BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038610
(374 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1
SV=1
Length = 440
Score = 167 bits (424), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 117/351 (33%), Positives = 183/351 (52%), Gaps = 43/351 (12%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDG--------- 57
+ +WG GEDGQLG G+ E+R + AL+ +++ SV G+ +++A G
Sbjct: 36 VCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWG 95
Query: 58 --------KTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 109
+ P + AL +I Q A G HCLAV +G +WG N+ GQ G
Sbjct: 96 DFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLG-- 153
Query: 110 PERKDDTGRILRRDIVIPQR--CAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPP--- 164
DT D ++PQ+ + ++ VAAG H+ +T +G ++ WG W
Sbjct: 154 ---LGDT-----EDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWG--WGRYGN 203
Query: 165 ---GDIKQISVPVRVQ--GLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQP 219
GD VP RV G E++ ++A G H +++ GAL+ +G ++YGQLG GD +
Sbjct: 204 LGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLED 263
Query: 220 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDN-DKSSKMVPQ 278
P ++ LS + I+ G H+ ALT DG++YGWG + G++G G+N D+ S P
Sbjct: 264 HLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCS---PV 320
Query: 279 KVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQP 329
+V + +VQVSCG H++A+T ++F++GRG +G+LG G V P
Sbjct: 321 QVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFP 371
Score = 125 bits (313), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 151/300 (50%), Gaps = 31/300 (10%)
Query: 75 KIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE-EPERKDDTGRILRRDIVIPQRCAPK 133
K++ + G H +A+ +WG E GQ G + E + ++ D
Sbjct: 16 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALD---------G 66
Query: 134 LIVRQVAAGGTHSVVLTREG---HVWTWGQ--PWPPGDIKQISVPVRVQGLE--QVKLIA 186
+ V G H+V ++ G + W WG G+ + P+ ++ L ++K IA
Sbjct: 67 HQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIA 126
Query: 187 VGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTA 246
G H LA+ +G + +WG N+ GQLG GDT+ P +Q G+ + +AAG H+ A
Sbjct: 127 CGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAA 186
Query: 247 LTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGH 306
+T+DG++YGWG G +G LG G D++ ++VP++V GE + V+CG H+++++ G
Sbjct: 187 VTEDGDLYGWGWGRYGNLGLG--DRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 244
Query: 307 IFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIV 366
++++G +G+LG+G + +P + A N+ ++ G RHT+A+
Sbjct: 245 LYTYGWSKYGQLGHGDL----EDHLIPHKLEALSNS--------FISQISGGWRHTMALT 292
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 131/253 (51%), Gaps = 21/253 (8%)
Query: 120 LRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVR 175
+ D+ + AP V ++AG +HSV L V +WG+ GD + P +
Sbjct: 1 MAEDMAADEVTAPPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQ 60
Query: 176 VQGLE--QVKLIAVGAFHNLALQEDGA-LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGL 232
+ L+ Q+ + GA H +A + G +++WG ++G+LG G++ P+P++ L G+
Sbjct: 61 LSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGI 120
Query: 233 TLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVS 292
+ IA G H A+T +GEV WGR ++G+LG GD + S +VPQK+ G I V+
Sbjct: 121 RIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDS--LVPQKIQAFEGIRIKMVA 178
Query: 293 CGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIA 352
G H+ A+T DG ++ +G G +G LG G + P V G+ +
Sbjct: 179 AGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERV------TSTGGEKM------ 226
Query: 353 KLVACGGRHTLAI 365
+VACG RHT+++
Sbjct: 227 SMVACGWRHTISV 239
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 139/293 (47%), Gaps = 38/293 (12%)
Query: 3 STTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK---- 58
S + +WG G+ G+LG GN+ + +KAL +++ + G + LA+ +G+
Sbjct: 85 SGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSW 144
Query: 59 ------------TKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQC 106
T+ +P ++ A +I A G H AV + G Y WG YG
Sbjct: 145 GRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNL 204
Query: 107 GEEPERKDDTGRILRRDIVIPQRCAPK--LIVRQVAAGGTHSVVLTREGHVWTWGQPWPP 164
G R D ++P+R + VA G H++ ++ G ++T+G W
Sbjct: 205 GLGD----------RTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYG--WSK 252
Query: 165 ------GDIKQISVPVRVQGLEQ--VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGD 216
GD++ +P +++ L + I+ G H +AL DG L+ WG N++GQ+G G+
Sbjct: 253 YGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGN 312
Query: 217 TQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDN 269
+ P+ V+ +V ++ G H+ A+T+ V+ WGRG +G+LG G++
Sbjct: 313 NLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGES 365
Score = 89.0 bits (219), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 123/258 (47%), Gaps = 38/258 (14%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKT------- 59
+ +WG ++GQLG+G+ E+ ++A E +++ V AG+ ++ A+ +DG
Sbjct: 141 VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGR 200
Query: 60 --------KTEN-IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEP 110
+T+ +P +V + K+ A G H ++V G Y +G ++YGQ G
Sbjct: 201 YGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGD 260
Query: 111 ERKDDTGRILRRDIVIPQR--CAPKLIVRQVAAGGTHSVVLTREGHVWTWG-----QPWP 163
D +IP + + Q++ G H++ LT +G ++ WG Q
Sbjct: 261 ----------LEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGV 310
Query: 164 PGDIKQIS-VPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ 222
++ Q S V VR ++V ++ G H LA+ E ++AWG GQLG G++ R+
Sbjct: 311 GNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNF 370
Query: 223 PIPVQGLSGLTLVDIAAG 240
P ++ LS VD A+G
Sbjct: 371 PKIIEALS----VDGASG 384
Score = 32.3 bits (72), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 5 TSIIAWGSGEDGQLGIGNNEEREWVCVVKAL 35
++ AWG G +GQLGIG + +R + +++AL
Sbjct: 347 NNVFAWGRGTNGQLGIGESVDRNFPKIIEAL 377
>sp|Q6PAV2|HERC4_MOUSE Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4
PE=2 SV=2
Length = 1057
Score = 159 bits (402), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/310 (33%), Positives = 160/310 (51%), Gaps = 32/310 (10%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P + + N K+ G H + V D G Y G N+ GQ G E RK +++ D
Sbjct: 25 PRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPE-QVVALD- 82
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG-----QPWPPGDIKQISVPVRVQGL 179
A ++ VA G H++ L +G V+ WG Q G + I VP ++ L
Sbjct: 83 ------AQNIVA--VACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL 134
Query: 180 EQVKLI--AVGAFHNLALQEDGALWAWGNNEYGQLGTG-DTQPRSQPIPVQGLSGLTLVD 236
++++ A G +H+LAL + ++ WG N+YGQLG G D Q ++ P ++ L G+ +
Sbjct: 135 SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQ 194
Query: 237 IAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGT 296
+AAGG HS LT G ++GWGR + G+LG ND++ + VP + L + IV + CG
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL--NDENDRYVPNLLKSLRSQKIVYICCGED 252
Query: 297 HSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVA 356
H+ ALT++G +F+FG G +G+LG+ +T + PR + + I VA
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHN---STSHEIN-------PRKVFELMGS--IVTQVA 300
Query: 357 CGGRHTLAIV 366
CG +HT A V
Sbjct: 301 CGRQHTSAFV 310
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/356 (32%), Positives = 170/356 (47%), Gaps = 45/356 (12%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEP--------YKVRSVVAGSRNSLAICDDGK 58
++ WG+ GQLG+G +E LEP KVR V G R+++ + DDG
Sbjct: 1 MLCWGNASYGQLGLGGIDEE------IVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGT 54
Query: 59 T--------------KTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYG 104
K+ P QV AL IV A G H LA++D+G+ YAWG + G
Sbjct: 55 VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDG 114
Query: 105 QCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPP 164
Q G + ++ R+ R + + + QVA G HS+ L++ V+ WGQ
Sbjct: 115 QLG--LQGSEECIRVPRN-----IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167
Query: 165 G-----DIKQISVPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDT 217
D ++ + P ++ L + +A G H+ L GA++ WG N++GQLG D
Sbjct: 168 QLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 218 QPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVP 277
R P ++ L +V I G H+ ALT +G V+ +G G +G+L G N S ++ P
Sbjct: 228 NDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQL--GHNSTSHEINP 285
Query: 278 QKVNLLAGEDIVQVSCGGTHSVALT-RDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
+KV L G + QV+CG H+ A G I+SFG G +G+LG G P V
Sbjct: 286 RKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 92/236 (38%), Gaps = 52/236 (22%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTK 60
++ + + WG + GQLG+G + ++
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCQK---------------------------------- 177
Query: 61 TENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRIL 120
+ P + +L +Q A GG H + G + WG N++GQ G E +L
Sbjct: 178 -QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236
Query: 121 RRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWT-----WGQPWPPGDIKQISVPVR 175
+ + Q+ + + G H+ LT+EG V+T +GQ +I+ P +
Sbjct: 237 KS--LRSQK------IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN-PRK 287
Query: 176 VQGL--EQVKLIAVGAFHNLAL-QEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQG 228
V L V +A G H A G ++++G GQLGTG T R P V+G
Sbjct: 288 VFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 14/110 (12%)
Query: 256 WGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDH 315
WG +G+LG G D+ + P++ + + + V CG H+V + DG +++ G D
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 316 GRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
G+LG+ + + +P +V +D + I VACG HTLA+
Sbjct: 64 GQLGHEK--SRKKPEQVV-----------ALDAQNIVA-VACGEAHTLAL 99
>sp|Q5PQN1|HERC4_RAT Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus
GN=Herc4 PE=2 SV=1
Length = 1057
Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/368 (30%), Positives = 175/368 (47%), Gaps = 66/368 (17%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKTENIPS 66
++ WG+ GQLG+G +E LEP K V
Sbjct: 1 MLCWGNASYGQLGLGGIDEE------IVLEPRKSDFFV---------------------- 32
Query: 67 QVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVI 126
N K+ G H + V D G Y G N+ GQ G E RK +++ D
Sbjct: 33 ------NKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPE-QVVALD--- 82
Query: 127 PQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG-----QPWPPGDIKQISVPVRVQGLEQ 181
A ++ V+ G H++ L +G V+ WG Q G + I VP ++ L
Sbjct: 83 ----AQNIVA--VSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSD 136
Query: 182 VKLI--AVGAFHNLALQEDGALWAWGNNEYGQLGTG-DTQPRSQPIPVQGLSGLTLVDIA 238
++++ A G +H+LAL + ++ WG N+YGQLG G + Q ++ P ++ L G+ + +A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVA 196
Query: 239 AGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHS 298
AGG HS LT G ++GWGR + G+LG ND++ + VP + L + IV + CG H+
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGL--NDENDRYVPNLLKSLRSQKIVYICCGEDHT 254
Query: 299 VALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACG 358
ALT++G +F+FG G +G+LG+ +T + PR + + I +ACG
Sbjct: 255 AALTKEGGVFTFGAGGYGQLGHN---STSHEIN-------PRKVFELMGS--IVTQIACG 302
Query: 359 GRHTLAIV 366
+HT A V
Sbjct: 303 RQHTSAFV 310
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 91/236 (38%), Gaps = 52/236 (22%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTK 60
++ + + WG + GQLG+G + +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGI-----------------------------------ECQ 176
Query: 61 TENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRIL 120
+ P + +L +Q A GG H + G + WG N++GQ G E +L
Sbjct: 177 KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236
Query: 121 RRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWT-----WGQPWPPGDIKQISVPVR 175
+ + Q+ + + G H+ LT+EG V+T +GQ +I+ P +
Sbjct: 237 KS--LRSQK------IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN-PRK 287
Query: 176 VQGL--EQVKLIAVGAFHNLAL-QEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQG 228
V L V IA G H A G ++++G GQLGTG T R P V+G
Sbjct: 288 VFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3
Length = 4836
Score = 155 bits (391), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 187/393 (47%), Gaps = 51/393 (12%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK------- 58
+I WG GQLG + + +AL + ++ G + A+ DGK
Sbjct: 3955 TIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYG 4014
Query: 59 ---------TKTENIPSQVNALSNTKIVQAAI--GGWHCLAVDDQGRAYAWGGNEYGQCG 107
T++ + P+ + ++ + I + A+ GG HCLA+ +G Y+WG E G+ G
Sbjct: 4015 AGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4074
Query: 108 EEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWP 163
D R++ I V VAAGG HS +T G ++TWG+
Sbjct: 4075 HGNRSPCDRPRVIESLRGIE--------VVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4126
Query: 164 PGDIKQISVPVRVQGLEQVKLIAV----GAFHNLALQEDGALWAWGNNEYGQLGTGDTQP 219
D + P V+ L+ ++I + G L L +D +W+WG+ +YG+LG G +
Sbjct: 4127 HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4186
Query: 220 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 279
P+ + L+GL +V + G S ALT G VY WG+G++ RLG G +D + P++
Sbjct: 4187 CKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR--PRQ 4244
Query: 280 VNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
V L G+ ++ ++ G H V T DG ++++G D G+LG G T ++ P + A
Sbjct: 4245 VQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG----TTNAIQRPRLVAAL 4300
Query: 340 RNAGDGVDRRWIAKLVACGGRHTLAIVEWQTEE 372
+ G V+R VACG HTLA W T +
Sbjct: 4301 Q--GKKVNR------VACGSAHTLA---WSTSK 4322
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 160/313 (51%), Gaps = 27/313 (8%)
Query: 63 NIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRR 122
+PS LS +VQ A G AV +G+ Y+ G G+ G T I R+
Sbjct: 2982 KVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLG--MSSGTVPIPRQ 3039
Query: 123 DIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ--PWPPGDIKQISV--PVRVQG 178
+ K+ V +GG H+ LT +G V++WG+ G +++ P ++
Sbjct: 3040 ITALSSYVVKKVAVH---SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA 3096
Query: 179 LE--QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVD 236
L+ +++ IA G+ H+ AL G L+ WG EYG+LG GD + +P V+ L G ++
Sbjct: 3097 LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ 3156
Query: 237 IAAGG--WHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCG 294
+A G + ALTD+G V+ WG G+ G+LG G ++ + +PQ + L G+ + Q+ CG
Sbjct: 3157 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN--IPQNIERLNGQGVCQIECG 3214
Query: 295 GTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKL 354
S+ALT+ G ++++G+GD+ RLG+G V +P V +G+ + I
Sbjct: 3215 AQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVV-----------EGLRGKKIVH- 3262
Query: 355 VACGGRHTLAIVE 367
VA G H LA+ +
Sbjct: 3263 VAVGALHCLAVTD 3275
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 166/352 (47%), Gaps = 56/352 (15%)
Query: 40 VRSVVAGSRNSLAICDDGKTKTENI------PSQVNALSNTKIVQAAI--GGWHCLAVDD 91
V V + L + +G+ T+ P V L++ IV+ A G H LA+
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAA 513
Query: 92 QGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLI-----------VRQVA 140
G Y+WG CG D GR+ D V + PK+I V +A
Sbjct: 514 TGEVYSWG------CG-------DGGRLGHGDTVPLEE--PKVISAFSGKQAGKHVVHIA 558
Query: 141 AGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGLEQVKLIAV----GAFHN 192
G T+S +T EG ++TWG+ G + ++P+ V GL+ +K+I V G
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQT 618
Query: 193 LALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGE 252
LA+ E+G +W+WG+ +YG+LG G + P ++ L L ++ + G S ALT DG+
Sbjct: 619 LAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQ 678
Query: 253 VYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGR 312
VY WG+G++ RLG G + P+ + L G+ ++ V+ G TH +ALT D + S+G
Sbjct: 679 VYSWGKGDNQRLGHGTEEHVR--YPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 736
Query: 313 GDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLA 364
D + +VT +P +P G+D + I +ACG + A
Sbjct: 737 NDQCQHFDTLRVTKPEPTALP-----------GLDSKHIVG-IACGPAQSFA 776
Score = 125 bits (315), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 152/319 (47%), Gaps = 50/319 (15%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P Q L++ ++Q A L + GR Y N D+
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNS--------------------DM 482
Query: 125 VIPQRC---APKLIVRQVA-AGGTHSVVLTREGHVWTWG----------QPWPPGDIKQI 170
+ PQ A + IV+ A + G H + L G V++WG P + K I
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 542
Query: 171 SVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLS 230
S Q + V IA G+ ++ A+ +G L+ WG YG+LG G ++ + P+ V GL
Sbjct: 543 SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLK 602
Query: 231 GLTLVDIAAGG--WHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDI 288
GL ++D+A G + A+T++G+V+ WG G++G+LG G +D P+ + L D+
Sbjct: 603 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK--TPKLIEKLQDLDV 660
Query: 289 VQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDR 348
++V CG S+ALT+DG ++S+G+GD+ RLG+G + P + +G+
Sbjct: 661 IKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLL-----------EGLQG 709
Query: 349 RWIAKLVACGGRHTLAIVE 367
+ + VA G H LA+ E
Sbjct: 710 KKVID-VAAGSTHCLALTE 727
Score = 123 bits (308), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 156/338 (46%), Gaps = 67/338 (19%)
Query: 7 IIAWGSGEDGQLGIGNNE-----EREWVCVVKALEPYKVRSVV--AGSRNSLAICDDGKT 59
+ + G +G+LG+G + R+ + AL Y V+ V +G R++ A+ DGK
Sbjct: 3014 VYSCGEATNGRLGLGMSSGTVPIPRQ----ITALSSYVVKKVAVHSGGRHATALTVDGKV 3069
Query: 60 KT----------------ENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 103
+ + P + AL +I A G H A+ G Y WG EY
Sbjct: 3070 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3129
Query: 104 GQCGEEPERKDDTGRILRRDIVIPQRCAPKLI-------VRQVAAGG--THSVVLTREGH 154
G+ G D+T ++ PK++ V QVA G ++ LT EG
Sbjct: 3130 GRLGH----GDNTTQL-----------KPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174
Query: 155 VWTWGQPWPPGDIKQI--------SVPVRVQGL--EQVKLIAVGAFHNLALQEDGALWAW 204
V++WG GD ++ ++P ++ L + V I GA +LAL + G +W W
Sbjct: 3175 VFSWGD----GDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3230
Query: 205 GNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRL 264
G +Y +LG G +P V+GL G +V +A G H A+TD G+VY WG +HG+
Sbjct: 3231 GKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQ 3290
Query: 265 GFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALT 302
G G + K P V L G+ I +V+CG +HSVA T
Sbjct: 3291 GNGTTTVNRK--PTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 136/313 (43%), Gaps = 64/313 (20%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTK 60
++S + +WG EDG+LG GN CD
Sbjct: 4056 LSSEGEVYSWGEAEDGKLGHGNRSP----------------------------CDR---- 4083
Query: 61 TENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE---EPERKDDTG 117
P + +L ++V A GG H V G Y WG YG+ G E + K
Sbjct: 4084 ----PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 4139
Query: 118 RILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQI------- 170
L+ VI C +G ++ LT + VW+WG GD ++
Sbjct: 4140 EALQGHRVIDIAC---------GSGDAQTLCLTDDDTVWSWGD----GDYGKLGRGGSDG 4186
Query: 171 -SVPVRVQGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQ 227
VP+++ L + ++ V G+ ++AL + GA++ WG +Y +LG G +P VQ
Sbjct: 4187 CKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQ 4246
Query: 228 GLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGED 287
GL G ++ IA G H T+DGEVY WG + G+LG G + + P+ V L G+
Sbjct: 4247 GLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--PRLVAALQGKK 4304
Query: 288 IVQVSCGGTHSVA 300
+ +V+CG H++A
Sbjct: 4305 VNRVACGSAHTLA 4317
Score = 85.1 bits (209), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 122/274 (44%), Gaps = 36/274 (13%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYK----VRSVVAGSRNSLAICDD 56
+A+T + +WG G+ G+LG G+ E V+ A + V + GS S AI +
Sbjct: 511 LAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 570
Query: 57 GKTKT----------------ENIPSQVNALSNTKIVQAAIGG--WHCLAVDDQGRAYAW 98
G+ T E IP V L K++ A G LAV + G+ ++W
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630
Query: 99 GGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTW 158
G +YG+ G T +++ + L V +V G S+ LT++G V++W
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEK--------LQDLDVIKVRCGSQFSIALTKDGQVYSW 682
Query: 159 G----QPWPPGDIKQISVPVRVQGLEQVKLI--AVGAFHNLALQEDGALWAWGNNEYGQL 212
G Q G + + P ++GL+ K+I A G+ H LAL ED + +WG+N+ Q
Sbjct: 683 GKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 742
Query: 213 GTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTA 246
+ +P + GL +V IA G S A
Sbjct: 743 FDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFA 776
Score = 68.6 bits (166), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 75/177 (42%), Gaps = 56/177 (31%)
Query: 199 GALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGL-------------------------- 232
G ++ WG+N GQLG + P P + L+ L
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4013
Query: 233 -----------------TLVD-----------IAAGGWHSTALTDDGEVYGWGRGEHGRL 264
TL++ + +GG H AL+ +GEVY WG E G+L
Sbjct: 4014 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4073
Query: 265 GFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYG 321
G G+ + P+ + L G ++V V+ GG HS +T G ++++G+G +GRLG+
Sbjct: 4074 GHGNRSPCDR--PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 4128
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 32/218 (14%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRN--SLAICDDGK 58
+ S+ + WG GE G+LG G+N + +VK L ++V V GSR+ +LA+ D+G
Sbjct: 3115 LTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174
Query: 59 TKT----------------ENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNE 102
+ NIP + L+ + Q G LA+ G + WG +
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3234
Query: 103 YGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ-- 160
Y + G + +R+ V+ K++ VA G H + +T G V+ WG
Sbjct: 3235 YFRLGHGSDVH------VRKPQVVEGLRGKKIV--HVAVGALHCLAVTDSGQVYAWGDND 3286
Query: 161 --PWPPGDIKQISVPVRVQGLE--QVKLIAVGAFHNLA 194
G P VQGLE ++ +A G+ H++A
Sbjct: 3287 HGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 33.5 bits (75), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKTENIPS 66
+ WG ++GQLG G + +V AL+ KV V GS ++LA +P+
Sbjct: 4272 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPA 4331
Query: 67 QV 68
QV
Sbjct: 4332 QV 4333
>sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2
Length = 4834
Score = 154 bits (388), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 187/393 (47%), Gaps = 51/393 (12%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK------- 58
+I WG GQLG + + +AL + ++ G + A+ DGK
Sbjct: 3953 TIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYG 4012
Query: 59 ---------TKTENIPSQVNALSNTKIVQAAI--GGWHCLAVDDQGRAYAWGGNEYGQCG 107
T++ + P+ + ++ + I + A+ GG HCLA+ +G Y+WG E G+ G
Sbjct: 4013 AGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072
Query: 108 EEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWP 163
D R++ I V VAAGG HS +T G ++TWG+
Sbjct: 4073 HGNRSPCDRPRVIESLRGIE--------VVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4124
Query: 164 PGDIKQISVPVRVQGLEQVKLIAV----GAFHNLALQEDGALWAWGNNEYGQLGTGDTQP 219
D + P V+ L+ +++ + G L L +D +W+WG+ +YG+LG G +
Sbjct: 4125 HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184
Query: 220 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 279
P+ + L+GL +V + G S ALT G VY WG+G++ RLG G +D + P++
Sbjct: 4185 CKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR--PRQ 4242
Query: 280 VNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
V L G+ ++ ++ G H V T DG ++++G D G+LG G T ++ P + A
Sbjct: 4243 VQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG----TTNAIQRPRLVAAL 4298
Query: 340 RNAGDGVDRRWIAKLVACGGRHTLAIVEWQTEE 372
+ G V+R VACG HTLA W T +
Sbjct: 4299 Q--GKKVNR------VACGSAHTLA---WSTSK 4320
Score = 135 bits (340), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 165/317 (52%), Gaps = 35/317 (11%)
Query: 63 NIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRR 122
+PS LS +VQ A G AV +G+ YA CGE + G I
Sbjct: 2981 KVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA--------CGEATNGRLGLG-ISSG 3031
Query: 123 DIVIPQRCA--PKLIVRQVA--AGGTHSVVLTREGHVWTWGQ--PWPPGDIKQISV--PV 174
+ IP++ +V++VA +GG H+ LT +G V++WG+ G +++ P
Sbjct: 3032 TVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPR 3091
Query: 175 RVQGLE--QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGL 232
++ L+ +++ IA G+ H+ AL G L+ WG EYG+LG GD + +P V+ L G
Sbjct: 3092 LIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH 3151
Query: 233 TLVDIAAGG--WHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQ 290
++ +A G + ALTD+G V+ WG G+ G+LG G ++ + +PQ + L G+ + Q
Sbjct: 3152 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN--IPQNIERLNGQGVCQ 3209
Query: 291 VSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRW 350
+ CG S+ALT+ G ++++G+GD+ RLG+G V +P V +G+ +
Sbjct: 3210 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVV-----------EGLRGKK 3258
Query: 351 IAKLVACGGRHTLAIVE 367
I VA G H LA+ +
Sbjct: 3259 IVH-VAVGALHCLAVTD 3274
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 166/352 (47%), Gaps = 56/352 (15%)
Query: 40 VRSVVAGSRNSLAICDDGKTKTENI------PSQVNALSNTKIVQAAI--GGWHCLAVDD 91
V + + L + +G+ T+ P V L++ IV+ A G H LA+
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA 512
Query: 92 QGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLI-----------VRQVA 140
G Y+WG CG D GR+ D V + PK+I V +A
Sbjct: 513 TGEVYSWG------CG-------DGGRLGHGDTVPLEE--PKVISAFSGKQAGKHVVHIA 557
Query: 141 AGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGLEQVKLIAV----GAFHN 192
G T+S +T EG ++TWG+ G + ++P+ V GL+ +K+I V G
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQT 617
Query: 193 LALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGE 252
LA+ E+G +W+WG+ +YG+LG G + P ++ L L +V + G S ALT DG+
Sbjct: 618 LAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ 677
Query: 253 VYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGR 312
VY WG+G++ RLG G + P+ + L G+ ++ V+ G TH +ALT D + S+G
Sbjct: 678 VYSWGKGDNQRLGHGTEEHVR--YPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 735
Query: 313 GDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLA 364
D + +VT +P +P G+D + I +ACG + A
Sbjct: 736 NDQCQHFDTLRVTKPEPAALP-----------GLDTKHIVG-IACGPAQSFA 775
Score = 126 bits (316), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 150/319 (47%), Gaps = 50/319 (15%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P Q L+N + Q A L + GR Y N D
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS--------------------DT 481
Query: 125 VIPQRC---APKLIVRQVA-AGGTHSVVLTREGHVWTWG----------QPWPPGDIKQI 170
+ PQ A + IV+ A + G H + L G V++WG P + K I
Sbjct: 482 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 541
Query: 171 SVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLS 230
S Q + V IA G+ ++ A+ +G L+ WG YG+LG G ++ + P+ V GL
Sbjct: 542 SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLK 601
Query: 231 GLTLVDIAAGG--WHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDI 288
GL ++D+A G + A+T++G+V+ WG G++G+LG G +D P+ + L D+
Sbjct: 602 GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK--TPKLIEKLQDLDV 659
Query: 289 VQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDR 348
V+V CG S+ALT+DG ++S+G+GD+ RLG+G + P + +G+
Sbjct: 660 VKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLL-----------EGLQG 708
Query: 349 RWIAKLVACGGRHTLAIVE 367
+ + VA G H LA+ E
Sbjct: 709 KKVID-VAAGSTHCLALTE 726
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 156/338 (46%), Gaps = 67/338 (19%)
Query: 7 IIAWGSGEDGQLGIGNNE-----EREWVCVVKALEPYKVRSVV--AGSRNSLAICDDGKT 59
+ A G +G+LG+G + R+ + AL Y V+ V +G R++ A+ DGK
Sbjct: 3013 VYACGEATNGRLGLGISSGTVPIPRQ----ITALSSYVVKKVAVHSGGRHATALTVDGKV 3068
Query: 60 KT----------------ENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 103
+ + P + AL +I A G H A+ G Y WG EY
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3128
Query: 104 GQCGEEPERKDDTGRILRRDIVIPQRCAPKLI-------VRQVAAGG--THSVVLTREGH 154
G+ G D+T ++ PK++ V QVA G ++ LT EG
Sbjct: 3129 GRLGH----GDNTTQL-----------KPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173
Query: 155 VWTWGQPWPPGDIKQI--------SVPVRVQGL--EQVKLIAVGAFHNLALQEDGALWAW 204
V++WG GD ++ ++P ++ L + V I GA +LAL + G +W W
Sbjct: 3174 VFSWGD----GDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3229
Query: 205 GNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRL 264
G +Y +LG G +P V+GL G +V +A G H A+TD G+VY WG +HG+
Sbjct: 3230 GKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQ 3289
Query: 265 GFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALT 302
G G + K P V L G+ I +V+CG +HSVA T
Sbjct: 3290 GNGTTTVNRK--PTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 136/313 (43%), Gaps = 64/313 (20%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTK 60
++S + +WG EDG+LG GN CD
Sbjct: 4054 LSSEGEVYSWGEAEDGKLGHGNRSP----------------------------CDR---- 4081
Query: 61 TENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE---EPERKDDTG 117
P + +L ++V A GG H V G Y WG YG+ G E + K
Sbjct: 4082 ----PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 4137
Query: 118 RILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQI------- 170
L+ V+ C +G ++ LT + VW+WG GD ++
Sbjct: 4138 EALQGHRVVDIAC---------GSGDAQTLCLTDDDTVWSWGD----GDYGKLGRGGSDG 4184
Query: 171 -SVPVRVQGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQ 227
VP+++ L + ++ V G+ ++AL + GA++ WG +Y +LG G +P VQ
Sbjct: 4185 CKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQ 4244
Query: 228 GLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGED 287
GL G ++ IA G H T+DGEVY WG + G+LG G + + P+ V L G+
Sbjct: 4245 GLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--PRLVAALQGKK 4302
Query: 288 IVQVSCGGTHSVA 300
+ +V+CG H++A
Sbjct: 4303 VNRVACGSAHTLA 4315
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 122/274 (44%), Gaps = 36/274 (13%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYK----VRSVVAGSRNSLAICDD 56
+A+T + +WG G+ G+LG G+ E V+ A + V + GS S AI +
Sbjct: 510 LAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 569
Query: 57 GKTKT----------------ENIPSQVNALSNTKIVQAAIGG--WHCLAVDDQGRAYAW 98
G+ T E IP V L K++ A G LAV + G+ ++W
Sbjct: 570 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 629
Query: 99 GGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTW 158
G +YG+ G T +++ + L V +V G S+ LT++G V++W
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEK--------LQDLDVVKVRCGSQFSIALTKDGQVYSW 681
Query: 159 G----QPWPPGDIKQISVPVRVQGLEQVKLI--AVGAFHNLALQEDGALWAWGNNEYGQL 212
G Q G + + P ++GL+ K+I A G+ H LAL ED + +WG+N+ Q
Sbjct: 682 GKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQH 741
Query: 213 GTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTA 246
+ +P + GL +V IA G S A
Sbjct: 742 FDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFA 775
Score = 68.6 bits (166), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 75/177 (42%), Gaps = 56/177 (31%)
Query: 199 GALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGL-------------------------- 232
G ++ WG+N GQLG + P P + L+ L
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011
Query: 233 -----------------TLVD-----------IAAGGWHSTALTDDGEVYGWGRGEHGRL 264
TL++ + +GG H AL+ +GEVY WG E G+L
Sbjct: 4012 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4071
Query: 265 GFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYG 321
G G+ + P+ + L G ++V V+ GG HS +T G ++++G+G +GRLG+
Sbjct: 4072 GHGNRSPCDR--PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 4126
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 32/218 (14%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRN--SLAICDDGK 58
+ S+ + WG GE G+LG G+N + +VK L ++V V GSR+ +LA+ D+G
Sbjct: 3114 LTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173
Query: 59 TKT----------------ENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNE 102
+ NIP + L+ + Q G LA+ G + WG +
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3233
Query: 103 YGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ-- 160
Y + G + +R+ V+ K++ VA G H + +T G V+ WG
Sbjct: 3234 YFRLGHGSDVH------VRKPQVVEGLRGKKIV--HVAVGALHCLAVTDSGQVYAWGDND 3285
Query: 161 --PWPPGDIKQISVPVRVQGLE--QVKLIAVGAFHNLA 194
G P VQGLE ++ +A G+ H++A
Sbjct: 3286 HGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 33.5 bits (75), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKTENIPS 66
+ WG ++GQLG G + +V AL+ KV V GS ++LA +P+
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPA 4329
Query: 67 QV 68
QV
Sbjct: 4330 QV 4331
>sp|Q5GLZ8|HERC4_HUMAN Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4
PE=1 SV=1
Length = 1057
Score = 151 bits (382), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 115/360 (31%), Positives = 171/360 (47%), Gaps = 53/360 (14%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYK--------VRSVVAGSRNSLAICDDGK 58
++ WG+ GQLG+G +E LEP K VR V G R+++ + DDG
Sbjct: 1 MLCWGNASFGQLGLGGIDEE------IVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGT 54
Query: 59 T--------------KTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYG 104
K+ P QV AL IV + G H LA++D+G+ YAWG + G
Sbjct: 55 VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 105 QCG----EEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ 160
Q G EE R + R+I + + + QVA G HS+ L++ V+ WGQ
Sbjct: 115 QLGLVGSEECIR-------VPRNI----KSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 161 PWPP-----GDIKQISVPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLG 213
D K+ + P ++ L + +A G H+ L GA++ WG N++GQLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 214 TGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSS 273
D R P ++ L +V I G H+ ALT +G V+ +G G +G+L G N S
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQL--GHNSTSH 281
Query: 274 KMVPQKVNLLAGEDIVQVSCGGTHSVALT-RDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
++ P+KV L G + +++CG H+ A G I+SFG G +G+LG G P V
Sbjct: 282 EINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 91/236 (38%), Gaps = 52/236 (22%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTK 60
++ + + WG + GQLG+G + K
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTD-----------------------------------CK 176
Query: 61 TENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRIL 120
+ P + +L +Q A GG H + G + WG N++GQ G E +L
Sbjct: 177 KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236
Query: 121 RRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWT-----WGQPWPPGDIKQISVPVR 175
+ + Q+ + + G H+ LT+EG V+T +GQ +I+ P +
Sbjct: 237 KS--LRSQK------IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN-PRK 287
Query: 176 VQGL--EQVKLIAVGAFHNLAL-QEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQG 228
V L V IA G H A G ++++G GQLGTG T R P V+G
Sbjct: 288 VFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster
GN=HERC2 PE=1 SV=3
Length = 4912
Score = 148 bits (374), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 113/394 (28%), Positives = 176/394 (44%), Gaps = 48/394 (12%)
Query: 5 TSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK------ 58
++I WG GQLG + +AL + + G ++ A+ DGK
Sbjct: 4049 STIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4108
Query: 59 ----------TKTENIPSQVNALSNTKIVQAAI--GGWHCLAVDDQGRAYAWGGNEYGQC 106
+ + IP+ + +L + + + A+ GG HCLA+ +G YAWG E G+
Sbjct: 4109 GSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKL 4168
Query: 107 GEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PW 162
G D +++ + V +A G HS +T GHV TWG+
Sbjct: 4169 GHGNRMSYDRPKLVEH--------LNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRL 4220
Query: 163 PPGDIKQISVPVRVQGLEQVKLIAV----GAFHNLALQEDGALWAWGNNEYGQLGTGDTQ 218
GD + P V+ L + I + G L + +D +W+WG+ +YG+LG G +
Sbjct: 4221 GHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD 4280
Query: 219 PRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQ 278
P ++ L+GL +V + G S ALT G VY WG+G+ RLG G D + P+
Sbjct: 4281 GCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRR--PK 4338
Query: 279 KVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPA 338
KV L G+ I+ ++ G H VA + G ++++G D G+LG G +P V
Sbjct: 4339 KVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVA----- 4393
Query: 339 PRNAGDGVDRRWIAKLVACGGRHTLAIVEWQTEE 372
+ + I K V CG HTLA+ Q E
Sbjct: 4394 ------ALQGKHIVK-VTCGSAHTLALSTSQLSE 4420
Score = 139 bits (351), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 178/385 (46%), Gaps = 48/385 (12%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK------- 58
+++ WG + QLG + + + + + + GS++ + DGK
Sbjct: 2987 TVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEG 3046
Query: 59 ---------TKTENIPSQVNALSNTKIVQAAI--GGWHCLAVDDQGRAYAWGGNEYGQCG 107
T +P Q+ L + + A+ GG H LA+ G+ ++WG E G+ G
Sbjct: 3047 TNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLG 3106
Query: 108 EEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWP 163
D R+ + A K +R VA G +HS ++ +G ++TWG
Sbjct: 3107 HGNRTTLDKPRL------VEALRAKK--IRDVACGSSHSAAISSQGELYTWGLGEYGRLG 3158
Query: 164 PGDIKQISVPVRVQGLEQVKLIAVGA----FHNLALQEDGALWAWGNNEYGQLGTGDTQP 219
GD P V L +++ V LAL EDGA+++WG+ ++G+LG G ++
Sbjct: 3159 HGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEG 3218
Query: 220 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 279
P ++ LSG+ +V I G S ALT GEV+ WG+G++ RLG G + K PQ
Sbjct: 3219 SDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRK--PQP 3276
Query: 280 VNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
+ L G ++ V+ G H +A+T G ++++G DHG+ G G +P V
Sbjct: 3277 IGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALV------- 3329
Query: 340 RNAGDGVDRRWIAKLVACGGRHTLA 364
G+D ++ + VACG H++A
Sbjct: 3330 ----IGLDAVFVNR-VACGSSHSIA 3349
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 162/319 (50%), Gaps = 40/319 (12%)
Query: 63 NIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRR 122
+P+ +S + + A G V G+ YA G G+ G +
Sbjct: 3008 KVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLG----------VTH 3057
Query: 123 DIVIPQRCA--PKLIVRQVA--AGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPV 174
++ +P + + +V++VA +GG H++ LT +G V++WG+ G+ + P
Sbjct: 3058 NVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPR 3117
Query: 175 RVQGL--EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGL 232
V+ L ++++ +A G+ H+ A+ G L+ WG EYG+LG GD + +P V L+G
Sbjct: 3118 LVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGR 3177
Query: 233 TLVDIAAGG--WHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQ 290
+V +A G + ALT+DG V+ WG G+ G+LG G ++ S P ++ L+G +VQ
Sbjct: 3178 RVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSD--TPHEIERLSGIGVVQ 3235
Query: 291 VSCGGTHSVALTRDGHIFSFGRGDHGRLGYG--RKVTTGQPMEVPINIPAPRNAGDGVDR 348
+ CG S+ALTR G ++++G+GD+ RLG+G + V QP+ G R
Sbjct: 3236 IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPI------------GGLRGR 3283
Query: 349 RWIAKLVACGGRHTLAIVE 367
R I VA G H LA+ +
Sbjct: 3284 RVIH--VAVGALHCLAVTD 3300
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 151/328 (46%), Gaps = 33/328 (10%)
Query: 38 YKVRSVVAGSRNSLAICDDGK------TKTENIPSQVNALSNTKIVQAA--IGGWHCLAV 89
++++ V L + +GK K E P + +++ + A G H LA+
Sbjct: 572 FQIKQVACCETQMLILSQEGKLYTWRLAKPEAEPLPMEEVAHDVFISIAGHCEGRHFLAI 631
Query: 90 DDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIV-IPQRCAPKLIVRQVAAGGTHSVV 148
D AY+WG E + G D R + I + Q C V+ V G ++S
Sbjct: 632 DSNHNAYSWGTGEDHRLGH----GDTHARAVPTKIAALEQHC-----VQSVYCGCSYSAA 682
Query: 149 LTREGHVWTWGQ----PWPPGDIKQISVPVRVQGLEQVKLIAV----GAFHNLALQEDGA 200
+T G++ TWG+ G+ S+P V L ++ V G H+LAL +G
Sbjct: 683 ITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGL 742
Query: 201 LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGE 260
++AWG+ +YG+LG G+ QPI V+ L + + AG S AL+ +G++Y WG+
Sbjct: 743 VFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQ--RVFAGSQFSVALSSEGQLYTWGKAT 800
Query: 261 HGRLGFGDNDKSSK--MVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRL 318
LG ++S + VP+ V+ L + IV V+ H +AL+ G +F +GR D ++
Sbjct: 801 C--LGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI 858
Query: 319 GYGRKVTTGQPMEVPINIPAPRNAGDGV 346
V++ + PI + P G+
Sbjct: 859 CPA-SVSSEPLLRTPILVSLPTFPASGI 885
Score = 102 bits (254), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 108/206 (52%), Gaps = 14/206 (6%)
Query: 133 KLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEQVKLIAVGAF-- 190
+ ++QVA T ++L++EG ++TW P + P+ ++ + I++
Sbjct: 571 RFQIKQVACCETQMLILSQEGKLYTWRLAKPEAE------PLPMEEVAHDVFISIAGHCE 624
Query: 191 --HNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALT 248
H LA+ + ++WG E +LG GDT R+ P + L + + G +S A+T
Sbjct: 625 GRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAIT 684
Query: 249 DDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGG--THSVALTRDGH 306
G + WGRG + RLG G++D S +P V L+ +V V+ G HS+ALT +G
Sbjct: 685 CGGNLLTWGRGTYARLGHGNSDDRS--LPTLVVALSDHMVVDVALGSGDAHSLALTSEGL 742
Query: 307 IFSFGRGDHGRLGYGRKVTTGQPMEV 332
+F++G GD+G+LG G + QP+ V
Sbjct: 743 VFAWGDGDYGKLGNGNCNGSLQPILV 768
Score = 88.2 bits (217), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 113/236 (47%), Gaps = 36/236 (15%)
Query: 3 STTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKT- 61
S + +WG+GED +LG G+ R + ALE + V+SV G S AI G T
Sbjct: 633 SNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTW 692
Query: 62 ---------------ENIPSQVNALSNTKIVQAAIGG--WHCLAVDDQGRAYAWGGNEYG 104
++P+ V ALS+ +V A+G H LA+ +G +AWG +YG
Sbjct: 693 GRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYG 752
Query: 105 QCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPP 164
+ G + G + + I++ P+ V++V AG SV L+ EG ++TWG+
Sbjct: 753 KLGN----GNCNGSL--QPILV--ESLPR--VQRVFAGSQFSVALSSEGQLYTWGKATCL 802
Query: 165 G------DIKQISVPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQL 212
G ++ SVP V L+ ++ +AV H LAL G ++ WG N+ Q+
Sbjct: 803 GHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI 858
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 101/267 (37%), Gaps = 78/267 (29%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRN--SLAICDDGK 58
++S + WG GE G+LG G+N + +V AL +V V GSR+ +LA+ +DG
Sbjct: 3140 ISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGA 3199
Query: 59 ----------------TKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNE 102
++ + P ++ LS +VQ G LA+ G + WG +
Sbjct: 3200 VFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGD 3259
Query: 103 Y---GQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG 159
Y G G++ RK LR VI VA G H + +T G V+ W
Sbjct: 3260 YYRLGHGGDQHVRKPQPIGGLRGRRVI-----------HVAVGALHCLAVTDAGQVYAW- 3307
Query: 160 QPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQP 219
G+N++GQ G+G+T
Sbjct: 3308 ---------------------------------------------GDNDHGQQGSGNTFV 3322
Query: 220 RSQPIPVQGLSGLTLVDIAAGGWHSTA 246
+P V GL + + +A G HS A
Sbjct: 3323 NKKPALVIGLDAVFVNRVACGSSHSIA 3349
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 76/172 (44%), Gaps = 26/172 (15%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTK 60
+ S + AWG G+ G+LG GN +V++L +V+ V AGS+ S+A+ +G+
Sbjct: 737 LTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRVFAGSQFSVALSSEGQLY 794
Query: 61 T------------------ENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNE 102
T ++P V++L + +IV A+ HCLA+ G + WG N+
Sbjct: 795 TWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRND 854
Query: 103 YGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGH 154
Q + +LR I++ P +A S+V T+ H
Sbjct: 855 SQQICPASVSSEP---LLRTPILV---SLPTFPASGIACTSAQSLVWTQSSH 900
Score = 33.9 bits (76), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 39/108 (36%), Gaps = 36/108 (33%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTK 60
+ + ++ WG G+ +LG G+ + V AL+ K+ S+ GS
Sbjct: 4309 LTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGS------------- 4355
Query: 61 TENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 108
HC+A D G Y WG N+ GQ G+
Sbjct: 4356 -----------------------LHCVACSDSGEVYTWGDNDEGQLGD 4380
>sp|Q15034|HERC3_HUMAN Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3
PE=1 SV=1
Length = 1050
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/320 (32%), Positives = 154/320 (48%), Gaps = 52/320 (16%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPE--RKDDTGRILRR 122
P +S+ + + A GG H + + + G Y G N GQ G E E + + G + +
Sbjct: 25 PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALADQ 84
Query: 123 DIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG-----QPWPPGDIKQISVPVRVQ 177
I+ VA G +HS+ L+ G +++WG Q ++VP +Q
Sbjct: 85 HII------------HVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ 132
Query: 178 GLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQP-RSQPIPVQGLSGLTL 234
L Q ++ V G +H LAL DG + WG N +GQLG G P ++ P V+ L G+ L
Sbjct: 133 KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPL 192
Query: 235 VDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGD-NDKSSKMVPQKVNLLAGEDIVQVSC 293
+AAGG HS AL+ G V+GWG G+LG D D+ S P V LL + +V +SC
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES---PCHVKLLRTQKVVYISC 249
Query: 294 GGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAK 353
G H+ LT+ G +F+FG G G+LG+ + D V+ R + +
Sbjct: 250 GEEHTAVLTKSGGVFTFGAGSCGQLGHD-------------------SMNDEVNPRRVLE 290
Query: 354 L-------VACGGRHTLAIV 366
L +ACG +HTLA V
Sbjct: 291 LMGSEVTQIACGRQHTLAFV 310
Score = 139 bits (350), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 163/355 (45%), Gaps = 43/355 (12%)
Query: 7 IIAWGSGEDGQLGIGNNEE----REWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKTE 62
++ WG GQ GI N + VC + V+ V G +S+ + +DG+ T
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVC--GFISDRSVKEVACGGNHSVFLLEDGEVYTC 58
Query: 63 --------------NIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 108
N P Q+ AL++ I+ A G H LA+ D+G+ ++WG GQ
Sbjct: 59 GLNTKGQLGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ--- 115
Query: 109 EPERKDDTGRILRRDIVIPQRCAPKL---IVRQVAAGGTHSVVLTREGHVWTWG-----Q 160
G + D V R KL + QV+ G H + L +G +TWG Q
Sbjct: 116 -------LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168
Query: 161 PWPPGDIKQISVPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQ 218
+ + P RV+ LE + L +A G H+ AL GA++ WG N GQLG D +
Sbjct: 169 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK 228
Query: 219 PRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQ 278
R P V+ L +V I+ G H+ LT G V+ +G G G+L G + + ++ P+
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL--GHDSMNDEVNPR 286
Query: 279 KVNLLAGEDIVQVSCGGTHSVALT-RDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
+V L G ++ Q++CG H++A G I++FG G G+LG G P V
Sbjct: 287 RVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 120/237 (50%), Gaps = 18/237 (7%)
Query: 136 VRQVAAGGTHSVVLTREGHVWTWGQPWP--PGDIKQISVPVRVQGL--EQVKLIAVGAFH 191
V++VA GG HSV L +G V+T G G ++ + P ++ L + + +A G H
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALADQHIIHVACGESH 95
Query: 192 NLALQEDGALWAWGNNEYGQLGTGDTQPR-SQPIPVQGLSGLTLVDIAAGGWHSTALTDD 250
+LAL + G L++WG GQLG T+ + P +Q L+ T++ ++ G WH AL D
Sbjct: 96 SLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD 155
Query: 251 GEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSF 310
G+ + WG+ HG+LG G + S+ PQ+V L G + QV+ GG HS AL+ G +F +
Sbjct: 156 GQFFTWGKNSHGQLGLG-KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 311 GRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
G + G+LG + P V + R ++CG HT + +
Sbjct: 215 GMNNAGQLGLSDEKDRESPCHVKL------------LRTQKVVYISCGEEHTAVLTK 259
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 112/251 (44%), Gaps = 41/251 (16%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVC-VVKALEPYKVRSVVAGSRNSLAICDDGKTKT---- 61
+ +WG+G DGQLG+ E+ V +++ L + V G+ + LA+ DG+ T
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKN 164
Query: 62 --------ENIPSQ-----VNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 108
+ PSQ V +L + Q A GG H A+ G + WG N GQ G
Sbjct: 165 SHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 109 EPERKDDTG---RILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPG 165
E+ ++ ++LR V+ C G H+ VLT+ G V+T+G G
Sbjct: 225 SDEKDRESPCHVKLLRTQKVVYISC-----------GEEHTAVLTKSGGVFTFGAG-SCG 272
Query: 166 DIKQISV-----PVRVQGL--EQVKLIAVGAFHNLAL-QEDGALWAWGNNEYGQLGTGDT 217
+ S+ P RV L +V IA G H LA G ++A+G GQLGTG T
Sbjct: 273 QLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 218 QPRSQPIPVQG 228
P PV+G
Sbjct: 333 CNVKCPSPVKG 343
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 53/124 (42%), Gaps = 17/124 (13%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTK 60
++ + ++ WG GQLG+ + ++RE C VK L KV + G ++ + G
Sbjct: 205 LSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVF 264
Query: 61 T----------------ENIPSQVNALSNTKIVQAAIGGWHCLA-VDDQGRAYAWGGNEY 103
T E P +V L +++ Q A G H LA V G YA+G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR 324
Query: 104 GQCG 107
GQ G
Sbjct: 325 GQLG 328
>sp|Q8IVU3|HERC6_HUMAN Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6
PE=2 SV=2
Length = 1022
Score = 145 bits (365), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 145/303 (47%), Gaps = 34/303 (11%)
Query: 75 KIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKL 134
+++QAA G H L + R + G N GQ G + R ++ P + L
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQ--------RGELPEPIQALETL 75
Query: 135 IVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISV-PVRVQGLEQVKLIAV-- 187
IV V+ G HS+ + +G V+ WG G+ K+IS P ++ L +K+I V
Sbjct: 76 IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSC 135
Query: 188 GAFHNLALQEDGALWAWGNNEYGQLGTGDTQP-RSQPIPVQGLSGLTLVDIAAGGWHSTA 246
G +H+LAL +D +++WG N +GQLG G P ++ P V+ L G+ L +AAGG HS A
Sbjct: 136 GHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFA 195
Query: 247 LTDDGEVYGWGRGEHGRLGF-GDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDG 305
L+ G +GWG G+L G N P V L +V +SCG H+ LT+DG
Sbjct: 196 LSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDG 255
Query: 306 HIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRW--IAKLVACGGRHTL 363
+F+FG G+LGY P P G + R + + CG HTL
Sbjct: 256 KVFTFGDNRSGQLGYS---------------PTPEKRGPQLVERIDGLVSQIDCGSYHTL 300
Query: 364 AIV 366
A V
Sbjct: 301 AYV 303
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 138/329 (41%), Gaps = 70/329 (21%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKT------- 59
+++ G GQLG + E ++ALE V V G +SLA+C G+
Sbjct: 44 VLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGS 103
Query: 60 ----------KTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 109
+ P ++ L++ KI+Q + G +H LA+ + ++WG N +GQ G
Sbjct: 104 EGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG 163
Query: 110 PERKDDTGRILRRDIVIPQRCAPKLI-------VRQVAAGGTHSVVLTREGHVWTWGQPW 162
E P + +P+ + + QVAAGG HS L+ G + WG
Sbjct: 164 KE--------------FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGS-- 207
Query: 163 PPGDIKQISVPVRVQGLEQVKLIAVGAFHNL-------------ALQEDGALWAWGNNEY 209
Q+++ R ++ K ++VGA NL L +DG ++ +G+N
Sbjct: 208 --NSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRS 265
Query: 210 GQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDN 269
GQLG T + P V+ + GL + I G +H+ A Y G+ G G +
Sbjct: 266 GQLGYSPTPEKRGPQLVERIDGL-VSQIDCGSYHTLA-------YVHTTGQVVSFGHGPS 317
Query: 270 DKSSKMVPQKVN-------LLAGEDIVQV 291
D S P+ + L++ ED V V
Sbjct: 318 DTSKPTHPEALTENFDISCLISAEDFVDV 346
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 77/191 (40%), Gaps = 66/191 (34%)
Query: 228 GLSGLTLVDIAAGGWHSTALTDD------------------------------------- 250
G G L+ A+G HS L +
Sbjct: 19 GSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVD 78
Query: 251 ---------------GEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGG 295
G V+ WG G G+LG G+ + S P+K+ L I+QVSCG
Sbjct: 79 LVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKIMTLNDIKIIQVSCGH 137
Query: 296 THSVALTRDGHIFSFGRGDHGRLGYGRKV-TTGQPMEVPINIPAPRNAGDGVDRRWIAKL 354
HS+AL++D +FS+G+ HG+LG G++ + P V + +G+ +A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRV--------RSLEGIP---LAQ- 185
Query: 355 VACGGRHTLAI 365
VA GG H+ A+
Sbjct: 186 VAAGGAHSFAL 196
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 92/235 (39%), Gaps = 64/235 (27%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTK 60
++ + + +WG GQLG+G + P +VRS+
Sbjct: 143 LSKDSQVFSWGKNSHGQLGLGKEFPSQA-------SPQRVRSL----------------- 178
Query: 61 TENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGR-- 118
E IP + Q A GG H A+ G ++ WG N GQ +GR
Sbjct: 179 -EGIP----------LAQVAAGGAHSFALSLCGTSFGWGSNSAGQLAL-------SGRNV 220
Query: 119 ILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG---------QPWPPGDIKQ 169
++ + + L V ++ G H+ VLT++G V+T+G P P Q
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280
Query: 170 ISVPVRVQGLEQVKLIAVGAFHNLA-LQEDGALWAWGNNEYGQLGTGDTQPRSQP 223
+ R+ GL V I G++H LA + G + ++G+ G DT + P
Sbjct: 281 LV--ERIDGL--VSQIDCGSYHTLAYVHTTGQVVSFGH------GPSDTSKPTHP 325
>sp|F2Z461|HERC6_MOUSE E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1
Length = 1003
Score = 144 bits (364), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 153/311 (49%), Gaps = 44/311 (14%)
Query: 72 SNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCA 131
S +++QAA G H L + R Y+ G N +GQ G+ R+D + R + P +
Sbjct: 20 SGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQ---RRDQSTE--RPE---PIQAL 71
Query: 132 PKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQIS-VPVRVQGLEQVKLIA 186
L V V+ G HSV + +G V+ WG G+ K+IS +P +++ L +K+I
Sbjct: 72 NDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQ 131
Query: 187 V--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIP--VQGLSGLTLVDIAAGGW 242
V G +H+LAL EDG +++WG N GQLG G RSQ IP V+ L G+ L +AAGG
Sbjct: 132 VSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNS-RSQAIPQKVKSLEGIPLAQVAAGGT 190
Query: 243 HSTALTDDGEVYGWGRGEHGRLGF-GDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVAL 301
HS AL+ G +GWG G+L G+ K P + L ++ +SCG H+ L
Sbjct: 191 HSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVL 250
Query: 302 TRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAG------DGVDRRWIAKLV 355
T +G +F+FG G+L P+PR+ +G+ R +
Sbjct: 251 TEEGQVFTFGGNSSGQLQ-----------------PSPRSGQRGPQLIEGIGGR--VSQI 291
Query: 356 ACGGRHTLAIV 366
C HT+A V
Sbjct: 292 ECASYHTIAYV 302
Score = 121 bits (304), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 125/239 (52%), Gaps = 21/239 (8%)
Query: 138 QVAAGGTHSVVLTREGHVWT-----WGQPWPPGDIKQISVPVRVQGLE--QVKLIAVGAF 190
Q A+G HS++L V++ WGQ D + P +Q L V L++ G
Sbjct: 26 QAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRD-QSTERPEPIQALNDLHVDLVSCGKE 84
Query: 191 HNLALQEDGALWAWGNNEYGQLGTGDTQPRS-QPIPVQGLSGLTLVDIAAGGWHSTALTD 249
H++A+ G ++AWG GQLG G+ + S P ++ L+G+ ++ ++ G +HS AL++
Sbjct: 85 HSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSE 144
Query: 250 DGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFS 309
DG V+ WGR G+LG G N +S + +PQKV L G + QV+ GGTHS AL+ G F
Sbjct: 145 DGHVFSWGRNSEGQLGLGKNSRS-QAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFG 203
Query: 310 FGRGDHGRLGY-GRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
+G G+L G KV + + P +I A +N ++CG HT + E
Sbjct: 204 WGSNRSGQLALSGNKVK--EQIYKPHSIGALKNLS--------VIYISCGYEHTAVLTE 252
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 112/204 (54%), Gaps = 13/204 (6%)
Query: 162 WPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS 221
W G K + G+E ++ A G H+L L + +++ G+N +GQLG Q
Sbjct: 5 WAAGSRKPRRLKAGTSGIELLQ-AASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTE 63
Query: 222 QPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVN 281
+P P+Q L+ L + ++ G HS A+ G+V+ WG G G+LG G+ + S M P K+
Sbjct: 64 RPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFM-PTKIK 122
Query: 282 LLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRN 341
LAG I+QVSCG HS+AL+ DGH+FS+GR G+LG G+ + IP
Sbjct: 123 ALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQA-------IPQKVK 175
Query: 342 AGDGVDRRWIAKLVACGGRHTLAI 365
+ +G+ +A+ VA GG H+ A+
Sbjct: 176 SLEGIP---LAQ-VAAGGTHSFAL 195
Score = 91.7 bits (226), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 143/324 (44%), Gaps = 48/324 (14%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKT- 59
+ S + + G GQLG ++ E ++AL V V G +S+A+C GK
Sbjct: 37 LFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVF 96
Query: 60 ----------------KTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 103
+ +P+++ AL+ KI+Q + G +H LA+ + G ++WG N
Sbjct: 97 AWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSE 156
Query: 104 GQCGEEPERKDDTGRILRRDIVIPQRCAPK--LIVRQVAAGGTHSVVLTREGHVWTW--- 158
GQ G G+ R IPQ+ + + QVAAGGTHS L+ G + W
Sbjct: 157 GQLG--------LGKNSRSQ-AIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSN 207
Query: 159 --GQPWPPGD--IKQISVPVRVQGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQL 212
GQ G+ +QI P + L+ + +I + G H L E+G ++ +G N GQL
Sbjct: 208 RSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQL 267
Query: 213 GTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTA-LTDDGEVYGWGRGEHGRLGFGDNDK 271
+ P ++G+ G + I +H+ A + G+V GRG ++
Sbjct: 268 QPSPRSGQRGPQLIEGIGG-RVSQIECASYHTIAYVYTTGQVVSLGRGPS-----HTSNP 321
Query: 272 SSKMVPQK----VNLLAGEDIVQV 291
+ + P + LLA ED+V +
Sbjct: 322 THQEAPAENSDITCLLAAEDLVDI 345
>sp|Q9N1T2|RPGR_CANFA X-linked retinitis pigmentosa GTPase regulator OS=Canis familiaris
GN=RPGR PE=2 SV=1
Length = 1003
Score = 129 bits (323), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 154/316 (48%), Gaps = 26/316 (8%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDT 116
G T + P+ V AL K+ AA G H L + G+ YA GGN GQ G + T
Sbjct: 70 GSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERST 129
Query: 117 GRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWP----PGDIKQISV 172
++ QR ++Q++AG S LT +G ++ WG ++ + V
Sbjct: 130 FHLIS--FFTSQR-----KIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCV 182
Query: 173 PVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQ--PRSQPIPVQGLS 230
P +V + + I+ G +H+ + +G L+ +G E G+LG + P PV G+
Sbjct: 183 PQQVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIP 242
Query: 231 GLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQ 290
G +V +A GG H+ LT+ VY +G G+ G+LG G + VP+ + + + I
Sbjct: 243 G-KVVQVACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETS-VPKAIEHIKDQKISF 299
Query: 291 VSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRW 350
++CG H+ +T G +++FG G HG+LG G + +T Q + P + + R+
Sbjct: 300 IACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFI--------PTLCSNFL--RF 349
Query: 351 IAKLVACGGRHTLAIV 366
I +LV+CGG HTL
Sbjct: 350 IVQLVSCGGCHTLVFA 365
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 119/237 (50%), Gaps = 24/237 (10%)
Query: 139 VAAGGTHSVVLTREGHVW-----TWGQPWPPGDIKQISVPVRVQGL--EQVKLIAVGAFH 191
++ G H+ V+T ++ WGQ G +S P V+ L E+VK A G H
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQ-LGLGSKSTVSKPTCVKALKPEKVKFAACGRNH 98
Query: 192 NLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGL-SGLTLVDIAAGGWHSTALTDD 250
L E G ++A G N GQLG GDT+ RS + S + ++AG S ALT+D
Sbjct: 99 TLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTED 158
Query: 251 GEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSF 310
GE++ WG G++G + ++ VPQ+V + G+ I +SCG HS +T +G +++F
Sbjct: 159 GELFMWGDNSEGQIGL--ENVTNVCVPQQVTV--GKPISWISCGYYHSAFVTTEGQLYTF 214
Query: 311 GRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
G + G+LG ++ M P+ G+ + + VACGG HT+ + E
Sbjct: 215 GEPECGKLGLPNQLLVNHRMPQPV---------PGIPGKVVQ--VACGGGHTVVLTE 260
Score = 101 bits (252), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 151/328 (46%), Gaps = 38/328 (11%)
Query: 52 AICDDGKTK-TENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEP 110
A+ GKT+ ENIPS+ N + G H V + Y +G N +GQ G
Sbjct: 13 AVFTFGKTQFAENIPSKF-WFRNDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWGQLG--- 68
Query: 111 ERKDDTGRILRRDIVIPQRCAPKL---IVRQVAAGGTHSVVLTREGHVWTWG----QPWP 163
+ + V C L V+ A G H++V T G V+ G
Sbjct: 69 --------LGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLG 120
Query: 164 PGDIKQISVPVRVQGL---EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPR 220
GD ++ S + ++K ++ G+ + AL EDG L+ WG+N GQ+G +
Sbjct: 121 LGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENV--T 178
Query: 221 SQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV 280
+ +P Q G + I+ G +HS +T +G++Y +G E G+LG + + +PQ V
Sbjct: 179 NVCVPQQVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPV 238
Query: 281 NLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPR 340
+ G+ +VQV+CGG H+V LT +++FG G G+LG G + ++P
Sbjct: 239 PGIPGK-VVQVACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFL-------FETSVP--- 286
Query: 341 NAGDGVDRRWIAKLVACGGRHTLAIVEW 368
A + + + I+ +ACG HT I +
Sbjct: 287 KAIEHIKDQKIS-FIACGENHTALITDM 313
>sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1
PE=1 SV=2
Length = 4861
Score = 125 bits (313), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 161/337 (47%), Gaps = 56/337 (16%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKTENIP 65
+++A G G G+LG GN+++ + V+ AL+ + V
Sbjct: 4047 TVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV------------------------- 4081
Query: 66 SQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE---EPERKDDTGRILRR 122
T++V + H +A+ + G ++WG +YG+ G + +R+ L+
Sbjct: 4082 --------TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG 4133
Query: 123 DIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQG 178
+ V+ Q++ G HS V+T +G ++T+G G+ +P RV
Sbjct: 4134 EEVV-----------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA 4182
Query: 179 LE--QVKLIAVGAFHNLALQEDGAL-WAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLV 235
LE Q+ +A G H LA+ DG++ WA+G+ +YG+LG G++ +S P + L G+ +
Sbjct: 4183 LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIK 4242
Query: 236 DIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGG 295
+A G S ALT DG VY +G+ +G + + PQ++ +LAG I V+ G
Sbjct: 4243 KVACGTQFSVALTKDGHVYTFGQDR--LIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGA 4300
Query: 296 THSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
H++AL +G ++++G G+LG G +P V
Sbjct: 4301 EHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLV 4337
Score = 125 bits (313), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 144/282 (51%), Gaps = 35/282 (12%)
Query: 96 YAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHV 155
Y WG +GQ E R++++P +QV G + V+ G V
Sbjct: 4000 YLWGAGRHGQLAEA-----------GRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTV 4048
Query: 156 WTWGQ-------PWPPGDIKQISVPVRVQGLEQVKLIAVGAF--HNLALQEDGALWAWGN 206
G+ D+ ++V +QG +L+ H++AL E G +++WG+
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108
Query: 207 NEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGF 266
+YG+LG G++ + +P ++ L G +V ++ G HS +T DG+++ +G G++GRLG
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4168
Query: 267 GDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGH-IFSFGRGDHGRLGYGRKVT 325
G+ S+K +P++V L G I QV+CG H++A++ DG +++FG GD+G+LG G
Sbjct: 4169 GNT--SNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4226
Query: 326 TGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
P ++ + G G+ K VACG + ++A+ +
Sbjct: 4227 KSSPQKIDV------LCGIGI------KKVACGTQFSVALTK 4256
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 180/394 (45%), Gaps = 59/394 (14%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEP------YKVRSVVAGSRNSLAIC 54
++ T + WGS QL G E K L+P +++ AG + I
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQE--------KILQPKLAPSFSDAQTIEAGQYCTFVIS 419
Query: 55 DDGKTKT-------------ENIPSQVNALS-----NTKIVQAAIGG-WHCLAVDDQGRA 95
DG + N S + L+ + K V ++ G H LA +G
Sbjct: 420 TDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEV 479
Query: 96 YAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHV 155
++WG +YG+ G ++++ + +V V+AG HS +T +G +
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPL-------QGKVVVCVSAGYRHSAAVTEDGEL 532
Query: 156 WTWGQ----PWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDG-ALWAWGNNEYG 210
+TWG+ GD ++P V+ + V ++ G+ H +AL +DG +W++G + G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 211 QLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDND 270
+LG GDT +P ++ L G+ + + AG S ALT G+VY WG G LG G ++
Sbjct: 593 KLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSE 650
Query: 271 KSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPM 330
++ + P+ + LA IV VS G +H +AL+ D ++++G G+ G G +TG
Sbjct: 651 -ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN--STG--- 704
Query: 331 EVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLA 364
PI P + DG+ + I + G H+LA
Sbjct: 705 --PITKPKKVSGLDGIAIQQI----SAGTSHSLA 732
Score = 122 bits (307), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 152/298 (51%), Gaps = 31/298 (10%)
Query: 78 QAAIGGWHC-LAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIV 136
Q I G +C + G A G YG+ G+ DD + + ++
Sbjct: 4030 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDL-----HVLTVISALQGFVVT 4082
Query: 137 RQVAAGGT--HSVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGL--EQVKLIAVG 188
+ V + G+ HS+ LT G V++WG G+ + P +++ L E+V ++ G
Sbjct: 4083 QLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCG 4142
Query: 189 AFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALT 248
H+ + DG L+ +GN +YG+LG G+T + P V L G + +A G H+ A++
Sbjct: 4143 FKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4202
Query: 249 DDGE-VYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHI 307
DG V+ +G G++G+LG G++ ++K PQK+++L G I +V+CG SVALT+DGH+
Sbjct: 4203 ADGSMVWAFGDGDYGKLGLGNS--TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHV 4260
Query: 308 FSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
++FG+ L GR +P ++P+ GV I + VA G HTLA+
Sbjct: 4261 YTFGQDRLIGLPEGRARNHNRPQQIPVLA--------GV----IIEDVAVGAEHTLAL 4306
Score = 112 bits (280), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 139/273 (50%), Gaps = 33/273 (12%)
Query: 1 MASTTS--IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK 58
MA T S + +WG G+ G+LG GN++ + ++AL+ +V + G ++S + DGK
Sbjct: 4095 MALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGK 4154
Query: 59 ----------------TKTENIPSQVNALSNTKIVQAAIGGWHCLAVD-DQGRAYAWGGN 101
T + +P +V AL +I Q A G H LAV D +A+G
Sbjct: 4155 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDG 4214
Query: 102 EYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP 161
+YG+ G + T + + I + C + +++VA G SV LT++GHV+T+GQ
Sbjct: 4215 DYGKLG----LGNSTAKSSPQKIDV--LCG--IGIKKVACGTQFSVALTKDGHVYTFGQD 4266
Query: 162 ----WPPGDIKQISVPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTG 215
P G + + P ++ L V + +AVGA H LAL +G ++AWG+N GQLG G
Sbjct: 4267 RLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4326
Query: 216 DTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALT 248
T +P V GL G + I+AG HS A T
Sbjct: 4327 HTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359
Score = 111 bits (278), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 144/287 (50%), Gaps = 39/287 (13%)
Query: 1 MASTTS--IIAWGSGEDGQLGIGNNEEREWVCVVK-ALEPYKVRSVVAGSRNSLAICDDG 57
+A TT + +WG G+ G+LG GN+ +++ +++ L+ V V AG R+S A+ +DG
Sbjct: 471 LAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDG 530
Query: 58 KTKT----------------ENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRA-YAWGG 100
+ T NIP+ V +SN + + + G H +A+ GR +++GG
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 101 NEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ 160
+ G+ G DT R+ + ++ + +R+V AG S+ LT G V+ WG
Sbjct: 589 GDNGKLGH-----GDTNRVYKPKVI---EALQGMFIRKVCAGSQSSLALTSTGQVYAWGC 640
Query: 161 PWPPGDIKQISVPVRVQGLEQVKL-----IAVGAFHNLALQEDGALWAWGNNEYGQLGTG 215
G + +R + +E++ +++G H LAL D ++AWGNN GQ G G
Sbjct: 641 GACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 216 D-TQPRSQPIPVQGLSGLTLVDIAAGGWHS---TALTDDGEVYGWGR 258
+ T P ++P V GL G+ + I+AG HS TAL D +V W R
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 747
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 157/339 (46%), Gaps = 46/339 (13%)
Query: 6 SIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNS----LAICDDGK--- 58
S+ A G G G+LG+G++ + + + EP++ V+ S+ S LA +G+
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFS 481
Query: 59 -------------TKTENIPSQVNALSNTKIVQAAIGGW-HCLAVDDQGRAYAWGGNEYG 104
+ T+ P + K+V G+ H AV + G Y WG ++G
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 105 QCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGH-VWTWGQ--- 160
+ G D R IP V +V+ G +H++ L+++G VW++G
Sbjct: 542 RLGH----GDSNSR------NIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDN 591
Query: 161 -PWPPGDIKQISVPVRVQGLE--QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDT 217
GD ++ P ++ L+ ++ + G+ +LAL G ++AWG LG G +
Sbjct: 592 GKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSS 649
Query: 218 QPRS-QPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMV 276
+ + +P ++ L+ +VD++ G H AL+ D EVY WG G+ G G N
Sbjct: 650 EATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITK 708
Query: 277 PQKVNLLAGEDIVQVSCGGTHSV---ALTRDGHIFSFGR 312
P+KV+ L G I Q+S G +HS+ AL RD + ++ R
Sbjct: 709 PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 747
>sp|Q9UII4|HERC5_HUMAN E3 ISG15--protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=2
Length = 1024
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 121/232 (52%), Gaps = 20/232 (8%)
Query: 136 VRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLAL 195
+ V G H ++L+ +G + + +K + +Q +++ I G +H+LAL
Sbjct: 99 IHSVDQGAEHMLILSSDGKPFEYDN----YSMKHLRFESILQE-KKIIQITCGDYHSLAL 153
Query: 196 QEDGALWAWGNNEYGQLGTGDTQPRSQ-PIPVQGLSGLTLVDIAAGGWHSTALTDDGEVY 254
+ G L+AWG N +GQLG G P + P V+ L+G+ L I+AG HS AL+ G +Y
Sbjct: 154 SKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIY 213
Query: 255 GWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGD 314
WG+ E G+LG G + SK P + L + + V+CGG+HS LT+DG +F+FG G
Sbjct: 214 SWGKNECGQLGLGHTE--SKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGK 271
Query: 315 HGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIV 366
HG+LG+ +P V + V R +ACG HTLA V
Sbjct: 272 HGQLGHNSTQNELRPCLV----------AELVGYR--VTQIACGRWHTLAYV 311
Score = 123 bits (308), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 140/287 (48%), Gaps = 41/287 (14%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P + N KI G H L + G+ + E + + + LR +
Sbjct: 88 PKCIKLGKNMKIHSVDQGAEHMLILSSDGKPF--------------EYDNYSMKHLRFES 133
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ----------PWPPGDIKQISVPV 174
++ ++ K+I Q+ G HS+ L++ G ++ WGQ +P QI
Sbjct: 134 ILQEK---KII--QITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQI---- 184
Query: 175 RVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGL 232
V+ L V L I+ G H++AL G +++WG NE GQLG G T+ + P ++GL
Sbjct: 185 -VEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQ 243
Query: 233 TLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVS 292
+ +A GG HS LT DG ++ +G G+HG+L G N +++ P V L G + Q++
Sbjct: 244 KVEFVACGGSHSALLTQDGLLFTFGAGKHGQL--GHNSTQNELRPCLVAELVGYRVTQIA 301
Query: 293 CGGTHSVALTRD-GHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPA 338
CG H++A D G +FSFG G G+LG G T Q M +P+ + +
Sbjct: 302 CGRWHTLAYVSDLGKVFSFGSGKDGQLGNGG--TRDQLMPLPVKVSS 346
Score = 111 bits (277), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 126/262 (48%), Gaps = 33/262 (12%)
Query: 39 KVRSVVAGSRNSLAICDDGKTKTENIPSQVNA-----LSNTKIVQAAIGGWHCLAVDDQG 93
K+ SV G+ + L + DGK + S + L KI+Q G +H LA+ G
Sbjct: 98 KIHSVDQGAEHMLILSSDGKPFEYDNYSMKHLRFESILQEKKIIQITCGDYHSLALSKGG 157
Query: 94 RAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLI-------VRQVAAGGTHS 146
+AWG N +GQ G GR P P+++ + Q++AG HS
Sbjct: 158 ELFAWGQNLHGQLG--------VGR------KFPSTTTPQIVEHLAGVPLAQISAGEAHS 203
Query: 147 VVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGL--EQVKLIAVGAFHNLALQEDGA 200
+ L+ G++++WG+ G + P ++GL ++V+ +A G H+ L +DG
Sbjct: 204 MALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGL 263
Query: 201 LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDD-GEVYGWGRG 259
L+ +G ++GQLG TQ +P V L G + IA G WH+ A D G+V+ +G G
Sbjct: 264 LFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSG 323
Query: 260 EHGRLGFGDNDKSSKMVPQKVN 281
+ G+LG G +P KV+
Sbjct: 324 KDGQLGNGGTRDQLMPLPVKVS 345
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 17/124 (13%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDG--- 57
++ + +I +WG E GQLG+G+ E ++ +++ L+ KV V G +S + DG
Sbjct: 206 LSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLF 265
Query: 58 -------------KTKTENIPSQVNALSNTKIVQAAIGGWHCLA-VDDQGRAYAWGGNEY 103
T+ E P V L ++ Q A G WH LA V D G+ +++G +
Sbjct: 266 TFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKD 325
Query: 104 GQCG 107
GQ G
Sbjct: 326 GQLG 329
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 126/312 (40%), Gaps = 45/312 (14%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVC-VVKALEPYKVRSVVAGSRNSLAICDDGK------- 58
+ AWG GQLG+G +V+ L + + AG +S+A+ G
Sbjct: 159 LFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKN 218
Query: 59 ---------TKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 109
T++++ PS + L N K+ A GG H + G + +G ++GQ G
Sbjct: 219 ECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHN 278
Query: 110 PERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTRE-GHVWTW-----GQPWP 163
+ + R ++ + + V Q+A G H++ + G V+++ GQ
Sbjct: 279 STQNE------LRPCLVAELVGYR--VTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGN 330
Query: 164 PGDIKQIS-VPVRVQGLEQVKLIAVGAFHNLAL----QEDGALWAWGNNEYGQLGTGDTQ 218
G Q+ +PV+V E++KL + + L + + LW N Y L
Sbjct: 331 GGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSYVNLK----- 385
Query: 219 PRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQ 278
R+ P +G + D+ W ST + E++ G F ++++M+P
Sbjct: 386 -RTIPTLNEGTVKRWIADVETKRWQSTK-REIQEIFSSPACLTG--SFLRKRRTTEMMPV 441
Query: 279 KVNLLAGEDIVQ 290
++L +I +
Sbjct: 442 YLDLNKARNIFK 453
>sp|Q9R0X5|RPGR_MOUSE X-linked retinitis pigmentosa GTPase regulator OS=Mus musculus
GN=Rpgr PE=1 SV=2
Length = 1001
Score = 121 bits (304), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 142/307 (46%), Gaps = 26/307 (8%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P+ + AL K+ AA G H L D G YA GGN GQ G D R I
Sbjct: 78 PTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLG----LGDTDDRDTFHQI 133
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWP----PGDIKQISVPVRVQGLE 180
V P ++Q++AG S LT +G ++ WG D + +P V +
Sbjct: 134 VF---FTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGK 190
Query: 181 QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLT--LVDIA 238
+ I+ G +H+ + DG L+ +G E G+LG + + P Q + G+ ++ +A
Sbjct: 191 PISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSP-QRVLGIPERVIQVA 249
Query: 239 AGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHS 298
GG H+ LT+ VY +G G+ G+LG G + P+ + + + I +SCG H+
Sbjct: 250 CGGGHTVVLTEKV-VYAFGLGQFGQLGLGTFLFETSE-PKIIERIKDQKICHISCGENHT 307
Query: 299 VALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACG 358
+T G +++FG G HG+LG G + T Q P + + R+ +L+ACG
Sbjct: 308 ALMTELGLLYTFGDGRHGKLGLGMENFTNQFF--------PTLCSNFL--RFAVQLIACG 357
Query: 359 GRHTLAI 365
G H L
Sbjct: 358 GCHMLVF 364
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 122/237 (51%), Gaps = 24/237 (10%)
Query: 139 VAAGGTHSVVLTREGHVW-----TWGQPWPPGDIKQISVPVRVQGL--EQVKLIAVGAFH 191
++ G H+ ++T ++ WGQ G I P ++ L E+VKL A G H
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQ-LGLGSKAAIIKPTCIKALKPEKVKLAACGRNH 98
Query: 192 NLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLS-GLTLVDIAAGGWHSTALTDD 250
L + G ++A G N GQLG GDT R + + T+ ++AG S ALT+D
Sbjct: 99 TLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTED 158
Query: 251 GEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSF 310
G+++ WG G++G DKS+ +P +V + G+ I +SCG HS +T DG +++F
Sbjct: 159 GKLFMWGDNSEGQIGL--EDKSNVCIPHEVTV--GKPISWISCGYYHSAFVTMDGELYTF 214
Query: 311 GRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
G ++G+LG P E+ +N +P+ G+ R I VACGG HT+ + E
Sbjct: 215 GEPENGKLGL--------PNELLMNHRSPQRVL-GIPERVIQ--VACGGGHTVVLTE 260
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 149/329 (45%), Gaps = 40/329 (12%)
Query: 52 AICDDGKTK-TENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEP 110
A+ GKTK ENIPS+ N + + G H V + Y +G N +GQ G
Sbjct: 13 AVFTFGKTKFAENIPSKF-WFKNDIPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLG--- 68
Query: 111 ERKDDTGRILRRDIVIPQRCAPKL---IVRQVAAGGTHSVVLTREGHVWTWGQPWP---- 163
+ + +I C L V+ A G H++V T G V+ G
Sbjct: 69 --------LGSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLG 120
Query: 164 ---PGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPR 220
D V + +K ++ GA + AL EDG L+ WG+N GQ+G D
Sbjct: 121 LGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKS-- 178
Query: 221 SQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV 280
+ IP + G + I+ G +HS +T DGE+Y +G E+G+LG + + PQ+V
Sbjct: 179 NVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRV 238
Query: 281 NLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKV-TTGQPMEVPINIPAP 339
L E ++QV+CGG H+V LT + +++FG G G+LG G + T +P +
Sbjct: 239 -LGIPERVIQVACGGGHTVVLT-EKVVYAFGLGQFGQLGLGTFLFETSEPKII------- 289
Query: 340 RNAGDGVDRRWIAKLVACGGRHTLAIVEW 368
+ + + I ++CG HT + E
Sbjct: 290 ----ERIKDQKICH-ISCGENHTALMTEL 313
>sp|Q6NXM2|RCBT1_MOUSE RCC1 and BTB domain-containing protein 1 OS=Mus musculus GN=Rcbtb1
PE=2 SV=1
Length = 531
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 144/291 (49%), Gaps = 39/291 (13%)
Query: 87 LAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQR----CAPKLIVRQVAAG 142
+ V D + +G N Y C G + ++P++ C K ++ ++ G
Sbjct: 35 IYVTDNDEVFVFGLN-YSNC---------LGTGDNQSTLVPKKLEALCGKK--IKSLSYG 82
Query: 143 -GTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQG---LEQVKLIAVGAFHNLA 194
G H ++ T +G V+ WG G Q PV+V ++QV +A G+ H++A
Sbjct: 83 SGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMA 142
Query: 195 LQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQG-LSGLTLVDIAAGGWHSTALTDDGEV 253
L DG L+AWG N GQ+G+G T + P V L +V+IA G S A+ D GEV
Sbjct: 143 LAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEV 202
Query: 254 YGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRG 313
YGWG +G+LG G+N +++ P +V L G + Q+ CG H++ALT +G ++++G
Sbjct: 203 YGWGYNGNGQLGLGNN--GNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 314 DHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLA 364
+G+LG G K P ++ V++ + ++ AC HT A
Sbjct: 261 TYGQLGTGSKNNLLSPTQIM------------VEKERVIEIAACHSTHTSA 299
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 130/269 (48%), Gaps = 26/269 (9%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIG-GWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDD 115
G ++ +P ++ AL KI + G G H L + G YAWG N Y Q G +
Sbjct: 57 GDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQG- 115
Query: 116 TGRILRRDIVIPQRCAPKLIVRQV---AAGGTHSVVLTREGHVWTWGQ----PWPPGDIK 168
+ P + L+++QV A G HS+ L +G ++ WG G
Sbjct: 116 ---------IAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTA 166
Query: 169 QISVPVRVQGLEQVKL---IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIP 225
P +V K IA G ++A+ + G ++ WG N GQLG G+ + P+
Sbjct: 167 NQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVR 226
Query: 226 VQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAG 285
V L G+ + I G H+ ALTD+G +Y WG +G+LG G K++ + P ++ ++
Sbjct: 227 VAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG--SKNNLLSPTQI-MVEK 283
Query: 286 EDIVQV-SCGGTH-SVALTRDGHIFSFGR 312
E ++++ +C TH S A T+ GH++ +G+
Sbjct: 284 ERVIEIAACHSTHTSAAKTQGGHVYMWGQ 312
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 16/207 (7%)
Query: 162 WPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS 221
WP I + P + + + A + + ++ ++ +G N LGTGD Q
Sbjct: 7 WP---IFTLLSPQEAGSIRKACVFGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTL 63
Query: 222 QPIPVQGLSGLTLVDIAAG-GWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV 280
P ++ L G + ++ G G H T+DG VY WG + +LG G ++ V
Sbjct: 64 VPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCT 123
Query: 281 NLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPR 340
NLL + +++V+CG HS+AL DG +F++G + G++G G N P PR
Sbjct: 124 NLLI-KQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTA----------NQPTPR 172
Query: 341 NAGDGVDRRWIAKLVACGGRHTLAIVE 367
+ + + + +ACG ++A+++
Sbjct: 173 KVTNCLHTKRVVN-IACGQTSSMAVLD 198
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 30/180 (16%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREW-VCVVKALEPYKVRSVVAGSRNSLAICDDGKT 59
+A+ + AWG GQ+G G+ + V L +V ++ G +S+A+ D G+
Sbjct: 143 LAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEV 202
Query: 60 K----------------TENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 103
+ P +V AL + Q G H LA+ D+G YAWG N Y
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTY 262
Query: 104 GQCGEEPERKDDTGRILRRDIVIPQRCA--PKLIVRQVAAGGTH-SVVLTREGHVWTWGQ 160
GQ G TG + +++ P + + ++ A TH S T+ GHV+ WGQ
Sbjct: 263 GQLG--------TGS--KNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ 312
>sp|Q92834|RPGR_HUMAN X-linked retinitis pigmentosa GTPase regulator OS=Homo sapiens
GN=RPGR PE=1 SV=2
Length = 1020
Score = 118 bits (295), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 147/307 (47%), Gaps = 26/307 (8%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P+ V AL K+ AA G H L + G YA GGN GQ G + +T ++
Sbjct: 78 PTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVI---- 133
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWP----PGDIKQISVPVRVQGLE 180
+ ++Q++AG S LT +G ++ WG ++ + VP +V +
Sbjct: 134 ---SFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGK 190
Query: 181 QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGL--TLVDIA 238
V I+ G +H+ + DG L+ +G E G+LG + + P Q +S + ++ +A
Sbjct: 191 PVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTP-QLVSEIPEKVIQVA 249
Query: 239 AGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHS 298
GG H+ LT++ VY +G G+ G+LG G + P+ + + + I +SCG H+
Sbjct: 250 CGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSE-PKVIENIRDQTISYISCGENHT 307
Query: 299 VALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACG 358
+T G +++FG G HG+LG G +E N P + + R+I KLVACG
Sbjct: 308 ALITDIGLMYTFGDGRHGKLGLG--------LENFTNHFIPTLCSNFL--RFIVKLVACG 357
Query: 359 GRHTLAI 365
G H +
Sbjct: 358 GCHMVVF 364
Score = 105 bits (262), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 147/327 (44%), Gaps = 38/327 (11%)
Query: 52 AICDDGKTK-TENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEP 110
A+ GK+K EN P + N V + G H V + Y +G N +GQ G
Sbjct: 13 AVFTFGKSKFAENNPGKF-WFKNDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLG--- 68
Query: 111 ERKDDTGRILRRDIVIPQRCAPKL---IVRQVAAGGTHSVVLTREGHVWTWG----QPWP 163
+ + + C L V+ A G H++V T G+V+ G
Sbjct: 69 --------LGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLG 120
Query: 164 PGDIKQ---ISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPR 220
GD ++ V ++K ++ G+ + AL EDG L+ WG+N GQ+G +
Sbjct: 121 LGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVS-- 178
Query: 221 SQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV 280
+ +P Q G + I+ G +HS +T DGE+Y +G E+G+LG + + PQ V
Sbjct: 179 NVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLV 238
Query: 281 NLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPR 340
+ + E ++QV+CGG H+V LT + +++FG G G+LG G + +V NI
Sbjct: 239 SEIP-EKVIQVACGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENI---- 292
Query: 341 NAGDGVDRRWIAKLVACGGRHTLAIVE 367
R ++CG HT I +
Sbjct: 293 -------RDQTISYISCGENHTALITD 312
Score = 101 bits (252), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 143/322 (44%), Gaps = 40/322 (12%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK-------- 58
+ +GS GQLG+G+ VKAL+P KV+ G ++L + G
Sbjct: 56 LYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNN 115
Query: 59 --------TKTENIPSQVNAL-SNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 109
T+ N ++ S KI Q + G A+ + GR + WG N GQ G
Sbjct: 116 EGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIG-- 173
Query: 110 PERKDDTGRILRR--DIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQP------ 161
L+ ++ +PQ+ V ++ G HS +T +G ++ +G+P
Sbjct: 174 ----------LKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLG 223
Query: 162 WPPGDIKQISVPVRVQGL-EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQ-P 219
P + P V + E+V +A G H + L E+ A++ +G ++GQLG G
Sbjct: 224 LPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTEN-AVYTFGLGQFGQLGLGTFLFE 282
Query: 220 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 279
S+P ++ + T+ I+ G H+ +TD G +Y +G G HG+LG G + ++ +P
Sbjct: 283 TSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTL 342
Query: 280 VNLLAGEDIVQVSCGGTHSVAL 301
+ + V+CGG H V
Sbjct: 343 CSNFLRFIVKLVACGGCHMVVF 364
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 62/127 (48%), Gaps = 12/127 (9%)
Query: 195 LQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVY 254
+ + GA++ +G +++ + G ++ +PV ++ G HS +T + ++Y
Sbjct: 8 MPDSGAVFTFGKSKFAENNPGKFWFKND-VPVH---------LSCGDEHSAVVTGNNKLY 57
Query: 255 GWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGD 314
+G G+LG G SK P V L E + +CG H++ T G++++ G +
Sbjct: 58 MFGSNNWGQLGLGSKSAISK--PTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNN 115
Query: 315 HGRLGYG 321
G+LG G
Sbjct: 116 EGQLGLG 122
>sp|Q8NDN9|RCBT1_HUMAN RCC1 and BTB domain-containing protein 1 OS=Homo sapiens GN=RCBTB1
PE=2 SV=1
Length = 531
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 145/293 (49%), Gaps = 43/293 (14%)
Query: 87 LAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQR----CAPKLIVRQVAAG 142
L V D + +G N Y C G + ++P++ C K ++ ++ G
Sbjct: 35 LYVTDNDEVFVFGLN-YSNC---------LGTGDNQSTLVPKKLEGLCGKK--IKSLSYG 82
Query: 143 -GTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQG---LEQVKLIAVGAFHNLA 194
G H ++ T +G V+ WG G Q PV+V ++QV +A G+ H++A
Sbjct: 83 SGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMA 142
Query: 195 LQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTL---VDIAAGGWHSTALTDDG 251
L DG ++AWG N GQ+G+G T +QP P + + L + V IA G S A+ D+G
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTA--NQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 252 EVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFG 311
EVYGWG +G+LG G+N +++ P +V L + Q+ CG H++ALT +G ++++G
Sbjct: 201 EVYGWGYNGNGQLGLGNN--GNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Query: 312 RGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLA 364
+G+LG G K P + V++ + ++ AC HT A
Sbjct: 259 ANTYGQLGTGNKNNLLSPAHIM------------VEKERVVEIAACHSAHTSA 299
Score = 105 bits (263), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 129/269 (47%), Gaps = 26/269 (9%)
Query: 57 GKTKTENIPSQVNALSNTKIVQAAIG-GWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDD 115
G ++ +P ++ L KI + G G H L + G YAWG N Y Q G +
Sbjct: 57 GDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQG- 115
Query: 116 TGRILRRDIVIPQRCAPKLIVRQV---AAGGTHSVVLTREGHVWTWGQ----PWPPGDIK 168
+ P + L+++QV A G HS+ L +G V+ WG G
Sbjct: 116 ---------IAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTA 166
Query: 169 QISVPVRVQGLEQVKL---IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIP 225
P +V +K IA G ++A+ ++G ++ WG N GQLG G+ + P+
Sbjct: 167 NQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVR 226
Query: 226 VQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAG 285
V L + + I G H+ ALTD+G +Y WG +G+LG G +K++ + P + ++
Sbjct: 227 VAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG--NKNNLLSPAHI-MVEK 283
Query: 286 EDIVQV-SCGGTH-SVALTRDGHIFSFGR 312
E +V++ +C H S A T+ GH++ +G+
Sbjct: 284 ERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 16/207 (7%)
Query: 162 WPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS 221
WP I + P + + + + A L + ++ ++ +G N LGTGD Q
Sbjct: 7 WP---IFTLLSPQEIASIRKACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL 63
Query: 222 QPIPVQGLSGLTLVDIAAG-GWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV 280
P ++GL G + ++ G G H T+DG VY WG + +LG G ++ V
Sbjct: 64 VPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCT 123
Query: 281 NLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPR 340
NLL + +V+V+CG HS+AL DG +F++G + G++G G N P PR
Sbjct: 124 NLLI-KQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTA----------NQPTPR 172
Query: 341 NAGDGVDRRWIAKLVACGGRHTLAIVE 367
+ + + + +ACG ++A+++
Sbjct: 173 KVTNCLHIKRVVG-IACGQTSSMAVLD 198
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 77/178 (43%), Gaps = 26/178 (14%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREW-VCVVKALEPYKVRSVVAGSRNSLAICDDGKT 59
+A+ + AWG GQ+G G+ + V L +V + G +S+A+ D+G+
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEV 202
Query: 60 K----------------TENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 103
+ P +V AL + + Q G H LA+ D+G YAWG N Y
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTY 262
Query: 104 GQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTH-SVVLTREGHVWTWGQ 160
GQ G + +L ++ ++ + +V A H S T+ GHV+ WGQ
Sbjct: 263 GQLG-----TGNKNNLLSPAHIMVEK---ERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312
>sp|Q80YD6|SRGEF_MOUSE Secretion-regulating guanine nucleotide exchange factor OS=Mus
musculus GN=Sergef PE=2 SV=2
Length = 464
Score = 115 bits (288), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 170/392 (43%), Gaps = 79/392 (20%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTK 60
+++ + AWG+ GQLG+G+ E+
Sbjct: 11 VSAAAVLFAWGANSYGQLGLGHKEDV---------------------------------- 36
Query: 61 TENIPSQVNALSNTKIVQAAIGGW-HCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRI 119
+P Q++ +++ GG H V D G + G N+ GQ G T +
Sbjct: 37 --FLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGLNKDGQLG-----LGHTEEV 89
Query: 120 LRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWT-----WGQPWPPGDIKQISVPV 174
LR I P R P +RQVA G +++LT +G V + +GQ P ++ VP
Sbjct: 90 LRFTICKPLRGCP---IRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHGPRKCVVPQ 146
Query: 175 RVQGL-EQVKLIAVGAFHNLALQEDGALWAWGNNEYG---QLGTGDTQP----RSQPIPV 226
++ L E+V +A G H LA G+++ WG +L G P +P V
Sbjct: 147 AIECLREKVVCVAAGLRHALATTATGSVFQWGTGLASSGRRLCPGQNLPLFLTAKEPSRV 206
Query: 227 QGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV--NLLA 284
GL T V AG HS +LTD GE+Y WGR +HG+L + +PQ++ +
Sbjct: 207 TGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQLA---SRAVFLPLPQRIEAHYFQ 263
Query: 285 GEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQ-PMEV--------PIN 335
E + V G TH VA T G +F++GR D+G+LG + Q P+E P N
Sbjct: 264 DEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQGPQN 323
Query: 336 -IPAPRNAGDGVDRRWIAKLVACGGRHTLAIV 366
+P+P + G A ++CG H LA++
Sbjct: 324 SVPSPLHCLTG------ATEISCGSEHNLAVI 349
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 136/352 (38%), Gaps = 73/352 (20%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKT------- 59
+ G +DGQLG+G+ EE + K L +R V G ++ + + G+
Sbjct: 70 LFVCGLNKDGQLGLGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNA 129
Query: 60 ----------KTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 109
+ +P + L K+V A G H LA G + WG
Sbjct: 130 FGQLGVPHGPRKCVVPQAIECLRE-KVVCVAAGLRHALATTATGSVFQWGTG-------- 180
Query: 110 PERKDDTGRILRRDIVIPQRCAPKLIVRQV----------AAGGTHSVVLTREGHVWTWG 159
+GR L +P K R AG HS LT G ++ WG
Sbjct: 181 ---LASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWG 237
Query: 160 QPWPPGDIKQ----ISVPVRVQGL----EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQ 211
+ G + + +P R++ E+V + G H +A E G ++ WG +YGQ
Sbjct: 238 RN-KHGQLASRAVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQ 296
Query: 212 LGTGDTQPRSQ------------------PIPVQGLSGLTLVDIAAGGWHSTALTDDGEV 253
LG P +Q P P+ L+G T +I+ G H+ A+ D +
Sbjct: 297 LGRRLEPPEAQKPVEQDSSLAFQGPQNSVPSPLHCLTGAT--EISCGSEHNLAVIRD-KC 353
Query: 254 YGWGRGEHGRLGFGDNDKSSKMVPQKVNLL--AGEDIVQVSCGGTHSVALTR 303
WG EHG G D +S+ P V L + ++ V CG HS+A+ +
Sbjct: 354 CSWGWNEHGMCG--DGTESNVWTPTPVQALPPSPSRLLLVGCGAGHSLAVCQ 403
>sp|Q5RCZ7|RCBT2_PONAB RCC1 and BTB domain-containing protein 2 OS=Pongo abelii GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 114 bits (286), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 119/232 (51%), Gaps = 26/232 (11%)
Query: 143 GTHSVVLTREGHVWTWGQPWPP----GDIKQISVPVRVQ---GLEQVKLIAVGAFHNLAL 195
G H V+ T EG V+TWG G VP + +QV +A G++H+L L
Sbjct: 108 GPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVL 167
Query: 196 QEDGALWAWGNNEYGQLGTGDTQPRSQPIP--VQG-LSGLTLVDIAAGGWHSTALTDDGE 252
DG ++AWG N GQ+G+G T +QPIP V G L +V IA G A+ D GE
Sbjct: 168 TSDGEVFAWGYNNSGQVGSGST--VNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGE 225
Query: 253 VYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGR 312
VY WG +G+LG G++ ++ P +V L G + +V+CG H++ LT +G ++++G
Sbjct: 226 VYVWGYNGNGQLGLGNS--GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 283
Query: 313 GDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLA 364
+G+LG G K + Q P+ + R I ++ AC HT A
Sbjct: 284 NSYGQLGTGNK--SNQSYPTPVTVEKDR----------IIEIAACHSTHTSA 323
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 126/260 (48%), Gaps = 24/260 (9%)
Query: 65 PSQVNALSNTKIVQAAIG-GWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRD 123
P ++++L+ KI + G G H + +G + WG N Y Q G
Sbjct: 89 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHG--------- 139
Query: 124 IVIPQRCAPKLIVRQV---AAGGTHSVVLTREGHVWTWGQPWP----PGDIKQISVPVRV 176
++P + L +QV A G HS+VLT +G V+ WG G +P RV
Sbjct: 140 -LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRV 198
Query: 177 QGLEQVKL---IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLT 233
G Q K+ IA G +A+ + G ++ WG N GQLG G++ + P V L G+
Sbjct: 199 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 258
Query: 234 LVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSC 293
+ +A G H+ LTD+G+VY WG +G+LG G +KS++ P V + I +C
Sbjct: 259 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG--NKSNQSYPTPVTVEKDRIIEIAAC 316
Query: 294 GGTH-SVALTRDGHIFSFGR 312
TH S A T+ GH++ +G+
Sbjct: 317 HSTHTSAAKTQGGHVYMWGQ 336
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 18/208 (8%)
Query: 162 WPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS 221
WP I + +Q + Q + L + ++ G N G LG GD Q
Sbjct: 31 WP---IFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI 87
Query: 222 QPIPVQGLSGLTLVDIAAG-GWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV 280
+P + L+G + ++ G G H T +GEV+ WG + +LG G + +VP +
Sbjct: 88 EPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHG--LVPCHI 145
Query: 281 NL-LAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
+ L+ + +++V+CG HS+ LT DG +F++G + G++G G V N P P
Sbjct: 146 STNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTV----------NQPIP 195
Query: 340 RNAGDGVDRRWIAKLVACGGRHTLAIVE 367
R G + + +ACG +A+V+
Sbjct: 196 RRV-TGCLQNKVVVTIACGQMCCMAVVD 222
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 72/178 (40%), Gaps = 26/178 (14%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVC-VVKALEPYKVRSVVAGSRNSLAICDDGKT 59
+ S + AWG GQ+G G+ + V L+ V ++ G +A+ D G+
Sbjct: 167 LTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEV 226
Query: 60 KT----------------ENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 103
+ P +V AL ++ + A G H L + D+G+ YAWG N Y
Sbjct: 227 YVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSY 286
Query: 104 GQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTH-SVVLTREGHVWTWGQ 160
GQ G TG + P I+ A TH S T+ GHV+ WGQ
Sbjct: 287 GQLG--------TGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 336
>sp|Q99LJ7|RCBT2_MOUSE RCC1 and BTB domain-containing protein 2 OS=Mus musculus GN=Rcbtb2
PE=2 SV=1
Length = 551
Score = 114 bits (286), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 121/242 (50%), Gaps = 26/242 (10%)
Query: 133 KLIVRQVAAGGTHSVVLTREGHVWTWGQPWPP----GDIKQISVPVRVQ---GLEQVKLI 185
K I G H V+ T +G V+TWG G VP + +QV +
Sbjct: 98 KKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 157
Query: 186 AVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIP--VQG-LSGLTLVDIAAGGW 242
A G++H+L L DG ++AWG N GQ+G+G T +QPIP V G L +++IA G
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA--NQPIPRRVTGCLQNKVVMNIACGQM 215
Query: 243 HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALT 302
S A+ D GEVY WG +G+LG G + ++ P +V L G + +V+CG H++ LT
Sbjct: 216 CSMAVVDTGEVYVWGYNGNGQLGLGSS--GNQPTPCRVAALQGIRVQRVACGYAHTLVLT 273
Query: 303 RDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHT 362
+G I+++G +G+LG G K P V V++ I ++ AC HT
Sbjct: 274 DEGQIYAWGANSYGQLGTGNKSNQSYPTPVV------------VEKDRIIEIAACHSAHT 321
Query: 363 LA 364
A
Sbjct: 322 SA 323
Score = 111 bits (278), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 124/260 (47%), Gaps = 24/260 (9%)
Query: 65 PSQVNALSNTKIVQAAIG-GWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRD 123
P ++++L+ KI + G G H + G + WG N Y Q G
Sbjct: 89 PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHG--------- 139
Query: 124 IVIPQRCAPKLIVRQV---AAGGTHSVVLTREGHVWTWGQPWP----PGDIKQISVPVRV 176
++P + L +QV A G HS+VLT +G V+ WG G +P RV
Sbjct: 140 -LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRV 198
Query: 177 QGLEQVKL---IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLT 233
G Q K+ IA G ++A+ + G ++ WG N GQLG G + + P V L G+
Sbjct: 199 TGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 258
Query: 234 LVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSC 293
+ +A G H+ LTD+G++Y WG +G+LG G +KS++ P V + I +C
Sbjct: 259 VQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTG--NKSNQSYPTPVVVEKDRIIEIAAC 316
Query: 294 GGTH-SVALTRDGHIFSFGR 312
H S A T+ GH++ +G+
Sbjct: 317 HSAHTSAAKTQGGHVYMWGQ 336
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 18/208 (8%)
Query: 162 WPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS 221
WP I + +Q + Q + L + ++ G N G LG GD Q
Sbjct: 31 WP---IFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTI 87
Query: 222 QPIPVQGLSGLTLVDIAAG-GWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV 280
+P + L+G + ++ G G H T DGEV+ WG + +LG G + +VP +
Sbjct: 88 EPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHG--LVPCHI 145
Query: 281 NL-LAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
+ L+ + +++V+CG HS+ LT DG +F++G + G++G G N P P
Sbjct: 146 STNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA----------NQPIP 195
Query: 340 RNAGDGVDRRWIAKLVACGGRHTLAIVE 367
R + + + +ACG ++A+V+
Sbjct: 196 RRVTGCLQNKVVMN-IACGQMCSMAVVD 222
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 72/178 (40%), Gaps = 26/178 (14%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVC-VVKALEPYKVRSVVAGSRNSLAICDDGKT 59
+ S + AWG GQ+G G+ + V L+ V ++ G S+A+ D G+
Sbjct: 167 LTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEV 226
Query: 60 KT----------------ENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 103
+ P +V AL ++ + A G H L + D+G+ YAWG N Y
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSY 286
Query: 104 GQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTH-SVVLTREGHVWTWGQ 160
GQ G TG + P I+ A H S T+ GHV+ WGQ
Sbjct: 287 GQLG--------TGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ 336
>sp|O95199|RCBT2_HUMAN RCC1 and BTB domain-containing protein 2 OS=Homo sapiens GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 114 bits (286), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 119/232 (51%), Gaps = 26/232 (11%)
Query: 143 GTHSVVLTREGHVWTWGQPWPP----GDIKQISVPVRVQ---GLEQVKLIAVGAFHNLAL 195
G H V+ T EG V+TWG G VP + +QV +A G++H+L L
Sbjct: 108 GPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVL 167
Query: 196 QEDGALWAWGNNEYGQLGTGDTQPRSQPIP--VQG-LSGLTLVDIAAGGWHSTALTDDGE 252
DG ++AWG N GQ+G+G T +QPIP V G L +V IA G A+ D GE
Sbjct: 168 TSDGEVFAWGYNNSGQVGSGST--VNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGE 225
Query: 253 VYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGR 312
VY WG +G+LG G++ ++ P +V L G + +V+CG H++ LT +G ++++G
Sbjct: 226 VYVWGYNGNGQLGLGNS--GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 283
Query: 313 GDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLA 364
+G+LG G K + Q P+ + R I ++ AC HT A
Sbjct: 284 NSYGQLGTGNK--SNQSYPTPVTVEKDR----------IIEIAACHSTHTSA 323
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 126/260 (48%), Gaps = 24/260 (9%)
Query: 65 PSQVNALSNTKIVQAAIG-GWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRD 123
P ++++L+ KI + G G H + +G + WG N Y Q G
Sbjct: 89 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHG--------- 139
Query: 124 IVIPQRCAPKLIVRQV---AAGGTHSVVLTREGHVWTWGQPWP----PGDIKQISVPVRV 176
++P + L +QV A G HS+VLT +G V+ WG G +P RV
Sbjct: 140 -LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRV 198
Query: 177 QGLEQVKL---IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLT 233
G Q K+ IA G +A+ + G ++ WG N GQLG G++ + P V L G+
Sbjct: 199 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 258
Query: 234 LVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSC 293
+ +A G H+ LTD+G+VY WG +G+LG G +KS++ P V + I +C
Sbjct: 259 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG--NKSNQSYPTPVTVEKDRIIEIAAC 316
Query: 294 GGTH-SVALTRDGHIFSFGR 312
TH S A T+ GH++ +G+
Sbjct: 317 HSTHTSAAKTQGGHVYMWGQ 336
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 18/208 (8%)
Query: 162 WPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS 221
WP I + +Q + Q + L + ++ G N G LG GD Q
Sbjct: 31 WP---IFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI 87
Query: 222 QPIPVQGLSGLTLVDIAAG-GWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV 280
+P + L+G + ++ G G H T +GEV+ WG + +LG G + +VP +
Sbjct: 88 EPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHG--LVPCHI 145
Query: 281 NL-LAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
+ L+ + +++V+CG HS+ LT DG +F++G + G++G G V N P P
Sbjct: 146 STNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTV----------NQPIP 195
Query: 340 RNAGDGVDRRWIAKLVACGGRHTLAIVE 367
R G + + +ACG +A+V+
Sbjct: 196 RRV-TGCLQNKVVVTIACGQMCCMAVVD 222
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 72/178 (40%), Gaps = 26/178 (14%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVC-VVKALEPYKVRSVVAGSRNSLAICDDGKT 59
+ S + AWG GQ+G G+ + V L+ V ++ G +A+ D G+
Sbjct: 167 LTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEV 226
Query: 60 KT----------------ENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 103
+ P +V AL ++ + A G H L + D+G+ YAWG N Y
Sbjct: 227 YVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSY 286
Query: 104 GQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTH-SVVLTREGHVWTWGQ 160
GQ G TG + P I+ A TH S T+ GHV+ WGQ
Sbjct: 287 GQLG--------TGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 336
>sp|Q6P798|RCBT2_RAT RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus
GN=Rcbtb2 PE=2 SV=1
Length = 551
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 120/242 (49%), Gaps = 26/242 (10%)
Query: 133 KLIVRQVAAGGTHSVVLTREGHVWTWGQPWPP----GDIKQISVPVRVQ---GLEQVKLI 185
K I G H V+ T +G V+TWG G VP + +QV +
Sbjct: 98 KKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 157
Query: 186 AVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIP--VQG-LSGLTLVDIAAGGW 242
A G++H+L L DG ++AWG N GQ+G+G T +QPIP V G L ++ IA G
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA--NQPIPRRVTGCLQNKVVMSIACGQM 215
Query: 243 HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALT 302
S A+ D GEVY WG +G+LG G + ++ P +V L G + +V+CG H++ LT
Sbjct: 216 CSMAVVDTGEVYVWGYNGNGQLGLGSS--GNQPTPCRVAALQGIRVQRVACGYAHTLVLT 273
Query: 303 RDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHT 362
+G I+++G +G+LG G K P V V++ I ++ AC HT
Sbjct: 274 DEGQIYAWGANSYGQLGTGNKSNQSYPTPVV------------VEKDRIIEIAACHSAHT 321
Query: 363 LA 364
A
Sbjct: 322 SA 323
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 124/260 (47%), Gaps = 24/260 (9%)
Query: 65 PSQVNALSNTKIVQAAIG-GWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRD 123
P ++++L+ KI + G G H + G + WG N Y Q G
Sbjct: 89 PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHG--------- 139
Query: 124 IVIPQRCAPKLIVRQV---AAGGTHSVVLTREGHVWTWGQPWP----PGDIKQISVPVRV 176
++P + L +QV A G HS+VLT +G V+ WG G +P RV
Sbjct: 140 -LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRV 198
Query: 177 QGLEQVKL---IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLT 233
G Q K+ IA G ++A+ + G ++ WG N GQLG G + + P V L G+
Sbjct: 199 TGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 258
Query: 234 LVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSC 293
+ +A G H+ LTD+G++Y WG +G+LG G +KS++ P V + I +C
Sbjct: 259 VQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTG--NKSNQSYPTPVVVEKDRIIEIAAC 316
Query: 294 GGTH-SVALTRDGHIFSFGR 312
H S A ++ GH++ +G+
Sbjct: 317 HSAHTSAAKSQGGHVYMWGQ 336
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 18/208 (8%)
Query: 162 WPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS 221
WP I + +Q + Q + L + ++ G N G LG GD Q
Sbjct: 31 WP---IFSLCSEEELQLIRQACVFGTAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTI 87
Query: 222 QPIPVQGLSGLTLVDIAAG-GWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV 280
+P + L+G + ++ G G H T DGEV+ WG + +LG G + +VP +
Sbjct: 88 EPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHG--LVPCHI 145
Query: 281 NL-LAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAP 339
+ L+ + +++V+CG HS+ LT DG +F++G + G++G G N P P
Sbjct: 146 STNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA----------NQPIP 195
Query: 340 RNAGDGVDRRWIAKLVACGGRHTLAIVE 367
R G + + +ACG ++A+V+
Sbjct: 196 RRV-TGCLQNKVVMSIACGQMCSMAVVD 222
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 72/178 (40%), Gaps = 26/178 (14%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVC-VVKALEPYKVRSVVAGSRNSLAICDDGKT 59
+ S + AWG GQ+G G+ + V L+ V S+ G S+A+ D G+
Sbjct: 167 LTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEV 226
Query: 60 KT----------------ENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 103
+ P +V AL ++ + A G H L + D+G+ YAWG N Y
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSY 286
Query: 104 GQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTH-SVVLTREGHVWTWGQ 160
GQ G TG + P I+ A H S ++ GHV+ WGQ
Sbjct: 287 GQLG--------TGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKSQGGHVYMWGQ 336
>sp|P18754|RCC1_HUMAN Regulator of chromosome condensation OS=Homo sapiens GN=RCC1 PE=1
SV=1
Length = 421
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 185/411 (45%), Gaps = 81/411 (19%)
Query: 7 IIAWGSGEDGQLGIGNN-EEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTK----- 60
++ G G+ GQLG+G N ER+ +V P V AG +++ + G+
Sbjct: 37 VLTLGQGDVGQLGLGENVMERKKPALVSI--PEDVVQAEAGGMHTVCLSKSGQVYSFGCN 94
Query: 61 -------------TENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGG--NEYGQ 105
+E +P +V K+VQ + G H A+ D GR + WG + G
Sbjct: 95 DEGALGRDTSVEGSEMVPGKVEL--QEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGV 152
Query: 106 CG-EEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPP 164
G EP +K ++P + + V +VA+G H V+LT +G ++T G
Sbjct: 153 IGLLEPMKKS----------MVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLG----C 198
Query: 165 GDIKQI-SVPVRV------QGLEQV---KLIAV----------------GAFHNLALQED 198
G+ Q+ VP QGLE++ K + + GA+ A+ +
Sbjct: 199 GEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHE 258
Query: 199 GALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTL--VDIAAGGWHSTALTDDGEVYGW 256
G ++ +G + Y QLGT T+ P + T V + G H+ + +G+ Y
Sbjct: 259 GHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSL 318
Query: 257 GRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHG 316
GR E+GRLG G+ + K +P ++ L + V+CG + A+T+DG +F++G G +
Sbjct: 319 GRAEYGRLGLGEGAE-EKSIPTLISRLPA--VSSVACGASVGYAVTKDGRVFAWGMGTNY 375
Query: 317 RLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
+LG G+ P+E+ G ++ R + V+ GG+HT+ +V+
Sbjct: 376 QLGTGQDEDAWSPVEM---------MGKQLENRVVLS-VSSGGQHTVLLVK 416
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 143/341 (41%), Gaps = 42/341 (12%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKT- 59
++ + + ++G ++G LG + E + K KV V AG ++ A+ DDG+
Sbjct: 82 LSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVF 141
Query: 60 ------------------KTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGN 101
K +P QV + +V+ A G H + + G Y G
Sbjct: 142 LWGSFRDNNGVIGLLEPMKKSMVPVQVQL--DVPVVKVASGNDHLVMLTADGDLYTLGCG 199
Query: 102 EYGQCGEEPERKDDTG------RILRRDIVIPQRCAPKLIVR--QVAAGGTHSVVLTREG 153
E GQ G PE + G R+L V+ + + VR G + ++ EG
Sbjct: 200 EQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEG 259
Query: 154 HVWTWG-----QPWPPGDIKQISVPVRVQGLEQVKL----IAVGAFHNLALQEDGALWAW 204
HV+ +G Q PG + +P + + + G H + + +G ++
Sbjct: 260 HVYGFGLSNYHQLGTPG-TESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSL 318
Query: 205 GNNEYGQLGTGD-TQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGR 263
G EYG+LG G+ + +S P + L ++ +A G A+T DG V+ WG G + +
Sbjct: 319 GRAEYGRLGLGEGAEEKSIPTLISRLPAVS--SVACGASVGYAVTKDGRVFAWGMGTNYQ 376
Query: 264 LGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRD 304
LG G ++ + V L ++ VS GG H+V L +D
Sbjct: 377 LGTGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHTVLLVKD 417
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 111/237 (46%), Gaps = 30/237 (12%)
Query: 144 THSVVLTREGHVWTWGQPWPPGDIKQISV---------PVRVQGLEQVKLIAVGAFHNLA 194
+H T G V T GQ GD+ Q+ + P V E V G H +
Sbjct: 26 SHRSHSTEPGLVLTLGQ----GDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVC 81
Query: 195 LQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVY 254
L + G ++++G N+ G LG + S+ +P + +V ++AG H+ ALTDDG V+
Sbjct: 82 LSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVF 141
Query: 255 GWG--RGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGR 312
WG R +G +G + K S MVP +V L +V+V+ G H V LT DG +++ G
Sbjct: 142 LWGSFRDNNGVIGLLEPMKKS-MVPVQVQLDV--PVVKVASGNDHLVMLTADGDLYTLGC 198
Query: 313 GDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVEWQ 369
G+ G+LG VP + A R G++R + K V R + V +Q
Sbjct: 199 GEQGQLG-----------RVP-ELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQ 243
>sp|Q9UGK8|SRGEF_HUMAN Secretion-regulating guanine nucleotide exchange factor OS=Homo
sapiens GN=SERGEF PE=1 SV=2
Length = 458
Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 144/324 (44%), Gaps = 33/324 (10%)
Query: 64 IPSQVNALSNTKIVQAAIGGW-HCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRR 122
+P Q+N + V+ GG H V D G + G N+ GQ G G
Sbjct: 38 LPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLG--------LGHTEDI 89
Query: 123 DIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWT-----WGQPWPPGDIKQISVPVRVQ 177
P + ++QVA G +++LT G V + +GQ P ++ VP ++
Sbjct: 90 PYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIE 149
Query: 178 -GLEQVKLIAVGAFHNLALQEDGALWAWGNNEYG---QLGTGDTQP----RSQPIPVQGL 229
E+V IA G H +A G ++ WG +L G T P +P V GL
Sbjct: 150 LHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGL 209
Query: 230 SGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV--NLLAGED 287
+ + AG HS +LTD GEVY WG +HG+L N+ + VPQK+ + E
Sbjct: 210 ENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLA---NEAAFLPVPQKIEAHCFQNEK 266
Query: 288 IVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPME-----VPINIPAPRNA 342
+ + G TH VA T G +F++GR D+G+LG + G +E +P + P P +
Sbjct: 267 VTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRP-PNSM 325
Query: 343 GDGVDRRWIAKLVACGGRHTLAIV 366
A V+CG H LAI+
Sbjct: 326 PSSPHCLTGATEVSCGSEHNLAII 349
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 170/406 (41%), Gaps = 82/406 (20%)
Query: 15 DGQLGIGNNEEREWVCVVKAL----EPYKVRSVVAGSRNSLAICDDGKT----------- 59
GQLG+G+ E+ V + + L +P VR + G +S + D G
Sbjct: 25 YGQLGLGHKED---VLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQL 81
Query: 60 ---KTENIP--SQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG--EEPER 112
TE+IP + +L I Q A G + + + G+ + G N +GQ G P R
Sbjct: 82 GLGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRR 141
Query: 113 KDDTGRILRRDIVIPQRCA-PKLIVRQVAAGGTHSVVLTREGHVWTW-------GQPWPP 164
V+PQ K V +AAG H+V T G V+ W G+ P
Sbjct: 142 -----------CVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCP 190
Query: 165 GDIKQISV----PVRVQGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGT-GDT 217
G + P RV GLE K + V G+ H+ +L + G ++ WG+N++GQL
Sbjct: 191 GQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAF 250
Query: 218 QPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLG------------ 265
P Q I + I +G H A T+ G+++ WGR ++G+LG
Sbjct: 251 LPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLE 310
Query: 266 ----FGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYG 321
F + +P + L G +VSCG H++A+ G +S+G +HG G G
Sbjct: 311 KQDSFLPCSRPPNSMPSSPHCLTG--ATEVSCGSEHNLAII-GGVCYSWGWNEHGMCGDG 367
Query: 322 RKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
+ N+ AP+ + + LV CG H+LA+ +
Sbjct: 368 TEA----------NVWAPKPVQALLSSSGL--LVGCGAGHSLALCQ 401
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 107/286 (37%), Gaps = 53/286 (18%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTK------ 60
+++ GS GQLG+ + R V L KV + AG R+++A G
Sbjct: 122 VLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTGL 181
Query: 61 -----------------TENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 103
T PS+V L N+K + G H ++ D G Y WG N++
Sbjct: 182 ASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKH 241
Query: 104 GQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ--- 160
GQ E L I C V + +G TH V T G ++TWG+
Sbjct: 242 GQLANE-------AAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADY 294
Query: 161 -------------------PWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGAL 201
+ P S+P L ++ G+ HNLA+ G
Sbjct: 295 GQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGATEVSCGSEHNLAII-GGVC 353
Query: 202 WAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTAL 247
++WG NE+G G G P PVQ L + + + G HS AL
Sbjct: 354 YSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCGAGHSLAL 399
>sp|Q3MHW0|SRGEF_BOVIN Secretion-regulating guanine nucleotide exchange factor OS=Bos
taurus GN=SERGEF PE=2 SV=1
Length = 464
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 160/385 (41%), Gaps = 69/385 (17%)
Query: 3 STTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKTE 62
+ ++ AWG+ GQLG+G+ E+ V ++ C G K
Sbjct: 13 TAAALFAWGANSYGQLGLGHKED------------------VLSAQQLSDFCKSGCIK-- 52
Query: 63 NIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRR 122
+ GG H V D+G + G N+ GQ G G
Sbjct: 53 ---------------RITGGGGHSAVVTDEGSLFVCGLNKDGQLG--------LGHTEEV 89
Query: 123 DIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWT-----WGQPWPPGDIKQISVPVRVQ 177
P + ++QVA G +++LT G V + +GQ P ++ +P ++
Sbjct: 90 LYFTPCKSLLGCAIQQVACGWDFTIILTENGQVLSCGSNSFGQLGVPHGPRRCVIPQAIE 149
Query: 178 GL-EQVKLIAVGAFHNLALQEDGALWAWGNNEYG---QLGTGDTQP----RSQPIPVQGL 229
L E+V IA G H LA G ++ WG +L G T P +P V GL
Sbjct: 150 LLREKVVSIAAGLRHALAATASGTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGL 209
Query: 230 SGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVN--LLAGED 287
V + AG HS +LTD GE+Y WG +HG+L + + ++PQ++ E
Sbjct: 210 ENSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQLA---SQAAFLLLPQRIEARCFQNEK 266
Query: 288 IVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAG---- 343
I V G TH VA T G +F++GR D+G+L GR V T + E P+ +G
Sbjct: 267 IAAVWSGWTHLVAQTVTGKVFTWGRADYGQL--GRTVETREGWESEKQDPSLPGSGPQKG 324
Query: 344 --DGVDRRWIAKLVACGGRHTLAIV 366
+ A ++CG H LA++
Sbjct: 325 TPSCLPCLTGATEISCGSEHNLAVI 349
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 112/289 (38%), Gaps = 59/289 (20%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVV-KALEPY--KVRSVVAGSRNSLAICDDGKT---- 59
+++ GS GQLG+ + R CV+ +A+E KV S+ AG R++LA G
Sbjct: 122 VLSCGSNSFGQLGVPHGPRR---CVIPQAIELLREKVVSIAAGLRHALAATASGTVFQWG 178
Query: 60 -------------------KTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGG 100
T PS V L N++ V G H ++ D G Y WG
Sbjct: 179 TGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGS 238
Query: 101 NEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ 160
N++GQ + L I RC + V +G TH V T G V+TWG+
Sbjct: 239 NKHGQLASQ-------AAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTWGR 291
Query: 161 ----------------------PWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQED 198
P PG Q P + L I+ G+ HNLA+
Sbjct: 292 ADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTGATEISCGSEHNLAVI-G 350
Query: 199 GALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTAL 247
G +WG NE+G G G P PV GL + + G HS AL
Sbjct: 351 GVCHSWGWNEHGMCGDGTEADVWAPKPVPGLRFFLGLHVGCGAGHSLAL 399
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 194 ALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGL----TLVDIAAGGWHSTALTD 249
A+ AL+AWG N YGQLG G + + Q LS + I GG HS +TD
Sbjct: 10 AVPTAAALFAWGANSYGQLGLGH---KEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTD 66
Query: 250 DGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFS 309
+G ++ G + G+LG G ++ P K L G I QV+CG ++ LT +G + S
Sbjct: 67 EGSLFVCGLNKDGQLGLGHTEEVLYFTPCKS--LLGCAIQQVACGWDFTIILTENGQVLS 124
Query: 310 FGRGDHGRLG 319
G G+LG
Sbjct: 125 CGSNSFGQLG 134
Score = 39.3 bits (90), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 13/124 (10%)
Query: 244 STALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTR 303
S A+ ++ WG +G+LG G + Q + I +++ GG HS +T
Sbjct: 8 SEAVPTAAALFAWGANSYGQLGLGHKEDVLS-AQQLSDFCKSGCIKRITGGGGHSAVVTD 66
Query: 304 DGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTL 363
+G +F G G+LG G EV P G + + VACG T+
Sbjct: 67 EGSLFVCGLNKDGQLGLGHT------EEVLYFTPCKSLLGCAIQQ------VACGWDFTI 114
Query: 364 AIVE 367
+ E
Sbjct: 115 ILTE 118
>sp|Q6NYE2|RCC2_DANRE Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1
Length = 495
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 107/200 (53%), Gaps = 18/200 (9%)
Query: 181 QVKLIAVG--AFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIA 238
QV + G A H+L + +G LW+WG N+ GQLG GDT+ P ++GL +V A
Sbjct: 122 QVSCVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAA 181
Query: 239 AGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHS 298
G H+ ALT++G VY +G + G+LG G N + + P + G+ IV+V+CG S
Sbjct: 182 CGRNHTLALTENGTVYTFGENKLGQLGQG-NQTDAVLSPATIQ-YNGQPIVKVACGAEFS 239
Query: 299 VALTRDGHIFSFGRGDHGRLGY---GRKVTTGQPMEVPINIPAPRNAGDGVDR------- 348
+ + G+++SFG ++G+LG+ G+ + Q +E + PR +++
Sbjct: 240 MIVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCEL-IPRRVAIFIEKTKDGQVL 298
Query: 349 ---RWIAKLVACGGRHTLAI 365
+A+ VACG HTL +
Sbjct: 299 PVPNVVARDVACGANHTLVL 318
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 130/266 (48%), Gaps = 35/266 (13%)
Query: 92 QGRAYAWGGNEYGQCG-EEPERKDDTGRILRRDIVIPQR--CAPKLIVRQVAAG--GTHS 146
+G+ +G + G +E ++ R L +++ P R C + V V +G HS
Sbjct: 76 KGQLLIFGATNWDLIGRKEVPKQQAAFRNLGQNLWGPHRYGCLSDVQVSCVVSGPCAAHS 135
Query: 147 VVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGL--EQVKLIAVGAFHNLALQEDGA 200
+++T EG +W+WG+ GD K++ P ++GL E + A G H LAL E+G
Sbjct: 136 LIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTENGT 195
Query: 201 LWAWGNNEYGQLGTGD-TQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRG 259
++ +G N+ GQLG G+ T P +Q +G +V +A G S + G +Y +G
Sbjct: 196 VYTFGENKLGQLGQGNQTDAVLSPATIQ-YNGQPIVKVACGAEFSMIVDCKGNLYSFGCP 254
Query: 260 EHGRLGFGDNDK----------SSKMVPQKV----------NLLAGEDIV--QVSCGGTH 297
E+G+LG + K +++P++V +L ++V V+CG H
Sbjct: 255 EYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVACGANH 314
Query: 298 SVALTRDGHIFSFGRGDHGRLGYGRK 323
++ L +FS+G G +GRLG+ +
Sbjct: 315 TLVLDSQKRVFSWGFGGYGRLGHAEQ 340
Score = 91.7 bits (226), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 137/341 (40%), Gaps = 58/341 (17%)
Query: 9 AWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKT--ENIPS 66
+WG + GQLG G+ + E +++ L + + G ++LA+ ++G T EN
Sbjct: 146 SWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTENGTVYTFGENKLG 205
Query: 67 QVNALSNTK--------------IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPER 112
Q+ + T IV+ A G + VD +G Y++G EYGQ G +
Sbjct: 206 QLGQGNQTDAVLSPATIQYNGQPIVKVACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDG 265
Query: 113 K--DDTGRILRRDIVIPQRCA--------------PKLIVRQVAAGGTHSVVLTREGHVW 156
K RI +IP+R A P ++ R VA G H++VL + V+
Sbjct: 266 KFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVACGANHTLVLDSQKRVF 325
Query: 157 TWG-------------QPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWA 203
+WG P +K P R G Q I G + AL E G L+
Sbjct: 326 SWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGR--GATQ---IYCGYQCSFALSEMGGLFF 380
Query: 204 WGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRG-EHG 262
WG + T P VQ L G + +A G DD + WG G
Sbjct: 381 WGVTNTSREST------MYPKAVQDLCGWKIRSLACGKSSIIVAADDSTI-SWGPSPTFG 433
Query: 263 RLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTR 303
LG+GDN S Q+V L G QV G +HS+ + R
Sbjct: 434 ELGYGDNKPKSSTTAQEVKTLDGVYSEQVVMGYSHSLVIAR 474
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 125/295 (42%), Gaps = 60/295 (20%)
Query: 65 PSQVNALSNTKIVQAAIG--GWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRR 122
P + LS+ ++ G H L + +G+ ++WG N+ GQ G DT R+
Sbjct: 112 PHRYGCLSDVQVSCVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGH-----GDTKRLE-- 164
Query: 123 DIVIPQRCAPKLI-------VRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQ------ 169
APKLI + A G H++ LT G V+T+G+ G + Q
Sbjct: 165 --------APKLIEGLGEEVIVAAACGRNHTLALTENGTVYTFGEN-KLGQLGQGNQTDA 215
Query: 170 ISVPVRVQGLEQ-VKLIAVGAFHNLALQEDGALWAWGNNEYGQLG---TGDTQPRSQPIP 225
+ P +Q Q + +A GA ++ + G L+++G EYGQLG G R+Q I
Sbjct: 216 VLSPATIQYNGQPIVKVACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIE 275
Query: 226 ---------------------VQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRL 264
V + + D+A G H+ L V+ WG G +GRL
Sbjct: 276 FDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGFGGYGRL 335
Query: 265 GFGDNDKSSKMVPQKVNL--LAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGR 317
G ++ +MVP+ V L G Q+ CG S AL+ G +F +G + R
Sbjct: 336 GHA--EQKDEMVPRLVKLFDFPGRGATQIYCGYQCSFALSEMGGLFFWGVTNTSR 388
>sp|Q9P258|RCC2_HUMAN Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2
Length = 522
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 102/191 (53%), Gaps = 18/191 (9%)
Query: 189 AFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALT 248
A H+L + +G LW+WG NE GQLG GDT+ P ++GLS +V A G H+ ALT
Sbjct: 159 AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALT 218
Query: 249 DDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLA-GEDIVQVSCGGTHSVALTRDGHI 307
+ G V+ +G + G+LG G+ + VP ++ G+ I +++CG S+ + G++
Sbjct: 219 ETGSVFAFGENKMGQLGLGNQ---TDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNL 275
Query: 308 FSFGRGDHGRLGY---GRKVTTGQPMEVPINIPAPRNAGDGVDR----------RWIAKL 354
+SFG ++G+LG+ G+ + Q +E + PR +++ + +
Sbjct: 276 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCEL-VPRRVAIFIEKTKDGQILPVPNVVVRD 334
Query: 355 VACGGRHTLAI 365
VACG HTL +
Sbjct: 335 VACGANHTLVL 345
Score = 99.0 bits (245), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 124/249 (49%), Gaps = 34/249 (13%)
Query: 108 EEPERKDDTGRILRRDIVIPQR--CAPKLIVRQVAAG--GTHSVVLTREGHVWTWGQ--- 160
+E ++ R L +++ P R C + VR V +G HS+++T EG +W+WG+
Sbjct: 120 KEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEK 179
Query: 161 -PWPPGDIKQISVPVRVQGLEQVKLI--AVGAFHNLALQEDGALWAWGNNEYGQLGTGDT 217
GD K++ P ++GL ++ A G H LAL E G+++A+G N+ GQLG G+
Sbjct: 180 GQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGN- 238
Query: 218 QPRSQPIPVQGL-SGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDK----- 271
Q + P P Q + +G + +A G S + G +Y +G E+G+LG + K
Sbjct: 239 QTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARA 298
Query: 272 -----SSKMVPQKVNLLAGED------------IVQVSCGGTHSVALTRDGHIFSFGRGD 314
++VP++V + + + V+CG H++ L +FS+G G
Sbjct: 299 QRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGG 358
Query: 315 HGRLGYGRK 323
+GRLG+ +
Sbjct: 359 YGRLGHAEQ 367
Score = 95.9 bits (237), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 140/342 (40%), Gaps = 58/342 (16%)
Query: 9 AWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK---------- 58
+WG E GQLG G+ + E +++ L + S G ++LA+ + G
Sbjct: 173 SWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMG 232
Query: 59 -----TKTENIPSQVNALSNTK-IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPER 112
+T+ +PS + N + I + A G + +D +G Y++G EYGQ G +
Sbjct: 233 QLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDG 292
Query: 113 K--DDTGRILRRDIVIPQRCA--------------PKLIVRQVAAGGTHSVVLTREGHVW 156
K RI ++P+R A P ++VR VA G H++VL + V+
Sbjct: 293 KFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVF 352
Query: 157 TWG-------------QPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWA 203
+WG P +K P R G Q I G + A+ E G L+
Sbjct: 353 SWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGR--GASQ---IYAGYTCSFAVSEVGGLFF 407
Query: 204 WGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRG-EHG 262
WG + T P VQ L G + +A G S + D WG G
Sbjct: 408 WGATNTSREST------MYPKAVQDLCGWRIRSLACGK-SSIIVAADESTISWGPSPTFG 460
Query: 263 RLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRD 304
LG+GD+ S Q+V L G QV+ G +HS+ + RD
Sbjct: 461 ELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARD 502
Score = 75.1 bits (183), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 163/397 (41%), Gaps = 98/397 (24%)
Query: 39 KVRSVVAGS--RNSLAICDDGK----------------TKTENIPSQVNALSNTKIVQAA 80
+VR+VV+GS +SL I +GK TK P + LS+ IV AA
Sbjct: 149 RVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAA 208
Query: 81 IGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLI----- 135
G H LA+ + G +A+G N+ GQ G + + +P +P I
Sbjct: 209 CGRNHTLALTETGSVFAFGENKMGQLG-----------LGNQTDAVP---SPAQIMYNGQ 254
Query: 136 -VRQVAAGGTHSVVLTREGHVWTWGQPW-----PPGDIKQIS-----------VPVRVQG 178
+ ++A G S+++ +G+++++G P D K I+ VP RV
Sbjct: 255 PITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAI 314
Query: 179 LEQ--------------VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQP- 223
+ V+ +A GA H L L +++WG YG+LG + + P
Sbjct: 315 FIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR 374
Query: 224 -IPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNL 282
+ + G I AG S A+++ G ++ WG + + S M P+ V
Sbjct: 375 LVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWGA--------TNTSRESTMYPKAVQD 426
Query: 283 LAGEDIVQVSCGGTHSVALTRDGHIFSFGRG-DHGRLGYG----RKVTTGQPMEVPINIP 337
L G I ++CG + S+ + D S+G G LGYG + T Q ++
Sbjct: 427 LCGWRIRSLACGKS-SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTL---- 481
Query: 338 APRNAGDGVDRRWIAKLVACGGRHTLAIVEWQTEESK 374
DG+ ++ VA G H+L I ++E K
Sbjct: 482 ------DGI----FSEQVAMGYSHSLVIARDESETEK 508
>sp|Q8BK67|RCC2_MOUSE Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1
Length = 520
Score = 101 bits (251), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 101/191 (52%), Gaps = 18/191 (9%)
Query: 189 AFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALT 248
A H+L + +G LW+WG NE GQLG GDT+ P ++ LS +V A G H+ ALT
Sbjct: 157 AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALT 216
Query: 249 DDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLA-GEDIVQVSCGGTHSVALTRDGHI 307
D G V+ +G + G+LG G+ + VP ++ G+ I +++CG S+ + G++
Sbjct: 217 DTGSVFAFGENKMGQLGLGNQ---TDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGNL 273
Query: 308 FSFGRGDHGRLGY---GRKVTTGQPMEVPINIPAPRNAGDGVDR----------RWIAKL 354
+SFG ++G+LG+ G+ + Q +E + PR +++ + +
Sbjct: 274 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCEL-VPRRVAIFIEKTKDGQILPVPNVVVRD 332
Query: 355 VACGGRHTLAI 365
VACG HTL +
Sbjct: 333 VACGANHTLVL 343
Score = 98.2 bits (243), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 120/239 (50%), Gaps = 34/239 (14%)
Query: 118 RILRRDIVIPQR--CAPKLIVRQVAAG--GTHSVVLTREGHVWTWGQ----PWPPGDIKQ 169
R L +++ P R C + VR V +G HS+++T EG +W+WG+ GD K+
Sbjct: 128 RNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKR 187
Query: 170 ISVPVRVQGL--EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQ 227
+ P ++ L E + L A G H LAL + G+++A+G N+ GQLG G+ Q + P P Q
Sbjct: 188 VEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGN-QTDAVPSPAQ 246
Query: 228 GL-SGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDK----------SSKMV 276
+ +G + +A G S + G +Y +G E+G+LG + K ++V
Sbjct: 247 IMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELV 306
Query: 277 PQKVNLLAGED------------IVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRK 323
P++V + + + V+CG H++ L +FS+G G +GRLG+ +
Sbjct: 307 PRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQ 365
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 140/342 (40%), Gaps = 58/342 (16%)
Query: 9 AWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK---------- 58
+WG E GQLG G+ + E +++AL + G ++LA+ D G
Sbjct: 171 SWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMG 230
Query: 59 -----TKTENIPSQVNALSNTK-IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPER 112
+T+ +PS + N + I + A G + +D +G Y++G EYGQ G +
Sbjct: 231 QLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDG 290
Query: 113 K--DDTGRILRRDIVIPQRCA--------------PKLIVRQVAAGGTHSVVLTREGHVW 156
K RI ++P+R A P ++VR VA G H++VL + V+
Sbjct: 291 KFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVF 350
Query: 157 TWG-------------QPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWA 203
+WG P +K P R G Q I G + A+ E G L+
Sbjct: 351 SWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGR--GATQ---IYAGYTCSFAVSEVGGLFF 405
Query: 204 WGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRG-EHG 262
WG + T P VQ L G + +A G S + D WG G
Sbjct: 406 WGATNTSREST------MYPKAVQDLCGWRIRSLACGK-SSIIVAADESTISWGPSPTFG 458
Query: 263 RLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRD 304
LG+GD+ S Q+V L G QV+ G +HS+ + RD
Sbjct: 459 ELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARD 500
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 164/397 (41%), Gaps = 98/397 (24%)
Query: 39 KVRSVVAGS--RNSLAICDDGK----------------TKTENIPSQVNALSNTKIVQAA 80
+VR+VV+GS +SL I +GK TK P + ALS+ IV AA
Sbjct: 147 RVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAA 206
Query: 81 IGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLI----- 135
G H LA+ D G +A+G N+ GQ G + + +P +P I
Sbjct: 207 CGRNHTLALTDTGSVFAFGENKMGQLG-----------LGNQTDAVP---SPAQIMYNGQ 252
Query: 136 -VRQVAAGGTHSVVLTREGHVWTWGQPW-----PPGDIKQIS-----------VPVRVQG 178
+ ++A G S+++ +G+++++G P D K I+ VP RV
Sbjct: 253 PITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAI 312
Query: 179 LEQ--------------VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQP- 223
+ V+ +A GA H L L +++WG YG+LG + + P
Sbjct: 313 FIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR 372
Query: 224 -IPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNL 282
+ + G I AG S A+++ G ++ WG + + S M P+ V
Sbjct: 373 LVKLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWGA--------TNTSRESTMYPKAVQD 424
Query: 283 LAGEDIVQVSCGGTHSVALTRDGHIFSFGRG-DHGRLGYG----RKVTTGQPMEVPINIP 337
L G I ++CG + S+ + D S+G G LGYG + T Q ++
Sbjct: 425 LCGWRIRSLACGKS-SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTL---- 479
Query: 338 APRNAGDGVDRRWIAKLVACGGRHTLAIVEWQTEESK 374
DG+ ++ VA G H+L I ++E K
Sbjct: 480 ------DGI----FSEQVAMGYSHSLVIARDESEAEK 506
>sp|P23800|RCC1_MESAU Regulator of chromosome condensation OS=Mesocricetus auratus
GN=RCC1 PE=1 SV=1
Length = 421
Score = 98.6 bits (244), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 185/411 (45%), Gaps = 81/411 (19%)
Query: 7 IIAWGSGEDGQLGIGNNE-EREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKT---- 61
++ G G+ GQLG+G + ER+ +V L+ V AG +++ + G+ +
Sbjct: 37 VLTLGQGDVGQLGLGESVLERKKPALVPLLQ--DVVQAEAGGMHTVCLNQSGQVYSFGCN 94
Query: 62 --------------ENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGG--NEYGQ 105
E +P +V K+VQ + G H A+ + GR + WG + G
Sbjct: 95 DEGALGRDTSVEGSEMVPGKVEL--QEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGV 152
Query: 106 CGE-EPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPP 164
G EP +K ++P + + V +VA+G H V+LT +G ++T G
Sbjct: 153 IGLLEPMKKS----------MVPVQVQLDMPVVKVASGNDHLVMLTTDGDLYTLG----C 198
Query: 165 GDIKQI-SVPVRV------QGLEQV---KLIAV----------------GAFHNLALQED 198
G+ Q+ VP QGLE++ K + + GA+ A+ +
Sbjct: 199 GEQGQLGRVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAISRE 258
Query: 199 GALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTL--VDIAAGGWHSTALTDDGEVYGW 256
G ++ +G + Y QLGT T P + T V + G H+ + +G+ Y
Sbjct: 259 GHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGKAYSL 318
Query: 257 GRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHG 316
GR E+GRLG G+ + K +P ++ L + V+CG + A+++DG +F++G G +
Sbjct: 319 GRAEYGRLGLGEGAEE-KSIPTLISRLP--VVSSVACGASVGYAVSKDGRVFAWGMGTNY 375
Query: 317 RLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
+LG G+ P+E+ G ++ R + V+ GG+HT+ +V+
Sbjct: 376 QLGTGQDEDAWSPVEM---------TGKQLENRVVLT-VSSGGQHTVLLVK 416
Score = 84.7 bits (208), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 112/237 (47%), Gaps = 30/237 (12%)
Query: 144 THSVVLTREGHVWTWGQPWPPGDIKQISV---------PVRVQGLEQVKLIAVGAFHNLA 194
+H T G V T GQ GD+ Q+ + P V L+ V G H +
Sbjct: 26 SHRSHKTEPGLVLTLGQ----GDVGQLGLGESVLERKKPALVPLLQDVVQAEAGGMHTVC 81
Query: 195 LQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVY 254
L + G ++++G N+ G LG + S+ +P + +V ++AG H+ ALT+DG V+
Sbjct: 82 LNQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVF 141
Query: 255 GWG--RGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGR 312
WG R +G +G + K S MVP +V L +V+V+ G H V LT DG +++ G
Sbjct: 142 LWGSFRDNNGVIGLLEPMKKS-MVPVQVQL--DMPVVKVASGNDHLVMLTTDGDLYTLGC 198
Query: 313 GDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVEWQ 369
G+ G+LG VP + A R G++R + K V R + V +Q
Sbjct: 199 GEQGQLG-----------RVP-ELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQ 243
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 139/335 (41%), Gaps = 42/335 (12%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKT------- 59
+ ++G ++G LG + E + K KV V AG ++ A+ +DG+
Sbjct: 88 VYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFR 147
Query: 60 ------------KTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 107
K +P QV + +V+ A G H + + G Y G E GQ G
Sbjct: 148 DNNGVIGLLEPMKKSMVPVQVQL--DMPVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLG 205
Query: 108 EEPERKDDTG------RILRRDIVIPQRCAPKLIVR--QVAAGGTHSVVLTREGHVWTWG 159
PE + G R+L V+ + + VR G + ++REGHV+ +G
Sbjct: 206 RVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAISREGHVYGFG 265
Query: 160 -----QPWPPGDIKQISVPVRVQGLEQVKL----IAVGAFHNLALQEDGALWAWGNNEYG 210
Q PG +P + + + G H + + +G ++ G EYG
Sbjct: 266 LSNYHQLGTPG-TASCFIPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGKAYSLGRAEYG 324
Query: 211 QLGTGD-TQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDN 269
+LG G+ + +S P + L + +A G A++ DG V+ WG G + +LG G +
Sbjct: 325 RLGLGEGAEEKSIPTLISRLP--VVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQD 382
Query: 270 DKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRD 304
+ + V L ++ VS GG H+V L +D
Sbjct: 383 EDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKD 417
>sp|Q52KW8|RCC2_XENLA Protein RCC2 homolog OS=Xenopus laevis GN=rcc2 PE=2 SV=1
Length = 513
Score = 98.6 bits (244), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 18/200 (9%)
Query: 181 QVKLIAVG--AFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIA 238
QV+ +A G A H+L + +G LW+WG N+ GQLG GD + P ++ L G V A
Sbjct: 140 QVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVFVHAA 199
Query: 239 AGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLA-GEDIVQVSCGGTH 297
G H+ ALT++G VY +G + G+LG G+ + VP +L G+ I +V+CG
Sbjct: 200 CGRNHTLALTENGSVYAFGENKMGQLGLGNK---TDAVPSPAQILYNGQPITKVACGAEF 256
Query: 298 SVALTRDGHIFSFGRGDHGRLGY---GRKVTTGQPMEVPINIPAPRNA------GDGVDR 348
S+ + G+++SFG ++G+LG+ G+ + Q +E + A R A DG
Sbjct: 257 SMIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQIL 316
Query: 349 ---RWIAKLVACGGRHTLAI 365
+ + +ACG H+L +
Sbjct: 317 PVPNVVVRDIACGINHSLIL 336
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 122/239 (51%), Gaps = 34/239 (14%)
Query: 118 RILRRDIVIPQR--CAPKLIVRQVAAG--GTHSVVLTREGHVWTWGQ----PWPPGDIKQ 169
R L +++ P R C + VR VA+G HS+++T EG +W+WG+ GDIK+
Sbjct: 121 RNLGQNLWGPHRYGCLTGVQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGDIKR 180
Query: 170 ISVPVRVQGLEQVKLI--AVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQ 227
I VP ++ L+ + A G H LAL E+G+++A+G N+ GQLG G+ + + P P Q
Sbjct: 181 IDVPKLIESLKGEVFVHAACGRNHTLALTENGSVYAFGENKMGQLGLGN-KTDAVPSPAQ 239
Query: 228 GL-SGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDK----------SSKMV 276
L +G + +A G S + G +Y +G E+G+LG + K +++
Sbjct: 240 ILYNGQPITKVACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELI 299
Query: 277 PQKVNLLAGED------------IVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRK 323
+++ + + + ++CG HS+ L +FS+G G +GRLG+ +
Sbjct: 300 ARRIAIFIEKTKDGQILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQ 358
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 140/342 (40%), Gaps = 58/342 (16%)
Query: 9 AWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK---------- 58
+WG + GQLG G+ + + ++++L+ G ++LA+ ++G
Sbjct: 164 SWGRNDKGQLGHGDIKRIDVPKLIESLKGEVFVHAACGRNHTLALTENGSVYAFGENKMG 223
Query: 59 -----TKTENIPSQVNALSNTK-IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPER 112
KT+ +PS L N + I + A G + +D +G Y++G EYGQ G +
Sbjct: 224 QLGLGNKTDAVPSPAQILYNGQPITKVACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDG 283
Query: 113 KD---------DTGRILRRDIVIPQRC-------APKLIVRQVAAGGTHSVVLTREGHVW 156
K D I RR + ++ P ++VR +A G HS++L + V+
Sbjct: 284 KYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDIACGINHSLILDSQKRVF 343
Query: 157 TWG-------------QPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWA 203
+WG P +K P R G Q I GA + A+ E G L+
Sbjct: 344 SWGFGGYGRLGHSEQRDEMVPRLVKLFDFPGR--GAAQ---IYAGATCSFAVSEMGGLFF 398
Query: 204 WGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRG-EHG 262
WG + T P VQ L G + +A G S + D WG G
Sbjct: 399 WGATNTSRDST------MYPKAVQDLCGWKVRSLACGK-SSIIVAADESTISWGPSPTFG 451
Query: 263 RLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRD 304
LG+GDN S Q+V L G QV G +H++ + RD
Sbjct: 452 ELGYGDNKAKSSTTAQEVKTLDGIYSDQVIMGNSHTLVVARD 493
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 161/397 (40%), Gaps = 98/397 (24%)
Query: 39 KVRSVVAGS--RNSLAICDDGK----------------TKTENIPSQVNALSNTKIVQAA 80
+VRSV +GS +SL I +GK K ++P + +L V AA
Sbjct: 140 QVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVFVHAA 199
Query: 81 IGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLI----- 135
G H LA+ + G YA+G N+ GQ G + + +P +P I
Sbjct: 200 CGRNHTLALTENGSVYAFGENKMGQLG-----------LGNKTDAVP---SPAQILYNGQ 245
Query: 136 -VRQVAAGGTHSVVLTREGHVWTWGQPW-----PPGDIKQISVPVRVQ------------ 177
+ +VA G S+++ +G+++++G P D K I+ R++
Sbjct: 246 PITKVACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAI 305
Query: 178 GLEQ-------------VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQP- 223
+E+ V+ IA G H+L L +++WG YG+LG + + P
Sbjct: 306 FIEKTKDGQILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPR 365
Query: 224 -IPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNL 282
+ + G I AG S A+++ G ++ WG R S M P+ V
Sbjct: 366 LVKLFDFPGRGAAQIYAGATCSFAVSEMGGLFFWGATNTSR--------DSTMYPKAVQD 417
Query: 283 LAGEDIVQVSCGGTHSVALTRDGHIFSFGRG-DHGRLGYG----RKVTTGQPMEVPINIP 337
L G + ++CG + S+ + D S+G G LGYG + TT Q ++
Sbjct: 418 LCGWKVRSLACGKS-SIIVAADESTISWGPSPTFGELGYGDNKAKSSTTAQEVKTL---- 472
Query: 338 APRNAGDGVDRRWIAKLVACGGRHTLAIVEWQTEESK 374
DG+ + V G HTL + +TE+ K
Sbjct: 473 ------DGI----YSDQVIMGNSHTLVVARDETEQDK 499
>sp|P28745|RCC1_SCHPO Protein pim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pim1 PE=1 SV=2
Length = 539
Score = 98.2 bits (243), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 123/261 (47%), Gaps = 18/261 (6%)
Query: 76 IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE-EPERKDDTGRILRRDIV--IPQRCA- 131
+V A+GG H A+ GR Y WG N+ G ++KD+ G + D++ P +
Sbjct: 110 VVDLAVGGMHSAALSHDGRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEG 169
Query: 132 --PKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI-------KQISVPVRVQGLEQV 182
L V +V + +T G +TWG + K+ + P +++ L ++
Sbjct: 170 ALSHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYSDSQKRTAEPTQMR-LPEI 228
Query: 183 KLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS-QPIPVQGLSGLTLVDIAAGG 241
+A G H +AL G ++ WGN + QLG + R Q + Q L+ ++ + AG
Sbjct: 229 CQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPLALKNIISVGAGS 288
Query: 242 WHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMV---PQKVNLLAGEDIVQVSCGGTHS 298
+HS A+ + G VY WG + G D+ V P V+ L G ++ ++ G H+
Sbjct: 289 YHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHT 348
Query: 299 VALTRDGHIFSFGRGDHGRLG 319
+AL DG + ++GR D +LG
Sbjct: 349 LALLEDGRVLAWGRDDRHQLG 369
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 157/376 (41%), Gaps = 72/376 (19%)
Query: 6 SIIAWGSGEDGQLGIGNNEE----REWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKT 61
++ +GSG +LG+G E R + + + + V + G +S A+ DG+ T
Sbjct: 72 NVYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYT 131
Query: 62 -----------------------------ENIPSQVN-ALSNTKIVQAAIGGWHCLAVDD 91
E PS+V ALS+ ++ + A+ D
Sbjct: 132 WGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAITD 191
Query: 92 QGRAYAWGGNEY--GQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVL 149
G + WG G G +K R +P+ C Q+A G H + L
Sbjct: 192 NGCCFTWGTFRCSDGVLGYSDSQKRTAEPTQMR---LPEIC-------QLATGTDHIIAL 241
Query: 150 TREGHVWTWG--QPWPPGDIKQISVPVRVQGL-------EQVKLIAVGAFHNLALQEDGA 200
T G V+TWG Q + G +++ R+QGL + + + G++H+ A+ G
Sbjct: 242 TTTGKVYTWGNGQQFQLG--RRMLERRRLQGLTPQPLALKNIISVGAGSYHSFAIDNKGR 299
Query: 201 LWAWGNNEYGQLGTGDTQPR-----SQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYG 255
++AWG N Q G ++P V L G + I G H+ AL +DG V
Sbjct: 300 VYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLEDGRVLA 359
Query: 256 WGRGEHGRLGFGDN---------DKSSKMVPQKVNLLAG-EDIVQVSCGGTHSVALTRDG 305
WGR + +LG DN +K + ++ G +++QV CG H++A+T DG
Sbjct: 360 WGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGLTNVIQVVCGTHHNLAVTSDG 419
Query: 306 HIFSFGRGDHGRLGYG 321
++S+G ++ +G G
Sbjct: 420 KVYSWGSAENYEVGQG 435
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 104/227 (45%), Gaps = 44/227 (19%)
Query: 75 KIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRIL-RRDI--VIPQRCA 131
+I Q A G H +A+ G+ Y WG + Q G R+L RR + + PQ A
Sbjct: 227 EICQLATGTDHIIALTTTGKVYTWGNGQQFQLGR---------RMLERRRLQGLTPQPLA 277
Query: 132 PKLIVRQVAAGGTHSVVLTREGHVWTWG-----------QPWPPGDIKQISVPVRVQGLE 180
K I+ V AG HS + +G V+ WG + G + I+ P V LE
Sbjct: 278 LKNII-SVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAV--ITKPTLVDALE 334
Query: 181 --QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLG--------------TGDTQPRSQPI 224
VK I G H LAL EDG + AWG ++ QLG G+ S P
Sbjct: 335 GYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPT 394
Query: 225 PVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDK 271
+ GL+ + + + G H+ A+T DG+VY WG E+ +G GDND+
Sbjct: 395 IIPGLTNV--IQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDE 439
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 107/253 (42%), Gaps = 56/253 (22%)
Query: 8 IAWGSG--EDGQLGIGNNEEREWVCVVKALEPYKVR-----SVVAGSRNSLAICDDGKTK 60
WG+ DG LG ++++R EP ++R + G+ + +A+ GK
Sbjct: 196 FTWGTFRCSDGVLGYSDSQKR-------TAEPTQMRLPEICQLATGTDHIIALTTTGKVY 248
Query: 61 T-------------------ENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGN 101
T + + Q AL N I+ G +H A+D++GR YAWG N
Sbjct: 249 TWGNGQQFQLGRRMLERRRLQGLTPQPLALKN--IISVGAGSYHSFAIDNKGRVYAWGLN 306
Query: 102 EYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ- 160
QCG E E +++ I + +V V+ + G H++ L +G V WG+
Sbjct: 307 ITRQCGIEVEDEEEGAVITKPTLV---DALEGYNVKSITGGEHHTLALLEDGRVLAWGRD 363
Query: 161 ----------PWPPGDIKQ-------ISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWA 203
P +K +S P + GL V + G HNLA+ DG +++
Sbjct: 364 DRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGLTNVIQVVCGTHHNLAVTSDGKVYS 423
Query: 204 WGNNEYGQLGTGD 216
WG+ E ++G GD
Sbjct: 424 WGSAENYEVGQGD 436
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 40/296 (13%)
Query: 96 YAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHV 155
Y +G + G E D ++ R + P K+ V +A GG HS L+ +G V
Sbjct: 74 YVFGSGSMNELGMGEEEMD----VVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRV 129
Query: 156 WTWG-------------QPWPPGDIKQISV----PVRVQG-LEQVKLIAVGAFHNL--AL 195
+TWG Q GD + P +V+G L +++ V NL A+
Sbjct: 130 YTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAI 189
Query: 196 QEDGALWAWGNNEY--GQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEV 253
++G + WG G LG D+Q R+ P Q + + +A G H ALT G+V
Sbjct: 190 TDNGCCFTWGTFRCSDGVLGYSDSQKRTAE-PTQ-MRLPEICQLATGTDHIIALTTTGKV 247
Query: 254 YGWGRGEHGRLG--FGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFG 311
Y WG G+ +LG + + + PQ LA ++I+ V G HS A+ G ++++G
Sbjct: 248 YTWGNGQQFQLGRRMLERRRLQGLTPQP---LALKNIISVGAGSYHSFAIDNKGRVYAWG 304
Query: 312 RGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
+ G +V + V I P +A +G + K + G HTLA++E
Sbjct: 305 LNITRQCGI--EVEDEEEGAV-ITKPTLVDALEG----YNVKSITGGEHHTLALLE 353
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 92/216 (42%), Gaps = 28/216 (12%)
Query: 138 QVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQE 197
+V+ G L + +P + + PVRV G + ++ + L
Sbjct: 15 EVSKNGVEKRELDESDVMKNGKKPVKRAKVSSLPKPVRVPGSAK-RINKIPELPTERLN- 72
Query: 198 DGALWAWGNNEYGQLGTGDTQ------PRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDG 251
++ +G+ +LG G+ + PR PI G+ VD+A GG HS AL+ DG
Sbjct: 73 ---VYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGV--VDLAVGGMHSAALSHDG 127
Query: 252 EVYGWGRGEH---GRLGFGDNDKSSKMV--------PQKVN-LLAGEDIVQVSCGGTHSV 299
VY WG + GRL D++ V P KV L+ + +V C +
Sbjct: 128 RVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTA 187
Query: 300 ALTRDGHIFSFG--RGDHGRLGYG-RKVTTGQPMEV 332
A+T +G F++G R G LGY + T +P ++
Sbjct: 188 AITDNGCCFTWGTFRCSDGVLGYSDSQKRTAEPTQM 223
>sp|Q8VE37|RCC1_MOUSE Regulator of chromosome condensation OS=Mus musculus GN=Rcc1 PE=1
SV=1
Length = 421
Score = 98.2 bits (243), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 183/411 (44%), Gaps = 73/411 (17%)
Query: 7 IIAWGSGEDGQLGIGNNE-EREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKT---- 61
++ G G+ GQLG+G + ER+ +V L+ V AG +++ + G+ +
Sbjct: 37 VLTLGQGDVGQLGLGESVLERKKPALVPLLQ--DVVQAEAGGMHTVCLSQSGQVYSFGCN 94
Query: 62 --------------ENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGG--NEYGQ 105
E +P +V K+VQ + G H A+ + GR + WG + G
Sbjct: 95 DEGALGRDTSVEGSEMVPGKVEL--QEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGV 152
Query: 106 CGE-EPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG--QPW 162
G EP +K ++P + V +VA+G H V+LT +G ++T G +
Sbjct: 153 IGLLEPMKKS----------MVPVQVQLDAPVVKVASGNDHLVMLTNDGDLYTLGCGEQG 202
Query: 163 PPGDIKQIS-------------VPVRV-------QGLEQVKLIAVGAFHNLALQEDGALW 202
G + ++ VP V +G + + GA+ A+ +G ++
Sbjct: 203 QLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVY 262
Query: 203 AWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTL--VDIAAGGWHSTALTDDGEVYGWGRGE 260
+G + Y QLGT T P + T V + G H+ + +G+ Y GR E
Sbjct: 263 GFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAE 322
Query: 261 HGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGY 320
+GRLG G+ + K +P ++ L + V+CG + A+++DG +F++G G + +LG
Sbjct: 323 YGRLGLGEGAEE-KSIPTLISRLP--VVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGT 379
Query: 321 GRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVEWQTE 371
G+ P+E+ G ++ R + V+ GG+HT+ +V+ Q +
Sbjct: 380 GQDEDAWSPVEM---------TGKQLENRVVLT-VSSGGQHTVLLVKDQAQ 420
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 146/341 (42%), Gaps = 42/341 (12%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKT- 59
++ + + ++G ++G LG + E + K KV V AG ++ A+ +DG+
Sbjct: 82 LSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVF 141
Query: 60 ------------------KTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGN 101
K +P QV + +V+ A G H + + + G Y G
Sbjct: 142 LWGSFRDNNGVIGLLEPMKKSMVPVQVQL--DAPVVKVASGNDHLVMLTNDGDLYTLGCG 199
Query: 102 EYGQCGEEPER------KDDTGRIL-RRDIVIPQRCAPKLIVRQVAAGGTH-SVVLTREG 153
E GQ G PE + GR+L R +++ R + Q A G + + ++REG
Sbjct: 200 EQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREG 259
Query: 154 HVWTWG-----QPWPPGDIKQISVPVRVQGLEQVKL----IAVGAFHNLALQEDGALWAW 204
HV+ +G Q PG +P + + + G H + + +G ++
Sbjct: 260 HVYGFGLSNYHQLGTPG-TGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSL 318
Query: 205 GNNEYGQLGTGD-TQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGR 263
G EYG+LG G+ + +S P + L + +A G A++ DG V+ WG G + +
Sbjct: 319 GRAEYGRLGLGEGAEEKSIPTLISRLP--VVSSVACGASVGYAVSKDGRVFAWGMGTNYQ 376
Query: 264 LGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRD 304
LG G ++ + V L ++ VS GG H+V L +D
Sbjct: 377 LGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKD 417
Score = 84.7 bits (208), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 110/231 (47%), Gaps = 30/231 (12%)
Query: 150 TREGHVWTWGQPWPPGDIKQISV---------PVRVQGLEQVKLIAVGAFHNLALQEDGA 200
T G V T GQ GD+ Q+ + P V L+ V G H + L + G
Sbjct: 32 TEPGLVLTLGQ----GDVGQLGLGESVLERKKPALVPLLQDVVQAEAGGMHTVCLSQSGQ 87
Query: 201 LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWG--R 258
++++G N+ G LG + S+ +P + +V ++AG H+ ALT+DG V+ WG R
Sbjct: 88 VYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFR 147
Query: 259 GEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRL 318
+G +G + K S MVP +V L A +V+V+ G H V LT DG +++ G G+ G+L
Sbjct: 148 DNNGVIGLLEPMKKS-MVPVQVQLDA--PVVKVASGNDHLVMLTNDGDLYTLGCGEQGQL 204
Query: 319 GYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVEWQ 369
G VP + A R G+ R + + V R T V +Q
Sbjct: 205 G-----------RVP-ELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQ 243
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 243 HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALT 302
H + T+ G V G+G+ G+LG G++ K P V LL +D+VQ GG H+V L+
Sbjct: 27 HRSHNTEPGLVLTLGQGDVGQLGLGESVLERKK-PALVPLL--QDVVQAEAGGMHTVCLS 83
Query: 303 RDGHIFSFGRGDHGRLG 319
+ G ++SFG D G LG
Sbjct: 84 QSGQVYSFGCNDEGALG 100
>sp|Q90XC2|NEK8_DANRE Serine/threonine-protein kinase Nek8 OS=Danio rerio GN=nek8 PE=2
SV=1
Length = 697
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 14/206 (6%)
Query: 136 VRQVAAGGTHSVVLTREGHVWTW-------GQPWPPGDIKQISVPVRVQGLE-----QVK 183
V QV+ G T + +T+ G + TW G+P PG ++Q+ + LE +K
Sbjct: 342 VIQVSLGRTQKMGVTKSGRLITWEAPSVGSGEPTLPGAVEQMQPQFISRFLEGQSGVTIK 401
Query: 184 LIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWH 243
++ G L + G + +G+ G LG G+ +QP V+ L G LV ++ G H
Sbjct: 402 SVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQVSCGASH 461
Query: 244 STALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTR 303
A+T++ EV+ WGRG++GRLG D S PQ+V+L A + +V CG S+ ++
Sbjct: 462 VLAVTNEREVFSWGRGDNGRLGLATQD--SHNCPQQVSLPADFEAQRVLCGVDCSMIMST 519
Query: 304 DGHIFSFGRGDHGRLGYGRKVTTGQP 329
I + G +LG + T +P
Sbjct: 520 QHQILACGNNRFNKLGLDKVSGTEEP 545
Score = 94.7 bits (234), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 123/240 (51%), Gaps = 38/240 (15%)
Query: 142 GGTHSVVLTREGH------VWTWGQPWPPGDIKQISVPVRVQGLE-QVKLIAVGAFHNLA 194
GG S+ ++ H V+TWG IS P+R+ L +V +++G +
Sbjct: 303 GGLSSLTSSKMMHPLPLFSVYTWG--------SGISTPLRLPMLNTEVIQVSLGRTQKMG 354
Query: 195 LQEDGALWAWGNNEYGQLGTGD---------TQPRSQPIPVQGLSGLTLVDIAAGGWHST 245
+ + G L W E +G+G+ QP+ ++G SG+T+ ++ G +T
Sbjct: 355 VTKSGRLITW---EAPSVGSGEPTLPGAVEQMQPQFISRFLEGQSGVTIKSVSCGDLFTT 411
Query: 246 ALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDG 305
LTD G + +G G +G LG G+ + ++ P+ V L G ++VQVSCG +H +A+T +
Sbjct: 412 CLTDRGIIMTFGSGSNGCLGHGNFNDVTQ--PKIVEALLGYELVQVSCGASHVLAVTNER 469
Query: 306 HIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGD---GVDRRWIA----KLVACG 358
+FS+GRGD+GRLG + + P +V ++PA A GVD I +++ACG
Sbjct: 470 EVFSWGRGDNGRLGLATQDSHNCPQQV--SLPADFEAQRVLCGVDCSMIMSTQHQILACG 527
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 119/263 (45%), Gaps = 51/263 (19%)
Query: 138 QVAAGGTHSVVLTREGHVWTWGQPWPPGD--------------IKQISVPVRVQGLEQVK 183
QV+ G +H + +T E V++WG+ GD +Q+S+P + +
Sbjct: 454 QVSCGASHVLAVTNEREVFSWGR----GDNGRLGLATQDSHNCPQQVSLPADFEA----Q 505
Query: 184 LIAVGAFHNLALQEDGALWAWGNNEYGQLG----TGDTQPRS----------QPIPVQGL 229
+ G ++ + + A GNN + +LG +G +P S Q + L
Sbjct: 506 RVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPL 565
Query: 230 SGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIV 289
+ +V I G HS A+T+ G+ + +G +HG+LG + + S VP +V+ L G I
Sbjct: 566 NTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGC--SHRRSSRVPYQVSGLQG--IT 621
Query: 290 QVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRR 349
+CG ++A+ +G ++++G+G GRL GRK E IP P +
Sbjct: 622 MAACGDAFTLAIGAEGEVYTWGKGARGRL--GRK-------EEDFGIPKPVQLDE--SHA 670
Query: 350 WIAKLVACGGRHTLAIVEWQTEE 372
+ VAC +TL V+ EE
Sbjct: 671 FTVTSVACCHGNTLLAVKPFFEE 693
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 110/250 (44%), Gaps = 33/250 (13%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAIC-----------D 55
I+ +GSG +G LG GN + +V+AL Y++ V G+ + LA+ D
Sbjct: 419 IMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQVSCGASHVLAVTNEREVFSWGRGD 478
Query: 56 DGKT-----KTENIPSQVNALSNTKIVQAAIGGWHC-LAVDDQGRAYAWGGNEYGQCG-- 107
+G+ + N P QV+ ++ + Q + G C + + Q + A G N + + G
Sbjct: 479 NGRLGLATQDSHNCPQQVSLPADFE-AQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLD 537
Query: 108 -----EEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPW 162
EEP + +V + IV + G HSV +T +G +T+G
Sbjct: 538 KVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIV-YIDIGTAHSVAVTEKGQCFTFGSNQ 596
Query: 163 PPGDI-----KQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDT 217
G + + VP +V GL+ + + A G LA+ +G ++ WG G+LG +
Sbjct: 597 H-GQLGCSHRRSSRVPYQVSGLQGITMAACGDAFTLAIGAEGEVYTWGKGARGRLGRKE- 654
Query: 218 QPRSQPIPVQ 227
+ P PVQ
Sbjct: 655 EDFGIPKPVQ 664
>sp|Q86SG6|NEK8_HUMAN Serine/threonine-protein kinase Nek8 OS=Homo sapiens GN=NEK8 PE=1
SV=1
Length = 692
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 94/197 (47%), Gaps = 15/197 (7%)
Query: 136 VRQVAAGGTHSVVLTREGHVWTWGQP--------WPPGDIKQ-----ISVPVRVQGLEQV 182
V QVAAG T +TR G + W P PG ++Q IS + Q +
Sbjct: 334 VVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFISRFLEGQSGVTI 393
Query: 183 KLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGW 242
K +A G F L + G + +G+ G LG G SQP V+ L G +V +A G
Sbjct: 394 KHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGAS 453
Query: 243 HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALT 302
H AL+ + E++ WGRG+ GRLG G + S PQ+V + G++ +V CG S+ LT
Sbjct: 454 HVLALSTERELFAWGRGDSGRLGLGTRESHS--CPQQVPMPPGQEAQRVVCGIDSSMILT 511
Query: 303 RDGHIFSFGRGDHGRLG 319
G + G +LG
Sbjct: 512 VPGQALACGSNRFNKLG 528
Score = 85.1 bits (209), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 111/244 (45%), Gaps = 43/244 (17%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRI---LR 121
P+ V AL ++VQ A G H LA+ + +AWG + D+GR+ R
Sbjct: 434 PTIVEALLGYEMVQVACGASHVLALSTERELFAWG-------------RGDSGRLGLGTR 480
Query: 122 RDIVIPQRCA--PKLIVRQVAAGGTHSVVLTREGHVWTWG----------------QPWP 163
PQ+ P ++V G S++LT G G +P P
Sbjct: 481 ESHSCPQQVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVP 540
Query: 164 PGDIKQISVPVRVQG---LEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQ 218
+++ ++ + G L+Q L+++ G H+ A+ G + +G+N++GQLGT +
Sbjct: 541 HQQVEE-ALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRR 599
Query: 219 PRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQ 278
P VQGL G+ + +A G + A+ + EVY WG+G GRLG D D +P+
Sbjct: 600 GSRAPCKVQGLEGIKMAMVACGDAFTVAIGAESEVYSWGKGARGRLGRRDEDAG---LPR 656
Query: 279 KVNL 282
V L
Sbjct: 657 PVQL 660
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 16/176 (9%)
Query: 170 ISVPVRVQGLE-QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGD--------TQPR 220
+ P+R+ L +V +A G + G L W E LG G QP+
Sbjct: 321 LGTPLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILW---EAPPLGAGGGSLLPGAVEQPQ 377
Query: 221 SQPIP--VQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQ 278
Q I ++G SG+T+ +A G + + LTD G + +G G +G LG G S+ P
Sbjct: 378 PQFISRFLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQ--PT 435
Query: 279 KVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPI 334
V L G ++VQV+CG +H +AL+ + +F++GRGD GRLG G + + P +VP+
Sbjct: 436 IVEALLGYEMVQVACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPM 491
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 129/325 (39%), Gaps = 55/325 (16%)
Query: 71 LSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRC 130
+ NT++VQ A G V GR W G G G +L + PQ
Sbjct: 329 MLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGG---------GSLLPGAVEQPQ-- 377
Query: 131 APKLI-----------VRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVR 175
P+ I ++ VA G + LT G + T+G G + IS P
Sbjct: 378 -PQFISRFLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTI 436
Query: 176 VQGL---EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGL 232
V+ L E V+ +A GA H LAL + L+AWG + G+LG G + S P V G
Sbjct: 437 VEALLGYEMVQ-VACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQ 495
Query: 233 TLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK-------VNLLAG 285
+ G S LT G+ G +LG + VP + LL
Sbjct: 496 EAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGS 555
Query: 286 -----EDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPR 340
E ++ + G HS A+T G ++FG HG+LG + + P +V
Sbjct: 556 APLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKV-------- 607
Query: 341 NAGDGVDRRWIAKLVACGGRHTLAI 365
G++ +A +VACG T+AI
Sbjct: 608 ---QGLEGIKMA-MVACGDAFTVAI 628
Score = 39.7 bits (91), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 74/190 (38%), Gaps = 38/190 (20%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTK 60
+++ + AWG G+ G+LG+G E V + + VV G +S+ + G+
Sbjct: 458 LSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSSMILTVPGQAL 517
Query: 61 T------------------ENIPSQV--NALSNT----------KIVQAAIGGWHCLAVD 90
E +P Q ALS T ++ +G H AV
Sbjct: 518 ACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVT 577
Query: 91 DQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLT 150
G Y +G N++GQ G +T R R + K+ + VA G +V +
Sbjct: 578 ASGDCYTFGSNQHGQLG------TNTRRGSRAPCKVQGLEGIKMAM--VACGDAFTVAIG 629
Query: 151 REGHVWTWGQ 160
E V++WG+
Sbjct: 630 AESEVYSWGK 639
>sp|Q5DX34|RPGRH_CAEEL X-linked retinitis pigmentosa GTPase regulator homolog
OS=Caenorhabditis elegans GN=glo-4 PE=1 SV=1
Length = 1392
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 143/329 (43%), Gaps = 66/329 (20%)
Query: 80 AIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQV 139
A G H L + G+ AWGGN +GQCG + + + D P + ++
Sbjct: 782 ACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFR--IANLHQVDGDWPA-------IEKI 832
Query: 140 AAGGTHSVVLTREGHVWT-----WGQPWPPG--DIKQISVPVRVQGLE-QVKLIAVGAFH 191
A G HS + +G +WT WGQ G + Q+ VP RV GL +V IA G H
Sbjct: 833 ACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQL-VPTRVNGLICKVTQIACGRAH 891
Query: 192 NLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDG 251
+ L + G + G+ YGQ+G D + L L + DIA +HS +T+D
Sbjct: 892 TVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLRVRDIATHYYHSICITEDN 951
Query: 252 EVYGWGRGEH---GRLGFGDNDKSSKM---------------VPQKVNL-LAGE------ 286
V+ WGR R+ +S+++ +VNL L E
Sbjct: 952 RVFEWGRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSPSTNGSTPRVNLNLPAEIPREDL 1011
Query: 287 -----------DIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPIN 335
+IV V+CG +HS +T +G ++++G+G +LG+G K + ME P
Sbjct: 1012 GLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNK---NERME-PHQ 1067
Query: 336 IPAPRNAGDGVDRRWIAKLVACGGRHTLA 364
+ P A +W+ V+ G HT+A
Sbjct: 1068 VFEPNGA------KWVN--VSLGNNHTIA 1088
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 143/343 (41%), Gaps = 42/343 (12%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDG--- 57
++S+ + AWG GQ G+G++ + V P + + G +S IC DG
Sbjct: 791 LSSSGQLSAWGGNRFGQCGVGHSFRIANLHQVDGDWP-AIEKIACGQFHSAFICSDGSLW 849
Query: 58 ---------------KTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNE 102
+ +P++VN L K+ Q A G H + + D GR G
Sbjct: 850 TFGWGVWGQLGHGGRNNSNQLVPTRVNGLI-CKVTQIACGRAHTVVLTDTGRVLVCGSGS 908
Query: 103 YGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPW 162
YGQ G + DD ++ P P L VR +A HS+ +T + V+ WG+
Sbjct: 909 YGQMGVD----DDIKKVF---AFTPLPLGP-LRVRDIATHYYHSICITEDNRVFEWGRN- 959
Query: 163 PPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ 222
P ++K + +K I N + G+ L PR
Sbjct: 960 -PQELKM--------RMFVMKKIRSAQLKNTEDPSSPSPSTNGSTPRVNLNLPAEIPRED 1010
Query: 223 P--IPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV 280
V+ +V +A G HS +T +G +Y WG+G +LG G+ K+ +M P +V
Sbjct: 1011 LGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGN--KNERMEPHQV 1068
Query: 281 NLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRK 323
G V VS G H++A T DG +F++G+ D G+ G K
Sbjct: 1069 FEPNGAKWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCGVLTK 1111
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 80/151 (52%), Gaps = 5/151 (3%)
Query: 183 KLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGW 242
+ IA GA H L L G L AWG N +GQ G G + + V G + IA G +
Sbjct: 779 RAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANLHQVDG-DWPAIEKIACGQF 837
Query: 243 HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALT 302
HS + DG ++ +G G G+LG G + S+++VP +VN L + + Q++CG H+V LT
Sbjct: 838 HSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLICK-VTQIACGRAHTVVLT 896
Query: 303 RDGHIFSFGRGDHGRLGYG---RKVTTGQPM 330
G + G G +G++G +KV P+
Sbjct: 897 DTGRVLVCGSGSYGQMGVDDDIKKVFAFTPL 927
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 23/207 (11%)
Query: 137 RQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISV--PVRVQGLEQV-------KLIAV 187
R +A G H +VL+ G + WG Q V R+ L QV + IA
Sbjct: 779 RAIACGAEHILVLSSSGQLSAWGG----NRFGQCGVGHSFRIANLHQVDGDWPAIEKIAC 834
Query: 188 GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLT--LVDIAAGGWHST 245
G FH+ + DG+LW +G +GQLG G +Q +P + ++GL + IA G H+
Sbjct: 835 GQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTR-VNGLICKVTQIACGRAHTV 893
Query: 246 ALTDDGEVYGWGRGEHGRLGFGDN-DKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRD 304
LTD G V G G +G++G D+ K P + L DI + HS+ +T D
Sbjct: 894 VLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLRVRDI---ATHYYHSICITED 950
Query: 305 GHIFSFGRGDH---GRLGYGRKVTTGQ 328
+F +GR R+ +K+ + Q
Sbjct: 951 NRVFEWGRNPQELKMRMFVMKKIRSAQ 977
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 50/122 (40%), Gaps = 36/122 (29%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTK 60
+ S ++ WG G D QLG GN ER +EP+
Sbjct: 1037 ITSEGTLYTWGKGLDYQLGHGNKNER--------MEPH---------------------- 1066
Query: 61 TENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRIL 120
QV + K V ++G H +A D G +AWG N++GQCG ++ ++ +
Sbjct: 1067 ------QVFEPNGAKWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCGVLTKKNGNSADVT 1120
Query: 121 RR 122
++
Sbjct: 1121 KK 1122
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 22/135 (16%)
Query: 237 IAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGE--DIVQVSCG 294
IA G H L+ G++ WG G+ G G + + + + + + G+ I +++CG
Sbjct: 781 IACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANL-----HQVDGDWPAIEKIACG 835
Query: 295 GTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKL 354
HS + DG +++FG G G+LG+G + + Q + +N I K+
Sbjct: 836 QFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVN-------------GLICKV 882
Query: 355 --VACGGRHTLAIVE 367
+ACG HT+ + +
Sbjct: 883 TQIACGRAHTVVLTD 897
>sp|Q96I51|WBS16_HUMAN Williams-Beuren syndrome chromosomal region 16 protein OS=Homo
sapiens GN=WBSCR16 PE=1 SV=2
Length = 464
Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 142/312 (45%), Gaps = 42/312 (13%)
Query: 74 TKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE---EPERKDDTGRILRRDIVIPQRC 130
T+++Q + G H L + D+ ++ G N YGQCG E E ++ R+ R Q
Sbjct: 174 TRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQ-- 231
Query: 131 APKLIVRQVAAGGTHSVVLTREGHVWT--WGQPWPP--GDIKQISVPVRVQG-LEQVKLI 185
V QVA G HS+ LT +G V++ WG G S P ++ G L V +I
Sbjct: 232 -----VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGDLAGVNVI 286
Query: 186 AVGAFHN--LALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAA-GGW 242
V + + LA+ DG L+ WGN+EY QL + + SG+ V AA GG
Sbjct: 287 QVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLHFSGVGKVRQAACGGT 346
Query: 243 HSTALTDDGEVYGWGRGEHGRLGFGDNDKSS---KMVPQKVNLLAGED----IVQVSCGG 295
L +G V+ WG +G LG G N S +M+P + L + + ++ CG
Sbjct: 347 GCAVLNGEGHVFVWG---YGILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGL 403
Query: 296 THSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLV 355
+H ALT G +F +G+ G LG GR + P + P G+ VD V
Sbjct: 404 SHFAALTNKGELFVWGKNIRGCLGIGRL----EDQYFPWRVTMP---GEPVD-------V 449
Query: 356 ACGGRHTLAIVE 367
ACG H + + +
Sbjct: 450 ACGVDHMVTLAK 461
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 86/169 (50%), Gaps = 10/169 (5%)
Query: 170 ISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTG--DTQPRSQPIPVQ 227
+S+P+ +V ++ G H+L L + +++ GNN YGQ G + + S+ V
Sbjct: 164 VSLPLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVH 223
Query: 228 GLSGL--TLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV-NLLA 284
+ +V +A G HS LTD GEVY G G G+ G G + +S P K+ LA
Sbjct: 224 RMQDFDGQVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSS--PTKLGGDLA 281
Query: 285 GEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVP 333
G +++QV+ G +A++ DG +F +G ++ +L VT + VP
Sbjct: 282 GVNVIQVATYGDCCLAVSADGGLFGWGNSEYLQLA---SVTDSTQVNVP 327
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 105/275 (38%), Gaps = 44/275 (16%)
Query: 7 IIAWGSGEDGQLG--IGNNEEREWVCVVKALEPY--KVRSVVAGSRNSLAICDDGKTKT- 61
+ + G+ GQ G + NE V ++ + +V V G +SL + D G+ +
Sbjct: 195 VFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQVVQVACGQDHSLFLTDKGEVYSC 254
Query: 62 ------------ENIPSQVNAL----SNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQ 105
NI S L + ++Q A G CLAV G + WG +EY Q
Sbjct: 255 GWGADGQTGLGHYNITSSPTKLGGDLAGVNVIQVATYGDCCLAVSADGGLFGWGNSEYLQ 314
Query: 106 CGEEPERKD-DTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ---- 160
+ + R L V VRQ A GGT VL EGHV+ WG
Sbjct: 315 LASVTDSTQVNVPRCLHFSGVGK--------VRQAACGGTGCAVLNGEGHVFVWGYGILG 366
Query: 161 --PWPPGDIKQISVPVRVQGLE------QVKLIAVGAFHNLALQEDGALWAWGNNEYGQL 212
P +P + GL QV I G H AL G L+ WG N G L
Sbjct: 367 KGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLSHFAALTNKGELFVWGKNIRGCL 426
Query: 213 GTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTAL 247
G G + + P V + G VD+A G H L
Sbjct: 427 GIGRLEDQYFPWRVT-MPG-EPVDVACGVDHMVTL 459
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 75/178 (42%), Gaps = 17/178 (9%)
Query: 172 VPVRVQGLEQVKLIAVGAFHNLALQEDG---ALWAWGNNEYGQLGTGDT----------- 217
VP R++ +++ A G L + +W G N+ QLG +
Sbjct: 99 VPYRLELDQKISSAACGYGFTLLSSKTADVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYV 158
Query: 218 -QPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMV 276
+P +P+ ++ ++ G HS LTD V+ G +G+ G +
Sbjct: 159 LEPSPVSLPLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSE 218
Query: 277 PQKVNLLAGED--IVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
+V+ + D +VQV+CG HS+ LT G ++S G G G+ G G T P ++
Sbjct: 219 SHRVHRMQDFDGQVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKL 276
>sp|Q9CYF5|WBS16_MOUSE Williams-Beuren syndrome chromosomal region 16 protein homolog
OS=Mus musculus GN=Wbscr16 PE=2 SV=1
Length = 461
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 144/324 (44%), Gaps = 46/324 (14%)
Query: 64 IPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE---EPERKDDTGRIL 120
+P ++ TK++Q + G H L + D+ ++ G N +GQCG E E ++ ++
Sbjct: 161 VPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSESHKVH 220
Query: 121 RRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWT--WGQPWPP--GDIKQISVPVRV 176
R Q V QV G HS+ LT +G V++ WG G S P ++
Sbjct: 221 RMQDFDGQ-------VVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKL 273
Query: 177 QG-LEQVKLIAVGAFHN--LALQEDGALWAWGNNEYGQLG--TGDTQ---PRSQPIPVQG 228
G L V ++ V + + LAL DG ++ WGN+EY QL T TQ PR P
Sbjct: 274 GGDLAGVTVVQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLP----- 328
Query: 229 LSGLTLV-DIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGED 287
SG+ V +A GG L +G V+ WG G G+ +M+P + L +
Sbjct: 329 FSGVGKVKQVACGGTGCAVLNAEGHVFVWGYGILGKGPKLLETAIPEMIPPTLFGLTEFN 388
Query: 288 ----IVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAG 343
+ Q+ CG +H ALT G +F +G+ G LG GR P V + G
Sbjct: 389 PEVQVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTM-------PG 441
Query: 344 DGVDRRWIAKLVACGGRHTLAIVE 367
+ VD VACG H + + +
Sbjct: 442 EPVD-------VACGVDHMVTLAK 458
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 17/178 (9%)
Query: 172 VPVRVQGLEQVKLIAVGAFHNL---ALQEDGALWAWGNNEYGQLGTGDT----------- 217
VP R++ ++ A G L ++ +W G N+ QLG +
Sbjct: 96 VPYRLELDHKISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYV 155
Query: 218 -QPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMV 276
+P P+P+ ++ ++ G HS LTD V+ G HG+ G +
Sbjct: 156 LEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSE 215
Query: 277 PQKVNLLAGED--IVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEV 332
KV+ + D +VQV CG HS+ LT G ++S G G G+ G G T P ++
Sbjct: 216 SHKVHRMQDFDGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKL 273
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 52/125 (41%), Gaps = 22/125 (17%)
Query: 46 GSRNSLAICDDGKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQ 105
G+ L + + N+P + K+ Q A GG C ++ +G + WG YG
Sbjct: 305 GNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQVACGGTGCAVLNAEGHVFVWG---YGI 361
Query: 106 CGEEPERKDDTGRILRRDIVIPQRCAPKLI----------VRQVAAGGTHSVVLTREGHV 155
G+ P ++L + IP+ P L V Q+ G +H LT +G +
Sbjct: 362 LGKGP-------KLL--ETAIPEMIPPTLFGLTEFNPEVQVSQIRCGLSHFAALTNKGEL 412
Query: 156 WTWGQ 160
+ WG+
Sbjct: 413 FVWGK 417
>sp|P21827|RCC1_YEAST Guanine nucleotide exchange factor SRM1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SRM1 PE=1 SV=1
Length = 482
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 162/395 (41%), Gaps = 64/395 (16%)
Query: 23 NEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKTENIPSQVNAL---SNTKIVQA 79
N + ++ + +++P + GS L + K K P ++N KI+
Sbjct: 31 NAQEDYKHMYLSVQPLDIFCWGTGSMCELGLGPLAKNKEVKRP-RLNPFLPRDEAKIISF 89
Query: 80 AIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDD-----------------TGRILRR 122
A+GG H LA+D++ ++WG N+ G G + + +
Sbjct: 90 AVGGMHTLALDEESNVWSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELEST 149
Query: 123 DIVIPQRCAPKLI----VRQVAAGGTHSVVLTREGHVWTWGQP--------WPPGDIKQI 170
IP+ P L V Q+AA S L G V+ WG + IK
Sbjct: 150 PAKIPRESFPPLAEGHKVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQ 209
Query: 171 SVPVRVQGLEQVKLI--AVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQP-RSQPIPVQ 227
P +V + ++ A G H L L E+G ++AWGN + QLG + R + + +
Sbjct: 210 KTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPR 269
Query: 228 GLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMV--PQKVNLLAG 285
+ IA+G H ALT D ++ WG + G+ G ++ + +V P+++ L
Sbjct: 270 PFGLRHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDN 329
Query: 286 EDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLG--------YGRKVTTGQPMEVPI--- 334
I ++ G HS+ L++DG ++S GR D +G Y K G+ VP+
Sbjct: 330 VVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTK 389
Query: 335 --NIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
N+P K VA G H++A+ +
Sbjct: 390 LNNVPK-------------FKSVAAGSHHSVAVAQ 411
Score = 92.0 bits (227), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 124/267 (46%), Gaps = 32/267 (11%)
Query: 58 KTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTG 117
K K + P +V S IVQ A G H L +D++G +AWG + Q G + +
Sbjct: 205 KIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMER---- 260
Query: 118 RILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTW-----GQPWPPGDIKQ--- 169
R + P+ + V+ +A+G H LT++ + +W GQ D++
Sbjct: 261 --FRLKTLDPRPFGLRH-VKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGAL 317
Query: 170 ISVPVRVQGLEQV--KLIAVGAFHNLALQEDGALWAWGNNEYGQLGT-GDTQP------- 219
++ P R+ + V + IA G H+L L +DG L++ G + ++G D P
Sbjct: 318 VTKPKRLALPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDV 377
Query: 220 ----RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKM 275
R+ P+P + + +AAG HS A+ +G Y WG GE +G G + ++
Sbjct: 378 HGKARAVPLPTKLNNVPKFKSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPFEDDTE- 436
Query: 276 VPQKVNLLAGED--IVQVSCGGTHSVA 300
VP ++ A +D I+ V CGG SV+
Sbjct: 437 VPTRIKNTATQDHNIILVGCGGQFSVS 463
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 75 KIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPE-RKDDTGRILRRDIVIPQRCAPK 133
K+VQ A A+ G YAWG +C E D +I + +P K
Sbjct: 166 KVVQLAATDNMSCALFSNGEVYAWGT---FRCNEGILGFYQDKIKIQKTPWKVP--TFSK 220
Query: 134 LIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQ-------GLEQVKLIA 186
+ Q+A G H + L EG V+ WG +++ R++ GL VK IA
Sbjct: 221 YNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPFGLRHVKYIA 280
Query: 187 VGAFHNLALQEDGALWAWGNNEYGQLGTGD--------TQPRSQPIPVQGLSGLTLVDIA 238
G H AL +D L +WG N++GQ G + T+P+ +P + + IA
Sbjct: 281 SGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALP----DNVVIRSIA 336
Query: 239 AGGWHSTALTDDGEVYGWGRGEHGRLG----------FGDNDKSSKMVPQKVNLLAGEDI 288
AG HS L+ DG++Y GR + +G + D ++ VP L
Sbjct: 337 AGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKF 396
Query: 289 VQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDR 348
V+ G HSVA+ ++G +S+G G+ +G G P E +P D
Sbjct: 397 KSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLG-------PFEDDTEVPTRIKNTATQDH 449
Query: 349 RWIAKLVACGGRHTLA 364
I LV CGG+ +++
Sbjct: 450 NII--LVGCGGQFSVS 463
>sp|P25183|RCC1_XENLA Regulator of chromosome condensation OS=Xenopus laevis GN=rcc1 PE=2
SV=1
Length = 424
Score = 95.9 bits (237), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 150/339 (44%), Gaps = 41/339 (12%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKT- 59
+ ++ SI +G ++G LG +EE + K KV V AG ++ A+ +DG+
Sbjct: 88 LGASGSIYTFGCNDEGALGRDTSEEGSEMQPGKVELAEKVVQVSAGDSHTAALTEDGRVF 147
Query: 60 ------------------KTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGN 101
K +P QV NT +++ A G H + + G Y G
Sbjct: 148 VFGSFRDNNGVIGLLEPMKKSMVPVQVQI--NTPVIKIASGNDHLVLLTVDGDLYTSGCG 205
Query: 102 EYGQCGEEPERKDDTG--RILRRDIVIPQ------RCAPKLIVRQVAAGGTHSVVLTREG 153
E GQ G PER + G + L R +++PQ + + ++ + V G + +++EG
Sbjct: 206 EQGQLGRVPERFTNRGGRKGLER-LLVPQCIHLKAKGSGRVHFQDVFCGAYFTFAVSQEG 264
Query: 154 HVWTWG-QPWPPGDIKQISVPVRVQGLEQVKL-------IAVGAFHNLALQEDGALWAWG 205
HV+ +G + K Q L K + G H + + +G ++ G
Sbjct: 265 HVYGFGLSNYHQLGTKNTQACYAPQNLTSFKNSTKSWIGFSGGQHHTVCVDSEGKAYSLG 324
Query: 206 NNEYGQLGTGDT-QPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRL 264
EYG+LG G+ + +S+P P+ L + +A+G S A++ DG V+ WG G + +L
Sbjct: 325 RAEYGRLGLGENAEEQSEPTPIPDLPKIN--SVASGASVSYAVSTDGCVFAWGMGTNLQL 382
Query: 265 GFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTR 303
G G+ + L +++ VS GG H+V L R
Sbjct: 383 GTGEEEDVWSPEQMTGKHLEDREVLSVSSGGQHTVLLVR 421
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 183/409 (44%), Gaps = 80/409 (19%)
Query: 7 IIAWGSGEDGQLGIGNN-EEREWVCVVKALEPY------KVRSVVAGSRNSLAI--CDD- 56
++ G G+ GQLG+G + ER+ +V E + +V G+ S+ C+D
Sbjct: 43 VLTLGQGDVGQLGLGEDIMERKKPALVTLTEDIVQAAAGGMHTVCLGASGSIYTFGCNDE 102
Query: 57 -------GKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 109
+ +E P +V K+VQ + G H A+ + GR + +G
Sbjct: 103 GALGRDTSEEGSEMQPGKVELAE--KVVQVSAGDSHTAALTEDGRVFVFG---------- 150
Query: 110 PERKDDTGRI-----LRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPP 164
+D+ G I +++ +V P + V ++A+G H V+LT +G ++T G
Sbjct: 151 -SFRDNNGVIGLLEPMKKSMV-PVQVQINTPVIKIASGNDHLVLLTVDGDLYTSG----C 204
Query: 165 GDIKQIS-VPVRV------QGLEQVKL------------------IAVGAFHNLALQEDG 199
G+ Q+ VP R +GLE++ + + GA+ A+ ++G
Sbjct: 205 GEQGQLGRVPERFTNRGGRKGLERLLVPQCIHLKAKGSGRVHFQDVFCGAYFTFAVSQEG 264
Query: 200 ALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTL--VDIAAGGWHSTALTDDGEVYGWG 257
++ +G + Y QLGT +TQ P + T + + G H+ + +G+ Y G
Sbjct: 265 HVYGFGLSNYHQLGTKNTQACYAPQNLTSFKNSTKSWIGFSGGQHHTVCVDSEGKAYSLG 324
Query: 258 RGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGR 317
R E+GRLG G+N + P + L I V+ G + S A++ DG +F++G G + +
Sbjct: 325 RAEYGRLGLGENAEEQSE-PTPIPDLP--KINSVASGASVSYAVSTDGCVFAWGMGTNLQ 381
Query: 318 LGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIV 366
LG G + P ++ G ++ R + V+ GG+HT+ +V
Sbjct: 382 LGTGEEEDVWSPEQM---------TGKHLEDREVLS-VSSGGQHTVLLV 420
Score = 75.1 bits (183), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 18/187 (9%)
Query: 144 THSVVLTREGHVWTWGQPWPPGDIKQISV---------PVRVQGLEQVKLIAVGAFHNLA 194
TH T G V T GQ GD+ Q+ + P V E + A G H +
Sbjct: 32 THPSHGTVGGQVLTLGQ----GDVGQLGLGEDIMERKKPALVTLTEDIVQAAAGGMHTVC 87
Query: 195 LQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVY 254
L G+++ +G N+ G LG ++ S+ P + +V ++AG H+ ALT+DG V+
Sbjct: 88 LGASGSIYTFGCNDEGALGRDTSEEGSEMQPGKVELAEKVVQVSAGDSHTAALTEDGRVF 147
Query: 255 GWG--RGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGR 312
+G R +G +G + K S MVP +V + +++++ G H V LT DG +++ G
Sbjct: 148 VFGSFRDNNGVIGLLEPMKKS-MVPVQVQI--NTPVIKIASGNDHLVLLTVDGDLYTSGC 204
Query: 313 GDHGRLG 319
G+ G+LG
Sbjct: 205 GEQGQLG 211
>sp|Q8K1R7|NEK9_MOUSE Serine/threonine-protein kinase Nek9 OS=Mus musculus GN=Nek9 PE=1
SV=2
Length = 984
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 143/330 (43%), Gaps = 48/330 (14%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P V L I Q + G + V D+G+ YA+G + YG G + + ++ +
Sbjct: 417 PKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNF 476
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISV--------PVRV 176
+ V QV+ G H VVLTR V++WG G+ ++ + P RV
Sbjct: 477 FLSNP------VEQVSCGDNHVVVLTRNKEVYSWG----CGEYGRLGLDSEEDYYTPQRV 526
Query: 177 QGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQ------------PRSQ 222
+ + ++AV G L + G + A G NE+ +LG P +
Sbjct: 527 DVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTT 586
Query: 223 PIPV-QGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVN 281
+ + LS + IA G H+ A+ + G + +G + G+LG G+ K +N
Sbjct: 587 SFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKR-----LGIN 641
Query: 282 LLAG----EDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIP 337
LL G + +++VSCG ++A T D HIF++G G +GRL T +P I
Sbjct: 642 LLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAM---TPTERPHGSDICTS 698
Query: 338 APRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
PR + ++C G HT+ IVE
Sbjct: 699 WPRPIFGSLHH---VPDLSCRGWHTILIVE 725
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 114/268 (42%), Gaps = 65/268 (24%)
Query: 96 YAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHV 155
Y WGG + P++ D VI C+ RQV AG TH V+T E +
Sbjct: 350 YVWGGGK-----STPQKLD----------VIKSGCS----ARQVCAGNTHFAVVTVEKEL 390
Query: 156 WTWGQPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTG 215
+TW V +QG G +GQLG G
Sbjct: 391 YTW---------------VNMQG--------------------------GTKLHGQLGHG 409
Query: 216 DTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKM 275
D QP V+ L G + ++ G + +TD+G++Y +G +G +G +
Sbjct: 410 DKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVL 469
Query: 276 VPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRK--VTTGQPMEVP 333
P ++N + QVSCG H V LTR+ ++S+G G++GRLG + T Q ++VP
Sbjct: 470 EPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVP 529
Query: 334 --INIPAPRNAGDGVDRRWIA-KLVACG 358
+ I A + DG + K++ACG
Sbjct: 530 KALIIVAVQCGCDGTFLLTQSGKVLACG 557
Score = 75.5 bits (184), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 118/301 (39%), Gaps = 50/301 (16%)
Query: 11 GSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKTENI------ 64
G+ GQLG G+ V+ L+ + V G ++ + D+G+
Sbjct: 399 GTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCM 458
Query: 65 ------------PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPER 112
P Q+N + + Q + G H + + Y+WG EYG+ G + E
Sbjct: 459 GVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSE- 517
Query: 113 KDDTGRILRRDIVIPQRC-APK-LIVRQVAAGGTHSVVLTREGHVWTWG-QPWPPGDIKQ 169
D PQR PK LI+ V G + +LT+ G V G + + Q
Sbjct: 518 ---------EDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQ 568
Query: 170 I-----------SVPVRVQ-------GLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQ 211
VP +++ IA G H A+ E G L +G N+ GQ
Sbjct: 569 CMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQ 628
Query: 212 LGTGDTQPRSQPIPVQG-LSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDND 270
LG G+ + R + G L G ++ ++ G + A TDD ++ WG G +GRL +
Sbjct: 629 LGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTE 688
Query: 271 K 271
+
Sbjct: 689 R 689
>sp|Q8TD19|NEK9_HUMAN Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1
SV=2
Length = 979
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 143/330 (43%), Gaps = 48/330 (14%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P V L I Q + G + V D+G+ YA+G + YG G + + ++ +
Sbjct: 417 PKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNF 476
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISV--------PVRV 176
+ V QV+ G H VVLTR V++WG G+ ++ + P +V
Sbjct: 477 FLSNP------VEQVSCGDNHVVVLTRNKEVYSWGC----GEYGRLGLDSEEDYYTPQKV 526
Query: 177 QGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQ------------PRSQ 222
+ + ++AV G L + G + A G NE+ +LG P +
Sbjct: 527 DVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTT 586
Query: 223 PIPV-QGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVN 281
+ + LS + IA G H+ A+ + G + +G + G+LG G+ K +N
Sbjct: 587 SFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKR-----LGIN 641
Query: 282 LLAG----EDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIP 337
LL G + +++VSCG ++A T D HIF++G G +GRL T +P I
Sbjct: 642 LLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAM---TPTERPHGSDICTS 698
Query: 338 APRNAGDGVDRRWIAKLVACGGRHTLAIVE 367
PR + ++C G HT+ IVE
Sbjct: 699 WPRPIFGSLHH---VPDLSCRGWHTILIVE 725
Score = 89.0 bits (219), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 114/268 (42%), Gaps = 65/268 (24%)
Query: 96 YAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHV 155
Y WGG + P++ D VI C+ RQV AG TH V+T E +
Sbjct: 350 YVWGGGK-----STPQKLD----------VIKSGCS----ARQVCAGNTHFAVVTVEKEL 390
Query: 156 WTWGQPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTG 215
+TW V +QG G +GQLG G
Sbjct: 391 YTW---------------VNMQG--------------------------GTKLHGQLGHG 409
Query: 216 DTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKM 275
D QP V+ L G + ++ G + +TD+G++Y +G +G +G +
Sbjct: 410 DKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVL 469
Query: 276 VPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRK--VTTGQPMEVP 333
P ++N + QVSCG H V LTR+ ++S+G G++GRLG + T Q ++VP
Sbjct: 470 EPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVP 529
Query: 334 --INIPAPRNAGDGVDRRWIA-KLVACG 358
+ I A + DG + K++ACG
Sbjct: 530 KALIIVAVQCGCDGTFLLTQSGKVLACG 557
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 119/301 (39%), Gaps = 50/301 (16%)
Query: 11 GSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKTENI------ 64
G+ GQLG G+ V+ L+ +R V G ++ + D+G+
Sbjct: 399 GTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCM 458
Query: 65 ------------PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPER 112
P Q+N + + Q + G H + + Y+WG EYG+ G + E
Sbjct: 459 GVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSE- 517
Query: 113 KDDTGRILRRDIVIPQRC-APK-LIVRQVAAGGTHSVVLTREGHVWTWG-QPWPPGDIKQ 169
D PQ+ PK LI+ V G + +LT+ G V G + + Q
Sbjct: 518 ---------EDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQ 568
Query: 170 I-----------SVPVRVQ-------GLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQ 211
VP +++ IA G H A+ E G L +G N+ GQ
Sbjct: 569 CMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQ 628
Query: 212 LGTGDTQPRSQPIPVQG-LSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDND 270
LG G+ + R + G L G ++ ++ G + A TDD ++ WG G +GRL +
Sbjct: 629 LGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTE 688
Query: 271 K 271
+
Sbjct: 689 R 689
>sp|Q8BTU7|RCCD1_MOUSE RCC1 domain-containing protein 1 OS=Mus musculus GN=Rccd1 PE=2 SV=2
Length = 377
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 44/212 (20%)
Query: 181 QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAG 240
+V+ + +GA H L L G +++WG +GQLG G + +P ++ L GL + +AAG
Sbjct: 162 RVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAG 221
Query: 241 GWHSTALTDDGEVYGWGRGEHGRLGF----GDNDKSSKM--------------------- 275
GWHS L++ G++Y WG E G+L G +K+ +
Sbjct: 222 GWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVADAGA 281
Query: 276 ---------VPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTT 326
P ++L G D V SCG H+ +TR G ++++G G +G+LG+ +
Sbjct: 282 PAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSL 341
Query: 327 GQPMEVPINIPAPRNAGDGVDRRWIAKLVACG 358
+P V V+R+ + V CG
Sbjct: 342 DRPCCVEYF----------VERQLEVRAVTCG 363
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 108/254 (42%), Gaps = 53/254 (20%)
Query: 104 GQCGEEPERKDDTGRI----LRRDIVIP-----QRCAPKLIVRQVAAGGTHSVVLTREGH 154
GQ +EP R+ G + R V P Q AP+L VRQ+ G H ++L G
Sbjct: 122 GQGEDEPSRESRMGTLPLLPCARAYVTPEPPFCQPLAPELRVRQLELGAEHVLLLCAAGQ 181
Query: 155 VWTWGQ----PWPPGDIKQISVPVRVQGLEQVKL--IAVGAFHNLALQEDGALWAWGNNE 208
V++WG G ++ P ++ L+ +++ +A G +H++ L E G ++ WG NE
Sbjct: 182 VFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNE 241
Query: 209 YGQL------GTGDTQPRSQPI--------------------------PVQGLSGLTL-- 234
GQL GT + R + P L L L
Sbjct: 242 SGQLALPTRSGTENKAEREEATELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGS 301
Query: 235 --VDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVS 292
V + G H+ +T GE+Y WG G++G+LG D+ + + + ++ V+
Sbjct: 302 DAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFVERQLEVRAVT 361
Query: 293 CG--GTHSVALTRD 304
CG T+ A+ RD
Sbjct: 362 CGPWNTYVYAMERD 375
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 6/101 (5%)
Query: 219 PRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQ 278
P QP+ + L + + G H L G+V+ WG G HG+LG G + +++ P+
Sbjct: 152 PFCQPLAPE----LRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLE--AELEPR 205
Query: 279 KVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLG 319
+ L G + +V+ GG HSV L+ G I+ +G + G+L
Sbjct: 206 LLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQLA 246
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 81/206 (39%), Gaps = 36/206 (17%)
Query: 39 KVRSVVAGSRNSLAICDDGKT----------------KTENIPSQVNALSNTKIVQAAIG 82
+VR + G+ + L +C G+ + E P + AL ++ + A G
Sbjct: 162 RVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAG 221
Query: 83 GWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAG 142
GWH + + + G Y WG NE GQ P R + R + K + AG
Sbjct: 222 GWHSVCLSETGDIYIWGWNESGQLA-LPTRSGTENKAEREEATELNEDGLKEELAVADAG 280
Query: 143 G-THSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGAL 201
H + + QP+P + +P+ + + + G+ H + G L
Sbjct: 281 APAHFIAI----------QPFP----ALLDLPLGSDAV----MASCGSRHTAVVTRTGEL 322
Query: 202 WAWGNNEYGQLGTGDTQPRSQPIPVQ 227
+ WG +YGQLG D+ +P V+
Sbjct: 323 YTWGWGKYGQLGHKDSTSLDRPCCVE 348
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 63/162 (38%), Gaps = 26/162 (16%)
Query: 1 MASTTSIIAWGSGEDGQL------GIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAIC 54
++ T I WG E GQL G N ERE +A E + G + LA+
Sbjct: 228 LSETGDIYIWGWNESGQLALPTRSGTENKAERE-----EATELNE-----DGLKEELAVA 277
Query: 55 DDGK----TKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEP 110
D G + P+ ++ + V A+ G H V G Y WG +YGQ G
Sbjct: 278 DAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLG--- 334
Query: 111 ERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTRE 152
KD T L R + +L VR V G ++ V E
Sbjct: 335 -HKDSTS--LDRPCCVEYFVERQLEVRAVTCGPWNTYVYAME 373
>sp|Q7ZZC8|NEK9_XENLA Serine/threonine-protein kinase Nek9 OS=Xenopus laevis GN=nek9 PE=2
SV=1
Length = 944
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 137 RQVAAGGTHSVVLTREGHVWTW----------GQPWPPGDIKQISVPVRVQGLE--QVKL 184
RQV AG H V+T E ++TW GQ GD P V+ L+ V+
Sbjct: 354 RQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQ-LGHGDRASYRQPKHVEKLQGKSVQK 412
Query: 185 IAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRS--QPIPVQGLSGLTLVDIAAGGW 242
++ G+ + + ++G L+++G++ YG LG + +P+ V + ++ G
Sbjct: 413 VSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDS 472
Query: 243 HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALT 302
H ALT VY WG GE+GRLG D PQKV + G IV V CG S LT
Sbjct: 473 HIMALTRSKSVYSWGCGEYGRLGLDSEDDVYS--PQKVEVQRGLCIVNVCCGSDGSFLLT 530
Query: 303 RDGHIFSFGRGDHGRLGYGR 322
G + + G +H +LG +
Sbjct: 531 LTGKVLACGLNEHNKLGLNQ 550
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 99/196 (50%), Gaps = 14/196 (7%)
Query: 146 SVVLTREGHVWTWG--QPWPPGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWA 203
+VV +R V+ WG + P +++ V +G + + + G H + + L+
Sbjct: 322 AVVTSRSSEVYVWGGGKTTP----QKLDV---FKGGWRARQVCAGDAHFAVVTVEKELYT 374
Query: 204 WGNNE-----YGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGR 258
W N + +GQLG GD QP V+ L G ++ ++ G + +TD+G++Y +G
Sbjct: 375 WVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSVQKVSCGSDFTVCITDEGQLYSFGS 434
Query: 259 GEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRL 318
+G LG + S + P V+ E + QVSCG +H +ALTR ++S+G G++GRL
Sbjct: 435 DYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRL 494
Query: 319 GYGRKVTTGQPMEVPI 334
G + P +V +
Sbjct: 495 GLDSEDDVYSPQKVEV 510
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 137/339 (40%), Gaps = 66/339 (19%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P V L + + + G + + D+G+ Y++G + YG G + L D
Sbjct: 399 PKHVEKLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDF 458
Query: 125 VIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISV----------PV 174
+ + V QV+ G +H + LTR V++WG G+ ++ + V
Sbjct: 459 FLNEP------VDQVSCGDSHIMALTRSKSVYSWG----CGEYGRLGLDSEDDVYSPQKV 508
Query: 175 RVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGD------TQPRSQPIP--- 225
VQ + + G+ + L G + A G NE+ +LG Q +P
Sbjct: 509 EVQRGLCIVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTT 568
Query: 226 ----VQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVN 281
+ LS + I+ G H+ A+ + G + +G + G+LG GD K +N
Sbjct: 569 SLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKH-----LGIN 623
Query: 282 LLAG----EDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIP 337
LL G + +++VSCG + A T D HIF++G G +GRL P
Sbjct: 624 LLGGPLGGKQVIRVSCGDEFTTAATADNHIFAWGNGGNGRLAM---------------TP 668
Query: 338 APRNAGDGVDRRWIAKL---------VACGGRHTLAIVE 367
R G + W + ++C G HT+ IVE
Sbjct: 669 NERPQGSDICTSWPRPIFGSLHHVTDLSCRGWHTILIVE 707
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 136/341 (39%), Gaps = 66/341 (19%)
Query: 11 GSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKTENI------ 64
GS GQLG G+ V+ L+ V+ V GS ++ I D+G+ +
Sbjct: 381 GSKLHGQLGHGDRASYRQPKHVEKLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCL 440
Query: 65 ------------PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPER 112
P V+ N + Q + G H +A+ Y+WG EYG+ G + E
Sbjct: 441 GVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSE- 499
Query: 113 KDDTGRILRRDIVIPQRCAPK--LIVRQVAAGGTHSVVLTREGHVWTWG---------QP 161
D+ PQ+ + L + V G S +LT G V G
Sbjct: 500 ---------DDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQ 550
Query: 162 WPPGDIKQIS---VPVRVQ-------GLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQ 211
+ G I + VP +++ I+ G H A+ E G L +G+N+ GQ
Sbjct: 551 YTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQ 610
Query: 212 LGTGDTQPRSQPIPVQG--LSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDN 269
LG GD + + I + G L G ++ ++ G +TA T D ++ WG G +GRL N
Sbjct: 611 LGVGDYR-KHLGINLLGGPLGGKQVIRVSCGDEFTTAATADNHIFAWGNGGNGRLAMTPN 669
Query: 270 DKSSKMVPQKVNLLAG---------EDIVQVSCGGTHSVAL 301
++ PQ ++ + +SC G H++ +
Sbjct: 670 ER-----PQGSDICTSWPRPIFGSLHHVTDLSCRGWHTILI 705
>sp|Q8SSY6|SPKUL_DICDI Bifunctional serine/threonine-protein kinase/NEDD4-like E3
ubiquitin-protein ligase OS=Dictyostelium discoideum
GN=DDB_G0276527 PE=3 SV=2
Length = 1887
Score = 90.5 bits (223), Expect = 2e-17, Method: Composition-based stats.
Identities = 64/229 (27%), Positives = 114/229 (49%), Gaps = 31/229 (13%)
Query: 133 KLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQI----------SVPVRVQGLEQV 182
K+ + +++ G S V+T +G ++T+G+ GD ++ S P VQ L+
Sbjct: 337 KIKIVKLSCGTNRSAVITDKGLLFTFGR----GDHGRLGLGEQSLLMQSTPKLVQSLQGH 392
Query: 183 KLI--AVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQ----------GLS 230
+I + G H+L L G ++++G N+ GQLG G Q IP Q
Sbjct: 393 FIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGIG-CFSNQQTIPKQIQWFQTSQQQQQQ 451
Query: 231 GLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVN----LLAGE 286
+ ++ ++AGG+HS A++D+ + Y WGR ++G LG + + + +P +N ++
Sbjct: 452 PINIIKVSAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNV 511
Query: 287 DIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPIN 335
+ VS G H+VA++ DG ++S+G RLG+ P + IN
Sbjct: 512 KFIDVSSGFQHNVAMSIDGSLYSWGCNAGQRLGFKSDENQLTPKKCFIN 560
Score = 87.4 bits (215), Expect = 2e-16, Method: Composition-based stats.
Identities = 59/188 (31%), Positives = 85/188 (45%), Gaps = 44/188 (23%)
Query: 180 EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPV---QGLSGLTLVD 236
+++ LI+ GA H+ + + G L+ +G+ G+LG G+ + S P V Q L +V
Sbjct: 188 QKIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVS 247
Query: 237 IAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDN-DKSSKMVPQKVNL------------- 282
IA GG HS ALT G+VY WG + +LG G+ S +PQ +N
Sbjct: 248 IANGGKHSLALTICGKVYSWGGNDSCQLGLGNGSSSSYYSLPQLINFNISYNNNNNNNNN 307
Query: 283 ---------------------------LAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDH 315
IV++SCG S +T G +F+FGRGDH
Sbjct: 308 NSTNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLFTFGRGDH 367
Query: 316 GRLGYGRK 323
GRLG G +
Sbjct: 368 GRLGLGEQ 375
Score = 76.6 bits (187), Expect = 3e-13, Method: Composition-based stats.
Identities = 57/229 (24%), Positives = 117/229 (51%), Gaps = 35/229 (15%)
Query: 75 KIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG--EEPERKDDTGRILRRDIVIPQRCAP 132
KIV+ + G + D+G + +G ++G+ G E+ T +++ Q
Sbjct: 339 KIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLV-------QSLQG 391
Query: 133 KLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI------KQISVPVRVQGLE------ 180
I+ +++GG HS+VLT +G V+++G+ G + Q ++P ++Q +
Sbjct: 392 HFII-DMSSGGGHSLVLTNKGLVFSFGRN-DQGQLGIGCFSNQQTIPKQIQWFQTSQQQQ 449
Query: 181 ----QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTG-DTQ-PRSQPIPVQG----LS 230
+ ++ G +H++A+ ++ +AWG ++YG LGT D Q R+ P+ + +
Sbjct: 450 QQPINIIKVSAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVD 509
Query: 231 GLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 279
+ +D+++G H+ A++ DG +Y WG RLGF ++ +++ P+K
Sbjct: 510 NVKFIDVSSGFQHNVAMSIDGSLYSWGCNAGQRLGFKSDE--NQLTPKK 556
Score = 51.6 bits (122), Expect = 1e-05, Method: Composition-based stats.
Identities = 39/182 (21%), Positives = 83/182 (45%), Gaps = 33/182 (18%)
Query: 7 IIAWGSGEDGQLGIGNNE--EREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK------ 58
+ +G G+ G+LG+G + +V++L+ + + + +G +SL + + G
Sbjct: 359 LFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGR 418
Query: 59 -----------TKTENIPSQVNALSNT--------KIVQAAIGGWHCLAVDDQGRAYAWG 99
+ + IP Q+ + I++ + GG+H +A+ D YAWG
Sbjct: 419 NDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTYAWG 478
Query: 100 GNEYGQCGEEPERKDDTGR--ILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWT 157
++YG G + + D ++ + V+ K I V++G H+V ++ +G +++
Sbjct: 479 RSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNV--KFI--DVSSGFQHNVAMSIDGSLYS 534
Query: 158 WG 159
WG
Sbjct: 535 WG 536
Score = 41.2 bits (95), Expect = 0.012, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 75 KIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKL 134
KIV + G H + DQG Y +G G+ G + +++ + P L
Sbjct: 189 KIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEF-----FQTKPSL 243
Query: 135 IVRQVAAGGTHSVVLTREGHVWTWG 159
V +A GG HS+ LT G V++WG
Sbjct: 244 RVVSIANGGKHSLALTICGKVYSWG 268
Score = 40.0 bits (92), Expect = 0.025, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 286 EDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDG 345
+ IV +S G HS +T G++++FG G G+LG+G + P V P
Sbjct: 188 QKIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKP------ 241
Query: 346 VDRRWIAKLVACGGRHTLAI 365
R ++ +A GG+H+LA+
Sbjct: 242 -SLRVVS--IANGGKHSLAL 258
Score = 35.4 bits (80), Expect = 0.70, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 75 KIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 107
++V A GG H LA+ G+ Y+WGGN+ Q G
Sbjct: 244 RVVSIANGGKHSLALTICGKVYSWGGNDSCQLG 276
>sp|Q91ZR4|NEK8_MOUSE Serine/threonine-protein kinase Nek8 OS=Mus musculus GN=Nek8 PE=1
SV=1
Length = 698
Score = 89.0 bits (219), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 110/240 (45%), Gaps = 35/240 (14%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P+ V AL ++VQ A G H LA+ G +AWG + G+ G +
Sbjct: 440 PTIVEALLGYEMVQVACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNC-------- 491
Query: 125 VIPQRC--APKLIVRQVAAGGTHSVVLTREGHVWTWG----------------QPWPPGD 166
PQ+ AP ++V G S++LT G V G +P P
Sbjct: 492 --PQQVPVAPGQEAQRVVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQ 549
Query: 167 IKQI--SVPVRVQGLEQVKLIAV--GAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQ 222
+++ P+ L+Q L+ V G H+ A+ G + +G+N++GQLGT +
Sbjct: 550 VEEALSFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRA 609
Query: 223 PIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNL 282
P VQGL G+ +V +A G + A+ +GEVY WG+G GRLG D D +P+ V L
Sbjct: 610 PCRVQGLEGIKMVMVACGDAFTVAVGAEGEVYSWGKGTRGRLGRRDEDAG---LPRPVQL 666
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 146/386 (37%), Gaps = 110/386 (28%)
Query: 71 LSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRC 130
+ NT++VQ A G V GR W G G G +L + +PQ
Sbjct: 335 MLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGG---------GTLLPGAVELPQ-- 383
Query: 131 APKLI-----------VRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVR 175
P+ + ++ VA G + LT G + T+G G++ IS P
Sbjct: 384 -PQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTI 442
Query: 176 VQGL---EQVKLIAVGAFHNLALQEDGALWAW---------------------------- 204
V+ L E V+ +A GA H LAL DG L+AW
Sbjct: 443 VEALLGYEMVQ-VACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPVAPGQ 501
Query: 205 ------------------------GNNEYGQLGTGDTQPRSQPIPVQ------------- 227
G+N + +LG +P+P Q
Sbjct: 502 EAQRVVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGS 561
Query: 228 -GLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGE 286
L L+ + G HS A+T G+ Y +G +HG+L G + + P +V L G
Sbjct: 562 APLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQL--GTSSRRVSRAPCRVQGLEGI 619
Query: 287 DIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGV 346
+V V+CG +VA+ +G ++S+G+G GRLG R G P V ++ P
Sbjct: 620 KMVMVACGDAFTVAVGAEGEVYSWGKGTRGRLGR-RDEDAGLPRPVQLDETHP------- 671
Query: 347 DRRWIAKLVACGGRHTLAIVEWQTEE 372
++ V+C +TL V T+E
Sbjct: 672 ---YMVTSVSCCHGNTLLAVRSVTDE 694
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 23/206 (11%)
Query: 170 ISVPVRVQGLE-QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIP--- 225
+S P+R+ L +V +A G + G L W G G G P + +P
Sbjct: 327 LSSPLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGA-GGGTLLPGAVELPQPQ 385
Query: 226 -----VQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV 280
++G SG+T+ +A G + LTD G + +G G +G LG G+ S+ P V
Sbjct: 386 FVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQ--PTIV 443
Query: 281 NLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPR 340
L G ++VQV+CG +H +AL+ DG +F++GRGD GRLG G + + P +VP+ AP
Sbjct: 444 EALLGYEMVQVACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPV---APG 500
Query: 341 NAGD----GVDRRWIA----KLVACG 358
G+D I +++ACG
Sbjct: 501 QEAQRVVCGIDSSMILTSPGRVLACG 526
>sp|P0C5Y8|ALS2_RAT Alsin OS=Rattus norvegicus GN=Als2 PE=2 SV=1
Length = 1651
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 92/180 (51%), Gaps = 16/180 (8%)
Query: 136 VRQVAAGGTHSVVLTREGHVWTWGQ-PWPPGDIKQI--SVPVRVQGL--EQVKLIAVGAF 190
V Q A G H V+LT +G V+++G PW + +I S P+ L V +A G+F
Sbjct: 43 VLQAALGVKHGVLLTEDGEVYSFGTLPWK-SEAAEICPSSPLLESALVGHHVVTVATGSF 101
Query: 191 HNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPV-------QGLSGLTLVDIAAGGWH 243
H+ A+ E G ++ WG N GQ + Q S+P PV L + ++ +A G H
Sbjct: 102 HSGAVTESGVVYMWGENAAGQCAVANQQYVSEPSPVSISDSETSPLLAVRILQLACGEEH 161
Query: 244 STALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTR 303
+ AL+ E++ WG G +LG PQKV LAG ++QV+CG HS+AL +
Sbjct: 162 TLALSISREIWAWGTG--CQLGLITTTFPVTK-PQKVEHLAGRVVLQVACGAFHSLALVQ 218
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 100/229 (43%), Gaps = 42/229 (18%)
Query: 164 PGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGAL-------WAWGNNEYGQLGTGD 216
PG + Q+S P ++ +VK V + + D L W WG + GQLG GD
Sbjct: 479 PGLLSQVS-PRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGD 537
Query: 217 TQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMV 276
PR QP+ V+ L G ++ + AGG HS ALT +VY WG G+LG + + V
Sbjct: 538 VLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNTFGQLGHSEFPTT---V 594
Query: 277 PQKVNLLAGEDIVQVSCGGTHSVAL--TRDGH--IFSFGRGDHG---------------- 316
P+ + + + V+ G +S+ L T D ++ GR D
Sbjct: 595 PRLSKVSSESGVWSVAAGHGYSLFLVDTEDFQPGLYYSGRQDRAEGDTLPENPSGTTTPV 654
Query: 317 -----RLGYGRKVTTGQPMEVPI---NIP---APRNAGDGVDRRWIAKL 354
+LGY +VT G+ + + NI A + +RR+ +KL
Sbjct: 655 LLSCSKLGYISRVTAGKDSYLALVDKNIMGYIASLHELATTERRFYSKL 703
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 22/188 (11%)
Query: 186 AVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHST 245
A+G H + L EDG ++++G + + P S P+ L G +V +A G +HS
Sbjct: 47 ALGVKHGVLLTEDGEVYSFGTLPWKS-EAAEICP-SSPLLESALVGHHVVTVATGSFHSG 104
Query: 246 ALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVN------LLAGEDIVQVSCGGTHSV 299
A+T+ G VY WG G+ + S+ P ++ LLA I+Q++CG H++
Sbjct: 105 AVTESGVVYMWGENAAGQCAVANQQYVSEPSPVSISDSETSPLLAVR-ILQLACGEEHTL 163
Query: 300 ALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGG 359
AL+ I+++G G +LG +TT P+ P + + + R + + VACG
Sbjct: 164 ALSISREIWAWGTG--CQLGL---ITTTFPVTKPQKV-------EHLAGRVVLQ-VACGA 210
Query: 360 RHTLAIVE 367
H+LA+V+
Sbjct: 211 FHSLALVQ 218
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 63/138 (45%), Gaps = 10/138 (7%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P +AL +V A G +H AV + G Y WG N GQC ++ +
Sbjct: 82 PLLESALVGHHVVTVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVSEPSPVS--- 138
Query: 125 VIPQRCAPKLIVR--QVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQ---ISVPVRVQGL 179
+ +P L VR Q+A G H++ L+ +W WG G I ++ P +V+ L
Sbjct: 139 ISDSETSPLLAVRILQLACGEEHTLALSISREIWAWGTGCQLGLITTTFPVTKPQKVEHL 198
Query: 180 --EQVKLIAVGAFHNLAL 195
V +A GAFH+LAL
Sbjct: 199 AGRVVLQVACGAFHSLAL 216
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 74/173 (42%), Gaps = 25/173 (14%)
Query: 196 QEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYG 255
+E G + W Q G+ P P G G T++ A G H LT+DGEVY
Sbjct: 15 KERGLVHVW------QAGSFSLTPERLP----GWGGKTVLQAALGVKHGVLLTEDGEVYS 64
Query: 256 WGRGEHGRLGFGDNDKSSKMVPQKVNL---LAGEDIVQVSCGGTHSVALTRDGHIFSFGR 312
+G +++++ P L L G +V V+ G HS A+T G ++ +G
Sbjct: 65 FGT-------LPWKSEAAEICPSSPLLESALVGHHVVTVATGSFHSGAVTESGVVYMWGE 117
Query: 313 GDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
G+ + +P P++I + R I +L ACG HTLA+
Sbjct: 118 NAAGQCAVANQQYVSEPS--PVSISDSETSPLLAVR--ILQL-ACGEEHTLAL 165
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 10/138 (7%)
Query: 118 RILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVP 173
R+LR+ + R +++ +G +++ + VWTWG+ GD+ P
Sbjct: 488 RLLRKAARVKTRT---VVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQP 544
Query: 174 VRVQGLE--QVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSG 231
+ V+ L+ +V + G H+LAL +++WG+N +GQLG + P + P + S
Sbjct: 545 LCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNTFGQLGHSEF-PTTVPRLSKVSSE 603
Query: 232 LTLVDIAAGGWHSTALTD 249
+ +AAG +S L D
Sbjct: 604 SGVWSVAAGHGYSLFLVD 621
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 36/103 (34%)
Query: 5 TSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKTENI 64
T + WG G++GQLG G+ V+ L+P V+ C DGK
Sbjct: 520 TEVWTWGKGKEGQLGHGD--------VLPRLQPLCVK------------CLDGK------ 553
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 107
+++ GG H LA+ + + Y+WG N +GQ G
Sbjct: 554 ----------EVIHLEAGGSHSLALTAKSQVYSWGSNTFGQLG 586
Score = 32.7 bits (73), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 96 YAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHV 155
+ WG + GQ G G +L R + +C V + AGG+HS+ LT + V
Sbjct: 523 WTWGKGKEGQLGH--------GDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQV 574
Query: 156 WTWG 159
++WG
Sbjct: 575 YSWG 578
>sp|Q920R0|ALS2_MOUSE Alsin OS=Mus musculus GN=Als2 PE=1 SV=3
Length = 1651
Score = 83.6 bits (205), Expect = 2e-15, Method: Composition-based stats.
Identities = 60/179 (33%), Positives = 88/179 (49%), Gaps = 14/179 (7%)
Query: 136 VRQVAAGGTHSVVLTREGHVWTWGQ-PWPPGDIKQI-SVPVRVQGL--EQVKLIAVGAFH 191
V Q A G H V+LT +G V+++G PW + S P+ L V +A G+FH
Sbjct: 43 VLQAALGVRHGVLLTEDGEVYSFGTLPWKSESAEICPSSPLLESALVGHHVITVATGSFH 102
Query: 192 NLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLT-------LVDIAAGGWHS 244
+ A+ E G ++ WG N GQ + Q +P PV T ++ +A G H+
Sbjct: 103 SGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPVSISDSETSPSLAVRILQLACGEEHT 162
Query: 245 TALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTR 303
AL+ E++ WG G +LG PQKV LAG ++QV+CG HS+AL +
Sbjct: 163 LALSLSREIWAWGTG--CQLGL-ITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQ 218
Score = 70.5 bits (171), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 201 LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGE 260
+W WG + GQLG GD PR QP+ V+ L G ++ + AGG HS ALT +VY WG
Sbjct: 522 VWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNT 581
Query: 261 HGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVAL 301
G+LG + + VP+ + + + V+ G +S+ L
Sbjct: 582 FGQLG---HSEFPTTVPRLSKVSSENGVWSVAAGQDYSLFL 619
Score = 64.3 bits (155), Expect = 2e-09, Method: Composition-based stats.
Identities = 53/189 (28%), Positives = 95/189 (50%), Gaps = 24/189 (12%)
Query: 186 AVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHST 245
A+G H + L EDG ++++G + + + + P S P+ L G ++ +A G +HS
Sbjct: 47 ALGVRHGVLLTEDGEVYSFGTLPW-KSESAEICP-SSPLLESALVGHHVITVATGSFHSG 104
Query: 246 ALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGED-------IVQVSCGGTHS 298
A+T+ G VY WG G+ + + P V++ E I+Q++CG H+
Sbjct: 105 AVTESGVVYMWGENAAGQCAVANQQYVPE--PSPVSISDSETSPSLAVRILQLACGEEHT 162
Query: 299 VALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACG 358
+AL+ I+++G G +LG +TT P+ P + + + R + + VACG
Sbjct: 163 LALSLSREIWAWGTG--CQLGL---ITTTFPVTKPQKV-------EHLAGRVVLQ-VACG 209
Query: 359 GRHTLAIVE 367
H+LA+V+
Sbjct: 210 AFHSLALVQ 218
Score = 58.5 bits (140), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 252 EVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFG 311
EV+ WG+G+ G+LG GD ++ P V L G++++ + GG+HS+ALT ++S+G
Sbjct: 521 EVWTWGKGKEGQLGHGD--VLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWG 578
Query: 312 RGDHGRLGYGRKVTT 326
G+LG+ TT
Sbjct: 579 SNTFGQLGHSEFPTT 593
Score = 56.2 bits (134), Expect = 4e-07, Method: Composition-based stats.
Identities = 42/138 (30%), Positives = 63/138 (45%), Gaps = 10/138 (7%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILRRDI 124
P +AL ++ A G +H AV + G Y WG N GQC ++ +
Sbjct: 82 PLLESALVGHHVITVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPVS--- 138
Query: 125 VIPQRCAPKLIVR--QVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQ---ISVPVRVQGL 179
+ +P L VR Q+A G H++ L+ +W WG G I ++ P +V+ L
Sbjct: 139 ISDSETSPSLAVRILQLACGEEHTLALSLSREIWAWGTGCQLGLITTTFPVTKPQKVEHL 198
Query: 180 --EQVKLIAVGAFHNLAL 195
V +A GAFH+LAL
Sbjct: 199 AGRVVLQVACGAFHSLAL 216
Score = 49.7 bits (117), Expect = 3e-05, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 74/173 (42%), Gaps = 25/173 (14%)
Query: 196 QEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYG 255
+E G + W Q G+ P P G G T++ A G H LT+DGEVY
Sbjct: 15 KERGLVHVW------QAGSFSLTPERLP----GWGGKTVLQAALGVRHGVLLTEDGEVYS 64
Query: 256 WGRGEHGRLGFGDNDKSSKMVPQKVNL---LAGEDIVQVSCGGTHSVALTRDGHIFSFGR 312
+G +S+++ P L L G ++ V+ G HS A+T G ++ +G
Sbjct: 65 FGT-------LPWKSESAEICPSSPLLESALVGHHVITVATGSFHSGAVTESGVVYMWGE 117
Query: 313 GDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAI 365
G+ + +P P++I + R I +L ACG HTLA+
Sbjct: 118 NAAGQCAVANQQYVPEPS--PVSISDSETSPSLAVR--ILQL-ACGEEHTLAL 165
Score = 43.9 bits (102), Expect = 0.002, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 12/139 (8%)
Query: 118 RILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQ 177
R+LR+ + R +++ +G +++ + VWTWG+ G + V R+Q
Sbjct: 488 RLLRKAARVKTR---TVVLTPTYSGEADALLPSLRTEVWTWGKG-KEGQLGHGDVLPRLQ 543
Query: 178 GL-------EQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQPIPVQGLS 230
L ++V + G H+LAL +++WG+N +GQLG + P + P + S
Sbjct: 544 PLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNTFGQLGHSEF-PTTVPRLSKVSS 602
Query: 231 GLTLVDIAAGGWHSTALTD 249
+ +AAG +S L D
Sbjct: 603 ENGVWSVAAGQDYSLFLVD 621
Score = 43.9 bits (102), Expect = 0.002, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 36/103 (34%)
Query: 5 TSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKTENI 64
T + WG G++GQLG G+ V+ L+P V+ C DGK
Sbjct: 520 TEVWTWGKGKEGQLGHGD--------VLPRLQPLCVK------------CLDGK------ 553
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 107
+++ GG H LA+ + + Y+WG N +GQ G
Sbjct: 554 ----------EVIHLEAGGSHSLALTAKSQVYSWGSNTFGQLG 586
Score = 35.4 bits (80), Expect = 0.78, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 96 YAWGGNEYGQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHV 155
+ WG + GQ G G +L R + +C V + AGG+HS+ LT + V
Sbjct: 523 WTWGKGKEGQLGH--------GDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQV 574
Query: 156 WTWG 159
++WG
Sbjct: 575 YSWG 578
>sp|P52499|RCC1_CANAX Protein RCC1 OS=Candida albicans GN=RCC1 PE=3 SV=1
Length = 464
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 153/414 (36%), Gaps = 134/414 (32%)
Query: 2 ASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKTKT 61
++ + WG+G +LG+G + + + V + L PY + G
Sbjct: 21 STPLDVFVWGTGSMCELGLGPSAKNKEVKRPR-LNPYLTEEKLGG--------------- 64
Query: 62 ENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRILR 121
TKIV A+GG H LA+D + R ++WGGN+ G R + +
Sbjct: 65 ------------TKIVDFAVGGMHTLALDGKNRIWSWGGNDSEVLG----RDTCQAKEVL 108
Query: 122 RDI----------------VIPQRCAPKLI-------VRQVAAGGTHSVVLTREGHVWTW 158
+DI + P L+ + Q+AA S L G V++W
Sbjct: 109 KDIDGKNGNDDDDDDEDGDLNEAESTPALVENLPEGEIVQLAATDNLSAALLSNGDVYSW 168
Query: 159 G--------QPWPPGDIKQISVPVRVQGLEQ----------------------------- 181
G + +IK P++++ L++
Sbjct: 169 GCFRCNEGLLGFLRDEIKLQKTPLKIKELKKHCPIMRSVKIILLALDSKEWMPGVNGQQY 228
Query: 182 ------------------------VKLIAVGAFHNLALQEDGALWAWGNNEYGQLG-TGD 216
+K IA G FH A+ ++AWG N+YGQ TGD
Sbjct: 229 QLGRRILERHRYRSLEPQQFGLYNIKYIASGDFHCFAIDHSHNVYAWGLNQYGQCALTGD 288
Query: 217 T------QPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLG----- 265
+P + LS + +IAAG H+ ALT+DG+VY WGR + +G
Sbjct: 289 NGELEDGSVLMKPTLIPELSHKGIKEIAAGEHHTLALTEDGQVYAWGRYDMKEIGIPKDK 348
Query: 266 -----FGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGD 314
F N + NL A + I + G HS A+T DG ++++G +
Sbjct: 349 LPKSTFKINTGTHGSFSFLQNLFAVK-IKTIGVGSHHSFAVTEDGVVYAWGFAE 401
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 85/193 (44%), Gaps = 31/193 (16%)
Query: 136 VRQVAAGGTHSVVLTREGHVWTWG-----QPWPPGDIKQIS------VPVRVQGLEQ--V 182
++ +A+G H + +V+ WG Q GD ++ P + L +
Sbjct: 253 IKYIASGDFHCFAIDHSHNVYAWGLNQYGQCALTGDNGELEDGSVLMKPTLIPELSHKGI 312
Query: 183 KLIAVGAFHNLALQEDGALWAWGNNEYGQLGT-GDTQPRS----------QPIPVQGLSG 231
K IA G H LAL EDG ++AWG + ++G D P+S +Q L
Sbjct: 313 KEIAAGEHHTLALTEDGQVYAWGRYDMKEIGIPKDKLPKSTFKINTGTHGSFSFLQNLFA 372
Query: 232 LTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFG----DNDKSSKMVPQKVNLLAGED 287
+ + I G HS A+T+DG VY WG E G G D +K +++V ED
Sbjct: 373 VKIKTIGVGSHHSFAVTEDGVVYAWGFAETYGPGLGPSIDDVEKPTRIVNTATK---NED 429
Query: 288 IVQVSCGGTHSVA 300
I+ + GG SV+
Sbjct: 430 ILLIGAGGQFSVS 442
Score = 41.6 bits (96), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 24/128 (18%)
Query: 65 PSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPER------KDDTG- 117
P+ + LS+ I + A G H LA+ + G+ YAWG + + G ++ K +TG
Sbjct: 301 PTLIPELSHKGIKEIAAGEHHTLALTEDGQVYAWGRYDMKEIGIPKDKLPKSTFKINTGT 360
Query: 118 ----RILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG--QPWPPG---DIK 168
L+ + ++ + G HS +T +G V+ WG + + PG I
Sbjct: 361 HGSFSFLQNLFAVK--------IKTIGVGSHHSFAVTEDGVVYAWGFAETYGPGLGPSID 412
Query: 169 QISVPVRV 176
+ P R+
Sbjct: 413 DVEKPTRI 420
Score = 36.2 bits (82), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 252 EVYGWGRGEHGRLGFGDNDKSSKMVPQKVN------LLAGEDIVQVSCGGTHSVALTRDG 305
+V+ WG G LG G + K+ ++ ++N L G IV + GG H++AL
Sbjct: 25 DVFVWGTGSMCELGLGPSAKNKEVKRPRLNPYLTEEKLGGTKIVDFAVGGMHTLALDGKN 84
Query: 306 HIFSFGRGDHGRLG 319
I+S+G D LG
Sbjct: 85 RIWSWGGNDSEVLG 98
>sp|Q54Q89|RCCDC_DICDI RCC1 repeat-containing protein DDB_G0284033 OS=Dictyostelium
discoideum GN=DDB_G0284033 PE=4 SV=2
Length = 487
Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 76/145 (52%), Gaps = 7/145 (4%)
Query: 182 VKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQP--IPVQGLSGLTLVDIAA 239
+K I++GA +AL DG L+++G++ + +LG GD +P I Q L ++D+
Sbjct: 244 IKKISMGATFTIALSNDGKLYSFGSSTFNELGNGDMFNEREPKLIDNQLLQDNEIIDLEC 303
Query: 240 GGWHSTALTDDGEVYGWGRGEHGRL-----GFGDNDKSSKMVPQKVNLLAGEDIVQVSCG 294
G +H+ ALT D ++ WGR + + G G ++ +L + I+Q+
Sbjct: 304 GFFHTVALTSDNKILTWGRNQESQCFPVPEGTGKGSFTNVQYLDTSSLGDHDKIIQIGAS 363
Query: 295 GTHSVALTRDGHIFSFGRGDHGRLG 319
+S LT +G+I+S G DHG+ G
Sbjct: 364 NLNSYILTENGNIYSIGSNDHGQCG 388
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/290 (20%), Positives = 111/290 (38%), Gaps = 61/290 (21%)
Query: 7 IIAWGSGEDGQLGIGNNEEREWVCVV-KALEPYKVRSVVAGSRNSLAICDDGKTKT---- 61
I+ WG+ GQ+G ++ K L ++ + G+ ++A+ +DGK +
Sbjct: 210 ILLWGASNSGQIGSPEYNRVQYDPYNNKVLSEIGIKKISMGATFTIALSNDGKLYSFGSS 269
Query: 62 ------------ENIPSQVN--ALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 107
E P ++ L + +I+ G +H +A+ + WG N+ QC
Sbjct: 270 TFNELGNGDMFNEREPKLIDNQLLQDNEIIDLECGFFHTVALTSDNKILTWGRNQESQCF 329
Query: 108 EEPE----------RKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWT 157
PE + DT + D +I Q+ A +S +LT G++++
Sbjct: 330 PVPEGTGKGSFTNVQYLDTSSLGDHDKII-----------QIGASNLNSYILTENGNIYS 378
Query: 158 WGQPWPPGDIKQISVP---VRVQGLEQVKL-----IAVGAFHN-----LALQEDGALWAW 204
G D Q + + L ++K+ I V F++ + DG + W
Sbjct: 379 IG----SNDHGQCGIEKSNFKKGILNKIKIGDDGNIKVKKFYSRFKTVIVETTDGRFFGW 434
Query: 205 GNNEYGQLGTGDTQPRSQPIPVQGLSGL----TLVDIAAGGWHSTALTDD 250
G+N QL P+ + L+ L ++DI+ H +L +
Sbjct: 435 GSNFDHQLALETRCIYFTPMELNNLNRLHKDYNIIDISISLSHCISLNSN 484
Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 74/194 (38%), Gaps = 33/194 (17%)
Query: 195 LQEDGALWAWGNNEYGQL--GTGDTQP-------RSQPIPVQGLSGLTLVDIAAGGWHST 245
+++ + G+N QL G G Q S + + G L + +G +H+
Sbjct: 130 IKDRQVFYGCGDNRDAQLIVGNGKIQSLENIELLESPMLKSDQMKGKQLKQLISGTYHNA 189
Query: 246 AL-------------TDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVS 292
+ D + WG G++G + ++ + P +L+ I ++S
Sbjct: 190 CILNDSNSNNNNNNNKDRSLILLWGASNSGQIGSPEYNRV-QYDPYNNKVLSEIGIKKIS 248
Query: 293 CGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAGDGVDRRWIA 352
G T ++AL+ DG ++SFG LG G +P + + D
Sbjct: 249 MGATFTIALSNDGKLYSFGSSTFNELGNGDMFNEREPKLIDNQLLQDNEIID-------- 300
Query: 353 KLVACGGRHTLAIV 366
+ CG HT+A+
Sbjct: 301 --LECGFFHTVALT 312
Score = 33.1 bits (74), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 73/142 (51%), Gaps = 24/142 (16%)
Query: 241 GWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGED---------IVQV 291
G+ S+ ++ +VY WG G +G+LG G D++ +VP+++ + +D I ++
Sbjct: 59 GYSSSQYSN--KVYSWGSGLNGKLGHGL-DETKIVVPKEIEIKEDDDNNRVFNQGKINKI 115
Query: 292 SCGGTHSVA----LTRDGHIFSFGRGDH--GRLGYGR-KVTTGQPMEVPINIPAPRNAGD 344
+ G T+S+ +D +F +G GD+ +L G K+ + + +E+ + +P D
Sbjct: 116 TSGTTYSIFSGYDQIKDRQVF-YGCGDNRDAQLIVGNGKIQSLENIEL---LESPMLKSD 171
Query: 345 GVDRRWIAKLVACGGRHTLAIV 366
+ + + +L++ G H I+
Sbjct: 172 QMKGKQLKQLIS-GTYHNACIL 192
>sp|P25171|RCC1_DROME Regulator of chromosome condensation OS=Drosophila melanogaster
GN=Bj1 PE=1 SV=2
Length = 547
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 142/338 (42%), Gaps = 45/338 (13%)
Query: 1 MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGK-- 58
+ + I ++G ++G LG +E+ P K + AG +S + +DG+
Sbjct: 89 LTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALCISAGDSHSACLLEDGRVF 148
Query: 59 --------------TKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEYG 104
T N + ++ + T A G H + + G+ + G E G
Sbjct: 149 AWGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQG 208
Query: 105 QCGEEPERK-DDTGRILRRDIVIPQRCAPKLIVRQV----AAGGTHSVVLTREGH---VW 156
Q G ER GR +RD++ P + LI+ + A T+ RE +W
Sbjct: 209 QLGRLSERSISGEGRRGKRDLLRPTQ----LIITRAKPFEAIWATNYCTFMRESQTQVIW 264
Query: 157 TWGQPWPPGDIKQIS----------VPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGN 206
G + KQ++ P++ + L+ ++ IA G H + L D G
Sbjct: 265 ATGL----NNFKQLAHETKGKEFALTPIKTE-LKDIRHIAGGQHHTVILTTDLKCSVVGR 319
Query: 207 NEYGQLGTGDTQPR-SQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLG 265
EYG+LG GD + +P V+ L+ +V + G S A+T DG++Y WG G + +LG
Sbjct: 320 PEYGRLGLGDVKDVVEKPTIVKKLTE-KIVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLG 378
Query: 266 FGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTR 303
GD D + + G+ ++ S GG H++ L +
Sbjct: 379 VGDGDDELEPIVVVSKNTQGKHMLLASGGGQHAIFLVK 416
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 73/139 (52%), Gaps = 10/139 (7%)
Query: 199 GALWAWGNNEYGQLGTG-DTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWG 257
G + GN + GQLG G D R + PV G+ VDI+AGG H+ LT G++Y +G
Sbjct: 42 GNVLVCGNGDVGQLGLGEDILERKRLSPVAGIP--DAVDISAGGMHNLVLTKSGDIYSFG 99
Query: 258 RGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFG--RGDH 315
+ G LG ++ S+ P ++ L G+ + +S G +HS L DG +F++G R H
Sbjct: 100 CNDEGALGRDTSEDGSESKPDLID-LPGKALC-ISAGDSHSACLLEDGRVFAWGSFRDSH 157
Query: 316 GRLGY---GRKVTTGQPME 331
G +G G K T ME
Sbjct: 158 GNMGLTIDGNKRTPIDLME 176
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 168/409 (41%), Gaps = 68/409 (16%)
Query: 6 SIIAWGSGEDGQLGIGNN-EEREWVCVVKALEPYKVRSVVAGSRNSLAI----------C 54
+++ G+G+ GQLG+G + ER+ + V + P V + AG ++L + C
Sbjct: 43 NVLVCGNGDVGQLGLGEDILERKRLSPVAGI-PDAV-DISAGGMHNLVLTKSGDIYSFGC 100
Query: 55 DD--------GKTKTENIPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGG--NEYG 104
+D + +E+ P ++ + A CL D GR +AWG + +G
Sbjct: 101 NDEGALGRDTSEDGSESKPDLIDLPGKALCISAGDSHSACLLED--GRVFAWGSFRDSHG 158
Query: 105 QCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG--QPW 162
G + T L V C+ +A+G H V+LT G V+T G +
Sbjct: 159 NMGLTIDGNKRTPIDLMEGTVC---CS-------IASGADHLVILTTAGKVFTVGCAEQG 208
Query: 163 PPGDIKQISV-------------PVRVQGLEQVKLIAVGAFHNLALQEDG---ALWAWGN 206
G + + S+ P ++ A+ A + + +WA G
Sbjct: 209 QLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGL 268
Query: 207 NEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTA-LTDDGEVYGWGRGEHGRLG 265
N + QL P++ + L + AGG H T LT D + GR E+GRLG
Sbjct: 269 NNFKQLAHETKGKEFALTPIK--TELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLG 326
Query: 266 FGDNDKSSKMVPQKVNLLAGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVT 325
GD K P V L E IV V CG S A+T DG ++S+G G + +LG G
Sbjct: 327 LGDV-KDVVEKPTIVKKLT-EKIVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVG---- 380
Query: 326 TGQPMEVPINIPAPRNAGDGVDRRWIAKLVACGGRHTLAIVEWQTEESK 374
G PI + + G + L + GG+H + +V+ ++ K
Sbjct: 381 DGDDELEPIVVVSKNTQGKHM------LLASGGGQHAIFLVKADKQDQK 423
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.136 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 158,716,340
Number of Sequences: 539616
Number of extensions: 7330986
Number of successful extensions: 15481
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 13542
Number of HSP's gapped (non-prelim): 567
length of query: 374
length of database: 191,569,459
effective HSP length: 119
effective length of query: 255
effective length of database: 127,355,155
effective search space: 32475564525
effective search space used: 32475564525
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)