GO:0007059 GO:GO:0007052 GO:GO:0051225
GO:GO:0000082 GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 OMA:GTESCFV EMBL:FP565629 RefSeq:XP_003482053.1
Ensembl:ENSSSCT00000028011 GeneID:100621543 KEGG:ssc:100621543
Uniprot:I3LT85
Length = 421
Score = 251 (93.4 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 81/271 (29%), Positives = 126/271 (46%)
Query: 76 IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLI 135
IVQA GG H + + G+ Y++G N+ G G DT + ++P + +
Sbjct: 69 IVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGR------DTS--VEGSEMVPGKVELQEK 120
Query: 136 VRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI-------KQISVPVRVQGLEQVKLIAVG 188
V QV+AG +H+ LT +G V+ WG + K+ VPV+VQ V +A G
Sbjct: 121 VVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLSMPVVKVASG 180
Query: 189 AFHNLALQEDGALWAWGNNEYGQLGT--------GDTQ-------PRSQPIPVQGLSG-L 232
H + L DG L+ G+ E GQLG G Q P+ + +G G +
Sbjct: 181 NDHLVMLTADGELYTLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHV 240
Query: 233 TLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAG--EDIVQ 290
D G + + A++ +G VYG+G + +LG + S VPQ + + V+
Sbjct: 241 RFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTPGTE--SCFVPQNLTSFKNSTKSWVR 298
Query: 291 VSCGGTHSVALTRDGHIFSFGRGDHGRLGYG 321
S G H+V + +G +S GR ++GRLG G
Sbjct: 299 FSGGQHHTVCMDSEGRAYSLGRAEYGRLGLG 329
Score = 220 (82.5 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 57/188 (30%), Positives = 97/188 (51%)
Query: 188 GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIA-AGGWHSTA 246
GA+ A+ +G ++ +G + Y QLGT T+ P + T + +GG H T
Sbjct: 248 GAYFTFAISSEGHVYGFGLSNYHQLGTPGTESCFVPQNLTSFKNSTKSWVRFSGGQHHTV 307
Query: 247 LTD-DGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDG 305
D +G Y GR E+GRLG G+ + K VP ++ L + V+CG + A+T+DG
Sbjct: 308 CMDSEGRAYSLGRAEYGRLGLGEGAEE-KSVPTLISRLPA--VSSVACGASVGYAVTKDG 364
Query: 306 HIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
+F++G G + +LG G++ P+E+ G ++ R + V+ GG+HT+ +
Sbjct: 365 RVFAWGMGTNYQLGTGQEEDAWSPVEM---------TGKQLENRMVLS-VSSGGQHTVLL 414
Query: 366 VEWQTEES 373
V+ E+S
Sbjct: 415 VK-DKEQS 421
Score = 215 (80.7 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 70/237 (29%), Positives = 113/237 (47%)
Query: 144 THSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEQVKLIAV---------GAFHNLA 194
+H T G V T GQ GD+ Q+ + V ++ L+ + G H +
Sbjct: 26 SHRSHSTEPGLVLTLGQ----GDVGQLGLGENVMERKKPALVPIPEDIVQAEAGGMHTVC 81
Query: 195 LQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVY 254
L + G ++++G N+ G LG + S+ +P + +V ++AG H+ ALT+DG V+
Sbjct: 82 LSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVF 141
Query: 255 GWG--RGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGR 312
WG R +G +G + K S MVP +V L +V+V+ G H V LT DG +++ G
Sbjct: 142 LWGSFRDNNGVIGLLEPMKKS-MVPVQVQL--SMPVVKVASGNDHLVMLTADGELYTLGS 198
Query: 313 GDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVEWQ 369
G+ G+LG VP + A R G++R + K V R + V +Q
Sbjct: 199 GEQGQLG-----------RVP-ELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQ 243
Score = 214 (80.4 bits), Expect = 6.6e-17, Sum P(2) = 6.6e-17
Identities = 75/263 (28%), Positives = 117/263 (44%)
Query: 60 KTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTG-- 117
K +P QV LS +V+ A G H + + G Y G E GQ G PE + G
Sbjct: 160 KKSMVPVQVQ-LS-MPVVKVASGNDHLVMLTADGELYTLGSGEQGQLGRVPELFANRGGR 217
Query: 118 ----RILRRDIVIPQRCAPKLIVR-QVAAGGTH-SVVLTREGHVWTWG-----QPWPPGD 166
R+L V+ + + VR Q A G + + ++ EGHV+ +G Q PG
Sbjct: 218 QGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTPGT 277
Query: 167 IKQISVPVRVQGLEQVKLIAV----GAFHNLALQEDGALWAWGNNEYGQLGTGD-TQPRS 221
+ VP + + V G H + + +G ++ G EYG+LG G+ + +S
Sbjct: 278 -ESCFVPQNLTSFKNSTKSWVRFSGGQHHTVCMDSEGRAYSLGRAEYGRLGLGEGAEEKS 336
Query: 222 QPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVN 281
P + L ++ +A G A+T DG V+ WG G + +LG G + + V
Sbjct: 337 VPTLISRLPAVS--SVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQEEDAWSPVEMTGK 394
Query: 282 LLAGEDIVQVSCGGTHSVALTRD 304
L ++ VS GG H+V L +D
Sbjct: 395 QLENRMVLSVSSGGQHTVLLVKD 417
Score = 102 (41.0 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 45/174 (25%), Positives = 77/174 (44%)
Query: 7 IIAWGSGEDGQLGIGNNE-EREWVCVVKALEPYKVRSVVAGSRNSLAI----------CD 55
++ G G+ GQLG+G N ER+ +V P + AG +++ + C+
Sbjct: 37 VLTLGQGDVGQLGLGENVMERKKPALVPI--PEDIVQAEAGGMHTVCLSKSGQVYSFGCN 94
Query: 56 D----GK-TKTENIPSQVNALS-NTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 109
D G+ T E + K+VQ + G H A+ + GR + WG
Sbjct: 95 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSF-------- 146
Query: 110 PERKDDTGRI--LR--RDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG 159
+D+ G I L + ++P + + V +VA+G H V+LT +G ++T G
Sbjct: 147 ---RDNNGVIGLLEPMKKSMVPVQVQLSMPVVKVASGNDHLVMLTADGELYTLG 197
Score = 55 (24.4 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 14/58 (24%), Positives = 29/58 (50%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK 58
++ + + ++G ++G LG + E + K KV V AG ++ A+ +DG+
Sbjct: 82 LSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGR 139
Score = 42 (19.8 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 8/9 (88%), Positives = 8/9 (88%)
Query: 11 GSGEDGQLG 19
GSGE GQLG
Sbjct: 197 GSGEQGQLG 205
>TAIR|locus:2156233 [details] [associations]
symbol:RUG2 "RCC1/UVR8/GEF-like 2" species:3702
"Arabidopsis thaliana" [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HSSP:P18754 EMBL:BT005508 EMBL:AK117526 IPI:IPI00527447
RefSeq:NP_199644.2 UniGene:At.29855 ProteinModelPortal:Q8GYL6
SMR:Q8GYL6 PRIDE:Q8GYL6 EnsemblPlants:AT5G48330.1 GeneID:834886
KEGG:ath:AT5G48330 TAIR:At5g48330 HOGENOM:HOG000238877
InParanoid:Q8GYL6 OMA:SAGHYHS PhylomeDB:Q8GYL6
ProtClustDB:CLSN2680477 ArrayExpress:Q8GYL6 Genevestigator:Q8GYL6
Uniprot:Q8GYL6
Length = 455
Score = 272 (100.8 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 62/167 (37%), Positives = 91/167 (54%)
Query: 173 PVRVQGL-EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGT----GDTQPRSQPIPVQ 227
P V L + I+ G +H+LA+ G +WAWG N+ GQLG RS+P V+
Sbjct: 74 PTVVSNLPSDISSISAGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVE 133
Query: 228 GLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGED 287
GL + + A G S A+ DDG ++ WGR + G+LG G+ ++ VP +V LA E
Sbjct: 134 GLENVNVQAAFASGVVSAAIGDDGSLWVWGRSKRGQLGLGNGIIEAR-VPSRVENLAAEH 192
Query: 288 IVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPI 334
+V+VS G H++ALT DG +F +G GR+G G P+E +
Sbjct: 193 VVKVSLGWGHALALTVDGKVFGWGYVADGRVG-----NVGLPLEASL 234
Score = 215 (80.7 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 88/313 (28%), Positives = 136/313 (43%)
Query: 6 SIIAWGSGEDGQLGIGNNE-EREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKT----- 59
S+ WG + GQLG+GN E V+ L V V G ++LA+ DGK
Sbjct: 158 SLWVWGRSKRGQLGLGNGIIEARVPSRVENLAAEHVVKVSLGWGHALALTVDGKVFGWGY 217
Query: 60 ----KTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDD 115
+ N+ + A I ++ G H A D A + E +++D
Sbjct: 218 VADGRVGNVGLPLEASLLDSITDGSMKGHH--AAGDLNLEAA-----EKKVVEAMSKEND 270
Query: 116 TGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP--WPPGDIKQISVP 173
I ++ + C K V +A G HS++L +G + + G G KQ
Sbjct: 271 MP-IAWEPCLVEETCNEK--VADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLGM 327
Query: 174 VRVQGLEQVKLIAVGAFHNLALQEDGA--LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSG 231
V E IA G H+LA+ G + +WG N QLG G +P + P V+G G
Sbjct: 328 KPVDITESPISIAAGLGHSLAICNRGERNILSWGWNRSRQLGRG--KPENLPREVEGFDG 385
Query: 232 LTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQV 291
+ ++AG HS +T+ GE + WG G++GRLG G + S + P + + G ++Q
Sbjct: 386 ESPASVSAGRVHSLCVTEKGEAWVWGCGKNGRLGLGSS--SDEPEPMLLEDVEG-CVLQA 442
Query: 292 SCGGTHSVALTRD 304
G HS+ L +
Sbjct: 443 VAGFDHSLILVAE 455
Score = 211 (79.3 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 80/292 (27%), Positives = 127/292 (43%)
Query: 59 TKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGR 118
T N+PS ++++S G +H LAV G +AWG N+ GQ G D+ R
Sbjct: 75 TVVSNLPSDISSIS--------AGHYHSLAVTSSGEIWAWGRNDEGQLGRIVI---DSSR 123
Query: 119 ILRRDIVIPQRCA--PKLIVRQVAAGGTHSVVLTREGHVWTWG-----QPWPPGDIKQIS 171
R + P+R + V+ A G S + +G +W WG Q I +
Sbjct: 124 DSRSE---PKRVEGLENVNVQAAFASGVVSAAIGDDGSLWVWGRSKRGQLGLGNGIIEAR 180
Query: 172 VPVRVQGL--EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGL 229
VP RV+ L E V +++G H LAL DG ++ WG G++G P+ L
Sbjct: 181 VPSRVENLAAEHVVKVSLGWGHALALTVDGKVFGWGYVADGRVGNVGL-----PLEASLL 235
Query: 230 SGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIV 289
+T D + G H+ D + + + +ND P V E +
Sbjct: 236 DSIT--DGSMKGHHAAG---DLNLEAAEKKVVEAMS-KENDMPIAWEPCLVEETCNEKVA 289
Query: 290 QVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEV---PINIPA 338
++CG HS+ L DG + S G +G+LG ++ +P+++ PI+I A
Sbjct: 290 DIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLGMKPVDITESPISIAA 341
Score = 197 (74.4 bits), Expect = 4.5e-16, Sum P(2) = 4.5e-16
Identities = 53/153 (34%), Positives = 77/153 (50%)
Query: 180 EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAA 239
E+V IA G+ H+L L DG L + G+N YGQLG +P+ + + + IAA
Sbjct: 286 EKVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLGMKPVDITE----SPISIAA 341
Query: 240 GGWHSTALTDDGE--VYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTH 297
G HS A+ + GE + WG +LG G + +P++V GE VS G H
Sbjct: 342 GLGHSLAICNRGERNILSWGWNRSRQLGRGKPEN----LPREVEGFDGESPASVSAGRVH 397
Query: 298 SVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPM 330
S+ +T G + +G G +GRLG G +PM
Sbjct: 398 SLCVTEKGEAWVWGCGKNGRLGLGSSSDEPEPM 430
Score = 169 (64.5 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 77/318 (24%), Positives = 127/318 (39%)
Query: 56 DGKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDD 115
D + + P +V L N + A G A+ D G + WG ++ GQ G
Sbjct: 120 DSSRDSRSEPKRVEGLENVNVQAAFASGVVSAAIGDDGSLWVWGRSKRGQLGL------G 173
Query: 116 TGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVR 175
G I R + A + +V+ V+ G H++ LT +G V+ WG G + + +P+
Sbjct: 174 NGIIEARVPSRVENLAAEHVVK-VSLGWGHALALTVDGKVFGWGYV-ADGRVGNVGLPLE 231
Query: 176 VQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS-QPIPVQGLSGLTL 234
L+ + ++ H D L A + + P + +P V+ +
Sbjct: 232 ASLLDSITDGSMKGHHAAG---DLNLEAAEKKVVEAMSKENDMPIAWEPCLVEETCNEKV 288
Query: 235 VDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCG 294
DIA G HS L DG + G +G+LG D K P + E + ++ G
Sbjct: 289 ADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLGMK--PVDIT----ESPISIAAG 342
Query: 295 GTHSVALTRDG--HIFSFGRGDHGRLGYGR-----KVTTGQPMEVPINIPAPRNAGDGVD 347
HS+A+ G +I S+G +LG G+ + G E P ++ A R V
Sbjct: 343 LGHSLAICNRGERNILSWGWNRSRQLGRGKPENLPREVEGFDGESPASVSAGRVHSLCVT 402
Query: 348 RRWIAKLVACGGRHTLAI 365
+ A + CG L +
Sbjct: 403 EKGEAWVWGCGKNGRLGL 420
Score = 69 (29.3 bits), Expect = 4.5e-16, Sum P(2) = 4.5e-16
Identities = 21/61 (34%), Positives = 30/61 (49%)
Query: 1 MASTTSIIAWGSGEDGQLGI----GNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDD 56
+ S+ I AWG ++GQLG + + R V+ LE V++ A S AI DD
Sbjct: 97 VTSSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAAFASGVVSAAIGDD 156
Query: 57 G 57
G
Sbjct: 157 G 157
Score = 49 (22.3 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 16/59 (27%), Positives = 30/59 (50%)
Query: 6 SIIAWGSGEDGQLGIGNNE------EREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK 58
+++++G G G LG+ ++ + VV L P + S+ AG +SLA+ G+
Sbjct: 45 TVMSFGDGNLGALGLSSSSIPGMGMDAYEPTVVSNL-PSDISSISAGHYHSLAVTSSGE 102
>UNIPROTKB|P18754 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0007088
"regulation of mitosis" evidence=IDA] [GO:0000082 "G1/S transition
of mitotic cell cycle" evidence=IMP] [GO:0007090 "regulation of S
phase of mitotic cell cycle" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
[GO:0007052 "mitotic spindle organization" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0031492 "nucleosomal DNA binding" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007059
"chromosome segregation" evidence=IMP] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0016032 "viral reproduction" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Reactome:REACT_116125 GO:GO:0007088 GO:GO:0007059
GO:GO:0005654 GO:GO:0016032 GO:GO:0051301 GO:GO:0007067
GO:GO:0007052 GO:GO:0051225 GO:GO:0000082 GO:GO:0031965
GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0000794 GO:GO:0042393 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 PDB:1I2M PDBsum:1I2M KO:K11493
EMBL:X12654 EMBL:X06130 EMBL:D00591 EMBL:AF498924 EMBL:BC007300
EMBL:BC010067 EMBL:BC036903 EMBL:BC069198 EMBL:S75708
IPI:IPI00001661 IPI:IPI00747309 PIR:A26691 RefSeq:NP_001041659.1
RefSeq:NP_001041660.1 RefSeq:NP_001041664.1 RefSeq:NP_001260.1
UniGene:Hs.469723 PDB:1A12 PDBsum:1A12 ProteinModelPortal:P18754
SMR:P18754 DIP:DIP-35416N IntAct:P18754 MINT:MINT-240062
STRING:P18754 PhosphoSite:P18754 DMDM:132170 PaxDb:P18754
PRIDE:P18754 DNASU:1104 Ensembl:ENST00000373831
Ensembl:ENST00000373832 Ensembl:ENST00000373833
Ensembl:ENST00000398958 GeneID:1104 KEGG:hsa:1104 UCSC:uc001bqa.2
UCSC:uc001bqf.2 CTD:1104 GeneCards:GC01P028834 HGNC:HGNC:1913
HPA:CAB015413 HPA:HPA027573 HPA:HPA027574 MIM:179710
neXtProt:NX_P18754 PharmGKB:PA26449 HOGENOM:HOG000234341
HOVERGEN:HBG017712 OMA:RETTEEG PhylomeDB:P18754
EvolutionaryTrace:P18754 GenomeRNAi:1104 NextBio:4572
ArrayExpress:P18754 Bgee:P18754 CleanEx:HS_RCC1
Genevestigator:P18754 GermOnline:ENSG00000180198 Uniprot:P18754
Length = 421
Score = 235 (87.8 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 79/271 (29%), Positives = 124/271 (45%)
Query: 76 IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLI 135
+VQA GG H + + G+ Y++G N+ G G DT + ++P + +
Sbjct: 69 VVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGR------DTS--VEGSEMVPGKVELQEK 120
Query: 136 VRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI-------KQISVPVRVQGLEQVKLIAVG 188
V QV+AG +H+ LT +G V+ WG + K+ VPV+VQ V +A G
Sbjct: 121 VVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASG 180
Query: 189 AFHNLALQEDGALWAWGNNEYGQLGT--------GDTQ-------PRSQPIPVQGLSG-L 232
H + L DG L+ G E GQLG G Q P+ + +G G +
Sbjct: 181 NDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHV 240
Query: 233 TLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAG--EDIVQ 290
D G + + A++ +G VYG+G + +LG + S +PQ + + V
Sbjct: 241 RFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTE--SCFIPQNLTSFKNSTKSWVG 298
Query: 291 VSCGGTHSVALTRDGHIFSFGRGDHGRLGYG 321
S G H+V + +G +S GR ++GRLG G
Sbjct: 299 FSGGQHHTVCMDSEGKAYSLGRAEYGRLGLG 329
Score = 217 (81.4 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 71/237 (29%), Positives = 114/237 (48%)
Query: 144 THSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEQVKLIAV---------GAFHNLA 194
+H T G V T GQ GD+ Q+ + V ++ L+++ G H +
Sbjct: 26 SHRSHSTEPGLVLTLGQ----GDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVC 81
Query: 195 LQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVY 254
L + G ++++G N+ G LG + S+ +P + +V ++AG H+ ALTDDG V+
Sbjct: 82 LSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVF 141
Query: 255 GWG--RGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGR 312
WG R +G +G + K S MVP +V L +V+V+ G H V LT DG +++ G
Sbjct: 142 LWGSFRDNNGVIGLLEPMKKS-MVPVQVQL--DVPVVKVASGNDHLVMLTADGDLYTLGC 198
Query: 313 GDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVEWQ 369
G+ G+LG VP + A R G++R + K V R + V +Q
Sbjct: 199 GEQGQLG-----------RVP-ELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQ 243
Score = 215 (80.7 bits), Expect = 3.1e-22, Sum P(2) = 3.1e-22
Identities = 56/188 (29%), Positives = 97/188 (51%)
Query: 188 GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIA-AGGWHSTA 246
GA+ A+ +G ++ +G + Y QLGT T+ P + T + +GG H T
Sbjct: 248 GAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTV 307
Query: 247 LTD-DGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDG 305
D +G+ Y GR E+GRLG G+ + K +P ++ L + V+CG + A+T+DG
Sbjct: 308 CMDSEGKAYSLGRAEYGRLGLGEGAEE-KSIPTLISRLPA--VSSVACGASVGYAVTKDG 364
Query: 306 HIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
+F++G G + +LG G+ P+E+ G ++ R + V+ GG+HT+ +
Sbjct: 365 RVFAWGMGTNYQLGTGQDEDAWSPVEM---------MGKQLENRVVLS-VSSGGQHTVLL 414
Query: 366 VEWQTEES 373
V+ E+S
Sbjct: 415 VK-DKEQS 421
Score = 209 (78.6 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 72/263 (27%), Positives = 117/263 (44%)
Query: 60 KTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTG-- 117
K +P QV + +V+ A G H + + G Y G E GQ G PE + G
Sbjct: 160 KKSMVPVQVQL--DVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGR 217
Query: 118 ----RILRRDIVIPQRCAPKLIVR-QVAAGGTH-SVVLTREGHVWTWG-----QPWPPGD 166
R+L V+ + + VR Q A G + + ++ EGHV+ +G Q PG
Sbjct: 218 QGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGT 277
Query: 167 IKQISVPVRVQGLEQVKLIAVG----AFHNLALQEDGALWAWGNNEYGQLGTGD-TQPRS 221
+ +P + + VG H + + +G ++ G EYG+LG G+ + +S
Sbjct: 278 -ESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKS 336
Query: 222 QPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVN 281
P + L ++ +A G A+T DG V+ WG G + +LG G ++ + V
Sbjct: 337 IPTLISRLPAVS--SVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMMGK 394
Query: 282 LLAGEDIVQVSCGGTHSVALTRD 304
L ++ VS GG H+V L +D
Sbjct: 395 QLENRVVLSVSSGGQHTVLLVKD 417
Score = 105 (42.0 bits), Expect = 3.1e-22, Sum P(2) = 3.1e-22
Identities = 47/174 (27%), Positives = 77/174 (44%)
Query: 7 IIAWGSGEDGQLGIGNNE-EREWVCVVKALEPYKVRSVVAGSRNSLAI----------CD 55
++ G G+ GQLG+G N ER+ +V P V AG +++ + C+
Sbjct: 37 VLTLGQGDVGQLGLGENVMERKKPALVSI--PEDVVQAEAGGMHTVCLSKSGQVYSFGCN 94
Query: 56 D----GK-TKTENIPSQVNALS-NTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 109
D G+ T E + K+VQ + G H A+ D GR + WG
Sbjct: 95 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSF-------- 146
Query: 110 PERKDDTGRI--LR--RDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG 159
+D+ G I L + ++P + + V +VA+G H V+LT +G ++T G
Sbjct: 147 ---RDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLG 197
Score = 59 (25.8 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 15/58 (25%), Positives = 29/58 (50%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK 58
++ + + ++G ++G LG + E + K KV V AG ++ A+ DDG+
Sbjct: 82 LSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGR 139
Score = 37 (18.1 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 7/9 (77%), Positives = 7/9 (77%)
Query: 11 GSGEDGQLG 19
G GE GQLG
Sbjct: 197 GCGEQGQLG 205
>ZFIN|ZDB-GENE-040426-2213 [details] [associations]
symbol:rcc2 "regulator of chromosome condensation
2" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-040426-2213 GO:GO:0005730 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC066628
IPI:IPI00486648 RefSeq:NP_998341.1 UniGene:Dr.828
ProteinModelPortal:Q6NYE2 STRING:Q6NYE2 PRIDE:Q6NYE2
Ensembl:ENSDART00000010647 GeneID:406455 KEGG:dre:406455 CTD:55920
HOGENOM:HOG000232061 HOVERGEN:HBG080538 InParanoid:Q6NYE2
OMA:FGENKLG OrthoDB:EOG4DNF4B NextBio:20818048 ArrayExpress:Q6NYE2
Bgee:Q6NYE2 Uniprot:Q6NYE2
Length = 495
Score = 270 (100.1 bits), Expect = 5.6e-22, P = 5.6e-22
Identities = 66/200 (33%), Positives = 107/200 (53%)
Query: 181 QVKLIAVG--AFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIA 238
QV + G A H+L + +G LW+WG N+ GQLG GDT+ P ++GL +V A
Sbjct: 122 QVSCVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAA 181
Query: 239 AGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHS 298
G H+ ALT++G VY +G + G+LG G N + + P + G+ IV+V+CG S
Sbjct: 182 CGRNHTLALTENGTVYTFGENKLGQLGQG-NQTDAVLSPATIQY-NGQPIVKVACGAEFS 239
Query: 299 VALTRDGHIFSFGRGDHGRLGY---GRKVTTGQPMEVPINIPAPRNAGDGVDR------- 348
+ + G+++SFG ++G+LG+ G+ + Q +E + PR +++
Sbjct: 240 MIVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCEL-IPRRVAIFIEKTKDGQVL 298
Query: 349 ---RWIAKLVACGGRHTLAI 365
+A+ VACG HTL +
Sbjct: 299 PVPNVVARDVACGANHTLVL 318
Score = 215 (80.7 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 57/192 (29%), Positives = 96/192 (50%)
Query: 92 QGRAYAWGGNEYGQCGEEPERKDDTG-RILRRDIVIPQR--CAPKLIVRQVAAG--GTHS 146
+G+ +G + G + K R L +++ P R C + V V +G HS
Sbjct: 76 KGQLLIFGATNWDLIGRKEVPKQQAAFRNLGQNLWGPHRYGCLSDVQVSCVVSGPCAAHS 135
Query: 147 VVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGLEQVKLIAV--GAFHNLALQEDGA 200
+++T EG +W+WG+ GD K++ P ++GL + ++A G H LAL E+G
Sbjct: 136 LIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTENGT 195
Query: 201 LWAWGNNEYGQLGTGD-TQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRG 259
++ +G N+ GQLG G+ T P +Q +G +V +A G S + G +Y +G
Sbjct: 196 VYTFGENKLGQLGQGNQTDAVLSPATIQ-YNGQPIVKVACGAEFSMIVDCKGNLYSFGCP 254
Query: 260 EHGRLGFGDNDK 271
E+G+LG + K
Sbjct: 255 EYGQLGHNSDGK 266
Score = 148 (57.2 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 53/181 (29%), Positives = 74/181 (40%)
Query: 132 PKLIVRQVAAGGTHSVVLTREGHVWTWG----QPWPPGDIKQISVPVRVQGLE----QVK 183
P ++ R VA G H++VL + V++WG + K VP V+ +
Sbjct: 301 PNVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGAT 360
Query: 184 LIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWH 243
I G + AL E G L+ WG + T P VQ L G + +A G
Sbjct: 361 QIYCGYQCSFALSEMGGLFFWGVTNTSREST------MYPKAVQDLCGWKIRSLACGKSS 414
Query: 244 STALTDDGEVYGWGRGE-HGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALT 302
DD + WG G LG+GDN S Q+V L G QV G +HS+ +
Sbjct: 415 IIVAADDSTI-SWGPSPTFGELGYGDNKPKSSTTAQEVKTLDGVYSEQVVMGYSHSLVIA 473
Query: 303 R 303
R
Sbjct: 474 R 474
Score = 147 (56.8 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 64/247 (25%), Positives = 109/247 (44%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKTENIP 65
++ ++G E GQLG +N + +++ + +E + + +AI + KTK
Sbjct: 247 NLYSFGCPEYGQLG--HNSDGKFIARAQRIE-FDCELIP----RRVAIFIE-KTKD---- 294
Query: 66 SQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIV 125
QV + N A G H L +D Q R ++WG YG+ G E+KD+ L +
Sbjct: 295 GQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHA-EQKDEMVPRLVKLFD 353
Query: 126 IPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGL--EQVK 183
P R A Q+ G S L+ G ++ WG + P VQ L +++
Sbjct: 354 FPGRGAT-----QIYCGYQCSFALSEMGGLFFWGVTNTSRE--STMYPKAVQDLCGWKIR 406
Query: 184 LIAVGAFHNLALQEDGALWAWGNNE-YGQLGTGDTQPRSQPIP--VQGLSGLTLVDIAAG 240
+A G + +D + +WG + +G+LG GD +P+S V+ L G+ + G
Sbjct: 407 SLACGKSSIIVAADDSTI-SWGPSPTFGELGYGDNKPKSSTTAQEVKTLDGVYSEQVVMG 465
Query: 241 GWHSTAL 247
HS +
Sbjct: 466 YSHSLVI 472
Score = 138 (53.6 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 50/184 (27%), Positives = 82/184 (44%)
Query: 9 AWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKT--ENIPS 66
+WG + GQLG G+ + E +++ L + + G ++LA+ ++G T EN
Sbjct: 146 SWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTENGTVYTFGENKLG 205
Query: 67 QVNALSNTK--------------IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPER 112
Q+ + T IV+ A G + VD +G Y++G EYGQ G +
Sbjct: 206 QLGQGNQTDAVLSPATIQYNGQPIVKVACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDG 265
Query: 113 KDDTGRILRRDI---VIPQRCA--------------PKLIVRQVAAGGTHSVVLTREGHV 155
K R R + +IP+R A P ++ R VA G H++VL + V
Sbjct: 266 KF-IARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVACGANHTLVLDSQKRV 324
Query: 156 WTWG 159
++WG
Sbjct: 325 FSWG 328
Score = 137 (53.3 bits), Expect = 4.1e-16, Sum P(2) = 4.1e-16
Identities = 54/197 (27%), Positives = 83/197 (42%)
Query: 185 IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQP--IPVQGLSGLTLVDIAAGGW 242
+A GA H L L +++WG YG+LG + + P + + G I G
Sbjct: 308 VACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYCGYQ 367
Query: 243 HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALT 302
S AL++ G ++ WG + + S M P+ V L G I ++CG + S+ +
Sbjct: 368 CSFALSEMGGLFFWG--------VTNTSRESTMYPKAVQDLCGWKIRSLACGKS-SIIVA 418
Query: 303 RDGHIFSFGRGD-HGRLGYG----RKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVAC 357
D S+G G LGYG + TT Q ++ DGV ++ V
Sbjct: 419 ADDSTISWGPSPTFGELGYGDNKPKSSTTAQEVKTL----------DGV----YSEQVVM 464
Query: 358 GGRHTLAIVEWQTEESK 374
G H+L I TE+ K
Sbjct: 465 GYSHSLVIARQDTEQEK 481
Score = 133 (51.9 bits), Expect = 9.7e-10, Sum P(2) = 9.7e-10
Identities = 46/159 (28%), Positives = 77/159 (48%)
Query: 65 PSQVNALSNTKIVQAAIG--GWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRR 122
P + LS+ ++ G H L + +G+ ++WG N+ GQ G DT R+
Sbjct: 112 PHRYGCLSDVQVSCVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGH-----GDTKRLEAP 166
Query: 123 DIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQ------ISVPVRV 176
++ + ++IV A G H++ LT G V+T+G+ G + Q + P +
Sbjct: 167 KLI--EGLGEEVIVA-AACGRNHTLALTENGTVYTFGEN-KLGQLGQGNQTDAVLSPATI 222
Query: 177 Q--GLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLG 213
Q G VK +A GA ++ + G L+++G EYGQLG
Sbjct: 223 QYNGQPIVK-VACGAEFSMIVDCKGNLYSFGCPEYGQLG 260
Score = 119 (46.9 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 28/78 (35%), Positives = 40/78 (51%)
Query: 236 DIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLL--AGEDIVQVSC 293
D+A G H+ L V+ WG G +GRLG + + +MVP+ V L G Q+ C
Sbjct: 307 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAE--QKDEMVPRLVKLFDFPGRGATQIYC 364
Query: 294 GGTHSVALTRDGHIFSFG 311
G S AL+ G +F +G
Sbjct: 365 GYQCSFALSEMGGLFFWG 382
Score = 111 (44.1 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 35/114 (30%), Positives = 53/114 (46%)
Query: 48 RNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 107
RN G TK P + L IV AA G H LA+ + G Y +G N+ GQ G
Sbjct: 149 RNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTENGTVYTFGENKLGQLG 208
Query: 108 EEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP 161
+ + T +L I P IV+ VA G S+++ +G+++++G P
Sbjct: 209 QG----NQTDAVLS-PATIQYNGQP--IVK-VACGAEFSMIVDCKGNLYSFGCP 254
Score = 81 (33.6 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 18/58 (31%), Positives = 33/58 (56%)
Query: 266 FGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRK 323
F + K +++P N++A + V+CG H++ L +FS+G G +GRLG+ +
Sbjct: 288 FIEKTKDGQVLPVP-NVVARD----VACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQ 340
Score = 38 (18.4 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 6 SIIAWGSGEDGQLGIGNNEE 25
++ +G + GQLG GN +
Sbjct: 195 TVYTFGENKLGQLGQGNQTD 214
>MGI|MGI:2137600 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region
16 homolog (human)" species:10090 "Mus musculus" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=NAS]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0050790 "regulation
of catalytic activity" evidence=NAS] MGI:MGI:2137600
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104312 CTD:81554 HOGENOM:HOG000232125
HOVERGEN:HBG054246 OMA:MVTLAKS OrthoDB:EOG4F1X33 EMBL:AK017733
EMBL:BC024714 EMBL:BC055335 IPI:IPI00111460 RefSeq:NP_291050.1
UniGene:Mm.29508 ProteinModelPortal:Q9CYF5 SMR:Q9CYF5 STRING:Q9CYF5
PhosphoSite:Q9CYF5 PRIDE:Q9CYF5 Ensembl:ENSMUST00000076228
GeneID:94254 KEGG:mmu:94254 InParanoid:Q9CYF5 NextBio:352275
Bgee:Q9CYF5 Genevestigator:Q9CYF5 GermOnline:ENSMUSG00000061979
Uniprot:Q9CYF5
Length = 461
Score = 268 (99.4 bits), Expect = 8.6e-22, P = 8.6e-22
Identities = 96/307 (31%), Positives = 141/307 (45%)
Query: 64 IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE---EPERKDDTGRIL 120
+P ++ TK++Q + G H L + D+ ++ G N +GQCG E E ++ ++
Sbjct: 161 VPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSESHKVH 220
Query: 121 RRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWT--WGQPWPPG--DIKQISVPVRV 176
R Q V QV G HS+ LT +G V++ WG G S P ++
Sbjct: 221 RMQDFDGQ-------VVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKL 273
Query: 177 QG-LEQVKLIAVGAFHN--LALQEDGALWAWGNNEYGQLG--TGDTQ---PRSQPIPVQG 228
G L V ++ V + + LAL DG ++ WGN+EY QL T TQ PR +P G
Sbjct: 274 GGDLAGVTVVQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRC--LPFSG 331
Query: 229 LSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSS---KMVPQKV-NLLA 284
+ + +A GG L +G V+ WG +G LG G + +M+P + L
Sbjct: 332 VGKVK--QVACGGTGCAVLNAEGHVFVWG---YGILGKGPKLLETAIPEMIPPTLFGLTE 386
Query: 285 GEDIVQVS---CGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPA-PR 340
VQVS CG +H ALT G +F +G+ G LG GR P V +P P
Sbjct: 387 FNPEVQVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRV--TMPGEPV 444
Query: 341 NAGDGVD 347
+ GVD
Sbjct: 445 DVACGVD 451
Score = 239 (89.2 bits), Expect = 7.1e-18, P = 7.1e-18
Identities = 92/279 (32%), Positives = 134/279 (48%)
Query: 75 KIVQAAIG-GWHCLAVDDQGRAYAWG-G-NEYGQCGEEPERKDDT-GR--ILRRDIV-IP 127
KI AA G G+ L+ + WG G N+ Q G RKD T G +L V +P
Sbjct: 105 KISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLP 164
Query: 128 QRCAPKLIVRQVAAGGTHSVVLT-REGHVWTWG--------QPWPPGDIKQISVPV-RVQ 177
+ V QV+ G HS+VLT REG V++ G + ++ S V R+Q
Sbjct: 165 LDRPQETKVLQVSCGRAHSLVLTDREG-VFSMGNNSHGQCGRKVVEDEVYSESHKVHRMQ 223
Query: 178 GLE-QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQG-LSGLTLV 235
+ QV + G H+L L + G +++ G GQ G G S P + G L+G+T+V
Sbjct: 224 DFDGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGVTVV 283
Query: 236 DIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGG 295
+A G AL+ DG V+GWG E+ +L D + VP+ + + QV+CGG
Sbjct: 284 QVATYGDCCLALSADGGVFGWGNSEYLQLA-SVTDSTQVNVPRCLPFSGVGKVKQVACGG 342
Query: 296 THSVALTRDGHIFSFGRGDHGRLGYGRKVT-TGQPMEVP 333
T L +GH+F +G +G LG G K+ T P +P
Sbjct: 343 TGCAVLNAEGHVFVWG---YGILGKGPKLLETAIPEMIP 378
Score = 187 (70.9 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 74/245 (30%), Positives = 108/245 (44%)
Query: 75 KIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKL 134
++VQ G H L + D+G Y+ G GQ G T L D+ +
Sbjct: 228 QVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLA-------GV 280
Query: 135 IVRQVAAGGTHSVVLTREGHVWTWG-----QPWPPGDIKQISVP--VRVQGLEQVKLIAV 187
V QVA G + L+ +G V+ WG Q D Q++VP + G+ +VK +A
Sbjct: 281 TVVQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQVAC 340
Query: 188 GAFHNLALQEDGALWAWGNNEYGQLGTG----DTQ-PRSQPIPVQGLSGLT----LVDIA 238
G L +G ++ WG YG LG G +T P P + GL+ + I
Sbjct: 341 GGTGCAVLNAEGHVFVWG---YGILGKGPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIR 397
Query: 239 AGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHS 298
G H ALT+ GE++ WG+ G LG G + + P +V + GE V V+CG H
Sbjct: 398 CGLSHFAALTNKGELFVWGKNIRGCLGIGRLE--DQYFPWRVTM-PGEP-VDVACGVDHM 453
Query: 299 VALTR 303
V L +
Sbjct: 454 VTLAK 458
Score = 37 (18.1 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 14/56 (25%), Positives = 26/56 (46%)
Query: 7 IIAWGSGEDGQLG--IGNNEEREWVCVVKALEPY--KVRSVVAGSRNSLAICDDGK 58
+ + G+ GQ G + +E V ++ + +V VV G +SL + D G+
Sbjct: 192 VFSMGNNSHGQCGRKVVEDEVYSESHKVHRMQDFDGQVVQVVCGQDHSLFLTDKGE 247
>UNIPROTKB|F1MDF3 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:DAAA02005594
EMBL:DAAA02005595 EMBL:DAAA02005596 IPI:IPI00905690
Ensembl:ENSBTAT00000060956 Uniprot:F1MDF3
Length = 1661
Score = 191 (72.3 bits), Expect = 8.7e-22, Sum P(2) = 8.7e-22
Identities = 44/118 (37%), Positives = 62/118 (52%)
Query: 201 LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGE 260
+W WG + GQLG GD PR QP+ V+ L G ++ + AGG+HS ALT +VY WG
Sbjct: 532 VWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNT 591
Query: 261 HGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRL 318
G+LG D + VP+ + + + V+ G +S+ L D F G GRL
Sbjct: 592 FGQLGHSDFPTT---VPRLAKVNSENGVWSVAAGQDYSLFLV-DTEDFQPGLCYSGRL 645
Score = 165 (63.1 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 65/219 (29%), Positives = 104/219 (47%)
Query: 162 WPPGDIKQISVPVRVQGL--EQVKLIAVGAFHNLALQE-----DGALWAWGNNEYGQLGT 214
W G P R+ G + V A+G H + L E DG ++++G + +
Sbjct: 23 WQAGSCSV--TPERLPGWGGKTVLHAALGVKHGVLLTEVFKPSDGEVYSFGTLPW-RSEP 79
Query: 215 GDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSK 274
+T P S PI L G +V +A G +H+ A+TD G VY WG G+ + +
Sbjct: 80 AETCP-SNPILESALVGQYVVTVATGSFHTGAVTDSGVVYMWGENSAGQCAVANQPYVPE 138
Query: 275 MVPQKVN------LLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQ 328
P ++ LLA I+Q++CG H++AL+ I+++G G +LG +TT
Sbjct: 139 PNPVSISDSETSPLLAVR-ILQLACGEEHTLALSLSREIWAWGTGC--QLGL---ITTTF 192
Query: 329 PMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
P+ P + AG R + + VACG H+LA+V+
Sbjct: 193 PVTKPQKVE--HLAG-----RVVLQ-VACGAFHSLALVQ 223
Score = 147 (56.8 bits), Expect = 8.7e-22, Sum P(2) = 8.7e-22
Identities = 47/140 (33%), Positives = 66/140 (47%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG--EEPERKDDTGRILRR 122
P +AL +V A G +H AV D G Y WG N GQC +P + +
Sbjct: 87 PILESALVGQYVVTVATGSFHTGAVTDSGVVYMWGENSAGQCAVANQPY-VPEPNPVSIS 145
Query: 123 DIVIPQRCAPKLIVR--QVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQ---ISVPVRVQ 177
D +P L VR Q+A G H++ L+ +W WG G I ++ P +V+
Sbjct: 146 D----SETSPLLAVRILQLACGEEHTLALSLSREIWAWGTGCQLGLITTTFPVTKPQKVE 201
Query: 178 GLE-QVKL-IAVGAFHNLAL 195
L +V L +A GAFH+LAL
Sbjct: 202 HLAGRVVLQVACGAFHSLAL 221
Score = 143 (55.4 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 42/121 (34%), Positives = 67/121 (55%)
Query: 252 EVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFG 311
EV+ WG+G+ G+LG GD ++ P V L G++++ + GG HS+ALT ++S+G
Sbjct: 531 EVWTWGKGKEGQLGHGD--VLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWG 588
Query: 312 RGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVEWQTE 371
G+LG+ TT VP + A N+ +GV W VA G ++L +V+ TE
Sbjct: 589 SNTFGQLGHSDFPTT-----VP-RL-AKVNSENGV---WS---VAAGQDYSLFLVD--TE 633
Query: 372 E 372
+
Sbjct: 634 D 634
Score = 127 (49.8 bits), Expect = 0.00023, P = 0.00023
Identities = 55/204 (26%), Positives = 96/204 (47%)
Query: 118 RILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVP 173
R+LR+ + R +++ +G +++ + VWTWG+ GD+ P
Sbjct: 498 RLLRKAARVKTRT---VVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQP 554
Query: 174 VRVQGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSG 231
+ V+ L+ ++I + G +H+LAL +++WG+N +GQLG D P + P + S
Sbjct: 555 LCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSDF-PTTVPRLAKVNSE 613
Query: 232 LTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLG--FGDN---DKSSKMVPQKVNLLAGE 286
+ +AAG +S L D E + G GRL GDN + S +P ++
Sbjct: 614 NGVWSVAAGQDYSLFLVDT-EDFQPGLCYSGRLDPTEGDNLPENHSGTKMPVLLSCSKLG 672
Query: 287 DIVQVSCGGTHSVALTRDGHIFSF 310
I +V+ G +AL D +I +
Sbjct: 673 YISRVTAGKDSYLALV-DKNIMGY 695
Score = 56 (24.8 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 24/87 (27%), Positives = 40/87 (45%)
Query: 66 SQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWG-GNEYGQCGEEPERKDDTGRILRRDI 124
S+ + L +I+Q A G H LA+ +AWG G + G T + +
Sbjct: 147 SETSPLLAVRILQLACGEEHTLALSLSREIWAWGTGCQLGLI-------TTTFPVTKPQK 199
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTR 151
V + A ++++ QVA G HS+ L +
Sbjct: 200 V--EHLAGRVVL-QVACGAFHSLALVQ 223
>UNIPROTKB|F1RJL0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 OMA:MVTLAKS
EMBL:FP326664 RefSeq:XP_003354559.2 Ensembl:ENSSSCT00000008468
GeneID:100513850 KEGG:ssc:100513850 Uniprot:F1RJL0
Length = 470
Score = 268 (99.4 bits), Expect = 9.3e-22, P = 9.3e-22
Identities = 100/308 (32%), Positives = 143/308 (46%)
Query: 64 IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE---EPERKDDTGRIL 120
+P ++ T+++Q + G H L + D ++ G N YGQCG E E ++ ++
Sbjct: 170 VPLPLHRPQETQVLQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHKVH 229
Query: 121 RRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWT--WGQPWPPG--DIKQISVPVRV 176
R Q V QVA G HS+ LT +G V++ WG G S P ++
Sbjct: 230 RMQDFDGQ-------VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSAPTKL 282
Query: 177 QG-LEQVKLIAVGAFHN--LALQEDGALWAWGNNEYGQLG--TGDTQ---PRSQPIPVQG 228
G L V ++ V + + LA+ DG+L+ WGN+EY QL T TQ PR P
Sbjct: 283 GGDLAGVNVVQVATYGDCCLAVSADGSLFGWGNSEYLQLASVTDSTQVNVPRCLPF---- 338
Query: 229 LSGLTLVDIAA-GGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSS---KMVPQKV-NLL 283
SG+ V AA GG L +G V+ WG +G LG G N + +M+P + L
Sbjct: 339 -SGVGQVKQAACGGTGCAVLNGEGHVFVWG---YGILGKGPNLVETALPEMIPPTLFGLT 394
Query: 284 AGEDIVQVS---CGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPA-P 339
V+VS CG +H ALT G +F +G+ G LG GR P V +P P
Sbjct: 395 ELNPEVRVSRIRCGLSHFAALTDRGELFVWGKNIRGCLGIGRLEDQYFPWRV--TMPGEP 452
Query: 340 RNAGDGVD 347
+ GVD
Sbjct: 453 VDVACGVD 460
Score = 228 (85.3 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 87/278 (31%), Positives = 129/278 (46%)
Query: 75 KIVQAAIG-GWHCLAVDDQGRAYAWG-G-NEYGQCGEEPERKDDT-GR--ILRRDIV-IP 127
KI AA G G+ L+ + WG G N+ Q G RKD T G +L V +P
Sbjct: 114 KISSAACGYGFTLLSSKTRDVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLP 173
Query: 128 QRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG--------QPWPPGDIKQISVPV-RVQG 178
+ V QV+ G HS+VLT V++ G + +I S V R+Q
Sbjct: 174 LHRPQETQVLQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHKVHRMQD 233
Query: 179 LE-QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQG-LSGLTLVD 236
+ QV +A G H+L L + G +++ G GQ G G S P + G L+G+ +V
Sbjct: 234 FDGQVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSAPTKLGGDLAGVNVVQ 293
Query: 237 IAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGT 296
+A G A++ DG ++GWG E+ +L D + VP+ + + Q +CGGT
Sbjct: 294 VATYGDCCLAVSADGSLFGWGNSEYLQLA-SVTDSTQVNVPRCLPFSGVGQVKQAACGGT 352
Query: 297 HSVALTRDGHIFSFGRGDHGRLGYGRK-VTTGQPMEVP 333
L +GH+F +G +G LG G V T P +P
Sbjct: 353 GCAVLNGEGHVFVWG---YGILGKGPNLVETALPEMIP 387
Score = 184 (69.8 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 75/245 (30%), Positives = 108/245 (44%)
Query: 75 KIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKL 134
++VQ A G H L + D+G Y+ G GQ G L D+ +
Sbjct: 237 QVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSAPTKLGGDLA-------GV 289
Query: 135 IVRQVAAGGTHSVVLTREGHVWTWG-----QPWPPGDIKQISVP--VRVQGLEQVKLIAV 187
V QVA G + ++ +G ++ WG Q D Q++VP + G+ QVK A
Sbjct: 290 NVVQVATYGDCCLAVSADGSLFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGQVKQAAC 349
Query: 188 GAFHNLALQEDGALWAWGNNEYGQLGTG----DTQ-PRSQPIPVQGLSGLT----LVDIA 238
G L +G ++ WG YG LG G +T P P + GL+ L + I
Sbjct: 350 GGTGCAVLNGEGHVFVWG---YGILGKGPNLVETALPEMIPPTLFGLTELNPEVRVSRIR 406
Query: 239 AGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHS 298
G H ALTD GE++ WG+ G LG G + + P +V + GE V V+CG H
Sbjct: 407 CGLSHFAALTDRGELFVWGKNIRGCLGIGRLE--DQYFPWRVTM-PGEP-VDVACGVDHM 462
Query: 299 VALTR 303
V L +
Sbjct: 463 VTLAK 467
>TAIR|locus:2025277 [details] [associations]
symbol:PRAF1 "AT1G76950" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 HSSP:Q15075 EMBL:AF323270 IPI:IPI00521580
RefSeq:NP_565144.1 UniGene:At.19186 ProteinModelPortal:Q947D2
SMR:Q947D2 PRIDE:Q947D2 EnsemblPlants:AT1G76950.1 GeneID:844030
KEGG:ath:AT1G76950 TAIR:At1g76950 InParanoid:Q947D2 OMA:WIPKRIA
PhylomeDB:Q947D2 ProtClustDB:CLSN2686442 Genevestigator:Q947D2
Uniprot:Q947D2
Length = 1103
Score = 270 (100.1 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 97/321 (30%), Positives = 144/321 (44%)
Query: 65 PSQVNALSNTKIVQ-AAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRD 123
P V +L+ T V A G +H AV G Y WG + G D + I +R
Sbjct: 324 PRLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHN-VGLLGHGSDISHWIPKR- 381
Query: 124 IVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPW----PPGDIKQISVPVRVQGL 179
I L V V+ G H+ ++T G ++T+G GD + + P V+ L
Sbjct: 382 IA---GSLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESL 438
Query: 180 EQVKLIAV--GAFHNLALQE------------DGALWAWGNNEYGQLGTGDTQPRSQPIP 225
++ IAV G +H A+ E G L+ WG+ + +LG GD PR +P
Sbjct: 439 SGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTC 498
Query: 226 VQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDND-KSSKMVPQKVNLLA 284
V L IA G + LT G+V+ G +G+LG D K +V K LA
Sbjct: 499 VPALIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDK---LA 555
Query: 285 GEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGD 344
E + ++SCG H ALT ++++G+G +GRLG+G + +VP + A +
Sbjct: 556 SEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDL----EDRKVPTIVEALK---- 607
Query: 345 GVDRRWIAKLVACGGRHTLAI 365
DR K +ACG +T AI
Sbjct: 608 --DRH--VKYIACGSNYTAAI 624
Score = 255 (94.8 bits), Expect = 4.5e-19, P = 4.5e-19
Identities = 74/257 (28%), Positives = 121/257 (47%)
Query: 62 ENIPSQVNALSNTKI-VQAA-IGGWHCLAVDDQ---GRAYAWGGNEYGQCGEEPERKDDT 116
+N+ ++V+ ++ V +A H A DD G Y WG + K+ +
Sbjct: 202 KNMQTKVSGSDGFRVSVSSAQSSSSHGSAADDSDALGDVYIWGEVICDNVVKVGIDKNAS 261
Query: 117 GRILRRDIVIPQRCAPKLI--VRQVAAGGTHSVVLTREGHVWTWGQP----WPPGDIKQI 170
R D+++P+ ++ V Q+A G H+ +TR+G ++TWG+ G K +
Sbjct: 262 YLTTRTDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDV 321
Query: 171 SVPVRVQGL---EQVKLIAVGAFHNLALQEDGALWAWGNNEY--GQLGTGDTQPRSQPIP 225
P V+ L V +A G FH A+ G L+ WG+ + G LG G P
Sbjct: 322 FHPRLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKR 381
Query: 226 VQG-LSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLA 284
+ G L GL + ++ G WH+ +T G ++ +G G G LG GD K + P++V L+
Sbjct: 382 IAGSLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGD--KETVQYPREVESLS 439
Query: 285 GEDIVQVSCGGTHSVAL 301
G + VSCG H+ A+
Sbjct: 440 GLRTIAVSCGVWHTAAV 456
Score = 248 (92.4 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 69/190 (36%), Positives = 97/190 (51%)
Query: 182 VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVD-IAAG 240
V IA G H + G ++ WG G+LG G + P V+ L+ + VD +A G
Sbjct: 283 VHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACG 342
Query: 241 GWHSTALTDDGEVYGWGRGEH--GRLGFGDNDKSSKMVPQKV-NLLAGEDIVQVSCGGTH 297
+H+ A+T GE+Y WG G H G LG G + S +P+++ L G + VSCG H
Sbjct: 343 EFHTCAVTLAGELYTWGDGTHNVGLLGHGSD--ISHWIPKRIAGSLEGLHVASVSCGPWH 400
Query: 298 SVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVAC 357
+ +T G +F+FG G G LG+G K T P EV + G+ R IA V+C
Sbjct: 401 TALITSYGRLFTFGDGTFGVLGHGDKETVQYPREV--------ESLSGL--RTIA--VSC 448
Query: 358 GGRHTLAIVE 367
G HT A+VE
Sbjct: 449 GVWHTAAVVE 458
Score = 207 (77.9 bits), Expect = 5.9e-13, Sum P(2) = 5.9e-13
Identities = 65/268 (24%), Positives = 111/268 (41%)
Query: 46 GSRNSLAICDDGKTKTENIPSQV-NALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYG 104
G+ N + + G + IP ++ +L + + G WH + GR + +G +G
Sbjct: 361 GTHN-VGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFG 419
Query: 105 QCGEEPERKDDTGRILR-----RDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG 159
G + R + R I + V ++ ++S ++ G ++TWG
Sbjct: 420 VLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVS-SGKLFTWG 478
Query: 160 QP----WPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLA--LQEDGALWAWGNNEYGQLG 213
GD P V L + H+L L G ++ G+ YGQLG
Sbjct: 479 DGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLG 538
Query: 214 TGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSS 273
T + + L+ + +I+ G +H ALT EVY WG+G +GRLG GD +
Sbjct: 539 NLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLE--D 596
Query: 274 KMVPQKVNLLAGEDIVQVSCGGTHSVAL 301
+ VP V L + ++CG ++ A+
Sbjct: 597 RKVPTIVEALKDRHVKYIACGSNYTAAI 624
Score = 143 (55.4 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 45/149 (30%), Positives = 69/149 (46%)
Query: 223 PIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNL 282
P P++ L + IA G H+ +T GE++ WG GRLG G P+ V
Sbjct: 272 PKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIG--KDVFHPRLVES 329
Query: 283 LAGEDIVQ-VSCGGTHSVALTRDGHIFSFGRGDH--GRLGYGRKVTTGQPMEVPINIPAP 339
L V V+CG H+ A+T G ++++G G H G LG+G ++ P +
Sbjct: 330 LTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRI------- 382
Query: 340 RNAGDGVDRRWIAKLVACGGRHTLAIVEW 368
AG ++ +A V+CG HT I +
Sbjct: 383 --AGS-LEGLHVAS-VSCGPWHTALITSY 407
Score = 40 (19.1 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 15/56 (26%), Positives = 25/56 (44%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYK-VRSVVAGSRNSLAICDDGKTKT 61
I WG G+LG G ++ +V++L V V G ++ A+ G+ T
Sbjct: 302 IFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFHTCAVTLAGELYT 357
>UNIPROTKB|Q9P258 [details] [associations]
symbol:RCC2 "Protein RCC2" species:9606 "Homo sapiens"
[GO:0005874 "microtubule" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005819
"spindle" evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 Reactome:REACT_115566 Reactome:REACT_21300
GO:GO:0000775 GO:GO:0005730 GO:GO:0051301 GO:GO:0005819
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005874
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0000236 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AJ421269
EMBL:AB040903 EMBL:BC004933 EMBL:BC042141 EMBL:BC053908
EMBL:AL359612 IPI:IPI00465044 PIR:T50630 RefSeq:NP_001129676.1
RefSeq:NP_061185.1 UniGene:Hs.380857 ProteinModelPortal:Q9P258
SMR:Q9P258 IntAct:Q9P258 STRING:Q9P258 PhosphoSite:Q9P258
DMDM:71152033 SWISS-2DPAGE:Q9P258 PaxDb:Q9P258 PeptideAtlas:Q9P258
PRIDE:Q9P258 Ensembl:ENST00000375433 Ensembl:ENST00000375436
GeneID:55920 KEGG:hsa:55920 UCSC:uc001bal.3 GeneCards:GC01M017733
HGNC:HGNC:30297 MIM:609587 neXtProt:NX_Q9P258 PharmGKB:PA142671091
InParanoid:Q9P258 GenomeRNAi:55920 NextBio:61323 Bgee:Q9P258
CleanEx:HS_RCC2 Genevestigator:Q9P258 GermOnline:ENSG00000179051
Uniprot:Q9P258
Length = 522
Score = 268 (99.4 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 63/200 (31%), Positives = 107/200 (53%)
Query: 181 QVKLIAVG--AFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIA 238
+V+ + G A H+L + +G LW+WG NE GQLG GDT+ P ++GLS +V A
Sbjct: 149 RVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAA 208
Query: 239 AGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHS 298
G H+ ALT+ G V+ +G + G+LG G N + P ++ + G+ I +++CG S
Sbjct: 209 CGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQI-MYNGQPITKMACGAEFS 266
Query: 299 VALTRDGHIFSFGRGDHGRLGY---GRKVTTGQPMEVPINIPAPRNAGDGVDR------- 348
+ + G+++SFG ++G+LG+ G+ + Q +E + PR +++
Sbjct: 267 MIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCEL-VPRRVAIFIEKTKDGQIL 325
Query: 349 ---RWIAKLVACGGRHTLAI 365
+ + VACG HTL +
Sbjct: 326 PVPNVVVRDVACGANHTLVL 345
Score = 221 (82.9 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 59/192 (30%), Positives = 98/192 (51%)
Query: 92 QGRAYAWGGNEYGQCGEEPERKDDTG-RILRRDIVIPQR--CAPKLIVRQVAAGG--THS 146
+G+ +G + G + K R L +++ P R C + VR V +G HS
Sbjct: 103 KGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHS 162
Query: 147 VVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGLEQVKLI--AVGAFHNLALQEDGA 200
+++T EG +W+WG+ GD K++ P ++GL ++ A G H LAL E G+
Sbjct: 163 LLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 222
Query: 201 LWAWGNNEYGQLGTGDTQPRSQPIPVQGL-SGLTLVDIAAGGWHSTALTDDGEVYGWGRG 259
++A+G N+ GQLG G+ Q + P P Q + +G + +A G S + G +Y +G
Sbjct: 223 VFAFGENKMGQLGLGN-QTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCP 281
Query: 260 EHGRLGFGDNDK 271
E+G+LG + K
Sbjct: 282 EYGQLGHNSDGK 293
Score = 179 (68.1 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 37/110 (33%), Positives = 61/110 (55%)
Query: 229 LSGLTLVDIAAGGW--HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGE 286
L+G+ + + +G HS +T +G+++ WGR E G+LG GD + P+ + L+ E
Sbjct: 145 LAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVE--APRLIEGLSHE 202
Query: 287 DIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKV-TTGQPMEVPIN 335
IV +CG H++ALT G +F+FG G+LG G + P ++ N
Sbjct: 203 VIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYN 252
Score = 167 (63.8 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 68/250 (27%), Positives = 115/250 (46%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKTENIP 65
++ ++G E GQLG +N + +++ + +E Y V +AI + KTK
Sbjct: 274 NLYSFGCPEYGQLG--HNSDGKFIARAQRIE-YDCELVP----RRVAIFIE-KTKD---- 321
Query: 66 SQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIV 125
Q+ + N + A G H L +D Q R ++WG YG+ G E+KD+ L +
Sbjct: 322 GQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHA-EQKDEMVPRLVKLFD 380
Query: 126 IPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGL--EQVK 183
P R A Q+ AG T S ++ G ++ WG + P VQ L +++
Sbjct: 381 FPGRGAS-----QIYAGYTCSFAVSEVGGLFFWGATNTSRE--STMYPKAVQDLCGWRIR 433
Query: 184 LIAVGAFHNLALQEDGALWAWGNNE-YGQLGTGDTQPRSQPIP--VQGLSGLTLVDIAAG 240
+A G ++ + D + +WG + +G+LG GD +P+S V+ L G+ +A G
Sbjct: 434 SLACGK-SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMG 492
Query: 241 GWHSTALTDD 250
HS + D
Sbjct: 493 YSHSLVIARD 502
Score = 159 (61.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 67/267 (25%), Positives = 115/267 (43%)
Query: 9 AWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKT--------- 59
+WG E GQLG G+ + E +++ L + S G ++LA+ + G
Sbjct: 173 SWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMG 232
Query: 60 ------KTENIPSQVNALSNTK-IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPER 112
+T+ +PS + N + I + A G + +D +G Y++G EYGQ G +
Sbjct: 233 QLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSD- 291
Query: 113 KDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISV 172
G+ + R I C +L+ R+VA + T++G + + V
Sbjct: 292 ----GKFIARAQRIEYDC--ELVPRRVAI----FIEKTKDGQI--------------LPV 327
Query: 173 PVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQP--IPVQGLS 230
P V V+ +A GA H L L +++WG YG+LG + + P + +
Sbjct: 328 PNVV-----VRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFP 382
Query: 231 GLTLVDIAAGGWHSTALTDDGEVYGWG 257
G I AG S A+++ G ++ WG
Sbjct: 383 GRGASQIYAGYTCSFAVSEVGGLFFWG 409
Score = 153 (58.9 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 53/182 (29%), Positives = 77/182 (42%)
Query: 132 PKLIVRQVAAGGTHSVVLTREGHVWTWG----QPWPPGDIKQISVPVRVQGLE----QVK 183
P ++VR VA G H++VL + V++WG + K VP V+ +
Sbjct: 328 PNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGAS 387
Query: 184 LIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWH 243
I G + A+ E G L+ WG + T P VQ L G + +A G
Sbjct: 388 QIYAGYTCSFAVSEVGGLFFWGATNTSREST------MYPKAVQDLCGWRIRSLACGK-S 440
Query: 244 STALTDDGEVYGWGRGE-HGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALT 302
S + D WG G LG+GD+ S Q+V L G QV+ G +HS+ +
Sbjct: 441 SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIA 500
Query: 303 RD 304
RD
Sbjct: 501 RD 502
Score = 131 (51.2 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 56/200 (28%), Positives = 87/200 (43%)
Query: 182 VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQP--IPVQGLSGLTLVDIAA 239
V+ +A GA H L L +++WG YG+LG + + P + + G I A
Sbjct: 332 VRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYA 391
Query: 240 GGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSV 299
G S A+++ G ++ WG R S M P+ V L G I ++CG + S+
Sbjct: 392 GYTCSFAVSEVGGLFFWGATNTSR--------ESTMYPKAVQDLCGWRIRSLACGKS-SI 442
Query: 300 ALTRDGHIFSFGRGD-HGRLGYG--RKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVA 356
+ D S+G G LGYG + ++ EV DG+ ++ VA
Sbjct: 443 IVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEV--------KTLDGI----FSEQVA 490
Query: 357 CGGRHTLAIV--EWQTEESK 374
G H+L I E +TE+ K
Sbjct: 491 MGYSHSLVIARDESETEKEK 510
Score = 125 (49.1 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 41/158 (25%), Positives = 76/158 (48%)
Query: 65 PSQVNALSNTKIVQAAIGGW--HCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRR 122
P + L+ ++ G H L + +G+ ++WG NE GQ G ++ + R++
Sbjct: 139 PHRYGCLAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLI-- 196
Query: 123 DIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI---KQI-SVPVRVQG 178
+ + ++IV A G H++ LT G V+ +G+ G + Q +VP Q
Sbjct: 197 -----EGLSHEVIV-SAACGRNHTLALTETGSVFAFGEN-KMGQLGLGNQTDAVPSPAQI 249
Query: 179 L---EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLG 213
+ + + +A GA ++ + G L+++G EYGQLG
Sbjct: 250 MYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLG 287
Score = 57 (25.1 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEE 25
+ T S+ A+G + GQLG+GN +
Sbjct: 217 LTETGSVFAFGENKMGQLGLGNQTD 241
>UNIPROTKB|F1SI31 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Ensembl:ENSSSCT00000017539 Uniprot:F1SI31
Length = 1644
Score = 229 (85.7 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 60/180 (33%), Positives = 92/180 (51%)
Query: 136 VRQVAAGGTHSVVLTREGHVWTWGQ-PW--PPGDIKQISVPVRVQGL--EQVKLIAVGAF 190
V Q A G H V+LT +G V+++G PW P ++ S P+ L + V +A G+F
Sbjct: 43 VLQAALGVKHGVLLTEDGEVYSFGTLPWRSEPAELCPSS-PILENALVGQYVVTVATGSF 101
Query: 191 HNLALQEDGALWAWGNNEYGQLGTGDTQ--PRSQPIPVQG-----LSGLTLVDIAAGGWH 243
H+ A+ E G ++ WG N GQ + Q P P+ + L + ++ +A G H
Sbjct: 102 HSGAVTESGVVYMWGENSAGQCAVANQQYVPEPNPVSISDSETSPLLAVRILQLACGEEH 161
Query: 244 STALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTR 303
+ AL+ E++ WG G +LG PQKV LAG ++QV+CG HS+AL +
Sbjct: 162 TLALSISREIWAWGTG--CQLGL-ITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQ 218
Score = 187 (70.9 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 43/118 (36%), Positives = 63/118 (53%)
Query: 201 LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGE 260
+W WG + GQLG GD PR QP+ V+ L G ++ + AGG+HS ALT +VY WG
Sbjct: 522 VWTWGKGKDGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNT 581
Query: 261 HGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVAL--TRDGH--IFSFGRGD 314
G+LG D + VP+ + + + V+ G +S+ L T D ++ GR D
Sbjct: 582 FGQLGHSDFPTT---VPRLAKMNSENGVWSVAAGQDYSLFLVDTEDFQPGLYYSGRQD 636
Score = 176 (67.0 bits), Expect = 9.4e-10, P = 9.4e-10
Identities = 64/214 (29%), Positives = 103/214 (48%)
Query: 162 WPPGDIKQISVPVRVQGL--EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQP 219
W G P R+ G + V A+G H + L EDG ++++G + + + P
Sbjct: 23 WQAGSCSV--TPERLPGWTGKTVLQAALGVKHGVLLTEDGEVYSFGTLPW-RSEPAELCP 79
Query: 220 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 279
S PI L G +V +A G +HS A+T+ G VY WG G+ + + P
Sbjct: 80 -SSPILENALVGQYVVTVATGSFHSGAVTESGVVYMWGENSAGQCAVANQQYVPEPNPVS 138
Query: 280 VN------LLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVP 333
++ LLA I+Q++CG H++AL+ I+++G G +LG +TT P+ P
Sbjct: 139 ISDSETSPLLAVR-ILQLACGEEHTLALSISREIWAWGTGC--QLGL---ITTTFPVTKP 192
Query: 334 INIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
+ AG R + + VACG H+LA+V+
Sbjct: 193 QKVE--HLAG-----RVVLQ-VACGAFHSLALVQ 218
Score = 149 (57.5 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 45/138 (32%), Positives = 65/138 (47%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P NAL +V A G +H AV + G Y WG N GQC ++ +
Sbjct: 82 PILENALVGQYVVTVATGSFHSGAVTESGVVYMWGENSAGQCAVANQQYVPEPNPVS--- 138
Query: 125 VIPQRCAPKLIVR--QVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQ---ISVPVRVQGL 179
+ +P L VR Q+A G H++ L+ +W WG G I ++ P +V+ L
Sbjct: 139 ISDSETSPLLAVRILQLACGEEHTLALSISREIWAWGTGCQLGLITTTFPVTKPQKVEHL 198
Query: 180 E-QVKL-IAVGAFHNLAL 195
+V L +A GAFH+LAL
Sbjct: 199 AGRVVLQVACGAFHSLAL 216
Score = 144 (55.7 bits), Expect = 9.9e-17, Sum P(2) = 9.9e-17
Identities = 42/121 (34%), Positives = 67/121 (55%)
Query: 252 EVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFG 311
EV+ WG+G+ G+LG GD ++ P V L G++++ + GG HS+ALT ++S+G
Sbjct: 521 EVWTWGKGKDGQLGHGD--VLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWG 578
Query: 312 RGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVEWQTE 371
G+LG+ TT VP + A N+ +GV W VA G ++L +V+ TE
Sbjct: 579 SNTFGQLGHSDFPTT-----VP-RL-AKMNSENGV---WS---VAAGQDYSLFLVD--TE 623
Query: 372 E 372
+
Sbjct: 624 D 624
Score = 57 (25.1 bits), Expect = 1.7e-11, Sum P(3) = 1.7e-11
Identities = 24/87 (27%), Positives = 40/87 (45%)
Query: 66 SQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWG-GNEYGQCGEEPERKDDTGRILRRDI 124
S+ + L +I+Q A G H LA+ +AWG G + G T + +
Sbjct: 142 SETSPLLAVRILQLACGEEHTLALSISREIWAWGTGCQLGLI-------TTTFPVTKPQK 194
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTR 151
V + A ++++ QVA G HS+ L +
Sbjct: 195 V--EHLAGRVVL-QVACGAFHSLALVQ 218
Score = 37 (18.1 bits), Expect = 1.7e-11, Sum P(3) = 1.7e-11
Identities = 5/18 (27%), Positives = 8/18 (44%)
Query: 7 IIAWGSGEDGQLGIGNNE 24
+ WG GQ + N +
Sbjct: 112 VYMWGENSAGQCAVANQQ 129
>UNIPROTKB|A7Z018 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0051225
"spindle assembly" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031492 "nucleosomal DNA binding" evidence=IEA] [GO:0007090
"regulation of S phase of mitotic cell cycle" evidence=IEA]
[GO:0007088 "regulation of mitosis" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0007052 "mitotic spindle
organization" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0007052
GO:GO:0051225 GO:GO:0000082 GO:GO:0031965 GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0007090 GO:GO:0031492
GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
EMBL:DAAA02006335 EMBL:BC153215 IPI:IPI00868581
RefSeq:NP_001098878.1 UniGene:Bt.54942 SMR:A7Z018 STRING:A7Z018
Ensembl:ENSBTAT00000032060 GeneID:534142 KEGG:bta:534142
InParanoid:A7Z018 OMA:GTESCFV NextBio:20876286 Uniprot:A7Z018
Length = 422
Score = 247 (92.0 bits), Expect = 5.0e-19, P = 5.0e-19
Identities = 85/287 (29%), Positives = 130/287 (45%)
Query: 76 IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLI 135
IVQA GG H + + G+ Y++G N+ G G DT + ++P + +
Sbjct: 69 IVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGR------DTS--VEGSEMVPGKVDLQEK 120
Query: 136 VRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI-------KQISVPVRVQGLEQVKLIAVG 188
V QV+AG +H+ LT +G V+ WG + K+ VPV+VQ V +A G
Sbjct: 121 VIQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLSVPVVKVASG 180
Query: 189 AFHNLALQEDGALWAWGNNEYGQLGT--------GDTQ-------PRSQPIPVQGLSG-L 232
H + L DG L+ G+ E GQLG G Q P+ + +G G +
Sbjct: 181 NDHLVMLTVDGDLYTLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHV 240
Query: 233 TLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAG--EDIVQ 290
D G + + A++ +G VYG+G + +LG + S VPQ + + V
Sbjct: 241 RFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTQGTE--SCFVPQNLTSFKNSTKSWVG 298
Query: 291 VSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIP 337
S G H+V + +G +S GR ++GRLG G + VP IP
Sbjct: 299 FSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGA---EEKSVPTLIP 342
Score = 215 (80.7 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 57/188 (30%), Positives = 96/188 (51%)
Query: 188 GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIA-AGGWHSTA 246
GA+ A+ +G ++ +G + Y QLGT T+ P + T + +GG H T
Sbjct: 248 GAYFTFAISSEGHVYGFGLSNYHQLGTQGTESCFVPQNLTSFKNSTKSWVGFSGGQHHTV 307
Query: 247 LTD-DGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDG 305
D +G+ Y GR E+GRLG G+ + K VP + L + V+CG + A+T+DG
Sbjct: 308 CMDSEGKAYSLGRAEYGRLGLGEGAEE-KSVPTLIPRLP--TVSSVACGASVGYAVTKDG 364
Query: 306 HIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
+F++G G + +LG G+ P+E+ G ++ R + V+ GG+HT+ +
Sbjct: 365 RVFAWGMGTNYQLGTGQDEDAWSPVEM---------TGKQLENR-VVLTVSSGGQHTVLL 414
Query: 366 VEWQTEES 373
V+ E+S
Sbjct: 415 VK-DKEQS 421
Score = 212 (79.7 bits), Expect = 8.7e-15, P = 8.7e-15
Identities = 74/249 (29%), Positives = 119/249 (47%)
Query: 127 PQRCAPKLIVRQVA--AGGTH-SVVLTR-EGHVWTWGQPWPPGDIKQISVPVRVQGLEQV 182
P+ PK +V+ + GT VVLT +G V GQ ++ + P V E +
Sbjct: 13 PEDALPKSKKVKVSHRSHGTEPGVVLTLGQGDV---GQLGLGENVMERKKPALVSIPEDI 69
Query: 183 KLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGW 242
G H + L + G ++++G N+ G LG + S+ +P + ++ ++AG
Sbjct: 70 VQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVDLQEKVIQVSAGDS 129
Query: 243 HSTALTDDGEVYGWG--RGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVA 300
H+ ALT+DG V+ WG R +G +G + K S MVP +V L +V+V+ G H V
Sbjct: 130 HTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKS-MVPVQVQLSV--PVVKVASGNDHLVM 186
Query: 301 LTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGR 360
LT DG +++ G G+ G+LG VP + A R G++R + K V R
Sbjct: 187 LTVDGDLYTLGSGEQGQLG-----------RVP-ELFANRGGRQGLERLLVPKCVMLKSR 234
Query: 361 HTLAIVEWQ 369
+ V +Q
Sbjct: 235 GSRGHVRFQ 243
Score = 205 (77.2 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 75/263 (28%), Positives = 117/263 (44%)
Query: 60 KTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTG-- 117
K +P QV LS +V+ A G H + + G Y G E GQ G PE + G
Sbjct: 160 KKSMVPVQVQ-LS-VPVVKVASGNDHLVMLTVDGDLYTLGSGEQGQLGRVPELFANRGGR 217
Query: 118 ----RILRRDIVIPQRCAPKLIVR-QVAAGGTH-SVVLTREGHVWTWG-----QPWPPGD 166
R+L V+ + + VR Q A G + + ++ EGHV+ +G Q G
Sbjct: 218 QGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTQGT 277
Query: 167 IKQISVPVRVQGLEQVKLIAVG----AFHNLALQEDGALWAWGNNEYGQLGTGD-TQPRS 221
+ VP + + VG H + + +G ++ G EYG+LG G+ + +S
Sbjct: 278 -ESCFVPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKS 336
Query: 222 QPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVN 281
P + L T+ +A G A+T DG V+ WG G + +LG G ++ + V
Sbjct: 337 VPTLIPRLP--TVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGK 394
Query: 282 LLAGEDIVQVSCGGTHSVALTRD 304
L ++ VS GG H+V L +D
Sbjct: 395 QLENRVVLTVSSGGQHTVLLVKD 417
Score = 98 (39.6 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 44/174 (25%), Positives = 77/174 (44%)
Query: 7 IIAWGSGEDGQLGIGNNE-EREWVCVVKALEPYKVRSVVAGSRNSLAI----------CD 55
++ G G+ GQLG+G N ER+ +V P + AG +++ + C+
Sbjct: 37 VLTLGQGDVGQLGLGENVMERKKPALVSI--PEDIVQAEAGGMHTVCLSKSGQVYSFGCN 94
Query: 56 D----GK-TKTENIPSQVNALS-NTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 109
D G+ T E + K++Q + G H A+ + GR + WG
Sbjct: 95 DEGALGRDTSVEGSEMVPGKVDLQEKVIQVSAGDSHTAALTEDGRVFLWGSF-------- 146
Query: 110 PERKDDTGRI--LR--RDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG 159
+D+ G I L + ++P + + V +VA+G H V+LT +G ++T G
Sbjct: 147 ---RDNNGVIGLLEPMKKSMVPVQVQLSVPVVKVASGNDHLVMLTVDGDLYTLG 197
Score = 54 (24.1 bits), Expect = 6.5e-17, Sum P(2) = 6.5e-17
Identities = 14/58 (24%), Positives = 29/58 (50%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK 58
++ + + ++G ++G LG + E + K KV V AG ++ A+ +DG+
Sbjct: 82 LSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVDLQEKVIQVSAGDSHTAALTEDGR 139
Score = 42 (19.8 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 8/9 (88%), Positives = 8/9 (88%)
Query: 11 GSGEDGQLG 19
GSGE GQLG
Sbjct: 197 GSGEQGQLG 205
>UNIPROTKB|E2RSG1 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005622 GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 KO:K04575 OMA:AKPAIDF
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AAEX03018021
RefSeq:XP_003640234.1 Ensembl:ENSCAFT00000019642 GeneID:100856109
KEGG:cfa:100856109 Uniprot:E2RSG1
Length = 1656
Score = 232 (86.7 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 62/180 (34%), Positives = 91/180 (50%)
Query: 136 VRQVAAGGTHSVVLTREGHVWTWGQ-PW--PPGDIKQISVPVRVQGL--EQVKLIAVGAF 190
V Q A G H V+LT +G V+++G PW P +I S P+ L + V +A G+F
Sbjct: 43 VLQAALGVKHGVLLTEDGEVYSFGTLPWRSEPAEICP-SCPILENALIGQFVVTVASGSF 101
Query: 191 HNLALQEDGALWAWGNNEYGQLGTGDTQ--PRSQPIPVQ-----GLSGLTLVDIAAGGWH 243
HN A+ E G + WG N GQ + Q P P+ + L + ++ +A G H
Sbjct: 102 HNGAVTESGVAYMWGENSAGQCAVANQQYVPEPNPVSISDSETSSLLAVRILQLACGEEH 161
Query: 244 STALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTR 303
+ AL+ E++ WG G +LG PQKV LAG ++QV+CG HS+AL +
Sbjct: 162 TLALSISREIWAWGTG--CQLGL-ITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQ 218
Score = 183 (69.5 bits), Expect = 9.0e-21, Sum P(2) = 9.0e-21
Identities = 43/118 (36%), Positives = 63/118 (53%)
Query: 201 LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGE 260
+W WG + GQLG GD PR QP+ V+ L G ++ + AGG+HS ALT +VY WG
Sbjct: 527 VWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIYLEAGGYHSLALTAKSQVYSWGSNT 586
Query: 261 HGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVAL--TRDGH--IFSFGRGD 314
G+LG D + VP+ + + + V+ G +S+ L T D ++ GR D
Sbjct: 587 FGQLGHYDFPTT---VPRLAKVSSENGVWSVAAGQDYSLFLVDTEDFQPGLYYSGRQD 641
Score = 167 (63.8 bits), Expect = 9.3e-09, P = 9.3e-09
Identities = 62/214 (28%), Positives = 103/214 (48%)
Query: 162 WPPGDIKQISVPVRVQGL--EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQP 219
W G P R+ G + V A+G H + L EDG ++++G + + + P
Sbjct: 23 WQAGSYSV--TPERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFGTLPW-RSEPAEICP 79
Query: 220 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 279
S PI L G +V +A+G +H+ A+T+ G Y WG G+ + + P
Sbjct: 80 -SCPILENALIGQFVVTVASGSFHNGAVTESGVAYMWGENSAGQCAVANQQYVPEPNPVS 138
Query: 280 VN------LLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVP 333
++ LLA I+Q++CG H++AL+ I+++G G +LG +TT P+ P
Sbjct: 139 ISDSETSSLLAVR-ILQLACGEEHTLALSISREIWAWGTGC--QLGL---ITTTFPVTKP 192
Query: 334 INIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
+ AG R + + VACG H+LA+V+
Sbjct: 193 QKVE--HLAG-----RVVLQ-VACGAFHSLALVQ 218
Score = 146 (56.5 bits), Expect = 9.0e-21, Sum P(2) = 9.0e-21
Identities = 44/137 (32%), Positives = 66/137 (48%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERK-DDTGRILRRD 123
P NAL +V A G +H AV + G AY WG N GQC ++ + + D
Sbjct: 82 PILENALIGQFVVTVASGSFHNGAVTESGVAYMWGENSAGQCAVANQQYVPEPNPVSISD 141
Query: 124 IVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQ---ISVPVRVQGLE 180
A +++ Q+A G H++ L+ +W WG G I ++ P +V+ L
Sbjct: 142 SETSSLLAVRIL--QLACGEEHTLALSISREIWAWGTGCQLGLITTTFPVTKPQKVEHLA 199
Query: 181 -QVKL-IAVGAFHNLAL 195
+V L +A GAFH+LAL
Sbjct: 200 GRVVLQVACGAFHSLAL 216
Score = 138 (53.6 bits), Expect = 9.1e-16, Sum P(2) = 9.1e-16
Identities = 26/69 (37%), Positives = 43/69 (62%)
Query: 252 EVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFG 311
EV+ WG+G+ G+LG GD ++ P V L G++++ + GG HS+ALT ++S+G
Sbjct: 526 EVWTWGKGKEGQLGHGD--VLPRLQPLCVKCLDGKEVIYLEAGGYHSLALTAKSQVYSWG 583
Query: 312 RGDHGRLGY 320
G+LG+
Sbjct: 584 SNTFGQLGH 592
Score = 59 (25.8 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 24/87 (27%), Positives = 41/87 (47%)
Query: 66 SQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWG-GNEYGQCGEEPERKDDTGRILRRDI 124
S+ ++L +I+Q A G H LA+ +AWG G + G T + +
Sbjct: 142 SETSSLLAVRILQLACGEEHTLALSISREIWAWGTGCQLGLI-------TTTFPVTKPQK 194
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTR 151
V + A ++++ QVA G HS+ L +
Sbjct: 195 V--EHLAGRVVL-QVACGAFHSLALVQ 218
Score = 49 (22.3 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 8/24 (33%), Positives = 17/24 (70%)
Query: 307 IFSFGRGDHGRLGYGRKVTTGQPM 330
++++G+G G+LG+G + QP+
Sbjct: 527 VWTWGKGKEGQLGHGDVLPRLQPL 550
Score = 38 (18.4 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 2 ASTTSIIA--WGSGEDGQLGIGNNE 24
A T S +A WG GQ + N +
Sbjct: 105 AVTESGVAYMWGENSAGQCAVANQQ 129
>MGI|MGI:1919784 [details] [associations]
symbol:Rcc2 "regulator of chromosome condensation 2"
species:10090 "Mus musculus" [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0051301 "cell division"
evidence=IEA] MGI:MGI:1919784 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0000775 GO:GO:0005730 GO:GO:0051301
GO:GO:0007067 GO:GO:0005819 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005874 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:AL954710 eggNOG:COG5184
GeneTree:ENSGT00700000104160 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AK076040
EMBL:BC086666 EMBL:AK129370 IPI:IPI00222509 RefSeq:NP_776292.1
UniGene:Mm.253 ProteinModelPortal:Q8BK67 SMR:Q8BK67 STRING:Q8BK67
PhosphoSite:Q8BK67 PaxDb:Q8BK67 PRIDE:Q8BK67
Ensembl:ENSMUST00000038893 Ensembl:ENSMUST00000071169 GeneID:108911
KEGG:mmu:108911 UCSC:uc008vna.2 InParanoid:A2AWQ3 ChiTaRS:RCC2
NextBio:361459 Bgee:Q8BK67 CleanEx:MM_RCC2 Genevestigator:Q8BK67
GermOnline:ENSMUSG00000040945 Uniprot:Q8BK67
Length = 520
Score = 262 (97.3 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 63/200 (31%), Positives = 106/200 (53%)
Query: 181 QVKLIAVG--AFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIA 238
+V+ + G A H+L + +G LW+WG NE GQLG GDT+ P ++ LS +V A
Sbjct: 147 RVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAA 206
Query: 239 AGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHS 298
G H+ ALTD G V+ +G + G+LG G N + P ++ + G+ I +++CG S
Sbjct: 207 CGRNHTLALTDTGSVFAFGENKMGQLGLG-NQTDAVPSPAQI-MYNGQPITKMACGAEFS 264
Query: 299 VALTRDGHIFSFGRGDHGRLGY---GRKVTTGQPMEVPINIPAPRNAGDGVDR------- 348
+ + G+++SFG ++G+LG+ G+ + Q +E + PR +++
Sbjct: 265 MLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCEL-VPRRVAIFIEKTKDGQIL 323
Query: 349 ---RWIAKLVACGGRHTLAI 365
+ + VACG HTL +
Sbjct: 324 PVPNVVVRDVACGANHTLVL 343
Score = 219 (82.2 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 59/192 (30%), Positives = 98/192 (51%)
Query: 92 QGRAYAWGGNEYGQCGEEPERKDDTG-RILRRDIVIPQR--CAPKLIVRQVAAGG--THS 146
+G+ +G + G + K R L +++ P R C + VR V +G HS
Sbjct: 101 KGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHS 160
Query: 147 VVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGL--EQVKLIAVGAFHNLALQEDGA 200
+++T EG +W+WG+ GD K++ P ++ L E + L A G H LAL + G+
Sbjct: 161 LLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGS 220
Query: 201 LWAWGNNEYGQLGTGDTQPRSQPIPVQGL-SGLTLVDIAAGGWHSTALTDDGEVYGWGRG 259
++A+G N+ GQLG G+ Q + P P Q + +G + +A G S + G +Y +G
Sbjct: 221 VFAFGENKMGQLGLGN-QTDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCP 279
Query: 260 EHGRLGFGDNDK 271
E+G+LG + K
Sbjct: 280 EYGQLGHNSDGK 291
Score = 182 (69.1 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 38/110 (34%), Positives = 61/110 (55%)
Query: 229 LSGLTLVDIAAGGW--HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGE 286
LSG+ + + +G HS +T +G+++ WGR E G+LG GD + P+ + L+ E
Sbjct: 143 LSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVE--APRLIEALSHE 200
Query: 287 DIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKV-TTGQPMEVPIN 335
IV +CG H++ALT G +F+FG G+LG G + P ++ N
Sbjct: 201 AIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYN 250
Score = 167 (63.8 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 68/250 (27%), Positives = 115/250 (46%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKTENIP 65
++ ++G E GQLG +N + +++ + +E Y V +AI + KTK
Sbjct: 272 NLYSFGCPEYGQLG--HNSDGKFIARAQRIE-YDCELVP----RRVAIFIE-KTKD---- 319
Query: 66 SQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIV 125
Q+ + N + A G H L +D Q R ++WG YG+ G E+KD+ L +
Sbjct: 320 GQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHA-EQKDEMVPRLVKLFD 378
Query: 126 IPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGL--EQVK 183
P R A Q+ AG T S ++ G ++ WG + P VQ L +++
Sbjct: 379 FPGRGAT-----QIYAGYTCSFAVSEVGGLFFWGATNTSRE--STMYPKAVQDLCGWRIR 431
Query: 184 LIAVGAFHNLALQEDGALWAWGNNE-YGQLGTGDTQPRSQPIP--VQGLSGLTLVDIAAG 240
+A G ++ + D + +WG + +G+LG GD +P+S V+ L G+ +A G
Sbjct: 432 SLACGK-SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMG 490
Query: 241 GWHSTALTDD 250
HS + D
Sbjct: 491 YSHSLVIARD 500
Score = 164 (62.8 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 68/267 (25%), Positives = 115/267 (43%)
Query: 9 AWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKT--------- 59
+WG E GQLG G+ + E +++AL + G ++LA+ D G
Sbjct: 171 SWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMG 230
Query: 60 ------KTENIPSQVNALSNTK-IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPER 112
+T+ +PS + N + I + A G + +D +G Y++G EYGQ G +
Sbjct: 231 QLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSD- 289
Query: 113 KDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISV 172
G+ + R I C +L+ R+VA + T++G + + V
Sbjct: 290 ----GKFIARAQRIEYDC--ELVPRRVAI----FIEKTKDGQI--------------LPV 325
Query: 173 PVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQP--IPVQGLS 230
P V V+ +A GA H L L +++WG YG+LG + + P + +
Sbjct: 326 PNVV-----VRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFP 380
Query: 231 GLTLVDIAAGGWHSTALTDDGEVYGWG 257
G I AG S A+++ G ++ WG
Sbjct: 381 GRGATQIYAGYTCSFAVSEVGGLFFWG 407
Score = 153 (58.9 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 54/183 (29%), Positives = 79/183 (43%)
Query: 132 PKLIVRQVAAGGTHSVVLTREGHVWTWG----QPWPPGDIKQISVPVRVQ-----GLEQV 182
P ++VR VA G H++VL + V++WG + K VP V+ G
Sbjct: 326 PNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGAT 385
Query: 183 KLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGW 242
++ A G + A+ E G L+ WG + T P VQ L G + +A G
Sbjct: 386 QIYA-GYTCSFAVSEVGGLFFWGATNTSREST------MYPKAVQDLCGWRIRSLACGK- 437
Query: 243 HSTALTDDGEVYGWGRGE-HGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVAL 301
S + D WG G LG+GD+ S Q+V L G QV+ G +HS+ +
Sbjct: 438 SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVI 497
Query: 302 TRD 304
RD
Sbjct: 498 ARD 500
Score = 132 (51.5 bits), Expect = 6.7e-14, Sum P(2) = 6.7e-14
Identities = 54/198 (27%), Positives = 85/198 (42%)
Query: 182 VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQP--IPVQGLSGLTLVDIAA 239
V+ +A GA H L L +++WG YG+LG + + P + + G I A
Sbjct: 330 VRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYA 389
Query: 240 GGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSV 299
G S A+++ G ++ WG R S M P+ V L G I ++CG + S+
Sbjct: 390 GYTCSFAVSEVGGLFFWGATNTSR--------ESTMYPKAVQDLCGWRIRSLACGKS-SI 440
Query: 300 ALTRDGHIFSFGRGD-HGRLGYG--RKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVA 356
+ D S+G G LGYG + ++ EV DG+ ++ VA
Sbjct: 441 IVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEV--------KTLDGI----FSEQVA 488
Query: 357 CGGRHTLAIVEWQTEESK 374
G H+L I ++E K
Sbjct: 489 MGYSHSLVIARDESEAEK 506
Score = 123 (48.4 bits), Expect = 6.7e-14, Sum P(2) = 6.7e-14
Identities = 42/158 (26%), Positives = 75/158 (47%)
Query: 65 PSQVNALSNTKIVQAAIGGW--HCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRR 122
P + LS ++ G H L + +G+ ++WG NE GQ G ++ + R++
Sbjct: 137 PHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLI-- 194
Query: 123 DIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI---KQI-SVPVRVQG 178
+ + + IV A G H++ LT G V+ +G+ G + Q +VP Q
Sbjct: 195 -----EALSHEAIVL-AACGRNHTLALTDTGSVFAFGEN-KMGQLGLGNQTDAVPSPAQI 247
Query: 179 L---EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLG 213
+ + + +A GA ++ + G L+++G EYGQLG
Sbjct: 248 MYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLG 285
Score = 57 (25.1 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEE 25
+ T S+ A+G + GQLG+GN +
Sbjct: 215 LTDTGSVFAFGENKMGQLGLGNQTD 239
>UNIPROTKB|F1Q1C6 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AAEX03004216
EMBL:AAEX03004217 Ensembl:ENSCAFT00000018027 Uniprot:F1Q1C6
Length = 465
Score = 260 (96.6 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 98/310 (31%), Positives = 143/310 (46%)
Query: 64 IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE---EPERKDDTGRIL 120
+P ++ T+++Q + G H L + D ++ G N YGQCG E E ++ ++
Sbjct: 165 VPLPLDRPQETRVLQVSCGRAHSLILTDCEGVFSMGNNAYGQCGRNVVENEIYSESHKVN 224
Query: 121 RRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWT--WGQPWPPG----DIKQISVPV 174
R Q V QV G HS+ LT +G V++ WG G DI SVP
Sbjct: 225 RMQDFDGQ-------VVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYDIT--SVPT 275
Query: 175 RVQG-LEQVKLIAVGAFHN--LALQEDGALWAWGNNEYGQLG--TGDTQ---PRSQPIPV 226
++ G L V ++ V + + LA+ +G L+ WGN+EY QL T TQ PR P
Sbjct: 276 KLGGDLAGVNVVQVATYGDCCLAVSAEGGLFGWGNSEYLQLASVTDSTQVNVPRCLPF-- 333
Query: 227 QGLSGLTLVDIAA-GGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSS---KMVPQKVNL 282
SG+ V AA GG L +G V+ WG +G LG G N + +++P +
Sbjct: 334 ---SGVGKVKQAACGGTGCAVLNGEGHVFVWG---YGILGKGPNLVETAFPEVIPPTLFG 387
Query: 283 LA----GEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPA 338
L G + + CG +H ALT G +F +G+ G LG GR P V +P
Sbjct: 388 LTEFNPGVHVSHIWCGLSHFAALTSKGELFVWGKNIRGCLGIGRLEDQYFPWRV--TMPG 445
Query: 339 -PRNAGDGVD 347
P + GVD
Sbjct: 446 EPVDVACGVD 455
Score = 188 (71.2 bits), Expect = 6.6e-12, P = 6.6e-12
Identities = 73/245 (29%), Positives = 112/245 (45%)
Query: 136 VRQVAAGGTHSVVLTR-EGHVWTWG--------QPWPPGDIKQISVPV-RVQGLE-QVKL 184
V QV+ G HS++LT EG V++ G + +I S V R+Q + QV
Sbjct: 177 VLQVSCGRAHSLILTDCEG-VFSMGNNAYGQCGRNVVENEIYSESHKVNRMQDFDGQVVQ 235
Query: 185 IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQG-LSGLTLVDIAAGGWH 243
+ G H+L L + G +++ G GQ G G S P + G L+G+ +V +A G
Sbjct: 236 VVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYDITSVPTKLGGDLAGVNVVQVATYGDC 295
Query: 244 STALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTR 303
A++ +G ++GWG E+ +L D + VP+ + + Q +CGGT L
Sbjct: 296 CLAVSAEGGLFGWGNSEYLQLA-SVTDSTQVNVPRCLPFSGVGKVKQAACGGTGCAVLNG 354
Query: 304 DGHIFSFGRGDHGRLGYGRK-VTTGQPMEVPINI--PAPRNAGDGVDRRWIAKLVACGGR 360
+GH+F +G +G LG G V T P +P + N G V W CG
Sbjct: 355 EGHVFVWG---YGILGKGPNLVETAFPEVIPPTLFGLTEFNPGVHVSHIW------CGLS 405
Query: 361 HTLAI 365
H A+
Sbjct: 406 HFAAL 410
Score = 179 (68.1 bits), Expect = 6.9e-11, P = 6.9e-11
Identities = 86/287 (29%), Positives = 126/287 (43%)
Query: 43 VVAGSRNSLAICDDGKTKTEN-IPSQ---VNALSNT--KIVQAAIGGWHCLAVDDQGRAY 96
V + N+ C G+ EN I S+ VN + + ++VQ G H L + D+G Y
Sbjct: 196 VFSMGNNAYGQC--GRNVVENEIYSESHKVNRMQDFDGQVVQVVCGQDHSLFLTDKGEVY 253
Query: 97 AWGGNEYGQCGEEPERKDDTGRILRRDIV-IPQRCAPKLI---VRQVAAGGTHSVVLTRE 152
+ G GQ G G DI +P + L V QVA G + ++ E
Sbjct: 254 SCGWGADGQTG--------LGHY---DITSVPTKLGGDLAGVNVVQVATYGDCCLAVSAE 302
Query: 153 GHVWTWG-----QPWPPGDIKQISVP--VRVQGLEQVKLIAVGAFHNLALQEDGALWAWG 205
G ++ WG Q D Q++VP + G+ +VK A G L +G ++ WG
Sbjct: 303 GGLFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQAACGGTGCAVLNGEGHVFVWG 362
Query: 206 NNEYGQLGTG----DTQ-PRSQPIPVQGLS----GLTLVDIAAGGWHSTALTDDGEVYGW 256
YG LG G +T P P + GL+ G+ + I G H ALT GE++ W
Sbjct: 363 ---YGILGKGPNLVETAFPEVIPPTLFGLTEFNPGVHVSHIWCGLSHFAALTSKGELFVW 419
Query: 257 GRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTR 303
G+ G LG G + + P +V + GE V V+CG H V L +
Sbjct: 420 GKNIRGCLGIGRLE--DQYFPWRVTM-PGEP-VDVACGVDHMVTLAK 462
Score = 138 (53.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 35/117 (29%), Positives = 54/117 (46%)
Query: 218 QPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVP 277
+P P+P+ ++ ++ G HS LTD V+ G +G+ G +
Sbjct: 161 EPSPVPLPLDRPQETRVLQVSCGRAHSLILTDCEGVFSMGNNAYGQCGRNVVENEIYSES 220
Query: 278 QKVNLLAGED--IVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
KVN + D +VQV CG HS+ LT G ++S G G G+ G G T P ++
Sbjct: 221 HKVNRMQDFDGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYDITSVPTKL 277
>TAIR|locus:2009739 [details] [associations]
symbol:AT1G65920 species:3702 "Arabidopsis thaliana"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005773 "vacuole" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000306
InterPro:IPR001849 Pfam:PF01363 SMART:SM00064 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005773 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872 EMBL:AC009513
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 InterPro:IPR013591
Pfam:PF08381 PROSITE:PS51514 HSSP:Q15075 HOGENOM:HOG000240974
IPI:IPI00526779 PIR:E96683 RefSeq:NP_176767.1 UniGene:At.35824
ProteinModelPortal:Q9SRZ7 SMR:Q9SRZ7 PaxDb:Q9SRZ7 PRIDE:Q9SRZ7
EnsemblPlants:AT1G65920.1 GeneID:842904 KEGG:ath:AT1G65920
TAIR:At1g65920 InParanoid:Q9SRZ7 OMA:AQADSWF PhylomeDB:Q9SRZ7
ProtClustDB:CLSN2679687 Genevestigator:Q9SRZ7 Uniprot:Q9SRZ7
Length = 1006
Score = 264 (98.0 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 75/290 (25%), Positives = 132/290 (45%)
Query: 53 ICDDGKTKTENI-PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPE 111
+ D K + + + P + + + + ++G H V QG + WG G+ G +
Sbjct: 270 LIDGSKNQNDALSPKLLESATMFDVQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVN 329
Query: 112 RKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG-------QPWPP 164
D + + + VR VA + +T G ++ WG Q
Sbjct: 330 IDIDHPKRVES--------LEDVAVRSVACSDHQTCAVTESGELYLWGIDGGTIEQSGSQ 381
Query: 165 GDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPI 224
++IS V + G V +A GA+H + G L+ +G+ +G LG G + ++P
Sbjct: 382 FLTRKIS-DV-LGGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPK 439
Query: 225 PVQGLSGLTLVDIAAGGWHSTALTDD------------GEVYGWGRGEHGRLGFGDNDKS 272
V+ L + ++ ++ G WH+ A+ + G+++ WG G+ GRLG D+ +
Sbjct: 440 EVESLRRMKVISVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKR- 498
Query: 273 SKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGR 322
K+VP V L D ++VSCG T +VAL+ G +++ G HG+LG R
Sbjct: 499 -KLVPTCVTELIDHDFIKVSCGWTLTVALSISGTVYTMGSSIHGQLGCPR 547
Score = 234 (87.4 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 75/278 (26%), Positives = 125/278 (44%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWG--GNEYGQCGEEPERKDDTGRILRR 122
P +V +L + + A AV + G Y WG G Q G + L R
Sbjct: 335 PKRVESLEDVAVRSVACSDHQTCAVTESGELYLWGIDGGTIEQSGSQ---------FLTR 385
Query: 123 DIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPW----PPGDIKQISVPVRVQG 178
I L V VA G H+ ++T G ++T+G G ++ ++ P V+
Sbjct: 386 KI--SDVLGGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVES 443
Query: 179 LEQVKLIAV--GAFHNLALQED------------GALWAWGNNEYGQLGTGDTQPRSQPI 224
L ++K+I+V G +H A+ E G L+ WG+ + G+LG D++ + P
Sbjct: 444 LRRMKVISVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPT 503
Query: 225 PVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGD-NDKSSKMVPQKVNLL 283
V L + ++ G + AL+ G VY G HG+LG DKS +V + L
Sbjct: 504 CVTELIDHDFIKVSCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKDKSVNVV---LGNL 560
Query: 284 AGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYG 321
+ + ++ G H LT G+++++G+G +G+LG G
Sbjct: 561 TRQFVKDIASGSHHVAVLTSFGNVYTWGKGMNGQLGLG 598
Score = 213 (80.0 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 66/231 (28%), Positives = 102/231 (44%)
Query: 76 IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE---EPERKDDTGRILRRDIVIPQRCAP 132
++ A G WH V G+ + +G +G G E K LRR VI C P
Sbjct: 397 VLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGP 456
Query: 133 KLIVRQVAAGGTHSVVLTRE-GHVWTWGQP----WPPGDIKQISVPVRVQGLEQVKLIAV 187
V + G ++TWG D K+ VP V L I V
Sbjct: 457 WHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKV 516
Query: 188 GAFHNL--ALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHST 245
L AL G ++ G++ +GQLG + +S + + L+ + DIA+G H
Sbjct: 517 SCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKDKSVNVVLGNLTRQFVKDIASGSHHVA 576
Query: 246 ALTDDGEVYGWGRGEHGRLGFGD-NDKSSKMVPQKVNLLAGEDIVQ-VSCG 294
LT G VY WG+G +G+LG GD D++S ++ + + G+ +V+ ++CG
Sbjct: 577 VLTSFGNVYTWGKGMNGQLGLGDVRDRNSPVLVEPL----GDRLVESIACG 623
Score = 200 (75.5 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 54/188 (28%), Positives = 92/188 (48%)
Query: 182 VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGG 241
V+ I++GA H + G ++ WGN G+LG P V+ L + + +A
Sbjct: 294 VQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKRVESLEDVAVRSVACSD 353
Query: 242 WHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVN-LLAGE-DIVQVSCGGTHSV 299
+ A+T+ GE+Y WG + G + S+ + +K++ +L G ++ V+CG H+
Sbjct: 354 HQTCAVTESGELYLWGI-DGGTI----EQSGSQFLTRKISDVLGGSLTVLSVACGAWHTA 408
Query: 300 ALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGG 359
+T G +F++G G G LG+G + +P EV + + R + V+CG
Sbjct: 409 IVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEV-----------ESLRRMKVIS-VSCGP 456
Query: 360 RHTLAIVE 367
HT AIVE
Sbjct: 457 WHTAAIVE 464
Score = 168 (64.2 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 61/214 (28%), Positives = 97/214 (45%)
Query: 46 GSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQ 105
GS + + G ++ P +V +L K++ + G WH A+ + + +
Sbjct: 420 GS-GTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETANDRKFYNAK--S 476
Query: 106 CGEEPERKD-DTGRILRRDI---VIPQRCAPKLIVR---QVAAGGTHSVVLTREGHVWTW 158
CG+ D D GR+ D ++P C +LI +V+ G T +V L+ G V+T
Sbjct: 477 CGKLFTWGDGDKGRLGHADSKRKLVPT-CVTELIDHDFIKVSCGWTLTVALSISGTVYTM 535
Query: 159 GQP------WPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQL 212
G P K ++V + + VK IA G+ H L G ++ WG GQL
Sbjct: 536 GSSIHGQLGCPRAKDKSVNVVLGNLTRQFVKDIASGSHHVAVLTSFGNVYTWGKGMNGQL 595
Query: 213 GTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTA 246
G GD + R+ P+ V+ L G LV+ A G + TA
Sbjct: 596 GLGDVRDRNSPVLVEPL-GDRLVESIACGLNLTA 628
>MGI|MGI:1913989 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10090 "Mus musculus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=ISO;IDA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=ISO] [GO:0007059
"chromosome segregation" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0042393 "histone binding" evidence=ISO] [GO:0050790 "regulation
of catalytic activity" evidence=IDA] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
MGI:MGI:1913989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0051301
GO:GO:0007067 GO:GO:0007052 GO:GO:0051225 GO:GO:0000082
GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 HOGENOM:HOG000234341 HOVERGEN:HBG017712 EMBL:AK150153
EMBL:BC019807 IPI:IPI00626402 RefSeq:NP_598639.1 UniGene:Mm.255045
ProteinModelPortal:Q8VE37 SMR:Q8VE37 MINT:MINT-2568412
STRING:Q8VE37 PhosphoSite:Q8VE37 PaxDb:Q8VE37 PRIDE:Q8VE37
Ensembl:ENSMUST00000084250 Ensembl:ENSMUST00000105951 GeneID:100088
KEGG:mmu:100088 OrthoDB:EOG4320Z9 ChiTaRS:RCC1 NextBio:354253
Bgee:Q8VE37 CleanEx:MM_RCC1 Genevestigator:Q8VE37
GermOnline:ENSMUSG00000028896 Uniprot:Q8VE37
Length = 421
Score = 242 (90.2 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 90/312 (28%), Positives = 140/312 (44%)
Query: 36 EPYKVRSVVAGSRNSLAICDDGKTKTENI-PSQVNALSNTKIVQAAIGGWHCLAVDDQGR 94
EP V ++ G L + G++ E P+ V L + +VQA GG H + + G+
Sbjct: 33 EPGLVLTLGQGDVGQLGL---GESVLERKKPALVPLLQD--VVQAEAGGMHTVCLSQSGQ 87
Query: 95 AYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGH 154
Y++G N+ G G DT + ++P + + V QV+AG +H+ LT +G
Sbjct: 88 VYSFGCNDEGALGR------DTS--VEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGR 139
Query: 155 VWTWGQPWPPGDI-------KQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNN 207
V+ WG + K+ VPV+VQ V +A G H + L DG L+ G
Sbjct: 140 VFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDAPVVKVASGNDHLVMLTNDGDLYTLGCG 199
Query: 208 EYGQLGT--------GDTQ-------PRSQPIPVQGLSG-LTLVDIAAGGWHSTALTDDG 251
E GQLG G Q PR + +G G + D G + + A++ +G
Sbjct: 200 EQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREG 259
Query: 252 EVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAG--EDIVQVSCGGTHSVALTRDGHIFS 309
VYG+G + +LG S +PQ + + V S G H+V + +G +S
Sbjct: 260 HVYGFGLSNYHQLGTPGT--GSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYS 317
Query: 310 FGRGDHGRLGYG 321
GR ++GRLG G
Sbjct: 318 LGRAEYGRLGLG 329
Score = 218 (81.8 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 61/181 (33%), Positives = 94/181 (51%)
Query: 150 TREGHVWTWGQPWPPGDIKQISV---------PVRVQGLEQVKLIAVGAFHNLALQEDGA 200
T G V T GQ GD+ Q+ + P V L+ V G H + L + G
Sbjct: 32 TEPGLVLTLGQ----GDVGQLGLGESVLERKKPALVPLLQDVVQAEAGGMHTVCLSQSGQ 87
Query: 201 LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWG--R 258
++++G N+ G LG + S+ +P + +V ++AG H+ ALT+DG V+ WG R
Sbjct: 88 VYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFR 147
Query: 259 GEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRL 318
+G +G + K S MVP +V L A +V+V+ G H V LT DG +++ G G+ G+L
Sbjct: 148 DNNGVIGLLEPMKKS-MVPVQVQLDA--PVVKVASGNDHLVMLTNDGDLYTLGCGEQGQL 204
Query: 319 G 319
G
Sbjct: 205 G 205
Score = 215 (80.7 bits), Expect = 5.0e-17, Sum P(2) = 5.0e-17
Identities = 73/263 (27%), Positives = 118/263 (44%)
Query: 60 KTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPER------K 113
K +P QV + +V+ A G H + + + G Y G E GQ G PE +
Sbjct: 160 KKSMVPVQVQL--DAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGR 217
Query: 114 DDTGRIL-RRDIVIPQRCAPKLIVRQVAAGGTH-SVVLTREGHVWTWG-----QPWPPGD 166
GR+L R +++ R + Q A G + + ++REGHV+ +G Q PG
Sbjct: 218 QGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGT 277
Query: 167 IKQISVPVRVQGLEQVKLIAVG----AFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ 222
+P + + VG H + + +G ++ G EYG+LG G+ +
Sbjct: 278 -GSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGA-EEK 335
Query: 223 PIPVQGLSGLTLVD-IAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVN 281
IP +S L +V +A G A++ DG V+ WG G + +LG G ++ + V
Sbjct: 336 SIPTL-ISRLPVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGK 394
Query: 282 LLAGEDIVQVSCGGTHSVALTRD 304
L ++ VS GG H+V L +D
Sbjct: 395 QLENRVVLTVSSGGQHTVLLVKD 417
Score = 208 (78.3 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 54/186 (29%), Positives = 95/186 (51%)
Query: 188 GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIA-AGGWHSTA 246
GA+ A+ +G ++ +G + Y QLGT T P + T + +GG H T
Sbjct: 248 GAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTV 307
Query: 247 LTD-DGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDG 305
D +G+ Y GR E+GRLG G+ + K +P ++ L + V+CG + A+++DG
Sbjct: 308 CMDSEGKAYSLGRAEYGRLGLGEGAEE-KSIPTLISRLPV--VSSVACGASVGYAVSKDG 364
Query: 306 HIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
+F++G G + +LG G+ P+E+ G ++ R + V+ GG+HT+ +
Sbjct: 365 RVFAWGMGTNYQLGTGQDEDAWSPVEM---------TGKQLENR-VVLTVSSGGQHTVLL 414
Query: 366 VEWQTE 371
V+ Q +
Sbjct: 415 VKDQAQ 420
Score = 139 (54.0 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 36/91 (39%), Positives = 50/91 (54%)
Query: 243 HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALT 302
H + T+ G V G+G+ G+LG G++ K P V LL +D+VQ GG H+V L+
Sbjct: 27 HRSHNTEPGLVLTLGQGDVGQLGLGESVLERKK-PALVPLL--QDVVQAEAGGMHTVCLS 83
Query: 303 RDGHIFSFGRGDHGRLGYGRKVTTGQPMEVP 333
+ G ++SFG D G LG V G M VP
Sbjct: 84 QSGQVYSFGCNDEGALGRDTSVE-GSEM-VP 112
Score = 95 (38.5 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 45/174 (25%), Positives = 77/174 (44%)
Query: 7 IIAWGSGEDGQLGIGNNE-EREWVCVVKALEPYKVRSVVAGSRNSLAI----------CD 55
++ G G+ GQLG+G + ER+ +V L+ V AG +++ + C+
Sbjct: 37 VLTLGQGDVGQLGLGESVLERKKPALVPLLQD--VVQAEAGGMHTVCLSQSGQVYSFGCN 94
Query: 56 D----GK-TKTENIPSQVNALS-NTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 109
D G+ T E + K+VQ + G H A+ + GR + WG
Sbjct: 95 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSF-------- 146
Query: 110 PERKDDTGRI--LR--RDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG 159
+D+ G I L + ++P + V +VA+G H V+LT +G ++T G
Sbjct: 147 ---RDNNGVIGLLEPMKKSMVPVQVQLDAPVVKVASGNDHLVMLTNDGDLYTLG 197
Score = 55 (24.4 bits), Expect = 5.0e-17, Sum P(2) = 5.0e-17
Identities = 14/58 (24%), Positives = 29/58 (50%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK 58
++ + + ++G ++G LG + E + K KV V AG ++ A+ +DG+
Sbjct: 82 LSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGR 139
Score = 37 (18.1 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 7/9 (77%), Positives = 7/9 (77%)
Query: 11 GSGEDGQLG 19
G GE GQLG
Sbjct: 197 GCGEQGQLG 205
>TAIR|locus:2079147 [details] [associations]
symbol:AT3G47660 "AT3G47660" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008536
"Ran GTPase binding" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000306 Pfam:PF01363 SMART:SM00064
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 IPI:IPI00548806 RefSeq:NP_190350.4 UniGene:At.48747
UniGene:At.66547 ProteinModelPortal:F4JCN3 SMR:F4JCN3 PRIDE:F4JCN3
EnsemblPlants:AT3G47660.1 GeneID:823920 KEGG:ath:AT3G47660
OMA:CLSHEIS ArrayExpress:F4JCN3 Uniprot:F4JCN3
Length = 954
Score = 263 (97.6 bits), Expect = 3.0e-20, P = 3.0e-20
Identities = 65/227 (28%), Positives = 116/227 (51%)
Query: 113 KDDTGRILRRDIVIPQ--RCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----WPPGD 166
K + L D +P+ + L + ++ G ++V++T++G +++WG+ G
Sbjct: 276 KSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGV 335
Query: 167 IKQISVPVRVQGLE--QVKLIAVGAFHNLALQEDGALWAWGNNEY--GQLGTGDTQPRSQ 222
+ P + V+L G FH A+ G L+AWG+ ++ G LG G +
Sbjct: 336 CSYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWK 395
Query: 223 PIPVQG-LSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVN 281
P+ + G + G+ + I+ G WH+ +T +G+++ +G G G LG GD + S +P++V
Sbjct: 396 PVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGD--RISTNIPREVE 453
Query: 282 LLAGEDIVQVSCGGTHSVAL-------TRDGHIFSFGRGDHGRLGYG 321
L G ++ +CG HS A+ T G +F++G GD GRLG+G
Sbjct: 454 ALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHG 500
Score = 237 (88.5 bits), Expect = 5.6e-17, P = 5.6e-17
Identities = 73/253 (28%), Positives = 115/253 (45%)
Query: 85 HCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLI-------VR 137
+ + V QG+ Y+WG G+ G G +P PKLI V
Sbjct: 310 YAVLVTKQGQMYSWGEESGGRLGH--------GVCS----YVPH---PKLIDEFNGSTVE 354
Query: 138 QVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISV------PVRVQG-LE--QVKLIAVG 188
G H+ +T G ++ WG + + PVR+ G +E VK I+ G
Sbjct: 355 LADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCG 414
Query: 189 AFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTAL- 247
+H + +G L+ +G+ +G LG GD + P V+ L+G + A G WHS A+
Sbjct: 415 PWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVV 474
Query: 248 ------TDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVAL 301
T G+++ WG G+ GRLG GD + +++P V L QV+CG + +VAL
Sbjct: 475 SVFGEATSSGKLFTWGDGDDGRLGHGDIE--CRLIPSCVTELDTTSFQQVACGQSITVAL 532
Query: 302 TRDGHIFSFGRGD 314
+ G +++ G D
Sbjct: 533 SMSGQVYAMGTAD 545
Score = 219 (82.2 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 49/151 (32%), Positives = 82/151 (54%)
Query: 185 IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIA-AGGWH 243
I+ G + + + + G +++WG G+LG G P + +G T V++A G +H
Sbjct: 304 ISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGST-VELADCGEFH 362
Query: 244 STALTDDGEVYGWGRGEH--GRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVAL 301
+ A+T G++Y WG G+H G LG G K V + + + G + +SCG H+ +
Sbjct: 363 TCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPV-RILGQMEGIYVKAISCGPWHTAFV 421
Query: 302 TRDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
T +G +F+FG G G LG+G +++T P EV
Sbjct: 422 TSEGKLFTFGDGTFGALGHGDRISTNIPREV 452
Score = 205 (77.2 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 70/273 (25%), Positives = 120/273 (43%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEY--GQCGEEPERKDDTGRILRR 122
P ++ + + + A G +H AV G YAWG ++ G G +G +
Sbjct: 342 PKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGL------GSGASHWK 395
Query: 123 DIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQG 178
+ I + + V+ ++ G H+ +T EG ++T+G GD ++P V+
Sbjct: 396 PVRILGQMEG-IYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEA 454
Query: 179 LEQVKLI--AVGAFHNLAL-------QEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGL 229
L + I A G +H+ A+ G L+ WG+ + G+LG GD + R P V L
Sbjct: 455 LNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTEL 514
Query: 230 SGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIV 289
+ +A G + AL+ G+VY +G D P + G+ V
Sbjct: 515 DTTSFQQVACGQSITVALSMSGQVYA--------MGTADPSHDIVRAPSCIEGGLGKSFV 566
Query: 290 Q-VSCGGTHSVALTRDGHIFSFGRGDHGRLGYG 321
Q V+CG H L ++++G+G +G+LG+G
Sbjct: 567 QEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHG 599
Score = 194 (73.4 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 63/205 (30%), Positives = 97/205 (47%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIGGWHCLAV-------DDQGRAYAWGGNEYGQCGEE 109
G + NIP +V AL+ + ++AA G WH AV G+ + WG + G+ G
Sbjct: 441 GDRISTNIPREVEALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGH- 499
Query: 110 PERKDDTGRILRRDIVIPQRCAPKLIV---RQVAAGGTHSVVLTREGHVWTWGQPWPPGD 166
G I R +IP C +L +QVA G + +V L+ G V+ G P D
Sbjct: 500 -------GDIECR--LIPS-CVTELDTTSFQQVACGQSITVALSMSGQVYAMGTADPSHD 549
Query: 167 IKQISVPVRVQG-LEQ--VKLIAVGAFHNLA-LQEDGALWAWGNNEYGQLGTGDTQPRSQ 222
I + P ++G L + V+ +A G FH++A L ++ WG GQLG GDT+ R
Sbjct: 550 I--VRAPSCIEGGLGKSFVQEVACG-FHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCM 606
Query: 223 PIPVQGLSGLTLVDIAAGGWHSTAL 247
P V+ L G + + G ++ +
Sbjct: 607 PTLVKALKGKQVRKVVCGSNYTATI 631
Score = 173 (66.0 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 62/234 (26%), Positives = 101/234 (43%)
Query: 82 GGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAA 141
G WH V +G+ + +G +G G D + R++ C + I + A
Sbjct: 414 GPWHTAFVTSEGKLFTFGDGTFGALGHG----DRISTNIPREVEALNGC--RTI--KAAC 465
Query: 142 GGTHSVVL-------TREGHVWTWGQP----WPPGDIKQISVPVRVQGLEQVKL--IAVG 188
G HS + T G ++TWG GDI+ +P V L+ +A G
Sbjct: 466 GVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVACG 525
Query: 189 AFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLV-DIAAGGWHSTAL 247
+AL G ++A G + D R+ P ++G G + V ++A G H L
Sbjct: 526 QSITVALSMSGQVYAMGTADPSH----DIV-RA-PSCIEGGLGKSFVQEVACGFHHIAVL 579
Query: 248 TDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVAL 301
EVY WG+G +G+LG GD + + +P V L G+ + +V CG ++ +
Sbjct: 580 NSKAEVYTWGKGSNGQLGHGDTEY--RCMPTLVKALKGKQVRKVVCGSNYTATI 631
>TAIR|locus:2090136 [details] [associations]
symbol:AT3G15430 "AT3G15430" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] [GO:0006486 "protein glycosylation" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB022218 EMBL:AC024081 HSSP:P18754
EMBL:AY150379 IPI:IPI00535822 RefSeq:NP_566512.1 RefSeq:NP_974323.1
UniGene:At.24353 ProteinModelPortal:Q9LDU3 SMR:Q9LDU3 IntAct:Q9LDU3
EnsemblPlants:AT3G15430.1 EnsemblPlants:AT3G15430.2 GeneID:820782
KEGG:ath:AT3G15430 TAIR:At3g15430 InParanoid:Q9LDU3 OMA:GDNERAQ
PhylomeDB:Q9LDU3 ProtClustDB:CLSN2688406 Genevestigator:Q9LDU3
Uniprot:Q9LDU3
Length = 488
Score = 258 (95.9 bits), Expect = 3.4e-20, P = 3.4e-20
Identities = 76/277 (27%), Positives = 128/277 (46%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P V AL T Q A G + + +G AY G N +GQ G D R + + +
Sbjct: 207 PKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHG----DTLDRPVPKVV 262
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----WPPGDIKQISVPVRVQGLE 180
+ P V Q+AAG ++ + +T++G V+++G G+ + P +Q +
Sbjct: 263 EFLKTIGP---VVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFK 319
Query: 181 Q----VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVD 236
+ + ++ G H +AL +G ++ WG G LG GD + P + L+ V
Sbjct: 320 RKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQ 379
Query: 237 IAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMV-PQKVNLLAGEDIVQVSCGG 295
+ A + L + G +YG+G G LGF D S K++ P+ + L + QVS G
Sbjct: 380 VCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGL 439
Query: 296 THSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
H++ +T+ G IF FG + +LG+ +P E+
Sbjct: 440 YHTIVVTQRGRIFGFGDNERAQLGHDSLRGCLEPTEI 476
Score = 238 (88.8 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 81/270 (30%), Positives = 131/270 (48%)
Query: 77 VQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIV 136
+Q A G +H L +++ + Y+ G + G E T + I P P +
Sbjct: 114 MQIATGKYHTLLINNS-KVYSCGVSLSGVLAHGSET---TQCVAFTPIEFP---FPAQVA 166
Query: 137 RQVAAGGTHSVVLTREGHVWTWGQPWPP--GDI---KQISVPVRVQGLEQV--KLIAVGA 189
QV+A HS + + G V T G G + + I P V+ L+ K +A G
Sbjct: 167 -QVSATQNHSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGL 225
Query: 190 FHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGL-TLVDIAAGGWHSTALT 248
+ L +G + G+N +GQLG GDT R P V+ L + +V IAAG + A+T
Sbjct: 226 HFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVT 285
Query: 249 DDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLA--GEDIVQVSCGGTHSVALTRDGH 306
DG VY +G G + LG G+ + ++ P+ + G I++VS G H+VAL +G
Sbjct: 286 QDGSVYSFGSGSNFCLGHGE--QQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGR 343
Query: 307 IFSFGRGDHGRLGYGRKVTTGQPMEVPINI 336
++++G+G G LG+G + P +V +N+
Sbjct: 344 VYTWGKGYCGALGHGDENDKITP-QVLVNL 372
>RGD|1592835 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10116 "Rattus norvegicus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007052 "mitotic spindle
organization" evidence=ISO] [GO:0007059 "chromosome segregation"
evidence=ISO] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0031965 "nuclear membrane" evidence=ISO] [GO:0042393 "histone
binding" evidence=ISO] [GO:0050790 "regulation of catalytic
activity" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] RGD:1592835
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:CH473968 KO:K11493 CTD:1104
HOVERGEN:HBG017712 EMBL:BC160834 IPI:IPI00896784
RefSeq:NP_001121661.1 UniGene:Rn.217123 SMR:B1H227 GeneID:682908
KEGG:rno:682908 NextBio:724000 Genevestigator:B1H227 Uniprot:B1H227
Length = 421
Score = 247 (92.0 bits), Expect = 5.0e-19, P = 5.0e-19
Identities = 91/312 (29%), Positives = 141/312 (45%)
Query: 36 EPYKVRSVVAGSRNSLAICDDGKTKTENI-PSQVNALSNTKIVQAAIGGWHCLAVDDQGR 94
EP V ++ G L + G++ E P+ V L + +VQA GG H + + G+
Sbjct: 33 EPGLVLTLGQGDVGQLGL---GESVLERKKPALVPLLQD--VVQAEAGGMHTVCLSQSGQ 87
Query: 95 AYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGH 154
Y++G N+ G G DT + ++P + + V QV+AG +H+ LT +G
Sbjct: 88 VYSFGCNDEGALGR------DTS--VEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGR 139
Query: 155 VWTWGQPWPPGDI-------KQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNN 207
V+ WG + K+ VPV+VQ QV +A G H + L DG L+ G
Sbjct: 140 VFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDTQVVKVASGNDHLVMLTTDGDLYTLGCG 199
Query: 208 EYGQLGT--------GDTQ-------PRSQPIPVQGLSG-LTLVDIAAGGWHSTALTDDG 251
E GQLG G Q PR + +G G + D G + + A++ +G
Sbjct: 200 EQGQLGRVPELFANRGGRQGLERLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREG 259
Query: 252 EVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAG--EDIVQVSCGGTHSVALTRDGHIFS 309
VYG+G + +LG S +PQ + + V S G H+V + +G +S
Sbjct: 260 HVYGFGLSNYHQLGTPGT--GSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYS 317
Query: 310 FGRGDHGRLGYG 321
GR ++GRLG G
Sbjct: 318 LGRAEYGRLGLG 329
Score = 223 (83.6 bits), Expect = 4.7e-18, Sum P(2) = 4.7e-18
Identities = 75/263 (28%), Positives = 119/263 (45%)
Query: 60 KTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTG-- 117
K +P QV +T++V+ A G H + + G Y G E GQ G PE + G
Sbjct: 160 KKSMVPVQVQL--DTQVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGR 217
Query: 118 ----RIL-RRDIVIPQRCAPKLIVRQVAAGGTH-SVVLTREGHVWTWG-----QPWPPGD 166
R+L R +++ R + Q A G + + ++REGHV+ +G Q PG
Sbjct: 218 QGLERLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGT 277
Query: 167 IKQISVPVRVQGLEQVKLIAVG----AFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ 222
+P + + VG H + + +G ++ G EYG+LG G+ +
Sbjct: 278 -GSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGA-EEK 335
Query: 223 PIPVQGLSGLTLVD-IAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVN 281
IP +S L +V +A G A++ DG V+ WG G + +LG G D + V
Sbjct: 336 SIPTL-ISRLPVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQEDDAWSPVEMTGK 394
Query: 282 LLAGEDIVQVSCGGTHSVALTRD 304
L +++ VS GG H+V L +D
Sbjct: 395 QLENREVLTVSSGGQHTVLLVKD 417
Score = 218 (81.8 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 71/231 (30%), Positives = 110/231 (47%)
Query: 150 TREGHVWTWGQPWPPGDIKQISV---------PVRVQGLEQVKLIAVGAFHNLALQEDGA 200
T G V T GQ GD+ Q+ + P V L+ V G H + L + G
Sbjct: 32 TEPGLVLTLGQ----GDVGQLGLGESVLERKKPALVPLLQDVVQAEAGGMHTVCLSQSGQ 87
Query: 201 LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWG--R 258
++++G N+ G LG + S+ +P + +V ++AG H+ ALT+DG V+ WG R
Sbjct: 88 VYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFR 147
Query: 259 GEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRL 318
+G +G + K S MVP +V L +V+V+ G H V LT DG +++ G G+ G+L
Sbjct: 148 DNNGVIGLLEPMKKS-MVPVQVQL--DTQVVKVASGNDHLVMLTTDGDLYTLGCGEQGQL 204
Query: 319 GYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVEWQ 369
G VP + A R G++R + + V R T V +Q
Sbjct: 205 G-----------RVP-ELFANRGGRQGLERLLVPRCVLLKSRGTRGRVRFQ 243
Score = 208 (78.3 bits), Expect = 3.4e-20, Sum P(2) = 3.4e-20
Identities = 54/186 (29%), Positives = 97/186 (52%)
Query: 188 GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIA-AGGWHSTA 246
GA+ A+ +G ++ +G + Y QLGT T P + T + +GG H T
Sbjct: 248 GAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTV 307
Query: 247 LTD-DGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDG 305
D +G+ Y GR E+GRLG G+ + K +P ++ L + V+CG + A+++DG
Sbjct: 308 CMDSEGKAYSLGRAEYGRLGLGEGAEE-KSIPTLISRLPV--VSSVACGASVGYAVSKDG 364
Query: 306 HIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
+F++G G + +LG G++ P+E+ G ++ R + V+ GG+HT+ +
Sbjct: 365 RVFAWGMGTNYQLGTGQEDDAWSPVEM---------TGKQLENREVLT-VSSGGQHTVLL 414
Query: 366 VEWQTE 371
V+ +T+
Sbjct: 415 VKDKTQ 420
Score = 139 (54.0 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 36/91 (39%), Positives = 50/91 (54%)
Query: 243 HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALT 302
H + T+ G V G+G+ G+LG G++ K P V LL +D+VQ GG H+V L+
Sbjct: 27 HRSHNTEPGLVLTLGQGDVGQLGLGESVLERKK-PALVPLL--QDVVQAEAGGMHTVCLS 83
Query: 303 RDGHIFSFGRGDHGRLGYGRKVTTGQPMEVP 333
+ G ++SFG D G LG V G M VP
Sbjct: 84 QSGQVYSFGCNDEGALGRDTSVE-GSEM-VP 112
Score = 94 (38.1 bits), Expect = 3.4e-20, Sum P(2) = 3.4e-20
Identities = 45/174 (25%), Positives = 77/174 (44%)
Query: 7 IIAWGSGEDGQLGIGNNE-EREWVCVVKALEPYKVRSVVAGSRNSLAI----------CD 55
++ G G+ GQLG+G + ER+ +V L+ V AG +++ + C+
Sbjct: 37 VLTLGQGDVGQLGLGESVLERKKPALVPLLQD--VVQAEAGGMHTVCLSQSGQVYSFGCN 94
Query: 56 D----GK-TKTENIPSQVNALS-NTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 109
D G+ T E + K+VQ + G H A+ + GR + WG
Sbjct: 95 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSF-------- 146
Query: 110 PERKDDTGRI--LR--RDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG 159
+D+ G I L + ++P + V +VA+G H V+LT +G ++T G
Sbjct: 147 ---RDNNGVIGLLEPMKKSMVPVQVQLDTQVVKVASGNDHLVMLTTDGDLYTLG 197
Score = 55 (24.4 bits), Expect = 4.7e-18, Sum P(2) = 4.7e-18
Identities = 14/58 (24%), Positives = 29/58 (50%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK 58
++ + + ++G ++G LG + E + K KV V AG ++ A+ +DG+
Sbjct: 82 LSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGR 139
Score = 37 (18.1 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 7/9 (77%), Positives = 7/9 (77%)
Query: 11 GSGEDGQLG 19
G GE GQLG
Sbjct: 197 GCGEQGQLG 205
>UNIPROTKB|P23800 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:10036 "Mesocricetus auratus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0007059
"chromosome segregation" evidence=ISS] [GO:0031492 "nucleosomal DNA
binding" evidence=ISS] [GO:0051225 "spindle assembly" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 GO:GO:0051225
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0031492 HOVERGEN:HBG017712 EMBL:M33579 PIR:A34726
ProteinModelPortal:P23800 SMR:P23800 Uniprot:P23800
Length = 421
Score = 235 (87.8 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 88/312 (28%), Positives = 142/312 (45%)
Query: 36 EPYKVRSVVAGSRNSLAICDDGKTKTENI-PSQVNALSNTKIVQAAIGGWHCLAVDDQGR 94
EP V ++ G L + G++ E P+ V L + +VQA GG H + ++ G+
Sbjct: 33 EPGLVLTLGQGDVGQLGL---GESVLERKKPALVPLLQD--VVQAEAGGMHTVCLNQSGQ 87
Query: 95 AYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGH 154
Y++G N+ G G DT + ++P + + V QV+AG +H+ LT +G
Sbjct: 88 VYSFGCNDEGALGR------DTS--VEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGR 139
Query: 155 VWTWGQPWPPGDI-------KQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNN 207
V+ WG + K+ VPV+VQ V +A G H + L DG L+ G
Sbjct: 140 VFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDMPVVKVASGNDHLVMLTTDGDLYTLGCG 199
Query: 208 EYGQLGT--------GDTQ-------PRSQPIPVQGLSG-LTLVDIAAGGWHSTALTDDG 251
E GQLG G Q P+ + +G G + D G + + A++ +G
Sbjct: 200 EQGQLGRVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAISREG 259
Query: 252 EVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAG--EDIVQVSCGGTHSVALTRDGHIFS 309
VYG+G + +LG +S +PQ + + V S G H++ + +G +S
Sbjct: 260 HVYGFGLSNYHQLGTPGT--ASCFIPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGKAYS 317
Query: 310 FGRGDHGRLGYG 321
GR ++GRLG G
Sbjct: 318 LGRAEYGRLGLG 329
Score = 216 (81.1 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 72/237 (30%), Positives = 112/237 (47%)
Query: 144 THSVVLTREGHVWTWGQPWPPGDIKQISV---------PVRVQGLEQVKLIAVGAFHNLA 194
+H T G V T GQ GD+ Q+ + P V L+ V G H +
Sbjct: 26 SHRSHKTEPGLVLTLGQ----GDVGQLGLGESVLERKKPALVPLLQDVVQAEAGGMHTVC 81
Query: 195 LQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVY 254
L + G ++++G N+ G LG + S+ +P + +V ++AG H+ ALT+DG V+
Sbjct: 82 LNQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVF 141
Query: 255 GWG--RGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGR 312
WG R +G +G + K S MVP +V L +V+V+ G H V LT DG +++ G
Sbjct: 142 LWGSFRDNNGVIGLLEPMKKS-MVPVQVQL--DMPVVKVASGNDHLVMLTTDGDLYTLGC 198
Query: 313 GDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVEWQ 369
G+ G+LG VP + A R G++R + K V R + V +Q
Sbjct: 199 GEQGQLG-----------RVP-ELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQ 243
Score = 207 (77.9 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 74/263 (28%), Positives = 117/263 (44%)
Query: 60 KTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTG-- 117
K +P QV + +V+ A G H + + G Y G E GQ G PE + G
Sbjct: 160 KKSMVPVQVQL--DMPVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGR 217
Query: 118 ----RILRRDIVIPQRCAPKLIVR-QVAAGGTH-SVVLTREGHVWTWG-----QPWPPGD 166
R+L V+ + + VR Q A G + + ++REGHV+ +G Q PG
Sbjct: 218 QGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGT 277
Query: 167 IKQISVPVRVQGLEQVKLIAVG----AFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ 222
+P + + VG H + + +G ++ G EYG+LG G+ +
Sbjct: 278 ASCF-IPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGKAYSLGRAEYGRLGLGEGA-EEK 335
Query: 223 PIPVQGLSGLTLVD-IAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVN 281
IP +S L +V +A G A++ DG V+ WG G + +LG G ++ + V
Sbjct: 336 SIPTL-ISRLPVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGK 394
Query: 282 LLAGEDIVQVSCGGTHSVALTRD 304
L ++ VS GG H+V L +D
Sbjct: 395 QLENRVVLTVSSGGQHTVLLVKD 417
Score = 204 (76.9 bits), Expect = 5.1e-20, Sum P(2) = 5.1e-20
Identities = 55/188 (29%), Positives = 96/188 (51%)
Query: 188 GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIA-AGGWHSTA 246
GA+ A+ +G ++ +G + Y QLGT T P + T + +GG H T
Sbjct: 248 GAYLTFAISREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKSWVGFSGGQHHTI 307
Query: 247 LTD-DGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDG 305
D +G+ Y GR E+GRLG G+ + K +P ++ L + V+CG + A+++DG
Sbjct: 308 CMDSEGKAYSLGRAEYGRLGLGEGAEE-KSIPTLISRLPV--VSSVACGASVGYAVSKDG 364
Query: 306 HIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
+F++G G + +LG G+ P+E+ G ++ R + V+ GG+HT+ +
Sbjct: 365 RVFAWGMGTNYQLGTGQDEDAWSPVEM---------TGKQLENR-VVLTVSSGGQHTVLL 414
Query: 366 VEWQTEES 373
V+ E+S
Sbjct: 415 VK-DKEQS 421
Score = 97 (39.2 bits), Expect = 5.1e-20, Sum P(2) = 5.1e-20
Identities = 45/174 (25%), Positives = 78/174 (44%)
Query: 7 IIAWGSGEDGQLGIGNNE-EREWVCVVKALEPYKVRSVVAGSRNSLAI----------CD 55
++ G G+ GQLG+G + ER+ +V L+ V AG +++ + C+
Sbjct: 37 VLTLGQGDVGQLGLGESVLERKKPALVPLLQD--VVQAEAGGMHTVCLNQSGQVYSFGCN 94
Query: 56 D----GK-TKTENIPSQVNALS-NTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 109
D G+ T E + K+VQ + G H A+ + GR + WG
Sbjct: 95 DEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSF-------- 146
Query: 110 PERKDDTGRI--LR--RDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG 159
+D+ G I L + ++P + + V +VA+G H V+LT +G ++T G
Sbjct: 147 ---RDNNGVIGLLEPMKKSMVPVQVQLDMPVVKVASGNDHLVMLTTDGDLYTLG 197
Score = 37 (18.1 bits), Expect = 8.9e-14, Sum P(2) = 8.9e-14
Identities = 7/9 (77%), Positives = 7/9 (77%)
Query: 11 GSGEDGQLG 19
G GE GQLG
Sbjct: 197 GCGEQGQLG 205
>MGI|MGI:1921268 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10090 "Mus musculus" [GO:0001662 "behavioral fear response"
evidence=IMP] [GO:0001726 "ruffle" evidence=IDA] [GO:0001881
"receptor recycling" evidence=IMP] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005769 "early endosome"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO] [GO:0006979 "response to
oxidative stress" evidence=IMP] [GO:0007032 "endosome organization"
evidence=ISO] [GO:0007041 "lysosomal transport" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=ISO] [GO:0007528 "neuromuscular
junction development" evidence=IMP] [GO:0007626 "locomotory
behavior" evidence=IMP] [GO:0008104 "protein localization"
evidence=IMP] [GO:0008219 "cell death" evidence=ISO] [GO:0014069
"postsynaptic density" evidence=IDA] [GO:0016020 "membrane"
evidence=ISO] [GO:0016050 "vesicle organization" evidence=IDA]
[GO:0016197 "endosomal transport" evidence=IMP] [GO:0016601 "Rac
protein signal transduction" evidence=ISO] [GO:0017112 "Rab
guanyl-nucleotide exchange factor activity" evidence=ISO]
[GO:0017137 "Rab GTPase binding" evidence=ISO] [GO:0030027
"lamellipodium" evidence=IDA] [GO:0030424 "axon" evidence=ISO]
[GO:0030425 "dendrite" evidence=ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030675 "Rac GTPase activator activity"
evidence=ISO] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISO] [GO:0031982 "vesicle" evidence=ISO]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IDA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO] [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043197 "dendritic spine" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISO]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISO] [GO:0048365 "Rac GTPase binding" evidence=ISO]
[GO:0048812 "neuron projection morphogenesis" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=ISO] [GO:0071902
"positive regulation of protein serine/threonine kinase activity"
evidence=ISO] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS00741 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
MGI:MGI:1921268 INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204
GO:GO:0005829 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812 GO:GO:0007626
GO:GO:0035249 GO:GO:0043539 GO:GO:0030027 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466548 GO:GO:0001726
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GO:GO:0005769 GO:GO:0031982
GO:GO:0017137 GO:GO:0017112 GO:GO:0030676 GO:GO:0001662
GO:GO:0032855 GO:GO:0001881 GO:GO:0051036 GO:GO:0032313
GO:GO:0016050 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB053307 EMBL:AC153652 EMBL:BC031479
EMBL:BC046828 EMBL:AK014320 IPI:IPI00170364 IPI:IPI00309844
RefSeq:NP_001153420.2 RefSeq:NP_082993.4 RefSeq:NP_666221.1
UniGene:Mm.272078 STRING:Q920R0 PhosphoSite:Q920R0 PaxDb:Q920R0
PRIDE:Q920R0 Ensembl:ENSMUST00000027178 Ensembl:ENSMUST00000163058
GeneID:74018 KEGG:mmu:74018 UCSC:uc007bdm.2 UCSC:uc007bdn.2
HOGENOM:HOG000033908 InParanoid:Q920R0 NextBio:339546
Genevestigator:Q920R0 GermOnline:ENSMUSG00000026024 Uniprot:Q920R0
Length = 1651
Score = 217 (81.4 bits), Expect = 9.6e-15, Sum P(2) = 9.6e-15
Identities = 59/180 (32%), Positives = 90/180 (50%)
Query: 136 VRQVAAGGTHSVVLTREGHVWTWGQ-PWPPGDIKQI--SVPVRVQGL--EQVKLIAVGAF 190
V Q A G H V+LT +G V+++G PW + +I S P+ L V +A G+F
Sbjct: 43 VLQAALGVRHGVLLTEDGEVYSFGTLPWK-SESAEICPSSPLLESALVGHHVITVATGSF 101
Query: 191 HNLALQEDGALWAWGNNEYGQLGTGDTQ--PRSQPIPVQGLS-----GLTLVDIAAGGWH 243
H+ A+ E G ++ WG N GQ + Q P P+ + + ++ +A G H
Sbjct: 102 HSGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPVSISDSETSPSLAVRILQLACGEEH 161
Query: 244 STALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTR 303
+ AL+ E++ WG G +LG PQKV LAG ++QV+CG HS+AL +
Sbjct: 162 TLALSLSREIWAWGTG--CQLGL-ITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQ 218
Score = 177 (67.4 bits), Expect = 5.6e-20, Sum P(2) = 5.6e-20
Identities = 42/118 (35%), Positives = 62/118 (52%)
Query: 201 LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGE 260
+W WG + GQLG GD PR QP+ V+ L G ++ + AGG HS ALT +VY WG
Sbjct: 522 VWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNT 581
Query: 261 HGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVAL--TRDGH--IFSFGRGD 314
G+LG + + VP+ + + + V+ G +S+ L T D ++ GR D
Sbjct: 582 FGQLGHSEFPTT---VPRLSKVSSENGVWSVAAGQDYSLFLVDTEDFQPGLYYSGRQD 636
Score = 171 (65.3 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 61/215 (28%), Positives = 103/215 (47%)
Query: 162 WPPGDIKQISVPVRVQGL--EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQP 219
W G P R+ G + V A+G H + L EDG ++++G + + + + P
Sbjct: 23 WQAGSFSL--TPERLPGWGGKTVLQAALGVRHGVLLTEDGEVYSFGTLPW-KSESAEICP 79
Query: 220 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 279
S P+ L G ++ +A G +HS A+T+ G VY WG G+ + + P
Sbjct: 80 -SSPLLESALVGHHVITVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVPE--PSP 136
Query: 280 VNLLAGED-------IVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
V++ E I+Q++CG H++AL+ I+++G G +LG +TT P+
Sbjct: 137 VSISDSETSPSLAVRILQLACGEEHTLALSLSREIWAWGTGC--QLGL---ITTTFPVTK 191
Query: 333 PINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
P + AG R + + VACG H+LA+V+
Sbjct: 192 PQKVE--HLAG-----RVVLQ-VACGAFHSLALVQ 218
Score = 147 (56.8 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 28/75 (37%), Positives = 46/75 (61%)
Query: 252 EVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFG 311
EV+ WG+G+ G+LG GD ++ P V L G++++ + GG+HS+ALT ++S+G
Sbjct: 521 EVWTWGKGKEGQLGHGD--VLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWG 578
Query: 312 RGDHGRLGYGRKVTT 326
G+LG+ TT
Sbjct: 579 SNTFGQLGHSEFPTT 593
Score = 145 (56.1 bits), Expect = 5.6e-20, Sum P(2) = 5.6e-20
Identities = 44/139 (31%), Positives = 66/139 (47%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERK-DDTGRILRRD 123
P +AL ++ A G +H AV + G Y WG N GQC ++ + + D
Sbjct: 82 PLLESALVGHHVITVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPVSISD 141
Query: 124 IVIPQRCAPKLIVR--QVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQ---ISVPVRVQG 178
+P L VR Q+A G H++ L+ +W WG G I ++ P +V+
Sbjct: 142 ----SETSPSLAVRILQLACGEEHTLALSLSREIWAWGTGCQLGLITTTFPVTKPQKVEH 197
Query: 179 LE-QVKL-IAVGAFHNLAL 195
L +V L +A GAFH+LAL
Sbjct: 198 LAGRVVLQVACGAFHSLAL 216
Score = 53 (23.7 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 31/109 (28%), Positives = 46/109 (42%)
Query: 75 KIVQAAIGGWHCLAVDDQGRAYAWG-GNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPK 133
+I+Q A G H LA+ +AWG G + G T + + V + A +
Sbjct: 151 RILQLACGEEHTLALSLSREIWAWGTGCQLGLI-------TTTFPVTKPQKV--EHLAGR 201
Query: 134 LIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEQV 182
+++ QVA G HS+ L Q PP D+K VP R Q+
Sbjct: 202 VVL-QVACGAFHSLALV---------QCLPPQDLKP--VPERCNQCSQL 238
Score = 50 (22.7 bits), Expect = 9.6e-15, Sum P(2) = 9.6e-15
Identities = 17/59 (28%), Positives = 31/59 (52%)
Query: 307 IFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
++++G+G G+LG+G + QP+ V +D + + L A GG H+LA+
Sbjct: 522 VWTWGKGKEGQLGHGDVLPRLQPLCVKC-----------LDGKEVIHLEA-GGSHSLAL 568
>UNIPROTKB|H0YEL8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860
EMBL:AC124058 EMBL:AC124078 Ensembl:ENST00000529151 Uniprot:H0YEL8
Length = 299
Score = 238 (88.8 bits), Expect = 6.8e-20, P = 6.8e-20
Identities = 71/203 (34%), Positives = 100/203 (49%)
Query: 180 EQVKLIAVGAFHNLALQEDGALWAWGNN--EYGQ-LGTGDTQP----RSQPIPVQGLSGL 232
E+V IA G H +A G ++ WG G+ L G T P +P V GL
Sbjct: 17 EKVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENS 76
Query: 233 TLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV--NLLAGEDIVQ 290
+ + AG HS +LTD GEVY WG +HG+L N+ + VPQK+ + E +
Sbjct: 77 KAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLA---NEAAFLPVPQKIEAHCFQNEKVTA 133
Query: 291 VSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTT--GQPME-----VPINIPAPRNAG 343
+ G TH VA T G +F++GR D+G+LG RK+ T G +E +P + P P +
Sbjct: 134 IWSGWTHLVAQTETGKMFTWGRADYGQLG--RKLETYEGWKLEKQDSFLPCSRP-PNSMP 190
Query: 344 DGVDRRWIAKLVACGGRHTLAIV 366
A V+CG H LAI+
Sbjct: 191 SSPHCLTGATEVSCGSEHNLAII 213
Score = 188 (71.2 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 60/214 (28%), Positives = 96/214 (44%)
Query: 173 PVRVQGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDT-QPRSQPIPVQGL 229
P RV GLE K + V G+ H+ +L + G ++ WG+N++GQL P Q I
Sbjct: 67 PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCF 126
Query: 230 SGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLG----------------FGDNDKSS 273
+ I +G H A T+ G+++ WGR ++G+LG F +
Sbjct: 127 QNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPP 186
Query: 274 KMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVP 333
+P + L G +VSCG H++A+ G +S+G +HG G G + P V
Sbjct: 187 NSMPSSPHCLTGA--TEVSCGSEHNLAII-GGVCYSWGWNEHGMCGDGTEANVWAPKPVQ 243
Query: 334 INIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
+ + G+ LV CG H+LA+ +
Sbjct: 244 ALL-----SSSGL-------LVGCGAGHSLALCQ 265
Score = 168 (64.2 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 49/156 (31%), Positives = 73/156 (46%)
Query: 127 PQRCAPKLIVRQV---AAGGTHSVVLTREGHVWTWGQPWP-------PGDIKQI----SV 172
P+ C L +V AAG H+V T G V+ WG PG +
Sbjct: 7 PESCCHMLHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKE 66
Query: 173 PVRVQGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDT-QPRSQPIPVQGL 229
P RV GLE K + V G+ H+ +L + G ++ WG+N++GQL P Q I
Sbjct: 67 PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCF 126
Query: 230 SGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLG 265
+ I +G H A T+ G+++ WGR ++G+LG
Sbjct: 127 QNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG 162
Score = 167 (63.8 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 59/209 (28%), Positives = 82/209 (39%)
Query: 61 TENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRIL 120
T PS+V L N+K + G H ++ D G Y WG N++GQ E L
Sbjct: 63 TAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANE-------AAFL 115
Query: 121 RRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP--------------WP--- 163
I C V + +G TH V T G ++TWG+ W
Sbjct: 116 PVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEK 175
Query: 164 -----PGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQ 218
P S+P L ++ G+ HNLA+ G ++WG NE+G G G
Sbjct: 176 QDSFLPCSRPPNSMPSSPHCLTGATEVSCGSEHNLAII-GGVCYSWGWNEHGMCGDGTEA 234
Query: 219 PRSQPIPVQGLSGLTLVDIAAGGWHSTAL 247
P PVQ L + + + G HS AL
Sbjct: 235 NVWAPKPVQALLSSSGLLVGCGAGHSLAL 263
Score = 119 (46.9 bits), Expect = 0.00016, P = 0.00016
Identities = 45/155 (29%), Positives = 63/155 (40%)
Query: 71 LSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVI--PQ 128
L K+V A G H +A G + WG CG R+ G+ L P
Sbjct: 14 LHKEKVVCIAAGLRHAVAATASGIVFQWGTG-LASCG----RRLCPGQTLPLFFTAKEPS 68
Query: 129 RCA--PKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQ----ISVPVRVQG--LE 180
R V AG HS LT G V+ WG G + + VP +++ +
Sbjct: 69 RVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSN-KHGQLANEAAFLPVPQKIEAHCFQ 127
Query: 181 QVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLG 213
K+ A+ G H +A E G ++ WG +YGQLG
Sbjct: 128 NEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG 162
>WB|WBGene00017195 [details] [associations]
symbol:glo-4 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] [GO:0045202 "synapse"
evidence=IDA] [GO:0030424 "axon" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0030424 GO:GO:0045202 GO:GO:0019915
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 EMBL:FO081074
PIR:T28816 PIR:T28817 RefSeq:NP_505392.2 ProteinModelPortal:Q5DX34
SMR:Q5DX34 STRING:Q5DX34 PaxDb:Q5DX34 EnsemblMetazoa:F07C3.4
GeneID:179306 KEGG:cel:CELE_F07C3.4 UCSC:F07C3.4 CTD:179306
WormBase:F07C3.4 HOGENOM:HOG000021586 InParanoid:Q5DX34 OMA:MANHEDV
NextBio:904820 Uniprot:Q5DX34
Length = 1392
Score = 229 (85.7 bits), Expect = 8.2e-16, P = 8.2e-16
Identities = 54/158 (34%), Positives = 84/158 (53%)
Query: 183 KLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGW 242
+ IA GA H L L G L AWG N +GQ G G + + V G + IA G +
Sbjct: 779 RAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANLHQVDG-DWPAIEKIACGQF 837
Query: 243 HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALT 302
HS + DG ++ +G G G+LG G + S+++VP +VN L + + Q++CG H+V LT
Sbjct: 838 HSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLICK-VTQIACGRAHTVVLT 896
Query: 303 RDGHIFSFGRGDHGRLGYG---RKVTTGQPMEV-PINI 336
G + G G +G++G +KV P+ + P+ +
Sbjct: 897 DTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLRV 934
Score = 215 (80.7 bits), Expect = 7.0e-20, Sum P(2) = 7.0e-20
Identities = 62/187 (33%), Positives = 86/187 (45%)
Query: 80 AIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQV 139
A G H L + G+ AWGGN +GQCG + RI V A + ++
Sbjct: 782 ACGAEHILVLSSSGQLSAWGGNRFGQCGV-----GHSFRIANLHQVDGDWPA----IEKI 832
Query: 140 AAGGTHSVVLTREGHVWT-----WGQPWPPG--DIKQISVPVRVQGLE-QVKLIAVGAFH 191
A G HS + +G +WT WGQ G + Q+ VP RV GL +V IA G H
Sbjct: 833 ACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQL-VPTRVNGLICKVTQIACGRAH 891
Query: 192 NLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDG 251
+ L + G + G+ YGQ+G D + L L + DIA +HS +T+D
Sbjct: 892 TVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLRVRDIATHYYHSICITEDN 951
Query: 252 EVYGWGR 258
V+ WGR
Sbjct: 952 RVFEWGR 958
Score = 162 (62.1 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 35/91 (38%), Positives = 53/91 (58%)
Query: 229 LSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDI 288
L G +V +A G HS +T +G +Y WG+G +LG G+ K+ +M P +V G
Sbjct: 1020 LDG-NIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGN--KNERMEPHQVFEPNGAKW 1076
Query: 289 VQVSCGGTHSVALTRDGHIFSFGRGDHGRLG 319
V VS G H++A T DG +F++G+ D G+ G
Sbjct: 1077 VNVSLGNNHTIASTDDGSVFAWGKNDFGQCG 1107
Score = 147 (56.8 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 28/81 (34%), Positives = 44/81 (54%)
Query: 185 IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHS 244
+A G H+ + +G L+ WG QLG G+ R +P V +G V+++ G H+
Sbjct: 1027 VACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWVNVSLGNNHT 1086
Query: 245 TALTDDGEVYGWGRGEHGRLG 265
A TDDG V+ WG+ + G+ G
Sbjct: 1087 IASTDDGSVFAWGKNDFGQCG 1107
Score = 128 (50.1 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 48/186 (25%), Positives = 80/186 (43%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNN--------EEREWVCVVKALEPYKVRSVVAGSRNSL- 51
++S+ + AWG GQ G+G++ + +W + K + + S S SL
Sbjct: 791 LSSSGQLSAWGGNRFGQCGVGHSFRIANLHQVDGDWPAIEK-IACGQFHSAFICSDGSLW 849
Query: 52 --------AICDDGKTKTEN-IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNE 102
+ G+ + +P++VN L K+ Q A G H + + D GR G
Sbjct: 850 TFGWGVWGQLGHGGRNNSNQLVPTRVNGLI-CKVTQIACGRAHTVVLTDTGRVLVCGSGS 908
Query: 103 YGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPW 162
YGQ G + DD ++ P P L VR +A HS+ +T + V+ WG+
Sbjct: 909 YGQMGVD----DDIKKVFA---FTPLPLGP-LRVRDIATHYYHSICITEDNRVFEWGRN- 959
Query: 163 PPGDIK 168
P ++K
Sbjct: 960 -PQELK 964
Score = 124 (48.7 bits), Expect = 0.00040, P = 0.00040
Identities = 36/133 (27%), Positives = 64/133 (48%)
Query: 237 IAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGT 296
IA G H L+ G++ WG G+ G G + + + + + A I +++CG
Sbjct: 781 IACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANLHQVDGDWPA---IEKIACGQF 837
Query: 297 HSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKL-- 354
HS + DG +++FG G G+LG+G + + Q + +N G+ I K+
Sbjct: 838 HSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVN---------GL----ICKVTQ 884
Query: 355 VACGGRHTLAIVE 367
+ACG HT+ + +
Sbjct: 885 IACGRAHTVVLTD 897
Score = 114 (45.2 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 41/140 (29%), Positives = 65/140 (46%)
Query: 76 IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLI 135
I + A G +H + G + +G +GQ G GR +V P R +
Sbjct: 829 IEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHG-------GRNNSNQLV-PTRVNGLIC 880
Query: 136 -VRQVAAGGTHSVVLTREGHVW-----TWGQPWPPGDIKQISV--PVRVQGLEQVKLIAV 187
V Q+A G H+VVLT G V ++GQ DIK++ P+ + L +V+ IA
Sbjct: 881 KVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPL-RVRDIAT 939
Query: 188 GAFHNLALQEDGALWAWGNN 207
+H++ + ED ++ WG N
Sbjct: 940 HYYHSICITEDNRVFEWGRN 959
Score = 100 (40.3 bits), Expect = 7.0e-20, Sum P(2) = 7.0e-20
Identities = 26/78 (33%), Positives = 44/78 (56%)
Query: 287 DIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGV 346
+IV V+CG +HS +T +G ++++G+G +LG+G K + ME P + P A
Sbjct: 1023 NIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNK---NERME-PHQVFEPNGA---- 1074
Query: 347 DRRWIAKLVACGGRHTLA 364
+W+ V+ G HT+A
Sbjct: 1075 --KWVN--VSLGNNHTIA 1088
>RGD|1310372 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEP] [GO:0001726 "ruffle" evidence=IEA;ISO]
[GO:0001881 "receptor recycling" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=ISO;ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005769 "early endosome" evidence=ISO;ISS]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=ISO;ISS] [GO:0006979 "response to oxidative stress"
evidence=IEA;ISO] [GO:0007032 "endosome organization" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular
junction development" evidence=IEA;ISO] [GO:0007626 "locomotory
behavior" evidence=IEA;ISO] [GO:0008104 "protein localization"
evidence=IEA;ISO] [GO:0008219 "cell death" evidence=IMP]
[GO:0014069 "postsynaptic density" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0016050 "vesicle organization"
evidence=IEA;ISO] [GO:0016197 "endosomal transport"
evidence=IEA;ISO] [GO:0016601 "Rac protein signal transduction"
evidence=IDA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=ISO;ISS] [GO:0017137 "Rab GTPase binding"
evidence=ISO;ISS] [GO:0030027 "lamellipodium" evidence=IEA;ISO]
[GO:0030424 "axon" evidence=IDA] [GO:0030425 "dendrite"
evidence=ISO;ISS;IDA] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030676 "Rac guanyl-nucleotide exchange factor activity"
evidence=ISO;ISS] [GO:0031982 "vesicle" evidence=ISO;ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA;ISO]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO;ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO;ISS] [GO:0043005 "neuron
projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] [GO:0043234 "protein complex" evidence=ISO;ISS]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=ISO;ISS] [GO:0045860 "positive regulation of protein
kinase activity" evidence=ISO;ISS] [GO:0048812 "neuron projection
morphogenesis" evidence=ISO;ISS] [GO:0051036 "regulation of
endosome size" evidence=ISO;ISS] [GO:0071902 "positive regulation
of protein serine/threonine kinase activity" evidence=ISO]
InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 RGD:1310372
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0016020 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0008219 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0016601
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OrthoDB:EOG4FTVZP
GO:GO:0005769 GO:GO:0031982 GO:GO:0017137 GO:GO:0017112
GO:GO:0030676 GO:GO:0001662 GO:GO:0032855 GO:GO:0001881
GO:GO:0051036 GO:GO:0032313 GO:GO:0016050 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:AABR03068212 EMBL:BK005190
IPI:IPI00366955 RefSeq:NP_001013431.1 UniGene:Rn.219733
ProteinModelPortal:P0C5Y8 STRING:P0C5Y8 PhosphoSite:P0C5Y8
Ensembl:ENSRNOT00000035209 GeneID:363235 KEGG:rno:363235
UCSC:RGD:1310372 InParanoid:P0C5Y8 NextBio:682932
Genevestigator:P0C5Y8 Uniprot:P0C5Y8
Length = 1651
Score = 228 (85.3 bits), Expect = 4.5e-16, Sum P(2) = 4.5e-16
Identities = 62/180 (34%), Positives = 92/180 (51%)
Query: 136 VRQVAAGGTHSVVLTREGHVWTWGQ-PWPPGDIKQI--SVPVRVQGL--EQVKLIAVGAF 190
V Q A G H V+LT +G V+++G PW + +I S P+ L V +A G+F
Sbjct: 43 VLQAALGVKHGVLLTEDGEVYSFGTLPWK-SEAAEICPSSPLLESALVGHHVVTVATGSF 101
Query: 191 HNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQ-------GLSGLTLVDIAAGGWH 243
H+ A+ E G ++ WG N GQ + Q S+P PV L + ++ +A G H
Sbjct: 102 HSGAVTESGVVYMWGENAAGQCAVANQQYVSEPSPVSISDSETSPLLAVRILQLACGEEH 161
Query: 244 STALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTR 303
+ AL+ E++ WG G +LG PQKV LAG ++QV+CG HS+AL +
Sbjct: 162 TLALSISREIWAWGTG--CQLGL-ITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQ 218
Score = 180 (68.4 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 64/214 (29%), Positives = 104/214 (48%)
Query: 162 WPPGDIKQISVPVRVQGL--EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQP 219
W G P R+ G + V A+G H + L EDG ++++G + + + P
Sbjct: 23 WQAGSFSL--TPERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFGTLPW-KSEAAEICP 79
Query: 220 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 279
S P+ L G +V +A G +HS A+T+ G VY WG G+ + S+ P
Sbjct: 80 -SSPLLESALVGHHVVTVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVSEPSPVS 138
Query: 280 VN------LLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVP 333
++ LLA I+Q++CG H++AL+ I+++G G +LG +TT P+ P
Sbjct: 139 ISDSETSPLLAVR-ILQLACGEEHTLALSISREIWAWGTGC--QLGL---ITTTFPVTKP 192
Query: 334 INIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
+ AG R + + VACG H+LA+V+
Sbjct: 193 QKVE--HLAG-----RVVLQ-VACGAFHSLALVQ 218
Score = 176 (67.0 bits), Expect = 9.1e-20, Sum P(2) = 9.1e-20
Identities = 42/118 (35%), Positives = 62/118 (52%)
Query: 201 LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGE 260
+W WG + GQLG GD PR QP+ V+ L G ++ + AGG HS ALT +VY WG
Sbjct: 522 VWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNT 581
Query: 261 HGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVAL--TRDGH--IFSFGRGD 314
G+LG + + VP+ + + + V+ G +S+ L T D ++ GR D
Sbjct: 582 FGQLGHSEFPTT---VPRLSKVSSESGVWSVAAGHGYSLFLVDTEDFQPGLYYSGRQD 636
Score = 147 (56.8 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 28/75 (37%), Positives = 46/75 (61%)
Query: 252 EVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFG 311
EV+ WG+G+ G+LG GD ++ P V L G++++ + GG+HS+ALT ++S+G
Sbjct: 521 EVWTWGKGKEGQLGHGD--VLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWG 578
Query: 312 RGDHGRLGYGRKVTT 326
G+LG+ TT
Sbjct: 579 SNTFGQLGHSEFPTT 593
Score = 144 (55.7 bits), Expect = 9.1e-20, Sum P(2) = 9.1e-20
Identities = 45/139 (32%), Positives = 66/139 (47%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERK-DDTGRILRRD 123
P +AL +V A G +H AV + G Y WG N GQC ++ + + D
Sbjct: 82 PLLESALVGHHVVTVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVSEPSPVSISD 141
Query: 124 IVIPQRCAPKLIVR--QVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQ---ISVPVRVQG 178
+P L VR Q+A G H++ L+ +W WG G I ++ P +V+
Sbjct: 142 ----SETSPLLAVRILQLACGEEHTLALSISREIWAWGTGCQLGLITTTFPVTKPQKVEH 197
Query: 179 LE-QVKL-IAVGAFHNLAL 195
L +V L +A GAFH+LAL
Sbjct: 198 LAGRVVLQVACGAFHSLAL 216
Score = 60 (26.2 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 33/118 (27%), Positives = 50/118 (42%)
Query: 66 SQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWG-GNEYGQCGEEPERKDDTGRILRRDI 124
S+ + L +I+Q A G H LA+ +AWG G + G T + +
Sbjct: 142 SETSPLLAVRILQLACGEEHTLALSISREIWAWGTGCQLGLI-------TTTFPVTKPQK 194
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEQV 182
V + A ++++ QVA G HS+ L Q PP D+K VP R Q+
Sbjct: 195 V--EHLAGRVVL-QVACGAFHSLALV---------QCLPPQDLKP--VPERCNQCSQL 238
Score = 50 (22.7 bits), Expect = 4.5e-16, Sum P(2) = 4.5e-16
Identities = 17/59 (28%), Positives = 31/59 (52%)
Query: 307 IFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
++++G+G G+LG+G + QP+ V +D + + L A GG H+LA+
Sbjct: 522 VWTWGKGKEGQLGHGDVLPRLQPLCVKC-----------LDGKEVIHLEA-GGSHSLAL 568
>UNIPROTKB|G3V2I3 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AC068831 HGNC:HGNC:30457
ProteinModelPortal:G3V2I3 SMR:G3V2I3 Ensembl:ENST00000555155
ArrayExpress:G3V2I3 Bgee:G3V2I3 Uniprot:G3V2I3
Length = 374
Score = 185 (70.2 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 31/84 (36%), Positives = 52/84 (61%)
Query: 181 QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAG 240
+ + + +GA H L L G +++WG +GQLG G + +P ++ L GL + ++AAG
Sbjct: 159 RARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAG 218
Query: 241 GWHSTALTDDGEVYGWGRGEHGRL 264
GWHS +++ G++Y WG E G+L
Sbjct: 219 GWHSVCVSETGDIYIWGWNESGQL 242
Score = 142 (55.0 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 50/167 (29%), Positives = 79/167 (47%)
Query: 134 LIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNL 193
L++ +VAAGG HSV ++ G ++ WG W + Q+++P R E + +A
Sbjct: 210 LVMAEVAAGGWHSVCVSETGDIYIWG--W--NESGQLALPTRNLA-EDGETVA-----RE 259
Query: 194 ALQEDGALWAWGNNEYGQLGTGDTQP--RSQPIP-VQGLS-GLTLVDIAAGGWHSTALTD 249
L EDG+ G G P QP P + L G V + G H+ +T
Sbjct: 260 ELNEDGSQV----KRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTR 315
Query: 250 DGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDI-VQ-VSCG 294
GE+Y WG G++G+LG D + P++V + + V+ V+CG
Sbjct: 316 TGELYTWGWGKYGQLGHEDTTSLDR--PRRVEYFVDKQLQVKAVTCG 360
Score = 134 (52.2 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 27/79 (34%), Positives = 46/79 (58%)
Query: 240 GGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSV 299
G H+ L G+V+ WG G HG+LG G + +++ P+ + L G + +V+ GG HSV
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLE--AELEPRLLEALQGLVMAEVAAGGWHSV 223
Query: 300 ALTRDGHIFSFGRGDHGRL 318
++ G I+ +G + G+L
Sbjct: 224 CVSETGDIYIWGWNESGQL 242
Score = 128 (50.1 bits), Expect = 8.8e-13, Sum P(2) = 8.8e-13
Identities = 30/98 (30%), Positives = 49/98 (50%)
Query: 78 QAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVR 137
Q +G H L +D G+ ++WGG +GQ G + R+L L++
Sbjct: 162 QLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLE--------ALQGLVMA 213
Query: 138 QVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVR 175
+VAAGG HSV ++ G ++ WG W + Q+++P R
Sbjct: 214 EVAAGGWHSVCVSETGDIYIWG--W--NESGQLALPTR 247
Score = 116 (45.9 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 27/88 (30%), Positives = 48/88 (54%)
Query: 131 APKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGLEQVKL-- 184
AP+L RQ+ G H+++L G V++WG G ++ P ++ L+ + +
Sbjct: 155 APELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAE 214
Query: 185 IAVGAFHNLALQEDGALWAWGNNEYGQL 212
+A G +H++ + E G ++ WG NE GQL
Sbjct: 215 VAAGGWHSVCVSETGDIYIWGWNESGQL 242
Score = 112 (44.5 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 28/86 (32%), Positives = 46/86 (53%)
Query: 277 PQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINI 336
P ++L G D V+ SCG H+ +TR G ++++G G +G+LG+ + TT ++
Sbjct: 289 PALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGH--EDTT--------SL 338
Query: 337 PAPRNAGDGVDRRWIAKLVACGGRHT 362
PR VD++ K V CG +T
Sbjct: 339 DRPRRVEYFVDKQLQVKAVTCGPWNT 364
Score = 103 (41.3 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 21/67 (31%), Positives = 30/67 (44%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDT 116
G + E P + AL + + A GGWH + V + G Y WG NE GQ +
Sbjct: 193 GTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAED 252
Query: 117 GRILRRD 123
G + R+
Sbjct: 253 GETVARE 259
Score = 74 (31.1 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDG 57
+ +WG G GQLG G E +++AL+ + V AG +S+ + + G
Sbjct: 179 VFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETG 229
>UNIPROTKB|E1BX75 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0001726
"ruffle" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0016050 "vesicle
organization" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0017137 "Rab GTPase binding"
evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA] [GO:0030676
"Rac guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0031982 "vesicle" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0032855 "positive regulation of
Rac GTPase activity" evidence=IEA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0043539 "protein serine/threonine kinase
activator activity" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IEA] [GO:0051036 "regulation of endosome
size" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0043539 GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 OMA:AKPAIDF
GO:GO:0005769 GO:GO:0017112 GO:GO:0030676 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AADN02019863
IPI:IPI00580588 Ensembl:ENSGALT00000013707 Uniprot:E1BX75
Length = 1651
Score = 237 (88.5 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 69/224 (30%), Positives = 106/224 (47%)
Query: 91 DQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLT 150
++G Y W G C PER +P C ++ Q A G H ++LT
Sbjct: 16 ERGLVYTWRA---GSCSVTPER-------------LPGLCGKTVL--QAALGTNHGLLLT 57
Query: 151 REGHVWTWGQ-PWPPGDIKQIS-VPVRVQGL--EQVKLIAVGAFHNLALQEDGALWAWGN 206
G V+++G+ PW G + + P+ L + V +A G+FHN A+ E G ++ WGN
Sbjct: 58 EGGEVYSFGKLPWRSGPEEFCANSPILENTLLGQHVITVAAGSFHNGAVTEGGVVYMWGN 117
Query: 207 NEYGQLGTGDTQ--PRSQPIPVQG-----LSGLTLVDIAAGGWHSTALTDDGEVYGWGRG 259
N GQ + P QPI + L + ++ +A G H+ AL+ E++ WG G
Sbjct: 118 NSSGQCAVANQPYVPEPQPISISDSETSPLLSVRVLQLACGEEHTLALSLSREIWAWGSG 177
Query: 260 EHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTR 303
+LG PQKV LAG ++Q++CG HS+AL +
Sbjct: 178 --CQLGL-ITTTFPVTKPQKVEHLAGRVVLQIACGAYHSLALVQ 218
Score = 189 (71.6 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 47/145 (32%), Positives = 74/145 (51%)
Query: 164 PGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGAL-------WAWGNNEYGQLGTGD 216
PG + Q+S P ++ + + K+ V + + D L W+WG + GQLG GD
Sbjct: 480 PGLLSQVS-PRLLRKVGRAKMRTVALTPTYSGEADALLPSLRTEVWSWGRGKDGQLGHGD 538
Query: 217 TQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMV 276
PR QP+ V+ L G ++ ++AGG HS ALT +VY WG G+LG + S V
Sbjct: 539 VLPRLQPLCVKSLDGKEVIQLSAGGHHSLALTAKSQVYSWGSNIFGQLG---HTNSPTTV 595
Query: 277 PQKVNLLAGEDIVQVSCGGTHSVAL 301
P+ + G+ + + G +S+ L
Sbjct: 596 PRLAKV-CGDGVWSTAAGSDYSLFL 619
Score = 171 (65.3 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 59/204 (28%), Positives = 102/204 (50%)
Query: 173 PVRVQGL--EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLS 230
P R+ GL + V A+G H L L E G ++++G + + G + S PI L
Sbjct: 32 PERLPGLCGKTVLQAALGTNHGLLLTEGGEVYSFGKLPW-RSGPEEFCANS-PILENTLL 89
Query: 231 GLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGED--- 287
G ++ +AAG +H+ A+T+ G VY WG G+ + + PQ +++ E
Sbjct: 90 GQHVITVAAGSFHNGAVTEGGVVYMWGNNSSGQCAVANQPYVPE--PQPISISDSETSPL 147
Query: 288 ----IVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAG 343
++Q++CG H++AL+ I+++G G +LG +TT P+ P + AG
Sbjct: 148 LSVRVLQLACGEEHTLALSLSREIWAWGSGC--QLGL---ITTTFPVTKPQKVE--HLAG 200
Query: 344 DGVDRRWIAKLVACGGRHTLAIVE 367
R + + +ACG H+LA+V+
Sbjct: 201 -----RVVLQ-IACGAYHSLALVQ 218
Score = 158 (60.7 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
Identities = 60/198 (30%), Positives = 94/198 (47%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P ++ L ++QAA+G H L + + G Y++G + + G PE IL +
Sbjct: 32 PERLPGLCGKTVLQAALGTNHGLLLTEGGEVYSFGKLPW-RSG--PEEFCANSPILENTL 88
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG-----------QPWPPGDIKQISVP 173
+ Q V VAAG H+ +T G V+ WG QP+ P + + IS+
Sbjct: 89 -LGQH------VITVAAGSFHNGAVTEGGVVYMWGNNSSGQCAVANQPYVP-EPQPISIS 140
Query: 174 -VRVQGLEQVKLI--AVGAFHNLALQEDGALWAWGNN-EYGQLGTGDTQPRSQPIPVQGL 229
L V+++ A G H LAL +WAWG+ + G + T T P ++P V+ L
Sbjct: 141 DSETSPLLSVRVLQLACGEEHTLALSLSREIWAWGSGCQLGLITT--TFPVTKPQKVEHL 198
Query: 230 SGLTLVDIAAGGWHSTAL 247
+G ++ IA G +HS AL
Sbjct: 199 AGRVVLQIACGAYHSLAL 216
Score = 157 (60.3 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
Identities = 37/95 (38%), Positives = 54/95 (56%)
Query: 252 EVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFG 311
EV+ WGRG+ G+LG GD ++ P V L G++++Q+S GG HS+ALT ++S+G
Sbjct: 522 EVWSWGRGKDGQLGHGD--VLPRLQPLCVKSLDGKEVIQLSAGGHHSLALTAKSQVYSWG 579
Query: 312 RGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGV 346
G+LG+ T P VP + GDGV
Sbjct: 580 SNIFGQLGH-----TNSPTTVP---RLAKVCGDGV 606
Score = 145 (56.1 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 44/140 (31%), Positives = 65/140 (46%)
Query: 63 NIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRR 122
N P N L ++ A G +H AV + G Y WG N GQC + + +
Sbjct: 80 NSPILENTLLGQHVITVAAGSFHNGAVTEGGVVYMWGNNSSGQCAVANQPYVPEPQPIS- 138
Query: 123 DIVIPQRCAPKLIVR--QVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQ---ISVPVRVQ 177
+ +P L VR Q+A G H++ L+ +W WG G I ++ P +V+
Sbjct: 139 --ISDSETSPLLSVRVLQLACGEEHTLALSLSREIWAWGSGCQLGLITTTFPVTKPQKVE 196
Query: 178 GLE-QVKL-IAVGAFHNLAL 195
L +V L IA GA+H+LAL
Sbjct: 197 HLAGRVVLQIACGAYHSLAL 216
Score = 38 (18.4 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 5/16 (31%), Positives = 8/16 (50%)
Query: 7 IIAWGSGEDGQLGIGN 22
+ WG+ GQ + N
Sbjct: 112 VYMWGNNSSGQCAVAN 127
>ASPGD|ASPL0000064315 [details] [associations]
symbol:rcc1 species:162425 "Emericella nidulans"
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0006406
"mRNA export from nucleus" evidence=IEA] [GO:0006407 "rRNA export
from nucleus" evidence=IEA] [GO:0000054 "ribosomal subunit export
from nucleus" evidence=IEA] [GO:0031291 "Ran protein signal
transduction" evidence=IEA] [GO:0042992 "negative regulation of
transcription factor import into nucleus" evidence=IEA] [GO:1901673
"regulation of spindle assembly involved in mitosis" evidence=IEA]
[GO:0060623 "regulation of chromosome condensation" evidence=IEA]
[GO:0007093 "mitotic cell cycle checkpoint" evidence=IEA]
[GO:0030071 "regulation of mitotic metaphase/anaphase transition"
evidence=IEA] [GO:0032888 "regulation of mitotic spindle
elongation" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:BN001304
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AACD01000117 eggNOG:COG5184 OMA:PFEAIWA HOGENOM:HOG000170207
OrthoDB:EOG466ZVF RefSeq:XP_664582.1 ProteinModelPortal:Q5AXK2
STRING:Q5AXK2 EnsemblFungi:CADANIAT00000503 GeneID:2870170
KEGG:ani:AN6978.2 Uniprot:Q5AXK2
Length = 533
Score = 250 (93.1 bits), Expect = 4.8e-19, P = 4.8e-19
Identities = 112/388 (28%), Positives = 168/388 (43%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKA--LEPYK------VRSVVAGSRNSLAICDDG 57
++ G G G+LG+G + V VK L P+ V V G + +A+ D
Sbjct: 111 NVYVCGEGSSGELGLGVGKN---VIDVKRPRLNPHLLPDDVGVVQVAVGGMHCVALTHDN 167
Query: 58 KTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTG 117
K T + Q AL + GG+ D R + + + D
Sbjct: 168 KVLTWGVNDQ-GALGRDTTWE---GGYK----DMDNR------DSDSDSDSDSDDNPDLN 213
Query: 118 RILRRDIVIPQRCAPK-LIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRV 176
IP P ++ +VAAG + S LT EG V+ WG I +V
Sbjct: 214 PHECTPTAIPSSAFPHGTVIVEVAAGDSSSFALTDEGQVYGWGTFRSNDGILGFDAKTKV 273
Query: 177 Q-------GLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGL 229
Q L+++K + G H LAL + GA+ +WG+ + QLG + R++ +Q
Sbjct: 274 QTTPKLLPDLKKIKHLVCGDNHVLALNDKGAVLSWGSGQQNQLGRRIIE-RNKLNGLQPR 332
Query: 230 S-GLT--LVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDN--DKSSKMV-PQKVNLL 283
GL +V I AG +HS A+ G+V+ WG G G +N D + +V P V+ L
Sbjct: 333 EFGLPKGIVHIGAGAFHSFAVHQSGKVFAWGLNSFGETGIRENAGDSEAAIVHPTVVDSL 392
Query: 284 AGEDIVQVSCGGTH-SVALTRDGHIFSFGRGDHGRLGY--GRKVTTGQPMEVPINIPA-- 338
+ +++ Q+ CGG H S+A T+DG +GR D GY G K+ T P + I
Sbjct: 393 SKKNVTQI-CGGAHHSIAATQDGECLVWGRLD----GYQTGLKIDT-LPDDAVIKDERDR 446
Query: 339 PRNAGDGVDRRWI-AKLVACGGRHTLAI 365
PR + I AK VA G H++AI
Sbjct: 447 PRILIEPTAVPGIKAKAVAAGSDHSIAI 474
Score = 207 (77.9 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 88/343 (25%), Positives = 139/343 (40%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKTENIPS 66
++ WG + G LG + W K ++ S + + + IPS
Sbjct: 169 VLTWGVNDQGALG----RDTTWEGGYKDMDNRDSDSDSDSDSDDNPDLNPHECTPTAIPS 224
Query: 67 QVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVI 126
T IV+ A G A+ D+G+ Y WG R +D G IL D
Sbjct: 225 SAFP-HGTVIVEVAAGDSSSFALTDEGQVYGWG----------TFRSND-G-ILGFDAKT 271
Query: 127 PQRCAPKLI-----VRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEQ 181
+ PKL+ ++ + G H + L +G V +WG ++I ++ GL+
Sbjct: 272 KVQTTPKLLPDLKKIKHLVCGDNHVLALNDKGAVLSWGSGQQNQLGRRIIERNKLNGLQP 331
Query: 182 VKL--------IAVGAFHNLALQEDGALWAWGNNEYGQLG----TGDTQPRS-QPIPVQG 228
+ I GAFH+ A+ + G ++AWG N +G+ G GD++ P V
Sbjct: 332 REFGLPKGIVHIGAGAFHSFAVHQSGKVFAWGLNSFGETGIRENAGDSEAAIVHPTVVDS 391
Query: 229 LSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFG-D---ND---KSSKMVPQ--- 278
LS + I G HS A T DGE WGR + + G D +D K + P+
Sbjct: 392 LSKKNVTQICGGAHHSIAATQDGECLVWGRLDGYQTGLKIDTLPDDAVIKDERDRPRILI 451
Query: 279 KVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYG 321
+ + G V+ G HS+A+ G +S+G + G G
Sbjct: 452 EPTAVPGIKAKAVAAGSDHSIAIDTSGRPWSWGFSATYQTGQG 494
>RGD|1306897 [details] [associations]
symbol:Nek8 "NIMA-related kinase 8" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA;ISO] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 RGD:1306897 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
PRINTS:PR00633 PROSITE:PS50012 EMBL:CH473948 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 OrthoDB:EOG4PZJ65
IPI:IPI00369945 RefSeq:NP_001099274.1 UniGene:Rn.144705
Ensembl:ENSRNOT00000017264 GeneID:287473 KEGG:rno:287473
NextBio:626264 Uniprot:D3ZGQ5
Length = 698
Score = 249 (92.7 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 72/209 (34%), Positives = 101/209 (48%)
Query: 126 IPQRCA-PKLIVRQVAAGGTHSVVLTREGHVWTWGQPWP---------PG--DIKQISVP 173
IP R P V QVAAG T +TR G + W P P PG ++ Q
Sbjct: 329 IPLRLPMPNTEVVQVAAGRTQKAGVTRSGRLILWEAP-PLGTGGGTLLPGAVELPQPQFV 387
Query: 174 VR-VQGLEQV--KLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLS 230
R ++G V K +A G L + G + +G+ G LG G SQP V+ L
Sbjct: 388 SRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALL 447
Query: 231 GLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQ 290
G +V +A G H AL+ DGE++ WGRG+ GRLG G + S PQ+V ++ G++ +
Sbjct: 448 GYEMVQVACGASHVLALSADGELFAWGRGDGGRLGLGTRE--SHNCPQQVPMVPGQEAQR 505
Query: 291 VSCGGTHSVALTRDGHIFSFGRGDHGRLG 319
V CG S+ LT G + + G +LG
Sbjct: 506 VVCGIDCSMILTSPGRVLACGSNRFNKLG 534
Score = 236 (88.1 bits), Expect = 4.4e-17, P = 4.4e-17
Identities = 65/204 (31%), Positives = 103/204 (50%)
Query: 170 ISVPVRV-QGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIP--- 225
+S+P+R+ +V +A G + G L W G G G P + +P
Sbjct: 327 LSIPLRLPMPNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGT-GGGTLLPGAVELPQPQ 385
Query: 226 -----VQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV 280
++G SG+T+ +A G + LTD G + +G G +G LG G S+ P V
Sbjct: 386 FVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQ--PTIV 443
Query: 281 NLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP- 339
L G ++VQV+CG +H +AL+ DG +F++GRGD GRLG G + + P +VP+ +P
Sbjct: 444 EALLGYEMVQVACGASHVLALSADGELFAWGRGDGGRLGLGTRESHNCPQQVPM-VPGQE 502
Query: 340 -RNAGDGVDRRWI----AKLVACG 358
+ G+D I +++ACG
Sbjct: 503 AQRVVCGIDCSMILTSPGRVLACG 526
Score = 232 (86.7 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 74/243 (30%), Positives = 118/243 (48%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG----EE---PERKDDT- 116
P+ V AL ++VQ A G H LA+ G +AWG + G+ G E P++
Sbjct: 440 PTIVEALLGYEMVQVACGASHVLALSADGELFAWGRGDGGRLGLGTRESHNCPQQVPMVP 499
Query: 117 GRILRRDIVIPQRCAPKLIV--RQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQ-IS-V 172
G+ +R +V C+ L R +A G L + + +P P +++ +S
Sbjct: 500 GQEAQR-VVCGIDCSMILTSPGRVLACGSNRFNKLGLDC-LSLEEEPVPHQQVEEALSFT 557
Query: 173 PVRVQGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLS 230
P+ L++ L+ V G H+ A+ GA + +G+N++GQLGT + P VQGL
Sbjct: 558 PLGSAPLDRETLLCVDLGTAHSAAVTASGACYTFGSNQHGQLGTSSRRVSRAPCRVQGLE 617
Query: 231 GLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQ 290
G+ +V +A G + A+ +GEVY WG+G GRLG D D P +++ +
Sbjct: 618 GIKMVMVACGDAFTVAIGAEGEVYSWGKGARGRLGRRDEDAGLPR-PVQLDETHPYTVTS 676
Query: 291 VSC 293
VSC
Sbjct: 677 VSC 679
Score = 179 (68.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 55/182 (30%), Positives = 88/182 (48%)
Query: 172 VPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQ---- 227
VP+ V G E +++ G ++ L G + A G+N + +LG +P+P Q
Sbjct: 495 VPM-VPGQEAQRVVC-GIDCSMILTSPGRVLACGSNRFNKLGLDCLSLEEEPVPHQQVEE 552
Query: 228 -------GLSGL---TLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVP 277
G + L TL+ + G HS A+T G Y +G +HG+LG + + P
Sbjct: 553 ALSFTPLGSAPLDRETLLCVDLGTAHSAAVTASGACYTFGSNQHGQLG--TSSRRVSRAP 610
Query: 278 QKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIP 337
+V L G +V V+CG +VA+ +G ++S+G+G GRLG R G P V ++
Sbjct: 611 CRVQGLEGIKMVMVACGDAFTVAIGAEGEVYSWGKGARGRLGR-RDEDAGLPRPVQLDET 669
Query: 338 AP 339
P
Sbjct: 670 HP 671
Score = 169 (64.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 65/232 (28%), Positives = 96/232 (41%)
Query: 63 NIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRR 122
+IP ++ + NT++VQ A G V GR W G G G +L
Sbjct: 328 SIPLRL-PMPNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGTGG---------GTLLPG 377
Query: 123 DIVIPQ-RCAPKLI-------VRQVAAGGTHSVVLTREGHVWTWGQP----WPPGDIKQI 170
+ +PQ + + + ++ VA G + LT G + T+G G + I
Sbjct: 378 AVELPQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLTDI 437
Query: 171 SVPVRVQ---GLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQ 227
S P V+ G E V+ +A GA H LAL DG L+AWG + G+LG G + + P V
Sbjct: 438 SQPTIVEALLGYEMVQ-VACGASHVLALSADGELFAWGRGDGGRLGLGTRESHNCPQQVP 496
Query: 228 GLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 279
+ G + G S LT G V G +LG + VP +
Sbjct: 497 MVPGQEAQRVVCGIDCSMILTSPGRVLACGSNRFNKLGLDCLSLEEEPVPHQ 548
>UNIPROTKB|E9PMV6 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00976302 ProteinModelPortal:E9PMV6 SMR:E9PMV6
Ensembl:ENST00000529728 ArrayExpress:E9PMV6 Bgee:E9PMV6
Uniprot:E9PMV6
Length = 229
Score = 227 (85.0 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 67/194 (34%), Positives = 97/194 (50%)
Query: 148 VLTREGHVWT-----WGQPWPPGDIKQISVPVRVQ-GLEQVKLIAVGAFHNLALQEDGAL 201
+LT G V + +GQ P ++ VP ++ E+V IA G H +A G +
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIV 60
Query: 202 WAWGNN--EYGQ-LGTGDTQP----RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVY 254
+ WG G+ L G T P +P V GL + + AG HS +LTD GEVY
Sbjct: 61 FQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVY 120
Query: 255 GWGRGEHGRLGFGDNDKSSKMVPQKV--NLLAGEDIVQVSCGGTHSVALTRDGHIFSFGR 312
WG +HG+L N+ + VPQK+ + E + + G TH VA T G +F++GR
Sbjct: 121 VWGSNKHGQLA---NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGR 177
Query: 313 GDHGRLGYGRKVTT 326
D+G+LG RK+ T
Sbjct: 178 ADYGQLG--RKLET 189
Score = 178 (67.7 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 58/190 (30%), Positives = 86/190 (45%)
Query: 91 DQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCA-PKLIVRQVAAGGTHSVVL 149
+ G+ + G N +GQ G P R V+PQ K V +AAG H+V
Sbjct: 4 ENGQVLSCGSNSFGQLGV-PHGP--------RRCVVPQAIELHKEKVVCIAAGLRHAVAA 54
Query: 150 TREGHVWTWGQPWP-------PGDIKQI----SVPVRVQGLEQVKLIAV--GAFHNLALQ 196
T G V+ WG PG + P RV GLE K + V G+ H+ +L
Sbjct: 55 TASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLT 114
Query: 197 EDGALWAWGNNEYGQLGTGDT-QPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYG 255
+ G ++ WG+N++GQL P Q I + I +G H A T+ G+++
Sbjct: 115 DAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFT 174
Query: 256 WGRGEHGRLG 265
WGR ++G+LG
Sbjct: 175 WGRADYGQLG 184
Score = 123 (48.4 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 31/100 (31%), Positives = 43/100 (43%)
Query: 61 TENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRIL 120
T PS+V L N+K + G H ++ D G Y WG N++GQ E L
Sbjct: 85 TAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANE-------AAFL 137
Query: 121 RRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ 160
I C V + +G TH V T G ++TWG+
Sbjct: 138 PVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGR 177
Score = 122 (48.0 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 46/162 (28%), Positives = 66/162 (40%)
Query: 64 IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRD 123
+P + L K+V A G H +A G + WG CG R+ G+ L
Sbjct: 30 VPQAIE-LHKEKVVCIAAGLRHAVAATASGIVFQWGTG-LASCG----RRLCPGQTLPLF 83
Query: 124 IVI--PQRCA--PKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQ----ISVPVR 175
P R V AG HS LT G V+ WG G + + VP +
Sbjct: 84 FTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSN-KHGQLANEAAFLPVPQK 142
Query: 176 VQG--LEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLG 213
++ + K+ A+ G H +A E G ++ WG +YGQLG
Sbjct: 143 IEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG 184
Score = 63 (27.2 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVV-KALEPYK--VRSVVAGSRNSLAICDDG 57
+++ GS GQLG+ + R CVV +A+E +K V + AG R+++A G
Sbjct: 8 VLSCGSNSFGQLGVPHGPRR---CVVPQAIELHKEKVVCIAAGLRHAVAATASG 58
>UNIPROTKB|Q83CB0 [details] [associations]
symbol:CBU_1217 "Hypothetical membrane spanning protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE016828
GenomeReviews:AE016828_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG
RefSeq:NP_820212.1 ProteinModelPortal:Q83CB0 GeneID:1209121
KEGG:cbu:CBU_1217 PATRIC:17931169 HOGENOM:HOG000029001
ProtClustDB:CLSK914618 BioCyc:CBUR227377:GJ7S-1203-MONOMER
Uniprot:Q83CB0
Length = 497
Score = 240 (89.5 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 89/306 (29%), Positives = 141/306 (46%)
Query: 59 TKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG--EEPERKDDT 116
T++E I + L N IVQ H + ++G Y WG N G+ G + ER T
Sbjct: 164 TRSEFIQHRHYEL-NVTIVQLLSDYRHAFILTEEGGIYGWGFNISGELGLGDRFERSQPT 222
Query: 117 GRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPP--G-DIKQISV- 172
+ +R +++ Q+ + V T +GHV+ WG + G D +Q +
Sbjct: 223 ELPQNFFPYLLER-GDRIV--QLNFADRYLVARTAQGHVYVWGFNYRGRLGLDDEQDRLH 279
Query: 173 PVRVQGL--------EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQP- 223
PV + + + + VG H LAL + G ++AWG N YGQLG D Q R++P
Sbjct: 280 PVELSWDFFPEWHPDDYIIQVVVGDRHTLALTQLGYIYAWGKNSYGQLGFRDQQDRNRPA 339
Query: 224 -IPVQGLSGLT-----LVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVP 277
+P GL ++++ AGG S A T+ G +Y WG L GD + +
Sbjct: 340 LLPWNRFPGLLERNDRIIELIAGGARSLARTEQGFIYIWGA--RWLLVRGDPEFRHHPML 397
Query: 278 QKVNLLAG-----EDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
N G + +V++ G H++A T G+I+++GR +G+LG G + QP +
Sbjct: 398 LTENYFPGLRRRGDHLVELIAGPDHTLARTEQGYIYAWGRNYYGQLGLGDRRIQRQPALL 457
Query: 333 PIN-IP 337
N IP
Sbjct: 458 DPNAIP 463
Score = 153 (58.9 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 45/141 (31%), Positives = 73/141 (51%)
Query: 232 LTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKM--VPQKV--NLLA-GE 286
+T+V + + H+ LT++G +YGWG G LG GD + S+ +PQ LL G+
Sbjct: 178 VTIVQLLSDYRHAFILTEEGGIYGWGFNISGELGLGDRFERSQPTELPQNFFPYLLERGD 237
Query: 287 DIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGV 346
IVQ++ + VA T GH++ +G GRLG + P+E+ + + D
Sbjct: 238 RIVQLNFADRYLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELSWDFFPEWHPDD-- 295
Query: 347 DRRWIAKLVACGGRHTLAIVE 367
+I ++V G RHTLA+ +
Sbjct: 296 ---YIIQVVV-GDRHTLALTQ 312
Score = 44 (20.5 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 145 HSVVLTREGHVWTWGQPWPP----GDIKQISVPVRV 176
+S+V VW WG + G+I +++ P R+
Sbjct: 79 YSLVWIARAGVWGWGNNYTGQLDFGNIHEMTKPARI 114
Score = 43 (20.2 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 10 WGSGEDGQLGIGNNEE 25
WG+ GQL GN E
Sbjct: 92 WGNNYTGQLDFGNIHE 107
>TIGR_CMR|CBU_1217 [details] [associations]
symbol:CBU_1217 "hypothetical protein" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG RefSeq:NP_820212.1
ProteinModelPortal:Q83CB0 GeneID:1209121 KEGG:cbu:CBU_1217
PATRIC:17931169 HOGENOM:HOG000029001 ProtClustDB:CLSK914618
BioCyc:CBUR227377:GJ7S-1203-MONOMER Uniprot:Q83CB0
Length = 497
Score = 240 (89.5 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 89/306 (29%), Positives = 141/306 (46%)
Query: 59 TKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG--EEPERKDDT 116
T++E I + L N IVQ H + ++G Y WG N G+ G + ER T
Sbjct: 164 TRSEFIQHRHYEL-NVTIVQLLSDYRHAFILTEEGGIYGWGFNISGELGLGDRFERSQPT 222
Query: 117 GRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPP--G-DIKQISV- 172
+ +R +++ Q+ + V T +GHV+ WG + G D +Q +
Sbjct: 223 ELPQNFFPYLLER-GDRIV--QLNFADRYLVARTAQGHVYVWGFNYRGRLGLDDEQDRLH 279
Query: 173 PVRVQGL--------EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQP- 223
PV + + + + VG H LAL + G ++AWG N YGQLG D Q R++P
Sbjct: 280 PVELSWDFFPEWHPDDYIIQVVVGDRHTLALTQLGYIYAWGKNSYGQLGFRDQQDRNRPA 339
Query: 224 -IPVQGLSGLT-----LVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVP 277
+P GL ++++ AGG S A T+ G +Y WG L GD + +
Sbjct: 340 LLPWNRFPGLLERNDRIIELIAGGARSLARTEQGFIYIWGA--RWLLVRGDPEFRHHPML 397
Query: 278 QKVNLLAG-----EDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
N G + +V++ G H++A T G+I+++GR +G+LG G + QP +
Sbjct: 398 LTENYFPGLRRRGDHLVELIAGPDHTLARTEQGYIYAWGRNYYGQLGLGDRRIQRQPALL 457
Query: 333 PIN-IP 337
N IP
Sbjct: 458 DPNAIP 463
Score = 153 (58.9 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 45/141 (31%), Positives = 73/141 (51%)
Query: 232 LTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKM--VPQKV--NLLA-GE 286
+T+V + + H+ LT++G +YGWG G LG GD + S+ +PQ LL G+
Sbjct: 178 VTIVQLLSDYRHAFILTEEGGIYGWGFNISGELGLGDRFERSQPTELPQNFFPYLLERGD 237
Query: 287 DIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGV 346
IVQ++ + VA T GH++ +G GRLG + P+E+ + + D
Sbjct: 238 RIVQLNFADRYLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELSWDFFPEWHPDD-- 295
Query: 347 DRRWIAKLVACGGRHTLAIVE 367
+I ++V G RHTLA+ +
Sbjct: 296 ---YIIQVVV-GDRHTLALTQ 312
Score = 44 (20.5 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 145 HSVVLTREGHVWTWGQPWPP----GDIKQISVPVRV 176
+S+V VW WG + G+I +++ P R+
Sbjct: 79 YSLVWIARAGVWGWGNNYTGQLDFGNIHEMTKPARI 114
Score = 43 (20.2 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 10 WGSGEDGQLGIGNNEE 25
WG+ GQL GN E
Sbjct: 92 WGNNYTGQLDFGNIHE 107
>TAIR|locus:2035423 [details] [associations]
symbol:AT1G19880 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OMA:FGENKLG
IPI:IPI00543359 RefSeq:NP_173417.2 UniGene:At.16200
ProteinModelPortal:F4HQZ1 SMR:F4HQZ1 PRIDE:F4HQZ1
EnsemblPlants:AT1G19880.1 GeneID:838576 KEGG:ath:AT1G19880
Uniprot:F4HQZ1
Length = 538
Score = 239 (89.2 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 67/205 (32%), Positives = 104/205 (50%)
Query: 173 PVRVQGLE--QVKLIAVG--AFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQG 228
P R++ L ++ +A G +FH +AL +G + WG NE GQLG GD R +P V G
Sbjct: 47 PTRLRPLVGVNIRFVATGCASFHCVALDVEGRCYTWGRNEKGQLGHGDMIQRDRPTVVSG 106
Query: 229 LSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDK---SSKMVPQKVNLLAG 285
LS +V AAG H+ ++DDG+ G+G ++G+LG G S ++ + +
Sbjct: 107 LSKHKIVKAAAGRNHTVVVSDDGQSLGFGWNKYGQLGLGSAKNGFVSVEVESTPLPCVVS 166
Query: 286 EDIVQVSCGGTHSVAL--TRDGHIFSFGRGDHGRLGYGRKVTTG-QPMEVPINIPA-PR- 340
+++ V+CG +V L T I + G +G+LG+G + V + A PR
Sbjct: 167 DEVTNVACGADFTVWLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRP 226
Query: 341 NAGDGVDRRWIAKLVACGGRHTLAI 365
A + I K VACG HT+A+
Sbjct: 227 KAIASLAGETIVK-VACGTNHTVAV 250
Score = 194 (73.4 bits), Expect = 2.6e-18, Sum P(3) = 2.6e-18
Identities = 56/195 (28%), Positives = 93/195 (47%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTG--RI--L 120
P + +L+ IV+ A G H +AVD G Y WG YG+ G E+KD+ RI
Sbjct: 226 PKAIASLAGETIVKVACGTNHTVAVDKNGYVYTWGFGGYGRLGHR-EQKDEWAPRRIDVF 284
Query: 121 RRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLE 180
+R+ V+P P I+ +AG +S G ++ WG+ GD P+
Sbjct: 285 QRNNVLP----PNAIL---SAGSANSACTAGGGQLYMWGKIKNNGDDWMYPKPMMDLSGW 337
Query: 181 QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIP--VQGLSGLTLVDIA 238
++ + G+ H+ + D + +WG+ +YG+LG G +S P V L G+ ++ +A
Sbjct: 338 NLRWMDSGSMHHF-VGADSSCISWGHAQYGELGYGPNGQKSSAAPKKVDMLEGMHVMGVA 396
Query: 239 AGGWHSTALTDDGEV 253
G HS + D ++
Sbjct: 397 CGFCHSMVIVDRTDI 411
Score = 192 (72.6 bits), Expect = 7.2e-18, Sum P(2) = 7.2e-18
Identities = 62/220 (28%), Positives = 99/220 (45%)
Query: 102 EYGQCGE----EPERKDDTGRILRRDIVIPQRCAP---KLIVRQVAAGGTHSVVLTREGH 154
+YGQ G E KD + R+ P+ A + IV+ VA G H+V + + G+
Sbjct: 197 QYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKAIASLAGETIVK-VACGTNHTVAVDKNGY 255
Query: 155 VWTWG-------------QPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGAL 201
V+TWG W P ++I V R L +++ G+ ++ G L
Sbjct: 256 VYTWGFGGYGRLGHREQKDEWAP---RRIDVFQRNNVLPPNAILSAGSANSACTAGGGQL 312
Query: 202 WAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEH 261
+ WG + GD P P+ LSG L + +G H D + WG ++
Sbjct: 313 YMWGKIK----NNGDDW--MYPKPMMDLSGWNLRWMDSGSMHHFVGADSSCI-SWGHAQY 365
Query: 262 GRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVAL 301
G LG+G N + S P+KV++L G ++ V+CG HS+ +
Sbjct: 366 GELGYGPNGQKSSAAPKKVDMLEGMHVMGVACGFCHSMVI 405
Score = 142 (55.0 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 49/169 (28%), Positives = 81/169 (47%)
Query: 196 QEDGALW-AWGNNEYGQLGTG--DTQPRSQPIPVQGLSGLTLVDIAAGG----WHSTALT 248
Q G W +G G G + S P+P +T ++A G W S+ T
Sbjct: 130 QSLGFGWNKYGQLGLGSAKNGFVSVEVESTPLPCVVSDEVT--NVACGADFTVWLSS--T 185
Query: 249 DDGEVYGWGRGEHGRLGFG-DN-----DKSSKMV------PQKVNLLAGEDIVQVSCGGT 296
+ + G ++G+LG G DN D S ++ P+ + LAGE IV+V+CG
Sbjct: 186 EGASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKAIASLAGETIVKVACGTN 245
Query: 297 HSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPI---NIPAPRNA 342
H+VA+ ++G+++++G G +GRLG+ + P + + N P NA
Sbjct: 246 HTVAVDKNGYVYTWGFGGYGRLGHREQKDEWAPRRIDVFQRNNVLPPNA 294
Score = 139 (54.0 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 48/192 (25%), Positives = 87/192 (45%)
Query: 180 EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVD--- 236
E + +A G H +A+ ++G ++ WG YG+LG + + P + ++
Sbjct: 235 ETIVKVACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKDEWAPRRIDVFQRNNVLPPNA 294
Query: 237 -IAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGG 295
++AG +S G++Y WG+ ++ GD+ M P+ + L+G ++ + G
Sbjct: 295 ILSAGSANSACTAGGGQLYMWGKIKNN----GDD----WMYPKPMMDLSGWNLRWMDSGS 346
Query: 296 THSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLV 355
H + D S+G +G LGYG GQ AP+ D ++ + V
Sbjct: 347 MHHF-VGADSSCISWGHAQYGELGYG---PNGQKSSA-----APKKV-DMLEGMHVMG-V 395
Query: 356 ACGGRHTLAIVE 367
ACG H++ IV+
Sbjct: 396 ACGFCHSMVIVD 407
Score = 136 (52.9 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 50/159 (31%), Positives = 75/159 (47%)
Query: 73 NTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRD--IVIPQRC 130
N + V +HC+A+D +GR Y WG NE GQ G G +++RD V+
Sbjct: 57 NIRFVATGCASFHCVALDVEGRCYTWGRNEKGQLGH--------GDMIQRDRPTVVSGLS 108
Query: 131 APKLIVRQVAAGGTHSVVLTREGHV----WT-WGQPWPPGDIKQISVPVRVQGL------ 179
K++ + AAG H+VV++ +G W +GQ G K V V V+
Sbjct: 109 KHKIV--KAAAGRNHTVVVSDDGQSLGFGWNKYGQ-LGLGSAKNGFVSVEVESTPLPCVV 165
Query: 180 -EQVKLIAVGAFHNLALQE-DGA-LWAWGNNEYGQLGTG 215
++V +A GA + L +GA + G +YGQLG G
Sbjct: 166 SDEVTNVACGADFTVWLSSTEGASILTAGLPQYGQLGHG 204
Score = 103 (41.3 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 37/116 (31%), Positives = 51/116 (43%)
Query: 48 RNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 107
RN G + P+ V+ LS KIV+AA G H + V D G++ +G N+YGQ G
Sbjct: 84 RNEKGQLGHGDMIQRDRPTVVSGLSKHKIVKAAAGRNHTVVVSDDGQSLGFGWNKYGQLG 143
Query: 108 EEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTR-EG-HVWTWGQP 161
+ G + P C V VA G +V L+ EG + T G P
Sbjct: 144 LGSAKN---GFVSVEVESTPLPCVVSDEVTNVACGADFTVWLSSTEGASILTAGLP 196
Score = 95 (38.5 bits), Expect = 2.6e-18, Sum P(3) = 2.6e-18
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 10 WGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKT 59
WG E GQLG G+ +R+ VV L +K+ AG +++ + DDG++
Sbjct: 82 WGRNEKGQLGHGDMIQRDRPTVVSGLSKHKIVKAAAGRNHTVVVSDDGQS 131
Score = 39 (18.8 bits), Expect = 1.4e-12, Sum P(3) = 1.4e-12
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 1 MAST--TSIIAWGSGEDGQLGIGNNEE 25
++ST SI+ G + GQLG G + E
Sbjct: 182 LSSTEGASILTAGLPQYGQLGHGTDNE 208
Score = 38 (18.4 bits), Expect = 2.6e-18, Sum P(3) = 2.6e-18
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 255 GWGRGEHGRLGFGDNDKS 272
G GRG GR G N K+
Sbjct: 506 GRGRGARGRGGRTSNGKA 523
>ZFIN|ZDB-GENE-080929-1 [details] [associations]
symbol:als2b "amyotrophic lateral sclerosis 2b
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005543 "phospholipid
binding" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-080929-1 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 KO:K04575 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 EMBL:CU570787 EMBL:BX927225
EMBL:CU915284 IPI:IPI01024580 RefSeq:XP_002662342.2
UniGene:Dr.158633 Ensembl:ENSDART00000149896 GeneID:100318899
KEGG:dre:100318899 CTD:100318899 Uniprot:F8W4K3
Length = 1681
Score = 234 (87.4 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 61/187 (32%), Positives = 91/187 (48%)
Query: 127 PQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ-PWPPGDIKQISVPV--RVQGLEQVK 183
P+R V Q A G H V+L G V+++G+ PW P+ V ++V
Sbjct: 31 PERVLLSRPVLQAALGARHGVLLVEGGQVYSFGELPWKQNQTSSAE-PILEAVLSEQRVV 89
Query: 184 LIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSG-------LTLVD 236
+A G+ H+ + EDG + WG N +GQ G P PV L + +++
Sbjct: 90 FVAAGSAHSGVVTEDGGVHMWGENVHGQCGLLGLSVIPNPTPVGVLDSEATPPQTVKILE 149
Query: 237 IAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGT 296
+A G H+ AL+ EV+ WG G +LG + PQKV+ L+G ++QV+CG
Sbjct: 150 VACGDQHTLALSAKHEVWAWGSG--CQLGL-NTSTFPVWKPQKVDHLSGRHVLQVACGSA 206
Query: 297 HSVALTR 303
HSVAL R
Sbjct: 207 HSVALVR 213
Score = 181 (68.8 bits), Expect = 5.6e-12, Sum P(3) = 5.6e-12
Identities = 43/115 (37%), Positives = 62/115 (53%)
Query: 191 HNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDD 250
H +LQ + +W+WG + GQLG GD PR QP V+ L+G ++ +AAG HS ALT
Sbjct: 543 HLPSLQTE--VWSWGQGQDGQLGHGDLLPRLQPDCVKSLNGKEVLKVAAGAHHSLALTAQ 600
Query: 251 GEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDG 305
+V+ WG G+LG + +S PQ L G + + G H++ L DG
Sbjct: 601 SQVFSWGCNTSGQLG---HMESPTTFPQLTKLSDGIRVWDIGAGLQHTLLLA-DG 651
Score = 170 (64.9 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 60/203 (29%), Positives = 98/203 (48%)
Query: 171 SVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLS 230
+ P RV V A+GA H + L E G ++++G + Q T +P + + LS
Sbjct: 29 TAPERVLLSRPVLQAALGARHGVLLVEGGQVYSFGELPWKQNQTSSAEPILEAV----LS 84
Query: 231 GLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGE---- 286
+V +AAG HS +T+DG V+ WG HG+ G S P V +L E
Sbjct: 85 EQRVVFVAAGSAHSGVVTEDGGVHMWGENVHGQCGL--LGLSVIPNPTPVGVLDSEATPP 142
Query: 287 ---DIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAG 343
I++V+CG H++AL+ ++++G G +LG T+ P+ P +
Sbjct: 143 QTVKILEVACGDQHTLALSAKHEVWAWGSGC--QLGLN---TSTFPVWKPQKV------- 190
Query: 344 DGVDRRWIAKLVACGGRHTLAIV 366
D + R + + VACG H++A+V
Sbjct: 191 DHLSGRHVLQ-VACGSAHSVALV 212
Score = 162 (62.1 bits), Expect = 2.9e-18, Sum P(2) = 2.9e-18
Identities = 46/151 (30%), Positives = 75/151 (49%)
Query: 217 TQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMV 276
++PR + +P+ G+ D H +L EV+ WG+G+ G+LG GD ++
Sbjct: 523 SRPRMRAVPLAS-GGIPETDA-----HLPSLQT--EVWSWGQGQDGQLGHGD--LLPRLQ 572
Query: 277 PQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINI 336
P V L G+++++V+ G HS+ALT +FS+G G+LG+ ME P
Sbjct: 573 PDCVKSLNGKEVLKVAAGAHHSLALTAQSQVFSWGCNTSGQLGH---------MESPTTF 623
Query: 337 PAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
P DG+ R W + G +HTL + +
Sbjct: 624 PQLTKLSDGI-RVWD---IGAGLQHTLLLAD 650
Score = 145 (56.1 bits), Expect = 2.9e-18, Sum P(2) = 2.9e-18
Identities = 62/198 (31%), Positives = 95/198 (47%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P +V L + ++QAA+G H + + + G+ Y++G E P +++ T +
Sbjct: 31 PERV--LLSRPVLQAALGARHGVLLVEGGQVYSFG--------ELPWKQNQTSSA---EP 77
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGD--IKQISV-----PVRVQ 177
++ + + +V VAAG HS V+T +G V WG+ G + +SV PV V
Sbjct: 78 ILEAVLSEQRVVF-VAAGSAHSGVVTEDGGVHMWGEN-VHGQCGLLGLSVIPNPTPVGVL 135
Query: 178 GLEQ-----VKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTG-DTQPRSQPIPVQGL 229
E VK+ +A G H LAL +WAWG+ QLG T P +P V L
Sbjct: 136 DSEATPPQTVKILEVACGDQHTLALSAKHEVWAWGSG--CQLGLNTSTFPVWKPQKVDHL 193
Query: 230 SGLTLVDIAAGGWHSTAL 247
SG ++ +A G HS AL
Sbjct: 194 SGRHVLQVACGSAHSVAL 211
Score = 131 (51.2 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 42/130 (32%), Positives = 67/130 (51%)
Query: 132 PKLIVRQVAAGG---THSVVLTREGHVWTWGQPWPP----GDIKQISVPVRVQGL--EQV 182
P++ +A+GG T + + + + VW+WGQ GD+ P V+ L ++V
Sbjct: 525 PRMRAVPLASGGIPETDAHLPSLQTEVWSWGQGQDGQLGHGDLLPRLQPDCVKSLNGKEV 584
Query: 183 KLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGW 242
+A GA H+LAL +++WG N GQLG ++ P + P + G+ + DI AG
Sbjct: 585 LKVAAGAHHSLALTAQSQVFSWGCNTSGQLGHMES-PTTFPQLTKLSDGIRVWDIGAGLQ 643
Query: 243 HSTALTDDGE 252
H T L DG+
Sbjct: 644 H-TLLLADGD 652
Score = 62 (26.9 bits), Expect = 5.6e-12, Sum P(3) = 5.6e-12
Identities = 24/88 (27%), Positives = 37/88 (42%)
Query: 64 IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRD 123
+ S+ KI++ A G H LA+ + +AWG Q G T + +
Sbjct: 135 LDSEATPPQTVKILEVACGDQHTLALSAKHEVWAWGSG--CQLG----LNTSTFPVWKPQ 188
Query: 124 IVIPQRCAPKLIVRQVAAGGTHSVVLTR 151
V + + ++ QVA G HSV L R
Sbjct: 189 KV--DHLSGRHVL-QVACGSAHSVALVR 213
Score = 44 (20.5 bits), Expect = 5.6e-12, Sum P(3) = 5.6e-12
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 16 GQLGIGNNEEREWVCVVKA-LEPYKVRSVVAGSRNSLAICDDGKTKT--ENIPSQVNAL 71
G+L N+ +++A L +V V AGS +S + +DG EN+ Q L
Sbjct: 63 GELPWKQNQTSSAEPILEAVLSEQRVVFVAAGSAHSGVVTEDGGVHMWGENVHGQCGLL 121
>MGI|MGI:1890646 [details] [associations]
symbol:Nek8 "NIMA (never in mitosis gene a)-related
expressed kinase 8" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0072372 "primary
cilium" evidence=IDA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 MGI:MGI:1890646 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 GO:GO:0005737 GO:GO:0005856 GO:GO:0046872
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 HOGENOM:HOG000006908
HOVERGEN:HBG098799 OMA:EREVFAW OrthoDB:EOG4PZJ65 EMBL:AF407579
EMBL:AK154358 EMBL:BC070457 IPI:IPI00135930 RefSeq:NP_543125.1
UniGene:Mm.23788 ProteinModelPortal:Q91ZR4 SMR:Q91ZR4 IntAct:Q91ZR4
MINT:MINT-1341145 STRING:Q91ZR4 PhosphoSite:Q91ZR4 PRIDE:Q91ZR4
Ensembl:ENSMUST00000017549 GeneID:140859 KEGG:mmu:140859
InParanoid:Q91ZR4 NextBio:370021 Bgee:Q91ZR4 Genevestigator:Q91ZR4
GermOnline:ENSMUSG00000017405 Uniprot:Q91ZR4
Length = 698
Score = 244 (91.0 bits), Expect = 4.9e-18, P = 4.9e-18
Identities = 68/198 (34%), Positives = 97/198 (48%)
Query: 136 VRQVAAGGTHSVVLTREGHVWTWGQPWP---------PG--DIKQISVPVR-VQGLEQV- 182
V QVAAG T +TR G + W P P PG ++ Q R ++G V
Sbjct: 340 VVQVAAGRTQKAGVTRSGRLILWEAP-PLGAGGGTLLPGAVELPQPQFVSRFLEGQSGVT 398
Query: 183 -KLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGG 241
K +A G L + G + +G+ G LG G+ SQP V+ L G +V +A G
Sbjct: 399 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACGA 458
Query: 242 WHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVAL 301
H AL+ DGE++ WGRG+ GRLG G + S PQ+V + G++ +V CG S+ L
Sbjct: 459 SHVLALSTDGELFAWGRGDGGRLGLGTRE--SHNCPQQVPVAPGQEAQRVVCGIDSSMIL 516
Query: 302 TRDGHIFSFGRGDHGRLG 319
T G + + G +LG
Sbjct: 517 TSPGRVLACGSNRFNKLG 534
Score = 238 (88.8 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 67/206 (32%), Positives = 103/206 (50%)
Query: 170 ISVPVRVQGLE-QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIP--- 225
+S P+R+ L +V +A G + G L W G G G P + +P
Sbjct: 327 LSSPLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGA-GGGTLLPGAVELPQPQ 385
Query: 226 -----VQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV 280
++G SG+T+ +A G + LTD G + +G G +G LG G+ S+ P V
Sbjct: 386 FVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQ--PTIV 443
Query: 281 NLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPR 340
L G ++VQV+CG +H +AL+ DG +F++GRGD GRLG G + + P +VP+ AP
Sbjct: 444 EALLGYEMVQVACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPV---APG 500
Query: 341 NAGD----GVDRRWI----AKLVACG 358
G+D I +++ACG
Sbjct: 501 QEAQRVVCGIDSSMILTSPGRVLACG 526
Score = 233 (87.1 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 75/244 (30%), Positives = 116/244 (47%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG----EE---PERKDDT- 116
P+ V AL ++VQ A G H LA+ G +AWG + G+ G E P++
Sbjct: 440 PTIVEALLGYEMVQVACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPVAP 499
Query: 117 GRILRRDIV-IPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQ-IS-VP 173
G+ +R + I R +A G L + H+ +P P +++ +S P
Sbjct: 500 GQEAQRVVCGIDSSMILTSPGRVLACGSNRFNKLGLD-HLSLDEEPVPYQQVEEALSFTP 558
Query: 174 VRVQGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSG 231
+ L+Q L+ V G H+ A+ G + +G+N++GQLGT + P VQGL G
Sbjct: 559 LGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEG 618
Query: 232 LTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGED--IV 289
+ +V +A G + A+ +GEVY WG+G GRLG D D +P+ V L +
Sbjct: 619 IKMVMVACGDAFTVAVGAEGEVYSWGKGTRGRLGRRDEDAG---LPRPVQLDETHPYMVT 675
Query: 290 QVSC 293
VSC
Sbjct: 676 SVSC 679
Score = 181 (68.8 bits), Expect = 8.5e-11, P = 8.5e-11
Identities = 55/182 (30%), Positives = 87/182 (47%)
Query: 172 VPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQ---- 227
VPV G E +++ G ++ L G + A G+N + +LG +P+P Q
Sbjct: 495 VPV-APGQEAQRVVC-GIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEE 552
Query: 228 GLS----GLTLVD------IAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVP 277
LS G +D + G HS A+T G+ Y +G +HG+LG + + P
Sbjct: 553 ALSFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLG--TSSRRVSRAP 610
Query: 278 QKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIP 337
+V L G +V V+CG +VA+ +G ++S+G+G GRLG R G P V ++
Sbjct: 611 CRVQGLEGIKMVMVACGDAFTVAVGAEGEVYSWGKGTRGRLGR-RDEDAGLPRPVQLDET 669
Query: 338 AP 339
P
Sbjct: 670 HP 671
Score = 169 (64.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 65/224 (29%), Positives = 92/224 (41%)
Query: 73 NTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQ-RCA 131
NT++VQ A G V GR W G G G +L + +PQ +
Sbjct: 337 NTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGG---------GTLLPGAVELPQPQFV 387
Query: 132 PKLI-------VRQVAAGGTHSVVLTREGHVWTWGQP----WPPGDIKQISVPVRVQ--- 177
+ + ++ VA G + LT G + T+G G++ IS P V+
Sbjct: 388 SRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEALL 447
Query: 178 GLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDI 237
G E V+ +A GA H LAL DG L+AWG + G+LG G + + P V G +
Sbjct: 448 GYEMVQ-VACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPVAPGQEAQRV 506
Query: 238 AAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVP-QKV 280
G S LT G V G +LG + VP Q+V
Sbjct: 507 VCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQV 550
>DICTYBASE|DDB_G0276527 [details] [associations]
symbol:DDB_G0276527 "putative bifunctional
serine/threonine-protein kinase/ubiquitin-protein ligase
DDB_G0276527" species:44689 "Dictyostelium discoideum" [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR000719 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
dictyBase:DDB_G0276527 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AAFI02000015 SUPFAM:SSF56204 HSSP:Q9H0M0
RefSeq:XP_643080.1 ProteinModelPortal:Q8SSY6
EnsemblProtists:DDB0219986 GeneID:8620484 KEGG:ddi:DDB_G0276527
InParanoid:Q8SSY6 OMA:IITIIVE Uniprot:Q8SSY6
Length = 1887
Score = 249 (92.7 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 83/293 (28%), Positives = 127/293 (43%)
Query: 75 KIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKL 134
KIV + G H + DQG Y +G G+ G + +++ + P L
Sbjct: 189 KIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFF-----QTKPSL 243
Query: 135 IVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQG--LEQVKLIAVGAFHN 192
V +A GG HS+ LT G V++WG D Q+ + +LI +N
Sbjct: 244 RVVSIANGGKHSLALTICGKVYSWGG----NDSCQLGLGNGSSSSYYSLPQLINFNISYN 299
Query: 193 LALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGE 252
+ NN G SQ + + +V ++ G S +TD G
Sbjct: 300 NNNNNNNNNSTNNNNNNNNDGAQQQFSLSQNSSSNN-NKIKIVKLSCGTNRSAVITDKGL 358
Query: 253 VYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGR 312
++ +GRG+HGRLG G+ + P+ V L G I+ +S GG HS+ LT G +FSFGR
Sbjct: 359 LFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGR 418
Query: 313 GDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
D G+LG G + Q +P I + + + V+ GG H++AI
Sbjct: 419 NDQGQLGIG--CFSNQ-QTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAI 468
Score = 212 (79.7 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 51/164 (31%), Positives = 90/164 (54%)
Query: 182 VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIP--VQGLSGLTLVDIAA 239
VKL + G + + + G L+ +G ++G+LG G+ Q P VQ L G ++D+++
Sbjct: 341 VKL-SCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSS 399
Query: 240 GGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGE--------DIVQV 291
GG HS LT+ G V+ +GR + G+LG G + + +P+++ +I++V
Sbjct: 400 GGGHSLVLTNKGLVFSFGRNDQGQLGIGCFS-NQQTIPKQIQWFQTSQQQQQQPINIIKV 458
Query: 292 SCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPIN 335
S GG HS+A++ + +++GR D+G LG V + + V IN
Sbjct: 459 SAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLIN 502
Score = 206 (77.6 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 51/165 (30%), Positives = 88/165 (53%)
Query: 171 SVPVRVQGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTG-----DTQPRS-- 221
S P VQ L+ +I + G H+L L G ++++G N+ GQLG G T P+
Sbjct: 381 STPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQ 440
Query: 222 --QPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 279
Q Q + ++ ++AGG+HS A++D+ + Y WGR ++G LG + + + +P
Sbjct: 441 WFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVL 500
Query: 280 VN----LLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGY 320
+N ++ + VS G H+VA++ DG ++S+G RLG+
Sbjct: 501 INSNSVVVDNVKFIDVSSGFQHNVAMSIDGSLYSWGCNAGQRLGF 545
Score = 167 (63.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 40/106 (37%), Positives = 60/106 (56%)
Query: 180 EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPV---QGLSGLTLVD 236
+++ LI+ GA H+ + + G L+ +G+ G+LG G+ + S P V Q L +V
Sbjct: 188 QKIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVS 247
Query: 237 IAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKM-VPQKVN 281
IA GG HS ALT G+VY WG + +LG G+ SS +PQ +N
Sbjct: 248 IANGGKHSLALTICGKVYSWGGNDSCQLGLGNGSSSSYYSLPQLIN 293
Score = 163 (62.4 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 38/134 (28%), Positives = 75/134 (55%)
Query: 169 QISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTG-DTQ-PRSQPIPV 226
Q S + Q + +K ++ G +H++A+ ++ +AWG ++YG LGT D Q R+ P+ +
Sbjct: 443 QTSQQQQQQPINIIK-VSAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLI 501
Query: 227 QGLS----GLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK--V 280
S + +D+++G H+ A++ DG +Y WG RLGF ++ +++ P+K +
Sbjct: 502 NSNSVVVDNVKFIDVSSGFQHNVAMSIDGSLYSWGCNAGQRLGFKSDE--NQLTPKKCFI 559
Query: 281 NLLAGEDIVQVSCG 294
N + ++ +CG
Sbjct: 560 NSKDSKPLL-FTCG 572
Score = 159 (61.0 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 55/253 (21%), Positives = 115/253 (45%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKTENIPS 66
+ +WG + QLG+GN + + + + + + N+ + ++ +
Sbjct: 264 VYSWGGNDSCQLGLGNGSSSSYYSLPQLINFNISYNNNNNNNNNNSTNNNNNNNNDGAQQ 323
Query: 67 QV----NALSNT---KIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRI 119
Q N+ SN KIV+ + G + D+G + +G ++G+ G + +
Sbjct: 324 QFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLG-----LGEQSLL 378
Query: 120 LRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI------KQISVP 173
++ + Q I+ +++GG HS+VLT +G V+++G+ G + Q ++P
Sbjct: 379 MQSTPKLVQSLQGHFII-DMSSGGGHSLVLTNKGLVFSFGRN-DQGQLGIGCFSNQQTIP 436
Query: 174 VRVQGLEQ--------VKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQP 223
++Q + + +I V G +H++A+ ++ +AWG ++YG LGT +
Sbjct: 437 KQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRN 496
Query: 224 IPVQGLSGLTLVD 236
+PV S +VD
Sbjct: 497 LPVLINSNSVVVD 509
Score = 144 (55.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 47/166 (28%), Positives = 82/166 (49%)
Query: 62 ENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDT--GRI 119
++ P V +L I+ + GG H L + ++G +++G N+ GQ G T +I
Sbjct: 380 QSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQI 439
Query: 120 LRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP--WPPG---DIK-QISVP 173
Q+ P I++ V+AGG HS+ ++ + WG+ G D++ ++P
Sbjct: 440 QWFQTSQQQQQQPINIIK-VSAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLP 498
Query: 174 VRVQG----LEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLG 213
V + ++ VK I V G HN+A+ DG+L++WG N +LG
Sbjct: 499 VLINSNSVVVDNVKFIDVSSGFQHNVAMSIDGSLYSWGCNAGQRLG 544
Score = 53 (23.7 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 18/56 (32%), Positives = 30/56 (53%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALE--P-YKVRSVVAGSRNSLAICDDGK 58
++ +G G G+LG GN E +V+ + P +V S+ G ++SLA+ GK
Sbjct: 208 NLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIANGGKHSLALTICGK 263
>ZFIN|ZDB-GENE-020509-1 [details] [associations]
symbol:nek8 "NIMA (never in mitosis gene a)-related
kinase 8" species:7955 "Danio rerio" [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0061326 "renal tubule development" evidence=IMP]
[GO:0072116 "pronephros formation" evidence=IGI] [GO:0072372
"primary cilium" evidence=IDA] [GO:0001947 "heart looping"
evidence=IGI] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-020509-1 GO:GO:0005524 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0072372 GO:GO:0001947 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 KO:K08857 EMBL:AF407580
IPI:IPI00770181 RefSeq:NP_620776.1 UniGene:Dr.12587
ProteinModelPortal:Q90XC2 GeneID:171094 KEGG:dre:171094 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 InParanoid:Q90XC2
NextBio:20797120 ArrayExpress:Q90XC2 GO:GO:0072116 GO:GO:0061326
Uniprot:Q90XC2
Length = 697
Score = 243 (90.6 bits), Expect = 6.4e-18, P = 6.4e-18
Identities = 76/221 (34%), Positives = 119/221 (53%)
Query: 155 VWTWGQPWPPGDIKQISVPVRVQGLE-QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLG 213
V+TWG G IS P+R+ L +V +++G + + + G L W E +G
Sbjct: 322 VYTWGS----G----ISTPLRLPMLNTEVIQVSLGRTQKMGVTKSGRLITW---EAPSVG 370
Query: 214 TGD-TQP----RSQP--IP--VQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRL 264
+G+ T P + QP I ++G SG+T+ ++ G +T LTD G + +G G +G L
Sbjct: 371 SGEPTLPGAVEQMQPQFISRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCL 430
Query: 265 GFGD-NDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRK 323
G G+ ND + P+ V L G ++VQVSCG +H +A+T + +FS+GRGD+GRLG +
Sbjct: 431 GHGNFNDVTQ---PKIVEALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQ 487
Query: 324 VTTGQPMEV--PINIPAPRNAGDGVDRRWIA----KLVACG 358
+ P +V P + A R GVD I +++ACG
Sbjct: 488 DSHNCPQQVSLPADFEAQRVLC-GVDCSMIMSTQHQILACG 527
Score = 238 (88.8 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 63/206 (30%), Positives = 102/206 (49%)
Query: 136 VRQVAAGGTHSVVLTREGHVWTW-------GQPWPPGDIKQISVPVRVQGLE-----QVK 183
V QV+ G T + +T+ G + TW G+P PG ++Q+ + LE +K
Sbjct: 342 VIQVSLGRTQKMGVTKSGRLITWEAPSVGSGEPTLPGAVEQMQPQFISRFLEGQSGVTIK 401
Query: 184 LIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWH 243
++ G L + G + +G+ G LG G+ +QP V+ L G LV ++ G H
Sbjct: 402 SVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQVSCGASH 461
Query: 244 STALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTR 303
A+T++ EV+ WGRG++GRLG D S PQ+V+L A + +V CG S+ ++
Sbjct: 462 VLAVTNEREVFSWGRGDNGRLGLATQD--SHNCPQQVSLPADFEAQRVLCGVDCSMIMST 519
Query: 304 DGHIFSFGRGDHGRLGYGRKVTTGQP 329
I + G +LG + T +P
Sbjct: 520 QHQILACGNNRFNKLGLDKVSGTEEP 545
Score = 202 (76.2 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 61/230 (26%), Positives = 109/230 (47%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG---EE----PERKDDTG 117
P V AL ++VQ + G H LAV ++ ++WG + G+ G ++ P++
Sbjct: 441 PKIVEALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPA 500
Query: 118 RILRRDIVIPQRCAPKLIVR-QVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRV 176
+ ++ C+ + + Q+ A G + V +P ++++ + V
Sbjct: 501 DFEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLV 560
Query: 177 QGL----EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGL 232
Q E++ I +G H++A+ E G + +G+N++GQLG + P V GL G+
Sbjct: 561 QSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQVSGLQGI 620
Query: 233 TLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNL 282
T+ A G + A+ +GEVY WG+G GRLG + D +P+ V L
Sbjct: 621 TMA--ACGDAFTLAIGAEGEVYTWGKGARGRLGRKEEDFG---IPKPVQL 665
Score = 179 (68.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 65/248 (26%), Positives = 111/248 (44%)
Query: 138 QVAAGGTHSVVLTREGHVWTWGQP------WPPGDIKQISVPVRVQGLEQVKLIAVGAFH 191
QV+ G +H + +T E V++WG+ D V + + + + G
Sbjct: 454 QVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQRVLCGVDC 513
Query: 192 NLALQEDGALWAWGNNEYGQLG----TGDTQPRS----------QPIPVQGLSGLTLVDI 237
++ + + A GNN + +LG +G +P S Q + L+ +V I
Sbjct: 514 SMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYI 573
Query: 238 AAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTH 297
G HS A+T+ G+ + +G +HG+LG +SS+ VP +V+ L G I +CG
Sbjct: 574 DIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHR-RSSR-VPYQVSGLQG--ITMAACGDAF 629
Query: 298 SVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVAC 357
++A+ +G ++++G+G GRLG RK E IP P D + + C
Sbjct: 630 TLAIGAEGEVYTWGKGARGRLG--RK-------EEDFGIPKPVQL-DESHAFTVTSVACC 679
Query: 358 GGRHTLAI 365
G LA+
Sbjct: 680 HGNTLLAV 687
Score = 156 (60.0 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 48/182 (26%), Positives = 81/182 (44%)
Query: 165 GDIKQISVPVRVQGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ 222
G+ ++ P V+ L +L+ V GA H LA+ + +++WG + G+LG +
Sbjct: 433 GNFNDVTQPKIVEALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNC 492
Query: 223 PIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGF----GDNDKSSKMVPQ 278
P V + + G S ++ ++ G +LG G + SS +
Sbjct: 493 PQQVSLPADFEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVE 552
Query: 279 KVNL--------LAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPM 330
+V+L L E IV + G HSVA+T G F+FG HG+LG + ++ P
Sbjct: 553 EVHLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPY 612
Query: 331 EV 332
+V
Sbjct: 613 QV 614
>UNIPROTKB|C9JW69 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00787306
ProteinModelPortal:C9JW69 SMR:C9JW69 STRING:C9JW69
Ensembl:ENST00000411533 ArrayExpress:C9JW69 Bgee:C9JW69
Uniprot:C9JW69
Length = 372
Score = 235 (87.8 bits), Expect = 8.1e-18, P = 8.1e-18
Identities = 79/271 (29%), Positives = 124/271 (45%)
Query: 76 IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLI 135
+VQA GG H + + G+ Y++G N+ G G DT + ++P + +
Sbjct: 86 VVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGR------DTS--VEGSEMVPGKVELQEK 137
Query: 136 VRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI-------KQISVPVRVQGLEQVKLIAVG 188
V QV+AG +H+ LT +G V+ WG + K+ VPV+VQ V +A G
Sbjct: 138 VVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASG 197
Query: 189 AFHNLALQEDGALWAWGNNEYGQLGT--------GDTQ-------PRSQPIPVQGLSG-L 232
H + L DG L+ G E GQLG G Q P+ + +G G +
Sbjct: 198 NDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHV 257
Query: 233 TLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAG--EDIVQ 290
D G + + A++ +G VYG+G + +LG + S +PQ + + V
Sbjct: 258 RFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTE--SCFIPQNLTSFKNSTKSWVG 315
Query: 291 VSCGGTHSVALTRDGHIFSFGRGDHGRLGYG 321
S G H+V + +G +S GR ++GRLG G
Sbjct: 316 FSGGQHHTVCMDSEGKAYSLGRAEYGRLGLG 346
Score = 217 (81.4 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 71/237 (29%), Positives = 114/237 (48%)
Query: 144 THSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEQVKLIAV---------GAFHNLA 194
+H T G V T GQ GD+ Q+ + V ++ L+++ G H +
Sbjct: 43 SHRSHSTEPGLVLTLGQ----GDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVC 98
Query: 195 LQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVY 254
L + G ++++G N+ G LG + S+ +P + +V ++AG H+ ALTDDG V+
Sbjct: 99 LSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVF 158
Query: 255 GWG--RGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGR 312
WG R +G +G + K S MVP +V L +V+V+ G H V LT DG +++ G
Sbjct: 159 LWGSFRDNNGVIGLLEPMKKS-MVPVQVQL--DVPVVKVASGNDHLVMLTADGDLYTLGC 215
Query: 313 GDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVEWQ 369
G+ G+LG VP + A R G++R + K V R + V +Q
Sbjct: 216 GEQGQLG-----------RVP-ELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQ 260
Score = 148 (57.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 83/336 (24%), Positives = 141/336 (41%)
Query: 7 IIAWGSGEDGQLGIGNNE-EREWVCVVKALEPYKVRSVVAGSRNSLAI----------CD 55
++ G G+ GQLG+G N ER+ +V P V AG +++ + C+
Sbjct: 54 VLTLGQGDVGQLGLGENVMERKKPALVSI--PEDVVQAEAGGMHTVCLSKSGQVYSFGCN 111
Query: 56 D----GK-TKTEN---IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGG--NEYGQ 105
D G+ T E +P +V K+VQ + G H A+ D GR + WG + G
Sbjct: 112 DEGALGRDTSVEGSEMVPGKVEL--QEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGV 169
Query: 106 CGE-EPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG--QPW 162
G EP +K ++P + + V +VA+G H V+LT +G ++T G +
Sbjct: 170 IGLLEPMKKS----------MVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQG 219
Query: 163 PPGDIKQISVPVRV-QGLEQV---KLIAV----------------GAFHNLALQEDGALW 202
G + ++ QGLE++ K + + GA+ A+ +G ++
Sbjct: 220 QLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVY 279
Query: 203 AWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIA-AGGWHSTALTDDGEVYGWGRGEH 261
+G + Y QLGT T+ P + T + +GG H T D E + G
Sbjct: 280 GFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDS-EGKAYSLGRA 338
Query: 262 GRLGFGDNDKSS-KMVPQKVNLLAGEDIVQVSCGGT 296
G + + K +P ++ L + V+CG +
Sbjct: 339 EYGRLGLGEGAEEKSIPTLISRLPA--VSSVACGAS 372
>DICTYBASE|DDB_G0282575 [details] [associations]
symbol:DDB_G0282575 "putative GTPase activating
protein (GAP)" species:44689 "Dictyostelium discoideum" [GO:0032851
"positive regulation of Rab GTPase activity" evidence=IEA]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005097 "Rab GTPase
activator activity" evidence=IEA] InterPro:IPR000195 Pfam:PF00566
PROSITE:PS50086 SMART:SM00164 dictyBase:DDB_G0282575
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5210
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923 RefSeq:XP_640136.1
ProteinModelPortal:Q54SA3 EnsemblProtists:DDB0235329 GeneID:8623673
KEGG:ddi:DDB_G0282575 InParanoid:Q54SA3 OMA:NIVFRIW Uniprot:Q54SA3
Length = 1194
Score = 179 (68.1 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 44/136 (32%), Positives = 73/136 (53%)
Query: 205 GNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRL 264
G+N+ LG G Q + Q ++ + ++ I+ G H AL+D VY WG EHG+L
Sbjct: 344 GSNDNNFLG-GVINNELQMMTDQ-MNSIKIIQISCGSNHILALSDQYHVYSWGSAEHGKL 401
Query: 265 GFGDN----DKSSKMV--PQKVNLLA--GEDIVQVSCGGTHSVALTRDGHIFSFGRGDHG 316
G G++ ++ + + P+K+ L G ++ VS G +H +ALT D I ++G+G G
Sbjct: 402 GHGEDYSFVSQNPRWINSPKKIKSLQEKGVTVISVSSGYSHCMALTLDSGILTWGKGSDG 461
Query: 317 RLGYGRKVTTGQPMEV 332
+LG G + P E+
Sbjct: 462 QLGTGFRHDIWSPFEI 477
Score = 169 (64.5 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 46/147 (31%), Positives = 81/147 (55%)
Query: 179 LEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDT------QPR--SQPIPVQG 228
+ +K+I + G+ H LAL + +++WG+ E+G+LG G+ PR + P ++
Sbjct: 366 MNSIKIIQISCGSNHILALSDQYHVYSWGSAEHGKLGHGEDYSFVSQNPRWINSPKKIKS 425
Query: 229 LS--GLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFG-DNDKSSKMVPQKVNLLAG 285
L G+T++ +++G H ALT D + WG+G G+LG G +D S ++V +
Sbjct: 426 LQEKGVTVISVSSGYSHCMALTLDSGILTWGKGSDGQLGTGFRHDIWSPFEIKRV-IDKN 484
Query: 286 EDIVQVSCGGTHSVALTRDGH-IFSFG 311
E IVQ+ CG +S +T + ++ FG
Sbjct: 485 EKIVQICCGYFNSFFITLEKRELYQFG 511
Score = 164 (62.8 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 42/131 (32%), Positives = 71/131 (54%)
Query: 155 VWTWGQPWPPGDIKQISVPVRVQGLEQVKLIAV--GAFHNLALQEDGALWAWGN-NEYGQ 211
++ WG+ GD K I P+ V L + ++ + G+ H L L + G L++WG+ N GQ
Sbjct: 12 IFYWGRGVNQGD-KHIIEPIEVPELNKKNIVQLSCGSTHTLVLSDSGDLYSWGSSNSSGQ 70
Query: 212 LGTGDTQPR-SQP--IP----VQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRL 264
LG GD++ + +P I ++ LSG +++ ++ G + LTD G +Y WG G+L
Sbjct: 71 LGHGDSKNQYGKPKNIKKFSLIKALSGDSVIQVSTGLDFTFVLTDQGSIYNWGSNIEGQL 130
Query: 265 GFGDN-DKSSK 274
G +K+ K
Sbjct: 131 ALGQPVNKNEK 141
Score = 153 (58.9 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 35/114 (30%), Positives = 60/114 (52%)
Query: 222 QPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEH-GRLGFGDNDKSSKMVPQKV 280
+PI V L+ +V ++ G H+ L+D G++Y WG G+LG GD+ K+ P+ +
Sbjct: 28 EPIEVPELNKKNIVQLSCGSTHTLVLSDSGDLYSWGSSNSSGQLGHGDS-KNQYGKPKNI 86
Query: 281 N------LLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQ 328
L+G+ ++QVS G + LT G I+++G G+L G+ V +
Sbjct: 87 KKFSLIKALSGDSVIQVSTGLDFTFVLTDQGSIYNWGSNIEGQLALGQPVNKNE 140
Score = 119 (46.9 bits), Expect = 9.8e-09, Sum P(3) = 9.8e-09
Identities = 34/130 (26%), Positives = 57/130 (43%)
Query: 33 KALEPYKVRSVVAGSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQ 92
K P KV S + N+ G + + +++ KI+Q + G H LA+ DQ
Sbjct: 332 KQTTPTKVLSFGGSNDNNFL----GGVINNELQMMTDQMNSIKIIQISCGSNHILALSDQ 387
Query: 93 GRAYAWGGNEYGQCG--EEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLT 150
Y+WG E+G+ G E+ R + I + V V++G +H + LT
Sbjct: 388 YHVYSWGSAEHGKLGHGEDYSFVSQNPRWINSPKKIKSLQEKGVTVISVSSGYSHCMALT 447
Query: 151 REGHVWTWGQ 160
+ + TWG+
Sbjct: 448 LDSGILTWGK 457
Score = 117 (46.2 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 31/98 (31%), Positives = 49/98 (50%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGG-NEYGQCGEEPERKDDTGRI--LR 121
P +V L+ IVQ + G H L + D G Y+WG N GQ G + K+ G+ ++
Sbjct: 29 PIEVPELNKKNIVQLSCGSTHTLVLSDSGDLYSWGSSNSSGQLGHG-DSKNQYGKPKNIK 87
Query: 122 RDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG 159
+ +I +I QV+ G + VLT +G ++ WG
Sbjct: 88 KFSLIKALSGDSVI--QVSTGLDFTFVLTDQGSIYNWG 123
Score = 98 (39.6 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 33/111 (29%), Positives = 55/111 (49%)
Query: 124 IVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG---------------QPWPPGDIK 168
I +P+ K IV Q++ G TH++VL+ G +++WG Q P +IK
Sbjct: 30 IEVPE-LNKKNIV-QLSCGSTHTLVLSDSGDLYSWGSSNSSGQLGHGDSKNQYGKPKNIK 87
Query: 169 QISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQP 219
+ S+ + G + V ++ G L + G+++ WG+N GQL G QP
Sbjct: 88 KFSLIKALSG-DSVIQVSTGLDFTFVLTDQGSIYNWGSNIEGQLALG--QP 135
Score = 85 (35.0 bits), Expect = 9.8e-09, Sum P(3) = 9.8e-09
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 237 IAAGGWHSTALTDDGEVYGWGRGEHGRLGFG-DN---DKSSKM-VPQKVNLLAGEDIVQV 291
I++G H+ L ++GE G+GE G+LG D+ DK S + P + L + V
Sbjct: 569 ISSGYSHTLILNENGECLSIGQGEFGQLGIPLDHSSIDKDSFVNYPTVIPALLPYFVESV 628
Query: 292 SCGGTHSVALTRDGHI 307
CG HSVA+ + ++
Sbjct: 629 QCGRWHSVAIVSNRNL 644
Score = 80 (33.2 bits), Expect = 8.8e-14, Sum P(2) = 8.8e-14
Identities = 20/60 (33%), Positives = 28/60 (46%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG-EEPERKDD 115
GK K S + ALS ++Q + G + DQG Y WG N GQ +P K++
Sbjct: 81 GKPKNIKKFSLIKALSGDSVIQVSTGLDFTFVLTDQGSIYNWGSNIEGQLALGQPVNKNE 140
Score = 76 (31.8 bits), Expect = 7.9e-08, Sum P(3) = 7.9e-08
Identities = 22/77 (28%), Positives = 34/77 (44%)
Query: 181 QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTG-DTQPRSQ------PIPVQGLSGLT 233
++K I+ G H L L E+G + G E+GQLG D + P + L
Sbjct: 565 RIKQISSGYSHTLILNENGECLSIGQGEFGQLGIPLDHSSIDKDSFVNYPTVIPALLPYF 624
Query: 234 LVDIAAGGWHSTALTDD 250
+ + G WHS A+ +
Sbjct: 625 VESVQCGRWHSVAIVSN 641
Score = 74 (31.1 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 24/82 (29%), Positives = 38/82 (46%)
Query: 288 IVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYG---RKVTTGQPMEVPINIPAPRNAGD 344
I Q+S G +H++ L +G S G+G+ G+LG + + P IPA
Sbjct: 566 IKQISSGYSHTLILNENGECLSIGQGEFGQLGIPLDHSSIDKDSFVNYPTVIPALLP--- 622
Query: 345 GVDRRWIAKLVACGGRHTLAIV 366
+ + V CG H++AIV
Sbjct: 623 -----YFVESVQCGRWHSVAIV 639
Score = 53 (23.7 bits), Expect = 9.8e-09, Sum P(3) = 9.8e-09
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 6 SIIAWGSGEDGQLGIG---NNEERE 27
SI WGS +GQL +G N E+E
Sbjct: 118 SIYNWGSNIEGQLALGQPVNKNEKE 142
>UNIPROTKB|E2QYP0 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
Pfam:PF00069 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 OMA:GCDGTFL
EMBL:AAEX03005855 RefSeq:XP_547912.3 Ensembl:ENSCAFT00000026967
GeneID:490790 KEGG:cfa:490790 NextBio:20863745 Uniprot:E2QYP0
Length = 976
Score = 237 (88.5 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 91/322 (28%), Positives = 142/322 (44%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P V L I Q + G + V D+G+ YA+G + YG G + + ++ +
Sbjct: 417 PKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNF 476
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG--QPWPPG-DIKQ-ISVPVRVQGLE 180
+ P V QV+ G H VVLTR V++WG + G D ++ P +V +
Sbjct: 477 FLNN---P---VEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPK 530
Query: 181 QVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGD------TQPRSQPIP------- 225
+ ++AV G L + G + A G NE+ +LG IP
Sbjct: 531 ALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTL 590
Query: 226 VQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAG 285
+ LS + IA G H+ A+ + G + +G + G+LG G N K + L G
Sbjct: 591 AKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVG-NYKKRLGINLLGGPLGG 649
Query: 286 EDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDG 345
+ +++VSCG ++A T D HIF++G G +GRL T +P I PR
Sbjct: 650 KQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAM---TPTERPHGSDICTSWPRPIFGS 706
Query: 346 VDRRWIAKLVACGGRHTLAIVE 367
+ + L +C G HT+ IVE
Sbjct: 707 LHH--VPDL-SCRGWHTILIVE 725
Score = 224 (83.9 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 64/223 (28%), Positives = 104/223 (46%)
Query: 146 SVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWG 205
+VV +R V+ WG G + V G + + G H + + L+ W
Sbjct: 340 AVVTSRTSEVYVWGG----GKSTPQKLDVIKSGCS-ARQVCAGNTHFAVVTVEKELYTWV 394
Query: 206 NNE-----YGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGE 260
N + +GQLG GD QP V+ L G + ++ G + +TD+G++Y +G
Sbjct: 395 NMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDY 454
Query: 261 HGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGY 320
+G +G + P ++N + QVSCG H V LTR+ ++S+G G++GRLG
Sbjct: 455 YGCMGVDKVAGPEVLEPMQLNFFLNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGL 514
Query: 321 GRKVT--TGQPMEVP--INIPAPRNAGDGVDR-RWIAKLVACG 358
+ T Q ++VP + I A + DG K++ACG
Sbjct: 515 DSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACG 557
Score = 211 (79.3 bits), Expect = 5.8e-14, P = 5.8e-14
Identities = 60/197 (30%), Positives = 97/197 (49%)
Query: 137 RQVAAGGTHSVVLTREGHVWTW----------GQPWPPGDIKQISVPVRVQGLE--QVKL 184
RQV AG TH V+T E ++TW GQ GD P V+ L+ ++
Sbjct: 372 RQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQ-LGHGDKASYRQPKHVEKLQGKAIRQ 430
Query: 185 IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQ-PRS-QPIPVQGLSGLTLVDIAAGGW 242
++ G + + ++G L+A+G++ YG +G P +P+ + + ++ G
Sbjct: 431 VSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLNNPVEQVSCGDN 490
Query: 243 HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALT 302
H LT + EVY WG GE+GRLG D+++ PQKV++ IV V CG + LT
Sbjct: 491 HVVVLTRNKEVYSWGCGEYGRLGL-DSEEDY-YTPQKVDVPKALIIVAVQCGCDGTFLLT 548
Query: 303 RDGHIFSFGRGDHGRLG 319
+ G + + G + +LG
Sbjct: 549 QSGKVLACGLNEFNKLG 565
Score = 48 (22.0 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 11 GSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK 58
G+ GQLG G+ V+ L+ +R V G ++ + D+G+
Sbjct: 399 GTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQ 446
>UNIPROTKB|Q8TD19 [details] [associations]
symbol:NEK9 "Serine/threonine-protein kinase Nek9"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:AC007055 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
KO:K08857 CleanEx:HS_NEK8 EMBL:AY048580 EMBL:AY080896 EMBL:AB082526
EMBL:BC009336 EMBL:BC093881 EMBL:BC112101 IPI:IPI00301609
RefSeq:NP_149107.4 UniGene:Hs.7200 ProteinModelPortal:Q8TD19
SMR:Q8TD19 IntAct:Q8TD19 MINT:MINT-2984282 STRING:Q8TD19
PhosphoSite:Q8TD19 DMDM:116242675 PaxDb:Q8TD19 PeptideAtlas:Q8TD19
PRIDE:Q8TD19 DNASU:91754 Ensembl:ENST00000238616 GeneID:91754
KEGG:hsa:91754 UCSC:uc001xrl.3 CTD:91754 GeneCards:GC14M075548
HGNC:HGNC:18591 HPA:HPA001405 MIM:609798 neXtProt:NX_Q8TD19
PharmGKB:PA38593 HOVERGEN:HBG039572 InParanoid:Q8TD19 OMA:GCDGTFL
OrthoDB:EOG4NZTSM PhylomeDB:Q8TD19 BindingDB:Q8TD19
ChEMBL:CHEMBL5257 GenomeRNAi:91754 NextBio:77443
ArrayExpress:Q8TD19 Bgee:Q8TD19 CleanEx:HS_NEK9
Genevestigator:Q8TD19 GermOnline:ENSG00000119638 Uniprot:Q8TD19
Length = 979
Score = 237 (88.5 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 90/322 (27%), Positives = 142/322 (44%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P V L I Q + G + V D+G+ YA+G + YG G + + ++ +
Sbjct: 417 PKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNF 476
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG--QPWPPG-DIKQ-ISVPVRVQGLE 180
+ P V QV+ G H VVLTR V++WG + G D ++ P +V +
Sbjct: 477 FLSN---P---VEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPK 530
Query: 181 QVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGD------TQPRSQPIP------- 225
+ ++AV G L + G + A G NE+ +LG +P
Sbjct: 531 ALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTL 590
Query: 226 VQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAG 285
+ LS + IA G H+ A+ + G + +G + G+LG G N K + L G
Sbjct: 591 AKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVG-NYKKRLGINLLGGPLGG 649
Query: 286 EDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDG 345
+ +++VSCG ++A T D HIF++G G +GRL T +P I PR
Sbjct: 650 KQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAM---TPTERPHGSDICTSWPRPIFGS 706
Query: 346 VDRRWIAKLVACGGRHTLAIVE 367
+ + L +C G HT+ IVE
Sbjct: 707 LHH--VPDL-SCRGWHTILIVE 725
Score = 224 (83.9 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 64/223 (28%), Positives = 104/223 (46%)
Query: 146 SVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWG 205
+VV +R V+ WG G + V G + + G H + + L+ W
Sbjct: 340 AVVTSRTSEVYVWGG----GKSTPQKLDVIKSGCS-ARQVCAGNTHFAVVTVEKELYTWV 394
Query: 206 NNE-----YGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGE 260
N + +GQLG GD QP V+ L G + ++ G + +TD+G++Y +G
Sbjct: 395 NMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDY 454
Query: 261 HGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGY 320
+G +G + P ++N + QVSCG H V LTR+ ++S+G G++GRLG
Sbjct: 455 YGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGL 514
Query: 321 GRKVT--TGQPMEVP--INIPAPRNAGDGVDR-RWIAKLVACG 358
+ T Q ++VP + I A + DG K++ACG
Sbjct: 515 DSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACG 557
Score = 211 (79.3 bits), Expect = 5.8e-14, P = 5.8e-14
Identities = 60/197 (30%), Positives = 97/197 (49%)
Query: 137 RQVAAGGTHSVVLTREGHVWTW----------GQPWPPGDIKQISVPVRVQGLE--QVKL 184
RQV AG TH V+T E ++TW GQ GD P V+ L+ ++
Sbjct: 372 RQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQ-LGHGDKASYRQPKHVEKLQGKAIRQ 430
Query: 185 IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQ-PRS-QPIPVQGLSGLTLVDIAAGGW 242
++ G + + ++G L+A+G++ YG +G P +P+ + + ++ G
Sbjct: 431 VSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDN 490
Query: 243 HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALT 302
H LT + EVY WG GE+GRLG D+++ PQKV++ IV V CG + LT
Sbjct: 491 HVVVLTRNKEVYSWGCGEYGRLGL-DSEEDY-YTPQKVDVPKALIIVAVQCGCDGTFLLT 548
Query: 303 RDGHIFSFGRGDHGRLG 319
+ G + + G + +LG
Sbjct: 549 QSGKVLACGLNEFNKLG 565
Score = 48 (22.0 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 11 GSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK 58
G+ GQLG G+ V+ L+ +R V G ++ + D+G+
Sbjct: 399 GTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQ 446
>UNIPROTKB|Q86SG6 [details] [associations]
symbol:NEK8 "Serine/threonine-protein kinase Nek8"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0072372 "primary cilium" evidence=ISS]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0005856
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
EMBL:CH471159 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 KO:K08857 Orphanet:655 EMBL:AC010761 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 EMBL:AY242354 EMBL:AY267371
EMBL:BC112240 EMBL:BC113705 EMBL:AL833909 IPI:IPI00328397
RefSeq:NP_835464.1 UniGene:Hs.448468 ProteinModelPortal:Q86SG6
SMR:Q86SG6 IntAct:Q86SG6 STRING:Q86SG6 PhosphoSite:Q86SG6
DMDM:34098463 PaxDb:Q86SG6 PRIDE:Q86SG6 DNASU:284086
Ensembl:ENST00000268766 GeneID:284086 KEGG:hsa:284086
UCSC:uc002hcp.3 GeneCards:GC17P027055 HGNC:HGNC:13387 HPA:HPA040661
HPA:HPA040679 MIM:609799 MIM:613824 neXtProt:NX_Q86SG6
PharmGKB:PA38361 InParanoid:Q86SG6 OMA:EREVFAW OrthoDB:EOG4PZJ65
GenomeRNAi:284086 NextBio:94527 ArrayExpress:Q86SG6 Bgee:Q86SG6
CleanEx:HS_NEK8 Genevestigator:Q86SG6 GermOnline:ENSG00000160602
Uniprot:Q86SG6
Length = 692
Score = 240 (89.5 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 67/198 (33%), Positives = 95/198 (47%)
Query: 136 VRQVAAGGTHSVVLTREGHVWTWGQPWP---------PGDIKQ-----ISVPVRVQGLEQ 181
V QVAAG T +TR G + W P P PG ++Q IS + Q
Sbjct: 334 VVQVAAGRTQKAGVTRSGRLILWEAP-PLGAGGGSLLPGAVEQPQPQFISRFLEGQSGVT 392
Query: 182 VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGG 241
+K +A G F L + G + +G+ G LG G SQP V+ L G +V +A G
Sbjct: 393 IKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGA 452
Query: 242 WHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVAL 301
H AL+ + E++ WGRG+ GRLG G + S PQ+V + G++ +V CG S+ L
Sbjct: 453 SHVLALSTERELFAWGRGDSGRLGLGTRESHS--CPQQVPMPPGQEAQRVVCGIDSSMIL 510
Query: 302 TRDGHIFSFGRGDHGRLG 319
T G + G +LG
Sbjct: 511 TVPGQALACGSNRFNKLG 528
Score = 227 (85.0 bits), Expect = 4.9e-16, P = 4.9e-16
Identities = 66/205 (32%), Positives = 102/205 (49%)
Query: 170 ISVPVRVQGLE-QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS--QPIP- 225
+ P+R+ L +V +A G + G L W G G G P + QP P
Sbjct: 321 LGTPLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGA-GGGSLLPGAVEQPQPQ 379
Query: 226 -----VQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV 280
++G SG+T+ +A G + + LTD G + +G G +G LG G S+ P V
Sbjct: 380 FISRFLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQ--PTIV 437
Query: 281 NLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPR 340
L G ++VQV+CG +H +AL+ + +F++GRGD GRLG G + + P +VP+ P +
Sbjct: 438 EALLGYEMVQVACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPM--PPGQ 495
Query: 341 NAGD---GVDRRWI----AKLVACG 358
A G+D I + +ACG
Sbjct: 496 EAQRVVCGIDSSMILTVPGQALACG 520
Score = 218 (81.8 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 66/242 (27%), Positives = 113/242 (46%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG----EE---PERKD-DT 116
P+ V AL ++VQ A G H LA+ + +AWG + G+ G E P++
Sbjct: 434 PTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPP 493
Query: 117 GRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRV 176
G+ +R + + Q A G++ H+ +P P +++ ++ +
Sbjct: 494 GQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEE-ALSFTL 552
Query: 177 QG---LEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSG 231
G L+Q L+++ G H+ A+ G + +G+N++GQLGT + P VQGL G
Sbjct: 553 LGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEG 612
Query: 232 LTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQV 291
+ + +A G + A+ + EVY WG+G GRLG D D P +++ + V
Sbjct: 613 IKMAMVACGDAFTVAIGAESEVYSWGKGARGRLGRRDEDAGLPR-PVQLDETHPYTVTSV 671
Query: 292 SC 293
SC
Sbjct: 672 SC 673
Score = 176 (67.0 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 58/204 (28%), Positives = 88/204 (43%)
Query: 150 TREGHVWTWGQPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEY 209
TRE H P PPG ++ + + G ++ L G A G+N +
Sbjct: 479 TRESHSCPQQVPMPPG--------------QEAQRVVCGIDSSMILTVPGQALACGSNRF 524
Query: 210 GQLGTGDTQPRSQPIPVQ-----------GLSGLT---LVDIAAGGWHSTALTDDGEVYG 255
+LG +P+P Q G + L L+ I G HS A+T G+ Y
Sbjct: 525 NKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYT 584
Query: 256 WGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDH 315
+G +HG+LG N + P KV L G + V+CG +VA+ + ++S+G+G
Sbjct: 585 FGSNQHGQLG--TNTRRGSRAPCKVQGLEGIKMAMVACGDAFTVAIGAESEVYSWGKGAR 642
Query: 316 GRLGYGRKVTTGQPMEVPINIPAP 339
GRLG R G P V ++ P
Sbjct: 643 GRLGR-RDEDAGLPRPVQLDETHP 665
Score = 148 (57.2 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 59/217 (27%), Positives = 85/217 (39%)
Query: 73 NTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE--PERKDDTG-RILRRDIVIPQR 129
NT++VQ A G V GR W G G P + + + R +
Sbjct: 331 NTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFISRFL----E 386
Query: 130 CAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----WPPGDIKQISVPVRVQ---GLEQV 182
+ ++ VA G + LT G + T+G G + IS P V+ G E V
Sbjct: 387 GQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMV 446
Query: 183 KLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGW 242
+ +A GA H LAL + L+AWG + G+LG G + S P V G + G
Sbjct: 447 Q-VACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGID 505
Query: 243 HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 279
S LT G+ G +LG + VP +
Sbjct: 506 SSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQ 542
Score = 143 (55.4 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 65/252 (25%), Positives = 109/252 (43%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAIC-----------D 55
I+ +GSG +G LG G+ + +V+AL Y++ V G+ + LA+ D
Sbjct: 412 IMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGD 471
Query: 56 DGKT-----KTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG--- 107
G+ ++ + P QV + + G + + G+A A G N + + G
Sbjct: 472 SGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDH 531
Query: 108 ----EEPERKDDTGRILRRDIV--IPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG-- 159
EEP L ++ P P L + G HS +T G +T+G
Sbjct: 532 LSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLL---SIDLGTAHSAAVTASGDCYTFGSN 588
Query: 160 QPWPPG-DIKQIS-VPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTG 215
Q G + ++ S P +VQGLE +K+ +A G +A+ + +++WG G+LG
Sbjct: 589 QHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDAFTVAIGAESEVYSWGKGARGRLGRR 648
Query: 216 DTQPRSQPIPVQ 227
D + P PVQ
Sbjct: 649 D-EDAGLPRPVQ 659
>UNIPROTKB|C9JQZ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925791
ProteinModelPortal:C9JQZ4 SMR:C9JQZ4 STRING:C9JQZ4
Ensembl:ENST00000430407 ArrayExpress:C9JQZ4 Bgee:C9JQZ4
Uniprot:C9JQZ4
Length = 283
Score = 217 (81.4 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 71/237 (29%), Positives = 114/237 (48%)
Query: 144 THSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEQVKLIAV---------GAFHNLA 194
+H T G V T GQ GD+ Q+ + V ++ L+++ G H +
Sbjct: 26 SHRSHSTEPGLVLTLGQ----GDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVC 81
Query: 195 LQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVY 254
L + G ++++G N+ G LG + S+ +P + +V ++AG H+ ALTDDG V+
Sbjct: 82 LSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVF 141
Query: 255 GWG--RGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGR 312
WG R +G +G + K S MVP +V L +V+V+ G H V LT DG +++ G
Sbjct: 142 LWGSFRDNNGVIGLLEPMKKS-MVPVQVQL--DVPVVKVASGNDHLVMLTADGDLYTLGC 198
Query: 313 GDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVEWQ 369
G+ G+LG VP + A R G++R + K V R + V +Q
Sbjct: 199 GEQGQLG-----------RVP-ELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQ 243
Score = 177 (67.4 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 62/213 (29%), Positives = 97/213 (45%)
Query: 76 IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLI 135
+VQA GG H + + G+ Y++G N+ G G DT + ++P + +
Sbjct: 69 VVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGR------DTS--VEGSEMVPGKVELQEK 120
Query: 136 VRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI-------KQISVPVRVQGLEQVKLIAVG 188
V QV+AG +H+ LT +G V+ WG + K+ VPV+VQ V +A G
Sbjct: 121 VVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASG 180
Query: 189 AFHNLALQEDGALWAWGNNEYGQLGT--------GDTQ-------PRSQPIPVQGLSG-L 232
H + L DG L+ G E GQLG G Q P+ + +G G +
Sbjct: 181 NDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHV 240
Query: 233 TLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLG 265
D G + + A++ +G VYG+G + +LG
Sbjct: 241 RFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLG 273
Score = 175 (66.7 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 51/164 (31%), Positives = 85/164 (51%)
Query: 172 VPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGN--NEYGQLGTGDTQPRSQPIPVQGL 229
VP +V+ E+V ++ G H AL +DG ++ WG+ + G +G + +S +PVQ
Sbjct: 111 VPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSM-VPVQVQ 169
Query: 230 SGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLG-----F----GDNDKSSKMVPQKV 280
+ +V +A+G H LT DG++Y G GE G+LG F G +VP+ V
Sbjct: 170 LDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCV 229
Query: 281 NLLA----GEDIVQVS-CGGTHSVALTRDGHIFSFGRGDHGRLG 319
L + G Q + CG + A++ +GH++ FG ++ +LG
Sbjct: 230 MLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLG 273
Score = 133 (51.9 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 67/256 (26%), Positives = 113/256 (44%)
Query: 7 IIAWGSGEDGQLGIGNNE-EREWVCVVKALEPYKVRSVVAGSRNSLAI----------CD 55
++ G G+ GQLG+G N ER+ +V P V AG +++ + C+
Sbjct: 37 VLTLGQGDVGQLGLGENVMERKKPALVSI--PEDVVQAEAGGMHTVCLSKSGQVYSFGCN 94
Query: 56 D----GK-TKTEN---IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGG--NEYGQ 105
D G+ T E +P +V K+VQ + G H A+ D GR + WG + G
Sbjct: 95 DEGALGRDTSVEGSEMVPGKVEL--QEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGV 152
Query: 106 CGE-EPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG--QPW 162
G EP +K ++P + + V +VA+G H V+LT +G ++T G +
Sbjct: 153 IGLLEPMKKS----------MVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQG 202
Query: 163 PPGDIKQISVPVRV-QGLEQV---KLIAV----------------GAFHNLALQEDGALW 202
G + ++ QGLE++ K + + GA+ A+ +G ++
Sbjct: 203 QLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVY 262
Query: 203 AWGNNEYGQLGTGDTQ 218
+G + Y QLGT T+
Sbjct: 263 GFGLSNYHQLGTPGTE 278
>UNIPROTKB|C9JMJ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925317
ProteinModelPortal:C9JMJ4 SMR:C9JMJ4 STRING:C9JMJ4
Ensembl:ENST00000419074 ArrayExpress:C9JMJ4 Bgee:C9JMJ4
Uniprot:C9JMJ4
Length = 272
Score = 217 (81.4 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 71/237 (29%), Positives = 114/237 (48%)
Query: 144 THSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEQVKLIAV---------GAFHNLA 194
+H T G V T GQ GD+ Q+ + V ++ L+++ G H +
Sbjct: 26 SHRSHSTEPGLVLTLGQ----GDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVC 81
Query: 195 LQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVY 254
L + G ++++G N+ G LG + S+ +P + +V ++AG H+ ALTDDG V+
Sbjct: 82 LSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVF 141
Query: 255 GWG--RGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGR 312
WG R +G +G + K S MVP +V L +V+V+ G H V LT DG +++ G
Sbjct: 142 LWGSFRDNNGVIGLLEPMKKS-MVPVQVQL--DVPVVKVASGNDHLVMLTADGDLYTLGC 198
Query: 313 GDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVEWQ 369
G+ G+LG VP + A R G++R + K V R + V +Q
Sbjct: 199 GEQGQLG-----------RVP-ELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQ 243
Score = 171 (65.3 bits), Expect = 9.5e-11, P = 9.5e-11
Identities = 61/212 (28%), Positives = 96/212 (45%)
Query: 76 IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLI 135
+VQA GG H + + G+ Y++G N+ G G DT + ++P + +
Sbjct: 69 VVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGR------DTS--VEGSEMVPGKVELQEK 120
Query: 136 VRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI-------KQISVPVRVQGLEQVKLIAVG 188
V QV+AG +H+ LT +G V+ WG + K+ VPV+VQ V +A G
Sbjct: 121 VVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASG 180
Query: 189 AFHNLALQEDGALWAWGNNEYGQLGT--------GDTQ-------PRSQPIPVQGLSG-L 232
H + L DG L+ G E GQLG G Q P+ + +G G +
Sbjct: 181 NDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHV 240
Query: 233 TLVDIAAGGWHSTALTDDGEVYGWGRGEHGRL 264
D G + + A++ +G VYG+G + +L
Sbjct: 241 RFQDAFCGAYFTFAISHEGHVYGFGLSNYHQL 272
Score = 169 (64.5 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 50/163 (30%), Positives = 84/163 (51%)
Query: 172 VPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGN--NEYGQLGTGDTQPRSQPIPVQGL 229
VP +V+ E+V ++ G H AL +DG ++ WG+ + G +G + +S +PVQ
Sbjct: 111 VPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSM-VPVQVQ 169
Query: 230 SGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLG-----F----GDNDKSSKMVPQKV 280
+ +V +A+G H LT DG++Y G GE G+LG F G +VP+ V
Sbjct: 170 LDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCV 229
Query: 281 NLLA----GEDIVQVS-CGGTHSVALTRDGHIFSFGRGDHGRL 318
L + G Q + CG + A++ +GH++ FG ++ +L
Sbjct: 230 MLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQL 272
Score = 122 (48.0 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 50/175 (28%), Positives = 80/175 (45%)
Query: 7 IIAWGSGEDGQLGIGNNE-EREWVCVVKALEPYKVRSVVAGSRNSLAI----------CD 55
++ G G+ GQLG+G N ER+ +V P V AG +++ + C+
Sbjct: 37 VLTLGQGDVGQLGLGENVMERKKPALVSI--PEDVVQAEAGGMHTVCLSKSGQVYSFGCN 94
Query: 56 D----GK-TKTEN---IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGG--NEYGQ 105
D G+ T E +P +V K+VQ + G H A+ D GR + WG + G
Sbjct: 95 DEGALGRDTSVEGSEMVPGKVEL--QEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGV 152
Query: 106 CGE-EPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG 159
G EP +K ++P + + V +VA+G H V+LT +G ++T G
Sbjct: 153 IGLLEPMKKS----------MVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLG 197
>RGD|1307187 [details] [associations]
symbol:Nek9 "NIMA-related kinase 9" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=ISO] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 RGD:1307187 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 OMA:GCDGTFL OrthoDB:EOG4NZTSM IPI:IPI00870835
Ensembl:ENSRNOT00000009300 UCSC:RGD:1307187 ArrayExpress:D4A4B2
Uniprot:D4A4B2
Length = 975
Score = 240 (89.5 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 91/322 (28%), Positives = 142/322 (44%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P V L I Q + G + V D+G+ YA+G + YG G + + ++ +
Sbjct: 415 PKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNF 474
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG--QPWPPG-DIKQ-ISVPVRVQGLE 180
+ P V QV+ G H VVLTR V++WG + G D ++ P RV +
Sbjct: 475 FLSN---P---VEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPK 528
Query: 181 QVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGD------TQPRSQPIP------- 225
+ ++AV G L + G + A G NE+ +LG +P
Sbjct: 529 ALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTL 588
Query: 226 VQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAG 285
+ LS + IA G H+ A+ + G + +G + G+LG G N K + L G
Sbjct: 589 AKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVG-NYKKRLGINLLGGPLGG 647
Query: 286 EDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDG 345
+ +++VSCG ++A T D HIF++G G +GRL T +P I PR
Sbjct: 648 KQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAM---TPTERPHGSDICTSWPRPIFGS 704
Query: 346 VDRRWIAKLVACGGRHTLAIVE 367
+ + L +C G HT+ IVE
Sbjct: 705 LHH--VPDL-SCRGWHTILIVE 723
Score = 225 (84.3 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 64/223 (28%), Positives = 104/223 (46%)
Query: 146 SVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWG 205
+VV +R V+ WG G + V G + + G H + + L+ W
Sbjct: 338 AVVTSRTSEVYVWGG----GKSTPQKLDVIKSGCS-ARQVCAGNTHFAVVTVEKELYTWV 392
Query: 206 NNE-----YGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGE 260
N + +GQLG GD QP V+ L G + ++ G + +TD+G++Y +G
Sbjct: 393 NMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDY 452
Query: 261 HGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGY 320
+G +G + P ++N + QVSCG H V LTR+ ++S+G G++GRLG
Sbjct: 453 YGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGL 512
Query: 321 GRKVT--TGQPMEVP--INIPAPRNAGDGVDR-RWIAKLVACG 358
+ T Q ++VP + I A + DG K++ACG
Sbjct: 513 DSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACG 555
Score = 206 (77.6 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 59/197 (29%), Positives = 96/197 (48%)
Query: 137 RQVAAGGTHSVVLTREGHVWTW----------GQPWPPGDIKQISVPVRVQGLE--QVKL 184
RQV AG TH V+T E ++TW GQ GD P V+ L+ +
Sbjct: 370 RQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQ-LGHGDKASYRQPKHVEKLQGKAIHQ 428
Query: 185 IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQ-PRS-QPIPVQGLSGLTLVDIAAGGW 242
++ G + + ++G L+A+G++ YG +G P +P+ + + ++ G
Sbjct: 429 VSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDN 488
Query: 243 HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALT 302
H LT + EVY WG GE+GRLG D+++ PQ+V++ IV V CG + LT
Sbjct: 489 HVVVLTRNKEVYSWGCGEYGRLGL-DSEEDY-YTPQRVDVPKALIIVAVQCGCDGTFLLT 546
Query: 303 RDGHIFSFGRGDHGRLG 319
+ G + + G + +LG
Sbjct: 547 QSGKVLACGLNEFNKLG 563
Score = 186 (70.5 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 74/291 (25%), Positives = 116/291 (39%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P Q+N + + Q + G H + + Y+WG EYG+ G + E D
Sbjct: 469 PMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEE----------DY 518
Query: 125 VIPQRC-APK-LIVRQVAAGGTHSVVLTREGHVWTWG---------QPWPPGDIKQIS-- 171
PQR PK LI+ V G + +LT+ G V G G I +
Sbjct: 519 YTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYH 578
Query: 172 -VPVRVQ-------GLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQP 223
VP +++ IA G H A+ E G L +G N+ GQLG G+ + R
Sbjct: 579 EVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGI 638
Query: 224 IPVQG-LSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDK--SSKMVPQKV 280
+ G L G ++ ++ G + A TDD ++ WG G +GRL ++ S +
Sbjct: 639 NLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWP 698
Query: 281 NLLAGE--DIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQP 329
+ G + +SC G H++ + R + L G V + P
Sbjct: 699 RPIFGSLHHVPDLSCRGWHTILIVEKVLNSKTIRSNSSGLSIGTVVQSSSP 749
Score = 43 (20.2 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 12/48 (25%), Positives = 22/48 (45%)
Query: 11 GSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK 58
G+ GQLG G+ V+ L+ + V G ++ + D+G+
Sbjct: 397 GTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQ 444
>MGI|MGI:2387995 [details] [associations]
symbol:Nek9 "NIMA (never in mitosis gene a)-related
expressed kinase 9" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 MGI:MGI:2387995
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0019901 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466590
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 HOVERGEN:HBG039572
OMA:GCDGTFL OrthoDB:EOG4NZTSM EMBL:AJ489828 EMBL:BC024926
EMBL:BC117971 EMBL:BC117972 IPI:IPI00169806 RefSeq:NP_660120.2
UniGene:Mm.29071 ProteinModelPortal:Q8K1R7 SMR:Q8K1R7
DIP:DIP-56880N IntAct:Q8K1R7 STRING:Q8K1R7 PhosphoSite:Q8K1R7
PaxDb:Q8K1R7 PRIDE:Q8K1R7 Ensembl:ENSMUST00000040992 GeneID:217718
KEGG:mmu:217718 InParanoid:Q148U2 NextBio:375996 Bgee:Q8K1R7
Genevestigator:Q8K1R7 GermOnline:ENSMUSG00000034290 Uniprot:Q8K1R7
Length = 984
Score = 240 (89.5 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 91/322 (28%), Positives = 142/322 (44%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P V L I Q + G + V D+G+ YA+G + YG G + + ++ +
Sbjct: 417 PKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNF 476
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG--QPWPPG-DIKQ-ISVPVRVQGLE 180
+ P V QV+ G H VVLTR V++WG + G D ++ P RV +
Sbjct: 477 FLSN---P---VEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPK 530
Query: 181 QVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGD------TQPRSQPIP------- 225
+ ++AV G L + G + A G NE+ +LG +P
Sbjct: 531 ALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTL 590
Query: 226 VQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAG 285
+ LS + IA G H+ A+ + G + +G + G+LG G N K + L G
Sbjct: 591 AKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVG-NYKKRLGINLLGGPLGG 649
Query: 286 EDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDG 345
+ +++VSCG ++A T D HIF++G G +GRL T +P I PR
Sbjct: 650 KQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAM---TPTERPHGSDICTSWPRPIFGS 706
Query: 346 VDRRWIAKLVACGGRHTLAIVE 367
+ + L +C G HT+ IVE
Sbjct: 707 LHH--VPDL-SCRGWHTILIVE 725
Score = 225 (84.3 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 64/223 (28%), Positives = 104/223 (46%)
Query: 146 SVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWG 205
+VV +R V+ WG G + V G + + G H + + L+ W
Sbjct: 340 AVVTSRTSEVYVWGG----GKSTPQKLDVIKSGCS-ARQVCAGNTHFAVVTVEKELYTWV 394
Query: 206 NNE-----YGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGE 260
N + +GQLG GD QP V+ L G + ++ G + +TD+G++Y +G
Sbjct: 395 NMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDY 454
Query: 261 HGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGY 320
+G +G + P ++N + QVSCG H V LTR+ ++S+G G++GRLG
Sbjct: 455 YGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGL 514
Query: 321 GRKVT--TGQPMEVP--INIPAPRNAGDGVDR-RWIAKLVACG 358
+ T Q ++VP + I A + DG K++ACG
Sbjct: 515 DSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACG 557
Score = 206 (77.6 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 59/197 (29%), Positives = 96/197 (48%)
Query: 137 RQVAAGGTHSVVLTREGHVWTW----------GQPWPPGDIKQISVPVRVQGLE--QVKL 184
RQV AG TH V+T E ++TW GQ GD P V+ L+ +
Sbjct: 372 RQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQ-LGHGDKASYRQPKHVEKLQGKAIHQ 430
Query: 185 IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQ-PRS-QPIPVQGLSGLTLVDIAAGGW 242
++ G + + ++G L+A+G++ YG +G P +P+ + + ++ G
Sbjct: 431 VSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDN 490
Query: 243 HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALT 302
H LT + EVY WG GE+GRLG D+++ PQ+V++ IV V CG + LT
Sbjct: 491 HVVVLTRNKEVYSWGCGEYGRLGL-DSEEDY-YTPQRVDVPKALIIVAVQCGCDGTFLLT 548
Query: 303 RDGHIFSFGRGDHGRLG 319
+ G + + G + +LG
Sbjct: 549 QSGKVLACGLNEFNKLG 565
Score = 186 (70.5 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 74/291 (25%), Positives = 116/291 (39%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P Q+N + + Q + G H + + Y+WG EYG+ G + E D
Sbjct: 471 PMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEE----------DY 520
Query: 125 VIPQRC-APK-LIVRQVAAGGTHSVVLTREGHVWTWG---------QPWPPGDIKQIS-- 171
PQR PK LI+ V G + +LT+ G V G G I +
Sbjct: 521 YTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYH 580
Query: 172 -VPVRVQ-------GLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQP 223
VP +++ IA G H A+ E G L +G N+ GQLG G+ + R
Sbjct: 581 EVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGI 640
Query: 224 IPVQG-LSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDK--SSKMVPQKV 280
+ G L G ++ ++ G + A TDD ++ WG G +GRL ++ S +
Sbjct: 641 NLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWP 700
Query: 281 NLLAGE--DIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQP 329
+ G + +SC G H++ + R + L G V + P
Sbjct: 701 RPIFGSLHHVPDLSCRGWHTILIVEKVLNSKTIRSNSSGLSIGTVVQSSSP 751
Score = 43 (20.2 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 12/48 (25%), Positives = 22/48 (45%)
Query: 11 GSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK 58
G+ GQLG G+ V+ L+ + V G ++ + D+G+
Sbjct: 399 GTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQ 446
>UNIPROTKB|E2QZC2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
Ensembl:ENSCAFT00000029828 Uniprot:E2QZC2
Length = 701
Score = 239 (89.2 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 66/201 (32%), Positives = 96/201 (47%)
Query: 136 VRQVAAGGTHSVVLTREGHVWTWGQPWP---------PGDIKQ-----ISVPVRVQGLEQ 181
V QVAAG T +TR G + W P P PG ++Q +S + Q
Sbjct: 343 VVQVAAGRTQKAGVTRSGRLILWEAP-PLGAGGGALLPGAVEQQQPQFVSRFLEGQSGVT 401
Query: 182 VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGG 241
+K +A G L + G + +G+ G LG G SQP V+ L G +V +A G
Sbjct: 402 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGA 461
Query: 242 WHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVAL 301
H AL+ + E++ WGRG+ GRLG G + S PQ+V++ G++ +V CG S+ L
Sbjct: 462 SHVLALSTERELFAWGRGDGGRLGLGTRESHS--CPQQVSMPPGQEAQRVVCGIDSSMIL 519
Query: 302 TRDGHIFSFGRGDHGRLGYGR 322
T G + G +LG R
Sbjct: 520 TVPGRALACGSNRFNKLGLDR 540
Score = 218 (81.8 bits), Expect = 5.5e-15, P = 5.5e-15
Identities = 68/206 (33%), Positives = 102/206 (49%)
Query: 170 ISVPVRVQGLE-QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQP----RSQPI 224
+S P+R+ L +V +A G + G L W G G G P + QP
Sbjct: 330 LSAPLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGA-GGGALLPGAVEQQQPQ 388
Query: 225 PV----QGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGD-NDKSSKMVPQK 279
V +G SG+T+ +A G + LTD G + +G G +G LG G ND S P
Sbjct: 389 FVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQ---PTI 445
Query: 280 VNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
V L G ++VQV+CG +H +AL+ + +F++GRGD GRLG G + + P +V ++P
Sbjct: 446 VEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQQV--SMPPG 503
Query: 340 RNAGD---GVDRRWI----AKLVACG 358
+ A G+D I + +ACG
Sbjct: 504 QEAQRVVCGIDSSMILTVPGRALACG 529
Score = 212 (79.7 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 67/242 (27%), Positives = 114/242 (47%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG----EE---PERKD-DT 116
P+ V AL ++VQ A G H LA+ + +AWG + G+ G E P++
Sbjct: 443 PTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQQVSMPP 502
Query: 117 GRILRRDIV-IPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQ-IS-VP 173
G+ +R + I + R +A G L + + +P P +++ +S P
Sbjct: 503 GQEAQRVVCGIDSSMILTVPGRALACGSNRFNKLGLD-RLSLGEEPAPNQQVEEALSFTP 561
Query: 174 VRVQGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSG 231
+ ++ L++V G H+ A+ G + +G+N++GQLGT + P VQGL
Sbjct: 562 LGSAPFDREPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQGLQN 621
Query: 232 LTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQV 291
+ + +A G + A+ +GEVY WG+G GRLG D D P +++ + + V
Sbjct: 622 IKIAMVACGDAFTVAVGAEGEVYSWGKGARGRLGRRDEDAGLPR-PVQLDEIHPYTVTSV 680
Query: 292 SC 293
SC
Sbjct: 681 SC 682
Score = 165 (63.1 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 54/182 (29%), Positives = 85/182 (46%)
Query: 168 KQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQ 227
+Q+S+P G E +++ G ++ L G A G+N + +LG +P P Q
Sbjct: 496 QQVSMP---PGQEAQRVVC-GIDSSMILTVPGRALACGSNRFNKLGLDRLSLGEEPAPNQ 551
Query: 228 ----GLS----GLT------LVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSS 273
LS G L+ + G HS A+T G+ Y +G +HG+LG N +
Sbjct: 552 QVEEALSFTPLGSAPFDREPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLG--TNARRV 609
Query: 274 KMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVP 333
P +V L I V+CG +VA+ +G ++S+G+G GRLG R G P V
Sbjct: 610 SRAPCQVQGLQNIKIAMVACGDAFTVAVGAEGEVYSWGKGARGRLGR-RDEDAGLPRPVQ 668
Query: 334 IN 335
++
Sbjct: 669 LD 670
Score = 143 (55.4 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 57/203 (28%), Positives = 80/203 (39%)
Query: 73 NTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE--PER-KDDTGRILRRDIVIPQR 129
NT++VQ A G V GR W G G P + + + R +
Sbjct: 340 NTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAVEQQQPQFVSRFL----E 395
Query: 130 CAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----WPPGDIKQISVPVRVQ---GLEQV 182
+ ++ VA G + LT G + T+G G + IS P V+ G E V
Sbjct: 396 GQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMV 455
Query: 183 KLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGW 242
+ +A GA H LAL + L+AWG + G+LG G + S P V G + G
Sbjct: 456 Q-VACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQQVSMPPGQEAQRVVCGID 514
Query: 243 HSTALTDDGEVYGWGRGEHGRLG 265
S LT G G +LG
Sbjct: 515 SSMILTVPGRALACGSNRFNKLG 537
>UNIPROTKB|C9JRH2 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 OrthoDB:EOG4320Z9
IPI:IPI00927389 ProteinModelPortal:C9JRH2 SMR:C9JRH2 STRING:C9JRH2
Ensembl:ENST00000427469 ArrayExpress:C9JRH2 Bgee:C9JRH2
Uniprot:C9JRH2
Length = 230
Score = 216 (81.1 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 60/187 (32%), Positives = 97/187 (51%)
Query: 144 THSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEQVKLIAV---------GAFHNLA 194
+H T G V T GQ GD+ Q+ + V ++ L+++ G H +
Sbjct: 26 SHRSHSTEPGLVLTLGQ----GDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVC 81
Query: 195 LQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVY 254
L + G ++++G N+ G LG + S+ +P + +V ++AG H+ ALTDDG V+
Sbjct: 82 LSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVF 141
Query: 255 GWG--RGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGR 312
WG R +G +G + K S MVP +V L +V+V+ G H V LT DG +++ G
Sbjct: 142 LWGSFRDNNGVIGLLEPMKKS-MVPVQVQL--DVPVVKVASGNDHLVMLTADGDLYTLGC 198
Query: 313 GDHGRLG 319
G+ G+LG
Sbjct: 199 GEQGQLG 205
Score = 155 (59.6 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 47/145 (32%), Positives = 70/145 (48%)
Query: 76 IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLI 135
+VQA GG H + + G+ Y++G N+ G G DT + ++P + +
Sbjct: 69 VVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGR------DTS--VEGSEMVPGKVELQEK 120
Query: 136 VRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI-------KQISVPVRVQGLEQVKLIAVG 188
V QV+AG +H+ LT +G V+ WG + K+ VPV+VQ V +A G
Sbjct: 121 VVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASG 180
Query: 189 AFHNLALQEDGALWAWGNNEYGQLG 213
H + L DG L+ G E GQLG
Sbjct: 181 NDHLVMLTADGDLYTLGCGEQGQLG 205
Score = 122 (48.0 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 50/175 (28%), Positives = 80/175 (45%)
Query: 7 IIAWGSGEDGQLGIGNNE-EREWVCVVKALEPYKVRSVVAGSRNSLAI----------CD 55
++ G G+ GQLG+G N ER+ +V P V AG +++ + C+
Sbjct: 37 VLTLGQGDVGQLGLGENVMERKKPALVSI--PEDVVQAEAGGMHTVCLSKSGQVYSFGCN 94
Query: 56 D----GK-TKTEN---IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGG--NEYGQ 105
D G+ T E +P +V K+VQ + G H A+ D GR + WG + G
Sbjct: 95 DEGALGRDTSVEGSEMVPGKVEL--QEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGV 152
Query: 106 CGE-EPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG 159
G EP +K ++P + + V +VA+G H V+LT +G ++T G
Sbjct: 153 IGLLEPMKKS----------MVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLG 197
>UNIPROTKB|F1NXI5 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00682810 Ensembl:ENSGALT00000010072 OMA:PIELDIT
Uniprot:F1NXI5
Length = 382
Score = 230 (86.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 85/313 (27%), Positives = 143/313 (45%)
Query: 76 IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPK-- 133
I A GG H + G + G N+ GQ G + T D++ C
Sbjct: 32 IKSIAGGGGHSAVITGAGELFVCGHNKAGQLG-----LNHT-----EDVLCFTLCTALSG 81
Query: 134 LIVRQVAAGGTHSVVLTREGHVWTWGQ-PWPPGDIKQIS----VPVRVQGLEQVKL-IAV 187
V++VA G +++L R G V + G + + QIS +P +++ L++ + IA
Sbjct: 82 FCVQEVACGWDFTIILGRAGLVLSCGSNAFGQLGVPQISGPCLIPQKIKSLKEKAVGIAA 141
Query: 188 GAFHNLALQEDGALWAWGN---NEYGQLGTGDTQP----RSQPIPVQGLSGLTLVDIAAG 240
G H LA E G ++ WG + ++ G T P +P ++G G+ L ++
Sbjct: 142 GLRHALAATESGLVFQWGTGMASRAKRVHQGKTLPVFWAAKEPCEIKGNPGVLLCQVSLS 201
Query: 241 GWHSTALT-DDGEVYGWGRGEHGRLGFGDNDKSSKMV-PQKVN--LLAGEDIVQVSCGGT 296
+ ++ T +G +Y WG +HG+L K +V P+K++ + E I V G T
Sbjct: 202 AYLTSLSTAGEGHLYVWGSNKHGQLV----SKEVFLVEPKKIDTQFFSHEKIGAVWSGWT 257
Query: 297 HSVALTRDGHIFSFGRGDHGRLGYGRKV-TTGQPMEVPINIPA-PRNAGDGVDRRWIAKL 354
H VA T G +F++GR D+G+LG V + +++ +P P+ + I
Sbjct: 258 HLVAQTETGKVFTWGRADYGQLGRHAAVYVADRVIKLDSFLPCCPQPEAEKNGNHTILLF 317
Query: 355 -VACGGRHTLAIV 366
+ACG H LA+V
Sbjct: 318 QIACGSEHNLAVV 330
Score = 155 (59.6 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 54/200 (27%), Positives = 96/200 (48%)
Query: 185 IAVGAF-HNLALQEDGALWAWGNNEYGQLGTGDT---QPRSQPIPVQGLSGLTLVDIAAG 240
+++ A+ +L+ +G L+ WG+N++GQL + + +P+ I Q S + + +G
Sbjct: 198 VSLSAYLTSLSTAGEGHLYVWGSNKHGQLVSKEVFLVEPKK--IDTQFFSHEKIGAVWSG 255
Query: 241 GWHSTALTDDGEVYGWGRGEHGRLG------FGDN----DKSSKMVPQKVNLLAGEDIV- 289
H A T+ G+V+ WGR ++G+LG D D PQ G +
Sbjct: 256 WTHLVAQTETGKVFTWGRADYGQLGRHAAVYVADRVIKLDSFLPCCPQPEAEKNGNHTIL 315
Query: 290 --QVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVD 347
Q++CG H++A+ D + S+G +HG G G E +++P P A G
Sbjct: 316 LFQIACGSEHNLAVVGDCCL-SWGWNEHGMCGDGT--------EANVHVPKPVKAL-GYA 365
Query: 348 RRWIAKLVACGGRHTLAIVE 367
++ L+ CG H+LA+ +
Sbjct: 366 KQI---LIGCGAGHSLALCQ 382
Score = 145 (56.1 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 45/154 (29%), Positives = 71/154 (46%)
Query: 180 EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAA 239
+ +K IA G H+ + G L+ G+N+ GQLG T+ LSG + ++A
Sbjct: 30 QDIKSIAGGGGHSAVITGAGELFVCGHNKAGQLGLNHTEDVLCFTLCTALSGFCVQEVAC 89
Query: 240 GGWHSTALTDD-GEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHS 298
G W T + G V G G+LG ++PQK+ L E V ++ G H+
Sbjct: 90 G-WDFTIILGRAGLVLSCGSNAFGQLGV-PQISGPCLIPQKIKSLK-EKAVGIAAGLRHA 146
Query: 299 VALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
+A T G +F +G G R ++V G+ + V
Sbjct: 147 LAATESGLVFQWGTGMASR---AKRVHQGKTLPV 177
Score = 141 (54.7 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 49/165 (29%), Positives = 74/165 (44%)
Query: 205 GNNEYGQLGTGDTQPRSQPIPVQGLSGLT--LVDIAAGGWHSTALTDDGEVYGWGRGEHG 262
G N YGQLG G + P ++ +S + IA GG HS +T GE++ G + G
Sbjct: 1 GANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCGHNKAG 60
Query: 263 RLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGR 322
+LG N + L+G + +V+CG ++ L R G + S G G+LG +
Sbjct: 61 QLGL--NHTEDVLCFTLCTALSGFCVQEVACGWDFTIILGRAGLVLSCGSNAFGQLGVPQ 118
Query: 323 KVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
+G P +P I + + G+ A G RH LA E
Sbjct: 119 --ISG-PCLIPQKIKSLKEKAVGI---------AAGLRHALAATE 151
Score = 125 (49.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 41/137 (29%), Positives = 60/137 (43%)
Query: 180 EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLG------TGDTQPRSQ------PIPVQ 227
E++ + G H +A E G ++ WG +YGQLG D + P P
Sbjct: 247 EKIGAVWSGWTHLVAQTETGKVFTWGRADYGQLGRHAAVYVADRVIKLDSFLPCCPQPEA 306
Query: 228 GLSG---LTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLA 284
+G + L IA G H+ A+ D WG EHG G D +++ VP+ V L
Sbjct: 307 EKNGNHTILLFQIACGSEHNLAVVGDC-CLSWGWNEHGMCG--DGTEANVHVPKPVKALG 363
Query: 285 GEDIVQVSCGGTHSVAL 301
+ + CG HS+AL
Sbjct: 364 YAKQILIGCGAGHSLAL 380
Score = 125 (49.1 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 41/149 (27%), Positives = 70/149 (46%)
Query: 65 PSQVNA--LSNTKIVQAAIGGW-HCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILR 121
P +++ S+ KI A GW H +A + G+ + WG +YGQ G R+++
Sbjct: 236 PKKIDTQFFSHEKI-GAVWSGWTHLVAQTETGKVFTWGRADYGQLGRHAAVYV-ADRVIK 293
Query: 122 RDIVIPQRCAPK----------LIVRQVAAGGTHSVVLTREGHV-WTWGQPWPPGDIKQI 170
D +P C P+ +++ Q+A G H++ + + + W W + GD +
Sbjct: 294 LDSFLP--CCPQPEAEKNGNHTILLFQIACGSEHNLAVVGDCCLSWGWNEHGMCGDGTEA 351
Query: 171 SV----PVRVQGLEQVKLIAVGAFHNLAL 195
+V PV+ G + LI GA H+LAL
Sbjct: 352 NVHVPKPVKALGYAKQILIGCGAGHSLAL 380
Score = 116 (45.9 bits), Expect = 0.00055, P = 0.00055
Identities = 60/233 (25%), Positives = 97/233 (41%)
Query: 11 GSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAG-------SRNSLAI-CDD---GKT 59
G + GQLG+ + E+ + AL + V+ V G R L + C G+
Sbjct: 55 GHNKAGQLGLNHTEDVLCFTLCTALSGFCVQEVACGWDFTIILGRAGLVLSCGSNAFGQL 114
Query: 60 KTENI------PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERK 113
I P ++ +L K V A G H LA + G + WG G ++
Sbjct: 115 GVPQISGPCLIPQKIKSLKE-KAVGIAAGLRHALAATESGLVFQWGT---GMASRA--KR 168
Query: 114 DDTGRILRRDIVIPQRCA----PKLIVRQVAAGGTHSVVLTR-EGHVWTWGQPWPPGDI- 167
G+ L + C P +++ QV+ + + T EGH++ WG G +
Sbjct: 169 VHQGKTLPVFWAAKEPCEIKGNPGVLLCQVSLSAYLTSLSTAGEGHLYVWGSN-KHGQLV 227
Query: 168 -KQISV--PVRV--QGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLG 213
K++ + P ++ Q K+ AV G H +A E G ++ WG +YGQLG
Sbjct: 228 SKEVFLVEPKKIDTQFFSHEKIGAVWSGWTHLVAQTETGKVFTWGRADYGQLG 280
Score = 56 (24.8 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 39/162 (24%), Positives = 68/162 (41%)
Query: 11 GSGEDGQLGIGNNEEREWVCVVK--ALEPYKVRSVVAGSRNSLAICDDGKTKT--ENIPS 66
G+ GQLG+G+ E+ ++K + + ++S+ G +S I G+ N
Sbjct: 1 GANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCGHNKAG 60
Query: 67 QVNALSNTKIVQA-----AIGGWHCLAVDDQGRAYAWGGNEYG---QCGEEPERKDDTGR 118
Q+ L++T+ V A+ G+ C+ G + G CG + +
Sbjct: 61 QLG-LNHTEDVLCFTLCTALSGF-CVQEVACGWDFTIILGRAGLVLSCGSNAFGQLGVPQ 118
Query: 119 ILRRDIVIPQRCAP-KLIVRQVAAGGTHSVVLTREGHVWTWG 159
I +IPQ+ K +AAG H++ T G V+ WG
Sbjct: 119 I-SGPCLIPQKIKSLKEKAVGIAAGLRHALAATESGLVFQWG 159
Score = 48 (22.0 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 15/54 (27%), Positives = 30/54 (55%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVV-KALEPYKVRSV--VAGSRNSLAICDDG 57
+++ GS GQLG+ + C++ + ++ K ++V AG R++LA + G
Sbjct: 103 VLSCGSNAFGQLGV---PQISGPCLIPQKIKSLKEKAVGIAAGLRHALAATESG 153
Score = 37 (18.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 7 IIAWGSGEDGQL 18
+ WGS + GQL
Sbjct: 215 LYVWGSNKHGQL 226
>UNIPROTKB|E1B827 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072372 "primary cilium" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 OMA:EREVFAW EMBL:DAAA02048605
EMBL:DAAA02048606 IPI:IPI00700790 Ensembl:ENSBTAT00000020643
Uniprot:E1B827
Length = 698
Score = 236 (88.1 bits), Expect = 4.4e-17, P = 4.4e-17
Identities = 76/249 (30%), Positives = 113/249 (45%)
Query: 136 VRQVAAGGTHSVVLTREGHVWTWGQPWP---------PGDIKQ-----ISVPVRVQGLEQ 181
V QVAAG T +TR G + W P P PG ++Q +S + Q
Sbjct: 340 VVQVAAGRTQKAGVTRSGRLILWEAP-PLGAGGGALLPGAVEQQQPQFVSRFLEGQSGVT 398
Query: 182 VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGG 241
+K +A G L + G + +G+ G LG G SQP V+ L G +V +A G
Sbjct: 399 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGGLNDISQPTIVEALLGYEMVQVACGA 458
Query: 242 WHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVAL 301
H AL+ + E++ WGRG+ GRLG G + S PQ+V + G++ +V CG SV L
Sbjct: 459 SHVLALSTERELFAWGRGDGGRLGLGTRESHS--CPQQVPMPPGQEAQRVICGIDSSVIL 516
Query: 302 TRDGHIFSFGRGDHGRLGY-----GRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVA 356
T G + G +LG G + Q +E +N P + +D+ + V
Sbjct: 517 TVPGQALACGSNRFNKLGLDHLSLGEEPALHQQVEEALNF-TPLGSAP-LDQEPLLS-VD 573
Query: 357 CGGRHTLAI 365
G H+ A+
Sbjct: 574 LGTAHSAAV 582
Score = 223 (83.6 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 70/243 (28%), Positives = 114/243 (46%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG----EE---PERKD-DT 116
P+ V AL ++VQ A G H LA+ + +AWG + G+ G E P++
Sbjct: 440 PTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQQVPMPP 499
Query: 117 GRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQIS--VPV 174
G+ +R I + Q A G++ H+ +P +++ P+
Sbjct: 500 GQEAQRVICGIDSSVILTVPGQALACGSNRFNKLGLDHLSLGEEPALHQQVEEALNFTPL 559
Query: 175 RVQGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGL 232
L+Q L++V G H+ A+ G + +G+N++GQLGT + P VQGL G+
Sbjct: 560 GSAPLDQEPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQGLQGI 619
Query: 233 TLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGED--IVQ 290
+ +A G + A+ +GEVY WG+G GRLG D D + +P+ V L + +
Sbjct: 620 KIAMVACGDAFTVAIGAEGEVYSWGKGARGRLGRRDEDAA---LPRPVQLDETQPYTVTS 676
Query: 291 VSC 293
VSC
Sbjct: 677 VSC 679
Score = 158 (60.7 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 59/201 (29%), Positives = 89/201 (44%)
Query: 150 TREGHVWTWGQPWPPGDIKQ-----------ISVPVRVQGLEQVKLIAVGAFHNLALQED 198
TRE H P PPG Q ++VP + + +G H L+L E+
Sbjct: 485 TRESHSCPQQVPMPPGQEAQRVICGIDSSVILTVPGQALACGSNRFNKLGLDH-LSLGEE 543
Query: 199 GALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGR 258
AL ++ + T S P+ + L VD+ G HS A+T G+ Y +G
Sbjct: 544 PAL-----HQQVEEALNFTPLGSAPLDQEPLLS---VDL--GTAHSAAVTASGDCYTFGS 593
Query: 259 GEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRL 318
+HG+LG N + P +V L G I V+CG +VA+ +G ++S+G+G GRL
Sbjct: 594 NQHGQLG--TNARRVSRAPCQVQGLQGIKIAMVACGDAFTVAIGAEGEVYSWGKGARGRL 651
Query: 319 GYGRKVTTGQPMEVPINIPAP 339
G R P V ++ P
Sbjct: 652 GR-RDEDAALPRPVQLDETQP 671
Score = 152 (58.6 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 65/252 (25%), Positives = 110/252 (43%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDD---------- 56
I+ +GSG +G LG G + +V+AL Y++ V G+ + LA+ +
Sbjct: 418 IMTFGSGSNGCLGHGGLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGD 477
Query: 57 ------GKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG--- 107
G ++ + P QV + + G + + G+A A G N + + G
Sbjct: 478 GGRLGLGTRESHSCPQQVPMPPGQEAQRVICGIDSSVILTVPGQALACGSNRFNKLGLDH 537
Query: 108 ----EEPERKDDTGRILRRDIVIPQRCAP--KLIVRQVAAGGTHSVVLTREGHVWTWG-- 159
EEP L P AP + + V G HS +T G +T+G
Sbjct: 538 LSLGEEPALHQQVEEALN---FTPLGSAPLDQEPLLSVDLGTAHSAAVTASGDCYTFGSN 594
Query: 160 QPWPPG-DIKQIS-VPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTG 215
Q G + +++S P +VQGL+ +K+ +A G +A+ +G +++WG G+LG
Sbjct: 595 QHGQLGTNARRVSRAPCQVQGLQGIKIAMVACGDAFTVAIGAEGEVYSWGKGARGRLGRR 654
Query: 216 DTQPRSQPIPVQ 227
D + + P PVQ
Sbjct: 655 D-EDAALPRPVQ 665
Score = 143 (55.4 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 57/203 (28%), Positives = 81/203 (39%)
Query: 73 NTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE--PER-KDDTGRILRRDIVIPQR 129
NT++VQ A G V GR W G G P + + + R +
Sbjct: 337 NTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAVEQQQPQFVSRFL----E 392
Query: 130 CAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----WPPGDIKQISVPVRVQ---GLEQV 182
+ ++ VA G + LT G + T+G G + IS P V+ G E V
Sbjct: 393 GQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGGLNDISQPTIVEALLGYEMV 452
Query: 183 KLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGW 242
+ +A GA H LAL + L+AWG + G+LG G + S P V G + G
Sbjct: 453 Q-VACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQQVPMPPGQEAQRVICGID 511
Query: 243 HSTALTDDGEVYGWGRGEHGRLG 265
S LT G+ G +LG
Sbjct: 512 SSVILTVPGQALACGSNRFNKLG 534
>UNIPROTKB|F1RNC5 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104137
EMBL:FP016171 Ensembl:ENSSSCT00000019338 OMA:EPASHQQ Uniprot:F1RNC5
Length = 700
Score = 230 (86.0 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 66/198 (33%), Positives = 93/198 (46%)
Query: 136 VRQVAAGGTHSVVLTREGHVWTWGQPWP---------PGDIKQ-----ISVPVRVQGLEQ 181
V QVAAG T +TR G + W P P PG I+Q +S + Q
Sbjct: 342 VVQVAAGRTQKAGVTRSGRLILWEAP-PLGAGGGALLPGAIEQPQPQFVSRFLEGQSGVT 400
Query: 182 VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGG 241
+K +A G L + G + +G+ G LG G SQP V+ L G +V +A G
Sbjct: 401 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGA 460
Query: 242 WHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVAL 301
H AL+ + E++ WGRG+ GRLG G + S PQ V + G++ +V CG S+ L
Sbjct: 461 SHVLALSTERELFAWGRGDGGRLGLGTRE--SHCCPQLVPMPPGQEAQRVVCGIDSSMIL 518
Query: 302 TRDGHIFSFGRGDHGRLG 319
T G + G +LG
Sbjct: 519 TVPGQALACGSNRFNKLG 536
Score = 225 (84.3 bits), Expect = 8.7e-16, P = 8.7e-16
Identities = 77/239 (32%), Positives = 112/239 (46%)
Query: 137 RQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLE-QVKLIAVGAFHNLAL 195
R V G + V+TWG G + S P+R+ L +V +A G +
Sbjct: 304 RGVPRGPARPAIPPPLSSVYTWG-----GGL---SAPLRLPMLNTEVVQVAAGRTQKAGV 355
Query: 196 QEDGALWAWGNNEYGQLGTGDTQPRS--QPIP------VQGLSGLTLVDIAAGGWHSTAL 247
G L W G G G P + QP P ++G SG+T+ +A G + L
Sbjct: 356 TRSGRLILWEAPPLGA-GGGALLPGAIEQPQPQFVSRFLEGQSGVTIKHVACGDLFTACL 414
Query: 248 TDDGEVYGWGRGEHGRLGFGD-NDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGH 306
TD G + +G G +G LG G ND S P V L G ++VQV+CG +H +AL+ +
Sbjct: 415 TDRGIIMTFGSGSNGCLGHGSLNDISQ---PTIVEALLGYEMVQVACGASHVLALSTERE 471
Query: 307 IFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGD---GVDRRWI----AKLVACG 358
+F++GRGD GRLG G + + P VP+ P + A G+D I + +ACG
Sbjct: 472 LFAWGRGDGGRLGLGTRESHCCPQLVPM--PPGQEAQRVVCGIDSSMILTVPGQALACG 528
Score = 212 (79.7 bits), Expect = 6.2e-17, Sum P(2) = 6.2e-17
Identities = 67/241 (27%), Positives = 110/241 (45%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG----EE---PERKD-DT 116
P+ V AL ++VQ A G H LA+ + +AWG + G+ G E P+
Sbjct: 442 PTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMPP 501
Query: 117 GRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISV--PV 174
G+ +R + + Q A G++ + +P P +++ P+
Sbjct: 502 GQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPL 561
Query: 175 RVQGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGL 232
L+Q L++V G H+L L G + +G+N++GQLGT + P VQGL G+
Sbjct: 562 GSAPLDQEPLLSVDLGPAHSLLLTASGDCYTFGSNQHGQLGTNARRVSRAPCRVQGLQGI 621
Query: 233 TLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVS 292
+ +A G + A+ +GEV+ WG+G GRLG D D P +++ + VS
Sbjct: 622 KISTVACGDAFTVAIGAEGEVFSWGKGARGRLGRKDEDAGLPR-PVQLDETHPYTVTSVS 680
Query: 293 C 293
C
Sbjct: 681 C 681
Score = 167 (63.8 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 58/204 (28%), Positives = 87/204 (42%)
Query: 150 TREGHVWTWGQPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEY 209
TRE H P PPG ++ + + G ++ L G A G+N +
Sbjct: 487 TRESHCCPQLVPMPPG--------------QEAQRVVCGIDSSMILTVPGQALACGSNRF 532
Query: 210 GQLGTGDTQPRSQPIPVQ-----------GLSGLT---LVDIAAGGWHSTALTDDGEVYG 255
+LG +P P Q G + L L+ + G HS LT G+ Y
Sbjct: 533 NKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLDQEPLLSVDLGPAHSLLLTASGDCYT 592
Query: 256 WGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDH 315
+G +HG+LG N + P +V L G I V+CG +VA+ +G +FS+G+G
Sbjct: 593 FGSNQHGQLG--TNARRVSRAPCRVQGLQGIKISTVACGDAFTVAIGAEGEVFSWGKGAR 650
Query: 316 GRLGYGRKVTTGQPMEVPINIPAP 339
GRLG + G P V ++ P
Sbjct: 651 GRLGR-KDEDAGLPRPVQLDETHP 673
Score = 138 (53.6 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 59/208 (28%), Positives = 82/208 (39%)
Query: 73 NTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQ-RCA 131
NT++VQ A G V GR W G G G +L I PQ +
Sbjct: 339 NTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGG---------GALLPGAIEQPQPQFV 389
Query: 132 PKLI-------VRQVAAGGTHSVVLTREGHVWTWGQP----WPPGDIKQISVPVRVQ--- 177
+ + ++ VA G + LT G + T+G G + IS P V+
Sbjct: 390 SRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALL 449
Query: 178 GLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDI 237
G E V+ +A GA H LAL + L+AWG + G+LG G + P V G +
Sbjct: 450 GYEMVQ-VACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMPPGQEAQRV 508
Query: 238 AAGGWHSTALTDDGEVYGWGRGEHGRLG 265
G S LT G+ G +LG
Sbjct: 509 VCGIDSSMILTVPGQALACGSNRFNKLG 536
Score = 67 (28.6 bits), Expect = 6.2e-17, Sum P(2) = 6.2e-17
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAI 53
I+ +GSG +G LG G+ + +V+AL Y++ V G+ + LA+
Sbjct: 420 IMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHVLAL 466
>UNIPROTKB|E1BRZ2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS50012 GeneTree:ENSGT00700000104137 OMA:EREVFAW
EMBL:AADN02025864 IPI:IPI00574044 ProteinModelPortal:E1BRZ2
Ensembl:ENSGALT00000006340 Uniprot:E1BRZ2
Length = 689
Score = 221 (82.9 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 67/237 (28%), Positives = 112/237 (47%)
Query: 137 RQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLE-QVKLIAVGAFHNLAL 195
R V G + + ++TWG G I+ P+R+ L +V ++ G +
Sbjct: 302 RGVRGGSARTGIPPPLSSIYTWGS----G----ITTPLRLPMLNTEVVQVSAGRTQKAGV 353
Query: 196 QEDGALWAWGNNEYGQLG-------TGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALT 248
+ G L W G G T QP+ ++G SG+T+ ++ G + LT
Sbjct: 354 TKSGRLIMWEAPPMGTAGGPSLPGATEQLQPQFVSRFLEGQSGVTIKHVSCGDLFTACLT 413
Query: 249 DDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIF 308
D G + +G G +G LG G+ S+ P+ V L G ++VQV+CG +H +A++ + +F
Sbjct: 414 DRGIIMTFGSGSNGCLGHGNFTDVSQ--PKIVEALLGYEMVQVACGASHVLAVSNEREVF 471
Query: 309 SFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGD---GVDRRWIA----KLVACG 358
++GRGD+GRLG G P +V + P A G+D + +++ACG
Sbjct: 472 AWGRGDNGRLGLGTLECHNSPQQVAV--PPEHEAQRVICGIDSSMVLTVNNQILACG 526
Score = 217 (81.4 bits), Expect = 7.0e-15, P = 7.0e-15
Identities = 62/207 (29%), Positives = 99/207 (47%)
Query: 136 VRQVAAGGTHSVVLTREGHVWTW--------GQPWPPGDIKQISVPVRVQGLE-----QV 182
V QV+AG T +T+ G + W G P PG +Q+ + LE +
Sbjct: 340 VVQVSAGRTQKAGVTKSGRLIMWEAPPMGTAGGPSLPGATEQLQPQFVSRFLEGQSGVTI 399
Query: 183 KLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGW 242
K ++ G L + G + +G+ G LG G+ SQP V+ L G +V +A G
Sbjct: 400 KHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNFTDVSQPKIVEALLGYEMVQVACGAS 459
Query: 243 HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALT 302
H A++++ EV+ WGRG++GRLG G + + PQ+V + + +V CG S+ LT
Sbjct: 460 HVLAVSNEREVFAWGRGDNGRLGLGTLECHNS--PQQVAVPPEHEAQRVICGIDSSMVLT 517
Query: 303 RDGHIFSFGRGDHGRLGYGRKVTTGQP 329
+ I + G +LG R + +P
Sbjct: 518 VNNQILACGSNRCNKLGLDRISSAEEP 544
Score = 207 (77.9 bits), Expect = 7.1e-17, Sum P(2) = 7.1e-17
Identities = 66/249 (26%), Positives = 109/249 (43%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYG-------QCGEEPERKDDTG 117
P V AL ++VQ A G H LAV ++ +AWG + G +C P++
Sbjct: 440 PKIVEALLGYEMVQVACGASHVLAVSNEREVFAWGRGDNGRLGLGTLECHNSPQQVAVPP 499
Query: 118 RILRRDIVIPQRCAPKLIVR-QVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRV 176
+ ++ + L V Q+ A G++ + + +P P +++ +V
Sbjct: 500 EHEAQRVICGIDSSMVLTVNNQILACGSNRCNKLGLDRISSAEEPSPEDQVEEATVFTCA 559
Query: 177 QG--LEQVKLIA--VGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGL 232
Q L Q ++ +G H+ A+ G + +G+N++GQLGT + P V GL +
Sbjct: 560 QSAPLNQEPVVCADIGTAHSAAVTASGQCYTFGSNQHGQLGTNSCRNSRVPHLVVGLRAM 619
Query: 233 TLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVS 292
+ +A G + A+ DGEV WG+G GRLG D + +P+ V L V S
Sbjct: 620 KVTVVACGDAFTVAIGADGEVCTWGKGARGRLGRKDEETG---MPRPVQLEETHPYVVTS 676
Query: 293 CGGTHSVAL 301
H L
Sbjct: 677 VACCHGNTL 685
Score = 153 (58.9 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 49/186 (26%), Positives = 80/186 (43%)
Query: 168 KQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQ 227
+Q++VP + + + G ++ L + + A G+N +LG +P P
Sbjct: 493 QQVAVPPE----HEAQRVICGIDSSMVLTVNNQILACGSNRCNKLGLDRISSAEEPSPED 548
Query: 228 GLSGLTLVDIAA--------------GGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSS 273
+ T+ A G HS A+T G+ Y +G +HG+LG N +
Sbjct: 549 QVEEATVFTCAQSAPLNQEPVVCADIGTAHSAAVTASGQCYTFGSNQHGQLG--TNSCRN 606
Query: 274 KMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVP 333
VP V L + V+CG +VA+ DG + ++G+G GRLG + TG P V
Sbjct: 607 SRVPHLVVGLRAMKVTVVACGDAFTVAIGADGEVCTWGKGARGRLGR-KDEETGMPRPVQ 665
Query: 334 INIPAP 339
+ P
Sbjct: 666 LEETHP 671
Score = 133 (51.9 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 50/213 (23%), Positives = 85/213 (39%)
Query: 73 NTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAP 132
NT++VQ + G V GR W G G P T ++ + +
Sbjct: 337 NTEVVQVSAGRTQKAGVTKSGRLIMWEAPPMGTAGG-PSLPGATEQLQPQFVSRFLEGQS 395
Query: 133 KLIVRQVAAGGTHSVVLTREGHVWTWGQP----WPPGDIKQISVPVRVQ---GLEQVKLI 185
+ ++ V+ G + LT G + T+G G+ +S P V+ G E V+ +
Sbjct: 396 GVTIKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNFTDVSQPKIVEALLGYEMVQ-V 454
Query: 186 AVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHST 245
A GA H LA+ + ++AWG + G+LG G + + P V + G S
Sbjct: 455 ACGASHVLAVSNEREVFAWGRGDNGRLGLGTLECHNSPQQVAVPPEHEAQRVICGIDSSM 514
Query: 246 ALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQ 278
LT + ++ G +LG + + P+
Sbjct: 515 VLTVNNQILACGSNRCNKLGLDRISSAEEPSPE 547
Score = 72 (30.4 bits), Expect = 7.1e-17, Sum P(2) = 7.1e-17
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDD 56
I+ +GSG +G LG GN + +V+AL Y++ V G+ + LA+ ++
Sbjct: 418 IMTFGSGSNGCLGHGNFTDVSQPKIVEALLGYEMVQVACGASHVLAVSNE 467
>UNIPROTKB|E2R5W9 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 OMA:ERPGAWF GeneTree:ENSGT00700000104312
EMBL:AAEX03002330 EMBL:AAEX03002329 Ensembl:ENSCAFT00000035362
Uniprot:E2R5W9
Length = 313
Score = 215 (80.7 bits), Expect = 8.3e-17, Sum P(2) = 8.3e-17
Identities = 62/208 (29%), Positives = 106/208 (50%)
Query: 94 RAYAWGGNEYGQCGEEPERKDDTGR-ILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTRE 152
R +W G +G CG GR +L + + Q VR+V+A +++ ++TRE
Sbjct: 5 RRGSWFG--FGFCGFGQAPGSGRGRQVLSPEPL--QTPGSGADVRRVSASWSYTALVTRE 60
Query: 153 GHVWTWGQPWP--PG-DIKQISV-PVRVQGLE---QVKLIAVGAFHNLALQEDGALWAWG 205
+P P PG Q ++ P + L + + + +GA H L L E G +++WG
Sbjct: 61 RPPPALLRPGPRVPGAKAPQPALRPPAPRALAPELRARRLELGAEHALLLDEAGQVFSWG 120
Query: 206 NNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLG 265
+GQLG G + +P ++ L GL + ++AAGGWHS +++ G++Y WG E G+L
Sbjct: 121 QGRHGQLGHGSLEAEPEPRLLEALQGLPVAEVAAGGWHSVCVSETGDIYIWGWNESGQLA 180
Query: 266 FGDND--KSSKMVPQKVNLLAGEDIVQV 291
+ +K +P++ + L ED +V
Sbjct: 181 LPSRSLAEDTKTIPREASGL-NEDGFEV 207
Score = 203 (76.5 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 68/231 (29%), Positives = 107/231 (46%)
Query: 81 IGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVA 140
+G H L +D+ G+ ++WG +GQ G + R+L +P V +VA
Sbjct: 102 LGAEHALLLDEAGQVFSWGQGRHGQLGHGSLEAEPEPRLLEALQGLP--------VAEVA 153
Query: 141 AGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGA 200
AGG HSV ++ G ++ WG W + Q+++P R E K I A L EDG
Sbjct: 154 AGGWHSVCVSETGDIYIWG--W--NESGQLALPSRSLA-EDTKTIPREAS---GLNEDG- 204
Query: 201 LWAWGNNEYGQLGTGDTQPRSQPIP-VQGLS-GLTLVDIAAGGWHSTALTDDGEVYGWGR 258
+ G+ G QP P + L G +V + G H+ +T GE+Y WG
Sbjct: 205 -FEVRRTAKGEDGAPAPFIAIQPFPALLDLPLGADVVKASCGSRHTAVVTGTGELYTWGW 263
Query: 259 GEHGRLGFGDNDKSSKMVPQKVNLLAGEDI-VQ-VSCG--GTHSVALTRDG 305
G++G+LG D + P +V + + V+ VSCG T+ A+ ++G
Sbjct: 264 GKYGQLGHKDTTSLDR--PCRVEYFVDKQLQVRAVSCGPWNTYVYAVEKEG 312
Score = 198 (74.8 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 59/214 (27%), Positives = 105/214 (49%)
Query: 127 PQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGLEQV 182
P+ AP+L R++ G H+++L G V++WGQ G ++ P ++ L+ +
Sbjct: 88 PRALAPELRARRLELGAEHALLLDEAGQVFSWGQGRHGQLGHGSLEAEPEPRLLEALQGL 147
Query: 183 KL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLT-LVDIAA 239
+ +A G +H++ + E G ++ WG NE GQL +P + L+ T + A
Sbjct: 148 PVAEVAAGGWHSVCVSETGDIYIWGWNESGQLA----------LPSRSLAEDTKTIPREA 197
Query: 240 GGWHSTALTDDG-EVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHS 298
G L +DG EV +GE G + + P ++L G D+V+ SCG H+
Sbjct: 198 SG-----LNEDGFEVRRTAKGEDGAPA---PFIAIQPFPALLDLPLGADVVKASCGSRHT 249
Query: 299 VALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
+T G ++++G G +G+LG+ + +P V
Sbjct: 250 AVVTGTGELYTWGWGKYGQLGHKDTTSLDRPCRV 283
Score = 154 (59.3 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 55/194 (28%), Positives = 84/194 (43%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERK--D 114
G + E P + AL + + A GGWH + V + G Y WG NE GQ P R +
Sbjct: 130 GSLEAEPEPRLLEALQGLPVAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL-PSRSLAE 188
Query: 115 DTGRILRRDIVIPQRCAPKLIVRQVAAG--GTHSVVLTREGHVWTWGQPWPPGDIKQISV 172
DT I R + + VR+ A G G + + QP+P + +
Sbjct: 189 DTKTIPREASGLNE---DGFEVRRTAKGEDGAPAPFIAI--------QPFPA----LLDL 233
Query: 173 PVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGL--S 230
P+ G + VK + G+ H + G L+ WG +YGQLG DT +P V+
Sbjct: 234 PL---GADVVKA-SCGSRHTAVVTGTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDK 289
Query: 231 GLTLVDIAAGGWHS 244
L + ++ G W++
Sbjct: 290 QLQVRAVSCGPWNT 303
Score = 38 (18.4 bits), Expect = 8.3e-17, Sum P(2) = 8.3e-17
Identities = 18/65 (27%), Positives = 24/65 (36%)
Query: 301 LTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGR 360
L DG F R G G QP +++P G D + K +CG R
Sbjct: 200 LNEDG--FEVRRTAKGEDGAPAPFIAIQPFPALLDLPL------GAD---VVK-ASCGSR 247
Query: 361 HTLAI 365
HT +
Sbjct: 248 HTAVV 252
>UNIPROTKB|F1NZF2 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0021785
"branchiomotor neuron axon guidance" evidence=IEA] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0032880
"regulation of protein localization" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0051493
"regulation of cytoskeleton organization" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS50012
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
GeneTree:ENSGT00390000011403 PANTHER:PTHR12846 OMA:LLSILHW
EMBL:AC149787 EMBL:AADN02042674 IPI:IPI00599046
Ensembl:ENSGALT00000027346 Uniprot:F1NZF2
Length = 4580
Score = 166 (63.5 bits), Expect = 9.5e-17, Sum P(2) = 9.5e-17
Identities = 51/141 (36%), Positives = 72/141 (51%)
Query: 232 LTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQV 291
L V ++ G HS L ++G+VY +G G+HG+LG GD +S+ P V L G QV
Sbjct: 840 LRAVQVSCGFHHSVILMENGDVYTFGYGQHGQLGHGD--VNSRGCPTLVQALPGPS-TQV 896
Query: 292 SCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPI-NI-PAPR-NAGDGVDR 348
+ G H+ L DG +F+FG G+LG R + +++P N PAP N G R
Sbjct: 897 TAGSNHTAILLMDGQVFTFGSFSKGQLG--RPI-----LDMPYWNAKPAPMPNIGSKYGR 949
Query: 349 R--WIAKLVACGGRHTLAIVE 367
+ WI A G + L I E
Sbjct: 950 KATWIG---ASGDQTFLRIDE 967
Score = 138 (53.6 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 29/81 (35%), Positives = 46/81 (56%)
Query: 185 IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHS 244
++ G H++ L E+G ++ +G ++GQLG GD R P VQ L G + + AG H+
Sbjct: 845 VSCGFHHSVILMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPS-TQVTAGSNHT 903
Query: 245 TALTDDGEVYGWGRGEHGRLG 265
L DG+V+ +G G+LG
Sbjct: 904 AILLMDGQVFTFGSFSKGQLG 924
Score = 135 (52.6 bits), Expect = 9.5e-17, Sum P(2) = 9.5e-17
Identities = 44/179 (24%), Positives = 81/179 (45%)
Query: 46 GSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIG--GWHCLAVDDQGRAYAWGGNEY 103
G SL I G + + + + + KI+Q ++G G H L V D G + G
Sbjct: 454 GKYQSLGIKQGGPSAGKWVELPIT--KSPKIIQFSVGHDGSHALLVADDGSIFFTGSASK 511
Query: 104 GQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWP 163
G+ GE + + + + I+ + K+++ G+ SV+ +++G ++ +G+
Sbjct: 512 GEDGESTKSRRQSKPYKPKKII---KMEGKIVISTACNNGSSSVI-SKDGELYMFGKDAI 567
Query: 164 PGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ 222
D + ++ + QV A+G H L ++G +W +G N GQ G DT SQ
Sbjct: 568 YSDSTSLVTDLKGHFVTQV---AMGKAHTCVLMKNGEVWTFGVNNKGQCGR-DTGSMSQ 622
Score = 123 (48.4 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 34/97 (35%), Positives = 45/97 (46%)
Query: 243 HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALT 302
H L + + G GE G D K + P V VQVSCG HSV L
Sbjct: 800 HPAQLKHKRDKHKDGSGERGEK---DASKITTYPPGAVRFDCELRAVQVSCGFHHSVILM 856
Query: 303 RDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
+G +++FG G HG+LG+G + G P V +P P
Sbjct: 857 ENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA-LPGP 892
Score = 72 (30.4 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 32/130 (24%), Positives = 51/130 (39%)
Query: 1 MASTTSIIAWGS---GEDGQLGIGNNEEREWVC--VVKALEPYKVRSVVAGSRNSLAICD 55
+A SI GS GEDG+ + + + ++K +E V S + +S I
Sbjct: 497 VADDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIK-MEGKIVISTACNNGSSSVISK 555
Query: 56 DGKTKT-------ENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 108
DG+ + S V L + Q A+G H + G + +G N GQCG
Sbjct: 556 DGELYMFGKDAIYSDSTSLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGR 615
Query: 109 EPERKDDTGR 118
+ G+
Sbjct: 616 DTGSMSQGGK 625
>SGD|S000003065 [details] [associations]
symbol:SRM1 "Nucleotide exchange factor for Gsp1p"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0007067 "mitosis" evidence=IEA] [GO:0019236
"response to pheromone" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0000054
"ribosomal subunit export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=IMP] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
SGD:S000003065 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016021
GO:GO:0051301 GO:GO:0007067 EMBL:BK006941 GO:GO:0000790
GO:GO:0004871 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0019236 GO:GO:0000054
GeneTree:ENSGT00700000104160 GO:GO:0006407 OMA:PFEAIWA
HOGENOM:HOG000170207 OrthoDB:EOG466ZVF EMBL:M27013 EMBL:Z72619
PIR:A32320 RefSeq:NP_011418.1 PDB:3OF7 PDBsum:3OF7
ProteinModelPortal:P21827 SMR:P21827 DIP:DIP-2315N IntAct:P21827
MINT:MINT-561451 STRING:P21827 PaxDb:P21827 PeptideAtlas:P21827
EnsemblFungi:YGL097W GeneID:852782 KEGG:sce:YGL097W CYGD:YGL097w
EvolutionaryTrace:P21827 NextBio:972265 Genevestigator:P21827
GermOnline:YGL097W Uniprot:P21827
Length = 482
Score = 230 (86.0 bits), Expect = 9.9e-17, P = 9.9e-17
Identities = 75/267 (28%), Positives = 124/267 (46%)
Query: 58 KTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTG 117
K K + P +V S IVQ A G H L +D++G +AWG + Q G + +
Sbjct: 205 KIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMER---- 260
Query: 118 RILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG-----QPWPPGDIKQ--- 169
R + P+ + V+ +A+G H LT++ + +WG Q D++
Sbjct: 261 --FRLKTLDPRPFGLRH-VKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGAL 317
Query: 170 ISVPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTG-DTQP------- 219
++ P R+ + V + IA G H+L L +DG L++ G + ++G D P
Sbjct: 318 VTKPKRLALPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDV 377
Query: 220 ----RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKM 275
R+ P+P + + +AAG HS A+ +G Y WG GE +G G + ++
Sbjct: 378 HGKARAVPLPTKLNNVPKFKSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPFEDDTE- 436
Query: 276 VPQKVNLLAGED--IVQVSCGGTHSVA 300
VP ++ A +D I+ V CGG SV+
Sbjct: 437 VPTRIKNTATQDHNIILVGCGGQFSVS 463
Score = 200 (75.5 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 99/389 (25%), Positives = 166/389 (42%)
Query: 7 IIAWGSGEDGQLGIG---NNEE--REWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKT 61
I WG+G +LG+G N+E R + + K+ S G ++LA+ ++ +
Sbjct: 48 IFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNVWS 107
Query: 62 ENIPSQVNALS-NTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRIL 120
+ V AL +T + + + DD +E G E + T +
Sbjct: 108 WGC-NDVGALGRDTSNAKEQLKD---MDADDSS------DDEDGDLNE----LESTPAKI 153
Query: 121 RRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ--------PWPPGDIKQISV 172
R+ P K++ Q+AA S L G V+ WG + IK
Sbjct: 154 PRESFPPLAEGHKVV--QLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKT 211
Query: 173 PVRVQGLEQVKLI--AVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQP-RSQPIPVQGL 229
P +V + ++ A G H L L E+G ++AWGN + QLG + R + + +
Sbjct: 212 PWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPF 271
Query: 230 SGLTLVD-IAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDI 288
GL V IA+G H ALT D ++ WG + G+ G ++ + +V + L +++
Sbjct: 272 -GLRHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNV 330
Query: 289 V--QVSCGGTHSVALTRDGHIFSFGRGDHGRLG--------YGRKVTTGQPMEVPINIPA 338
V ++ G HS+ L++DG ++S GR D +G Y K G+ VP+ P
Sbjct: 331 VIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPL--PT 388
Query: 339 PRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
N V + K VA G H++A+ +
Sbjct: 389 KLN---NVPK---FKSVAAGSHHSVAVAQ 411
Score = 176 (67.0 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 65/205 (31%), Positives = 93/205 (45%)
Query: 178 GLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGD--------TQPRSQPIPVQGL 229
GL VK IA G H AL +D L +WG N++GQ G + T+P+ +P
Sbjct: 272 GLRHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALP---- 327
Query: 230 SGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFG-DN-------DKSSKM--VPQK 279
+ + IAAG HS L+ DG++Y GR + +G DN D K VP
Sbjct: 328 DNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLP 387
Query: 280 VNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
L V+ G HSVA+ ++G +S+G G+ +G G EVP I
Sbjct: 388 TKLNNVPKFKSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLG---PFEDDTEVPTRI--- 441
Query: 340 RNAGDGVDRRWIAKLVACGGRHTLA 364
+N D I LV CGG+ +++
Sbjct: 442 KNTATQ-DHNII--LVGCGGQFSVS 463
Score = 96 (38.9 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 23/90 (25%), Positives = 43/90 (47%)
Query: 23 NEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKTENIPSQVNAL---SNTKIVQA 79
N + ++ + +++P + GS L + K K P ++N KI+
Sbjct: 31 NAQEDYKHMYLSVQPLDIFCWGTGSMCELGLGPLAKNKEVKRP-RLNPFLPRDEAKIISF 89
Query: 80 AIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 109
A+GG H LA+D++ ++WG N+ G G +
Sbjct: 90 AVGGMHTLALDEESNVWSWGCNDVGALGRD 119
>UNIPROTKB|E1BH40 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051493 "regulation of cytoskeleton organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 KO:K10693
PANTHER:PTHR12846 CTD:23077 GO:GO:0021785 OMA:LLSILHW
EMBL:DAAA02033607 EMBL:DAAA02033608 EMBL:DAAA02033609
EMBL:DAAA02033610 IPI:IPI00705654 RefSeq:NP_001179746.1
UniGene:Bt.105085 Ensembl:ENSBTAT00000025100 GeneID:534496
KEGG:bta:534496 NextBio:20876421 Uniprot:E1BH40
Length = 4640
Score = 175 (66.7 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 53/141 (37%), Positives = 73/141 (51%)
Query: 232 LTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQV 291
L V ++ G HS L ++G+VY +G G+HG+LG GD +S+ P V L G QV
Sbjct: 902 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGD--VNSRGCPTLVQALPGPS-TQV 958
Query: 292 SCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPI-NI-PAPR-NAGDGVDR 348
+ G H+ AL DG +F+FG G+LG R + ++VP N PAP N G R
Sbjct: 959 TAGSNHTAALLMDGQVFTFGSFSKGQLG--RPI-----LDVPYWNAKPAPMPNIGSKYGR 1011
Query: 349 R--WIAKLVACGGRHTLAIVE 367
+ WI A G + L I E
Sbjct: 1012 KATWIG---ASGDQTFLRIDE 1029
Score = 145 (56.1 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 35/104 (33%), Positives = 57/104 (54%)
Query: 162 WPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS 221
+PPG ++ +R V+ ++ G H++ L E+G ++ +G ++GQLG GD R
Sbjct: 891 YPPGSVR-FDCELRA-----VQ-VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRG 943
Query: 222 QPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLG 265
P VQ L G + + AG H+ AL DG+V+ +G G+LG
Sbjct: 944 CPTLVQALPGPS-TQVTAGSNHTAALLMDGQVFTFGSFSKGQLG 986
Score = 125 (49.1 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 43/179 (24%), Positives = 80/179 (44%)
Query: 46 GSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIG--GWHCLAVDDQGRAYAWGGNEY 103
G SL I G + + + + + KIV ++G G H L V + G + G
Sbjct: 516 GKYQSLGIKQGGPSAGKWVELPIT--KSPKIVHFSVGHDGSHALLVAEDGSIFFTGSASK 573
Query: 104 GQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWP 163
G+ GE + + + + I+ + K++V G+ SV+ +++G ++ +G+
Sbjct: 574 GEDGESTKSRRQSKPYKPKKII---KMEGKIVVYTACNNGSSSVI-SKDGELYMFGKDAI 629
Query: 164 PGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ 222
D + ++ + QV A+G H L ++G +W +G N GQ G DT +Q
Sbjct: 630 YSDSSSLVTDLKGHFVTQV---AMGKAHTCVLMKNGEVWTFGVNNKGQCGR-DTGAMNQ 684
Score = 125 (49.1 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 34/97 (35%), Positives = 45/97 (46%)
Query: 243 HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALT 302
H L + + G GE G D K + P V VQVSCG HSV L
Sbjct: 862 HPAQLKHKRDKHKDGSGERGEK---DASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLM 918
Query: 303 RDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
+G +++FG G HG+LG+G + G P V +P P
Sbjct: 919 ENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA-LPGP 954
Score = 67 (28.6 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 32/130 (24%), Positives = 56/130 (43%)
Query: 1 MASTTSIIAWGS---GEDGQLGIGNNEEREWVC--VVKALEPYKVRSVVAGSRNSLAICD 55
+A SI GS GEDG+ + + + ++K +E V + +S I
Sbjct: 559 VAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIK-MEGKIVVYTACNNGSSSVISK 617
Query: 56 DGKTKT---ENIPSQVNAL-SNTK---IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 108
DG+ + I S ++L ++ K + Q A+G H + G + +G N GQCG
Sbjct: 618 DGELYMFGKDAIYSDSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGR 677
Query: 109 EPERKDDTGR 118
+ + G+
Sbjct: 678 DTGAMNQGGK 687
>UNIPROTKB|Q7ZZC8 [details] [associations]
symbol:nek9 "Serine/threonine-protein kinase Nek9"
species:8355 "Xenopus laevis" [GO:0019901 "protein kinase binding"
evidence=ISS] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0019901
GO:GO:0051301 GO:GO:0007067 GO:GO:0046872 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOVERGEN:HBG039572 EMBL:AY271412 UniGene:Xl.77246
ProteinModelPortal:Q7ZZC8 Xenbase:XB-GENE-974105 Uniprot:Q7ZZC8
Length = 944
Score = 234 (87.4 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 64/223 (28%), Positives = 107/223 (47%)
Query: 146 SVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAW- 204
+VV +R V+ WG G + V +G + + + G H + + L+ W
Sbjct: 322 AVVTSRSSEVYVWGG----GKTTPQKLDV-FKGGWRARQVCAGDAHFAVVTVEKELYTWV 376
Query: 205 ----GNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGE 260
G+ +GQLG GD QP V+ L G ++ ++ G + +TD+G++Y +G
Sbjct: 377 NMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDY 436
Query: 261 HGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGY 320
+G LG + S + P V+ E + QVSCG +H +ALTR ++S+G G++GRLG
Sbjct: 437 YGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGL 496
Query: 321 GRKVTTGQPMEVPINIP-APRNAGDGVDRRWI----AKLVACG 358
+ P +V + N G D ++ K++ACG
Sbjct: 497 DSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTLTGKVLACG 539
Score = 192 (72.6 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 80/306 (26%), Positives = 133/306 (43%)
Query: 42 SVVAGSRNSLAICDDGKTKTENIPSQVNALSNT-KIVQAAIGGWHCLAVDDQGRAYAW-- 98
+VV + + + GKT P +++ + Q G H V + Y W
Sbjct: 322 AVVTSRSSEVYVWGGGKTT----PQKLDVFKGGWRARQVCAGDAHFAVVTVEKELYTWVN 377
Query: 99 --GGNE-YGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHV 155
GG++ +GQ G D R R ++ K V++V+ G +V +T EG +
Sbjct: 378 MQGGSKLHGQLGH-----GD--RASYRQPKHVEKLQGKS-VQKVSCGSDFTVCITDEGQL 429
Query: 156 WTWGQPWPPGDI-------KQISVPVRVQGL--EQVKLIAVGAFHNLALQEDGALWAWGN 206
+++G + G + ++ P+ V E V ++ G H +AL ++++WG
Sbjct: 430 YSFGSDYY-GCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALTRSKSVYSWGC 488
Query: 207 NEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGF 266
EYG+LG P V+ GL +V++ G S LT G+V G EH +LG
Sbjct: 489 GEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGL 548
Query: 267 GD------NDKSSKMVPQKVNL-LAGE----DIVQVSCGGTHSVALTRDGHIFSFGRGDH 315
N ++ + VP +L LA + I +S G TH+ A+ G + +FG
Sbjct: 549 NQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKC 608
Query: 316 GRLGYG 321
G+LG G
Sbjct: 609 GQLGVG 614
Score = 152 (58.6 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 60/208 (28%), Positives = 91/208 (43%)
Query: 174 VRVQ-GLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGD------TQPRSQPIP- 225
V VQ GL V + G+ + L G + A G NE+ +LG Q +P
Sbjct: 508 VEVQRGLCIVN-VCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPY 566
Query: 226 ------VQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 279
+ LS + I+ G H+ A+ + G + +G + G+LG GD K +
Sbjct: 567 TTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHLG-INLL 625
Query: 280 VNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
L G+ +++VSCG + A T D HIF++G G +GRL +P I P
Sbjct: 626 GGPLGGKQVIRVSCGDEFTTAATADNHIFAWGNGGNGRLAM---TPNERPQGSDICTSWP 682
Query: 340 RNAGDGVDRRWIAKLVACGGRHTLAIVE 367
R + + L +C G HT+ IVE
Sbjct: 683 RPIFGSLHH--VTDL-SCRGWHTILIVE 707
Score = 54 (24.1 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 11 GSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK 58
GS GQLG G+ V+ L+ V+ V GS ++ I D+G+
Sbjct: 381 GSKLHGQLGHGDRASYRQPKHVEKLQGKSVQKVSCGSDFTVCITDEGQ 428
>RGD|1312048 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2, E3 ubiquitin protein
ligase" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0015630 "microtubule
cytoskeleton" evidence=ISO] [GO:0021785 "branchiomotor neuron axon
guidance" evidence=ISO] [GO:0021952 "central nervous system
projection neuron axonogenesis" evidence=ISO] [GO:0030424 "axon"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0048667 "cell morphogenesis involved in neuron
differentiation" evidence=ISO] [GO:0051493 "regulation of
cytoskeleton organization" evidence=ISO] InterPro:IPR027047
RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR014756 SUPFAM:SSF81296 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 EMBL:CH473951
PANTHER:PTHR12846 IPI:IPI00950595 UniGene:Rn.13538
Ensembl:ENSRNOT00000064927 UCSC:RGD:1312048 Uniprot:D4A722
Length = 2667
Score = 170 (64.9 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 51/138 (36%), Positives = 71/138 (51%)
Query: 235 VDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCG 294
V ++ G HS L ++G+VY +G G+HG+LG GD +S+ P V L G QV+ G
Sbjct: 919 VQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGD--VNSRGCPTLVQALPGPS-TQVTAG 975
Query: 295 GTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPI-NI-PAPR-NAGDGVDRR-- 349
H+ L DG +F+FG G+LG R + ++VP N PAP N G R+
Sbjct: 976 SNHTAVLVMDGQVFTFGSFSKGQLG--RPI-----LDVPYWNAKPAPMPNIGSKYGRKAT 1028
Query: 350 WIAKLVACGGRHTLAIVE 367
WI A G + L I E
Sbjct: 1029 WIG---ASGDQTFLRIDE 1043
Score = 145 (56.1 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 35/104 (33%), Positives = 56/104 (53%)
Query: 162 WPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS 221
+PPG ++ VR V+ ++ G H++ L E+G ++ +G ++GQLG GD R
Sbjct: 905 YPPGSVR-FDCEVRA-----VQ-VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRG 957
Query: 222 QPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLG 265
P VQ L G + + AG H+ L DG+V+ +G G+LG
Sbjct: 958 CPTLVQALPGPS-TQVTAGSNHTAVLVMDGQVFTFGSFSKGQLG 1000
Score = 123 (48.4 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 43/179 (24%), Positives = 80/179 (44%)
Query: 46 GSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIG--GWHCLAVDDQGRAYAWGGNEY 103
G SL I G + + + + + KIV ++G G H L V + G + G
Sbjct: 530 GKYQSLGIKQGGPSAGKWVELPIT--KSPKIVHFSVGHDGSHALLVAEDGSVFFTGSASK 587
Query: 104 GQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWP 163
G+ GE + + + + I+ + K++V G+ SV+ +++G ++ +G+
Sbjct: 588 GEDGESAKSRRQSKPYKPKKII---KMEGKIVVCTACNNGSSSVI-SKDGELYMFGKDAI 643
Query: 164 PGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ 222
D + ++ + QV A+G H L ++G +W +G N GQ G DT +Q
Sbjct: 644 YSDSSSLVSDLKGHFVTQV---AMGKAHTCVLMKNGEVWTFGVNNKGQCGR-DTGAMNQ 698
Score = 123 (48.4 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 30/78 (38%), Positives = 39/78 (50%)
Query: 262 GRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYG 321
G G D K + P V VQVSCG HSV L +G +++FG G HG+LG+G
Sbjct: 892 GERGEKDASKVTTYPPGSVRFDCEVRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHG 951
Query: 322 RKVTTGQPMEVPINIPAP 339
+ G P V +P P
Sbjct: 952 DVNSRGCPTLVQA-LPGP 968
Score = 72 (30.4 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 32/130 (24%), Positives = 56/130 (43%)
Query: 1 MASTTSIIAWGS---GEDGQLGIGNNEEREWVC--VVKALEPYKVRSVVAGSRNSLAICD 55
+A S+ GS GEDG+ + + + ++K +E V + +S I
Sbjct: 573 VAEDGSVFFTGSASKGEDGESAKSRRQSKPYKPKKIIK-MEGKIVVCTACNNGSSSVISK 631
Query: 56 DGKTKT---ENIPSQVNAL-SNTK---IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 108
DG+ + I S ++L S+ K + Q A+G H + G + +G N GQCG
Sbjct: 632 DGELYMFGKDAIYSDSSSLVSDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGR 691
Query: 109 EPERKDDTGR 118
+ + G+
Sbjct: 692 DTGAMNQGGK 701
>UNIPROTKB|F1RP77 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051493 "regulation of cytoskeleton organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021785 OMA:LLSILHW EMBL:CU457401 EMBL:CT978653 EMBL:CU041349
Ensembl:ENSSSCT00000010386 Uniprot:F1RP77
Length = 4460
Score = 171 (65.3 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 52/141 (36%), Positives = 72/141 (51%)
Query: 232 LTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQV 291
L V ++ G HS L ++G+VY +G G+HG+LG GD +S+ P V L G QV
Sbjct: 815 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGD--VNSRGCPTLVQALPGPS-TQV 871
Query: 292 SCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPI-NI-PAPR-NAGDGVDR 348
+ G H+ L DG +F+FG G+LG R + ++VP N PAP N G R
Sbjct: 872 TAGSNHTAVLLMDGQVFTFGSFSKGQLG--RPI-----LDVPYWNAKPAPMPNIGSKYGR 924
Query: 349 R--WIAKLVACGGRHTLAIVE 367
+ WI A G + L I E
Sbjct: 925 KATWIG---ASGDQTFLRIDE 942
Score = 141 (54.7 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 34/104 (32%), Positives = 56/104 (53%)
Query: 162 WPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS 221
+PPG ++ +R V+ ++ G H++ L E+G ++ +G ++GQLG GD R
Sbjct: 804 YPPGSVR-FDCELRA-----VQ-VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRG 856
Query: 222 QPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLG 265
P VQ L G + + AG H+ L DG+V+ +G G+LG
Sbjct: 857 CPTLVQALPGPS-TQVTAGSNHTAVLLMDGQVFTFGSFSKGQLG 899
Score = 125 (49.1 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 43/179 (24%), Positives = 80/179 (44%)
Query: 46 GSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIG--GWHCLAVDDQGRAYAWGGNEY 103
G SL I G + + + + + KIV ++G G H L V + G + G
Sbjct: 429 GKYQSLGIKQGGPSAGKWVELPIT--KSPKIVHFSVGHDGSHALLVAEDGSIFFTGSASK 486
Query: 104 GQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWP 163
G+ GE + + + + I+ + K++V G+ SV+ +++G ++ +G+
Sbjct: 487 GEDGESTKSRRQSKPYKPKKII---KMEGKIVVYTACNNGSSSVI-SKDGELYMFGKDAI 542
Query: 164 PGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ 222
D + ++ + QV A+G H L ++G +W +G N GQ G DT +Q
Sbjct: 543 YSDSSSLVTDLKGHFVTQV---AMGKAHTCVLMKNGEVWTFGVNNKGQCGR-DTGAMNQ 597
Score = 125 (49.1 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 34/97 (35%), Positives = 45/97 (46%)
Query: 243 HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALT 302
H L + + G GE G D K + P V VQVSCG HSV L
Sbjct: 775 HPAQLKHKRDKHKDGSGERGEK---DASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLM 831
Query: 303 RDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
+G +++FG G HG+LG+G + G P V +P P
Sbjct: 832 ENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA-LPGP 867
Score = 67 (28.6 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 32/130 (24%), Positives = 56/130 (43%)
Query: 1 MASTTSIIAWGS---GEDGQLGIGNNEEREWVC--VVKALEPYKVRSVVAGSRNSLAICD 55
+A SI GS GEDG+ + + + ++K +E V + +S I
Sbjct: 472 VAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIK-MEGKIVVYTACNNGSSSVISK 530
Query: 56 DGKTKT---ENIPSQVNAL-SNTK---IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 108
DG+ + I S ++L ++ K + Q A+G H + G + +G N GQCG
Sbjct: 531 DGELYMFGKDAIYSDSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGR 590
Query: 109 EPERKDDTGR 118
+ + G+
Sbjct: 591 DTGAMNQGGK 600
>UNIPROTKB|F1PB36 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
EMBL:AAEX03013255 EMBL:AAEX03013256 EMBL:AAEX03013257
Ensembl:ENSCAFT00000008311 Uniprot:F1PB36
Length = 4640
Score = 171 (65.3 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 52/141 (36%), Positives = 72/141 (51%)
Query: 232 LTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQV 291
L V ++ G HS L ++G+VY +G G+HG+LG GD +S+ P V L G QV
Sbjct: 902 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGD--VNSRGCPTLVQALPGPS-TQV 958
Query: 292 SCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPI-NI-PAPR-NAGDGVDR 348
+ G H+ L DG +F+FG G+LG R + ++VP N PAP N G R
Sbjct: 959 TAGSNHTAVLLMDGQVFTFGSFSKGQLG--RPI-----LDVPYWNAKPAPMPNIGSKYGR 1011
Query: 349 R--WIAKLVACGGRHTLAIVE 367
+ WI A G + L I E
Sbjct: 1012 KATWIG---ASGDQTFLRIDE 1029
Score = 141 (54.7 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 34/104 (32%), Positives = 56/104 (53%)
Query: 162 WPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS 221
+PPG ++ +R V+ ++ G H++ L E+G ++ +G ++GQLG GD R
Sbjct: 891 YPPGSVR-FDCELRA-----VQ-VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRG 943
Query: 222 QPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLG 265
P VQ L G + + AG H+ L DG+V+ +G G+LG
Sbjct: 944 CPTLVQALPGPS-TQVTAGSNHTAVLLMDGQVFTFGSFSKGQLG 986
Score = 125 (49.1 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 43/179 (24%), Positives = 80/179 (44%)
Query: 46 GSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIG--GWHCLAVDDQGRAYAWGGNEY 103
G SL I G + + + + + KIV ++G G H L V + G + G
Sbjct: 516 GKYQSLGIKQGGPSAGKWVELPIT--KSPKIVHFSVGHDGSHALLVAEDGSIFFTGSASK 573
Query: 104 GQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWP 163
G+ GE + + + + I+ + K++V G+ SV+ +++G ++ +G+
Sbjct: 574 GEDGESTKSRRQSKPYKPKKII---KMEGKIVVYTACNNGSSSVI-SKDGELYMFGKDAI 629
Query: 164 PGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ 222
D + ++ + QV A+G H L ++G +W +G N GQ G DT +Q
Sbjct: 630 YSDSSSLVTDLKGHFVTQV---AMGKAHTCVLMKNGEVWTFGVNNKGQCGR-DTGAMNQ 684
Score = 125 (49.1 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 34/97 (35%), Positives = 45/97 (46%)
Query: 243 HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALT 302
H L + + G GE G D K + P V VQVSCG HSV L
Sbjct: 862 HPAQLKHKRDKHKDGSGERGEK---DASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLM 918
Query: 303 RDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
+G +++FG G HG+LG+G + G P V +P P
Sbjct: 919 ENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA-LPGP 954
Score = 67 (28.6 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 32/130 (24%), Positives = 56/130 (43%)
Query: 1 MASTTSIIAWGS---GEDGQLGIGNNEEREWVC--VVKALEPYKVRSVVAGSRNSLAICD 55
+A SI GS GEDG+ + + + ++K +E V + +S I
Sbjct: 559 VAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIK-MEGKIVVYTACNNGSSSVISK 617
Query: 56 DGKTKT---ENIPSQVNAL-SNTK---IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 108
DG+ + I S ++L ++ K + Q A+G H + G + +G N GQCG
Sbjct: 618 DGELYMFGKDAIYSDSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGR 677
Query: 109 EPERKDDTGR 118
+ + G+
Sbjct: 678 DTGAMNQGGK 687
>UNIPROTKB|O75592 [details] [associations]
symbol:MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0015630 "microtubule cytoskeleton"
evidence=IEA] [GO:0021785 "branchiomotor neuron axon guidance"
evidence=IEA] [GO:0021952 "central nervous system projection neuron
axonogenesis" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0051493 "regulation of cytoskeleton organization" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
Prosite:PS00518 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0015630 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 GO:GO:0006351
GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 CleanEx:HS_PAM InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005 EMBL:AC001226
InterPro:IPR017868 EMBL:CH471093 PROSITE:PS50194 KO:K10693
PANTHER:PTHR12846 EMBL:AF075587 EMBL:AL159154 EMBL:AL159158
EMBL:AL359257 EMBL:AB020723 EMBL:BC037971 EMBL:AF083244
IPI:IPI00289776 IPI:IPI01014189 RefSeq:NP_055872.4
UniGene:Hs.591221 ProteinModelPortal:O75592 SMR:O75592
DIP:DIP-28142N IntAct:O75592 MINT:MINT-1632199 STRING:O75592
PhosphoSite:O75592 PaxDb:O75592 PRIDE:O75592
Ensembl:ENST00000357337 Ensembl:ENST00000544440 GeneID:23077
KEGG:hsa:23077 UCSC:uc010aev.3 CTD:23077 GeneCards:GC13M077618
HGNC:HGNC:23386 HPA:HPA039945 MIM:610392 neXtProt:NX_O75592
PharmGKB:PA134871126 eggNOG:NOG240798 HOVERGEN:HBG053153
InParanoid:O75592 OrthoDB:EOG4VQ9NB ChiTaRS:MYCBP2 GenomeRNAi:23077
NextBio:44191 ArrayExpress:O75592 Bgee:O75592 CleanEx:HS_MYCBP2
Genevestigator:O75592 GermOnline:ENSG00000005810 GO:GO:0021785
Uniprot:O75592
Length = 4640
Score = 171 (65.3 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 52/141 (36%), Positives = 72/141 (51%)
Query: 232 LTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQV 291
L V ++ G HS L ++G+VY +G G+HG+LG GD +S+ P V L G QV
Sbjct: 902 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGD--VNSRGCPTLVQALPGPS-TQV 958
Query: 292 SCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPI-NI-PAPR-NAGDGVDR 348
+ G H+ L DG +F+FG G+LG R + ++VP N PAP N G R
Sbjct: 959 TAGSNHTAVLLMDGQVFTFGSFSKGQLG--RPI-----LDVPYWNAKPAPMPNIGSKYGR 1011
Query: 349 R--WIAKLVACGGRHTLAIVE 367
+ WI A G + L I E
Sbjct: 1012 KATWIG---ASGDQTFLRIDE 1029
Score = 141 (54.7 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 34/104 (32%), Positives = 56/104 (53%)
Query: 162 WPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS 221
+PPG ++ +R V+ ++ G H++ L E+G ++ +G ++GQLG GD R
Sbjct: 891 YPPGSVR-FDCELRA-----VQ-VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRG 943
Query: 222 QPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLG 265
P VQ L G + + AG H+ L DG+V+ +G G+LG
Sbjct: 944 CPTLVQALPGPS-TQVTAGSNHTAVLLMDGQVFTFGSFSKGQLG 986
Score = 125 (49.1 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 43/179 (24%), Positives = 80/179 (44%)
Query: 46 GSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIG--GWHCLAVDDQGRAYAWGGNEY 103
G SL I G + + + + + KIV ++G G H L V + G + G
Sbjct: 516 GKYQSLGIKQGGPSAGKWVELPIT--KSPKIVHFSVGHDGSHALLVAEDGSIFFTGSASK 573
Query: 104 GQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWP 163
G+ GE + + + + I+ + K++V G+ SV+ +++G ++ +G+
Sbjct: 574 GEDGESTKSRRQSKPYKPKKII---KMEGKIVVYTACNNGSSSVI-SKDGELYMFGKDAI 629
Query: 164 PGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ 222
D + ++ + QV A+G H L ++G +W +G N GQ G DT +Q
Sbjct: 630 YSDSSSLVTDLKGHFVTQV---AMGKAHTCVLMKNGEVWTFGVNNKGQCGR-DTGAMNQ 684
Score = 125 (49.1 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 34/97 (35%), Positives = 45/97 (46%)
Query: 243 HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALT 302
H L + + G GE G D K + P V VQVSCG HSV L
Sbjct: 862 HPAQLKHKRDKHKDGSGERGEK---DASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLM 918
Query: 303 RDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
+G +++FG G HG+LG+G + G P V +P P
Sbjct: 919 ENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA-LPGP 954
Score = 67 (28.6 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 32/130 (24%), Positives = 56/130 (43%)
Query: 1 MASTTSIIAWGS---GEDGQLGIGNNEEREWVC--VVKALEPYKVRSVVAGSRNSLAICD 55
+A SI GS GEDG+ + + + ++K +E V + +S I
Sbjct: 559 VAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIK-MEGKIVVYTACNNGSSSVISK 617
Query: 56 DGKTKT---ENIPSQVNAL-SNTK---IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 108
DG+ + I S ++L ++ K + Q A+G H + G + +G N GQCG
Sbjct: 618 DGELYMFGKDAIYSDSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGR 677
Query: 109 EPERKDDTGR 118
+ + G+
Sbjct: 678 DTGAMNQGGK 687
>UNIPROTKB|J3KPZ3 [details] [associations]
symbol:MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 InterPro:IPR008979 SUPFAM:SSF49785 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 EMBL:AC001226 InterPro:IPR017868
PROSITE:PS50194 KO:K10693 PANTHER:PTHR12846 EMBL:AL159154
EMBL:AL159158 EMBL:AL359257 RefSeq:NP_055872.4 UniGene:Hs.591221
GeneID:23077 KEGG:hsa:23077 CTD:23077 HGNC:HGNC:23386
ChiTaRS:MYCBP2 OMA:LLSILHW ProteinModelPortal:J3KPZ3
Ensembl:ENST00000407578 Uniprot:J3KPZ3
Length = 4678
Score = 171 (65.3 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 52/141 (36%), Positives = 72/141 (51%)
Query: 232 LTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQV 291
L V ++ G HS L ++G+VY +G G+HG+LG GD +S+ P V L G QV
Sbjct: 940 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGD--VNSRGCPTLVQALPGPS-TQV 996
Query: 292 SCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPI-NI-PAPR-NAGDGVDR 348
+ G H+ L DG +F+FG G+LG R + ++VP N PAP N G R
Sbjct: 997 TAGSNHTAVLLMDGQVFTFGSFSKGQLG--RPI-----LDVPYWNAKPAPMPNIGSKYGR 1049
Query: 349 R--WIAKLVACGGRHTLAIVE 367
+ WI A G + L I E
Sbjct: 1050 KATWIG---ASGDQTFLRIDE 1067
Score = 141 (54.7 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 34/104 (32%), Positives = 56/104 (53%)
Query: 162 WPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS 221
+PPG ++ +R V+ ++ G H++ L E+G ++ +G ++GQLG GD R
Sbjct: 929 YPPGSVR-FDCELRA-----VQ-VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRG 981
Query: 222 QPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLG 265
P VQ L G + + AG H+ L DG+V+ +G G+LG
Sbjct: 982 CPTLVQALPGPS-TQVTAGSNHTAVLLMDGQVFTFGSFSKGQLG 1024
Score = 125 (49.1 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 43/179 (24%), Positives = 80/179 (44%)
Query: 46 GSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIG--GWHCLAVDDQGRAYAWGGNEY 103
G SL I G + + + + + KIV ++G G H L V + G + G
Sbjct: 554 GKYQSLGIKQGGPSAGKWVELPIT--KSPKIVHFSVGHDGSHALLVAEDGSIFFTGSASK 611
Query: 104 GQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWP 163
G+ GE + + + + I+ + K++V G+ SV+ +++G ++ +G+
Sbjct: 612 GEDGESTKSRRQSKPYKPKKII---KMEGKIVVYTACNNGSSSVI-SKDGELYMFGKDAI 667
Query: 164 PGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ 222
D + ++ + QV A+G H L ++G +W +G N GQ G DT +Q
Sbjct: 668 YSDSSSLVTDLKGHFVTQV---AMGKAHTCVLMKNGEVWTFGVNNKGQCGR-DTGAMNQ 722
Score = 125 (49.1 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 34/97 (35%), Positives = 45/97 (46%)
Query: 243 HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALT 302
H L + + G GE G D K + P V VQVSCG HSV L
Sbjct: 900 HPAQLKHKRDKHKDGSGERGEK---DASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLM 956
Query: 303 RDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
+G +++FG G HG+LG+G + G P V +P P
Sbjct: 957 ENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA-LPGP 992
Score = 67 (28.6 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 32/130 (24%), Positives = 56/130 (43%)
Query: 1 MASTTSIIAWGS---GEDGQLGIGNNEEREWVC--VVKALEPYKVRSVVAGSRNSLAICD 55
+A SI GS GEDG+ + + + ++K +E V + +S I
Sbjct: 597 VAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIK-MEGKIVVYTACNNGSSSVISK 655
Query: 56 DGKTKT---ENIPSQVNAL-SNTK---IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 108
DG+ + I S ++L ++ K + Q A+G H + G + +G N GQCG
Sbjct: 656 DGELYMFGKDAIYSDSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGR 715
Query: 109 EPERKDDTGR 118
+ + G+
Sbjct: 716 DTGAMNQGGK 725
>UNIPROTKB|J9PB77 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 PROSITE:PS00626 PROSITE:PS50012
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
GeneTree:ENSGT00390000011403 PANTHER:PTHR12846 OMA:LLSILHW
EMBL:AAEX03013255 EMBL:AAEX03013256 EMBL:AAEX03013257
Ensembl:ENSCAFT00000044597 Uniprot:J9PB77
Length = 4727
Score = 171 (65.3 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 52/141 (36%), Positives = 72/141 (51%)
Query: 232 LTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQV 291
L V ++ G HS L ++G+VY +G G+HG+LG GD +S+ P V L G QV
Sbjct: 940 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGD--VNSRGCPTLVQALPGPS-TQV 996
Query: 292 SCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPI-NI-PAPR-NAGDGVDR 348
+ G H+ L DG +F+FG G+LG R + ++VP N PAP N G R
Sbjct: 997 TAGSNHTAVLLMDGQVFTFGSFSKGQLG--RPI-----LDVPYWNAKPAPMPNIGSKYGR 1049
Query: 349 R--WIAKLVACGGRHTLAIVE 367
+ WI A G + L I E
Sbjct: 1050 KATWIG---ASGDQTFLRIDE 1067
Score = 141 (54.7 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 34/104 (32%), Positives = 56/104 (53%)
Query: 162 WPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS 221
+PPG ++ +R V+ ++ G H++ L E+G ++ +G ++GQLG GD R
Sbjct: 929 YPPGSVR-FDCELRA-----VQ-VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRG 981
Query: 222 QPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLG 265
P VQ L G + + AG H+ L DG+V+ +G G+LG
Sbjct: 982 CPTLVQALPGPS-TQVTAGSNHTAVLLMDGQVFTFGSFSKGQLG 1024
Score = 125 (49.1 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 43/179 (24%), Positives = 80/179 (44%)
Query: 46 GSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIG--GWHCLAVDDQGRAYAWGGNEY 103
G SL I G + + + + + KIV ++G G H L V + G + G
Sbjct: 554 GKYQSLGIKQGGPSAGKWVELPIT--KSPKIVHFSVGHDGSHALLVAEDGSIFFTGSASK 611
Query: 104 GQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWP 163
G+ GE + + + + I+ + K++V G+ SV+ +++G ++ +G+
Sbjct: 612 GEDGESTKSRRQSKPYKPKKII---KMEGKIVVYTACNNGSSSVI-SKDGELYMFGKDAI 667
Query: 164 PGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ 222
D + ++ + QV A+G H L ++G +W +G N GQ G DT +Q
Sbjct: 668 YSDSSSLVTDLKGHFVTQV---AMGKAHTCVLMKNGEVWTFGVNNKGQCGR-DTGAMNQ 722
Score = 125 (49.1 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 34/97 (35%), Positives = 45/97 (46%)
Query: 243 HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALT 302
H L + + G GE G D K + P V VQVSCG HSV L
Sbjct: 900 HPAQLKHKRDKHKDGSGERGEK---DASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLM 956
Query: 303 RDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
+G +++FG G HG+LG+G + G P V +P P
Sbjct: 957 ENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA-LPGP 992
Score = 67 (28.6 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 32/130 (24%), Positives = 56/130 (43%)
Query: 1 MASTTSIIAWGS---GEDGQLGIGNNEEREWVC--VVKALEPYKVRSVVAGSRNSLAICD 55
+A SI GS GEDG+ + + + ++K +E V + +S I
Sbjct: 597 VAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIK-MEGKIVVYTACNNGSSSVISK 655
Query: 56 DGKTKT---ENIPSQVNAL-SNTK---IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 108
DG+ + I S ++L ++ K + Q A+G H + G + +G N GQCG
Sbjct: 656 DGELYMFGKDAIYSDSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGR 715
Query: 109 EPERKDDTGR 118
+ + G+
Sbjct: 716 DTGAMNQGGK 725
>UNIPROTKB|F1NDJ4 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104312 EMBL:AADN02038799 IPI:IPI00812606
Ensembl:ENSGALT00000038135 OMA:GHKDTSS Uniprot:F1NDJ4
Length = 221
Score = 148 (57.2 bits), Expect = 5.3e-16, Sum P(2) = 5.3e-16
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 207 NEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLG 265
+ +GQLG G + QP V+ L G+ + +AAGGWHS ++D G++Y WG E G+LG
Sbjct: 8 HRHGQLGHGSLESEQQPRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLG 66
Score = 132 (51.5 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 53/179 (29%), Positives = 82/179 (45%)
Query: 136 VRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLAL 195
+R VAAGG HS ++ G ++ WG W + Q+ +P R EQ + +GA
Sbjct: 35 MRAVAAGGWHSACVSDGGDLYVWG--W--NESGQLGLPSRAVAEEQAEDEDMGAG----- 85
Query: 196 QEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYG 255
ED L G + P +P++ + ++ G H+ ALT GE+
Sbjct: 86 PEDPLLP--GEPPGAAFISIQAFPALLDLPLEP----AVAAVSCGSRHTAALTRGGELNT 139
Query: 256 WGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDI--VQVSCG--GTHSVAL----TRDGH 306
WG G++G+LG GD ++S P++V L E + +V CG T+ L RD H
Sbjct: 140 WGWGKYGQLGHGD--RASCDHPRRVEQLWAEGLRAQEVVCGPWNTYVCVLQQGEARDSH 196
Score = 111 (44.1 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 22/51 (43%), Positives = 25/51 (49%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 107
G ++E P V AL + A GGWH V D G Y WG NE GQ G
Sbjct: 16 GSLESEQQPRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLG 66
Score = 103 (41.3 bits), Expect = 5.3e-16, Sum P(2) = 5.3e-16
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 272 SSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPME 331
S + P ++L + VSCG H+ ALTR G + ++G G +G+LG+G + + P
Sbjct: 102 SIQAFPALLDLPLEPAVAAVSCGSRHTAALTRGGELNTWGWGKYGQLGHGDRASCDHPRR 161
Query: 332 V 332
V
Sbjct: 162 V 162
Score = 83 (34.3 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 165 GDIKQISVPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLG 213
G ++ P V+ L V + +A G +H+ + + G L+ WG NE GQLG
Sbjct: 16 GSLESEQQPRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLG 66
Score = 65 (27.9 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 16 GQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDG 57
GQLG G+ E + +V+AL +R+V AG +S + D G
Sbjct: 11 GQLGHGSLESEQQPRLVEALGGVPMRAVAAGGWHSACVSDGG 52
Score = 43 (20.2 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 355 VACGGRHTLAI 365
V+CG RHT A+
Sbjct: 121 VSCGSRHTAAL 131
>UNIPROTKB|D4A2D3 [details] [associations]
symbol:Mycbp2 "Protein Mycbp2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
OrthoDB:EOG4VQ9NB GO:GO:0021785 IPI:IPI00765932
ProteinModelPortal:D4A2D3 Ensembl:ENSRNOT00000014583
ArrayExpress:D4A2D3 Uniprot:D4A2D3
Length = 4715
Score = 170 (64.9 bits), Expect = 6.4e-16, Sum P(2) = 6.4e-16
Identities = 51/138 (36%), Positives = 71/138 (51%)
Query: 235 VDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCG 294
V ++ G HS L ++G+VY +G G+HG+LG GD +S+ P V L G QV+ G
Sbjct: 905 VQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGD--VNSRGCPTLVQALPGPS-TQVTAG 961
Query: 295 GTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPI-NI-PAPR-NAGDGVDRR-- 349
H+ L DG +F+FG G+LG R + ++VP N PAP N G R+
Sbjct: 962 SNHTAVLVMDGQVFTFGSFSKGQLG--RPI-----LDVPYWNAKPAPMPNIGSKYGRKAT 1014
Query: 350 WIAKLVACGGRHTLAIVE 367
WI A G + L I E
Sbjct: 1015 WIG---ASGDQTFLRIDE 1029
Score = 145 (56.1 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 35/104 (33%), Positives = 56/104 (53%)
Query: 162 WPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS 221
+PPG ++ VR V+ ++ G H++ L E+G ++ +G ++GQLG GD R
Sbjct: 891 YPPGSVR-FDCEVRA-----VQ-VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRG 943
Query: 222 QPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLG 265
P VQ L G + + AG H+ L DG+V+ +G G+LG
Sbjct: 944 CPTLVQALPGPS-TQVTAGSNHTAVLVMDGQVFTFGSFSKGQLG 986
Score = 123 (48.4 bits), Expect = 6.4e-16, Sum P(2) = 6.4e-16
Identities = 43/179 (24%), Positives = 80/179 (44%)
Query: 46 GSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIG--GWHCLAVDDQGRAYAWGGNEY 103
G SL I G + + + + + KIV ++G G H L V + G + G
Sbjct: 516 GKYQSLGIKQGGPSAGKWVELPIT--KSPKIVHFSVGHDGSHALLVAEDGSVFFTGSASK 573
Query: 104 GQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWP 163
G+ GE + + + + I+ + K++V G+ SV+ +++G ++ +G+
Sbjct: 574 GEDGESAKSRRQSKPYKPKKII---KMEGKIVVCTACNNGSSSVI-SKDGELYMFGKDAI 629
Query: 164 PGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ 222
D + ++ + QV A+G H L ++G +W +G N GQ G DT +Q
Sbjct: 630 YSDSSSLVSDLKGHFVTQV---AMGKAHTCVLMKNGEVWTFGVNNKGQCGR-DTGAMNQ 684
Score = 123 (48.4 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 30/78 (38%), Positives = 39/78 (50%)
Query: 262 GRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYG 321
G G D K + P V VQVSCG HSV L +G +++FG G HG+LG+G
Sbjct: 878 GERGEKDASKVTTYPPGSVRFDCEVRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHG 937
Query: 322 RKVTTGQPMEVPINIPAP 339
+ G P V +P P
Sbjct: 938 DVNSRGCPTLVQA-LPGP 954
Score = 72 (30.4 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 32/130 (24%), Positives = 56/130 (43%)
Query: 1 MASTTSIIAWGS---GEDGQLGIGNNEEREWVC--VVKALEPYKVRSVVAGSRNSLAICD 55
+A S+ GS GEDG+ + + + ++K +E V + +S I
Sbjct: 559 VAEDGSVFFTGSASKGEDGESAKSRRQSKPYKPKKIIK-MEGKIVVCTACNNGSSSVISK 617
Query: 56 DGKTKT---ENIPSQVNAL-SNTK---IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 108
DG+ + I S ++L S+ K + Q A+G H + G + +G N GQCG
Sbjct: 618 DGELYMFGKDAIYSDSSSLVSDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGR 677
Query: 109 EPERKDDTGR 118
+ + G+
Sbjct: 678 DTGAMNQGGK 687
>ZFIN|ZDB-GENE-030616-132 [details] [associations]
symbol:mycbp2 "MYC binding protein 2" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0021986 "habenula
development" evidence=IMP] [GO:0016198 "axon choice point
recognition" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0042068 "regulation of pteridine
metabolic process" evidence=IMP] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-030616-132
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
GO:GO:0008270 GO:GO:0016198 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284 GO:GO:0031290
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021986 EMBL:BX510646 EMBL:AL840634 EMBL:CR628366
EMBL:CU138551 IPI:IPI00993071 Ensembl:ENSDART00000124901
ArrayExpress:F1QI76 Bgee:F1QI76 GO:GO:0042068 Uniprot:F1QI76
Length = 4648
Score = 164 (62.8 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 36/89 (40%), Positives = 50/89 (56%)
Query: 232 LTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGD-NDKSSKMVPQKVNLLAGEDIVQ 290
L V ++ G HS L ++G+VY +G G+HG+LG GD N + S P V L G Q
Sbjct: 925 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGS---PTLVQALPGPS-TQ 980
Query: 291 VSCGGTHSVALTRDGHIFSFGRGDHGRLG 319
V+ G H+ L DG +F+FG G+LG
Sbjct: 981 VTAGSNHTAVLLMDGQVFTFGSFSKGQLG 1009
Score = 143 (55.4 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 29/81 (35%), Positives = 46/81 (56%)
Query: 185 IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHS 244
++ G H++ L E+G ++ +G ++GQLG GD R P VQ L G + + AG H+
Sbjct: 930 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGSPTLVQALPGPS-TQVTAGSNHT 988
Query: 245 TALTDDGEVYGWGRGEHGRLG 265
L DG+V+ +G G+LG
Sbjct: 989 AVLLMDGQVFTFGSFSKGQLG 1009
Score = 127 (49.8 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 51/195 (26%), Positives = 86/195 (44%)
Query: 46 GSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIG--GWHCLAVDDQGRAYAWGGNEY 103
G SL I G + + + V + KIVQ ++G G H L V + G + G
Sbjct: 545 GKYQSLGIKQGGPSSGKWVELPVT--KSPKIVQFSVGHDGSHALLVAEDGSVFFTGSASK 602
Query: 104 GQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWP 163
G+ GE + + + ++ + K+ V G+ S+V T++G ++ +G+
Sbjct: 603 GEDGESTKSRRQPKPYKPKKMI---KLETKMAVYTACNNGSSSIV-TKDGELYMFGKDAI 658
Query: 164 PGDIK-QISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ 222
D Q+S ++G V +A+G H L + G +W +G N GQ G DT SQ
Sbjct: 659 YSDSTCQVS---DLKG-HFVTQVAMGKAHTCVLTKSGEVWTFGVNNKGQCGR-DTGAMSQ 713
Query: 223 PIPVQGLSGL-TLVD 236
G+ + T +D
Sbjct: 714 AGKAFGVENMATAMD 728
Score = 122 (48.0 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 30/75 (40%), Positives = 39/75 (52%)
Query: 267 GDNDKS--SKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKV 324
GD D S + P V VQVSCG HSV L +G +++FG G HG+LG+G
Sbjct: 904 GDKDASKITTYPPGAVRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVN 963
Query: 325 TTGQPMEVPINIPAP 339
+ G P V +P P
Sbjct: 964 SRGSPTLVQA-LPGP 977
Score = 83 (34.3 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 33/145 (22%), Positives = 57/145 (39%)
Query: 124 IVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGD---IKQISVPVRVQGLE 180
+ +P +PK++ V G+H++++ +G V+ G D K P + +
Sbjct: 563 VELPVTKSPKIVQFSVGHDGSHALLVAEDGSVFFTGSASKGEDGESTKSRRQPKPYKPKK 622
Query: 181 QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAG 240
+KL A + A + + E G D V L G + +A G
Sbjct: 623 MIKLETKMAVYT-ACNNGSSSIVTKDGELYMFGK-DAIYSDSTCQVSDLKGHFVTQVAMG 680
Query: 241 GWHSTALTDDGEVYGWGRGEHGRLG 265
H+ LT GEV+ +G G+ G
Sbjct: 681 KAHTCVLTKSGEVWTFGVNNKGQCG 705
Score = 38 (18.4 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 302 TRDGHIFSFGRGDHGRLGYGRKVTTG 327
+ D ++ G G G G + V TG
Sbjct: 2554 SHDANVLDLGAGQSGGPGLYKVVKTG 2579
>UNIPROTKB|F1MD33 [details] [associations]
symbol:F1MD33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104160 EMBL:DAAA02073693
IPI:IPI00698306 Ensembl:ENSBTAT00000005090 OMA:SAEKHET
Uniprot:F1MD33
Length = 158
Score = 201 (75.8 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 50/133 (37%), Positives = 73/133 (54%)
Query: 199 GALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLV-DIAAGGWHSTALTDDGEVYGWG 257
G ++A G N GQLG GDT RS + + + ++AG S ALT +GE+Y +G
Sbjct: 3 GQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTAEGELYTFG 62
Query: 258 RGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGR 317
E G+LG + VPQ V ++ E ++QV+CGG H+V LT +++FG G G+
Sbjct: 63 EPESGKLGLPPKLLVNHKVPQLVPGIS-EKVIQVACGGGHTVVLTEKA-VYTFGLGQFGQ 120
Query: 318 LGYGR-KVTTGQP 329
LG G T +P
Sbjct: 121 LGLGTFTFETSEP 133
Score = 154 (59.3 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 49/164 (29%), Positives = 78/164 (47%)
Query: 93 GRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTRE 152
G+ YA GGN GQ G DT R + + ++Q++AG S LT E
Sbjct: 3 GQVYATGGNNEGQLG-----LGDTDE--RSAFHLISFFTSQHKIKQLSAGSNTSAALTAE 55
Query: 153 GHVWTWGQP------WPPGDIKQISVPVRVQGL-EQVKLIAVGAFHNLALQEDGALWAWG 205
G ++T+G+P PP + VP V G+ E+V +A G H + L E A++ +G
Sbjct: 56 GELYTFGEPESGKLGLPPKLLVNHKVPQLVPGISEKVIQVACGGGHTVVLTEK-AVYTFG 114
Query: 206 NNEYGQLGTGD-TQPRSQPIPVQGLSGLTLVDIAAGGWHSTALT 248
++GQLG G T S+P ++ + + + G H+ +T
Sbjct: 115 LGQFGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALIT 158
Score = 149 (57.5 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 39/118 (33%), Positives = 59/118 (50%)
Query: 251 GEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGED-IVQVSCGGTHSVALTRDGHIFS 309
G+VY G G+LG GD D+ S ++ + I Q+S G S ALT +G +++
Sbjct: 3 GQVYATGGNNEGQLGLGDTDERSAF--HLISFFTSQHKIKQLSAGSNTSAALTAEGELYT 60
Query: 310 FGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
FG + G+LG K+ +VP +P G+ + I VACGG HT+ + E
Sbjct: 61 FGEPESGKLGLPPKLLVNH--KVPQLVP-------GISEKVIQ--VACGGGHTVVLTE 107
Score = 142 (55.0 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 37/125 (29%), Positives = 67/125 (53%)
Query: 181 QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIP--VQGLSGLTLVDIA 238
++K ++ G+ + AL +G L+ +G E G+LG + +P V G+S ++ +A
Sbjct: 38 KIKQLSAGSNTSAALTAEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPGISE-KVIQVA 96
Query: 239 AGGWHSTALTDDGEVYGWGRGEHGRLGFGD-NDKSSKMVPQKVNLLAGEDIVQVSCGGTH 297
GG H+ LT+ VY +G G+ G+LG G ++S+ P+ + + + I V CG H
Sbjct: 97 CGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFTFETSE--PKVIESVKDKKISHVCCGENH 153
Query: 298 SVALT 302
+ +T
Sbjct: 154 TALIT 158
Score = 82 (33.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKAL-EPYKVRSVVAGSRNSLAICDDGKTKTENIP 65
+ A G +GQLG+G+ +ER ++ +K++ + AGS S A+ +G+ T P
Sbjct: 5 VYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTAEGELYTFGEP 64
Score = 69 (29.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 64 IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 107
+P V +S K++Q A GG H + + ++ Y +G ++GQ G
Sbjct: 81 VPQLVPGISE-KVIQVACGGGHTVVLTEKA-VYTFGLGQFGQLG 122
>UNIPROTKB|F1S2Q4 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:CT737372 Ensembl:ENSSSCT00000002648 Uniprot:F1S2Q4
Length = 1004
Score = 226 (84.6 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 64/223 (28%), Positives = 105/223 (47%)
Query: 146 SVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWG 205
+VV +R V+ WG G + V G + + G H + + L+ W
Sbjct: 359 AVVTSRTSEVYVWGG----GKSTPQKLDVIKSGCS-ARQVCAGNTHFAVVTVEKELYTWV 413
Query: 206 NNE-----YGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGE 260
N + +GQLG GD QP V+ L G + ++ G + +TD+G++Y +G
Sbjct: 414 NMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDY 473
Query: 261 HGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGY 320
+G +G + P ++N + + QVSCG H V LTR+ ++S+G G++GRLG
Sbjct: 474 YGCMGVDKVAGPEVLEPMQLNFFSNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGL 533
Query: 321 GRKVT--TGQPMEVP--INIPAPRNAGDGVDR-RWIAKLVACG 358
+ T Q ++VP + I A + DG K++ACG
Sbjct: 534 DSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACG 576
Score = 217 (81.4 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 61/197 (30%), Positives = 98/197 (49%)
Query: 137 RQVAAGGTHSVVLTREGHVWTW----------GQPWPPGDIKQISVPVRVQGLE--QVKL 184
RQV AG TH V+T E ++TW GQ GD P V+ L+ ++
Sbjct: 391 RQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQ-LGHGDKASYRQPKHVEKLQGKAIRQ 449
Query: 185 IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQ-PRS-QPIPVQGLSGLTLVDIAAGGW 242
++ G + + ++G L+A+G++ YG +G P +P+ + S + ++ G
Sbjct: 450 VSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFSNNPVEQVSCGDN 509
Query: 243 HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALT 302
H LT + EVY WG GE+GRLG D+++ PQKV++ IV V CG + LT
Sbjct: 510 HVVVLTRNKEVYSWGCGEYGRLGL-DSEEDY-YTPQKVDVPKALIIVAVQCGCDGTFLLT 567
Query: 303 RDGHIFSFGRGDHGRLG 319
+ G + + G + +LG
Sbjct: 568 QSGKVLACGLNEFNKLG 584
Score = 183 (69.5 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 83/325 (25%), Positives = 134/325 (41%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE----PERKDDTG-RI 119
P V L I Q + G + V D+G+ YA+G + YG G + PE +
Sbjct: 436 PKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNF 495
Query: 120 LRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPG-DIKQ-ISVPVRVQ 177
+ V C +V + +E + W G+ G D ++ P +V
Sbjct: 496 FSNNPVEQVSCGDNHVV---------VLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVD 546
Query: 178 GLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGD------TQPRSQPIP---- 225
+ + ++AV G L + G + A G NE+ +LG +P
Sbjct: 547 VPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTS 606
Query: 226 ---VQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNL 282
+ LS + +A G H+ A+ + G + +G + G+LG G N K +
Sbjct: 607 FTLAKQLSFYKIRTVAPGKTHTAAIDERGRLLTFGCNKCGQLGVG-NYKKRLGINLLGGP 665
Query: 283 LAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNA 342
L G+ +++VSCG ++A T D HIF++G G +GRL T +P I PR
Sbjct: 666 LGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAM---TPTERPHGSDICTSWPRPI 722
Query: 343 GDGVDRRWIAKLVACGGRHTLAIVE 367
+ + L +C G HT+ IVE
Sbjct: 723 FGSLHH--VPDL-SCRGWHTILIVE 744
Score = 48 (22.0 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 11 GSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK 58
G+ GQLG G+ V+ L+ +R V G ++ + D+G+
Sbjct: 418 GTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQ 465
>UNIPROTKB|F1MM88 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:DAAA02029619 IPI:IPI00714098 Ensembl:ENSBTAT00000022098
Uniprot:F1MM88
Length = 994
Score = 221 (82.9 bits), Expect = 4.3e-15, P = 4.3e-15
Identities = 63/223 (28%), Positives = 105/223 (47%)
Query: 146 SVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWG 205
+VV +R V+ WG G + V G + + G H + + L+ W
Sbjct: 357 AVVTSRTSEVYVWGG----GKSTPQKLDVIKSGCS-ARQVCAGNTHFAVVTVEKELYTWV 411
Query: 206 NNE-----YGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGE 260
N + +GQLG GD QP V+ L G + ++ G + +TD+G++Y +G
Sbjct: 412 NMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDY 471
Query: 261 HGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGY 320
+G +G + + P +++ + QVSCG H V LTR+ ++S+G G++GRLG
Sbjct: 472 YGCMGVDKVAGAEVLEPMQLDFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGL 531
Query: 321 GRKVT--TGQPMEVP--INIPAPRNAGDGVDR-RWIAKLVACG 358
+ T Q ++VP + I A + DG K++ACG
Sbjct: 532 DSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACG 574
Score = 210 (79.0 bits), Expect = 7.8e-14, P = 7.8e-14
Identities = 59/197 (29%), Positives = 96/197 (48%)
Query: 137 RQVAAGGTHSVVLTREGHVWTW----------GQPWPPGDIKQISVPVRVQGLE--QVKL 184
RQV AG TH V+T E ++TW GQ GD P V+ L+ ++
Sbjct: 389 RQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQ-LGHGDKASYRQPKHVEKLQGKAIRQ 447
Query: 185 IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS--QPIPVQGLSGLTLVDIAAGGW 242
++ G + + ++G L+A+G++ YG +G +P+ + + ++ G
Sbjct: 448 VSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEVLEPMQLDFFLSNPVEQVSCGDN 507
Query: 243 HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALT 302
H LT + EVY WG GE+GRLG D+++ PQKV++ IV V CG + LT
Sbjct: 508 HVVVLTRNKEVYSWGCGEYGRLGL-DSEEDY-YTPQKVDVPKALIIVAVQCGCDGTFLLT 565
Query: 303 RDGHIFSFGRGDHGRLG 319
+ G + + G + +LG
Sbjct: 566 QSGKVLACGLNEFNKLG 582
Score = 153 (58.9 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 64/234 (27%), Positives = 103/234 (44%)
Query: 151 REGHVWTWGQPWPPG-DIKQ-ISVPVRVQGLEQVKLIAV--GAFHNLALQEDGALWAWGN 206
+E + W G+ G D ++ P +V + + ++AV G L + G + A G
Sbjct: 516 KEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGL 575
Query: 207 NEYGQLGTGD------TQPRSQPIP-------VQGLSGLTLVDIAAGGWHSTALTDDGEV 253
NE+ +LG +P + LS + IA G H+ AL + G +
Sbjct: 576 NEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAALDERGRL 635
Query: 254 YGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRG 313
+G + G+LG G N K + L G+ +++VSCG ++A T D HIF++G G
Sbjct: 636 LTFGCNKCGQLGVG-NYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNG 694
Query: 314 DHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
+GRL T +P I PR + + L +C G +T+ IVE
Sbjct: 695 GNGRLAM---TPTERPHGSDICTSWPRPIFGSLHH--VPDL-SCRGWNTILIVE 742
Score = 128 (50.1 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 45/155 (29%), Positives = 71/155 (45%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P V L I Q + G + V D+G+ YA+G + YG G + + ++ D
Sbjct: 434 PKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEVLEPMQLDF 493
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG--QPWPPG-DIKQ-ISVPVRVQGLE 180
+ P V QV+ G H VVLTR V++WG + G D ++ P +V +
Sbjct: 494 FLSN---P---VEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPK 547
Query: 181 QVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLG 213
+ ++AV G L + G + A G NE+ +LG
Sbjct: 548 ALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLG 582
Score = 48 (22.0 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 11 GSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK 58
G+ GQLG G+ V+ L+ +R V G ++ + D+G+
Sbjct: 416 GTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQ 463
>MGI|MGI:2179432 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0021785
"branchiomotor neuron axon guidance" evidence=IMP] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0032880
"regulation of protein localization" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0048667 "cell morphogenesis
involved in neuron differentiation" evidence=IMP] [GO:0051493
"regulation of cytoskeleton organization" evidence=IMP]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:2179432
INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518 GO:GO:0005634
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0015630 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0030424 GO:GO:0008270
GO:GO:0032880 GO:GO:0006351 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 CleanEx:MM_PAM
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 KO:K10693
PANTHER:PTHR12846 CTD:23077 eggNOG:NOG240798 HOVERGEN:HBG053153
OrthoDB:EOG4VQ9NB ChiTaRS:MYCBP2 GO:GO:0021785 EMBL:AY325887
EMBL:BC059257 IPI:IPI00380409 IPI:IPI00608114 RefSeq:NP_997098.2
UniGene:Mm.6478 PDB:3GBW PDB:3HWJ PDBsum:3GBW PDBsum:3HWJ
ProteinModelPortal:Q7TPH6 SMR:Q7TPH6 IntAct:Q7TPH6 STRING:Q7TPH6
PhosphoSite:Q7TPH6 PaxDb:Q7TPH6 PRIDE:Q7TPH6 DNASU:105689
GeneID:105689 KEGG:mmu:105689 UCSC:uc007uwl.1 HOGENOM:HOG000112908
InParanoid:Q7TPH6 EvolutionaryTrace:Q7TPH6 NextBio:357830
CleanEx:MM_MYCBP2 Genevestigator:Q7TPH6
GermOnline:ENSMUSG00000033004 Uniprot:Q7TPH6
Length = 4711
Score = 161 (61.7 bits), Expect = 5.1e-15, Sum P(2) = 5.1e-15
Identities = 50/141 (35%), Positives = 71/141 (50%)
Query: 232 LTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQV 291
L V ++ G HS L ++G+VY +G G+HG+LG GD +S+ P V L G QV
Sbjct: 902 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGD--VNSRGCPTLVQALPGPS-TQV 958
Query: 292 SCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPI-NI-PAPR-NAGDGVDR 348
+ H+ L DG +F+FG G+LG R + +++P N PAP N G R
Sbjct: 959 TACSNHTAVLLMDGQVFTFGSFSKGQLG--RPI-----LDIPYWNAKPAPMPNIGSKYGR 1011
Query: 349 R--WIAKLVACGGRHTLAIVE 367
+ WI A G + L I E
Sbjct: 1012 KATWIG---ASGDQTFLRIDE 1029
Score = 132 (51.5 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 33/104 (31%), Positives = 55/104 (52%)
Query: 162 WPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS 221
+PPG ++ +R V+ ++ G H++ L E+G ++ +G ++GQLG GD R
Sbjct: 891 YPPGSVR-FDCELRA-----VQ-VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRG 943
Query: 222 QPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLG 265
P VQ L G + + A H+ L DG+V+ +G G+LG
Sbjct: 944 CPTLVQALPGPS-TQVTACSNHTAVLLMDGQVFTFGSFSKGQLG 986
Score = 124 (48.7 bits), Expect = 5.1e-15, Sum P(2) = 5.1e-15
Identities = 43/179 (24%), Positives = 80/179 (44%)
Query: 46 GSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIG--GWHCLAVDDQGRAYAWGGNEY 103
G SL I G + + + + + KIV ++G G H L V + G + G
Sbjct: 516 GKYQSLGIKQGGPSAGKWVELPIT--KSPKIVHFSVGHDGSHALLVAEDGSVFFTGSASK 573
Query: 104 GQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWP 163
G+ GE + + + + I+ + K++V G+ SV+ +++G ++ +G+
Sbjct: 574 GEDGESTKSRRQSKPYKPKKII---KMEGKIVVYTACNNGSSSVI-SKDGELYMFGKDAI 629
Query: 164 PGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ 222
D + ++ + QV A+G H L ++G +W +G N GQ G DT +Q
Sbjct: 630 YSDSSSLVSDLKGHFVTQV---AMGKAHTCVLMKNGEVWTFGVNNKGQCGR-DTGAMNQ 684
Score = 122 (48.0 bits), Expect = 9.9e-11, Sum P(2) = 9.9e-11
Identities = 33/97 (34%), Positives = 45/97 (46%)
Query: 243 HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALT 302
H L + + G G+ G D K + P V VQVSCG HSV L
Sbjct: 862 HPAQLKHKRDKHKDGSGDRGEK---DASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLM 918
Query: 303 RDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
+G +++FG G HG+LG+G + G P V +P P
Sbjct: 919 ENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA-LPGP 954
Score = 69 (29.3 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 32/130 (24%), Positives = 56/130 (43%)
Query: 1 MASTTSIIAWGS---GEDGQLGIGNNEEREWVC--VVKALEPYKVRSVVAGSRNSLAICD 55
+A S+ GS GEDG+ + + + ++K +E V + +S I
Sbjct: 559 VAEDGSVFFTGSASKGEDGESTKSRRQSKPYKPKKIIK-MEGKIVVYTACNNGSSSVISK 617
Query: 56 DGKTKT---ENIPSQVNAL-SNTK---IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 108
DG+ + I S ++L S+ K + Q A+G H + G + +G N GQCG
Sbjct: 618 DGELYMFGKDAIYSDSSSLVSDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGR 677
Query: 109 EPERKDDTGR 118
+ + G+
Sbjct: 678 DTGAMNQGGK 687
>UNIPROTKB|F1NAG9 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104074
OMA:GCDGTFL EMBL:AADN02003466 IPI:IPI00598995
Ensembl:ENSGALT00000016792 Uniprot:F1NAG9
Length = 984
Score = 220 (82.5 bits), Expect = 5.5e-15, P = 5.5e-15
Identities = 62/226 (27%), Positives = 107/226 (47%)
Query: 146 SVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEQ---VKLIAVGAFHNLALQEDGALW 202
+VV +R V+ WG G S P ++ ++ + + G H + + L+
Sbjct: 350 AVVTSRTSEVYVWGG----GK----STPQKLDAIKSGCSARQVCAGNTHFAVVTVEKELY 401
Query: 203 AWGNNE-----YGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWG 257
W N + +GQLG GD QP V+ L G + ++ G + +TD+G++Y +G
Sbjct: 402 TWVNMQGGTKLHGQLGHGDRASYRQPKHVEKLQGKAIRQVSCGDDFTVCITDEGQLYAFG 461
Query: 258 RGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGR 317
+G +G S + P +++ + QVSCG H LTR+ ++++G G++GR
Sbjct: 462 SDYYGCIGIDKAYGSEVLEPLQLDFFLTNPVEQVSCGDNHVAVLTRNREVYTWGCGEYGR 521
Query: 318 LGYGRKVT--TGQPMEVP--INIPAPRNAGDGVDR-RWIAKLVACG 358
LG + T Q ++VP +NI + DG K++ACG
Sbjct: 522 LGLDSEEDHYTPQKVDVPKTLNIVSVHCGCDGTFLLTQTGKVLACG 567
Score = 213 (80.0 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 66/206 (32%), Positives = 106/206 (51%)
Query: 137 RQVAAGGTHSVVLTREGHVWTW----------GQPWPPGDIKQISVPVRVQGLE--QVKL 184
RQV AG TH V+T E ++TW GQ GD P V+ L+ ++
Sbjct: 382 RQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQ-LGHGDRASYRQPKHVEKLQGKAIRQ 440
Query: 185 IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPI-PVQGLSGLT--LVDIAAGG 241
++ G + + ++G L+A+G++ YG +G D S+ + P+Q LT + ++ G
Sbjct: 441 VSCGDDFTVCITDEGQLYAFGSDYYGCIGI-DKAYGSEVLEPLQLDFFLTNPVEQVSCGD 499
Query: 242 WHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVAL 301
H LT + EVY WG GE+GRLG D+++ PQKV++ +IV V CG + L
Sbjct: 500 NHVAVLTRNREVYTWGCGEYGRLGL-DSEEDH-YTPQKVDVPKTLNIVSVHCGCDGTFLL 557
Query: 302 TRDGHIFSFGRGDHGRLGYGRKVTTG 327
T+ G + + G + +LG + T+G
Sbjct: 558 TQTGKVLACGLNEFNKLGLNQ-CTSG 582
Score = 191 (72.3 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 84/324 (25%), Positives = 141/324 (43%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P V L I Q + G + + D+G+ YA+G + YG G + + L+ D
Sbjct: 427 PKHVEKLQGKAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEPLQLDF 486
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPG-DIKQIS-VPVRVQGLEQV 182
+ P V + RE + W G+ G D ++ P +V + +
Sbjct: 487 FLTN---PVEQV-SCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHYTPQKVDVPKTL 542
Query: 183 KLIAV--GAFHNLALQEDGALWAWGNNEYGQLG-----TG----DTQ---PRSQPIPV-Q 227
+++V G L + G + A G NE+ +LG +G DT P + + + +
Sbjct: 543 NIVSVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAK 602
Query: 228 GLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAG-- 285
LS + I+ G H+ ++ + G + +G + G+LG GD K +NLLAG
Sbjct: 603 QLSFYKIRTISPGKTHTASIDERGRLLTFGSNKCGQLGVGDYKKHLG-----INLLAGPL 657
Query: 286 --EDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAG 343
+ +++VSCG ++A T D HIF++G G +GRL T + I PR
Sbjct: 658 GGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAM---TPTERAHGSDICTSWPRPIF 714
Query: 344 DGVDRRWIAKLVACGGRHTLAIVE 367
+ + L +C G HT+ +VE
Sbjct: 715 GSLHH--VPDL-SCRGWHTIIVVE 735
Score = 49 (22.3 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 14/48 (29%), Positives = 23/48 (47%)
Query: 11 GSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK 58
G+ GQLG G+ V+ L+ +R V G ++ I D+G+
Sbjct: 409 GTKLHGQLGHGDRASYRQPKHVEKLQGKAIRQVSCGDDFTVCITDEGQ 456
>RGD|1309901 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA;ISO] RGD:1309901 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 CTD:91433
OrthoDB:EOG41NTMF GeneTree:ENSGT00700000104312 IPI:IPI00391295
RefSeq:XP_218819.5 UniGene:Rn.225183 Ensembl:ENSRNOT00000029471
GeneID:308760 KEGG:rno:308760 UCSC:RGD:1309901 NextBio:659480
Uniprot:D3ZG92
Length = 378
Score = 209 (78.6 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 62/214 (28%), Positives = 105/214 (49%)
Query: 128 QRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGLEQVK 183
Q AP+L VRQ+ G H+++L G V++WG G ++ P ++ L+ ++
Sbjct: 155 QPLAPELRVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGSLEAELEPRLLEALQGLR 214
Query: 184 L--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGG 241
+ +A G +H++ + E G ++ WG NE GQL +P + SG +
Sbjct: 215 MAEVAAGGWHSVCVSETGDIYIWGWNESGQLA----------LPTR--SGTEKKTVRE-- 260
Query: 242 WHSTALTDDGEVYGWGRGEHGRL---GFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHS 298
+T L DDG RGE L G + + + P ++L G D V+ SCG H+
Sbjct: 261 -EATELNDDGL-----RGEEAALADVGAPAHFIAIQPFPALLDLPLGSDAVKASCGSRHT 314
Query: 299 VALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
+TR G ++++G G +G+LG+ ++ QP V
Sbjct: 315 AVVTRTGELYTWGWGKYGQLGHKDSTSSDQPCRV 348
Score = 145 (56.1 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 52/177 (29%), Positives = 83/177 (46%)
Query: 134 LIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNL 193
L + +VAAGG HSV ++ G ++ WG W + Q+++P R G E+ K + A
Sbjct: 213 LRMAEVAAGGWHSVCVSETGDIYIWG--W--NESGQLALPTR-SGTEK-KTVREEATE-- 264
Query: 194 ALQEDGALWAWGNNEYGQLGTGDTQPRSQPIP-VQGLS-GLTLVDIAAGGWHSTALTDDG 251
L +DG +G QP P + L G V + G H+ +T G
Sbjct: 265 -LNDDGLRGE--EAALADVGAPAHFIAIQPFPALLDLPLGSDAVKASCGSRHTAVVTRTG 321
Query: 252 EVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGE--DIVQVSCG--GTHSVALTRD 304
E+Y WG G++G+LG D+ S + P +V ++ V+CG T+ A+ R+
Sbjct: 322 ELYTWGWGKYGQLGHKDSTSSDQ--PCRVEYFVERQLEVRAVTCGPWNTYVYAVERE 376
Score = 142 (55.0 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 32/98 (32%), Positives = 55/98 (56%)
Query: 222 QPIPVQGLSG-LTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV 280
QP Q L+ L + + G H+ L + G+V+ WG G HG+LG G + +++ P+ +
Sbjct: 150 QPPFCQPLAPELRVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGSLE--AELEPRLL 207
Query: 281 NLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRL 318
L G + +V+ GG HSV ++ G I+ +G + G+L
Sbjct: 208 EALQGLRMAEVAAGGWHSVCVSETGDIYIWGWNESGQL 245
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 31/107 (28%), Positives = 53/107 (49%)
Query: 75 KIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKL 134
++ Q +G H L + + G+ ++WGG +GQ G + R+L L
Sbjct: 162 RVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGSLEAELEPRLLE--------ALQGL 213
Query: 135 IVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEQ 181
+ +VAAGG HSV ++ G ++ WG W + Q+++P R G E+
Sbjct: 214 RMAEVAAGGWHSVCVSETGDIYIWG--W--NESGQLALPTR-SGTEK 255
Score = 79 (32.9 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 16/51 (31%), Positives = 29/51 (56%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDG 57
+ +WG G GQLG G+ E +++AL+ ++ V AG +S+ + + G
Sbjct: 182 VFSWGGGRHGQLGHGSLEAELEPRLLEALQGLRMAEVAAGGWHSVCVSETG 232
Score = 39 (18.8 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 17/62 (27%), Positives = 27/62 (43%)
Query: 94 RAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREG 153
R AW G +G CG G+ + P+ V QV+A +++ ++TR G
Sbjct: 5 RQGAWFG--FGFCGFGQALGSGNGQ---HAVHSPEPLHAADDVCQVSASWSYTALVTRGG 59
Query: 154 HV 155
V
Sbjct: 60 RV 61
>UNIPROTKB|C9J3R0 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341
IPI:IPI00926548 ProteinModelPortal:C9J3R0 SMR:C9J3R0 STRING:C9J3R0
PRIDE:C9J3R0 Ensembl:ENST00000434290 ArrayExpress:C9J3R0
Bgee:C9J3R0 Uniprot:C9J3R0
Length = 273
Score = 197 (74.4 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 52/141 (36%), Positives = 73/141 (51%)
Query: 191 HNLALQEDGALWAWGNNEYGQLGTGDT-QPRSQPIPVQGLSGLTLVDIAAGGWHSTALTD 249
H E G + G + GQLG G+ R +P V + V AGG H+ L+
Sbjct: 35 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV--VQAEAGGMHTVCLSK 92
Query: 250 DGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFS 309
G+VY +G + G LG + + S+MVP KV L E +VQVS G +H+ ALT DG +F
Sbjct: 93 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQ--EKVVQVSAGDSHTAALTDDGRVFL 150
Query: 310 FGRGDH------GRLGYGRKV 324
+G H RLG+G++V
Sbjct: 151 WGSFRHCLFHTSQRLGWGKEV 171
Score = 145 (56.1 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 36/91 (39%), Positives = 50/91 (54%)
Query: 243 HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALT 302
H + T+ G V G+G+ G+LG G+N K P V++ ED+VQ GG H+V L+
Sbjct: 35 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKK-PALVSI--PEDVVQAEAGGMHTVCLS 91
Query: 303 RDGHIFSFGRGDHGRLGYGRKVTTGQPMEVP 333
+ G ++SFG D G LG V G M VP
Sbjct: 92 KSGQVYSFGCNDEGALGRDTSVE-GSEM-VP 120
Score = 142 (55.0 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 52/175 (29%), Positives = 82/175 (46%)
Query: 108 EEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI 167
E +RK RI +R P PK +V+ +HS T G V T GQ GD+
Sbjct: 3 EAEDRKMSPKRIAKRRSP-PADAIPKSKKVKVSHR-SHS---TEPGLVLTLGQ----GDV 53
Query: 168 KQISVPVRVQGLEQVKLIAV---------GAFHNLALQEDGALWAWGNNEYGQLGTGDTQ 218
Q+ + V ++ L+++ G H + L + G ++++G N+ G LG +
Sbjct: 54 GQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSV 113
Query: 219 PRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEH------GRLGFG 267
S+ +P + +V ++AG H+ ALTDDG V+ WG H RLG+G
Sbjct: 114 EGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRHCLFHTSQRLGWG 168
Score = 112 (44.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 27/84 (32%), Positives = 44/84 (52%)
Query: 76 IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLI 135
+VQA GG H + + G+ Y++G N+ G G DT + ++P + +
Sbjct: 77 VVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGR------DTS--VEGSEMVPGKVELQEK 128
Query: 136 VRQVAAGGTHSVVLTREGHVWTWG 159
V QV+AG +H+ LT +G V+ WG
Sbjct: 129 VVQVSAGDSHTAALTDDGRVFLWG 152
Score = 91 (37.1 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 33/112 (29%), Positives = 51/112 (45%)
Query: 7 IIAWGSGEDGQLGIGNNE-EREWVCVVKALEPYKVRSVVAGSRNSLAI----------CD 55
++ G G+ GQLG+G N ER+ +V P V AG +++ + C+
Sbjct: 45 VLTLGQGDVGQLGLGENVMERKKPALVSI--PEDVVQAEAGGMHTVCLSKSGQVYSFGCN 102
Query: 56 D----GK-TKTEN---IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWG 99
D G+ T E +P +V K+VQ + G H A+ D GR + WG
Sbjct: 103 DEGALGRDTSVEGSEMVPGKVEL--QEKVVQVSAGDSHTAALTDDGRVFLWG 152
Score = 73 (30.8 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 167 IKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLG 213
+K+ VPV+VQ V +A G H + L DG L+ G E GQLG
Sbjct: 195 MKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 241
>UNIPROTKB|E1B8U7 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:DAAA02052163
IPI:IPI00710464 UniGene:Bt.111664 Ensembl:ENSBTAT00000024803
NextBio:20875558 Uniprot:E1B8U7
Length = 377
Score = 208 (78.3 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 63/211 (29%), Positives = 104/211 (49%)
Query: 131 APKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGLEQVKL-- 184
AP L R++ G H+++L G V++WG G ++ P ++ L+ +++
Sbjct: 156 APTLRARRLELGAEHALLLDAAGQVFSWGAGRHGQLGHGTLEAEPEPRLLEALQGLRMAE 215
Query: 185 IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLS--GLTLVDIAAGGW 242
+A G +H++ L E G ++ WG NE GQL +P + L+ G T A+G
Sbjct: 216 VAAGGWHSVCLSETGDIYIWGWNESGQLA----------LPTKSLAEDGKTTAGEASG-- 263
Query: 243 HSTALTDDG-EVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVAL 301
L +DG EV RG G G + + P ++L G + V+VSCG H+ L
Sbjct: 264 ----LEEDGSEVK---RGSAGEDGAPAPFIAVQPFPALLDLSPGSEAVKVSCGSRHTAVL 316
Query: 302 TRDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
TR G ++++G G +G+LG+ T +P V
Sbjct: 317 TRTGELYTWGWGKYGQLGHKDTTTLDRPCRV 347
Score = 181 (68.8 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 64/228 (28%), Positives = 101/228 (44%)
Query: 81 IGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVA 140
+G H L +D G+ ++WG +GQ G + R+L L + +VA
Sbjct: 166 LGAEHALLLDAAGQVFSWGAGRHGQLGHGTLEAEPEPRLLE--------ALQGLRMAEVA 217
Query: 141 AGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGA 200
AGG HSV L+ G ++ WG W + Q+++P + E K A A L+EDG+
Sbjct: 218 AGGWHSVCLSETGDIYIWG--W--NESGQLALPTKSLA-EDGKTTAGEAS---GLEEDGS 269
Query: 201 LWAWGN-NEYGQLGTG-DTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGR 258
G+ E G QP P + G V ++ G H+ LT GE+Y WG
Sbjct: 270 EVKRGSAGEDGAPAPFIAVQPF--PALLDLSPGSEAVKVSCGSRHTAVLTRTGELYTWGW 327
Query: 259 GEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCG--GTHSVALTRD 304
G++G+LG D + + + + VSCG T+ A+ ++
Sbjct: 328 GKYGQLGHKDTTTLDRPCRVEYFVDKQLQVRTVSCGPWNTYVYAVEKE 375
Score = 151 (58.2 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 50/190 (26%), Positives = 84/190 (44%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDT 116
G + E P + AL ++ + A GGWH + + + G Y WG NE GQ + +
Sbjct: 194 GTLEAEPEPRLLEALQGLRMAEVAAGGWHSVCLSETGDIYIWGWNESGQLALPTKSLAED 253
Query: 117 GRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRV 176
G+ + + + V++ +AG + + QP+P + +S P
Sbjct: 254 GKTTAGEASGLEEDGSE--VKRGSAGEDGAPA------PFIAVQPFPA--LLDLS-P--- 299
Query: 177 QGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGL--SGLTL 234
G E VK ++ G+ H L G L+ WG +YGQLG DT +P V+ L +
Sbjct: 300 -GSEAVK-VSCGSRHTAVLTRTGELYTWGWGKYGQLGHKDTTTLDRPCRVEYFVDKQLQV 357
Query: 235 VDIAAGGWHS 244
++ G W++
Sbjct: 358 RTVSCGPWNT 367
>DICTYBASE|DDB_G0284187 [details] [associations]
symbol:Dd5P2 "inositol 5-phosphatase" species:44689
"Dictyostelium discoideum" [GO:0046856 "phosphatidylinositol
dephosphorylation" evidence=IDA] [GO:0046855 "inositol phosphate
dephosphorylation" evidence=IDA] [GO:0034485
"phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0004445 "inositol-polyphosphate 5-phosphatase
activity" evidence=IDA] [GO:0004439
"phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0046854 "phosphatidylinositol phosphorylation"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000300 SMART:SM00128 dictyBase:DDB_G0284187
INTERPRO:IPR000408 Pfam:PF00415 GenomeReviews:CM000153_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR005135
SUPFAM:SSF56219 EMBL:AAFI02000064 GO:GO:0046854 GO:GO:0046855
GO:GO:0004439 GO:GO:0046856 GO:GO:0004445 eggNOG:COG5411
GO:GO:0034485 RefSeq:XP_638694.1 ProteinModelPortal:Q54PV1
EnsemblProtists:DDB0191414 GeneID:8624525 KEGG:ddi:DDB_G0284187
InParanoid:Q54PV1 OMA:SHEKMER Uniprot:Q54PV1
Length = 1800
Score = 203 (76.5 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 74/286 (25%), Positives = 130/286 (45%)
Query: 64 IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE-EPERKDDT---GRI 119
+P V+ LS +++ G A+ + G Y WG + YGQ G + K + I
Sbjct: 116 VPLPVDTLSKFNVIKIKAGNNVSAAITEAGDLYCWGSSAYGQLGNGKMNAKLHSFTPTTI 175
Query: 120 LRRDIVIPQRCAP---KLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRV 176
L I ++ P L + G H++ ++ G +++WG Q+ +
Sbjct: 176 LNPLIPDAEKDDPIYQNLQYTNICFGAQHTIAISTTGAIFSWGS----NQYGQLGL---- 227
Query: 177 QGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVD 236
G KL+ V H L A N G++ T D ++ + + +VD
Sbjct: 228 -GHCNAKLVPV-PIH---LDNSFERRAGHINSLGEIVTTDFTAKT----IHRI----VVD 274
Query: 237 IAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDN-DKSSKMVPQKVN-LLAGEDIVQVSCG 294
IA G +HS LT +G+++ WG ++G+LG GD+ D+S VP+ V L I +++ G
Sbjct: 275 IACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQS---VPKTVKGSLEFVKINRMALG 331
Query: 295 GTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPR 340
H++ LT++ +F+FG + +LG+G + + P I P+
Sbjct: 332 NNHTILLTKEQDVFTFGSNEFYQLGHG-SIGGKNRLYFPTQIQKPK 376
Score = 200 (75.5 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 62/219 (28%), Positives = 104/219 (47%)
Query: 138 QVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQE 197
Q++ G HS + WG+ G ++ + ++ +V ++ G H L L
Sbjct: 37 QLSMGPNHSAAIVNN-ECLMWGEVM--G--RKHTTLFKIVWKRRVVSVSCGFNHTLLLTS 91
Query: 198 DGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWG 257
+ +++ G N+ GQLG + + P+PV LS ++ I AG S A+T+ G++Y WG
Sbjct: 92 EYKIFSMGFNQTGQLGIENVVDSAVPLPVDTLSKFNVIKIKAGNNVSAAITEAGDLYCWG 151
Query: 258 RGEHGRLGFGD-NDKSSKMVPQKV-NLL---AGED--IVQ------VSCGGTHSVALTRD 304
+G+LG G N K P + N L A +D I Q + G H++A++
Sbjct: 152 SSAYGQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQNLQYTNICFGAQHTIAISTT 211
Query: 305 GHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAG 343
G IFS+G +G+LG G P+ + ++ R AG
Sbjct: 212 GAIFSWGSNQYGQLGLGHCNAKLVPVPIHLDNSFERRAG 250
Score = 158 (60.7 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 40/114 (35%), Positives = 61/114 (53%)
Query: 185 IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQG-LSGLTLVDIAAGGWH 243
IA G FH+ L +G L+ WG+N+YGQLG GD+ +S P V+G L + + +A G H
Sbjct: 275 IACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQSVPKTVKGSLEFVKINRMALGNNH 334
Query: 244 STALTDDGEVYGWGRGEHGRLGFGD-NDKSSKMVP---QKVNLLAGEDIVQVSC 293
+ LT + +V+ +G E +LG G K+ P QK ++A + C
Sbjct: 335 TILLTKEQDVFTFGSNEFYQLGHGSIGGKNRLYFPTQIQKPKVMASDIFAAGDC 388
Score = 144 (55.7 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 54/247 (21%), Positives = 100/247 (40%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDD-----GKTKT 61
+ WG G+ G +N ++++ L + + G +S AI ++ G+
Sbjct: 4 LYTWGKGKTGNTC--HNIDKKYPSPPSVLISLNLDQLSMGPNHSAAIVNNECLMWGEVMG 61
Query: 62 ENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILR 121
+ + ++V + G H L + + + ++ G N+ GQ G E ++
Sbjct: 62 RKHTTLFKIVWKRRVVSVSCGFNHTLLLTSEYKIFSMGFNQTGQLGIE--------NVVD 113
Query: 122 RDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP----------------WPPG 165
+ +P K V ++ AG S +T G ++ WG + P
Sbjct: 114 SAVPLPVDTLSKFNVIKIKAGNNVSAAITEAGDLYCWGSSAYGQLGNGKMNAKLHSFTPT 173
Query: 166 DIKQISVPVR------VQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQP 219
I +P Q L+ I GA H +A+ GA+++WG+N+YGQLG G
Sbjct: 174 TILNPLIPDAEKDDPIYQNLQYTN-ICFGAQHTIAISTTGAIFSWGSNQYGQLGLGHCNA 232
Query: 220 RSQPIPV 226
+ P+P+
Sbjct: 233 KLVPVPI 239
Score = 63 (27.2 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 18/57 (31%), Positives = 26/57 (45%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDG 57
+ S I + G + GQLGI N + V L + V + AG+ S AI + G
Sbjct: 89 LTSEYKIFSMGFNQTGQLGIENVVDSAVPLPVDTLSKFNVIKIKAGNNVSAAITEAG 145
>FB|FBgn0031769 [details] [associations]
symbol:CG9135 species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005875 "microtubule associated complex" evidence=IDA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005875 EMBL:AE014134
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104160 OMA:FGENKLG EMBL:AY058682
EMBL:AM294309 EMBL:AM294310 EMBL:AM294311 EMBL:AM294312
EMBL:AM294313 EMBL:AM294314 EMBL:AM294315 EMBL:AM294316
EMBL:AM294317 EMBL:AM294318 EMBL:FM245376 EMBL:FM245377
EMBL:FM245378 EMBL:FM245379 EMBL:FM245380 EMBL:FM245381
EMBL:FM245382 EMBL:FM245383 EMBL:FM245384 EMBL:FM245385
EMBL:FM245386 EMBL:FM245387 RefSeq:NP_608985.1 RefSeq:NP_723150.1
UniGene:Dm.4234 HSSP:P18754 SMR:Q9VMI5 IntAct:Q9VMI5
MINT:MINT-744911 STRING:Q9VMI5 EnsemblMetazoa:FBtr0079185
EnsemblMetazoa:FBtr0079186 GeneID:33850 KEGG:dme:Dmel_CG9135
UCSC:CG9135-RA FlyBase:FBgn0031769 InParanoid:Q9VMI5
OrthoDB:EOG4QV9T7 ChiTaRS:CG9135 GenomeRNAi:33850 NextBio:785598
Uniprot:Q9VMI5
Length = 487
Score = 188 (71.2 bits), Expect = 7.3e-12, P = 7.3e-12
Identities = 60/202 (29%), Positives = 91/202 (45%)
Query: 180 EQVKLIAVG--AFHNLALQEDGALWAWGNNEYGQLGTG-DTQPRSQPIPVQGLSGLTLVD 236
E+ + +A G A H + + D +G N GQLG D + +P + L L +V
Sbjct: 114 EKYRYVASGPSAAHTILINMDRKALGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQ 173
Query: 237 IAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGT 296
A G H+ LTD G VY G + G+ G G N ++ P +N G I+++ CG
Sbjct: 174 AAVGRHHTLFLTDTGTVYACGENKSGQCGVG-NTHANIYSPTPINY-RGPPIIRIGCGAE 231
Query: 297 HSVALTRDGHIFSFGRGDHGRLGYG---------RKVT---TGQPMEVPINIPAPRNAG- 343
SV L G + +FG ++G+LG+ K++ P +V + I +
Sbjct: 232 FSVILDIKGSLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHV 291
Query: 344 DGVDRRWIAKLVACGGRHTLAI 365
VD I ACG HT+AI
Sbjct: 292 TPVDGVQIVDF-ACGNNHTVAI 312
Score = 160 (61.4 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 51/185 (27%), Positives = 82/185 (44%)
Query: 68 VNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIP 127
V + +IV A G H +A+D + R Y+WG +G+ G E KD+ L +
Sbjct: 291 VTPVDGVQIVDFACGNNHTVAIDSKKRVYSWGFGGFGRLGHA-EPKDEMVPRLMKFFDTQ 349
Query: 128 QRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEQVKLIAV 187
R R V G T S+++ G ++ +GQ G+ PV Q L + +
Sbjct: 350 GRGG-----RSVFCGSTFSLIVNELGLLFLFGQNKKTGEANMYPKPV--QDLSGWNITDI 402
Query: 188 GAFH-NLALQEDGALWAWGNNE-YGQLGTGDTQPRSQ-PIPVQGLSGLTLVDIAAGGWHS 244
G + ++ + D L AWG + +G+LG G+ Q S P V L + + + G H+
Sbjct: 403 GCANTSIMISADDTLIAWGASPTFGELGIGEFQKSSTVPKEVPKLDNIKIPQVTMGYSHT 462
Query: 245 TALTD 249
L D
Sbjct: 463 VLLVD 467
Score = 150 (57.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 44/146 (30%), Positives = 70/146 (47%)
Query: 137 RQVAAG--GTHSVVLTREGHVWTWGQPWPPG------DIKQISVPVRVQGLEQVKLI--A 186
R VA+G H++++ + +G+ P G DIK P + LEQ+ ++ A
Sbjct: 117 RYVASGPSAAHTILINMDRKALGFGRN-PSGQLGLSQDIKLAEKPTIIPALEQLNIVQAA 175
Query: 187 VGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS-QPIPVQGLSGLTLVDIAAGGWHST 245
VG H L L + G ++A G N+ GQ G G+T P P+ G ++ I G S
Sbjct: 176 VGRHHTLFLTDTGTVYACGENKSGQCGVGNTHANIYSPTPIN-YRGPPIIRIGCGAEFSV 234
Query: 246 ALTDDGEVYGWGRGEHGRLGFGDNDK 271
L G ++ +G E+G+LG + K
Sbjct: 235 ILDIKGSLHTFGLPEYGQLGHNTDAK 260
Score = 139 (54.0 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 51/176 (28%), Positives = 79/176 (44%)
Query: 140 AAGGTHSVVLTREGHVWTWG----QPWPPGDIKQISVPVRVQGLEQV----KLIAVGAFH 191
A G H+V + + V++WG + K VP ++ + + + G+
Sbjct: 303 ACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQGRGGRSVFCGSTF 362
Query: 192 NLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDG 251
+L + E G L+ +G N+ TG+ P PVQ LSG + DI S ++ D
Sbjct: 363 SLIVNELGLLFLFGQNKK----TGEAN--MYPKPVQDLSGWNITDIGCANT-SIMISADD 415
Query: 252 EVYGWGRGE-HGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGH 306
+ WG G LG G+ KSS VP++V L I QV+ G +H+V L H
Sbjct: 416 TLIAWGASPTFGELGIGEFQKSST-VPKEVPKLDNIKIPQVTMGYSHTVLLVDTTH 470
Score = 123 (48.4 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 47/172 (27%), Positives = 78/172 (45%)
Query: 176 VQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLV 235
V G++ V A G H +A+ +++WG +G+LG +P+ + +P +
Sbjct: 294 VDGVQIVDF-ACGNNHTVAIDSKKRVYSWGFGGFGRLG--HAEPKDEMVPRL----MKFF 346
Query: 236 DIAAGGWHSTALTDDGEVYGWGRGEHGRLG-FGDNDKSSK--MVPQKVNLLAGEDIVQVS 292
D G S G + E G L FG N K+ + M P+ V L+G +I +
Sbjct: 347 DTQGRGGRSVFC---GSTFSLIVNELGLLFLFGQNKKTGEANMYPKPVQDLSGWNITDIG 403
Query: 293 CGGTHSVALTRDGHIFSFGRGD-HGRLGYGR-KVTTGQPMEVPI--NIPAPR 340
C T S+ ++ D + ++G G LG G + ++ P EVP NI P+
Sbjct: 404 CANT-SIMISADDTLIAWGASPTFGELGIGEFQKSSTVPKEVPKLDNIKIPQ 454
Score = 122 (48.0 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 30/89 (33%), Positives = 43/89 (48%)
Query: 226 VQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLL-- 283
V + G+ +VD A G H+ A+ VY WG G GRLG + +MVP+ +
Sbjct: 291 VTPVDGVQIVDFACGNNHTVAIDSKKRVYSWGFGGFGRLGHAE--PKDEMVPRLMKFFDT 348
Query: 284 AGEDIVQVSCGGTHSVALTRDGHIFSFGR 312
G V CG T S+ + G +F FG+
Sbjct: 349 QGRGGRSVFCGSTFSLIVNELGLLFLFGQ 377
Score = 118 (46.6 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 35/97 (36%), Positives = 48/97 (49%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P+ + AL IVQAA+G H L + D G YA G N+ GQCG +T +
Sbjct: 160 PTIIPALEQLNIVQAAVGRHHTLFLTDTGTVYACGENKSGQCGV-----GNTHANIYSPT 214
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP 161
I R P I+R + G SV+L +G + T+G P
Sbjct: 215 PINYRGPP--IIR-IGCGAEFSVILDIKGSLHTFGLP 248
Score = 66 (28.3 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 21/74 (28%), Positives = 32/74 (43%)
Query: 42 SVVAGSRNSLAICDDGKTKTENI--PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWG 99
+V A N C G T NI P+ +N I++ G + +D +G + +G
Sbjct: 189 TVYACGENKSGQCGVGNTHA-NIYSPTPIN-YRGPPIIRIGCGAEFSVILDIKGSLHTFG 246
Query: 100 GNEYGQCGEEPERK 113
EYGQ G + K
Sbjct: 247 LPEYGQLGHNTDAK 260
Score = 48 (22.0 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 1 MASTTSIIAWGSGEDGQLGIGN 22
+ T ++ A G + GQ G+GN
Sbjct: 184 LTDTGTVYACGENKSGQCGVGN 205
>DICTYBASE|DDB_G0282381 [details] [associations]
symbol:gefC "Ras nucleotide exchange factor"
species:44689 "Dictyostelium discoideum" [GO:0051056 "regulation of
small GTPase mediated signal transduction" evidence=IEA]
[GO:0035023 "regulation of Rho protein signal transduction"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] InterPro:IPR000219
InterPro:IPR000651 InterPro:IPR001895 InterPro:IPR008937
InterPro:IPR019804 Pfam:PF00617 Pfam:PF00618 Pfam:PF00621
PROSITE:PS00720 PROSITE:PS00741 PROSITE:PS50009 PROSITE:PS50010
PROSITE:PS50212 SMART:SM00147 SMART:SM00229 dictyBase:DDB_G0282381
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007264 EMBL:AAFI02000047
GenomeReviews:CM000152_GR GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
Gene3D:1.10.840.10 InterPro:IPR023578 SUPFAM:SSF48366
PANTHER:PTHR23113 HSSP:Q07889 EMBL:AY160092 RefSeq:XP_640241.1
ProteinModelPortal:Q8IS20 STRING:Q8IS20 EnsemblProtists:DDB0215004
GeneID:8623780 KEGG:ddi:DDB_G0282381 InParanoid:Q8IS20 OMA:SIATIRG
Uniprot:Q8IS20
Length = 1457
Score = 187 (70.9 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 81/317 (25%), Positives = 137/317 (43%)
Query: 6 SIIAWGSGEDGQLG--IGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKTEN 63
++ WGS +GQLG + ++++ + L+ + S + S +S + +T
Sbjct: 353 NVWTWGSNSNGQLGYLVDTQQQQQ-----QQLQQQQSMSSLQPSASSSSP-SSSSLQTTC 406
Query: 64 IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG--EEPERKDDTGRILR 121
P V + K + A G + A+ + G Y WG NE+G+ G + +R+ T R++R
Sbjct: 407 TPKMVE-IKCVKYI--ATGVKNTAALTEWGELYMWGINEHGELGLGDTIDRRTPT-RVIR 462
Query: 122 RDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGL-- 179
+V +A THS T G ++ WGQ G I+ I P+ +
Sbjct: 463 ---------LKNEVVSTIACSSTHSACYTESGKMYVWGQSDETGKIQAIPSPLPIHSYLD 513
Query: 180 EQVKLI---AVGAFHN----LALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQG-LSG 231
++K VG F + G + G++ + P PIP++ L
Sbjct: 514 REIKSPNGGGVGGFFGGGGKIKQLACGQRCIAVLTQMGEVFMWEI-P-GIPIPLRNALEN 571
Query: 232 LTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV----NLLAGED 287
++ +I G +H LTD GEV GR + G+LG D + +V Q L + E
Sbjct: 572 HSVRNIVMGNFHLVCLTDSGEVVTIGRNKTGQLGRTDAENEPGIVKQLSFDPDGLNSDEF 631
Query: 288 IVQVSCGGTHSVALTRD 304
+V ++ G HSVAL +
Sbjct: 632 VVSIAAGEFHSVALVEN 648
Score = 157 (60.3 bits), Expect = 2.2e-12, Sum P(3) = 2.2e-12
Identities = 48/158 (30%), Positives = 70/158 (44%)
Query: 163 PPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ 222
P Q + ++ ++ VK IA G + AL E G L+ WG NE+G+LG GDT R
Sbjct: 397 PSSSSLQTTCTPKMVEIKCVKYIATGVKNTAALTEWGELYMWGINEHGELGLGDTIDRRT 456
Query: 223 PIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRG-EHGRL----------GFGDNDK 271
P V L + IA HS T+ G++Y WG+ E G++ + D +
Sbjct: 457 PTRVIRLKNEVVSTIACSSTHSACYTESGKMYVWGQSDETGKIQAIPSPLPIHSYLDREI 516
Query: 272 SSKMVPQKVNLLAGED-IVQVSCGGTHSVALTRDGHIF 308
S G I Q++CG LT+ G +F
Sbjct: 517 KSPNGGGVGGFFGGGGKIKQLACGQRCIAVLTQMGEVF 554
Score = 152 (58.6 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 41/128 (32%), Positives = 62/128 (48%)
Query: 237 IAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGT 296
IA G ++ ALT+ GE+Y WG EHG LG GD + P +V L E + ++C T
Sbjct: 419 IATGVKNTAALTEWGELYMWGINEHGELGLGDT--IDRRTPTRVIRLKNEVVSTIACSST 476
Query: 297 HSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPIN--IPAPRNAGDG--VDRRWIA 352
HS T G ++ +G+ D G + + + P+ ++ I +P G G
Sbjct: 477 HSACYTESGKMYVWGQSDE--TGKIQAIPSPLPIHSYLDREIKSPNGGGVGGFFGGGGKI 534
Query: 353 KLVACGGR 360
K +ACG R
Sbjct: 535 KQLACGQR 542
Score = 103 (41.3 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 179 LEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLG-TGDTQPRSQ 222
L +K +A+G +H + L E G +W WG+N GQLG DTQ + Q
Sbjct: 332 LNTIKQVALGNYHIVLLTEGGNVWTWGSNSNGQLGYLVDTQQQQQ 376
Score = 85 (35.0 bits), Expect = 2.2e-12, Sum P(3) = 2.2e-12
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 131 APKLIVRQVAAGGTHSVVLTREGHVWTWG 159
+P ++QVA G H V+LT G+VWTWG
Sbjct: 330 SPLNTIKQVALGNYHIVLLTEGGNVWTWG 358
Score = 77 (32.2 bits), Expect = 5.2e-11, Sum P(3) = 5.2e-11
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 69 NALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 107
N+ NT I Q A+G +H + + + G + WG N GQ G
Sbjct: 329 NSPLNT-IKQVALGNYHIVLLTEGGNVWTWGSNSNGQLG 366
Score = 76 (31.8 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 28/99 (28%), Positives = 44/99 (44%)
Query: 276 VPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPIN 335
+P + N L + + G H V LT G + + GR G+LG R +P V
Sbjct: 563 IPLR-NALENHSVRNIVMGNFHLVCLTDSGEVVTIGRNKTGQLG--RTDAENEPGIVKQL 619
Query: 336 IPAPRNAGDGVDRRWIAKLVACGGRHTLAIVEWQTEESK 374
P DG++ +A G H++A+VE T ++K
Sbjct: 620 SFDP----DGLNSDEFVVSIAAGEFHSVALVE-NTPKTK 653
Score = 50 (22.7 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 15/57 (26%), Positives = 26/57 (45%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPY------KVRSVVAGSRNSLAICDD 56
S+ +G G +G LG+G + C Y +V+ V GS +++ + DD
Sbjct: 2 SVFTFGHGSNGALGLGKITDD--TCPTPQKVNYFTEIDKRVKKVACGSYHTVFVTDD 56
Score = 49 (22.3 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 136 VRQVAAGGTHSVVLTREGHVWTWG 159
V++VA G H+V +T + H++ G
Sbjct: 40 VKKVACGSYHTVFVTDDEHLYICG 63
Score = 47 (21.6 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 10/35 (28%), Positives = 21/35 (60%)
Query: 180 EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGT 214
++VK +A G++H + + +D L+ G + + GT
Sbjct: 38 KRVKKVACGSYHTVFVTDDEHLYICGIKKDPKHGT 72
>DICTYBASE|DDB_G0282633 [details] [associations]
symbol:DDB_G0282633 "putative guanine nucleotide
exchange factor (GEF)" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 dictyBase:DDB_G0282633
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
RefSeq:XP_640165.2 ProteinModelPortal:Q54S74
EnsemblProtists:DDB0234270 GeneID:8623703 KEGG:ddi:DDB_G0282633
OMA:RLAYLCN ProtClustDB:CLSZ2501699 Uniprot:Q54S74
Length = 919
Score = 207 (77.9 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 68/244 (27%), Positives = 117/244 (47%)
Query: 138 QVAAGGTHSVVLTREGHVWTWG--QPWPPGDIKQISVPVRVQGLE----QVKLIAVGAFH 191
Q G ++++LT G V++ G G K+ V + Q LE ++K IA G H
Sbjct: 198 QTEFGQNYNLILTDTGAVYSSGLCSYGKTGHKKKRDVLIPTQILELSNKRIKSIACGTHH 257
Query: 192 NLALQEDGALWAWGNNEYGQLGTGDT---QPRSQPIPVQGLSGLTLVD--IAAGGWHSTA 246
+LA+ + G +++WGN G+LG G+ P I V G + IAAG +S
Sbjct: 258 SLAMDDLGQVYSWGNGASGRLGLGNDFSIVPTPTLISVINRFGSNEIATAIAAGCDNSMI 317
Query: 247 LTDDGEVYGWGRGEHGRLGFGDNDKSS--KMVPQKVNLLAGEDIVQVSCGGTHSVALTRD 304
L +G+VY +G H +LG+ + D + + P+K+ + + ++C HSV L
Sbjct: 318 LGSNGDVYSFGSNLHYKLGYKECDGALGFQSTPKKIPSIL--QMKSIACASWHSVFLDLK 375
Query: 305 GHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDG-VDRRWIAKLVACGGRHTL 363
G +++ G +GRLG R +++ P + + +G + + + K +ACG T
Sbjct: 376 GRVYTCGSSTNGRLG--RAISSYSSF-YPERVSITNSKTNGTLPQEEVIKQIACGTNFTT 432
Query: 364 AIVE 367
+ E
Sbjct: 433 VLSE 436
Score = 200 (75.5 bits), Expect = 9.3e-13, P = 9.3e-13
Identities = 59/198 (29%), Positives = 97/198 (48%)
Query: 133 KLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPG-DIKQISVPVRVQGLEQVKL---IAVG 188
K I++++ T S++ + ++ WGQ +K + + +++ G
Sbjct: 144 KTIIKELKKLKT-SMMTMEQTSIYQWGQILTSSLTLKSCAKATNMLFNDEISAPIQTEFG 202
Query: 189 AFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQ--GLSGLTLVDIAAGGWHSTA 246
+NL L + GA+++ G YG+ TG + R IP Q LS + IA G HS A
Sbjct: 203 QNYNLILTDTGAVYSSGLCSYGK--TGHKKKRDVLIPTQILELSNKRIKSIACGTHHSLA 260
Query: 247 LTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLL----AGEDIVQVSCGGTHSVALT 302
+ D G+VY WG G GRLG G ND S P ++++ + E ++ G +S+ L
Sbjct: 261 MDDLGQVYSWGNGASGRLGLG-NDFSIVPTPTLISVINRFGSNEIATAIAAGCDNSMILG 319
Query: 303 RDGHIFSFGRGDHGRLGY 320
+G ++SFG H +LGY
Sbjct: 320 SNGDVYSFGSNLHYKLGY 337
Score = 194 (73.4 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 72/278 (25%), Positives = 124/278 (44%)
Query: 69 NALSNTKI---VQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIV 125
N L N +I +Q G + L + D G Y+ G YG+ TG +RD++
Sbjct: 186 NMLFNDEISAPIQTEFGQNYNLILTDTGAVYSSGLCSYGK----------TGHKKKRDVL 235
Query: 126 IPQRCAP--KLIVRQVAAGGTHSVVLTREGHVWTWGQPWPP-----GDIKQISVPVRVQ- 177
IP + ++ +A G HS+ + G V++WG D + P +
Sbjct: 236 IPTQILELSNKRIKSIACGTHHSLAMDDLGQVYSWGNGASGRLGLGNDFSIVPTPTLISV 295
Query: 178 ----GLEQVKL-IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS--QPIPVQGLS 230
G ++ IA G +++ L +G ++++G+N + +LG + Q P + S
Sbjct: 296 INRFGSNEIATAIAAGCDNSMILGSNGDVYSFGSNLHYKLGYKECDGALGFQSTPKKIPS 355
Query: 231 GLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNL-------- 282
L + IA WHS L G VY G +GRLG + SS P++V++
Sbjct: 356 ILQMKSIACASWHSVFLDLKGRVYTCGSSTNGRLGRAISSYSS-FYPERVSITNSKTNGT 414
Query: 283 LAGEDIV-QVSCGGTHSVALTRDGHIFSFGRGDHGRLG 319
L E+++ Q++CG + L+ G ++S+G +LG
Sbjct: 415 LPQEEVIKQIACGTNFTTVLSESGSLYSWGVNTKSQLG 452
Score = 191 (72.3 bits), Expect = 9.7e-12, P = 9.7e-12
Identities = 66/244 (27%), Positives = 110/244 (45%)
Query: 46 GSRNSLAICDDGKT---KTEN--IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGG 100
G+ S +C GKT K + IP+Q+ LSN +I A G H LA+DD G+ Y+WG
Sbjct: 213 GAVYSSGLCSYGKTGHKKKRDVLIPTQILELSNKRIKSIACGTHHSLAMDDLGQVYSWGN 272
Query: 101 NEYGQCGEEPERKDDTGRILRRDIV-IPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG 159
G+ G +D + ++ + R I +AAG +S++L G V+++G
Sbjct: 273 GASGRLG----LGNDFSIVPTPTLISVINRFGSNEIATAIAAGCDNSMILGSNGDVYSFG 328
Query: 160 QPWP--------PGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQ 211
G + S P ++ + Q+K IA ++H++ L G ++ G++ G+
Sbjct: 329 SNLHYKLGYKECDGALGFQSTPKKIPSILQMKSIACASWHSVFLDLKGRVYTCGSSTNGR 388
Query: 212 LGTGDTQ-----PRSQPIPVQGLSGL-----TLVDIAAGGWHSTALTDDGEVYGWGRGEH 261
LG + P I +G + IA G +T L++ G +Y WG
Sbjct: 389 LGRAISSYSSFYPERVSITNSKTNGTLPQEEVIKQIACGTNFTTVLSESGSLYSWGVNTK 448
Query: 262 GRLG 265
+LG
Sbjct: 449 SQLG 452
Score = 158 (60.7 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 46/142 (32%), Positives = 71/142 (50%)
Query: 180 EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLG----TGDTQPRSQPIPVQGLSGLTLV 235
E +K IA G L E G+L++WG N QLG G ++ SQP V L+ T+
Sbjct: 419 EVIKQIACGTNFTTVLSESGSLYSWGVNTKSQLGLINLVGISEYYSQPKLVTALNPYTIH 478
Query: 236 DIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGD------NDKSSKM--VPQKVNLLAGED 287
A G H AL+D GEV+ +G + GFG+ N K+ ++ G
Sbjct: 479 SFAVGDQHVVALSDQGEVFCYGDNSTLQCGFGEVLNFEINLTKVKIETTSSDAPIIGGGG 538
Query: 288 IVQVSCGGTHS-VALTRDGHIF 308
+ +VS GG+++ ++L+ D +IF
Sbjct: 539 VFKVSAGGSNTMISLSSDHNIF 560
Score = 130 (50.8 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 43/165 (26%), Positives = 74/165 (44%)
Query: 171 SVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQ-----PRSQPIP 225
S P ++ + Q+K IA ++H++ L G ++ G++ G+LG + P I
Sbjct: 348 STPKKIPSILQMKSIACASWHSVFLDLKGRVYTCGSSTNGRLGRAISSYSSFYPERVSIT 407
Query: 226 VQGLSGL-----TLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGF----GDNDKSSKMV 276
+G + IA G +T L++ G +Y WG +LG G ++ S+
Sbjct: 408 NSKTNGTLPQEEVIKQIACGTNFTTVLSESGSLYSWGVNTKSQLGLINLVGISEYYSQ-- 465
Query: 277 PQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYG 321
P+ V L I + G H VAL+ G +F +G + G+G
Sbjct: 466 PKLVTALNPYTIHSFAVGDQHVVALSDQGEVFCYGDNSTLQCGFG 510
Score = 61 (26.5 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 14/56 (25%), Positives = 29/56 (51%)
Query: 7 IIAWGSGEDGQLGIGNN----EEREWVCVVKALEPYKVRSVVA-GSRNSLAICDDG 57
+ +WG+G G+LG+GN+ + V+ ++ + +A G NS+ + +G
Sbjct: 267 VYSWGNGASGRLGLGNDFSIVPTPTLISVINRFGSNEIATAIAAGCDNSMILGSNG 322
Score = 46 (21.3 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 11/40 (27%), Positives = 25/40 (62%)
Query: 21 GNNEEREWVCVVKALE--PYKVRSVVAGSRNSLAICDDGK 58
G+ ++R+ + + LE +++S+ G+ +SLA+ D G+
Sbjct: 227 GHKKKRDVLIPTQILELSNKRIKSIACGTHHSLAMDDLGQ 266
>FB|FBgn0002638 [details] [associations]
symbol:Rcc1 "Regulator of chromosome condensation 1 ortholog
(H. sapiens)" species:7227 "Drosophila melanogaster" [GO:0005634
"nucleus" evidence=ISS;NAS;IDA] [GO:0007417 "central nervous system
development" evidence=IDA] [GO:0030261 "chromosome condensation"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS;IDA]
[GO:0007076 "mitotic chromosome condensation" evidence=NAS]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISS;NAS] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0007346
"regulation of mitotic cell cycle" evidence=IDA] [GO:0006607
"NLS-bearing substrate import into nucleus" evidence=IMP]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0046822
"regulation of nucleocytoplasmic transport" evidence=IMP]
[GO:0050767 "regulation of neurogenesis" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0007346 GO:GO:0005737 EMBL:AE014296
GO:GO:0051301 GO:GO:0007067 GO:GO:0007417 GO:GO:0046822
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0050767 PDB:3MVD PDBsum:3MVD
GeneTree:ENSGT00700000104160 EMBL:X58530 EMBL:AY070540 PIR:S15028
RefSeq:NP_523943.1 RefSeq:NP_729118.1 RefSeq:NP_729119.1
UniGene:Dm.8023 ProteinModelPortal:P25171 SMR:P25171 DIP:DIP-17766N
IntAct:P25171 MINT:MINT-781282 STRING:P25171 PaxDb:P25171
EnsemblMetazoa:FBtr0077074 EnsemblMetazoa:FBtr0077075
EnsemblMetazoa:FBtr0077076 GeneID:38669 KEGG:dme:Dmel_CG10480
CTD:38669 FlyBase:FBgn0002638 InParanoid:P25171 KO:K11493
OMA:PFEAIWA OrthoDB:EOG437PW4 PhylomeDB:P25171 ChiTaRS:Bj1
GenomeRNAi:38669 NextBio:809817 Bgee:P25171 GermOnline:CG10480
Uniprot:P25171
Length = 547
Score = 203 (76.5 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 71/268 (26%), Positives = 118/268 (44%)
Query: 47 SRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQC 106
S ++ + DG +T P ++ + T A G H + + G+ + G E GQ
Sbjct: 156 SHGNMGLTIDGNKRT---P--IDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQL 210
Query: 107 GEEPERK-DDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGH---VWTWG--- 159
G ER GR +RD++ P + A T+ RE +W G
Sbjct: 211 GRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNN 270
Query: 160 --QPWPPGDIKQISV-PVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGD 216
Q K+ ++ P++ + L+ ++ IA G H + L D G EYG+LG GD
Sbjct: 271 FKQLAHETKGKEFALTPIKTE-LKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGD 329
Query: 217 TQPR-SQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKM 275
+ +P V+ L+ +V + G S A+T DG++Y WG G + +LG GD D +
Sbjct: 330 VKDVVEKPTIVKKLTE-KIVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEP 388
Query: 276 VPQKVNLLAGEDIVQVSCGGTHSVALTR 303
+ G+ ++ S GG H++ L +
Sbjct: 389 IVVVSKNTQGKHMLLASGGGQHAIFLVK 416
Score = 195 (73.7 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 50/139 (35%), Positives = 73/139 (52%)
Query: 199 GALWAWGNNEYGQLGTG-DTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWG 257
G + GN + GQLG G D R + PV G+ VDI+AGG H+ LT G++Y +G
Sbjct: 42 GNVLVCGNGDVGQLGLGEDILERKRLSPVAGIPDA--VDISAGGMHNLVLTKSGDIYSFG 99
Query: 258 RGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFG--RGDH 315
+ G LG ++ S+ P ++L G+ + +S G +HS L DG +F++G R H
Sbjct: 100 CNDEGALGRDTSEDGSESKPDLIDL-PGKALC-ISAGDSHSACLLEDGRVFAWGSFRDSH 157
Query: 316 GRLGY---GRKVTTGQPME 331
G +G G K T ME
Sbjct: 158 GNMGLTIDGNKRTPIDLME 176
Score = 183 (69.5 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 93/344 (27%), Positives = 147/344 (42%)
Query: 55 DDGKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGG--NEYGQCGEEPER 112
D + +E+ P ++ + A G H + + GR +AWG + +G G +
Sbjct: 109 DTSEDGSESKPDLIDLPGKALCISA--GDSHSACLLEDGRVFAWGSFRDSHGNMGLTIDG 166
Query: 113 KDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISV 172
T L V C+ +A+G H V+LT G V+T G G + ++S
Sbjct: 167 NKRTPIDLMEGTVC---CS-------IASGADHLVILTTAGKVFTVGCA-EQGQLGRLSE 215
Query: 173 -PVRVQG-------LEQVKLI--------AVGAFHNLALQEDG---ALWAWGNNEYGQLG 213
+ +G L +LI A+ A + + +WA G N + QL
Sbjct: 216 RSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQLA 275
Query: 214 TGDTQPRSQPI-PVQGLSGLTLVDIAAGGWHSTA-LTDDGEVYGWGRGEHGRLGFGD-ND 270
+T+ + + P++ + L + AGG H T LT D + GR E+GRLG GD D
Sbjct: 276 H-ETKGKEFALTPIK--TELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKD 332
Query: 271 KSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPM 330
K P V L E IV V CG S A+T DG ++S+G G + +LG G G
Sbjct: 333 VVEK--PTIVKKLT-EKIVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVG----DGDDE 385
Query: 331 EVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVEWQTEESK 374
PI + + G + L + GG+H + +V+ ++ K
Sbjct: 386 LEPIVVVSKNTQGKHM------LLASGGGQHAIFLVKADKQDQK 423
Score = 154 (59.3 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 50/164 (30%), Positives = 83/164 (50%)
Query: 115 DTGRI-LRRDIVIPQRCAPKLIVRQ---VAAGGTHSVVLTREGHVWTWG--QPWPPG-DI 167
D G++ L DI+ +R +P + ++AGG H++VLT+ G ++++G G D
Sbjct: 51 DVGQLGLGEDILERKRLSPVAGIPDAVDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDT 110
Query: 168 KQI---SVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGN--NEYGQLG-TGDTQPRS 221
+ S P + + I+ G H+ L EDG ++AWG+ + +G +G T D R+
Sbjct: 111 SEDGSESKPDLIDLPGKALCISAGDSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRT 170
Query: 222 QPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLG 265
P+ + G IA+G H LT G+V+ G E G+LG
Sbjct: 171 ---PIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLG 211
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 66/266 (24%), Positives = 110/266 (41%)
Query: 77 VQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIV-IPQRCAPKLI 135
V + GG H L + G Y++G N+ G G + +D G + D++ +P +
Sbjct: 77 VDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTS--ED-GSESKPDLIDLPGKALC--- 130
Query: 136 VRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISV------PVRVQGLEQVKLIAVGA 189
++AG +HS L +G V+ WG +++ P+ + IA GA
Sbjct: 131 ---ISAGDSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGA 187
Query: 190 FHNLALQEDGALWAWGNNEYGQLG-------TGDTQPRSQPI--PVQGLSGLTLVDIAAG 240
H + L G ++ G E GQLG +G+ + + + P Q + +T
Sbjct: 188 DHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLI--ITRAKPFEA 245
Query: 241 GW---HSTALTDDGEVYGWGRGEHG--RLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGG 295
W + T + + W G + +L K + P K L +DI ++ G
Sbjct: 246 IWATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTEL---KDIRHIAGGQ 302
Query: 296 THSVALTRDGHIFSFGRGDHGRLGYG 321
H+V LT D GR ++GRLG G
Sbjct: 303 HHTVILTTDLKCSVVGRPEYGRLGLG 328
>UNIPROTKB|I3L8I2 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000025619
Uniprot:I3L8I2
Length = 676
Score = 204 (76.9 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 47/138 (34%), Positives = 69/138 (50%)
Query: 182 VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGG 241
+K +A G L + G + +G+ G LG G SQP V+ L G +V +A G
Sbjct: 384 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGA 443
Query: 242 WHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVAL 301
H AL+ + E++ WGRG+ GRLG G + S PQ V + G++ +V CG S+ L
Sbjct: 444 SHVLALSTERELFAWGRGDGGRLGLGTRE--SHCCPQLVPMPPGQEAQRVVCGIDSSMIL 501
Query: 302 TRDGHIFSFGRGDHGRLG 319
T G + G +LG
Sbjct: 502 TVPGQALACGSNRFNKLG 519
Score = 202 (76.2 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 55/151 (36%), Positives = 83/151 (54%)
Query: 218 QPRSQPIP--VQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGD-NDKSSK 274
QP+ Q + ++G SG+T+ +A G + LTD G + +G G +G LG G ND S
Sbjct: 366 QPQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQ- 424
Query: 275 MVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPI 334
P V L G ++VQV+CG +H +AL+ + +F++GRGD GRLG G + + P VP+
Sbjct: 425 --PTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPM 482
Query: 335 NIPAPRNAGD---GVDRRWI----AKLVACG 358
P + A G+D I + +ACG
Sbjct: 483 --PPGQEAQRVVCGIDSSMILTVPGQALACG 511
Score = 156 (60.0 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 66/261 (25%), Positives = 109/261 (41%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P+ V AL ++VQ A G H LA+ + +AWG + G+ G ++
Sbjct: 425 PTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQL----- 479
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG----------------QPWPPGDIK 168
+P P ++V G S++LT G G +P P ++
Sbjct: 480 -VPM--PPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVE 536
Query: 169 QISV--PVRVQGLEQVKLIAV--GAFHNLALQE-DGALWAWGNNEYGQLGTGDTQPRSQP 223
+ P+ L+Q L++V G H+ A+ G + +G+N + P
Sbjct: 537 EAVTFTPLGSAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSNA--------RRVSRAP 588
Query: 224 IPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLL 283
VQGL G+ + +A G + A+ +GEV+ WG+G GRLG D D P +++
Sbjct: 589 CRVQGLQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLGRKDEDAGLPR-PVQLDET 647
Query: 284 AGEDIVQVSC-GGTHSVALTR 303
+ VSC G +A+ R
Sbjct: 648 HPYTVTSVSCCHGNTLLAVRR 668
Score = 146 (56.5 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 54/213 (25%), Positives = 89/213 (41%)
Query: 138 QVAAGGTHSVVLTREGHVWTWGQP----WPPGDIKQISVP--VRVQGLEQVKLIAVGAFH 191
QVA G +H + L+ E ++ WG+ G + P V + ++ + + G
Sbjct: 438 QVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMPPGQEAQRVVCGIDS 497
Query: 192 NLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLS-GLTLVDIAAGGWHSTAL--T 248
++ L G A G+N + +LG +P P Q + +T + + L
Sbjct: 498 SMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLDQEPLLSV 557
Query: 249 DDGEVYGWG-RGEHGRL-GFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGH 306
D G + G FG N + P +V L G I V+CG +VA+ +G
Sbjct: 558 DLGTAHSAAVTXASGDCYTFGSNARRVSRAPCRVQGLQGIKISTVACGDAFTVAIGAEGE 617
Query: 307 IFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
+FS+G+G GRLG + G P V ++ P
Sbjct: 618 VFSWGKGARGRLGR-KDEDAGLPRPVQLDETHP 649
Score = 128 (50.1 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 42/137 (30%), Positives = 59/137 (43%)
Query: 136 VRQVAAGGTHSVVLTREGHVWTWGQP----WPPGDIKQISVPVRVQ---GLEQVKLIAVG 188
++ VA G + LT G + T+G G + IS P V+ G E V+ +A G
Sbjct: 384 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQ-VACG 442
Query: 189 AFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALT 248
A H LAL + L+AWG + G+LG G + P V G + G S LT
Sbjct: 443 ASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMPPGQEAQRVVCGIDSSMILT 502
Query: 249 DDGEVYGWGRGEHGRLG 265
G+ G +LG
Sbjct: 503 VPGQALACGSNRFNKLG 519
Score = 67 (28.6 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAI 53
I+ +GSG +G LG G+ + +V+AL Y++ V G+ + LA+
Sbjct: 403 IMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHVLAL 449
>UNIPROTKB|I3L5B6 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000029356 OMA:PEREMAM
Uniprot:I3L5B6
Length = 680
Score = 204 (76.9 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 47/138 (34%), Positives = 69/138 (50%)
Query: 182 VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGG 241
+K +A G L + G + +G+ G LG G SQP V+ L G +V +A G
Sbjct: 388 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGA 447
Query: 242 WHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVAL 301
H AL+ + E++ WGRG+ GRLG G + S PQ V + G++ +V CG S+ L
Sbjct: 448 SHVLALSTERELFAWGRGDGGRLGLGTRE--SHCCPQLVPMPPGQEAQRVVCGIDSSMIL 505
Query: 302 TRDGHIFSFGRGDHGRLG 319
T G + G +LG
Sbjct: 506 TVPGQALACGSNRFNKLG 523
Score = 202 (76.2 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 55/151 (36%), Positives = 83/151 (54%)
Query: 218 QPRSQPIP--VQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGD-NDKSSK 274
QP+ Q + ++G SG+T+ +A G + LTD G + +G G +G LG G ND S
Sbjct: 370 QPQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQ- 428
Query: 275 MVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPI 334
P V L G ++VQV+CG +H +AL+ + +F++GRGD GRLG G + + P VP+
Sbjct: 429 --PTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPM 486
Query: 335 NIPAPRNAGD---GVDRRWI----AKLVACG 358
P + A G+D I + +ACG
Sbjct: 487 --PPGQEAQRVVCGIDSSMILTVPGQALACG 515
Score = 155 (59.6 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 63/250 (25%), Positives = 104/250 (41%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P+ V AL ++VQ A G H LA+ + +AWG + G+ G ++
Sbjct: 429 PTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQL----- 483
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG----------------QPWPPGDIK 168
+P P ++V G S++LT G G +P P ++
Sbjct: 484 -VPM--PPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVE 540
Query: 169 QISV--PVRVQGLEQVKLIAV--GAFHNLALQE-DGALWAWGNNEYGQLGTGDTQPRSQP 223
+ P+ L+Q L++V G H+ A+ G + +G+N + P
Sbjct: 541 EAVTFTPLGSAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSNA--------RRVSRAP 592
Query: 224 IPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLL 283
VQGL G+ + +A G + A+ +GEV+ WG+G GRLG D D P +++
Sbjct: 593 CRVQGLQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLGRKDEDAGLPR-PVQLDET 651
Query: 284 AGEDIVQVSC 293
+ VSC
Sbjct: 652 HPYTVTSVSC 661
Score = 146 (56.5 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 54/213 (25%), Positives = 89/213 (41%)
Query: 138 QVAAGGTHSVVLTREGHVWTWGQP----WPPGDIKQISVP--VRVQGLEQVKLIAVGAFH 191
QVA G +H + L+ E ++ WG+ G + P V + ++ + + G
Sbjct: 442 QVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMPPGQEAQRVVCGIDS 501
Query: 192 NLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLS-GLTLVDIAAGGWHSTAL--T 248
++ L G A G+N + +LG +P P Q + +T + + L
Sbjct: 502 SMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLDQEPLLSV 561
Query: 249 DDGEVYGWG-RGEHGRL-GFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGH 306
D G + G FG N + P +V L G I V+CG +VA+ +G
Sbjct: 562 DLGTAHSAAVTXASGDCYTFGSNARRVSRAPCRVQGLQGIKISTVACGDAFTVAIGAEGE 621
Query: 307 IFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
+FS+G+G GRLG + G P V ++ P
Sbjct: 622 VFSWGKGARGRLGR-KDEDAGLPRPVQLDETHP 653
Score = 128 (50.1 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 42/137 (30%), Positives = 59/137 (43%)
Query: 136 VRQVAAGGTHSVVLTREGHVWTWGQP----WPPGDIKQISVPVRVQ---GLEQVKLIAVG 188
++ VA G + LT G + T+G G + IS P V+ G E V+ +A G
Sbjct: 388 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQ-VACG 446
Query: 189 AFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALT 248
A H LAL + L+AWG + G+LG G + P V G + G S LT
Sbjct: 447 ASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMPPGQEAQRVVCGIDSSMILT 506
Query: 249 DDGEVYGWGRGEHGRLG 265
G+ G +LG
Sbjct: 507 VPGQALACGSNRFNKLG 523
Score = 67 (28.6 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAI 53
I+ +GSG +G LG G+ + +V+AL Y++ V G+ + LA+
Sbjct: 407 IMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHVLAL 453
>UNIPROTKB|J9NZT9 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AAEX03016754 EMBL:AAEX03016753
Ensembl:ENSCAFT00000045241 Uniprot:J9NZT9
Length = 865
Score = 208 (78.3 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 49/137 (35%), Positives = 73/137 (53%)
Query: 198 DGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWG 257
+GA++ WG N GQLG D + R P V+ L +V I+ G H+ LT G V+ +G
Sbjct: 23 EGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 82
Query: 258 RGEHGRLGFGD-NDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALT-RDGHIFSFGRGDH 315
G G+LG ND+ + P++V L G ++ Q++CG H++A G I++FG G
Sbjct: 83 AGSCGQLGHDSMNDEVN---PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAK 139
Query: 316 GRLGYGRKVTTGQPMEV 332
G+LG G P V
Sbjct: 140 GQLGTGHTCNVKCPSPV 156
Score = 164 (62.8 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 42/118 (35%), Positives = 60/118 (50%)
Query: 250 DGEVYGWGRGEHGRLGFGDN-DKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIF 308
+G V+GWG G+LG D D+ S P V LL + +V +SCG H+ LT+ G +F
Sbjct: 23 EGAVFGWGMNNAGQLGLSDEEDRES---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVF 79
Query: 309 SFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIV 366
+FG G G+LG+ M +N PR + + +ACG +HTLA V
Sbjct: 80 TFGAGSCGQLGH-------DSMNDEVN---PRRVLELMGSE--VTQIACGRQHTLAFV 125
Score = 130 (50.8 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 48/148 (32%), Positives = 70/148 (47%)
Query: 92 QGRAYAWGGNEYGQCG--EEPERKDDTG-RILRRDIVIPQRCAPKLIVRQVAAGGTHSVV 148
+G + WG N GQ G +E +R+ ++LR V+ ++ G H+ V
Sbjct: 23 EGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVV-----------YISCGEEHTAV 71
Query: 149 LTREGHVWTWGQPWPPGDIKQISV-----PVRVQGL--EQVKLIAVGAFHNLA-LQEDGA 200
LT+ G V+T+G G + S+ P RV L +V IA G H LA + G
Sbjct: 72 LTKSGGVFTFGAG-SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 130
Query: 201 LWAWGNNEYGQLGTGDTQPRSQPIPVQG 228
++A+G GQLGTG T P PV+G
Sbjct: 131 IYAFGCGAKGQLGTGHTCNVKCPSPVKG 158
Score = 37 (18.1 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 160 QPWPPGDIKQISVP 173
QPW G K I +P
Sbjct: 5 QPWTAGSGKGIPLP 18
>FB|FBgn0045980 [details] [associations]
symbol:niki "nimA-like kinase" species:7227 "Drosophila
melanogaster" [GO:0004702 "receptor signaling protein
serine/threonine kinase activity" evidence=ISS;NAS] [GO:0006468
"protein phosphorylation" evidence=IEA;NAS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004702 HSSP:O14965
PRINTS:PR00633 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 RefSeq:NP_651293.1 UniGene:Dm.27397
ProteinModelPortal:Q9VC32 SMR:Q9VC32 PRIDE:Q9VC32
EnsemblMetazoa:FBtr0084737 GeneID:42959 KEGG:dme:Dmel_CG10951
UCSC:CG10951-RA CTD:42959 FlyBase:FBgn0045980 InParanoid:Q9VC32
OMA:WRHYPTK OrthoDB:EOG4FJ6QP PhylomeDB:Q9VC32 GenomeRNAi:42959
NextBio:831528 ArrayExpress:Q9VC32 Bgee:Q9VC32 Uniprot:Q9VC32
Length = 841
Score = 202 (76.2 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 56/218 (25%), Positives = 104/218 (47%)
Query: 127 PQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISV------PVRVQGLE 180
P + PK ++ VA +H VV+ +G + WG+ G + ++ P R++ +
Sbjct: 445 PIQLPPKAVIVDVAMSDSHFVVVNEDGSAYAWGEG-THGQLGLTALEAWKHYPSRMESVR 503
Query: 181 QVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIA 238
+++ G + + + G+L + G+N + LG + + P + L+ + + +A
Sbjct: 504 NYHVVSACAGDGFTILVTQAGSLLSCGSNAHLALGQDEQRNYHSPKLIARLADVRVEQVA 563
Query: 239 AGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLL-AGEDIVQVSCGGTH 297
AG H AL+ +G VY WG G LG G+ + K PQK+ L ++ CG
Sbjct: 564 AGLQHVLALSREGAVYVWGTSTCGALGLGNYQQQQKF-PQKILLSHVKTKPSKIYCGPDT 622
Query: 298 SVALTRDGHIFSFGRGDHGRLGYGR--KVTTGQPMEVP 333
S L +G + G D+ +LG+ R K+T + +++P
Sbjct: 623 SAVLFANGELHVCGSNDYNKLGFQRSAKITAFKKVQLP 660
Score = 193 (73.0 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 70/254 (27%), Positives = 112/254 (44%)
Query: 76 IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLI 135
IV A+ H + V++ G AYAWG +GQ G T +
Sbjct: 454 IVDVAMSDSHFVVVNEDGSAYAWGEGTHGQLGL-------TALEAWKHYPSRMESVRNYH 506
Query: 136 VRQVAAGGTHSVVLTREGHVWTWGQP--WPPGDIKQISV--PVRVQGLEQVKL--IAVGA 189
V AG ++++T+ G + + G G +Q + P + L V++ +A G
Sbjct: 507 VVSACAGDGFTILVTQAGSLLSCGSNAHLALGQDEQRNYHSPKLIARLADVRVEQVAAGL 566
Query: 190 FHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVD---IAAGGWHSTA 246
H LAL +GA++ WG + G LG G+ Q + Q P + L I G S
Sbjct: 567 QHVLALSREGAVYVWGTSTCGALGLGNYQ-QQQKFPQKILLSHVKTKPSKIYCGPDTSAV 625
Query: 247 LTDDGEVYGWGRGEHGRLGFGDNDKSSKMVP-QKVNLLAGEDIVQVSCGGTHSVALTRDG 305
L +GE++ G ++ +LGF +S+K+ +KV L + Q THSV L G
Sbjct: 626 LFANGELHVCGSNDYNKLGF---QRSAKITAFKKVQL--PHKVTQACFSSTHSVFLVEGG 680
Query: 306 HIFSFGRGDHGRLG 319
++++ GR G+ G
Sbjct: 681 YVYTMGRNAEGQRG 694
Score = 150 (57.9 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 69/269 (25%), Positives = 116/269 (43%)
Query: 62 ENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILR 121
++ PS++ ++ N +V A G + V G + G N + G++ +R + +++
Sbjct: 493 KHYPSRMESVRNYHVVSACAGDGFTILVTQAGSLLSCGSNAHLALGQDEQRNYHSPKLIA 552
Query: 122 RDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPP----GDIKQIS-VPVRV 176
R + R V QVAAG H + L+REG V+ WG G+ +Q P ++
Sbjct: 553 R--LADVR------VEQVAAGLQHVLALSREGAVYVWGTSTCGALGLGNYQQQQKFPQKI 604
Query: 177 QGLEQVKL----IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGL 232
L VK I G + L +G L G+N+Y +LG + + VQ +
Sbjct: 605 L-LSHVKTKPSKIYCGPDTSAVLFANGELHVCGSNDYNKLGFQRSAKITAFKKVQLPHKV 663
Query: 233 TLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVS 292
T ++ HS L + G VY GR G+ G +S P V+ + IV+ +
Sbjct: 664 TQACFSST--HSVFLVEGGYVYTMGRNAEGQRGI--RHCNSVDHPTLVDSVKSRYIVKAN 719
Query: 293 CGGTHSVALTRDGHIFSFGRGDHGRLGYG 321
C ++ + D I +G + G G G
Sbjct: 720 CSDQCTIVASEDNIITVWGTRN-GLPGIG 747
Score = 110 (43.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 48/233 (20%), Positives = 91/233 (39%)
Query: 46 GSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQ 105
GS LA+ D + + + P + L++ ++ Q A G H LA+ +G Y WG + G
Sbjct: 530 GSNAHLALGQD-EQRNYHSPKLIARLADVRVEQVAAGLQHVLALSREGAVYVWGTSTCGA 588
Query: 106 CGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPG 165
G ++ + ++ ++ + P ++ G S VL G + G
Sbjct: 589 LGLGNYQQQQ--KFPQKILLSHVKTKPS----KIYCGPDTSAVLFANGELHVCGS----N 638
Query: 166 DIKQISVP--VRVQGLEQVKL---IAVGAF---HNLALQEDGALWAWGNNEYGQLGTGDT 217
D ++ ++ ++V+L + F H++ L E G ++ G N GQ G
Sbjct: 639 DYNKLGFQRSAKITAFKKVQLPHKVTQACFSSTHSVFLVEGGYVYTMGRNAEGQRGIRHC 698
Query: 218 QPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDND 270
P V + +V + ++D + WG +G G G +
Sbjct: 699 NSVDHPTLVDSVKSRYIVKANCSDQCTIVASEDNIITVWGT-RNGLPGIGSTN 750
Score = 61 (26.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 6 SIIAWGSGEDGQLGIGNNEE-REWVCVVKALEPYKVRSVVAGSRNSLAICDDG 57
S AWG G GQLG+ E + + ++++ Y V S AG ++ + G
Sbjct: 472 SAYAWGEGTHGQLGLTALEAWKHYPSRMESVRNYHVVSACAGDGFTILVTQAG 524
>UNIPROTKB|A6NED2 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH471101 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 EMBL:AC068831
EMBL:BC113826 EMBL:BC140708 EMBL:BC140709 IPI:IPI00399158
RefSeq:NP_001017919.1 RefSeq:NP_291022.2 UniGene:Hs.655895
ProteinModelPortal:A6NED2 SMR:A6NED2 STRING:A6NED2
PhosphoSite:A6NED2 PaxDb:A6NED2 PRIDE:A6NED2
Ensembl:ENST00000394258 Ensembl:ENST00000556618 GeneID:91433
KEGG:hsa:91433 UCSC:uc002bqj.3 CTD:91433 GeneCards:GC15P091498
HGNC:HGNC:30457 HPA:HPA039683 HPA:HPA040776 neXtProt:NX_A6NED2
PharmGKB:PA142671092 eggNOG:NOG305770 HOGENOM:HOG000154085
HOVERGEN:HBG061852 InParanoid:A6NED2 OMA:ERPGAWF OrthoDB:EOG41NTMF
PhylomeDB:A6NED2 GenomeRNAi:91433 NextBio:77244 ArrayExpress:A6NED2
Bgee:A6NED2 CleanEx:HS_RCCD1 Genevestigator:A6NED2 Uniprot:A6NED2
Length = 376
Score = 194 (73.4 bits), Expect = 7.7e-13, P = 7.7e-13
Identities = 66/239 (27%), Positives = 113/239 (47%)
Query: 131 APKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGLEQVKL-- 184
AP+L RQ+ G H+++L G V++WG G ++ P ++ L+ + +
Sbjct: 155 APELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAE 214
Query: 185 IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHS 244
+A G +H++ + E G ++ WG NE GQL +P + L+ D +
Sbjct: 215 VAAGGWHSVCVSETGDIYIWGWNESGQLA----------LPTRNLAE----DGETVAREA 260
Query: 245 TALTDDG-EVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTR 303
T L +DG +V G E G + + P ++L G D V+ SCG H+ +TR
Sbjct: 261 TELNEDGSQVKRTGGAEDGAPA---PFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTR 317
Query: 304 DGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHT 362
G ++++G G +G+LG+ + TT ++ PR VD++ K V CG +T
Sbjct: 318 TGELYTWGWGKYGQLGH--EDTT--------SLDRPRRVEYFVDKQLQVKAVTCGPWNT 366
Score = 182 (69.1 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 58/193 (30%), Positives = 89/193 (46%)
Query: 78 QAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVR 137
Q +G H L +D G+ ++WGG +GQ G + R+L L++
Sbjct: 162 QLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLE--------ALQGLVMA 213
Query: 138 QVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQE 197
+VAAGG HSV ++ G ++ WG W + Q+++P R E + +A A L E
Sbjct: 214 EVAAGGWHSVCVSETGDIYIWG--W--NESGQLALPTRNLA-EDGETVAREATE---LNE 265
Query: 198 DGA-LWAWGNNEYGQLGTG-DTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYG 255
DG+ + G E G QP P + G V + G H+ +T GE+Y
Sbjct: 266 DGSQVKRTGGAEDGAPAPFIAVQPF--PALLDLPMGSDAVKASCGSRHTAVVTRTGELYT 323
Query: 256 WGRGEHGRLGFGD 268
WG G++G+LG D
Sbjct: 324 WGWGKYGQLGHED 336
Score = 145 (56.1 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 48/190 (25%), Positives = 77/190 (40%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDT 116
G + E P + AL + + A GGWH + V + G Y WG NE GQ +
Sbjct: 193 GTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAED 252
Query: 117 GRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRV 176
G + R+ ++ A G + + QP+P + +P+
Sbjct: 253 GETVAREATELNEDGSQVKRTGGAEDGAPAPFIAV--------QPFPA----LLDLPM-- 298
Query: 177 QGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGL--SGLTL 234
G + VK + G+ H + G L+ WG +YGQLG DT +P V+ L +
Sbjct: 299 -GSDAVKA-SCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQV 356
Query: 235 VDIAAGGWHS 244
+ G W++
Sbjct: 357 KAVTCGPWNT 366
>UNIPROTKB|F1RMH6 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:CT868688
Ensembl:ENSSSCT00000002041 Uniprot:F1RMH6
Length = 382
Score = 194 (73.4 bits), Expect = 8.1e-13, P = 8.1e-13
Identities = 69/230 (30%), Positives = 107/230 (46%)
Query: 81 IGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVA 140
+G H L +D G+ ++WGG +GQ G + R+L +P + +VA
Sbjct: 171 LGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEREPRVLEALQGLP--------MAEVA 222
Query: 141 AGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGA 200
AGG HSV ++ G ++ WG W + Q+++P R E K I A L EDG+
Sbjct: 223 AGGWHSVCVSETGDIYIWG--W--NESGQLALPARSLA-EDGKTITGDA---PGLNEDGS 274
Query: 201 LWAWGNNEYGQLGTGDTQPRSQPIP-VQGLS-GLTLVDIAAGGWHSTALTDDGEVYGWGR 258
A E G+ G QP P + L G V + G H+ +T GE+Y WG
Sbjct: 275 E-AKRATE-GEDGGPTPFIAVQPFPALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGW 332
Query: 259 GEHGRLGFGDNDKSSKMVPQKVNLLAGEDI-VQ-VSCG--GTHSVALTRD 304
G++G+LG D + P +V + + V+ VSCG T+ A+ ++
Sbjct: 333 GKYGQLGHKDTTSLDR--PCRVEYFVDKQLQVRTVSCGPWNTYVFAVEKE 380
Score = 187 (70.9 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 57/210 (27%), Positives = 99/210 (47%)
Query: 131 APKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGLEQVKL-- 184
AP L R++ G H+++L G V++WG G ++ P ++ L+ + +
Sbjct: 161 APTLRARRLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEREPRVLEALQGLPMAE 220
Query: 185 IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLS--GLTLVDIAAGGW 242
+A G +H++ + E G ++ WG NE GQL +P + L+ G T+ A G
Sbjct: 221 VAAGGWHSVCVSETGDIYIWGWNESGQLA----------LPARSLAEDGKTITGDAPG-- 268
Query: 243 HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALT 302
L +DG R G G + + P ++L G D V+ SCG H+ +T
Sbjct: 269 ----LNEDGSEAK--RATEGEDGGPTPFIAVQPFPALLDLPLGSDAVKASCGSRHTAVVT 322
Query: 303 RDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
R G ++++G G +G+LG+ + +P V
Sbjct: 323 RTGELYTWGWGKYGQLGHKDTTSLDRPCRV 352
Score = 151 (58.2 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 52/191 (27%), Positives = 80/191 (41%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDT 116
G + E P + AL + + A GGWH + V + G Y WG NE GQ +
Sbjct: 199 GTLEAEREPRVLEALQGLPMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPARSLAED 258
Query: 117 GRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRV 176
G+ + D AP L G+ + T EG G P P ++ + +
Sbjct: 259 GKTITGD-------APGL-----NEDGSEAKRAT-EGED---GGPTPFIAVQPFPALLDL 302
Query: 177 Q-GLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGL--SGLT 233
G + VK + G+ H + G L+ WG +YGQLG DT +P V+ L
Sbjct: 303 PLGSDAVKA-SCGSRHTAVVTRTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDKQLQ 361
Query: 234 LVDIAAGGWHS 244
+ ++ G W++
Sbjct: 362 VRTVSCGPWNT 372
>UNIPROTKB|B4DFC0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 UniGene:Hs.32470 HGNC:HGNC:17499
EMBL:AC055860 EMBL:AC124058 EMBL:AC124078 EMBL:AK294022
IPI:IPI00977685 SMR:B4DFC0 STRING:B4DFC0 Ensembl:ENST00000532265
UCSC:uc010rcz.1 Uniprot:B4DFC0
Length = 174
Score = 174 (66.3 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 56/170 (32%), Positives = 80/170 (47%)
Query: 148 VLTREGHVWT-----WGQPWPPGDIKQISVPVRVQ-GLEQVKLIAVGAFHNLALQEDGAL 201
+LT G V + +GQ P ++ VP ++ E+V IA G H +A G +
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIV 60
Query: 202 WAWGNN--EYGQ-LGTGDTQP----RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVY 254
+ WG G+ L G T P +P V GL + + AG HS +LTD GEVY
Sbjct: 61 FQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVY 120
Query: 255 GWGRGEHGRLGFGDNDKSSKMVPQKV--NLLAGEDIVQVSCGGTHSVALT 302
WG +HG+L N+ + VPQK+ + E + + G TH VA T
Sbjct: 121 VWGSNKHGQLA---NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQT 167
Score = 129 (50.5 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 44/130 (33%), Positives = 61/130 (46%)
Query: 195 LQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQ-GLSGLTLVDIAAGGWHSTALTDDGEV 253
L E+G + + G+N +GQLG PR +P L +V IAAG H+ A T G V
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHG-PRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIV 60
Query: 254 YGWGRG--EHGR-LGFGDNDKS--SKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIF 308
+ WG G GR L G + P +V L + V G HS +LT G ++
Sbjct: 61 FQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVY 120
Query: 309 SFGRGDHGRL 318
+G HG+L
Sbjct: 121 VWGSNKHGQL 130
Score = 125 (49.1 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 51/173 (29%), Positives = 72/173 (41%)
Query: 91 DQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCA-PKLIVRQVAAGGTHSVVL 149
+ G+ + G N +GQ G P R V+PQ K V +AAG H+V
Sbjct: 4 ENGQVLSCGSNSFGQLGV-PHGP--------RRCVVPQAIELHKEKVVCIAAGLRHAVAA 54
Query: 150 TREGHVWTWGQPWP-------PGDIKQI----SVPVRVQGLEQVKLIAV--GAFHNLALQ 196
T G V+ WG PG + P RV GLE K + V G+ H+ +L
Sbjct: 55 TASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLT 114
Query: 197 EDGALWAWGNNEYGQLGTGDT-QPRSQPIPVQGLSGLTLVDIAAGGWHSTALT 248
+ G ++ WG+N++GQL P Q I + I +G H A T
Sbjct: 115 DAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQT 167
Score = 98 (39.6 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 29/96 (30%), Positives = 39/96 (40%)
Query: 61 TENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRIL 120
T PS+V L N+K + G H ++ D G Y WG N++GQ E L
Sbjct: 85 TAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANE-------AAFL 137
Query: 121 RRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVW 156
I C V + +G TH V T G +W
Sbjct: 138 PVPQKIEAHCFQNEKVTAIWSGWTHLVAQT--GLLW 171
Score = 63 (27.2 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVV-KALEPYK--VRSVVAGSRNSLAICDDG 57
+++ GS GQLG+ + R CVV +A+E +K V + AG R+++A G
Sbjct: 8 VLSCGSNSFGQLGVPHGPRR---CVVPQAIELHKEKVVCIAAGLRHAVAATASG 58
>MGI|MGI:2444156 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] MGI:MGI:2444156
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 CTD:91433 HOGENOM:HOG000154085 HOVERGEN:HBG061852
OMA:ERPGAWF OrthoDB:EOG41NTMF EMBL:AK030872 EMBL:AK084219
EMBL:AK088662 EMBL:BC069844 IPI:IPI00881984 IPI:IPI00896067
RefSeq:NP_775621.2 UniGene:Mm.474502 ProteinModelPortal:Q8BTU7
SMR:Q8BTU7 PhosphoSite:Q8BTU7 PRIDE:Q8BTU7
Ensembl:ENSMUST00000047362 Ensembl:ENSMUST00000121882 GeneID:269955
KEGG:mmu:269955 UCSC:uc009ial.2 GeneTree:ENSGT00700000104312
InParanoid:Q8BTU7 NextBio:393123 Bgee:Q8BTU7 Genevestigator:Q8BTU7
Uniprot:Q8BTU7
Length = 377
Score = 192 (72.6 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 66/241 (27%), Positives = 112/241 (46%)
Query: 104 GQCGEEPERKDDTGRI----LRRDIVIPQR--C---APKLIVRQVAAGGTHSVVLTREGH 154
GQ +EP R+ G + R V P+ C AP+L VRQ+ G H ++L G
Sbjct: 122 GQGEDEPSRESRMGTLPLLPCARAYVTPEPPFCQPLAPELRVRQLELGAEHVLLLCAAGQ 181
Query: 155 VWTWGQ----PWPPGDIKQISVPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNE 208
V++WG G ++ P ++ L+ +++ +A G +H++ L E G ++ WG NE
Sbjct: 182 VFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNE 241
Query: 209 YGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGD 268
GQL +P + SG + A +T L +DG + G
Sbjct: 242 SGQLA----------LPTR--SG---TENKAEREEATELNEDGLKEELAVADAGAPA--- 283
Query: 269 NDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQ 328
+ + + P ++L G D V SCG H+ +TR G ++++G G +G+LG+ + +
Sbjct: 284 HFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDR 343
Query: 329 P 329
P
Sbjct: 344 P 344
Score = 134 (52.2 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 53/177 (29%), Positives = 79/177 (44%)
Query: 134 LIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNL 193
L + +VAAGG HSV L+ G ++ WG W + Q+++P R G E K A
Sbjct: 213 LRMAKVAAGGWHSVCLSETGDIYIWG--W--NESGQLALPTR-SGTEN-KAEREEATE-- 264
Query: 194 ALQEDGALWAWGNNEYGQLGTGDTQP--RSQPIP-VQGLS-GLTLVDIAAGGWHSTALTD 249
L EDG E G QP P + L G V + G H+ +T
Sbjct: 265 -LNEDGL-----KEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTR 318
Query: 250 DGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCG--GTHSVALTRD 304
GE+Y WG G++G+LG D+ + + + ++ V+CG T+ A+ RD
Sbjct: 319 TGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFVERQLEVRAVTCGPWNTYVYAMERD 375
Score = 79 (32.9 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 16/57 (28%), Positives = 31/57 (54%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDG 57
+ + + +WG+G GQLG G E +++AL+ ++ V AG +S+ + + G
Sbjct: 176 LCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGGWHSVCLSETG 232
>UNIPROTKB|E9PR50 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00983666 ProteinModelPortal:E9PR50 SMR:E9PR50
Ensembl:ENST00000530613 ArrayExpress:E9PR50 Bgee:E9PR50
Uniprot:E9PR50
Length = 165
Score = 171 (65.3 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 55/168 (32%), Positives = 79/168 (47%)
Query: 148 VLTREGHVWT-----WGQPWPPGDIKQISVPVRVQ-GLEQVKLIAVGAFHNLALQEDGAL 201
+LT G V + +GQ P ++ VP ++ E+V IA G H +A G +
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIV 60
Query: 202 WAWGNN--EYGQ-LGTGDTQP----RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVY 254
+ WG G+ L G T P +P V GL + + AG HS +LTD GEVY
Sbjct: 61 FQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVY 120
Query: 255 GWGRGEHGRLGFGDNDKSSKMVPQKV--NLLAGEDIVQVSCGGTHSVA 300
WG +HG+L N+ + VPQK+ + E + + G TH VA
Sbjct: 121 VWGSNKHGQLA---NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVA 165
Score = 129 (50.5 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 44/130 (33%), Positives = 61/130 (46%)
Query: 195 LQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQ-GLSGLTLVDIAAGGWHSTALTDDGEV 253
L E+G + + G+N +GQLG PR +P L +V IAAG H+ A T G V
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHG-PRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIV 60
Query: 254 YGWGRG--EHGR-LGFGDNDKS--SKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIF 308
+ WG G GR L G + P +V L + V G HS +LT G ++
Sbjct: 61 FQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVY 120
Query: 309 SFGRGDHGRL 318
+G HG+L
Sbjct: 121 VWGSNKHGQL 130
Score = 122 (48.0 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 50/171 (29%), Positives = 71/171 (41%)
Query: 91 DQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCA-PKLIVRQVAAGGTHSVVL 149
+ G+ + G N +GQ G P R V+PQ K V +AAG H+V
Sbjct: 4 ENGQVLSCGSNSFGQLGV-PHGP--------RRCVVPQAIELHKEKVVCIAAGLRHAVAA 54
Query: 150 TREGHVWTWGQPWP-------PGDIKQI----SVPVRVQGLEQVKLIAV--GAFHNLALQ 196
T G V+ WG PG + P RV GLE K + V G+ H+ +L
Sbjct: 55 TASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLT 114
Query: 197 EDGALWAWGNNEYGQLGTGDT-QPRSQPIPVQGLSGLTLVDIAAGGWHSTA 246
+ G ++ WG+N++GQL P Q I + I +G H A
Sbjct: 115 DAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVA 165
Score = 96 (38.9 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 61 TENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 109
T PS+V L N+K + G H ++ D G Y WG N++GQ E
Sbjct: 85 TAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANE 133
Score = 63 (27.2 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVV-KALEPYK--VRSVVAGSRNSLAICDDG 57
+++ GS GQLG+ + R CVV +A+E +K V + AG R+++A G
Sbjct: 8 VLSCGSNSFGQLGVPHGPRR---CVVPQAIELHKEKVVCIAAGLRHAVAATASG 58
>ASPGD|ASPL0000040680 [details] [associations]
symbol:AN2874 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] INTERPRO:IPR000408 EMBL:BN001306 EMBL:AACD01000051
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
RefSeq:XP_660478.1 ProteinModelPortal:Q5B9A6
EnsemblFungi:CADANIAT00010215 GeneID:2873908 KEGG:ani:AN2874.2
Uniprot:Q5B9A6
Length = 1365
Score = 144 (55.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 37/116 (31%), Positives = 56/116 (48%)
Query: 200 ALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRG 259
+++ G N GQLG G+ P P + +V +AAGG H ALT D ++Y WG
Sbjct: 905 SVYVLGENGNGQLGMGNGTPVQYKQPTKNTQLPDVVQVAAGGEHCIALTHDNKIYTWGDN 964
Query: 260 EHGRLGFGDNDKSSKMVPQ----KVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFG 311
HG+LG N +++M + +VNL QV + LT G ++ +G
Sbjct: 965 SHGQLGRLTNSMTAQMPGEVDFSEVNLPDYTIFAQVVATRSACFVLTMFGDVYGWG 1020
Score = 137 (53.3 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 45/147 (30%), Positives = 66/147 (44%)
Query: 204 WGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWH---STALTDDG------EVY 254
+ N E G G G+ + S AA G++ ST+L ++ VY
Sbjct: 848 FSNTEVGAPGLGEKRAASPSDAGTNAKRAKPGTPAASGFNRYASTSLVENSVPSRKCSVY 907
Query: 255 GWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGD 314
G +G+LG G+ P K L D+VQV+ GG H +ALT D I+++G
Sbjct: 908 VLGENGNGQLGMGNGTPVQYKQPTKNTQLP--DVVQVAAGGEHCIALTHDNKIYTWGDNS 965
Query: 315 HGRLG-YGRKVTTGQPMEVP---INIP 337
HG+LG +T P EV +N+P
Sbjct: 966 HGQLGRLTNSMTAQMPGEVDFSEVNLP 992
Score = 118 (46.6 bits), Expect = 9.3e-12, Sum P(3) = 9.3e-12
Identities = 42/137 (30%), Positives = 58/137 (42%)
Query: 76 IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE--EPERKDDTGRILRRDIVIPQRCAPK 133
+VQ A GG HC+A+ + Y WG N +GQ G G + ++ +P
Sbjct: 939 VVQVAAGGEHCIALTHDNKIYTWGDNSHGQLGRLTNSMTAQMPGEVDFSEVNLPDYT--- 995
Query: 134 LIVRQVAAGGTHSVVLTREGHVWTWG------------QPWPP-GDIKQIS---VPVRVQ 177
I QV A + VLT G V+ WG Q P G Q P+ +Q
Sbjct: 996 -IFAQVVATRSACFVLTMFGDVYGWGTFSEIYEDENGEQHCEPLGFRHQCKCQRTPLHIQ 1054
Query: 178 GLEQVKLIAVGAFHNLA 194
L+ VK +A G+ H LA
Sbjct: 1055 ELQNVKRLAAGSDHVLA 1071
Score = 106 (42.4 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 31/95 (32%), Positives = 42/95 (44%)
Query: 169 QISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ-PIPVQ 227
Q P + L V +A G H +AL D ++ WG+N +GQLG +Q P V
Sbjct: 926 QYKQPTKNTQLPDVVQVAAGGEHCIALTHDNKIYTWGDNSHGQLGRLTNSMTAQMPGEVD 985
Query: 228 ----GLSGLTL-VDIAAGGWHSTALTDDGEVYGWG 257
L T+ + A LT G+VYGWG
Sbjct: 986 FSEVNLPDYTIFAQVVATRSACFVLTMFGDVYGWG 1020
Score = 95 (38.5 bits), Expect = 9.3e-12, Sum P(3) = 9.3e-12
Identities = 35/117 (29%), Positives = 46/117 (39%)
Query: 180 EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLG----TGDTQPRS----QPIPVQGLSG 231
+ V I G FH+ ++E G AWG N++ Q R +P V L G
Sbjct: 1159 DNVSTIGSGKFHSFVIKESGDFLAWGYNKFAQTAFVPPAASVLRRDLKVDKPSTVASLRG 1218
Query: 232 LTLVDIAAGGWH-STALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGED 287
V GG S ALT G+ WG + G D S + P N +AG D
Sbjct: 1219 QR-VHFPTGGVDFSVALTAGGQCLSWGSFQDGVRSIPDTAMSDE--PD-FNKVAGRD 1271
Score = 95 (38.5 bits), Expect = 4.9e-08, Sum P(3) = 4.9e-08
Identities = 22/83 (26%), Positives = 45/83 (54%)
Query: 170 ISVPVRVQGLEQ----VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQ-PRSQPI 224
+ VP V G+ +K+++ G H +A+ G WG+N++ ++ +T+ P + P+
Sbjct: 1280 MKVPTFVPGINAHDKGIKMVSAGWTHTIAVTNGGKALGWGSNDHYEIHPDETKHPINDPM 1339
Query: 225 PVQGLSGLTLVDIAAGGWHSTAL 247
+ + GL +V+ AAG + + L
Sbjct: 1340 EIP-MEGLRVVEAAAGRFFTILL 1361
Score = 80 (33.2 bits), Expect = 4.9e-08, Sum P(3) = 4.9e-08
Identities = 29/95 (30%), Positives = 38/95 (40%)
Query: 70 ALSNTKIVQA-AIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVI-- 126
AL N V G +H + + G AWG N++ Q P +LRRD+ +
Sbjct: 1154 ALKNPDNVSTIGSGKFHSFVIKESGDFLAWGYNKFAQTAFVPP----AASVLRRDLKVDK 1209
Query: 127 PQRCAPKLIVR-QVAAGGTH-SVVLTREGHVWTWG 159
P A R GG SV LT G +WG
Sbjct: 1210 PSTVASLRGQRVHFPTGGVDFSVALTAGGQCLSWG 1244
Score = 79 (32.9 bits), Expect = 4.9e-08, Sum P(3) = 4.9e-08
Identities = 22/75 (29%), Positives = 35/75 (46%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKT--EN 63
S+ G +GQLG+GN ++ K + V V AG + +A+ D K T +N
Sbjct: 905 SVYVLGENGNGQLGMGNGTPVQYKQPTKNTQLPDVVQVAAGGEHCIALTHDNKIYTWGDN 964
Query: 64 IPSQVNALSNTKIVQ 78
Q+ L+N+ Q
Sbjct: 965 SHGQLGRLTNSMTAQ 979
Score = 76 (31.8 bits), Expect = 9.3e-12, Sum P(3) = 9.3e-12
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 288 IVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGR-KVTTGQPMEVPI 334
I VS G TH++A+T G +G DH + K PME+P+
Sbjct: 1296 IKMVSAGWTHTIAVTNGGKALGWGSNDHYEIHPDETKHPINDPMEIPM 1343
Score = 76 (31.8 bits), Expect = 5.1e-06, Sum P(3) = 5.1e-06
Identities = 17/70 (24%), Positives = 35/70 (50%)
Query: 235 VDIAAGGW-HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSC 293
+ + + GW H+ A+T+ G+ GWG +H + D K P ++ + G +V+ +
Sbjct: 1296 IKMVSAGWTHTIAVTNGGKALGWGSNDHYEI-HPDETKHPINDPMEIPM-EGLRVVEAAA 1353
Query: 294 GGTHSVALTR 303
G ++ L +
Sbjct: 1354 GRFFTILLVQ 1363
>UNIPROTKB|H0YE53 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 Ensembl:ENST00000533241 Uniprot:H0YE53
Length = 144
Score = 163 (62.4 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 46/127 (36%), Positives = 66/127 (51%)
Query: 249 DDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV--NLLAGEDIVQVSCGGTHSVALTRDGH 306
D GEVY WG +HG+L N+ + VPQK+ + E + + G TH VA T G
Sbjct: 2 DAGEVYVWGSNKHGQLA---NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGK 58
Query: 307 IFSFGRGDHGRLGYGRKVTT--GQPME-----VPINIPAPRNAGDGVDRRWIAKLVACGG 359
+F++GR D+G+LG RK+ T G +E +P + P P + A V+CG
Sbjct: 59 MFTWGRADYGQLG--RKLETYEGWKLEKQDSFLPCSRP-PNSMPSSPHCLTGATEVSCGS 115
Query: 360 RHTLAIV 366
H LAI+
Sbjct: 116 EHNLAII 122
Score = 109 (43.4 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 32/120 (26%), Positives = 53/120 (44%)
Query: 199 GALWAWGNNEYGQLGTGDT-QPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWG 257
G ++ WG+N++GQL P Q I + I +G H A T+ G+++ WG
Sbjct: 4 GEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWG 63
Query: 258 RGEHGRLG----------------FGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVAL 301
R ++G+LG F + +P + L G +VSCG H++A+
Sbjct: 64 RADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGA--TEVSCGSEHNLAI 121
>WB|WBGene00017190 [details] [associations]
symbol:F07B7.12 species:6239 "Caenorhabditis elegans"
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR027047
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR012983 Pfam:PF08005 EMBL:FO081059
GeneTree:ENSGT00390000011403 KO:K10693 PANTHER:PTHR12846
eggNOG:NOG240798 RefSeq:NP_505281.1 ProteinModelPortal:Q965Y9
SMR:Q965Y9 STRING:Q965Y9 PaxDb:Q965Y9 EnsemblMetazoa:F07B7.12
GeneID:184118 KEGG:cel:CELE_F07B7.12 UCSC:F07B7.12 CTD:184118
WormBase:F07B7.12 InParanoid:Q965Y9 OMA:KESRITH NextBio:923582
Uniprot:Q965Y9
Length = 1900
Score = 153 (58.9 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 35/98 (35%), Positives = 53/98 (54%)
Query: 221 SQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV 280
S+ I QG + + ++ G +H+ L D V+ +G HG+LG GD SK PQ+V
Sbjct: 756 SRVILSQGPHDVKVSSVSCGNFHTVLLASDRRVFTFGSNCHGQLGVGDT--LSKNTPQQV 813
Query: 281 NLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRL 318
L + IVQV+ G H++ DG +F+FG G+L
Sbjct: 814 ILPSDTVIVQVAAGSNHTILRANDGSVFTFGAFGKGQL 851
Score = 151 (58.2 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 40/115 (34%), Positives = 62/115 (53%)
Query: 173 PVRV---QGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQ 227
P RV QG VK+ +V G FH + L D ++ +G+N +GQLG GDT ++ P V
Sbjct: 755 PSRVILSQGPHDVKVSSVSCGNFHTVLLASDRRVFTFGSNCHGQLGVGDTLSKNTPQQVI 814
Query: 228 GLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSS-KMVPQKVN 281
S +V +AAG H+ +DG V+ +G G+L +K+ +P+KV+
Sbjct: 815 LPSDTVIVQVAAGSNHTILRANDGSVFTFGAFGKGQLARPAGEKAGWNAIPEKVS 869
Score = 114 (45.2 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 27/79 (34%), Positives = 40/79 (50%)
Query: 257 GRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVS---CGGTHSVALTRDGHIFSFGRG 313
GR +H + + S + P +V L G V+VS CG H+V L D +F+FG
Sbjct: 735 GRAQHVQFSSTAAPQRSTLHPSRVILSQGPHDVKVSSVSCGNFHTVLLASDRRVFTFGSN 794
Query: 314 DHGRLGYGRKVTTGQPMEV 332
HG+LG G ++ P +V
Sbjct: 795 CHGQLGVGDTLSKNTPQQV 813
Score = 90 (36.7 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 20/50 (40%), Positives = 25/50 (50%)
Query: 59 TKTENIPSQV-NALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 107
T N+ SQ+ N L N I A+G H +AV G + WG N QCG
Sbjct: 597 TMRVNVSSQMLNGLDNVMISSLALGKSHGVAVTRNGHLFTWGLNNMNQCG 646
Score = 79 (32.9 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 44/158 (27%), Positives = 70/158 (44%)
Query: 100 GNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG 159
G +G ++K + GR LRR ++P + IV A+G + V + G ++ G
Sbjct: 542 GAGHGWIASVDDKKRN-GR-LRR--LVPSN--RRKIVHVCASGHVYGYV-SENGKIFMGG 594
Query: 160 QPWPPGDIKQISVPVRV-QGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGD 216
+++V ++ GL+ V + +A+G H +A+ +G L+ WG N Q G +
Sbjct: 595 L-----HTMRVNVSSQMLNGLDNVMISSLALGKSHGVAVTRNGHLFTWGLNNMNQCGRVE 649
Query: 217 -TQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEV 253
T S P SG I G H T LTD V
Sbjct: 650 STSTTSSPRH----SGRQEYQICPIGEH-TWLTDTPSV 682
Score = 68 (29.0 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 33/138 (23%), Positives = 60/138 (43%)
Query: 130 CAPKLIVRQVAAGGTHSVVLTREGHVW--TWGQPWPPGDIKQISVPVRVQGLEQVKLIAV 187
C P+ IV Q++ G + + GH W + G ++++ VP + + V + A
Sbjct: 522 CLPEPIV-QISVGIDTIMFRSGAGHGWIASVDDKKRNGRLRRL-VPSNRRKI--VHVCAS 577
Query: 188 GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTAL 247
G + + E+G ++ G L T SQ + GL + + +A G H A+
Sbjct: 578 GHVYGY-VSENGKIFMGG------LHTMRVNVSSQML--NGLDNVMISSLALGKSHGVAV 628
Query: 248 TDDGEVYGWGRGEHGRLG 265
T +G ++ WG + G
Sbjct: 629 TRNGHLFTWGLNNMNQCG 646
>FB|FBgn0030600 [details] [associations]
symbol:hiw "highwire" species:7227 "Drosophila melanogaster"
[GO:0008582 "regulation of synaptic growth at neuromuscular
junction" evidence=IMP;TAS] [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0007628 "adult walking behavior"
evidence=NAS] [GO:0040011 "locomotion" evidence=NAS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0030514 "negative regulation
of BMP signaling pathway" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045886 "negative regulation of synaptic
growth at neuromuscular junction" evidence=IMP] [GO:0030509 "BMP
signaling pathway" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0006914 "autophagy" evidence=IDA]
[GO:0050808 "synapse organization" evidence=IDA] InterPro:IPR001841
InterPro:IPR027047 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518
GO:GO:0005886 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 EMBL:AE014298 GO:GO:0008270 GO:GO:0006914
GO:GO:0040011 GO:GO:0050808 GO:GO:0006351 GO:GO:0016023
GO:GO:0045886 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0030509 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
GO:GO:0007628 eggNOG:COG5184 GO:GO:0030514 InterPro:IPR012983
Pfam:PF08005 InterPro:IPR017868 PROSITE:PS50194 EMBL:AF262977
EMBL:AY113376 RefSeq:NP_511159.3 UniGene:Dm.3259
ProteinModelPortal:Q9NB71 SMR:Q9NB71 IntAct:Q9NB71 STRING:Q9NB71
EnsemblMetazoa:FBtr0073970 GeneID:32429 KEGG:dme:Dmel_CG32592
UCSC:CG32592-RA CTD:32429 FlyBase:FBgn0030600
GeneTree:ENSGT00390000011403 InParanoid:Q9NB71 KO:K10693
OMA:DAQCQEY OrthoDB:EOG4ZPC91 PhylomeDB:Q9NB71 ChiTaRS:hiw
GenomeRNAi:32429 NextBio:778423 Bgee:Q9NB71 GermOnline:CG32592
PANTHER:PTHR12846 Uniprot:Q9NB71
Length = 5233
Score = 172 (65.6 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 45/118 (38%), Positives = 66/118 (55%)
Query: 185 IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHS 244
+A G H + L G ++ +G+N+YGQLG+GD QP S P+ VQ + G + +AAG H+
Sbjct: 971 VACGLHHTVVLTLAGEVYTFGSNQYGQLGSGDLQPVSGPVRVQ-VPG-AISQVAAGSNHT 1028
Query: 245 TALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVN--LLAGEDIVQVSCGGTHSVA 300
LT G VY +G + G+LG +D K PQ + + AG D GG+ +VA
Sbjct: 1029 VLLTSKGMVYTFGNYQKGQLGRLPSDYGLKPPPQDDDSPVGAGSD---GGAGGSPTVA 1083
Score = 147 (56.8 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 46/133 (34%), Positives = 65/133 (48%)
Query: 219 PRSQPIPVQGL---SGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKM 275
PR P+ Q L S +V +A G H+ LT GEVY +G ++G+LG GD S
Sbjct: 950 PRVAPLAPQLLQLTSSSPVVQVACGLHHTVVLTLAGEVYTFGSNQYGQLGSGDLQPVSG- 1008
Query: 276 VPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLG-----YGRKVTTGQPM 330
P +V + I QV+ G H+V LT G +++FG G+LG YG K Q
Sbjct: 1009 -PVRVQVPGA--ISQVAAGSNHTVLLTSKGMVYTFGNYQKGQLGRLPSDYGLKPPP-QDD 1064
Query: 331 EVPINIPAPRNAG 343
+ P+ + AG
Sbjct: 1065 DSPVGAGSDGGAG 1077
Score = 120 (47.3 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 268 DNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTG 327
D + + + PQ + L + +VQV+CG H+V LT G +++FG +G+LG G
Sbjct: 948 DPPRVAPLAPQLLQLTSSSPVVQVACGLHHTVVLTLAGEVYTFGSNQYGQLGSGDL---- 1003
Query: 328 QPMEVPINIPAP 339
QP+ P+ + P
Sbjct: 1004 QPVSGPVRVQVP 1015
Score = 103 (41.3 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 43/171 (25%), Positives = 74/171 (43%)
Query: 46 GSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIG--GWHCLAVDDQGRAYAWGGNEY 103
G +L + G+T T + V + + IV A+G G H L V+D G + G
Sbjct: 622 GKSAALGLKCVGRTPTLKLTELVISKA-ANIVHVAVGHDGIHALLVNDDGTVFFAGTARR 680
Query: 104 GQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWP 163
G+ G+ + + + + + + ++V GT S +T+ G + +G+
Sbjct: 681 GEDGDSSKNRRQPKAVKPKKMT---KIDGHVVVHAACNNGT-SAFVTKTGKLIMYGKDTA 736
Query: 164 PGDIKQISVPVRVQGLEQ-VKLIAVGAFHNLALQEDGALWAWGNNEYGQLG 213
D + LEQ V +A+G H +AL G L+++G N GQ G
Sbjct: 737 HCDAMGFVSEL----LEQHVTKVALGKAHCVALNAKGQLFSFGLNNKGQCG 783
Score = 39 (18.8 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 290 QVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTT 326
Q+ C +S + +DGH S GR G G V T
Sbjct: 2161 QLPCILYYSTPMKQDGHSAS------GRTGDGSNVAT 2191
>DICTYBASE|DDB_G0280093 [details] [associations]
symbol:gacGG "RhoGAP domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005096
"GTPase activator activity" evidence=IEA] InterPro:IPR000198
InterPro:IPR008936 Pfam:PF00620 PROSITE:PS50238 SMART:SM00324
dictyBase:DDB_G0280093 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007165 GO:GO:0005096 GO:GO:0043547
Gene3D:1.10.555.10 SUPFAM:SSF48350 GenomeReviews:CM000152_GR
EMBL:AAFI02000035 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HSSP:Q07960 RefSeq:XP_641238.1
ProteinModelPortal:Q54VW7 EnsemblProtists:DDB0233849 GeneID:8622369
KEGG:ddi:DDB_G0280093 InParanoid:Q54VW7 OMA:INSIVEC Uniprot:Q54VW7
Length = 1203
Score = 186 (70.5 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 61/243 (25%), Positives = 105/243 (43%)
Query: 85 HCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGT 144
H LA+ + G Y WG N + Q I D I + P V+ ++ GG
Sbjct: 45 HSLALTETGELYGWGDNRHHQLSSNKA-------ITSIDKPIKIQVIPNQRVKSISCGGN 97
Query: 145 HSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQ------ED 198
S + G ++ WG G K P +V L+ V +++G H + E
Sbjct: 98 FSAAIMENGLLYVWGTLIEGG--KCTESPTKVDLLKGVTCVSIGINHCAVVADSPTTPEK 155
Query: 199 GALWAWGNNEYGQLGT-GDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWG 257
+++ WG N GQLG GD+ + P + G + + G + A+ + EV+ WG
Sbjct: 156 RSVYTWGTNRKGQLGVVGDSITNA---PRRVTLGSKAISVCCGEEFTAAIVEGNEVFVWG 212
Query: 258 RGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHG- 316
+ ++ ++D+ +P K L G DIV++SC + A + G++ +G +
Sbjct: 213 YNKSRQICSNNSDEIIS-IPVKPFL--GRDIVELSCTKNYIAARSGVGNVCVWGSNEQVC 269
Query: 317 RLG 319
R+G
Sbjct: 270 RIG 272
Score = 155 (59.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 53/184 (28%), Positives = 80/184 (43%)
Query: 142 GGTHSVVLTREGHVWTWG-----QPWPPGDIKQISVPVRVQGL--EQVKLIAVGAFHNLA 194
G HS+ LT G ++ WG Q I I P+++Q + ++VK I+ G + A
Sbjct: 42 GYNHSLALTETGELYGWGDNRHHQLSSNKAITSIDKPIKIQVIPNQRVKSISCGGNFSAA 101
Query: 195 LQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDG--- 251
+ E+G L+ WG G T P V L G+T V I H + D
Sbjct: 102 IMENGLLYVWGTLIEGGKCT------ESPTKVDLLKGVTCVSIGIN--HCAVVADSPTTP 153
Query: 252 ---EVYGWGRGEHGRLGF-GDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHI 307
VY WG G+LG GD+ ++ P++V L G + V CG + A+ +
Sbjct: 154 EKRSVYTWGTNRKGQLGVVGDSITNA---PRRVTL--GSKAISVCCGEEFTAAIVEGNEV 208
Query: 308 FSFG 311
F +G
Sbjct: 209 FVWG 212
Score = 137 (53.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 45/156 (28%), Positives = 69/156 (44%)
Query: 188 GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPR-SQPIPVQGLSGLTLVDIAAGGWHSTA 246
G H+LAL E G L+ WG+N + QL + +PI +Q + + I+ GG S A
Sbjct: 42 GYNHSLALTETGELYGWGDNRHHQLSSNKAITSIDKPIKIQVIPNQRVKSISCGGNFSAA 101
Query: 247 LTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVS---CGGTHSVALTR 303
+ ++G +Y WG G G +S P KV+LL G V + C T
Sbjct: 102 IMENGLLYVWGTLIEG----GKCTES----PTKVDLLKGVTCVSIGINHCAVVADSPTTP 153
Query: 304 DGH-IFSFGRGDHGRLGYGRKVTTGQPMEVPINIPA 338
+ ++++G G+LG T P V + A
Sbjct: 154 EKRSVYTWGTNRKGQLGVVGDSITNAPRRVTLGSKA 189
Score = 134 (52.2 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 35/121 (28%), Positives = 62/121 (51%)
Query: 192 NLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGW-HSTALTDD 250
N++L + G L+ WG+ G+ P P+ + + +D G+ HS ALT+
Sbjct: 8 NISLPQ-GVLYCWGDKFSGK-------PTFNPL----IPNICFMD---NGYNHSLALTET 52
Query: 251 GEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSF 310
GE+YGWG H +L + +S P K+ ++ + + +SCGG S A+ +G ++ +
Sbjct: 53 GELYGWGDNRHHQLS-SNKAITSIDKPIKIQVIPNQRVKSISCGGNFSAAIMENGLLYVW 111
Query: 311 G 311
G
Sbjct: 112 G 112
>WB|WBGene00012370 [details] [associations]
symbol:W09G3.7 species:6239 "Caenorhabditis elegans"
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0045132 PRINTS:PR00633
PROSITE:PS50012 EMBL:AL032625 GeneTree:ENSGT00700000104312
EMBL:Z82080 EMBL:AL023854 RefSeq:NP_001021671.2
ProteinModelPortal:G5EEZ1 SMR:G5EEZ1 PRIDE:G5EEZ1
EnsemblMetazoa:W09G3.7a GeneID:173245 KEGG:cel:CELE_W09G3.7
CTD:173245 WormBase:W09G3.7a OMA:RKKVDCA NextBio:878861
Uniprot:G5EEZ1
Length = 404
Score = 179 (68.1 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 68/273 (24%), Positives = 114/273 (41%)
Query: 67 QVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKD-----DTGRIL- 120
++N + +I++ + G H L + G +A G N +GQCG PE D + +L
Sbjct: 116 KIN-IPGDEILEISSGRAHSLIRTNLG-VFAIGDNNFGQCGRNPENMDYVVGSEESPLLP 173
Query: 121 ----RRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWT--WGQPWPPGDIKQISVPV 174
+ +I C+ ++G S L +G +G W P ++
Sbjct: 174 LSFPTSEPIISIHCSMDTSFVVDSSGAVFSFGLNEDGQCGNEAYGIQWEPAKVRG----- 228
Query: 175 RVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLG--TGDTQPRSQPIPVQGLSGL 232
V+G +++ ++ LA E+G ++ WG EYGQ T + Q + L +
Sbjct: 229 DVEG-SKIQKVSGSTDTLLACSENGEIFIWGQTEYGQAAGATDEIQLNTSRHVANSLGPI 287
Query: 233 TLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVN--LLAGEDIVQ 290
VD A G V+ WG G LG G +S K P +++ L G+ +
Sbjct: 288 ICVDSTQSS--VVARNSRGNVFVWGVGV---LGMGPEAESLK-TPTQMDQPLFDGKMVTS 341
Query: 291 VSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRK 323
VS G + A+ DG +F +G + LG G +
Sbjct: 342 VSAGNSCMSAINEDGRLFIWGENRYSSLGLGHQ 374
Score = 136 (52.9 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 56/223 (25%), Positives = 98/223 (43%)
Query: 89 VDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVV 148
VD G +++G NE GQCG E +R D+ K+ Q +G T +++
Sbjct: 195 VDSSGAVFSFGLNEDGQCGNEAYGIQWEPAKVRGDVE-----GSKI---QKVSGSTDTLL 246
Query: 149 LTRE-GHVWTWGQP---WPPGDIKQISVPVRVQGLEQV-KLIAVGAFHN--LALQEDGAL 201
E G ++ WGQ G +I + + +I V + + +A G +
Sbjct: 247 ACSENGEIFIWGQTEYGQAAGATDEIQLNTSRHVANSLGPIICVDSTQSSVVARNSRGNV 306
Query: 202 WAWGNNEYGQLGTG-DTQPRSQPIPV-QGL-SGLTLVDIAAGGWHSTALTDDGEVYGWGR 258
+ WG G LG G + + P + Q L G + ++AG +A+ +DG ++ WG
Sbjct: 307 FVWG---VGVLGMGPEAESLKTPTQMDQPLFDGKMVTSVSAGNSCMSAINEDGRLFIWGE 363
Query: 259 GEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVAL 301
+ LG G + ++ P ++ L G D+ + + G HS+ L
Sbjct: 364 NRYSSLGLGHQKR--QLFPYQL-FLPG-DVRKAALGPDHSLFL 402
>WB|WBGene00004457 [details] [associations]
symbol:rpm-1 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0050807 "regulation of synapse organization" evidence=IGI;IMP]
[GO:0040011 "locomotion" evidence=IGI] [GO:0043409 "negative
regulation of MAPK cascade" evidence=IGI] [GO:0031647 "regulation
of protein stability" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0031594
"neuromuscular junction" evidence=IDA] [GO:0045202 "synapse"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0031435 "mitogen-activated protein kinase kinase
kinase binding" evidence=IPI] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR027047 Pfam:PF00643 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518 GO:GO:0005634
GO:GO:0018991 GO:GO:0006915 GO:GO:0006355 GO:GO:0046872
GO:GO:0030424 GO:GO:0008270 GO:GO:0031594 GO:GO:0010171
GO:GO:0040011 GO:GO:0006351 GO:GO:0031647 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
PROSITE:PS51284 GO:GO:0043409 InterPro:IPR012983 Pfam:PF08005
GO:GO:0050807 GeneTree:ENSGT00390000011403 KO:K10693
PANTHER:PTHR12846 eggNOG:NOG240798 EMBL:FO080217 PIR:T29165
RefSeq:NP_505267.1 ProteinModelPortal:Q17551 SMR:Q17551
STRING:Q17551 PaxDb:Q17551 EnsemblMetazoa:C01B7.6 GeneID:179259
KEGG:cel:CELE_C01B7.6 UCSC:C01B7.6 CTD:179259 WormBase:C01B7.6
HOGENOM:HOG000016145 InParanoid:Q17551 OMA:LLSILHW NextBio:904596
Uniprot:Q17551
Length = 3766
Score = 153 (58.9 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 35/98 (35%), Positives = 53/98 (54%)
Query: 221 SQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV 280
S+ I QG + + ++ G +H+ L D V+ +G HG+LG GD SK PQ+V
Sbjct: 756 SRVILSQGPHDVKVSSVSCGNFHTVLLASDRRVFTFGSNCHGQLGVGDT--LSKNTPQQV 813
Query: 281 NLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRL 318
L + IVQV+ G H++ DG +F+FG G+L
Sbjct: 814 ILPSDTVIVQVAAGSNHTILRANDGSVFTFGAFGKGQL 851
Score = 151 (58.2 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 40/115 (34%), Positives = 62/115 (53%)
Query: 173 PVRV---QGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQ 227
P RV QG VK+ +V G FH + L D ++ +G+N +GQLG GDT ++ P V
Sbjct: 755 PSRVILSQGPHDVKVSSVSCGNFHTVLLASDRRVFTFGSNCHGQLGVGDTLSKNTPQQVI 814
Query: 228 GLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSS-KMVPQKVN 281
S +V +AAG H+ +DG V+ +G G+L +K+ +P+KV+
Sbjct: 815 LPSDTVIVQVAAGSNHTILRANDGSVFTFGAFGKGQLARPAGEKAGWNAIPEKVS 869
Score = 114 (45.2 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 27/79 (34%), Positives = 40/79 (50%)
Query: 257 GRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVS---CGGTHSVALTRDGHIFSFGRG 313
GR +H + + S + P +V L G V+VS CG H+V L D +F+FG
Sbjct: 735 GRAQHVQFSSTAAPQRSTLHPSRVILSQGPHDVKVSSVSCGNFHTVLLASDRRVFTFGSN 794
Query: 314 DHGRLGYGRKVTTGQPMEV 332
HG+LG G ++ P +V
Sbjct: 795 CHGQLGVGDTLSKNTPQQV 813
Score = 90 (36.7 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 20/50 (40%), Positives = 25/50 (50%)
Query: 59 TKTENIPSQV-NALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 107
T N+ SQ+ N L N I A+G H +AV G + WG N QCG
Sbjct: 597 TMRVNVSSQMLNGLDNVMISSLALGKSHGVAVTRNGHLFTWGLNNMNQCG 646
Score = 79 (32.9 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 44/158 (27%), Positives = 70/158 (44%)
Query: 100 GNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG 159
G +G ++K + GR LRR ++P + IV A+G + V + G ++ G
Sbjct: 542 GAGHGWIASVDDKKRN-GR-LRR--LVPSN--RRKIVHVCASGHVYGYV-SENGKIFMGG 594
Query: 160 QPWPPGDIKQISVPVRV-QGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGD 216
+++V ++ GL+ V + +A+G H +A+ +G L+ WG N Q G +
Sbjct: 595 L-----HTMRVNVSSQMLNGLDNVMISSLALGKSHGVAVTRNGHLFTWGLNNMNQCGRVE 649
Query: 217 -TQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEV 253
T S P SG I G H T LTD V
Sbjct: 650 STSTTSSPRH----SGRQEYQICPIGEH-TWLTDTPSV 682
Score = 68 (29.0 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 33/138 (23%), Positives = 60/138 (43%)
Query: 130 CAPKLIVRQVAAGGTHSVVLTREGHVW--TWGQPWPPGDIKQISVPVRVQGLEQVKLIAV 187
C P+ IV Q++ G + + GH W + G ++++ VP + + V + A
Sbjct: 522 CLPEPIV-QISVGIDTIMFRSGAGHGWIASVDDKKRNGRLRRL-VPSNRRKI--VHVCAS 577
Query: 188 GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTAL 247
G + + E+G ++ G L T SQ + GL + + +A G H A+
Sbjct: 578 GHVYGY-VSENGKIFMGG------LHTMRVNVSSQML--NGLDNVMISSLALGKSHGVAV 628
Query: 248 TDDGEVYGWGRGEHGRLG 265
T +G ++ WG + G
Sbjct: 629 TRNGHLFTWGLNNMNQCG 646
>GENEDB_PFALCIPARUM|PFE0420c [details] [associations]
symbol:PFE0420c "guanidine nucleotide exchange
factor, putative" species:5833 "Plasmodium falciparum" [GO:0006323
"DNA packaging" evidence=ISS] [GO:0020011 "apicoplast"
evidence=RCA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 162 (62.1 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 38/127 (29%), Positives = 67/127 (52%)
Query: 186 AVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHST 245
+ G+ H+LA G +++WG G+LG G+ + ++P ++GL ++ + AG HS
Sbjct: 445 SAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSHSG 504
Query: 246 ALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLA-GEDIVQVSCGGTHSVALTRD 304
+ + VY WG G+ +LG G ND P+ V L + + +S G +S+AL
Sbjct: 505 CIDSNYNVYTWGNGKFYKLGHG-NDDIDIYYPKLVECLNHNKKVCMLSFGCFNSLALNVK 563
Query: 305 GHIFSFG 311
G ++ +G
Sbjct: 564 GDVYVWG 570
Score = 146 (56.5 bits), Expect = 2.5e-10, Sum P(3) = 2.5e-10
Identities = 44/147 (29%), Positives = 71/147 (48%)
Query: 178 GLEQVKLI-AVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLV- 235
G+ V + V +N + E G L+ WGN E G++G G + + + ++ + +
Sbjct: 883 GVNNVNNVNGVNGVNNYSSDECGDLYIWGNAESGKVGLGVDYTQGCILLPRKINIINKIY 942
Query: 236 DIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDK---SSKMVPQKVNLLAGEDIVQVS 292
+ G HS LT+ E+Y G +GRLG + K + VP KV L I +
Sbjct: 943 KCSLGNSHSLFLTNTNELYVCGSNNNGRLGLFEKSKMVCNIVSVPTKVILHNNIYIKDIL 1002
Query: 293 CGGTHSVALTRDGHIFSFG---RGDHG 316
G T+S+ L+ DG I+ FG +G +G
Sbjct: 1003 AGNTYSIILSVDGFIYIFGEFIKGSNG 1029
Score = 141 (54.7 bits), Expect = 2.8e-08, Sum P(3) = 2.8e-08
Identities = 31/88 (35%), Positives = 50/88 (56%)
Query: 234 LVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSC 293
++ +AG HS A G++Y WG G +GRLG G N KS PQ + L + I+ V
Sbjct: 441 VIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLG-NIKSYNK-PQLIKGLRNKRILYVCA 498
Query: 294 GGTHSVALTRDGHIFSFGRGDHGRLGYG 321
G +HS + + +++++G G +LG+G
Sbjct: 499 GTSHSGCIDSNYNVYTWGNGKFYKLGHG 526
Score = 140 (54.3 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 43/149 (28%), Positives = 68/149 (45%)
Query: 181 QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAG 240
++K I+ G H LA+ G L++WG N +G +G G Q +P P+ L +
Sbjct: 350 KIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQNVYEPTPIF----LEPHSVDNN 405
Query: 241 GWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVA 300
G ++ DD Y + F + S K +K N+ ++ S G HS+A
Sbjct: 406 GDNND---DD---YDDDNNNNSTYKFHKKEDSIKW-DKKKNV-----VIHCSAGSKHSLA 453
Query: 301 LTRDGHIFSFGRGDHGRLGYGRKVTTGQP 329
G I+S+G G +GRLG G + +P
Sbjct: 454 CNLHGDIYSWGYGGNGRLGLGNIKSYNKP 482
Score = 130 (50.8 bits), Expect = 3.1e-07, Sum P(4) = 3.1e-07
Identities = 37/133 (27%), Positives = 66/133 (49%)
Query: 133 KLIVRQVAAGGTHSVVLTREGHVWTWGQPWPP----GDIKQISVPVRVQGLEQVKLIAV- 187
K +V +AG HS+ G +++WG G+IK + P ++GL +++ V
Sbjct: 438 KNVVIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVC 497
Query: 188 -GAFHNLALQEDGALWAWGNNEYGQLGTG-DTQPRSQPIPVQGLS-GLTLVDIAAGGWHS 244
G H+ + + ++ WGN ++ +LG G D P V+ L+ + ++ G ++S
Sbjct: 498 AGTSHSGCIDSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVECLNHNKKVCMLSFGCFNS 557
Query: 245 TALTDDGEVYGWG 257
AL G+VY WG
Sbjct: 558 LALNVKGDVYVWG 570
Score = 126 (49.4 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 28/97 (28%), Positives = 54/97 (55%)
Query: 228 GLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFG-DNDKSSKMVPQKVNLLAGE 286
G++ + V+ G ++ + + G++Y WG E G++G G D + ++P+K+N++
Sbjct: 883 GVNNVNNVN-GVNGVNNYSSDECGDLYIWGNAESGKVGLGVDYTQGCILLPRKINII--N 939
Query: 287 DIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRK 323
I + S G +HS+ LT ++ G ++GRLG K
Sbjct: 940 KIYKCSLGNSHSLFLTNTNELYVCGSNNNGRLGLFEK 976
Score = 113 (44.8 bits), Expect = 7.6e-07, Sum P(4) = 7.6e-07
Identities = 35/124 (28%), Positives = 64/124 (51%)
Query: 181 QVKLIAVGAFH-NLALQEDGALWAWGNNEYGQLGTGDTQPRSQ-PIPVQ-GLSGLTLVDI 237
+VK+I G+ H ++ L E G ++ G N+ G+LG G+ + + +P+ + ++ I
Sbjct: 753 KVKIID-GSDHFSVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKIIKI 811
Query: 238 AAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTH 297
A G + ++D G VYGWG+ + +LG G + V K NL +++ + G H
Sbjct: 812 ACGYNYVLCVSDVGLVYGWGKNDKSQLGIGVIKDFYEPVHVK-NLT---NVINIFAGYDH 867
Query: 298 SVAL 301
S +
Sbjct: 868 SACI 871
Score = 112 (44.5 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 33/115 (28%), Positives = 58/115 (50%)
Query: 235 VDIAAGGWH-STALTDDGEVYGWGRGEHGRLGFGDNDKSSKM-VPQKVNLLAGEDIVQVS 292
V I G H S L + G+VY G ++G LG G+ + K VP +N+ + I++++
Sbjct: 754 VKIIDGSDHFSVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNK-IIKIA 812
Query: 293 CGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVD 347
CG + + ++ G ++ +G+ D +LG G +P+ V N+ N G D
Sbjct: 813 CGYNYVLCVSDVGLVYGWGKNDKSQLGIGVIKDFYEPVHVK-NLTNVINIFAGYD 866
Score = 103 (41.3 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 50/232 (21%), Positives = 99/232 (42%)
Query: 64 IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRD 123
+P ++N ++ KI + ++G H L + + Y G N G+ G + K ++
Sbjct: 931 LPRKINIIN--KIYKCSLGNSHSLFLTNTNELYVCGSNNNGRLGLFEKSK-----MVCNI 983
Query: 124 IVIPQRCA--PKLIVRQVAAGGTHSVVLTREGHVWTWGQ--PWPPGDIKQISVPV--RVQ 177
+ +P + + ++ + AG T+S++L+ +G ++ +G+ G+ +S V
Sbjct: 984 VSVPTKVILHNNIYIKDILAGNTYSIILSVDGFIYIFGEFIKGSNGNSNNMSCEVISLYN 1043
Query: 178 GLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVD- 236
+ VK + H L D L+ GNN+ Q+ D + + I L L +
Sbjct: 1044 EITNVKYMNGKYEHVFFLTYDNKLFGIGNNKNCQI-LCDNEKENNYIKKPKLITYFLKEN 1102
Query: 237 --IAAG--GWHSTALT--DDGEVYGWG--RGEHGRLGFGDNDKSSKMVPQKV 280
I +H+ ++ E++ WG H +G +N K K P K+
Sbjct: 1103 NKIIESIFSFHNVTFIQFNNSEIFAWGYTNNYHLCIGIPNNIKYLKH-PTKI 1153
Score = 102 (41.0 bits), Expect = 0.00031, Sum P(4) = 0.00031
Identities = 39/140 (27%), Positives = 67/140 (47%)
Query: 133 KLIVR---QVAAGGTH-SVVLTREGHVWTWGQPWPPGDI--------KQISVPVRVQ-GL 179
KL+++ ++ G H SV L G V+T G G++ K+ VP+ + +
Sbjct: 747 KLVLKSKVKIIDGSDHFSVFLLESGKVYTAGYN-KNGELGNGEFNLKKKFGVPILLNICV 805
Query: 180 EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAA 239
++ IA G + L + + G ++ WG N+ QLG G + +P+ V+ L+ + ++I A
Sbjct: 806 NKIIKIACGYNYVLCVSDVGLVYGWGKNDKSQLGIGVIKDFYEPVHVKNLTNV--INIFA 863
Query: 240 GGWHSTA----LTDDGEVYG 255
G HS L D G G
Sbjct: 864 GYDHSACIINKLLDKGNTNG 883
Score = 95 (38.5 bits), Expect = 8.5e-05, Sum P(3) = 8.5e-05
Identities = 39/148 (26%), Positives = 66/148 (44%)
Query: 170 ISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPR-----SQPI 224
I +P ++ + ++ ++G H+L L L+ G+N G+LG + S P
Sbjct: 929 ILLPRKINIINKIYKCSLGNSHSLFLTNTNELYVCGSNNNGRLGLFEKSKMVCNIVSVPT 988
Query: 225 PVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLA 284
V + + + DI AG +S L+ DG +Y +G E + G N S+ M + ++L
Sbjct: 989 KVILHNNIYIKDILAGNTYSIILSVDGFIYIFG--EFIK---GSNGNSNNMSCEVISLYN 1043
Query: 285 GEDIVQVSCGG-THSVALTRDGHIFSFG 311
V+ G H LT D +F G
Sbjct: 1044 EITNVKYMNGKYEHVFFLTYDNKLFGIG 1071
Score = 86 (35.3 bits), Expect = 2.5e-10, Sum P(3) = 2.5e-10
Identities = 28/106 (26%), Positives = 43/106 (40%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDT 116
G K+ N P + L N +I+ G H +D Y WG ++ + G DD
Sbjct: 474 GNIKSYNKPQLIKGLRNKRILYVCAGTSHSGCIDSNYNVYTWGNGKFYKLGHG---NDDI 530
Query: 117 GRILRRDIVIPQ--RCAP-KLIVRQVAAGGTHSVVLTREGHVWTWG 159
DI P+ C V ++ G +S+ L +G V+ WG
Sbjct: 531 ------DIYYPKLVECLNHNKKVCMLSFGCFNSLALNVKGDVYVWG 570
Score = 78 (32.5 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 23/73 (31%), Positives = 31/73 (42%)
Query: 35 LEPYKVRSVVAGSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGR 94
LE KV + L + K +P +N N KI++ A G + L V D G
Sbjct: 768 LESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVN-KIIKIACGYNYVLCVSDVGL 826
Query: 95 AYAWGGNEYGQCG 107
Y WG N+ Q G
Sbjct: 827 VYGWGKNDKSQLG 839
Score = 71 (30.1 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 73 NTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 107
NTKI + G H LA+ G Y+WG N +G G
Sbjct: 348 NTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIG 382
Score = 71 (30.1 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNS 50
I +WG G +G+LG+GN + ++K L ++ V AG+ +S
Sbjct: 460 IYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSHS 503
Score = 49 (22.3 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 6 SIIAWGSGEDGQLGIG-NNEEREWVCVVKALEPYKVRSV 43
SI WG QLG+G NN VV + + V S+
Sbjct: 40 SIFTWGGNSCNQLGLGINNRFVNNPTVVCFFDSFIVASI 78
Score = 43 (20.2 bits), Expect = 3.1e-07, Sum P(4) = 3.1e-07
Identities = 8/33 (24%), Positives = 17/33 (51%)
Query: 295 GTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTG 327
G ++ + G ++ +G + G++G G T G
Sbjct: 895 GVNNYSSDECGDLYIWGNAESGKVGLGVDYTQG 927
Score = 42 (19.8 bits), Expect = 5.1e-06, Sum P(5) = 5.1e-06
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 22 NNEEREWVCV--VKALEPYK---VRSVVAGSRNSLAICDDG 57
N+ + +W +K + P K ++ + G ++LAIC G
Sbjct: 328 NDNKHDWFTPFPMKIVFPKKNTKIKFISCGDMHTLAICTGG 368
Score = 37 (18.1 bits), Expect = 5.1e-06, Sum P(5) = 5.1e-06
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 6 SIIAWGSGEDGQLGIGNNEE 25
S+ ++G G +G LG E
Sbjct: 99 SVYSFGKGNNGLLGYKKKRE 118
>UNIPROTKB|Q8I418 [details] [associations]
symbol:RCC1 "Guanidine nucleotide exchange factor"
species:36329 "Plasmodium falciparum 3D7" [GO:0006323 "DNA
packaging" evidence=ISS] [GO:0020011 "apicoplast" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 162 (62.1 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 38/127 (29%), Positives = 67/127 (52%)
Query: 186 AVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHST 245
+ G+ H+LA G +++WG G+LG G+ + ++P ++GL ++ + AG HS
Sbjct: 445 SAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSHSG 504
Query: 246 ALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLA-GEDIVQVSCGGTHSVALTRD 304
+ + VY WG G+ +LG G ND P+ V L + + +S G +S+AL
Sbjct: 505 CIDSNYNVYTWGNGKFYKLGHG-NDDIDIYYPKLVECLNHNKKVCMLSFGCFNSLALNVK 563
Query: 305 GHIFSFG 311
G ++ +G
Sbjct: 564 GDVYVWG 570
Score = 146 (56.5 bits), Expect = 2.5e-10, Sum P(3) = 2.5e-10
Identities = 44/147 (29%), Positives = 71/147 (48%)
Query: 178 GLEQVKLI-AVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLV- 235
G+ V + V +N + E G L+ WGN E G++G G + + + ++ + +
Sbjct: 883 GVNNVNNVNGVNGVNNYSSDECGDLYIWGNAESGKVGLGVDYTQGCILLPRKINIINKIY 942
Query: 236 DIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDK---SSKMVPQKVNLLAGEDIVQVS 292
+ G HS LT+ E+Y G +GRLG + K + VP KV L I +
Sbjct: 943 KCSLGNSHSLFLTNTNELYVCGSNNNGRLGLFEKSKMVCNIVSVPTKVILHNNIYIKDIL 1002
Query: 293 CGGTHSVALTRDGHIFSFG---RGDHG 316
G T+S+ L+ DG I+ FG +G +G
Sbjct: 1003 AGNTYSIILSVDGFIYIFGEFIKGSNG 1029
Score = 141 (54.7 bits), Expect = 2.8e-08, Sum P(3) = 2.8e-08
Identities = 31/88 (35%), Positives = 50/88 (56%)
Query: 234 LVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSC 293
++ +AG HS A G++Y WG G +GRLG G N KS PQ + L + I+ V
Sbjct: 441 VIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLG-NIKSYNK-PQLIKGLRNKRILYVCA 498
Query: 294 GGTHSVALTRDGHIFSFGRGDHGRLGYG 321
G +HS + + +++++G G +LG+G
Sbjct: 499 GTSHSGCIDSNYNVYTWGNGKFYKLGHG 526
Score = 140 (54.3 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 43/149 (28%), Positives = 68/149 (45%)
Query: 181 QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAG 240
++K I+ G H LA+ G L++WG N +G +G G Q +P P+ L +
Sbjct: 350 KIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQNVYEPTPIF----LEPHSVDNN 405
Query: 241 GWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVA 300
G ++ DD Y + F + S K +K N+ ++ S G HS+A
Sbjct: 406 GDNND---DD---YDDDNNNNSTYKFHKKEDSIKW-DKKKNV-----VIHCSAGSKHSLA 453
Query: 301 LTRDGHIFSFGRGDHGRLGYGRKVTTGQP 329
G I+S+G G +GRLG G + +P
Sbjct: 454 CNLHGDIYSWGYGGNGRLGLGNIKSYNKP 482
Score = 130 (50.8 bits), Expect = 3.1e-07, Sum P(4) = 3.1e-07
Identities = 37/133 (27%), Positives = 66/133 (49%)
Query: 133 KLIVRQVAAGGTHSVVLTREGHVWTWGQPWPP----GDIKQISVPVRVQGLEQVKLIAV- 187
K +V +AG HS+ G +++WG G+IK + P ++GL +++ V
Sbjct: 438 KNVVIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVC 497
Query: 188 -GAFHNLALQEDGALWAWGNNEYGQLGTG-DTQPRSQPIPVQGLS-GLTLVDIAAGGWHS 244
G H+ + + ++ WGN ++ +LG G D P V+ L+ + ++ G ++S
Sbjct: 498 AGTSHSGCIDSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVECLNHNKKVCMLSFGCFNS 557
Query: 245 TALTDDGEVYGWG 257
AL G+VY WG
Sbjct: 558 LALNVKGDVYVWG 570
Score = 126 (49.4 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 28/97 (28%), Positives = 54/97 (55%)
Query: 228 GLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFG-DNDKSSKMVPQKVNLLAGE 286
G++ + V+ G ++ + + G++Y WG E G++G G D + ++P+K+N++
Sbjct: 883 GVNNVNNVN-GVNGVNNYSSDECGDLYIWGNAESGKVGLGVDYTQGCILLPRKINII--N 939
Query: 287 DIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRK 323
I + S G +HS+ LT ++ G ++GRLG K
Sbjct: 940 KIYKCSLGNSHSLFLTNTNELYVCGSNNNGRLGLFEK 976
Score = 113 (44.8 bits), Expect = 7.6e-07, Sum P(4) = 7.6e-07
Identities = 35/124 (28%), Positives = 64/124 (51%)
Query: 181 QVKLIAVGAFH-NLALQEDGALWAWGNNEYGQLGTGDTQPRSQ-PIPVQ-GLSGLTLVDI 237
+VK+I G+ H ++ L E G ++ G N+ G+LG G+ + + +P+ + ++ I
Sbjct: 753 KVKIID-GSDHFSVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKIIKI 811
Query: 238 AAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTH 297
A G + ++D G VYGWG+ + +LG G + V K NL +++ + G H
Sbjct: 812 ACGYNYVLCVSDVGLVYGWGKNDKSQLGIGVIKDFYEPVHVK-NLT---NVINIFAGYDH 867
Query: 298 SVAL 301
S +
Sbjct: 868 SACI 871
Score = 112 (44.5 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 33/115 (28%), Positives = 58/115 (50%)
Query: 235 VDIAAGGWH-STALTDDGEVYGWGRGEHGRLGFGDNDKSSKM-VPQKVNLLAGEDIVQVS 292
V I G H S L + G+VY G ++G LG G+ + K VP +N+ + I++++
Sbjct: 754 VKIIDGSDHFSVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNK-IIKIA 812
Query: 293 CGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVD 347
CG + + ++ G ++ +G+ D +LG G +P+ V N+ N G D
Sbjct: 813 CGYNYVLCVSDVGLVYGWGKNDKSQLGIGVIKDFYEPVHVK-NLTNVINIFAGYD 866
Score = 103 (41.3 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 50/232 (21%), Positives = 99/232 (42%)
Query: 64 IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRD 123
+P ++N ++ KI + ++G H L + + Y G N G+ G + K ++
Sbjct: 931 LPRKINIIN--KIYKCSLGNSHSLFLTNTNELYVCGSNNNGRLGLFEKSK-----MVCNI 983
Query: 124 IVIPQRCA--PKLIVRQVAAGGTHSVVLTREGHVWTWGQ--PWPPGDIKQISVPV--RVQ 177
+ +P + + ++ + AG T+S++L+ +G ++ +G+ G+ +S V
Sbjct: 984 VSVPTKVILHNNIYIKDILAGNTYSIILSVDGFIYIFGEFIKGSNGNSNNMSCEVISLYN 1043
Query: 178 GLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVD- 236
+ VK + H L D L+ GNN+ Q+ D + + I L L +
Sbjct: 1044 EITNVKYMNGKYEHVFFLTYDNKLFGIGNNKNCQI-LCDNEKENNYIKKPKLITYFLKEN 1102
Query: 237 --IAAG--GWHSTALT--DDGEVYGWG--RGEHGRLGFGDNDKSSKMVPQKV 280
I +H+ ++ E++ WG H +G +N K K P K+
Sbjct: 1103 NKIIESIFSFHNVTFIQFNNSEIFAWGYTNNYHLCIGIPNNIKYLKH-PTKI 1153
Score = 102 (41.0 bits), Expect = 0.00031, Sum P(4) = 0.00031
Identities = 39/140 (27%), Positives = 67/140 (47%)
Query: 133 KLIVR---QVAAGGTH-SVVLTREGHVWTWGQPWPPGDI--------KQISVPVRVQ-GL 179
KL+++ ++ G H SV L G V+T G G++ K+ VP+ + +
Sbjct: 747 KLVLKSKVKIIDGSDHFSVFLLESGKVYTAGYN-KNGELGNGEFNLKKKFGVPILLNICV 805
Query: 180 EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAA 239
++ IA G + L + + G ++ WG N+ QLG G + +P+ V+ L+ + ++I A
Sbjct: 806 NKIIKIACGYNYVLCVSDVGLVYGWGKNDKSQLGIGVIKDFYEPVHVKNLTNV--INIFA 863
Query: 240 GGWHSTA----LTDDGEVYG 255
G HS L D G G
Sbjct: 864 GYDHSACIINKLLDKGNTNG 883
Score = 95 (38.5 bits), Expect = 8.5e-05, Sum P(3) = 8.5e-05
Identities = 39/148 (26%), Positives = 66/148 (44%)
Query: 170 ISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPR-----SQPI 224
I +P ++ + ++ ++G H+L L L+ G+N G+LG + S P
Sbjct: 929 ILLPRKINIINKIYKCSLGNSHSLFLTNTNELYVCGSNNNGRLGLFEKSKMVCNIVSVPT 988
Query: 225 PVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLA 284
V + + + DI AG +S L+ DG +Y +G E + G N S+ M + ++L
Sbjct: 989 KVILHNNIYIKDILAGNTYSIILSVDGFIYIFG--EFIK---GSNGNSNNMSCEVISLYN 1043
Query: 285 GEDIVQVSCGG-THSVALTRDGHIFSFG 311
V+ G H LT D +F G
Sbjct: 1044 EITNVKYMNGKYEHVFFLTYDNKLFGIG 1071
Score = 86 (35.3 bits), Expect = 2.5e-10, Sum P(3) = 2.5e-10
Identities = 28/106 (26%), Positives = 43/106 (40%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDT 116
G K+ N P + L N +I+ G H +D Y WG ++ + G DD
Sbjct: 474 GNIKSYNKPQLIKGLRNKRILYVCAGTSHSGCIDSNYNVYTWGNGKFYKLGHG---NDDI 530
Query: 117 GRILRRDIVIPQ--RCAP-KLIVRQVAAGGTHSVVLTREGHVWTWG 159
DI P+ C V ++ G +S+ L +G V+ WG
Sbjct: 531 ------DIYYPKLVECLNHNKKVCMLSFGCFNSLALNVKGDVYVWG 570
Score = 78 (32.5 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 23/73 (31%), Positives = 31/73 (42%)
Query: 35 LEPYKVRSVVAGSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGR 94
LE KV + L + K +P +N N KI++ A G + L V D G
Sbjct: 768 LESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVN-KIIKIACGYNYVLCVSDVGL 826
Query: 95 AYAWGGNEYGQCG 107
Y WG N+ Q G
Sbjct: 827 VYGWGKNDKSQLG 839
Score = 71 (30.1 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 73 NTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 107
NTKI + G H LA+ G Y+WG N +G G
Sbjct: 348 NTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIG 382
Score = 71 (30.1 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNS 50
I +WG G +G+LG+GN + ++K L ++ V AG+ +S
Sbjct: 460 IYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSHS 503
Score = 49 (22.3 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 6 SIIAWGSGEDGQLGIG-NNEEREWVCVVKALEPYKVRSV 43
SI WG QLG+G NN VV + + V S+
Sbjct: 40 SIFTWGGNSCNQLGLGINNRFVNNPTVVCFFDSFIVASI 78
Score = 43 (20.2 bits), Expect = 3.1e-07, Sum P(4) = 3.1e-07
Identities = 8/33 (24%), Positives = 17/33 (51%)
Query: 295 GTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTG 327
G ++ + G ++ +G + G++G G T G
Sbjct: 895 GVNNYSSDECGDLYIWGNAESGKVGLGVDYTQG 927
Score = 42 (19.8 bits), Expect = 5.1e-06, Sum P(5) = 5.1e-06
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 22 NNEEREWVCV--VKALEPYK---VRSVVAGSRNSLAICDDG 57
N+ + +W +K + P K ++ + G ++LAIC G
Sbjct: 328 NDNKHDWFTPFPMKIVFPKKNTKIKFISCGDMHTLAICTGG 368
Score = 37 (18.1 bits), Expect = 5.1e-06, Sum P(5) = 5.1e-06
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 6 SIIAWGSGEDGQLGIGNNEE 25
S+ ++G G +G LG E
Sbjct: 99 SVYSFGKGNNGLLGYKKKRE 118
>FB|FBgn0000247 [details] [associations]
symbol:ca "claret" species:7227 "Drosophila melanogaster"
[GO:0006727 "ommochrome biosynthetic process" evidence=IMP]
[GO:0006856 "eye pigment precursor transport" evidence=TAS]
[GO:0017137 "Rab GTPase binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IDA] [GO:0008057 "eye pigment granule
organization" evidence=IMP] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IPI] [GO:0017112 "Rab guanyl-nucleotide
exchange factor activity" evidence=IPI] [GO:0060967 "negative
regulation of gene silencing by RNA" evidence=IMP]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0008057
GO:GO:0060967 GO:GO:0006727 GO:GO:0006856
GeneTree:ENSGT00700000104208 FlyBase:FBgn0000247 EMBL:BT057978
RefSeq:NP_733309.3 UniGene:Dm.6851 SMR:Q9VAG5 MINT:MINT-1644098
STRING:Q9VAG5 EnsemblMetazoa:FBtr0085484 GeneID:43518
KEGG:dme:Dmel_CG31037 UCSC:CG31037-RA CTD:43518 InParanoid:Q9VAG5
OMA:DNTLHIV GenomeRNAi:43518 NextBio:834351 Uniprot:Q9VAG5
Length = 1961
Score = 191 (72.3 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 58/176 (32%), Positives = 85/176 (48%)
Query: 181 QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTG-DTQPRSQPIPVQGLSGLTLVDIAA 239
QV I G H L L +G L++ GNN QLG G Q QP+ V L G+ + + A
Sbjct: 1174 QVHAIKCGRQHTLILTNNG-LYSLGNNNLCQLGIGRHMQMALQPMLVTALDGMNITMLEA 1232
Query: 240 GGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSV 299
G +H+ A+ D G++Y WG G +G+LG G + + PQ V+ + I+Q+S G H++
Sbjct: 1233 GQYHNAAVAD-GKLYMWGWGIYGQLGQGSCENIA--TPQLVSFFKFKKILQISLGHAHTL 1289
Query: 300 AL--TRDGH---------IFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGD 344
L + H +F FG G+LG G G + N+P GD
Sbjct: 1290 VLCGAPNSHMEANHCGNELFVFGSNHFGQLGTGNS-DHG---DTKTNLPVRLEVGD 1341
Score = 148 (57.2 bits), Expect = 4.8e-05, Sum P(3) = 4.8e-05
Identities = 67/287 (23%), Positives = 120/287 (41%)
Query: 70 ALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGN---EYGQCGEEPERKDDTGRILRRDIVI 126
A+ +++ + G +C V D G AY WG + Y + E + + D+ +
Sbjct: 1111 AIESSRFKPISAGCAYCACVVD-GTAYFWGSSGIPSYYSAQKSTEPPEPAHAVKSLDL-L 1168
Query: 127 PQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISV-PVRVQGLE- 180
Q L V + G H+++LT G +++ G G Q+++ P+ V L+
Sbjct: 1169 SQL---NLQVHAIKCGRQHTLILTNNG-LYSLGNNNLCQLGIGRHMQMALQPMLVTALDG 1224
Query: 181 -QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAA 239
+ ++ G +HN A+ DG L+ WG YGQLG G + + P V ++ I+
Sbjct: 1225 MNITMLEAGQYHNAAVA-DGKLYMWGWGIYGQLGQGSCENIATPQLVSFFKFKKILQISL 1283
Query: 240 GGWHSTALTD-----------DGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDI 288
G H+ L E++ +G G+LG G++D V L G+
Sbjct: 1284 GHAHTLVLCGAPNSHMEANHCGNELFVFGSNHFGQLGTGNSDHGDTKTNLPVRLEVGDCS 1343
Query: 289 VQ-VSCGGTHSVALTRDGHIFSFGRGDHG-RLG--YGRKVTTGQPME 331
++ + ++A+ +F++G RL R+ Q ME
Sbjct: 1344 LRLIHTKFFTNLAVDEQDRLFTWGSSPQALRLANQIKRRANAKQKME 1390
Score = 38 (18.4 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 21 GNNEEREWVCVVKALEPYKVRSVVAGS 47
G +E+R+++C+V +R + A S
Sbjct: 32 GLDEKRQFLCLVSEENEILLRYISAAS 58
Score = 38 (18.4 bits), Expect = 4.8e-05, Sum P(3) = 4.8e-05
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 328 QPMEVP--INIPAPR 340
Q +EVP IN+P PR
Sbjct: 1615 QCVEVPVEINLPRPR 1629
>WB|WBGene00004304 [details] [associations]
symbol:ran-3 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0051301 "cell division" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0009792 GO:GO:0040010
GO:GO:0007067 GO:GO:0007052 GO:GO:0002119 GO:GO:0016246
GO:GO:0000910 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 GO:GO:0040035 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 EMBL:Z54327
GeneTree:ENSGT00700000104160 PIR:T19483 RefSeq:NP_495753.1
ProteinModelPortal:Q18211 SMR:Q18211 IntAct:Q18211 STRING:Q18211
PaxDb:Q18211 EnsemblMetazoa:C26D10.1.1 EnsemblMetazoa:C26D10.1.2
GeneID:174332 KEGG:cel:CELE_C26D10.1 UCSC:C26D10.1 CTD:174332
WormBase:C26D10.1 HOGENOM:HOG000016067 InParanoid:Q18211
OMA:TEPNDVE NextBio:883582 Uniprot:Q18211
Length = 569
Score = 135 (52.6 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 50/175 (28%), Positives = 76/175 (43%)
Query: 52 AICDDGKTKTENIPSQVNALSNT--KIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQC-GE 108
A+ G+T T+ P +V+ K +QA GG H + +G Y G NE G E
Sbjct: 162 ALGHPGRTTTKK-PRKVDIFEEEGLKPLQAVAGGVHSAVLTSEGEVYMCGINEKGTVPAE 220
Query: 109 EPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPP-GDI 167
E++ T + K+++ +AAG + + LT +G V WG G++
Sbjct: 221 GVEKEGSTDEFAKVKFEEDIEKEGKIVM--LAAGASFTAALTDQGSVIAWGNLRNSNGNV 278
Query: 168 -------KQISVPVRV--QGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLG 213
K PV + Q ++ IA G H + L E G L +G+ E GQLG
Sbjct: 279 DVHPLLHKMQEAPVVIVHQAKRKIVKIAAGENHLVMLDEKGCLLTFGDGEMGQLG 333
Score = 135 (52.6 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 44/159 (27%), Positives = 73/159 (45%)
Query: 177 QGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQL---GT---GDTQPRSQPIPVQGLS 230
+GL+ ++ +A G H+ L +G ++ G NE G + G G T ++ + +
Sbjct: 183 EGLKPLQAVA-GGVHSAVLTSEGEVYMCGINEKGTVPAEGVEKEGSTDEFAKVKFEEDIE 241
Query: 231 GL-TLVDIAAGGWHSTALTDDGEVYGWG--RGEHGRLGFGDNDKSSKMVPQKVNLLAGED 287
+V +AAG + ALTD G V WG R +G + + P + A
Sbjct: 242 KEGKIVMLAAGASFTAALTDQGSVIAWGNLRNSNGNVDVHPLLHKMQEAPVVIVHQAKRK 301
Query: 288 IVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTT 326
IV+++ G H V L G + +FG G+ G+LG + T
Sbjct: 302 IVKIAAGENHLVMLDEKGCLLTFGDGEMGQLGRSSRTKT 340
Score = 119 (46.9 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 39/136 (28%), Positives = 62/136 (45%)
Query: 178 GLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTG-----DTQPRSQPIPVQGLS-G 231
G E+ + G H + L DG ++A G N LG G D Q +Q +
Sbjct: 432 GAERTFVNIEGVQHVVILGSDGKVFAMGKNTDNALGLGNWTGKDDQQHWLYDTIQEIEFD 491
Query: 232 LTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMV--PQKVNL--LAGED 287
+V ++A S A ++DG Y WG G+LG G D+ KMV P++++ L G
Sbjct: 492 SKIVGVSAKLATSIAWSEDGTAYAWGFDTTGQLGLGLKDEDEKMVSKPEEISSAHLDGYS 551
Query: 288 IVQVSCGGTHSVALTR 303
I+ S H++ + +
Sbjct: 552 IIGASISDQHTLIIAK 567
Score = 85 (35.0 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 28/95 (29%), Positives = 43/95 (45%)
Query: 233 TLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGD---NDKSSKMVPQKVNLLAGED-I 288
T V+I G H L DG+V+ G+ LG G+ D + + + + I
Sbjct: 436 TFVNIE-GVQHVVILGSDGKVFAMGKNTDNALGLGNWTGKDDQQHWLYDTIQEIEFDSKI 494
Query: 289 VQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRK 323
V VS S+A + DG +++G G+LG G K
Sbjct: 495 VGVSAKLATSIAWSEDGTAYAWGFDTTGQLGLGLK 529
Score = 78 (32.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 25/109 (22%), Positives = 48/109 (44%)
Query: 60 KTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRI 119
K + P + + KIV+ A G H + +D++G +G E GQ G K +
Sbjct: 286 KMQEAPVVIVHQAKRKIVKIAAGENHLVMLDEKGCLLTFGDGEMGQLGRSSRTKTIRSKY 345
Query: 120 LRRD----IVIPQRCAPK-----LIVRQVAAGGTHSVVLTREGHVWTWG 159
+ + +++P R K ++ + V A G ++V +G + +G
Sbjct: 346 MCDESGDHLLVPLRFKHKGKFFDVVAKNVFASGFWTIVHGEDGKYYAFG 394
Score = 72 (30.4 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 25/98 (25%), Positives = 41/98 (41%)
Query: 236 DIAAGGWHSTALTDDGEVYGWGRGEHGRLGF-------G----DNDKSSKMVPQKVNLLA 284
++ A G+ + +DG+ Y +G + +LG G DN + +P +
Sbjct: 373 NVFASGFWTIVHGEDGKYYAFGLNNYAQLGIKVDEADVGQDGQDNRELRVFLPAEAPAFG 432
Query: 285 GE-DIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYG 321
E V + G H V L DG +F+ G+ LG G
Sbjct: 433 AERTFVNIE-GVQHVVILGSDGKVFAMGKNTDNALGLG 469
>MGI|MGI:1918677 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10090 "Mus musculus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 MGI:MGI:1918677
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0016020 GO:GO:0051209 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 EMBL:CH466522
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0030292 CTD:25998 HOVERGEN:HBG081779 OMA:VSALHHK
OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK EMBL:BC137798 EMBL:AK030895
EMBL:AK077387 EMBL:AK129353 IPI:IPI00660767 IPI:IPI00750982
RefSeq:NP_001074751.1 UniGene:Mm.22315 UniGene:Mm.487092
ProteinModelPortal:Q6ZPR6 SMR:Q6ZPR6 PhosphoSite:Q6ZPR6
PaxDb:Q6ZPR6 PRIDE:Q6ZPR6 Ensembl:ENSMUST00000039213 GeneID:108837
KEGG:mmu:108837 GeneTree:ENSGT00700000104160 HOGENOM:HOG000090207
InParanoid:Q6ZPR6 NextBio:361375 Bgee:Q6ZPR6 Genevestigator:Q6ZPR6
Uniprot:Q6ZPR6
Length = 1352
Score = 179 (68.1 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 48/141 (34%), Positives = 74/141 (52%)
Query: 182 VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGG 241
VK + + FH++ L + G ++ G+ G+LG GD Q P V+GLSG +AA
Sbjct: 179 VKQVVLCKFHSVFLSQKGQVYTCGHGRGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAK 238
Query: 242 WHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNL--LAGEDIVQVSCGGTHSV 299
H+ LTDDG VY +G +LG S VP+++ L G I+ V+ G H+V
Sbjct: 239 DHTVVLTDDGCVYTFGLNMFHQLGIIPPPASCN-VPRQIQAKYLKGRTIIGVAAGRFHTV 297
Query: 300 ALTRDGHIFSFGRGDHGRLGY 320
TR+ +++ G G+LG+
Sbjct: 298 LWTREA-VYTLGLNG-GQLGH 316
Score = 170 (64.9 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 40/121 (33%), Positives = 64/121 (52%)
Query: 201 LWAWGNNEYGQLGTGDTQPRSQP--IPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGR 258
++ WG+N LG G + P + + SG+ + + +HS L+ G+VY G
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELLDLFSRSGVYVKQVVLCKFHSVFLSQKGQVYTCGH 203
Query: 259 GEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRL 318
G GRLG GD + + +VP+ V L+G + QV+ H+V LT DG +++FG +L
Sbjct: 204 GRGGRLGHGD--EQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTDDGCVYTFGLNMFHQL 261
Query: 319 G 319
G
Sbjct: 262 G 262
Score = 166 (63.5 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 71/241 (29%), Positives = 106/241 (43%)
Query: 85 HCLAVD-DQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGG 143
H + D D Y WG N G + +L D+ R + V+QV
Sbjct: 133 HVVFKDTDPTEVYTWGDNTNFTLGHGSQNSKHHPELL--DLF--SRSG--VYVKQVVLCK 186
Query: 144 THSVVLTREGHVWTWGQP----WPPGDIKQISVPVRVQGLE--QVKLIAVGAFHNLALQE 197
HSV L+++G V+T G GD + VP V+GL +A H + L +
Sbjct: 187 FHSVFLSQKGQVYTCGHGRGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTD 246
Query: 198 DGALWAWGNNEYGQLGTGDTQPRSQPIP--VQG--LSGLTLVDIAAGGWHSTALTDDGEV 253
DG ++ +G N + QLG P S +P +Q L G T++ +AAG +H+ T + V
Sbjct: 247 DGCVYTFGLNMFHQLGI-IPPPASCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-V 304
Query: 254 Y--GWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDI----VQVSCGGTHSVALTRDGHI 307
Y G G+ G L N + P++V+ L +DI V S G T V +T G I
Sbjct: 305 YTLGLNGGQLGHL-LDPNGEKCVTTPRQVSALHHKDIAVSLVAASDGAT--VCVTTRGDI 361
Query: 308 F 308
+
Sbjct: 362 Y 362
>UNIPROTKB|F1MMV0 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:DAAA02025482 EMBL:DAAA02025483
IPI:IPI00708608 Ensembl:ENSBTAT00000038116 Uniprot:F1MMV0
Length = 1353
Score = 178 (67.7 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 53/158 (33%), Positives = 81/158 (51%)
Query: 182 VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGG 241
+K + + FH++ L + G ++ G+ G+LG GD Q P V+GLSG +AA
Sbjct: 179 IKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAK 238
Query: 242 WHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNL--LAGEDIVQVSCGGTHSV 299
H+ LT+DG VY +G +LG SS VP+++ L G I+ V+ G H+V
Sbjct: 239 DHTVVLTEDGCVYTFGLNIFHQLGLIP-PPSSCNVPRQMQAKYLKGRTIIGVAAGRFHTV 297
Query: 300 ALTRDGHIFSFGRGDHGRLGY-----GRKVTTGQPMEV 332
TR+ +++ G G+LGY G K T P +V
Sbjct: 298 LWTREA-VYTMGLNG-GQLGYLLDPNGEKCVTA-PRQV 332
Score = 174 (66.3 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 40/121 (33%), Positives = 64/121 (52%)
Query: 201 LWAWGNNEYGQLGTGDTQPRSQP--IPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGR 258
++ WG+N LG G + P + + SG+ + + +HS L+ G+VY G
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGH 203
Query: 259 GEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRL 318
G GRLG GD + + +VP+ V L+G + QV+ H+V LT DG +++FG +L
Sbjct: 204 GPGGRLGHGD--EQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQL 261
Query: 319 G 319
G
Sbjct: 262 G 262
>WB|WBGene00021461 [details] [associations]
symbol:nekl-1 species:6239 "Caenorhabditis elegans"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004713 "protein tyrosine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 EMBL:FO081209
KO:K08857 GeneTree:ENSGT00700000104137 RefSeq:NP_490968.2
ProteinModelPortal:Q6AW07 SMR:Q6AW07 EnsemblMetazoa:Y39G10AR.3
GeneID:189769 KEGG:cel:CELE_Y39G10AR.3 UCSC:Y39G10AR.3 CTD:189769
WormBase:Y39G10AR.3 HOGENOM:HOG000017263 InParanoid:Q6AW07
OMA:RNDNTEL NextBio:943564 Uniprot:Q6AW07
Length = 998
Score = 168 (64.2 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 40/138 (28%), Positives = 63/138 (45%)
Query: 182 VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGG 241
+K +A+ H + L D L+ +G+N GQLG G V+ L G + + G
Sbjct: 469 IKQVALSKTHTMVLTNDNELFGFGDNSCGQLGFGKFSKMENGRLVESLKGRDIQSVGVGN 528
Query: 242 WHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVAL 301
+ S D G + +G ++ LG G + K S P + L E+I + CG H VA+
Sbjct: 529 YFSVICCDRGTLLTFGTAKN--LGLGKDAKDSAK-PMLLEQLLRENIKDIYCGHDHVVAV 585
Query: 302 TRDGHIFSFGRGDHGRLG 319
G +G +G+LG
Sbjct: 586 LESGECLGWGSNQYGQLG 603
Score = 140 (54.3 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 68/257 (26%), Positives = 108/257 (42%)
Query: 32 VKALEPYKVRSV-VAGS-RNSLAICD--DGKTKTENIPSQVNALSNTKIVQAAIGGWHCL 87
+K L P + R +GS R+S++ D T + S + S I Q A+ H +
Sbjct: 421 LKMLRPSENRHRHTSGSMRSSVSFTTLYDLHVPTITLSSIPDLPSRISIKQVALSKTHTM 480
Query: 88 AVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSV 147
+ + + +G N GQ G K + GR++ + R ++ V G SV
Sbjct: 481 VLTNDNELFGFGDNSCGQLGFGKFSKMENGRLVES---LKGRD-----IQSVGVGNYFSV 532
Query: 148 VLTREGHVWTWGQPWPPG---DIKQISVPVRVQGL--EQVKLIAVGAFHNLALQEDGALW 202
+ G + T+G G D K + P+ ++ L E +K I G H +A+ E G
Sbjct: 533 ICCDRGTLLTFGTAKNLGLGKDAKDSAKPMLLEQLLRENIKDIYCGHDHVVAVLESGECL 592
Query: 203 AWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLV------------DIAAG--GWHSTAL- 247
WG+N+YGQLG + P V L+ T + I G G +T L
Sbjct: 593 GWGSNQYGQLGLPTLEHFFAPTKVFFLNEATALYGPFQIPMPSNKKIVYGKAGKDATMLL 652
Query: 248 TDDGEVYGWGRGEHGRL 264
+DDG + G +H +L
Sbjct: 653 SDDGSLIAMGSNKHNKL 669
Score = 123 (48.4 bits), Expect = 0.00035, P = 0.00035
Identities = 37/157 (23%), Positives = 74/157 (47%)
Query: 182 VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTG-DTQPRSQPIPVQGLSGLTLVDIAAG 240
++ + VG + ++ + G L +G + LG G D + ++P+ ++ L + DI G
Sbjct: 521 IQSVGVGNYFSVICCDRGTLLTFGTAK--NLGLGKDAKDSAKPMLLEQLLRENIKDIYCG 578
Query: 241 GWHSTALTDDGEVYGWGRGEHGRLG-------------FGDNDKSSKMVPQKVNLLAGED 287
H A+ + GE GWG ++G+LG F N+ ++ P ++ + + +
Sbjct: 579 HDHVVAVLESGECLGWGSNQYGQLGLPTLEHFFAPTKVFFLNEATALYGPFQIPMPSNKK 638
Query: 288 IVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKV 324
IV G ++ L+ DG + + G H +L ++V
Sbjct: 639 IVYGKAGKDATMLLSDDGSLIAMGSNKHNKLNLTQRV 675
Score = 122 (48.0 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 35/134 (26%), Positives = 66/134 (49%)
Query: 193 LALQEDGALWAWGNNEYGQLG--------TGDTQ-PR---SQPIPVQGLSGLTLVDIAAG 240
+ L +DG+L A G+N++ +L T + + P ++P +QG +VD + G
Sbjct: 650 MLLSDDGSLIAMGSNKHNKLNLTQRVGFFTKEKKTPNDYVNKPTILQGFPE-RVVDFSVG 708
Query: 241 GWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVA 300
+HS + + G+V +GR ++ LG G++ K + + V L V CG ++
Sbjct: 709 SYHSGVILESGQVMIFGRNDNTELGLGNSQKMAVRCVKPVKSLLHHACTHVLCGDGFTLV 768
Query: 301 LTRDGHIFSFGRGD 314
T + ++ +GR D
Sbjct: 769 STTEQELYFWGRKD 782
Score = 121 (47.7 bits), Expect = 0.00058, P = 0.00058
Identities = 35/102 (34%), Positives = 51/102 (50%)
Query: 230 SGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK-VNLLAGEDI 288
S +++ +A H+ LT+D E++G+G G+LGFG K SKM + V L G DI
Sbjct: 465 SRISIKQVALSKTHTMVLTNDNELFGFGDNSCGQLGFG---KFSKMENGRLVESLKGRDI 521
Query: 289 VQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPM 330
V G SV G + +FG + LG K + +PM
Sbjct: 522 QSVGVGNYFSVICCDRGTLLTFGTAKNLGLGKDAK-DSAKPM 562
Score = 106 (42.4 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 28/98 (28%), Positives = 49/98 (50%)
Query: 164 PGDIKQISVPVRVQGL-EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ 222
P D ++ P +QG E+V +VG++H+ + E G + +G N+ +LG G++Q +
Sbjct: 685 PNDY--VNKPTILQGFPERVVDFSVGSYHSGVILESGQVMIFGRNDNTELGLGNSQKMAV 742
Query: 223 PI--PVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGR 258
PV+ L + G + T + E+Y WGR
Sbjct: 743 RCVKPVKSLLHHACTHVLCGDGFTLVSTTEQELYFWGR 780
Score = 103 (41.3 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 33/122 (27%), Positives = 52/122 (42%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTK 60
+ + + +G GQLG G + E +V++L+ ++SV G+ S+ CD G
Sbjct: 482 LTNDNELFGFGDNSCGQLGFGKFSKMENGRLVESLKGRDIQSVGVGNYFSVICCDRGTLL 541
Query: 61 T----ENI-----------PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQ 105
T +N+ P + L I G H +AV + G WG N+YGQ
Sbjct: 542 TFGTAKNLGLGKDAKDSAKPMLLEQLLRENIKDIYCGHDHVVAVLESGECLGWGSNQYGQ 601
Query: 106 CG 107
G
Sbjct: 602 LG 603
Score = 99 (39.9 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 32/108 (29%), Positives = 46/108 (42%)
Query: 223 PIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRL------GFGDNDKSSKM- 275
P + S +V AG + L+DDG + G +H +L GF +K +
Sbjct: 628 PFQIPMPSNKKIVYGKAGKDATMLLSDDGSLIAMGSNKHNKLNLTQRVGFFTKEKKTPND 687
Query: 276 VPQKVNLLAG--EDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYG 321
K +L G E +V S G HS + G + FGR D+ LG G
Sbjct: 688 YVNKPTILQGFPERVVDFSVGSYHSGVILESGQVMIFGRNDNTELGLG 735
Score = 45 (20.9 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 8 IAWGSGEDGQLGI 20
+ WGS + GQLG+
Sbjct: 592 LGWGSNQYGQLGL 604
>UNIPROTKB|F1RQL8 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292
OMA:VSALHHK GeneTree:ENSGT00700000104160 EMBL:CU392845
Ensembl:ENSSSCT00000004926 Uniprot:F1RQL8
Length = 1346
Score = 173 (66.0 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 40/121 (33%), Positives = 64/121 (52%)
Query: 201 LWAWGNNEYGQLGTGDTQPRSQP--IPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGR 258
++ WG+N LG G + P + + SG+ + + +HS L+ G+VY G
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGVYIKQVVLCKFHSVFLSQKGQVYTCGH 203
Query: 259 GEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRL 318
G GRLG GD + + +VP+ V L+G + QV+ H+V LT DG +++FG +L
Sbjct: 204 GPGGRLGHGD--EQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQL 261
Query: 319 G 319
G
Sbjct: 262 G 262
Score = 170 (64.9 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 51/158 (32%), Positives = 81/158 (51%)
Query: 182 VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGG 241
+K + + FH++ L + G ++ G+ G+LG GD Q P V+GLSG +AA
Sbjct: 179 IKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAK 238
Query: 242 WHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNL--LAGEDIVQVSCGGTHSV 299
H+ LT+DG VY +G +LG S+ VP+++ L G I+ V+ G H+V
Sbjct: 239 DHTVVLTEDGCVYTFGLNIFHQLGIIP-PPSNCNVPRQMQAKYLKGRTIIGVAAGRFHTV 297
Query: 300 ALTRDGHIFSFGRGDHGRLGY-----GRKVTTGQPMEV 332
TR+ +++ G G+LG+ G K T P +V
Sbjct: 298 LWTREA-VYTLGLNG-GQLGHLLDPSGEKCVTA-PRQV 332
>UNIPROTKB|E9PDR5 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964822
ProteinModelPortal:E9PDR5 SMR:E9PDR5 Ensembl:ENST00000503631
UCSC:uc011dyw.1 ArrayExpress:E9PDR5 Bgee:E9PDR5 Uniprot:E9PDR5
Length = 1152
Score = 171 (65.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 40/121 (33%), Positives = 63/121 (52%)
Query: 201 LWAWGNNEYGQLGTGDTQPRSQP--IPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGR 258
++ WG+N LG G + P + + SG+ + + +HS L+ G+VY G
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGH 203
Query: 259 GEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRL 318
G GRLG GD + + +VP+ V L G + QV+ H+V LT DG +++FG +L
Sbjct: 204 GPGGRLGHGD--EQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQL 261
Query: 319 G 319
G
Sbjct: 262 G 262
Score = 169 (64.5 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 46/140 (32%), Positives = 74/140 (52%)
Query: 182 VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGG 241
+K + + FH++ L + G ++ G+ G+LG GD Q P V+GL+G +AA
Sbjct: 179 IKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAK 238
Query: 242 WHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNL--LAGEDIVQVSCGGTHSV 299
H+ LT+DG VY +G +LG SS VP+++ L G I+ V+ G H+V
Sbjct: 239 DHTVVLTEDGCVYTFGLNIFHQLGIIP-PPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTV 297
Query: 300 ALTRDGHIFSFGRGDHGRLG 319
TR+ +++ G G+LG
Sbjct: 298 LWTREA-VYTMGLNG-GQLG 315
Score = 120 (47.3 bits), Expect = 0.00089, P = 0.00089
Identities = 38/102 (37%), Positives = 54/102 (52%)
Query: 227 QGLSGLTLVDIAAGGWHSTAL-TDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLA- 284
+GLS L LV + H TD +VY WG + LG G ++SK P+ V+L +
Sbjct: 118 EGLSALDLV-MKDRPTHVVFKNTDPTDVYTWGDNTNFTLGHGS--QNSKHHPELVDLFSR 174
Query: 285 -GEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVT 325
G I QV HSV L++ G +++ G G GRLG+G + T
Sbjct: 175 SGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQT 216
>UNIPROTKB|E7EPI0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964356
ProteinModelPortal:E7EPI0 SMR:E7EPI0 Ensembl:ENST00000510291
UCSC:uc011dyv.1 ArrayExpress:E7EPI0 Bgee:E7EPI0 Uniprot:E7EPI0
Length = 1338
Score = 171 (65.3 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 40/121 (33%), Positives = 63/121 (52%)
Query: 201 LWAWGNNEYGQLGTGDTQPRSQP--IPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGR 258
++ WG+N LG G + P + + SG+ + + +HS L+ G+VY G
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGH 203
Query: 259 GEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRL 318
G GRLG GD + + +VP+ V L G + QV+ H+V LT DG +++FG +L
Sbjct: 204 GPGGRLGHGD--EQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQL 261
Query: 319 G 319
G
Sbjct: 262 G 262
Score = 169 (64.5 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 46/140 (32%), Positives = 74/140 (52%)
Query: 182 VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGG 241
+K + + FH++ L + G ++ G+ G+LG GD Q P V+GL+G +AA
Sbjct: 179 IKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAK 238
Query: 242 WHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNL--LAGEDIVQVSCGGTHSV 299
H+ LT+DG VY +G +LG SS VP+++ L G I+ V+ G H+V
Sbjct: 239 DHTVVLTEDGCVYTFGLNIFHQLGIIP-PPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTV 297
Query: 300 ALTRDGHIFSFGRGDHGRLG 319
TR+ +++ G G+LG
Sbjct: 298 LWTREA-VYTMGLNG-GQLG 315
>UNIPROTKB|Q9P2D0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0016020 "membrane" evidence=IEA]
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0019901
"protein kinase binding" evidence=IDA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IDA] [GO:0051209
"release of sequestered calcium ion into cytosol" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0019901
GO:GO:0016020 Pathway_Interaction_DB:bcr_5pathway GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0030292 EMBL:DQ005633 EMBL:DQ005634
EMBL:DQ005635 EMBL:AB037838 EMBL:AL050333 EMBL:BC027490
EMBL:BC038244 EMBL:BC042171 EMBL:BC113696 EMBL:BC113698
EMBL:AL050018 EMBL:AF235049 IPI:IPI00792333 IPI:IPI00829736
IPI:IPI00910313 PIR:T08705 RefSeq:NP_056340.2 UniGene:Hs.306425
ProteinModelPortal:Q9P2D0 SMR:Q9P2D0 IntAct:Q9P2D0 MINT:MINT-215747
STRING:Q9P2D0 PhosphoSite:Q9P2D0 DMDM:134034141 PaxDb:Q9P2D0
PRIDE:Q9P2D0 DNASU:25998 Ensembl:ENST00000306270 GeneID:25998
KEGG:hsa:25998 UCSC:uc003pjl.1 UCSC:uc003pjm.2 CTD:25998
GeneCards:GC06M082879 HGNC:HGNC:17853 HPA:HPA023826 MIM:606457
neXtProt:NX_Q9P2D0 PharmGKB:PA134898277 HOVERGEN:HBG081779
InParanoid:Q9P2D0 OMA:VSALHHK OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK
GenomeRNAi:25998 NextBio:47714 ArrayExpress:Q9P2D0 Bgee:Q9P2D0
Genevestigator:Q9P2D0 Uniprot:Q9P2D0
Length = 1353
Score = 171 (65.3 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 40/121 (33%), Positives = 63/121 (52%)
Query: 201 LWAWGNNEYGQLGTGDTQPRSQP--IPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGR 258
++ WG+N LG G + P + + SG+ + + +HS L+ G+VY G
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGH 203
Query: 259 GEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRL 318
G GRLG GD + + +VP+ V L G + QV+ H+V LT DG +++FG +L
Sbjct: 204 GPGGRLGHGD--EQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQL 261
Query: 319 G 319
G
Sbjct: 262 G 262
Score = 169 (64.5 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 46/140 (32%), Positives = 74/140 (52%)
Query: 182 VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGG 241
+K + + FH++ L + G ++ G+ G+LG GD Q P V+GL+G +AA
Sbjct: 179 IKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAK 238
Query: 242 WHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNL--LAGEDIVQVSCGGTHSV 299
H+ LT+DG VY +G +LG SS VP+++ L G I+ V+ G H+V
Sbjct: 239 DHTVVLTEDGCVYTFGLNIFHQLGIIP-PPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTV 297
Query: 300 ALTRDGHIFSFGRGDHGRLG 319
TR+ +++ G G+LG
Sbjct: 298 LWTREA-VYTMGLNG-GQLG 315
>UNIPROTKB|J3KQ33 [details] [associations]
symbol:ALS2 "Alsin" species:9606 "Homo sapiens" [GO:0001662
"behavioral fear response" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001726 "ruffle"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016050 "vesicle organization"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016601 "Rac protein signal transduction" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0030426 "growth cone" evidence=IEA] [GO:0032313
"regulation of Rab GTPase activity" evidence=IEA] [GO:0035249
"synaptic transmission, glutamatergic" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IEA] INTERPRO:IPR000408
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AC007242
EMBL:AC007279 HGNC:HGNC:443 ChiTaRS:ALS2 PROSITE:PS50012
ProteinModelPortal:J3KQ33 Ensembl:ENST00000409632 Uniprot:J3KQ33
Length = 139
Score = 143 (55.4 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 33/95 (34%), Positives = 51/95 (53%)
Query: 136 VRQVAAGGTHSVVLTREGHVWTWGQ-PWPPGDIKQI-SVPVRVQGL--EQVKLIAVGAFH 191
V Q A G H V+LT +G V+++G PW G ++ S P+ L + V +A G+FH
Sbjct: 43 VLQAALGVKHGVLLTEDGEVYSFGTLPWRSGPVEICPSSPILENALVGQYVITVATGSFH 102
Query: 192 NLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPV 226
+ A+ ++G + WG N GQ + Q +P PV
Sbjct: 103 SGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPV 137
Score = 123 (48.4 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 33/104 (31%), Positives = 51/104 (49%)
Query: 162 WPPGDIKQISVPVRVQGL--EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQP 219
W G P R+ G + V A+G H + L EDG ++++G + + G + P
Sbjct: 23 WQAGSFP--ITPERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFGTLPW-RSGPVEICP 79
Query: 220 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGR 263
S PI L G ++ +A G +HS A+TD+G Y WG G+
Sbjct: 80 -SSPILENALVGQYVITVATGSFHSGAVTDNGVAYMWGENSAGQ 122
>ASPGD|ASPL0000042168 [details] [associations]
symbol:AN2073 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 EMBL:BN001307
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:AACD01000032 PRINTS:PR00633 PROSITE:PS50012
eggNOG:COG5184 OrthoDB:EOG42VCR5 RefSeq:XP_659677.1
ProteinModelPortal:Q5BBK7 EnsemblFungi:CADANIAT00008743
GeneID:2875213 KEGG:ani:AN2073.2 HOGENOM:HOG000182979 OMA:DRLSQIC
Uniprot:Q5BBK7
Length = 1680
Score = 171 (65.3 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 49/180 (27%), Positives = 92/180 (51%)
Query: 151 REGHVWTWGQPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQED--GALWAWGNNE 208
R V T P P D + + ++ + L+ ++ +A+ H L +D L+ G
Sbjct: 397 RHDDVKTASSP-DPSD-QDLPAFIKARPLK-IQTLAMSKLHTAILTDDPESNLFICGFGP 453
Query: 209 YGQLGTGDTQPRSQPIPVQG--LSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGF 266
G+LGTGD R + ++G L+ + +A G H+ A+T+ G+++ WG + G+LG+
Sbjct: 454 GGRLGTGDESTRFSFVCIEGGGLANKKVASVALGQDHTLAITEHGDIFSWGSNKFGQLGY 513
Query: 267 G---DNDKSS---KMVPQKV-NLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLG 319
G N+K ++ P+++ N E I+ + HSV + G +++FG+ + G+LG
Sbjct: 514 GLPRANNKDDVPVQLSPRQIFNPFKKEVILGAAASAVHSVVYSTSG-LYTFGKNE-GQLG 571
Score = 146 (56.5 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 41/125 (32%), Positives = 61/125 (48%)
Query: 219 PRSQPIPVQ-GLSGLTLVDIAAGGWHSTALTDDGE--VYGWGRGEHGRLGFGDNDKSSKM 275
P Q +P L + +A H+ LTDD E ++ G G GRLG GD
Sbjct: 409 PSDQDLPAFIKARPLKIQTLAMSKLHTAILTDDPESNLFICGFGPGGRLGTGDESTRFSF 468
Query: 276 VPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPIN 335
V + LA + + V+ G H++A+T G IFS+G G+LGYG + +VP+
Sbjct: 469 VCIEGGGLANKKVASVALGQDHTLAITEHGDIFSWGSNKFGQLGYGLPRANNKD-DVPVQ 527
Query: 336 IPAPR 340
+ +PR
Sbjct: 528 L-SPR 531
Score = 142 (55.0 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 46/161 (28%), Positives = 81/161 (50%)
Query: 180 EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQP-IPVQGLSGL------ 232
++V +A+G H LA+ E G +++WG+N++GQLG G + ++ +PVQ LS
Sbjct: 479 KKVASVALGQDHTLAITEHGDIFSWGSNKFGQLGYGLPRANNKDDVPVQ-LSPRQIFNPF 537
Query: 233 ---TLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMV---PQKVNL-LAG 285
++ AA HS + G +Y +G+ E G+LG D+D S V P++V L
Sbjct: 538 KKEVILGAAASAVHSVVYSTSG-LYTFGKNE-GQLGLVDSDARSLEVQTTPRRVGASLFS 595
Query: 286 EDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTT 326
I VS + L ++ ++ F + RL + ++ +
Sbjct: 596 TPIQSVSATDQATAILLQNHEVWVFAHYGYSRLSFPLEINS 636
Score = 128 (50.1 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 33/109 (30%), Positives = 55/109 (50%)
Query: 56 DGKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG---EEPER 112
D T+ + + L+N K+ A+G H LA+ + G ++WG N++GQ G
Sbjct: 461 DESTRFSFVCIEGGGLANKKVASVALGQDHTLAITEHGDIFSWGSNKFGQLGYGLPRANN 520
Query: 113 KDDTG-RILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ 160
KDD ++ R I P + K ++ AA HSVV + G ++T+G+
Sbjct: 521 KDDVPVQLSPRQIFNPFK---KEVILGAAASAVHSVVYSTSG-LYTFGK 565
Score = 76 (31.8 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 34/134 (25%), Positives = 58/134 (43%)
Query: 186 AVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS---QPIPVQ---GLSGLTLVDIAA 239
A A H++ G L+ +G NE GQLG D+ RS Q P + L + ++A
Sbjct: 546 AASAVHSVVYSTSG-LYTFGKNE-GQLGLVDSDARSLEVQTTPRRVGASLFSTPIQSVSA 603
Query: 240 GGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGED----IVQVSCGG 295
+ L + EV+ + + RL F + +S+ + + IV++ GG
Sbjct: 604 TDQATAILLQNHEVWVFAHYGYSRLSF-PLEINSRFIRDSFMATRYDTSINRIVKIRSGG 662
Query: 296 THSVALTRDGHIFS 309
AL+ G +F+
Sbjct: 663 NTICALSSSGDVFT 676
Score = 42 (19.8 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 201 LWAWGNNEYGQLGTGDTQPRSQP 223
++ +G+N+ LG GD R P
Sbjct: 353 VFTFGSNKNLNLGVGDQDDRQYP 375
>UNIPROTKB|E9PS70 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00985461 ProteinModelPortal:E9PS70 SMR:E9PS70
Ensembl:ENST00000532389 ArrayExpress:E9PS70 Bgee:E9PS70
Uniprot:E9PS70
Length = 137
Score = 142 (55.0 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 44/130 (33%), Positives = 62/130 (47%)
Query: 148 VLTREGHVWT-----WGQPWPPGDIKQISVPVRVQ-GLEQVKLIAVGAFHNLALQEDGAL 201
+LT G V + +GQ P ++ VP ++ E+V IA G H +A G +
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIV 60
Query: 202 WAWGNN--EYGQ-LGTGDTQP----RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVY 254
+ WG G+ L G T P +P V GL + + AG HS +LTD GEVY
Sbjct: 61 FQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVY 120
Query: 255 GWGRGEHGRL 264
WG +HG+L
Sbjct: 121 VWGSNKHGQL 130
Score = 129 (50.5 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 44/130 (33%), Positives = 61/130 (46%)
Query: 195 LQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQ-GLSGLTLVDIAAGGWHSTALTDDGEV 253
L E+G + + G+N +GQLG PR +P L +V IAAG H+ A T G V
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHG-PRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIV 60
Query: 254 YGWGRG--EHGR-LGFGDNDKS--SKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIF 308
+ WG G GR L G + P +V L + V G HS +LT G ++
Sbjct: 61 FQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVY 120
Query: 309 SFGRGDHGRL 318
+G HG+L
Sbjct: 121 VWGSNKHGQL 130
Score = 121 (47.7 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 43/136 (31%), Positives = 62/136 (45%)
Query: 91 DQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCA-PKLIVRQVAAGGTHSVVL 149
+ G+ + G N +GQ G P R V+PQ K V +AAG H+V
Sbjct: 4 ENGQVLSCGSNSFGQLGV-PHGP--------RRCVVPQAIELHKEKVVCIAAGLRHAVAA 54
Query: 150 TREGHVWTWGQPWP-------PGDIKQI----SVPVRVQGLEQVKLIAV--GAFHNLALQ 196
T G V+ WG PG + P RV GLE K + V G+ H+ +L
Sbjct: 55 TASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLT 114
Query: 197 EDGALWAWGNNEYGQL 212
+ G ++ WG+N++GQL
Sbjct: 115 DAGEVYVWGSNKHGQL 130
Score = 96 (38.9 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 61 TENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 109
T PS+V L N+K + G H ++ D G Y WG N++GQ E
Sbjct: 85 TAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANE 133
Score = 63 (27.2 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVV-KALEPYK--VRSVVAGSRNSLAICDDG 57
+++ GS GQLG+ + R CVV +A+E +K V + AG R+++A G
Sbjct: 8 VLSCGSNSFGQLGVPHGPRR---CVVPQAIELHKEKVVCIAAGLRHAVAATASG 58
>UNIPROTKB|F1NXV1 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=IEA] [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:AADN02002424 EMBL:AADN02002425
IPI:IPI00590269 Ensembl:ENSGALT00000025575 Uniprot:F1NXV1
Length = 1359
Score = 168 (64.2 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 50/158 (31%), Positives = 79/158 (50%)
Query: 182 VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGG 241
+K + + FH++ L G ++ G+ + G+LG GD Q P V+GLS IAA
Sbjct: 182 IKQVVLCKFHSVFLSHKGQIYTCGHGQGGRLGHGDEQTCLVPRLVEGLSSHQCSQIAAAK 241
Query: 242 WHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNL--LAGEDIVQVSCGGTHSV 299
H+ LT+DG VY +G +LG + VP++V L G ++ V+ G H+V
Sbjct: 242 DHTVVLTEDGCVYTFGLNTFHQLGILPPPANCS-VPRQVQAKNLKGRMVIGVAAGRFHTV 300
Query: 300 ALTRDGHIFSFGRGDHGRLGY-----GRKVTTGQPMEV 332
T++ +++ G G+LGY G K T P +V
Sbjct: 301 LWTKEA-VYTMGLNG-GQLGYLLDPNGEKCVTA-PRQV 335
Score = 168 (64.2 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 68/233 (29%), Positives = 104/233 (44%)
Query: 91 DQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLT 150
D Y WG N G ++ ++ D+ P+ + ++QV HSV L+
Sbjct: 143 DLTEVYTWGNNINFTLGHGGQQSKHHPELV--DL-FPRN---SVYIKQVVLCKFHSVFLS 196
Query: 151 REGHVWTWGQPWPP----GDIKQISVPVRVQGLE--QVKLIAVGAFHNLALQEDGALWAW 204
+G ++T G GD + VP V+GL Q IA H + L EDG ++ +
Sbjct: 197 HKGQIYTCGHGQGGRLGHGDEQTCLVPRLVEGLSSHQCSQIAAAKDHTVVLTEDGCVYTF 256
Query: 205 GNNEYGQLGTGDTQPR-SQPIPVQG--LSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEH 261
G N + QLG S P VQ L G ++ +AAG +H+ T + VY G
Sbjct: 257 GLNTFHQLGILPPPANCSVPRQVQAKNLKGRMVIGVAAGRFHTVLWTKEA-VYTMGLNG- 314
Query: 262 GRLGFGDNDKSSKMV--PQKVNLLAGEDI----VQVSCGGTHSVALTRDGHIF 308
G+LG+ + K V P++V+ L +D+ V S G T V +T G I+
Sbjct: 315 GQLGYLLDPNGEKCVTAPRQVSALHHKDVSVSLVSASDGAT--VCVTERGDIY 365
>UNIPROTKB|H0YD20 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 PANTHER:PTHR22870:SF7
HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058 EMBL:AC124078
Ensembl:ENST00000532546 Bgee:H0YD20 Uniprot:H0YD20
Length = 126
Score = 139 (54.0 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 42/111 (37%), Positives = 56/111 (50%)
Query: 211 QLGTGDTQP----RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGF 266
+L G T P +P V GL + + AG HS +LTD GEVY WG +HG+L
Sbjct: 3 RLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLA- 61
Query: 267 GDNDKSSKMVPQKV--NLLAGEDIVQVSCGGTHSVALTRDGHIFSFGR-GD 314
N+ + VPQK+ + E + + G TH VA T D + S GR GD
Sbjct: 62 --NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQT-DTELHS-GRCGD 108
Score = 100 (40.3 bits), Expect = 0.00013, P = 0.00013
Identities = 27/80 (33%), Positives = 39/80 (48%)
Query: 173 PVRVQGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDT-QPRSQPIPVQGL 229
P RV GLE K + V G+ H+ +L + G ++ WG+N++GQL P Q I
Sbjct: 19 PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCF 78
Query: 230 SGLTLVDIAAGGWHSTALTD 249
+ I +G H A TD
Sbjct: 79 QNEKVTAIWSGWTHLVAQTD 98
Score = 96 (38.9 bits), Expect = 0.00036, P = 0.00036
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 61 TENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 109
T PS+V L N+K + G H ++ D G Y WG N++GQ E
Sbjct: 15 TAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANE 63
>RGD|1311697 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10116 "Rattus norvegicus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OrthoDB:EOG4J6RQ1
GeneTree:ENSGT00700000104160 IPI:IPI00370548
Ensembl:ENSRNOT00000056930 ArrayExpress:D3ZH46 Uniprot:D3ZH46
Length = 1352
Score = 166 (63.5 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 39/121 (32%), Positives = 62/121 (51%)
Query: 201 LWAWGNNEYGQLGTGDTQPRSQP--IPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGR 258
++ WG+N LG G + P + + S + + + +HS L+ G+VY G
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELLDLFSRSRVYVKQVVLCKFHSVFLSQQGQVYTCGH 203
Query: 259 GEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRL 318
G GRLG GD + + +VP+ V L+G QV+ H+V LT DG +++FG +L
Sbjct: 204 GRGGRLGHGD--EQTCLVPRLVEGLSGHSCSQVAAAKDHTVVLTEDGCVYTFGLNTFHQL 261
Query: 319 G 319
G
Sbjct: 262 G 262
Score = 143 (55.4 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 49/155 (31%), Positives = 73/155 (47%)
Query: 182 VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGG 241
VK + + FH++ L + G ++ G+ G+LG GD Q P V+GLSG + +AA
Sbjct: 179 VKQVVLCKFHSVFLSQQGQVYTCGHGRGGRLGHGDEQTCLVPRLVEGLSGHSCSQVAAAK 238
Query: 242 WHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK--VNLLAGEDIVQVSCGGTHSV 299
H+ LT+DG VY +G +LG SS VP++ V + G +V V
Sbjct: 239 DHTVVLTEDGCVYTFGLNTFHQLGIIP-PPSSCNVPRQLTVRMKKGHTVVCRKAWRFWQV 297
Query: 300 ALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPI 334
T + + G G LG RK +GQ V +
Sbjct: 298 LWTSEDFLV-LGLNS-GHLGILRK-PSGQQCVVSV 329
>POMBASE|SPAC10F6.04 [details] [associations]
symbol:SPAC10F6.04 "RCC domain protein Ats1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006400 "tRNA modification"
evidence=ISO] [GO:0007017 "microtubule-based process" evidence=ISO]
PomBase:SPAC10F6.04 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0006400 GO:GO:0007017 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
KO:K15462 OrthoDB:EOG4H75MP PIR:T37498 RefSeq:NP_593255.1
ProteinModelPortal:O42645 STRING:O42645 EnsemblFungi:SPAC10F6.04.1
GeneID:2542973 KEGG:spo:SPAC10F6.04 OMA:WIVIEEN NextBio:20804007
Uniprot:O42645
Length = 351
Score = 156 (60.0 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 43/146 (29%), Positives = 65/146 (44%)
Query: 182 VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVD----- 236
++ I+ G H L L ED LWA G+N GQ G +P P+ L T V
Sbjct: 33 IEKISCGGNHTLLLDEDSQLWACGDNRKGQCGYEVKEPLYNPLSPDYLRIFTRVSHERWV 92
Query: 237 IAAGGWHSTALT--DDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGED-IVQVSC 293
GW + + D V G G G LG G+ S + + L ++ I+ +S
Sbjct: 93 FLTCGWEFSVIVHADRRRVCSCGEGLSGELGQGNRSNSQGLREIDIPYLDDKEFIIDISA 152
Query: 294 GGTHSVALTRDGHIFSFGRGDHGRLG 319
G H + +T +G+++ G G G+LG
Sbjct: 153 GLRHWICVTNEGNLYGCGDGRKGQLG 178
Score = 40 (19.1 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 7 IIAWGSGEDGQLGIGNNEE 25
+++ GS + QLG+ N+E+
Sbjct: 2 LLSLGSNGNFQLGLNNDED 20
>SGD|S000004067 [details] [associations]
symbol:FMP25 "Protein required for assembly of respiratory
complex III" species:4932 "Saccharomyces cerevisiae" [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0031966 "mitochondrial membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IMP] [GO:0031305 "integral to mitochondrial inner
membrane" evidence=IDA] [GO:0016020 "membrane" evidence=IEA]
SGD:S000004067 INTERPRO:IPR000408 Pfam:PF00415 EMBL:BK006945
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0031305
EMBL:U53880 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0034551 EMBL:Z73250 EMBL:Z73249 EMBL:AY723844
PIR:S64909 RefSeq:NP_013178.1 ProteinModelPortal:Q08023 SMR:Q08023
DIP:DIP-4474N IntAct:Q08023 MINT:MINT-504101 STRING:Q08023
PaxDb:Q08023 PeptideAtlas:Q08023 EnsemblFungi:YLR077W GeneID:850766
KEGG:sce:YLR077W CYGD:YLR077w HOGENOM:HOG000111193 OMA:KLIEPED
OrthoDB:EOG4ZCXDB NextBio:966924 Genevestigator:Q08023
GermOnline:YLR077W Uniprot:Q08023
Length = 583
Score = 150 (57.9 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 53/194 (27%), Positives = 92/194 (47%)
Query: 181 QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQ-------PRSQPIPVQ----GL 229
++K IA G++H LA+ + G ++A+G N +GQL + PRS + G+
Sbjct: 373 EIKKIACGSYHTLAIDKTGEIYAFGWNRFGQLALPISYNLEYVSFPRSVTHAFKPHFPGM 432
Query: 230 SGLTLVDIAAGGWHSTAL------TDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLL 283
+ VDI S T D + +G G G LG + K+S+ P K+
Sbjct: 433 TNWKCVDIHCDDETSFVTIRKPGSTSDHHYFAFGNGLFGELG-NNTFKNSQCDPIKIKS- 490
Query: 284 AGEDIVQVSCGGTHSV--ALTRDGHIFSFGRGDHGRLGYGRK-VTTGQPMEVPINIPAPR 340
+ + SCG +H V ++ + ++G DHG+LG G+K + +PM +P + +
Sbjct: 491 DDKKLTNWSCG-SHCVFTETEQENEVIAWGNNDHGQLGIGKKTMKCAKPMNIPEVLKPGQ 549
Query: 341 NAGDGVDRRWIAKL 354
+ D +D + +KL
Sbjct: 550 DTTD-LDSIYNSKL 562
Score = 90 (36.7 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 31/117 (26%), Positives = 52/117 (44%)
Query: 198 DGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHS--TALTDDGEVYG 255
D +A+GN +G+LG +T SQ P++ S + + G H T + EV
Sbjct: 459 DHHYFAFGNGLFGELGN-NTFKNSQCDPIKIKSDDKKLTNWSCGSHCVFTETEQENEVIA 517
Query: 256 WGRGEHGRLGFGDND-KSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFG 311
WG +HG+LG G K +K + L G+D + + L ++ + + G
Sbjct: 518 WGNNDHGQLGIGKKTMKCAKPMNIPEVLKPGQDTTDLDSIYNSKLHLKKEQRVVTNG 574
Score = 77 (32.2 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 75 KIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQ 105
+I + A G +H LA+D G YA+G N +GQ
Sbjct: 373 EIKKIACGSYHTLAIDKTGEIYAFGWNRFGQ 403
Score = 53 (23.7 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 25/90 (27%), Positives = 40/90 (44%)
Query: 23 NEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKTE-NIPSQVNALSNTK-----I 76
N++ E + V+ P + S V+ R+ L KTK + Q N + N K +
Sbjct: 242 NKKGE-ILVIPIRTPDLIASQVSSRRSKLL---PWKTKLRYDWKLQTNQIFNGKEGEKRV 297
Query: 77 VQAAIGGWHCLAVDDQGRAYAWG-GNEYGQ 105
VQ G H + + + G+AY GN+ Q
Sbjct: 298 VQFDAGSHHLVLLSNLGKAYCCATGNDQKQ 327
Score = 38 (18.4 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 10/27 (37%), Positives = 12/27 (44%)
Query: 162 WPPGDIKQISVPVRVQGLEQVKLIAVG 188
WP QI+ +Q KL AVG
Sbjct: 59 WPEKSPDQITKESELQWERMAKLSAVG 85
>UNIPROTKB|F1NXI7 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00587804 Ensembl:ENSGALT00000010065 Uniprot:F1NXI7
Length = 231
Score = 148 (57.2 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 51/187 (27%), Positives = 81/187 (43%)
Query: 180 EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAA 239
+ +K IA G H+ + G L+ G+N+ GQLG T+ LSG + ++A
Sbjct: 50 QDIKSIAGGGGHSAVITGAGELFVCGHNKAGQLGLNHTEDVLCFTLCTALSGFCVQEVAC 109
Query: 240 GGWHSTALTDD-GEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHS 298
G W T + G V G G+LG ++PQK+ E V ++ G H+
Sbjct: 110 G-WDFTIILGRAGLVLSCGSNAFGQLGV-PQISGPCLIPQKIKQSLKEKAVGIAAGLRHA 167
Query: 299 VALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACG 358
+A T G +F +G G R ++V G+ + V P D + K VA G
Sbjct: 168 LAATESGLVFQWGTGMASR---AKRVHQGKTLPVFWAAKEPCEIKGLEDVK--VKRVAAG 222
Query: 359 GRHTLAI 365
H +++
Sbjct: 223 SYHCVSL 229
Score = 137 (53.3 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 58/217 (26%), Positives = 94/217 (43%)
Query: 99 GGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTW 158
G N YGQ G ++D L +D+ +C ++ +A GG HS V+T G ++
Sbjct: 21 GANSYGQLGLG-HKEDVLVPQLLKDVSC--KCQD---IKSIAGGGGHSAVITGAGELFVC 74
Query: 159 G--QPWPPG-----DIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQ 211
G + G D+ ++ + G V+ +A G + L G + + G+N +GQ
Sbjct: 75 GHNKAGQLGLNHTEDVLCFTLCTALSGF-CVQEVACGWDFTIILGRAGLVLSCGSNAFGQ 133
Query: 212 LGTGDTQ-PRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDND 270
LG P P ++ V IAAG H+ A T+ G V+ WG G R
Sbjct: 134 LGVPQISGPCLIPQKIKQSLKEKAVGIAAGLRHALAATESGLVFQWGTGMASRAKRVHQG 193
Query: 271 KSSKMV-----PQKVNLLAGEDIVQVSCGGTHSVALT 302
K+ + P ++ L + +V+ G H V+LT
Sbjct: 194 KTLPVFWAAKEPCEIKGLEDVKVKRVAAGSYHCVSLT 230
Score = 136 (52.9 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 48/165 (29%), Positives = 74/165 (44%)
Query: 205 GNNEYGQLGTGDTQPRSQPIPVQGLSGLT--LVDIAAGGWHSTALTDDGEVYGWGRGEHG 262
G N YGQLG G + P ++ +S + IA GG HS +T GE++ G + G
Sbjct: 21 GANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCGHNKAG 80
Query: 263 RLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGR 322
+LG N + L+G + +V+CG ++ L R G + S G G+LG +
Sbjct: 81 QLGL--NHTEDVLCFTLCTALSGFCVQEVACGWDFTIILGRAGLVLSCGSNAFGQLGVPQ 138
Query: 323 KVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
+G P +P I + + + +A G RH LA E
Sbjct: 139 --ISG-PCLIPQKIK------QSLKEKAVG--IAAGLRHALAATE 172
Score = 126 (49.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 51/189 (26%), Positives = 84/189 (44%)
Query: 76 IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPK-- 133
I A GG H + G + G N+ GQ G + T D++ C
Sbjct: 52 IKSIAGGGGHSAVITGAGELFVCGHNKAGQLG-----LNHT-----EDVLCFTLCTALSG 101
Query: 134 LIVRQVAAGGTHSVVLTREGHVWTWGQ-PWPPGDIKQIS----VPVRV-QGLEQVKL-IA 186
V++VA G +++L R G V + G + + QIS +P ++ Q L++ + IA
Sbjct: 102 FCVQEVACGWDFTIILGRAGLVLSCGSNAFGQLGVPQISGPCLIPQKIKQSLKEKAVGIA 161
Query: 187 VGAFHNLALQEDGALWAWGN---NEYGQLGTGDTQP----RSQPIPVQGLSGLTLVDIAA 239
G H LA E G ++ WG + ++ G T P +P ++GL + + +AA
Sbjct: 162 AGLRHALAATESGLVFQWGTGMASRAKRVHQGKTLPVFWAAKEPCEIKGLEDVKVKRVAA 221
Query: 240 GGWHSTALT 248
G +H +LT
Sbjct: 222 GSYHCVSLT 230
>POMBASE|SPCC330.11 [details] [associations]
symbol:btb1 "BTB/POZ domain protein Btb1" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IC] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00023 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 UniPathway:UPA00143
PomBase:SPCC330.11 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CU329672
GenomeReviews:CU329672_GR Gene3D:1.25.40.20 InterPro:IPR020683
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0006511 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0000151 eggNOG:COG5184
PIR:T41321 RefSeq:NP_587711.1 ProteinModelPortal:O74881
IntAct:O74881 STRING:O74881 EnsemblFungi:SPCC330.11.1
GeneID:2538714 KEGG:spo:SPCC330.11 OMA:STSELCT OrthoDB:EOG42VCR5
NextBio:20799899 Uniprot:O74881
Length = 1347
Score = 154 (59.3 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 60/212 (28%), Positives = 103/212 (48%)
Query: 136 VRQVAAGGTHSVVLTREG----HVWTWGQPWPPG---DIKQISVPVRVQGL-EQVKLIAV 187
+ V A HSVVLT E +V G G D++ +P+ G+ +V I+V
Sbjct: 197 ILDVQASKFHSVVLTDEPSQNVYVCGIGAGGRIGFNTDVQYNFIPI--PGIIHKVIQISV 254
Query: 188 GAFHNLALQEDGALWAWGNNEYGQLG-TGDTQPRSQPI---P--VQGLSGLTLVDIAAGG 241
H+LAL + G++++WG N G+LG + D + PI P + ++ +AAG
Sbjct: 255 SHTHSLALTKFGSIYSWGKNGSGELGLSNDELKKDDPIQITPRRISAFKDYQIIGMAAGK 314
Query: 242 WHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV-NLLAGEDIVQVSCGGTHSVA 300
+S A TD ++Y WG +G+LG D+ S P++V LL+ ++ C ++
Sbjct: 315 SYSVAWTDT-DIYSWGLN-NGQLGISDHI-SVVSTPRRVAGLLS--PVIHAVCTTRATIC 369
Query: 301 LTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
L ++ I +F + +L + V G ++V
Sbjct: 370 LLQNNSIIAFCNYNQVKLPFN--VDFGSSLKV 399
Score = 138 (53.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 36/109 (33%), Positives = 59/109 (54%)
Query: 234 LVDIAAGGWHSTALTDDGE--VYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQV 291
++D+ A +HS LTD+ VY G G GR+GF + D +P ++ ++Q+
Sbjct: 197 ILDVQASKFHSVVLTDEPSQNVYVCGIGAGGRIGF-NTDVQYNFIPIP-GII--HKVIQI 252
Query: 292 SCGGTHSVALTRDGHIFSFGRGDHGRLGYGR-KVTTGQPMEV-PINIPA 338
S THS+ALT+ G I+S+G+ G LG ++ P+++ P I A
Sbjct: 253 SVSHTHSLALTKFGSIYSWGKNGSGELGLSNDELKKDDPIQITPRRISA 301
>DICTYBASE|DDB_G0289237 [details] [associations]
symbol:tirA "Toll-Interleukin (TIR) receptor
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0006952 "defense
response" evidence=IMP] [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR000157 InterPro:IPR002110 Pfam:PF13676
PROSITE:PS50088 PROSITE:PS50104 SMART:SM00248 InterPro:IPR001357
dictyBase:DDB_G0289237 Pfam:PF00533 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0007165 GO:GO:0006952 GO:GO:0008283 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GenomeReviews:CM000154_GR GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AAFI02000131
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 SUPFAM:SSF52200 RefSeq:XP_636358.1
ProteinModelPortal:Q54HT1 EnsemblProtists:DDB0232375 GeneID:8627031
KEGG:ddi:DDB_G0289237 eggNOG:NOG261364 InParanoid:Q54HT1
OMA:WRAEITR Uniprot:Q54HT1
Length = 1336
Score = 152 (58.6 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 47/177 (26%), Positives = 84/177 (47%)
Query: 195 LQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVY 254
+ ED + WGN + Q Q + + G V I G H+ L G++
Sbjct: 353 ITEDNRCYIWGNIKSNQK-VEQLADHYQ-VDYCSVGGSHSVMIKRG-IHTVGLNKFGQL- 408
Query: 255 GWGRGEHGRLGFGDNDKS--SKMVPQKVNLLAG---EDIVQVSCGGTHSVALTRDGHIFS 309
G+ G +G G N+K + + ++++ + ++ VSCG +V LT +G +FS
Sbjct: 409 GYKNGNTNCIGGGGNNKLMIENQIQRSISIINQNFLKKVLMVSCGKDFNVLLTNEGQVFS 468
Query: 310 FGRGDHGRLGYGRKVTTGQPMEVP-INIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
+G+ D G+LG G + + E+ +N P D ++I+ ++CGG H++AI
Sbjct: 469 WGKNDQGQLGLGNS-DSKENYEIKLVNFDDPY---DSNSNKFIS-FISCGGNHSIAI 520
Score = 122 (48.0 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 33/112 (29%), Positives = 57/112 (50%)
Query: 168 KQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ-PI-- 224
+ IS+ + L++V +++ G N+ L +G +++WG N+ GQLG G++ + I
Sbjct: 434 RSISI-INQNFLKKVLMVSCGKDFNVLLTNEGQVFSWGKNDQGQLGLGNSDSKENYEIKL 492
Query: 225 -----PVQGLSGLTLVDIAAGGWHSTAL----TDDGE--VYGWGRGEHGRLG 265
P S + I+ GG HS A+ + DG +YGWG G++G
Sbjct: 493 VNFDDPYDSNSNKFISFISCGGNHSIAIESNSSTDGNCRLYGWGSNSQGQIG 544
Score = 50 (22.7 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 69 NALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 109
N + K+ + + G C+ +D R Y WG + Q E+
Sbjct: 334 NNFKSIKLFEQSSKGLSCMITEDN-RCYIWGNIKSNQKVEQ 373
>UNIPROTKB|G4NC24 [details] [associations]
symbol:MGG_00456 "BTB domain and ankyrin repeat protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
SMART:SM00248 INTERPRO:IPR000408 EMBL:CM001235 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 RefSeq:XP_003718611.1
ProteinModelPortal:G4NC24 EnsemblFungi:MGG_00456T0 GeneID:2674172
KEGG:mgr:MGG_00456 Uniprot:G4NC24
Length = 1598
Score = 152 (58.6 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 78/292 (26%), Positives = 113/292 (38%)
Query: 46 GSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQ 105
G L + DD + + +P Q AL++ K+ Q +G H +AV D+G + WG N Y Q
Sbjct: 349 GRGGRLGLSDDQRVRFTYVPVQ-GALADRKVTQVVLGQDHTMAVTDKGELWTWGSNAYSQ 407
Query: 106 CG---EEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ-- 160
G P +KD+ L V K +V V+A HSV T V+ WG+
Sbjct: 408 LGYALPPPAKKDEEPMSLAPKQVFG--ALKKEVVIGVSASAIHSVAHTTNS-VFCWGKNS 464
Query: 161 ---PWPPGDIKQISV---PVRVQG-LEQVKLIAVGAFHNLA--LQEDGALWAWGNNEYGQ 211
D + + V P +V L ++ V A L + + + N Y
Sbjct: 465 GQLALMDADSRSLEVQQTPRKVAASLFSAPIVMVSAIDKATTVLLANHIVCVFTNYGYNM 524
Query: 212 LGTGDTQPRSQPIPVQGLSGLTLV---DIAAG-GWHSTALTDDGEVYG--WGRGEHGRLG 265
+ P P +S +V D AA G +T GE GRG+ +G
Sbjct: 525 VKF----PEIDPFATYHISNPAVVLGYDAAASKGQRICHITSGGETIAAVTGRGDLFVMG 580
Query: 266 FGDN-DKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHG 316
N D SS + G + Q C +DG + S G GDHG
Sbjct: 581 LNHNADVSSSASTTNPAKIKGS-VSQPQC----IWRAWKDG-VKSVGVGDHG 626
Score = 126 (49.4 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 42/157 (26%), Positives = 76/157 (48%)
Query: 213 GTGDTQ-PRSQPIPVQGLSGLTLV-DIAAGGWHSTALTDD--GEVYGWGRGEHGRLGFGD 268
G TQ P+ + +P L+ +V ++ +HS +T D +Y G G GRLG D
Sbjct: 299 GLEQTQFPKLEELPAMILTRPIIVHNVVLSKFHSAVITTDPVSNLYICGVGRGGRLGLSD 358
Query: 269 NDKSS-KMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTG 327
+ + VP + LA + QV G H++A+T G ++++G + +LGY
Sbjct: 359 DQRVRFTYVPVQ-GALADRKVTQVVLGQDHTMAVTDKGELWTWGSNAYSQLGYALPPPAK 417
Query: 328 QPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLA 364
+ E P+++ AP+ G ++ + V+ H++A
Sbjct: 418 KDEE-PMSL-APKQVF-GALKKEVVIGVSASAIHSVA 451
Score = 54 (24.1 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 192 NLALQE--DG-ALWAWGNNEYGQLGTGDTQPRSQP 223
N LQ+ DG L+++G+N+ LG GD R P
Sbjct: 241 NAGLQDLTDGDELFSFGSNKNMSLGVGDESDRQYP 275
>UNIPROTKB|G4N5N9 [details] [associations]
symbol:MGG_05277 "Alpha-tubulin suppressor protein Aats1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CM001233 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 KO:K15462
RefSeq:XP_003712836.1 EnsemblFungi:MGG_05277T0 GeneID:2675298
KEGG:mgr:MGG_05277 Uniprot:G4N5N9
Length = 382
Score = 119 (46.9 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 58/207 (28%), Positives = 82/207 (39%)
Query: 74 TKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPK 133
T++V + H +AV G Y WG GQ G PE R + +P + A
Sbjct: 170 TEVVGLSACMGHVVAVLSNGDVYGWGNGRKGQLGA-PEGIITEPRKIEG---VPFKVAK- 224
Query: 134 LIVRQVAAGGTHSVVLTRE---GHVWTWG-QPWPPGDIKQISVPVRVQGLEQVKLIAVGA 189
AA G L E G + G W Q S P V G ++ +
Sbjct: 225 ------AACGKEFTCLVGEPGSGDILVMGLDKWSV----QSSAPNSVPGWRDLQ----AS 270
Query: 190 FHNL-ALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALT 248
+ N+ LQ DG++ +WG N++GQL + SQ IA G H A+
Sbjct: 271 WGNIYVLQADGSILSWGRNDHGQLAPSELPKMSQ--------------IAVGSEHVVAID 316
Query: 249 DDGE-VYGWGRGEHGRLGFGDNDKSSK 274
+ + V WG GEHG G D +S+
Sbjct: 317 EARQSVAAWGWGEHGNCGPQVQDDNSQ 343
Score = 106 (42.4 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 40/145 (27%), Positives = 66/145 (45%)
Query: 159 GQPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLAL--QEDGA----LWAWGNNEYGQL 212
GQP PP +I VP +LIA ++ E G ++++G G+L
Sbjct: 89 GQPRPPV-FHKIHVPAEQAAQSPGRLIAATWEASIITGPDEQGRRNRRVYSFGCGSKGEL 147
Query: 213 GTGDT---QPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDN 269
G G P +QPI +V ++A H A+ +G+VYGWG G G+LG +
Sbjct: 148 GQGPLIIRVPFAQPIANFPPPETEVVGLSACMGHVVAVLSNGDVYGWGNGRKGQLGAPEG 207
Query: 270 DKSSKMVPQKVNLLAGEDIVQVSCG 294
+ P+K+ + + + + +CG
Sbjct: 208 IITE---PRKIEGVPFK-VAKAACG 228
Score = 87 (35.7 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 51/199 (25%), Positives = 77/199 (38%)
Query: 185 IAVGAFHNLALQEDGALWAWGNNEYGQLG----TGDTQPRSQP---------IPVQGLSG 231
+A G H L L +DG +++ G+ G G T D+ QP +P + +
Sbjct: 49 VAAGGNHTLLLTQDGEIYSSGDPASGACGLKSATADSAGAGQPRPPVFHKIHVPAEQ-AA 107
Query: 232 LTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSK-MVPQKVNLLAGEDIVQ 290
+ + A W ++ +T E GR FG K P + + + I
Sbjct: 108 QSPGRLIAATWEASIITGPDEQ---GRRNRRVYSFGCGSKGELGQGPLIIRVPFAQPIAN 164
Query: 291 VSCGGTHSVALTRD-GHIFS-FGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDR 348
T V L+ GH+ + GD G GRK G P + I PR +GV
Sbjct: 165 FPPPETEVVGLSACMGHVVAVLSNGDVYGWGNGRKGQLGAPEGI---ITEPRKI-EGVPF 220
Query: 349 RWIAKLVACGGRHTLAIVE 367
+ +AK ACG T + E
Sbjct: 221 K-VAK-AACGKEFTCLVGE 237
Score = 79 (32.9 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 95 AYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCA-PKLIVRQVAAGGTHSVVLTREG 153
A+A G N GQ G + + + A P V QVAAGG H+++LT++G
Sbjct: 4 AFALGSNGSGQLGIGHKEDISVPKPALFSSAAGELSANPTSPVVQVAAGGNHTLLLTQDG 63
Query: 154 HVWTWGQP 161
+++ G P
Sbjct: 64 EIYSSGDP 71
Score = 73 (30.8 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 16/51 (31%), Positives = 24/51 (47%)
Query: 67 QVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTG 117
+++A + +VQ A GG H L + G Y+ G G CG + D G
Sbjct: 37 ELSANPTSPVVQVAAGGNHTLLLTQDGEIYSSGDPASGACGLKSATADSAG 87
Score = 50 (22.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 23/70 (32%), Positives = 32/70 (45%)
Query: 9 AWGSGEDGQLGIGNNEEREWVCVVK-AL----------EPYK-VRSVVAGSRNSLAICDD 56
A GS GQLGIG+ E+ + V K AL P V V AG ++L + D
Sbjct: 6 ALGSNGSGQLGIGHKED---ISVPKPALFSSAAGELSANPTSPVVQVAAGGNHTLLLTQD 62
Query: 57 GKTKTENIPS 66
G+ + P+
Sbjct: 63 GEIYSSGDPA 72
>SGD|S000000018 [details] [associations]
symbol:ATS1 "Protein required for modification of wobble
nucleosides in tRNA" species:4932 "Saccharomyces cerevisiae"
[GO:0007017 "microtubule-based process" evidence=IGI;ISS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=IDA;IPI] [GO:0002098 "tRNA wobble uridine
modification" evidence=IMP] [GO:0000226 "microtubule cytoskeleton
organization" evidence=IGI;IMP] [GO:0007117 "budding cell bud
growth" evidence=IGI;IMP] SGD:S000000018 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0000226 EMBL:L05146 EMBL:BK006935
GO:GO:0007117 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
PIR:S36714 RefSeq:NP_009382.2 ProteinModelPortal:P31386 SMR:P31386
IntAct:P31386 MINT:MINT-2786397 STRING:P31386 PeptideAtlas:P31386
EnsemblFungi:YAL020C GeneID:851213 KEGG:sce:YAL020C CYGD:YAL020c
eggNOG:COG5184 HOGENOM:HOG000163478 KO:K15462 OMA:GAGCATS
OrthoDB:EOG4H75MP NextBio:968094 Genevestigator:P31386
GermOnline:YAL020C GO:GO:0002098 Uniprot:P31386
Length = 333
Score = 130 (50.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 36/114 (31%), Positives = 55/114 (48%)
Query: 201 LWAWGNNEYGQLGTGDTQPRSQPI-PVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRG 259
++A+G+N QLG G + P V G G + IA GG HS LT+DG + G G
Sbjct: 4 VYAFGSNGQRQLGLGHDEDMDTPQRSVPGDDGAIVRKIACGGNHSVMLTNDGNLVGCGDN 63
Query: 260 EHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRG 313
G L D+ ++ + V + +V V+CG +V + DG ++ G G
Sbjct: 64 RRGEL---DSAQALRQVHDWRPVEVPAPVVDVACGWDTTVIVDADGRVWQRGGG 114
Score = 120 (47.3 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 65/228 (28%), Positives = 99/228 (43%)
Query: 100 GNEYGQCGEEPERKDDTGRILR-----RDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGH 154
GN G CG+ + D+ + LR R + +P AP V VA G +V++ +G
Sbjct: 55 GNLVG-CGDNRRGELDSAQALRQVHDWRPVEVP---AP---VVDVACGWDTTVIVDADGR 107
Query: 155 VWTWGQPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGT 214
VW G + Q VP+ E++ + G F N + + ++ WG+N QL
Sbjct: 108 VWQRGGGCY--EFTQQHVPLNSND-ERIAVY--GCFQNFVVVQGTRVYGWGSNTKCQLQE 162
Query: 215 GDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEH--GRLGFGDNDKS 272
++ +P+ V +G VD A G + D+G GR H GRL G K
Sbjct: 163 PKSRSLKEPVLVYD-TGSVAVDYVAMGKDFMVIVDEG-----GRIVHASGRLPTGFELKQ 216
Query: 273 SKMVPQKVNLLAGEDIVQVSCGGTHSVAL--TRDGHIFSFGRGDHGRL 318
+ ++ NL+ V C T S+ L R + SFGRG H +L
Sbjct: 217 QQ---KRHNLV-------VLCMWT-SIHLWNARLNTVESFGRGTHSQL 253
Score = 110 (43.8 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 54/211 (25%), Positives = 88/211 (41%)
Query: 55 DDGKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKD 114
+D T ++P A+ KI A GG H + + + G G N G+
Sbjct: 21 EDMDTPQRSVPGDDGAIVR-KI---ACGGNHSVMLTNDGNLVGCGDNRRGEL-------- 68
Query: 115 DTGRILR-----RDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQ 169
D+ + LR R + +P AP V VA G +V++ +G VW G + Q
Sbjct: 69 DSAQALRQVHDWRPVEVP---AP---VVDVACGWDTTVIVDADGRVWQRGGGCY--EFTQ 120
Query: 170 ISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGL 229
VP+ E++ + G F N + + ++ WG+N QL ++ +P+ V
Sbjct: 121 QHVPLNSND-ERIAVY--GCFQNFVVVQGTRVYGWGSNTKCQLQEPKSRSLKEPVLVYD- 176
Query: 230 SGLTLVDIAAGGWHSTALTDDGE--VYGWGR 258
+G VD A G + D+G V+ GR
Sbjct: 177 TGSVAVDYVAMGKDFMVIVDEGGRIVHASGR 207
Score = 59 (25.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVC-VVKALEPYKVRSVVAGSRNSLAICDDG 57
+ A+GS QLG+G++E+ + V + VR + G +S+ + +DG
Sbjct: 4 VYAFGSNGQRQLGLGHDEDMDTPQRSVPGDDGAIVRKIACGGNHSVMLTNDG 55
Score = 47 (21.6 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 288 IVQVSCGGTHSVALT--RDG--H---IFSFGRGDHGRLG 319
IV V+ G H + T ++G H ++ +G G+HG G
Sbjct: 263 IVGVATGSEHGILTTANQEGKSHCYNVYCWGWGEHGNCG 301
>UNIPROTKB|G4NDH5 [details] [associations]
symbol:MGG_00913 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] INTERPRO:IPR000408 EMBL:CM001235 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS00626 PROSITE:PS50012
RefSeq:XP_003718048.1 ProteinModelPortal:G4NDH5
EnsemblFungi:MGG_00913T0 GeneID:2674805 KEGG:mgr:MGG_00913
Uniprot:G4NDH5
Length = 578
Score = 140 (54.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 76/294 (25%), Positives = 124/294 (42%)
Query: 96 YAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHV 155
YAWG N G+ P+ D+ +I++ IP I+R + V +T EG +
Sbjct: 115 YAWGSNS-GKV-VAPD-SDE--QIIKTPTRIPYFDGK--ILRDLKLDKNFGVAVTEEGDI 167
Query: 156 WTWGQPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQL-GT 214
WG + P P ++G + K +A+ + +AL GA+++ + QL G
Sbjct: 168 VQWGTAYSP--TTTTPTPT-LRGKDVAK-VALSSDRIIALSRSGAVYSLPVAQADQLAGA 223
Query: 215 GDTQ--------PRSQPIPVQGLS------GLTLVDIAAGGWHSTALTDDGEVYGWGRG- 259
T P S I + L+ G +VDI +G H LT G V+
Sbjct: 224 KATAKSGISLWTPSSDSINYRELTPPKLGWGEKVVDIKSGLDHCLMLTSHGRVFSAASST 283
Query: 260 ----EHGRLGF-G----DNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSF 310
G+LG G K P +V L + Q++ G HS+AL ++ ++ ++
Sbjct: 284 ANYPSKGQLGIPGLTWLTRPKGPFDQPHEVKGLPPAGVSQIAAGNYHSLALDKNSNLHAW 343
Query: 311 GRGDHGRLGYGRKVTTGQP-MEVPINIPAPRN-AGDGVDRRWIAKLVACGGRHT 362
G G+LG+ +V P ++ P +P R GV R I +A GG ++
Sbjct: 344 GDNSSGQLGF--EVNPQSPTIDTPKAVPLTRLLTSGGVQRSEITS-IAAGGSNS 394
Score = 138 (53.6 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 70/283 (24%), Positives = 115/283 (40%)
Query: 46 GSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQ 105
GS + + D + P+++ + + +AV ++G WG Y
Sbjct: 118 GSNSGKVVAPDSDEQIIKTPTRIPYFDGKILRDLKLDKNFGVAVTEEGDIVQWG-TAYSP 176
Query: 106 CGEEPE---RKDDTGRI-LRRDIVIPQRCAPKLIVRQVA-AGGTHSVVLTREGHVWTWGQ 160
P R D ++ L D +I + + VA A T + + W
Sbjct: 177 TTTTPTPTLRGKDVAKVALSSDRIIALSRSGAVYSLPVAQADQLAGAKATAKSGISLWTP 236
Query: 161 PWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNN--EY---GQLG-- 213
+ ++++ P G E+V I G H L L G +++ ++ Y GQLG
Sbjct: 237 SSDSINYRELTPPKLGWG-EKVVDIKSGLDHCLMLTSHGRVFSAASSTANYPSKGQLGIP 295
Query: 214 --TGDTQPRS---QPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGD 268
T T+P+ QP V+GL + IAAG +HS AL + ++ WG G+LGF
Sbjct: 296 GLTWLTRPKGPFDQPHEVKGLPPAGVSQIAAGNYHSLALDKNSNLHAWGDNSSGQLGFEV 355
Query: 269 NDKSS-----KMVPQKVNLLAG----EDIVQVSCGGTHSVALT 302
N +S K VP L +G +I ++ GG++S T
Sbjct: 356 NPQSPTIDTPKAVPLTRLLTSGGVQRSEITSIAAGGSNSFFTT 398
Score = 120 (47.3 bits), Expect = 0.00037, P = 0.00037
Identities = 52/159 (32%), Positives = 73/159 (45%)
Query: 152 EGHVWTWGQPW---PPGDIKQISVPVRVQGLEQ--VKLIAVGAFHNLALQEDGALWAWGN 206
+G + G W P G Q P V+GL V IA G +H+LAL ++ L AWG+
Sbjct: 289 KGQLGIPGLTWLTRPKGPFDQ---PHEVKGLPPAGVSQIAAGNYHSLALDKNSNLHAWGD 345
Query: 207 NEYGQLG--------TGDTQPRSQPIP----VQGLSGLTLVDIAAGGWHS----TALTDD 250
N GQLG T DT P++ P+ G+ + IAAGG +S +++ +
Sbjct: 346 NSSGQLGFEVNPQSPTIDT-PKAVPLTRLLTSGGVQRSEITSIAAGGSNSFFTTSSIPAN 404
Query: 251 G----EVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAG 285
G E + G G G LG G S P K+ L+G
Sbjct: 405 GRPTAEAWSCGAGLQGELGNGKWIHMST-APAKMKALSG 442
>CGD|CAL0001436 [details] [associations]
symbol:ATS1 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0002098 "tRNA
wobble uridine modification" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=IEA] [GO:0007117 "budding cell
bud growth" evidence=IEA] INTERPRO:IPR000408 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AACQ01000073 PRINTS:PR00633
PROSITE:PS00626 eggNOG:COG5184 KO:K15462 RefSeq:XP_716156.1
ProteinModelPortal:Q5A364 STRING:Q5A364 GeneID:3642213
KEGG:cal:CaO19.13757 CGD:CAL0062057 Uniprot:Q5A364
Length = 336
Score = 136 (52.9 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 42/131 (32%), Positives = 61/131 (46%)
Query: 201 LWAWGNNEYGQLG-TGDTQPRSQPIPVQGLSGLTLVD-------IAAGGWHSTALTDDGE 252
L A G+N QLG D S + + + G + IA GG H+ + D+GE
Sbjct: 4 LLACGSNGNYQLGINNDEDQNSLKVTLFDIDGTMSSEVPGKPMKIAGGGNHTMVILDNGE 63
Query: 253 VYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGR 312
V+ G E G+ G + S V KV G D + +SCG S+ + R G ++ GR
Sbjct: 64 VFSCGSNEFGQCGLPRGE--SLGVFHKV---PGNDWLDISCGWEFSILVKRSGEVYVCGR 118
Query: 313 GDHGRLGYGRK 323
G G LG G++
Sbjct: 119 GLKGELGLGKE 129
Score = 118 (46.6 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 54/254 (21%), Positives = 104/254 (40%)
Query: 75 KIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKL 134
K ++ A GG H + + D G ++ G NE+GQCG P R + G + + P
Sbjct: 44 KPMKIAGGGNHTMVILDNGEVFSCGSNEFGQCGL-P-RGESLG-VFHK--------VPGN 92
Query: 135 IVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI--------KQISVPVRVQGLEQVKLIA 186
++ G S+++ R G V+ G+ G++ ++ V G +++K
Sbjct: 93 DWLDISCGWEFSILVKRSGEVYVCGRGLK-GELGLGKETPESELIYSTTVDGFKEIK--- 148
Query: 187 VGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTA 246
+ +Q L WGN+ GQLG +T+ + P G+ D + G +
Sbjct: 149 -SCMQHTIIQTTNGLVGWGNSRKGQLG--ETEDKIMWTPKTLRFGVVCKDFSLGREFTAI 205
Query: 247 LTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGH 306
TD V +G+ + + + M V++L+ +++Q +H +
Sbjct: 206 QTDTNRVKIFGKSSIKNIPESTVARVAAMW-SSVHILSETNVLQSFGNNSHDQLFPNNSS 264
Query: 307 I----FSFGRGDHG 316
+ ++ G +HG
Sbjct: 265 VAVEEYAIG-SEHG 277
Score = 55 (24.4 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 16/60 (26%), Positives = 31/60 (51%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCV--------VKALEPYKVRSVVAGSRNSLAICDDGK 58
++A GS + QLGI N+E++ + V + + P K + G +++ I D+G+
Sbjct: 4 LLACGSNGNYQLGINNDEDQNSLKVTLFDIDGTMSSEVPGKPMKIAGGGNHTMVILDNGE 63
>UNIPROTKB|Q5A364 [details] [associations]
symbol:ATS1 "Putative uncharacterized protein ATS1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] INTERPRO:IPR000408
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:AACQ01000073 PRINTS:PR00633 PROSITE:PS00626 eggNOG:COG5184
KO:K15462 RefSeq:XP_716156.1 ProteinModelPortal:Q5A364
STRING:Q5A364 GeneID:3642213 KEGG:cal:CaO19.13757 CGD:CAL0062057
Uniprot:Q5A364
Length = 336
Score = 136 (52.9 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 42/131 (32%), Positives = 61/131 (46%)
Query: 201 LWAWGNNEYGQLG-TGDTQPRSQPIPVQGLSGLTLVD-------IAAGGWHSTALTDDGE 252
L A G+N QLG D S + + + G + IA GG H+ + D+GE
Sbjct: 4 LLACGSNGNYQLGINNDEDQNSLKVTLFDIDGTMSSEVPGKPMKIAGGGNHTMVILDNGE 63
Query: 253 VYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGR 312
V+ G E G+ G + S V KV G D + +SCG S+ + R G ++ GR
Sbjct: 64 VFSCGSNEFGQCGLPRGE--SLGVFHKV---PGNDWLDISCGWEFSILVKRSGEVYVCGR 118
Query: 313 GDHGRLGYGRK 323
G G LG G++
Sbjct: 119 GLKGELGLGKE 129
Score = 118 (46.6 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 54/254 (21%), Positives = 104/254 (40%)
Query: 75 KIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKL 134
K ++ A GG H + + D G ++ G NE+GQCG P R + G + + P
Sbjct: 44 KPMKIAGGGNHTMVILDNGEVFSCGSNEFGQCGL-P-RGESLG-VFHK--------VPGN 92
Query: 135 IVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI--------KQISVPVRVQGLEQVKLIA 186
++ G S+++ R G V+ G+ G++ ++ V G +++K
Sbjct: 93 DWLDISCGWEFSILVKRSGEVYVCGRGLK-GELGLGKETPESELIYSTTVDGFKEIK--- 148
Query: 187 VGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTA 246
+ +Q L WGN+ GQLG +T+ + P G+ D + G +
Sbjct: 149 -SCMQHTIIQTTNGLVGWGNSRKGQLG--ETEDKIMWTPKTLRFGVVCKDFSLGREFTAI 205
Query: 247 LTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGH 306
TD V +G+ + + + M V++L+ +++Q +H +
Sbjct: 206 QTDTNRVKIFGKSSIKNIPESTVARVAAMW-SSVHILSETNVLQSFGNNSHDQLFPNNSS 264
Query: 307 I----FSFGRGDHG 316
+ ++ G +HG
Sbjct: 265 VAVEEYAIG-SEHG 277
Score = 55 (24.4 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 16/60 (26%), Positives = 31/60 (51%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCV--------VKALEPYKVRSVVAGSRNSLAICDDGK 58
++A GS + QLGI N+E++ + V + + P K + G +++ I D+G+
Sbjct: 4 LLACGSNGNYQLGINNDEDQNSLKVTLFDIDGTMSSEVPGKPMKIAGGGNHTMVILDNGE 63
>FB|FBgn0037116 [details] [associations]
symbol:CG7158 species:7227 "Drosophila melanogaster"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0017112 "Rab
guanyl-nucleotide exchange factor activity" evidence=ISS]
[GO:0031982 "vesicle" evidence=ISS] [GO:0035011 "melanotic
encapsulation of foreign target" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 EMBL:AE014296 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 eggNOG:COG4642
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 KO:K04575
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0035011 EMBL:AY061403
RefSeq:NP_649347.1 UniGene:Dm.3610 SMR:Q9VNZ8 IntAct:Q9VNZ8
MINT:MINT-1031217 EnsemblMetazoa:FBtr0078462 GeneID:40410
KEGG:dme:Dmel_CG7158 UCSC:CG7158-RA FlyBase:FBgn0037116
InParanoid:Q9VNZ8 OMA:HWFILFN OrthoDB:EOG4S7H4T GenomeRNAi:40410
NextBio:818636 Uniprot:Q9VNZ8
Length = 1486
Score = 139 (54.0 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 38/114 (33%), Positives = 57/114 (50%)
Query: 201 LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGE 260
L+ +G + G LG+GD R+ + +Q L + + IAAG H+ A T DG +Y WG
Sbjct: 259 LFTFGASNNGLLGSGDHIRRANVMRLQKLDSMGVCSIAAGLEHTVARTLDGRLYHWGLNN 318
Query: 261 HGRLGFGDNDKSSKM---VPQKVNLLAGED--IVQVSCGGTHSVALTRDGHIFS 309
H +LG D SS M + + L E ++ +CG H++ L G I S
Sbjct: 319 HSQLG---EDVSSPMEITITENTAALPIEQNSALEATCGDYHTLLLNASGQIHS 369
>CGD|CAL0006023 [details] [associations]
symbol:orf19.2938 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0031305 "integral to
mitochondrial inner membrane" evidence=IEA] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IEA] CGD:CAL0006023 INTERPRO:IPR000408 Pfam:PF00415
EMBL:AACQ01000017 EMBL:AACQ01000015 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 eggNOG:COG5184
RefSeq:XP_721165.1 RefSeq:XP_721437.1 GeneID:3636853 GeneID:3637068
KEGG:cal:CaO19.10455 KEGG:cal:CaO19.2938 Uniprot:Q5AIB5
Length = 673
Score = 80 (33.2 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 185 IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIP 225
I+ G + N+ ++G +W WG+N GQ G +T +P+P
Sbjct: 430 ISSGKYFNIVSDDNGNIWTWGDNSCGQCGDINTTDL-KPVP 469
Score = 77 (32.2 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 30/127 (23%), Positives = 60/127 (47%)
Query: 252 EVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHS-VALTRDGH---I 307
+V W +G + D+SS V + + + +DI S G H + L GH +
Sbjct: 536 QVCCWPEIVKSLIGLNEFDESSNSV-KPITI---KDI---SVGNKHLFITLNNVGHHKDV 588
Query: 308 FSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIV- 366
++ G + G+ G G++ + +PM++P + P DG D+ + K + L+++
Sbjct: 589 YALGENESGQQGNGKRNKSCKPMKIP-KLIEPE---DGKDKLQLVKNLHDVNTKRLSLLN 644
Query: 367 EWQTEES 373
EW+ ++
Sbjct: 645 EWEISKN 651
Score = 64 (27.6 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 10/39 (25%), Positives = 22/39 (56%)
Query: 145 HSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEQVK 183
H + +T +G V+ W + W D++ I++P ++ + K
Sbjct: 257 HLIAITDKGKVYEWDKDW--SDVRPINLPFNIERVTPTK 293
Score = 60 (26.2 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 64 IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAW 98
IP ++ +N + A I H +A+ D+G+ Y W
Sbjct: 236 IPLRIPFFNNMYLKDAYIEKGHLIAITDKGKVYEW 270
>UNIPROTKB|Q5AIB5 [details] [associations]
symbol:FMP25 "Potential mitochondrial protein Fmp25"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] CGD:CAL0006023 INTERPRO:IPR000408
Pfam:PF00415 EMBL:AACQ01000017 EMBL:AACQ01000015 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 eggNOG:COG5184
RefSeq:XP_721165.1 RefSeq:XP_721437.1 GeneID:3636853 GeneID:3637068
KEGG:cal:CaO19.10455 KEGG:cal:CaO19.2938 Uniprot:Q5AIB5
Length = 673
Score = 80 (33.2 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 185 IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIP 225
I+ G + N+ ++G +W WG+N GQ G +T +P+P
Sbjct: 430 ISSGKYFNIVSDDNGNIWTWGDNSCGQCGDINTTDL-KPVP 469
Score = 77 (32.2 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 30/127 (23%), Positives = 60/127 (47%)
Query: 252 EVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHS-VALTRDGH---I 307
+V W +G + D+SS V + + + +DI S G H + L GH +
Sbjct: 536 QVCCWPEIVKSLIGLNEFDESSNSV-KPITI---KDI---SVGNKHLFITLNNVGHHKDV 588
Query: 308 FSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIV- 366
++ G + G+ G G++ + +PM++P + P DG D+ + K + L+++
Sbjct: 589 YALGENESGQQGNGKRNKSCKPMKIP-KLIEPE---DGKDKLQLVKNLHDVNTKRLSLLN 644
Query: 367 EWQTEES 373
EW+ ++
Sbjct: 645 EWEISKN 651
Score = 64 (27.6 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 10/39 (25%), Positives = 22/39 (56%)
Query: 145 HSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEQVK 183
H + +T +G V+ W + W D++ I++P ++ + K
Sbjct: 257 HLIAITDKGKVYEWDKDW--SDVRPINLPFNIERVTPTK 293
Score = 60 (26.2 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 64 IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAW 98
IP ++ +N + A I H +A+ D+G+ Y W
Sbjct: 236 IPLRIPFFNNMYLKDAYIEKGHLIAITDKGKVYEW 270
>ASPGD|ASPL0000075377 [details] [associations]
symbol:AN10609 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IEA] [GO:0031305 "integral to mitochondrial inner
membrane" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:BN001303
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
EnsemblFungi:CADANIAT00005518 HOGENOM:HOG000197481 OMA:QRIECGR
Uniprot:C8V9T3
Length = 575
Score = 130 (50.8 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 59/252 (23%), Positives = 104/252 (41%)
Query: 96 YAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHV 155
Y WG N+Y +PE K+ + RR ++R + G T + G +
Sbjct: 112 YIWGNNKYRVV--DPESKESVIKTPRRLSYFDSN-----VLRDLKLGETSGAAIIENGDL 164
Query: 156 WTWGQPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHN--LALQEDGALWAWGNNEYGQLG 213
WG+ + + K P + L LI++ H+ +AL DG +++ +++ Q
Sbjct: 165 VQWGKGYSETEFK----PTKT--LTGKNLISLSMSHDRIVALSSDGKVYSLPVSKHDQTS 218
Query: 214 TGDTQPRSQPIPVQ-GLSGLT-------------LVDIAAGGWHSTALTDDGEVYGW-GR 258
+ +S +P G S ++ +V I+ G H LT G V+
Sbjct: 219 GKKAEEKSW-LPFSSGKSSMSYRLIQPILKLGEKIVAISGGLEHVLLLTSSGRVFSAVSS 277
Query: 259 GEH----GRLG-----FGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFS 309
E+ G+LG + P +V G + Q++ G HS+ LT++G++ +
Sbjct: 278 TENFPSFGQLGVPGLTWATRPPGPVDAPHEVKTPNGVKVAQIATGDYHSLLLTKNGNVLA 337
Query: 310 FGRGDHGRLGYG 321
FG G+LG G
Sbjct: 338 FGDNSFGQLGLG 349
Score = 41 (19.5 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 310 FGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKL 354
+G +H +LG G++ +P IN+ +P +D + +A+L
Sbjct: 500 WGGNEHFQLGTGKRSNLSKPAH--INV-SPETVS--LDDKELARL 539
Score = 37 (18.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 307 IFSFGRGDHGRLGYGR 322
I++ GRG G LG G+
Sbjct: 413 IWTCGRGIWGALGNGK 428
>UNIPROTKB|I3LMD9 [details] [associations]
symbol:FBXO24 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001810 InterPro:IPR018527 PROSITE:PS00202
PROSITE:PS50181 SMART:SM00256 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0046872 SUPFAM:SSF81383 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 OMA:EPTQVHY
GeneTree:ENSGT00390000017455 EMBL:FP565722
Ensembl:ENSSSCT00000031465 Uniprot:I3LMD9
Length = 616
Score = 123 (48.4 bits), Expect = 0.00019, P = 0.00019
Identities = 58/215 (26%), Positives = 96/215 (44%)
Query: 87 LAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHS 146
L + ++G+ Y+ NE Q ++P + T ++ R + RC P L V +A+ + +
Sbjct: 298 LLLTEEGKIYSLVVNET-QL-DQP--RSYTVQLALRKV---SRCLPHLRVACMASNQSST 350
Query: 147 VVLTREGHVWTWGQPWPPGDIKQI------------SVPVRVQGLEQVKLIAVGAFHNLA 194
+ +T +G V+ + PG + + +P+ + ++ A+G H
Sbjct: 351 LYITDQGGVYF--EVHTPGVYRDLFGTLQAFDPLDQQMPLALSLPAKILFCALGYNHLGL 408
Query: 195 LQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDG--- 251
+ E G ++ GNN YGQLGTGD R +P V L + + G HS L+
Sbjct: 409 VDEFGRIFMQGNNRYGQLGTGDKMDRGEPTQVHYLQ--RPIALWCGLNHSLVLSQGSDFS 466
Query: 252 -EVYGWGRGEHGRL-GFGDNDKSSKMVPQKVNLLA 284
E+ G G G GRL G+ S + KV L A
Sbjct: 467 KELLGCGCGAGGRLPGWPKGSASFVKLHVKVPLCA 501
>CGD|CAL0000172 [details] [associations]
symbol:orf19.7574 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
SMART:SM00248 CGD:CAL0000172 INTERPRO:IPR000408 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AACQ01000032
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_719336.1
ProteinModelPortal:Q5ACR8 GeneID:3638930 KEGG:cal:CaO19.7574
HOGENOM:HOG000094547 Uniprot:Q5ACR8
Length = 1439
Score = 130 (50.8 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 25/77 (32%), Positives = 41/77 (53%)
Query: 243 HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALT 302
HS +T DGE++ G G GRLG G D ++ +++ + I V+ HS+ALT
Sbjct: 240 HSVVVTQDGELFSCGVGSRGRLGHGLTDLNNYFKFKRIEFFNDKTIKDVAISSNHSIALT 299
Query: 303 RDGHIFSFGRGDHGRLG 319
D ++++G +LG
Sbjct: 300 TDNEVYAWGLNSFNQLG 316
Score = 43 (20.2 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 5 TSIIAWGSGEDGQLGIGNNEER 26
+ I +G + QLG+G++ +R
Sbjct: 180 SEIYVFGCNSNNQLGVGDSTDR 201
>UNIPROTKB|Q5ACR8 [details] [associations]
symbol:CaO19.7574 "Potential ankyrin repeat protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
SMART:SM00248 CGD:CAL0000172 INTERPRO:IPR000408 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AACQ01000032
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_719336.1
ProteinModelPortal:Q5ACR8 GeneID:3638930 KEGG:cal:CaO19.7574
HOGENOM:HOG000094547 Uniprot:Q5ACR8
Length = 1439
Score = 130 (50.8 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 25/77 (32%), Positives = 41/77 (53%)
Query: 243 HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALT 302
HS +T DGE++ G G GRLG G D ++ +++ + I V+ HS+ALT
Sbjct: 240 HSVVVTQDGELFSCGVGSRGRLGHGLTDLNNYFKFKRIEFFNDKTIKDVAISSNHSIALT 299
Query: 303 RDGHIFSFGRGDHGRLG 319
D ++++G +LG
Sbjct: 300 TDNEVYAWGLNSFNQLG 316
Score = 43 (20.2 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 5 TSIIAWGSGEDGQLGIGNNEER 26
+ I +G + QLG+G++ +R
Sbjct: 180 SEIYVFGCNSNNQLGVGDSTDR 201
>UNIPROTKB|Q8CMJ0 [details] [associations]
symbol:Q8CMJ0 "Expressed lipoprotein" species:211586
"Shewanella oneidensis MR-1" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 HSSP:O87916
EMBL:AE014300 GenomeReviews:AE014300_GR RefSeq:NP_720437.1
RefSeq:NP_720439.1 ProteinModelPortal:Q8CMJ0 GeneID:1172535
GeneID:1172538 KEGG:son:SO_A0112 KEGG:son:SO_A0115 PATRIC:23529382
HOGENOM:HOG000147906 OMA:VTWGNSG ProtClustDB:CLSK576353
Uniprot:Q8CMJ0
Length = 1410
Score = 102 (41.0 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 51/177 (28%), Positives = 80/177 (45%)
Query: 152 EGHVWTWGQPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQ 211
+G V TWG GD ++ + G++ + + GAF A++EDG++ WGN+ G
Sbjct: 1124 DGSVVTWGGSSYGGDSSSVAGQL-TSGVKVIYSNS-GAF--AAVKEDGSVVTWGNSGAG- 1178
Query: 212 LGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDK 271
GD S + Q SG+ ++D + A+ +DG V WG G GD
Sbjct: 1179 ---GD----SSRVAGQLTSGVKVIDSTNNAF--AAVKEDGSVVTWGNSGAG----GD--- 1222
Query: 272 SSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQ 328
SS + Q L +G ++ S + A+ DG + ++G D G G V GQ
Sbjct: 1223 SSSVAGQ---LTSGVKVIY-STNNAFA-AVKEDGSVVTWG--DSGAGGDSSSVA-GQ 1271
Score = 70 (29.7 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 24/102 (23%), Positives = 43/102 (42%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKT--KTEN 63
S++ WGS DG G ++ + VK + Y S A + ++ G + +
Sbjct: 1041 SVVTWGSYYDG--GDSSSVAGQLTSGVKVI--YSTGSAFAAVKEDGSVVTWGSYGGNSSS 1096
Query: 64 IPSQVNALSNTKIVQAAIGGWHCLA-VDDQGRAYAWGGNEYG 104
+ Q+ S K++ + + A V + G WGG+ YG
Sbjct: 1097 VAGQLT--SGVKVIYSTDNVFGAFAAVKEDGSVVTWGGSSYG 1136
>TIGR_CMR|SO_A0112 [details] [associations]
symbol:SO_A0112 "expressed lipoprotein" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 HSSP:O87916
EMBL:AE014300 GenomeReviews:AE014300_GR RefSeq:NP_720437.1
RefSeq:NP_720439.1 ProteinModelPortal:Q8CMJ0 GeneID:1172535
GeneID:1172538 KEGG:son:SO_A0112 KEGG:son:SO_A0115 PATRIC:23529382
HOGENOM:HOG000147906 OMA:VTWGNSG ProtClustDB:CLSK576353
Uniprot:Q8CMJ0
Length = 1410
Score = 102 (41.0 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 51/177 (28%), Positives = 80/177 (45%)
Query: 152 EGHVWTWGQPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQ 211
+G V TWG GD ++ + G++ + + GAF A++EDG++ WGN+ G
Sbjct: 1124 DGSVVTWGGSSYGGDSSSVAGQL-TSGVKVIYSNS-GAF--AAVKEDGSVVTWGNSGAG- 1178
Query: 212 LGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDK 271
GD S + Q SG+ ++D + A+ +DG V WG G GD
Sbjct: 1179 ---GD----SSRVAGQLTSGVKVIDSTNNAF--AAVKEDGSVVTWGNSGAG----GD--- 1222
Query: 272 SSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQ 328
SS + Q L +G ++ S + A+ DG + ++G D G G V GQ
Sbjct: 1223 SSSVAGQ---LTSGVKVIY-STNNAFA-AVKEDGSVVTWG--DSGAGGDSSSVA-GQ 1271
Score = 70 (29.7 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 24/102 (23%), Positives = 43/102 (42%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKT--KTEN 63
S++ WGS DG G ++ + VK + Y S A + ++ G + +
Sbjct: 1041 SVVTWGSYYDG--GDSSSVAGQLTSGVKVI--YSTGSAFAAVKEDGSVVTWGSYGGNSSS 1096
Query: 64 IPSQVNALSNTKIVQAAIGGWHCLA-VDDQGRAYAWGGNEYG 104
+ Q+ S K++ + + A V + G WGG+ YG
Sbjct: 1097 VAGQLT--SGVKVIYSTDNVFGAFAAVKEDGSVVTWGGSSYG 1136
>TIGR_CMR|SO_A0115 [details] [associations]
symbol:SO_A0115 "expressed lipoprotein" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 HSSP:O87916
EMBL:AE014300 GenomeReviews:AE014300_GR RefSeq:NP_720437.1
RefSeq:NP_720439.1 ProteinModelPortal:Q8CMJ0 GeneID:1172535
GeneID:1172538 KEGG:son:SO_A0112 KEGG:son:SO_A0115 PATRIC:23529382
HOGENOM:HOG000147906 OMA:VTWGNSG ProtClustDB:CLSK576353
Uniprot:Q8CMJ0
Length = 1410
Score = 102 (41.0 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 51/177 (28%), Positives = 80/177 (45%)
Query: 152 EGHVWTWGQPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQ 211
+G V TWG GD ++ + G++ + + GAF A++EDG++ WGN+ G
Sbjct: 1124 DGSVVTWGGSSYGGDSSSVAGQL-TSGVKVIYSNS-GAF--AAVKEDGSVVTWGNSGAG- 1178
Query: 212 LGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDK 271
GD S + Q SG+ ++D + A+ +DG V WG G GD
Sbjct: 1179 ---GD----SSRVAGQLTSGVKVIDSTNNAF--AAVKEDGSVVTWGNSGAG----GD--- 1222
Query: 272 SSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQ 328
SS + Q L +G ++ S + A+ DG + ++G D G G V GQ
Sbjct: 1223 SSSVAGQ---LTSGVKVIY-STNNAFA-AVKEDGSVVTWG--DSGAGGDSSSVA-GQ 1271
Score = 70 (29.7 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 24/102 (23%), Positives = 43/102 (42%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKT--KTEN 63
S++ WGS DG G ++ + VK + Y S A + ++ G + +
Sbjct: 1041 SVVTWGSYYDG--GDSSSVAGQLTSGVKVI--YSTGSAFAAVKEDGSVVTWGSYGGNSSS 1096
Query: 64 IPSQVNALSNTKIVQAAIGGWHCLA-VDDQGRAYAWGGNEYG 104
+ Q+ S K++ + + A V + G WGG+ YG
Sbjct: 1097 VAGQLT--SGVKVIYSTDNVFGAFAAVKEDGSVVTWGGSSYG 1136
>UNIPROTKB|Q2KFY7 [details] [associations]
symbol:MGCH7_ch7g548 "Putative uncharacterized protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001525 Pfam:PF00145
PRINTS:PR00105 GO:GO:0003677 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0006306 GO:GO:0008168 EMBL:CM000230
PANTHER:PTHR10629 ProteinModelPortal:Q2KFY7 Uniprot:Q2KFY7
Length = 877
Score = 120 (47.3 bits), Expect = 0.00064, P = 0.00064
Identities = 33/117 (28%), Positives = 52/117 (44%)
Query: 185 IAVGAFHNLALQEDGALWAWGNNEYGQLGTG-DTQPRSQPIPVQGLSGLTLVDIAA-GGW 242
+A G+ H+LA EDG + AWG + Q+G + PR +++I
Sbjct: 1 MAAGSHHSLACTEDGRVLAWGRCDDSQMGVALNNIPRDH-FKFDSAQRPRILNIPTLVPD 59
Query: 243 HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSV 299
+S A+++D E +GWG G G D K + G+ + V CGG S+
Sbjct: 60 NSMAISEDEEHFGWGFSSEYSTGLGTEDTVEKPAVARRGDTTGKMVSFVGCGGQFSI 116
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.136 0.433 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 374 374 0.00087 117 3 11 22 0.44 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 234
No. of states in DFA: 620 (66 KB)
Total size of DFA: 266 KB (2138 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.23u 0.23s 29.46t Elapsed: 00:00:01
Total cpu time: 29.41u 0.24s 29.65t Elapsed: 00:00:02
Start: Sat May 11 14:54:55 2013 End: Sat May 11 14:54:57 2013
WARNINGS ISSUED: 1