BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>038616
MSFNFNSFNSQPNFGFNSSRALPNFGSNFHNDNGQGFDFNYSNVGQNHVNYGQNELIPQR
NSQPTIGAGQLGLSQRVSDVIRRNNFSPSYPRRVQVQSVIDYYPVENQPGVAEVAVTEVV
KTKFLTSSASTRDRILAPNDHMISSSHQQPFLRNRNFLLSNQPNQLSDQNYESIYDSPSF
LQNWSQNPLTTQNNNEQPFHNTFQNTTQNKSMSPSSTMSSQVNNSFPDNNDVPAQNILNQ
NPRQHQPNNLPVAKHDCEEILDPEPLSVLAPQSQNPSHDHDLVGDLIYAPRKMSEESSDD
EDEDEEGDGVIHSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHYRFETAAERKKRLAA
KYKKKNILRMARSSNGSLTIVHGRSFKNIADWRRKEKRAAVKIEDGDDQVQKQGEDGLTI
GGIAVKEEALA

High Scoring Gene Products

Symbol, full name Information P value
AT2G18490 protein from Arabidopsis thaliana 6.9e-10
AT2G15740 protein from Arabidopsis thaliana 4.9e-09
AT5G42640 protein from Arabidopsis thaliana 8.1e-08
AT5G22990 protein from Arabidopsis thaliana 4.3e-07
gtaN
GATA zinc finger domain-containing protein 14
gene from Dictyostelium discoideum 0.00071

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  038616
        (431 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2046318 - symbol:AT2G18490 "AT2G18490" species...   137  6.9e-10   3
TAIR|locus:2053598 - symbol:AT2G15740 "AT2G15740" species...   128  4.9e-09   3
TAIR|locus:2163857 - symbol:AT5G42640 "AT5G42640" species...   118  8.1e-08   2
TAIR|locus:2172716 - symbol:AT5G22990 "AT5G22990" species...   135  4.3e-07   2
DICTYBASE|DDB_G0287057 - symbol:gtaN "GATA zinc finger do...   112  0.00071   2


>TAIR|locus:2046318 [details] [associations]
            symbol:AT2G18490 "AT2G18490" species:3702 "Arabidopsis
            thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=TAS] InterPro:IPR007087 InterPro:IPR015880
            PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355 EMBL:CP002685
            GO:GO:0008270 GO:GO:0003700 GO:GO:0005622 EMBL:AC006135
            ProtClustDB:CLSN2683049 EMBL:AB493552 IPI:IPI00531928 PIR:H84564
            RefSeq:NP_179439.1 UniGene:At.52807 PRIDE:Q9ZU64
            EnsemblPlants:AT2G18490.1 GeneID:816364 KEGG:ath:AT2G18490
            TAIR:At2g18490 InParanoid:Q9ZU64 OMA:YGESQKI PhylomeDB:Q9ZU64
            ArrayExpress:Q9ZU64 Genevestigator:Q9ZU64 Uniprot:Q9ZU64
        Length = 251

 Score = 137 (53.3 bits), Expect = 6.9e-10, Sum P(3) = 6.9e-10
 Identities = 27/40 (67%), Positives = 30/40 (75%)

Query:   311 IHSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHYRFET 350
             IHSL  KKYGPY CPKC   F TSQ FAAH++S HY+ ET
Sbjct:   158 IHSLPYKKYGPYTCPKCNSIFDTSQKFAAHMSS-HYKSET 196

 Score = 58 (25.5 bits), Expect = 6.9e-10, Sum P(3) = 6.9e-10
 Identities = 18/35 (51%), Positives = 22/35 (62%)

Query:   241 NPRQHQPNNLPVAKHDCEEILDPEPLSVLAPQSQN 275
             NP  + PN L   K  CE IL+PEPL+V+ P  QN
Sbjct:    66 NPVFYPPNFL--GKQ-CE-ILNPEPLNVIFPH-QN 95

 Score = 37 (18.1 bits), Expect = 6.9e-10, Sum P(3) = 6.9e-10
 Identities = 6/18 (33%), Positives = 10/18 (55%)

Query:    92 RRVQVQSVIDYYPVENQP 109
             R +   S  DY P+++ P
Sbjct:     3 RNIDYVSSTDYLPIKDNP 20


>TAIR|locus:2053598 [details] [associations]
            symbol:AT2G15740 "AT2G15740" species:3702 "Arabidopsis
            thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=TAS] InterPro:IPR007087 InterPro:IPR015880
            PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0008270 GO:GO:0003700 GO:GO:0005622
            EMBL:AC006248 HOGENOM:HOG000152437 ProtClustDB:CLSN2683049
            EMBL:AB493548 IPI:IPI00524627 PIR:G84532 RefSeq:NP_179176.1
            UniGene:At.66204 ProteinModelPortal:Q9ZQE0 SMR:Q9ZQE0
            EnsemblPlants:AT2G15740.1 GeneID:816068 KEGG:ath:AT2G15740
            TAIR:At2g15740 eggNOG:NOG265797 InParanoid:Q9ZQE0 OMA:SHYKNET
            PhylomeDB:Q9ZQE0 ArrayExpress:Q9ZQE0 Genevestigator:Q9ZQE0
            Uniprot:Q9ZQE0
        Length = 329

 Score = 128 (50.1 bits), Expect = 4.9e-09, Sum P(3) = 4.9e-09
 Identities = 25/39 (64%), Positives = 29/39 (74%)

Query:   312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHYRFET 350
             HSL  +KYGPY CPKC   F TSQ FAAH++S HY+ ET
Sbjct:   234 HSLPYEKYGPYTCPKCNGVFNTSQKFAAHMSS-HYKNET 271

 Score = 56 (24.8 bits), Expect = 4.9e-09, Sum P(3) = 4.9e-09
 Identities = 19/50 (38%), Positives = 25/50 (50%)

Query:   233 PAQNILNQNPRQHQPNNLPVAKHDCEEILDPEPLSVLAPQSQNPSHDHDL 282
             P  NI N  P    PN        CE  L+P+PL+V+ P SQN ++   L
Sbjct:   135 PKTNIWN--PIFSPPNTFD---KQCE-FLNPKPLNVIFP-SQNSAYPQHL 177

 Score = 51 (23.0 bits), Expect = 4.9e-09, Sum P(3) = 4.9e-09
 Identities = 15/42 (35%), Positives = 20/42 (47%)

Query:   139 NDHMISSSHQQPFLRNRNFLLSNQPNQLSDQNYESIYDSPSF 180
             N H  SSS         N ++    N +SD NY SI ++P F
Sbjct:    58 NSHASSSSFGFQNSHVENHMMKR--NIISDDNYFSITNNPHF 97

 Score = 44 (20.5 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
 Identities = 10/28 (35%), Positives = 15/28 (53%)

Query:    23 PNFGSNFHNDNGQGFDFNYSNVG-QNHV 49
             P+F S FHN +     F + N   +NH+
Sbjct:    51 PSF-SCFHNSHASSSSFGFQNSHVENHM 77


>TAIR|locus:2163857 [details] [associations]
            symbol:AT5G42640 "AT5G42640" species:3702 "Arabidopsis
            thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=TAS] InterPro:IPR007087 InterPro:IPR015880
            PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0008270 GO:GO:0003700 GO:GO:0005622
            EMBL:AB013391 HOGENOM:HOG000152437 ProtClustDB:CLSN2683049
            IPI:IPI00526950 RefSeq:NP_199078.1 UniGene:At.55321
            EnsemblPlants:AT5G42640.1 GeneID:834272 KEGG:ath:AT5G42640
            TAIR:At5g42640 eggNOG:NOG327151 InParanoid:Q9FJV4 OMA:NIVFPHQ
            PhylomeDB:Q9FJV4 Genevestigator:Q9FJV4 Uniprot:Q9FJV4
        Length = 300

 Score = 118 (46.6 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
 Identities = 24/39 (61%), Positives = 26/39 (66%)

Query:   312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHYRFET 350
             HSL   KYGPY CP+C   F TSQ FAAH+ S HY  ET
Sbjct:   233 HSLPYTKYGPYTCPRCNGVFDTSQKFAAHMLS-HYNNET 270

 Score = 71 (30.1 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
 Identities = 39/172 (22%), Positives = 69/172 (40%)

Query:   124 FLTSSAST-RDRILAPNDHMISSSHQQPFLRNRN--FLLSNQPNQLSDQNYESIYDSPSF 180
             F+TS     RD   +P      SS+Q   + + +  F  S+    +  +NY+S+  +  F
Sbjct:    37 FITSDRMNHRDLFSSPPSF---SSYQNSHISSSSVGFNNSHMTYHMLKRNYDSVSRADYF 93

Query:   181 LQNWSQNPLTTQNNNEQPFHNTFQNTTQNKXXXXXXXXXXQVNNSFPDNNDVPAQNILNQ 240
               +   +   TQ +  Q   N +     +           +V  +      +  +NI N 
Sbjct:    94 --STKDHSHFTQVSFTQTITNKYTTIVPSNIFDTVHYDIGRVKRA------IDFRNIWN- 144

Query:   241 NPRQHQPNNLPVAKHDCEEILDPEPLSVLAPQSQNPSHDHDLVGDLIYAPRK 292
              P+ H P         CE IL+P PL+++ P   +    H L  D+I++  K
Sbjct:   145 -PKSHLPKKF---NRQCE-ILNPTPLNIVFPHQDSADRQH-L--DIIFSSSK 188


>TAIR|locus:2172716 [details] [associations]
            symbol:AT5G22990 "AT5G22990" species:3702 "Arabidopsis
            thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=TAS] InterPro:IPR007087 InterPro:IPR015880
            PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0008270 GO:GO:0003700 GO:GO:0005622
            EMBL:AB005243 EMBL:AB026660 IPI:IPI00539123 RefSeq:NP_197690.1
            UniGene:At.65541 PaxDb:Q9FFA9 PRIDE:Q9FFA9 DNASU:832363
            EnsemblPlants:AT5G22990.1 GeneID:832363 KEGG:ath:AT5G22990
            TAIR:At5g22990 eggNOG:NOG260799 HOGENOM:HOG000152437
            InParanoid:Q9FFA9 OMA:HISSMHY PhylomeDB:Q9FFA9
            ProtClustDB:CLSN2683049 Genevestigator:Q9FFA9 Uniprot:Q9FFA9
        Length = 324

 Score = 135 (52.6 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
 Identities = 24/39 (61%), Positives = 29/39 (74%)

Query:   312 HSLSRKKYGPYICPKCIQEFLTSQSFAAHVASAHYRFET 350
             HSL  +KYGPY CPKC   F TSQ FAAH++S HY+ E+
Sbjct:   236 HSLPYEKYGPYTCPKCNSVFDTSQKFAAHISSMHYKNES 274

 Score = 46 (21.3 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
 Identities = 23/86 (26%), Positives = 34/86 (39%)

Query:   188 PLTTQNNNEQPFHNTFQNTTQNKXXXXXXXXXXQVNNSFPDNNDVPAQNILNQ-NPRQHQ 246
             P  TQN+N  P H +  + TQ               N     N+       N  NP  + 
Sbjct:    95 PCITQNSNN-P-HLSQISITQT--ITNSYSAIVPTYNLITSQNEYQRAKEPNIFNPPFYP 150

Query:   247 PNNLPV-AKHDCEEILDPEPLSVLAP 271
             PN +     + C+ IL+P PL+ + P
Sbjct:   151 PNFVDKNVGNQCQ-ILNPTPLNTIFP 175


>DICTYBASE|DDB_G0287057 [details] [associations]
            symbol:gtaN "GATA zinc finger domain-containing
            protein 14" species:44689 "Dictyostelium discoideum" [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0046872
            "metal ion binding" evidence=IEA] InterPro:IPR000679 Pfam:PF00320
            PROSITE:PS00344 PROSITE:PS50114 SMART:SM00401
            dictyBase:DDB_G0287057 GenomeReviews:CM000153_GR GO:GO:0046872
            GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 eggNOG:COG5641
            EMBL:AAFI02000096 HSSP:P17679 RefSeq:XP_637400.1
            ProteinModelPortal:Q54KX0 EnsemblProtists:DDB0220469 GeneID:8625931
            KEGG:ddi:DDB_G0287057 OMA:GANEDHL Uniprot:Q54KX0
        Length = 953

 Score = 112 (44.5 bits), Expect = 0.00072, Sum P(2) = 0.00071
 Identities = 37/140 (26%), Positives = 61/140 (43%)

Query:   139 NDHMISSSHQQPFLRNRNFLLSNQPNQLSDQ-NYESIYDSPSFLQNWSQNPLTTQNNNEQ 197
             N++  ++++ Q +  N N   +NQ NQ+ +Q N ++ Y+  +   N +QN     NNN+ 
Sbjct:   548 NNNNNNNNNNQNYNNNHNNQFNNQNNQIHNQSNNQNNYNQNNNHNNNNQN---NNNNNQN 604

Query:   198 PFHNTFQNTTQNKXXXXXXXXXXQVNNSFPDNNDVPAQNILNQNPRQHQPNNLPVAKHDC 257
               +N  QN   N             NN+          N  + +PR   PNN P+  +  
Sbjct:   605 NNNNNNQNNNNNNNNINNNNNNNNNNNNGNTGLSSSTNNSKHSSPRS-SPNNSPLNYNTN 663

Query:   258 EEILDPEPLSVLAPQSQNPS 277
             EE  +    S  +P S N S
Sbjct:   664 EEYYNSGSSSPSSPGSPNSS 683

 Score = 53 (23.7 bits), Expect = 0.00072, Sum P(2) = 0.00071
 Identities = 10/31 (32%), Positives = 19/31 (61%)

Query:    24 NFGSNFHNDNGQGFDFNYSNVGQNHVNYGQN 54
             N+G+N++ +N      N +N+  N+ N+ QN
Sbjct:   519 NYGNNYNPNNNYNNSNNPNNMNNNY-NHNQN 548


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.131   0.387    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      431       359   0.00081  117 3  11 23  0.44    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  604 (64 KB)
  Total size of DFA:  250 KB (2133 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  36.16u 0.12s 36.28t   Elapsed:  00:00:02
  Total cpu time:  36.16u 0.12s 36.28t   Elapsed:  00:00:02
  Start:  Sat May 11 15:49:57 2013   End:  Sat May 11 15:49:59 2013

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