BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038617
(484 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
pdb|1AD3|B Chain B, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
Length = 452
Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/450 (42%), Positives = 276/450 (61%), Gaps = 10/450 (2%)
Query: 8 IEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDE 67
I D + R+ F SG T+S+ +R QL AL ++ +N I AL DLGK+ +Y +E
Sbjct: 3 ISDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEE 62
Query: 68 IGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALE 127
+ + + + L W + + SEP GVVL+ AWN+P NL ++
Sbjct: 63 VAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQ 122
Query: 128 PLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQKWNK 187
P++GA+AAGN V+LKPSE++ A LA IP Y+D V GGV +LL+++++
Sbjct: 123 PMVGAVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPETTELLKERFDH 182
Query: 188 IFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASC 247
I +TGS VG IVM+AAAKHLTPVTLELGGK P +D D+ V +RI GKF +
Sbjct: 183 IMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVD---KDCDLDVACRRIAWGKFMN- 238
Query: 248 NGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLK 307
+GQ CV DYIL + ++E LK ++K FYGE+ K S+ RIIN+ HF+R++ L+
Sbjct: 239 SGQTCVAPDYILCDPSIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLID 298
Query: 308 DPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFI 367
+ VA HGG D+ + +I PTIL+D + +M EEIFGP++PI+ + +++E+I+FI
Sbjct: 299 NQKVA----HGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFI 354
Query: 368 NSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHG 427
N R KPLA+Y F+ +E K++++ TSSG + ND +V LPFGGVG SG+G YHG
Sbjct: 355 NQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHG 414
Query: 428 HYSFETFSHEKAIMQRSFFLE--LEPRYPP 455
SFETFSH ++ + +S E + RYPP
Sbjct: 415 KKSFETFSHRRSCLVKSLLNEEAHKARYPP 444
>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZA|B Chain B, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZB|A Chain A, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
pdb|3SZB|B Chain B, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
Length = 469
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/460 (42%), Positives = 283/460 (61%), Gaps = 18/460 (3%)
Query: 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPV 61
+ M +I + + R F SG T+ + +R QL AL L+Q+ E ++ AL DL K+
Sbjct: 14 GSHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEW 73
Query: 62 ETYRDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGE----VVSEPFGVVLICSA 117
Y +E+ + + +Y + L +W A + P+ P + + + SEP GVVL+
Sbjct: 74 NAYYEEVVYVLEEIEYMIQKLPEWAADE----PVEKTPQTQQDELYIHSEPLGVVLVIGT 129
Query: 118 WNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVC 177
WN+P NL ++P++GAIAAGN V+LKPSEL+ AS LA IP YLD V NGGV
Sbjct: 130 WNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYLDKDLYPVINGGVPET 189
Query: 178 EQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVK 237
+LL+++++ I +TGS VG I+M+AAAKHLTPVTLELGGK P +D D+ V +
Sbjct: 190 TELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVD---KNCDLDVACR 246
Query: 238 RIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEY 297
RI GKF + +GQ CV DYIL + ++E LK ++K+FYGE+ K S+ RII+
Sbjct: 247 RIAWGKFMN-SGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFYGEDAKKSRDYGRIISAR 305
Query: 298 HFERLRKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITL 357
HF+R+ L++ VA +GG D +I PTIL D + +M EEIFGP+LPI+ +
Sbjct: 306 HFQRVMGLIEGQKVA----YGGTGDAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCV 361
Query: 358 NNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGV 417
+++E+I+FIN R KPLA+Y F+ ++ K++++ TSSG + ND +V LPFGGV
Sbjct: 362 RSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGV 421
Query: 418 GQSGIGRYHGHYSFETFSHEKAIMQRSFFLE--LEPRYPP 455
G SG+G YHG SFETFSH ++ + R + L+ RYPP
Sbjct: 422 GNSGMGSYHGKKSFETFSHRRSCLVRPLMNDEGLKVRYPP 461
>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
Length = 457
Score = 282 bits (721), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 160/436 (36%), Positives = 243/436 (55%), Gaps = 11/436 (2%)
Query: 6 GEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYR 65
+I+ + + F + T V +RK L L E + +N++ ++ AL +DLGK
Sbjct: 28 AKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDL 87
Query: 66 DEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLA 125
EIG + +AL+ LD+W+AP P + P+ VV EP+GV I +N+P+NL
Sbjct: 88 AEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLT 147
Query: 126 LEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQKW 185
L PLIGAI GNT ++KPSE E ++ + + I + + V GG D LL +
Sbjct: 148 LTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFAPEYVAVIQGGRDENSHLLSLPF 207
Query: 186 NKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFA 245
+ IFFTGSP VG +VM AAAKHLTPV LELGGKCP I + D+ TV +++ GKF
Sbjct: 208 DFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLI---VLPDADLDQTVNQLMFGKFI 264
Query: 246 SCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKL 305
+ +GQ C+ DY+ V L+E L +K E P + S +++ E +RL L
Sbjct: 265 N-SGQTCIAPDYLYVHYSVKDALLERLVERVKT---ELP-EINSTGKLVTERQVQRLVSL 319
Query: 306 LKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIE 365
L+ ++ G D + T++ + +M+EE+FGPILP++ ++++ +I+
Sbjct: 320 LE--ATQGQVLVGSQADVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAID 377
Query: 366 FIN-SRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGR 424
+N PKPLA+Y F KD K I++ SG N ++ LPFGG+G SG+G
Sbjct: 378 QVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGE 437
Query: 425 YHGHYSFETFSHEKAI 440
YHGH+S+ TF+H+K++
Sbjct: 438 YHGHFSYLTFTHKKSV 453
>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
Length = 457
Score = 278 bits (711), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 159/436 (36%), Positives = 242/436 (55%), Gaps = 11/436 (2%)
Query: 6 GEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYR 65
+I+ + + F + T V +RK L L E + +N++ ++ AL +DLGK
Sbjct: 28 AKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDL 87
Query: 66 DEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLA 125
EIG + +AL+ LD+W+AP P + P+ VV EP+GV I +N+P+NL
Sbjct: 88 AEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLT 147
Query: 126 LEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQKW 185
L PLIGAI GNT ++KPSE E ++ + + I + + V GG D LL +
Sbjct: 148 LTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFAPEYVAVIQGGRDENSHLLSLPF 207
Query: 186 NKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFA 245
+ IFFTGSP VG +VM AAAKHLTPV LELGGKCP I + D+ TV +++ GKF
Sbjct: 208 DFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLI---VLPDADLDQTVNQLMFGKFI 264
Query: 246 SCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKL 305
+ +GQ + DY+ V L+E L +K E P + S +++ E +RL L
Sbjct: 265 N-SGQTXIAPDYLYVHYSVKDALLERLVERVKT---ELP-EINSTGKLVTERQVQRLVSL 319
Query: 306 LKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIE 365
L+ ++ G D + T++ + +M+EE+FGPILP++ ++++ +I+
Sbjct: 320 LE--ATQGQVLVGSQADVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAID 377
Query: 366 FIN-SRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGR 424
+N PKPLA+Y F KD K I++ SG N ++ LPFGG+G SG+G
Sbjct: 378 QVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGE 437
Query: 425 YHGHYSFETFSHEKAI 440
YHGH+S+ TF+H+K++
Sbjct: 438 YHGHFSYLTFTHKKSV 453
>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|C Chain C, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|D Chain D, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
Length = 496
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 135/452 (29%), Positives = 216/452 (47%), Gaps = 19/452 (4%)
Query: 2 AAAMGEIEDKLAELRQTFR--SGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKH 59
AA ++E + R+ FR + S A R LRA+ + + +D K D GK
Sbjct: 41 AATAEDVEVAVVAARRAFRRNNWSATSGAHRATYLRAIAAKITEKKDHFVKLETIDSGK- 99
Query: 60 PVETYRDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWN 119
P + +I + +Y + +K + L V+ +P GVV + S WN
Sbjct: 100 PFDEAVLDIDDVASCFEYFAGQAEALDGKQKAPVTLPMERFKSHVLRQPLGVVGLISPWN 159
Query: 120 FPINLALEPLIGAIAAGNTVMLKPSELA-VECASFLAETIPLYLDCKAIKVTNG-GVDVC 177
+P+ +A + A+AAG T +LKPSELA V C F + L + + G G D
Sbjct: 160 YPLLMATWKIAPALAAGCTAVLKPSELASVTCLEFGEVCNEVGLPPGVLNILTGLGPDAG 219
Query: 178 EQLLQQ-KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTV 236
L+ +KI FTGS GS VM++AA+ + PVTLELGGK P + + +DI V
Sbjct: 220 APLVSHPDVDKIAFTGSSATGSKVMASAAQLVKPVTLELGGKSPIV---VFEDVDIDKVV 276
Query: 237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIIN 295
+ I G F + NGQ+C +LV + AA ++ L K +P ++ + +I+
Sbjct: 277 EWTIFGCFWT-NGQICSATSRLLVHESIAAEFVDKLVKWTKNIKISDPFEEGCRLGPVIS 335
Query: 296 EYHFERLRKLLKDPLVADA-IVHGGLLD---KENLFIEPTILLDPPLDAEIMTEEIFGPI 351
+ ++++ K + A I++GG K+ +IEPTI+ D +I EE+FGP+
Sbjct: 336 KGQYDKIMKFISTAKSEGATILYGGSRPEHLKKGYYIEPTIVTDISTSMQIWKEEVFGPV 395
Query: 352 LPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDV 411
L + T ++ E+I N LA F+ D ++I G++ N Q C V
Sbjct: 396 LCVKTFSSEDEAIALANDTEYGLAAAVFSNDLERCERITKALEVGAVWVN---CSQPCFV 452
Query: 412 -LPFGGVGQSGIGRYHGHYSFETFSHEKAIMQ 442
P+GG+ +SG GR G + + + + K + Q
Sbjct: 453 QAPWGGIKRSGFGRELGEWGIQNYLNIKQVTQ 484
>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
pdb|3TY7|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
Length = 478
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 139/444 (31%), Positives = 200/444 (45%), Gaps = 37/444 (8%)
Query: 9 EDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPV---ETYR 65
+D E R T SV R+ L +++ ++ +D I +A+ +LG P+ E
Sbjct: 55 DDVYLEFRHT-------SVKERQALLDKIVKEYENRKDDIVQAITDELGA-PLSLSERVH 106
Query: 66 DEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLA 125
+ GL A A LD + ++R L VV E GV + + WNFP N
Sbjct: 107 YQXGLNHFVA--ARDALDNYEFEERRGDDL--------VVKEAIGVSGLITPWNFPTNQT 156
Query: 126 LEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAI-KVTNG-GVDVCEQLLQQ 183
L A AAG+ V+LKPSE A LAE K + + NG G V L +
Sbjct: 157 SLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEH 216
Query: 184 -KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGG 242
K FTGS GS + AAK V+LELGGK P I+ +DIK K G
Sbjct: 217 PKVRXXSFTGSGPTGSKIXEKAAKDFKKVSLELGGKSPYIV---LDDVDIKEAAKATTG- 272
Query: 243 KFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPK-DSKSISRIINEYHFER 301
K + GQVC +LV K + LK + NP+ D + II++ F++
Sbjct: 273 KVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQ 332
Query: 302 LRKLLKDPLVADA-IVHGGLLDKENL----FIEPTILLDPPLDAEIMTEEIFGPILPIIT 356
++ + + A + +GG E L F PTI ++ I EEIFGP+ +IT
Sbjct: 333 VQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQXTIAQEEIFGPVXSVIT 392
Query: 357 LNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGG 416
N++ E+I+ N LA Y KD+ ++ +G++ N+ + LPFGG
Sbjct: 393 YNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEAGRKPD---LPFGG 449
Query: 417 VGQSGIGRYHGHYSFETFSHEKAI 440
QSG+GR G Y E F K+I
Sbjct: 450 YKQSGLGREWGDYGIEEFLEVKSI 473
>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
pdb|3IWJ|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
Length = 503
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 124/456 (27%), Positives = 210/456 (46%), Gaps = 32/456 (7%)
Query: 11 KLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGL 70
K A R T S A R LRA+ + + + ++ K D GK P++ +I
Sbjct: 55 KTALTRNKGADWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGK-PLDEAAWDIDD 113
Query: 71 IKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLI 130
+ +Y +K A +K + L V+ EP GVV + + WN+P+ +A +
Sbjct: 114 VAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVA 173
Query: 131 GAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQL---------L 181
A+AAG +LKPSELA L E CK + + G +++ L
Sbjct: 174 PALAAGCAAILKPSELASLTCLELGEI------CKEVGLPPGVLNILTGLGPEAGAPLAT 227
Query: 182 QQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIG 241
+K+ FTGS GS +M+AAA+ + PV+LELGGK P + + +D+ + I
Sbjct: 228 HPDVDKVAFTGSSATGSKIMTAAAQLVKPVSLELGGKSPLV---VFEDVDLDKAAEWAIF 284
Query: 242 GKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFE 300
G F + NGQ+C +++ + A + + IK +P ++ + +++E +E
Sbjct: 285 GCFWT-NGQICSATSRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYE 343
Query: 301 RLRKLLKDPLVADAIVHGGLLDKENL----FIEPTILLDPPLDAEIMTEEIFGPILPIIT 356
++ K + + A + G E+L FIEPTI+ D + +I EE+FGP+L + T
Sbjct: 344 KILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKT 403
Query: 357 LNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLC-DVLPFG 415
+ +E+I+ N L + D +++ +G + N Q C P+G
Sbjct: 404 FSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVN---CSQPCFTQAPWG 460
Query: 416 GVGQSGIGRYHGHYSFETFSHEKAIMQRSFFLELEP 451
GV +SG GR G + + + K + Q ++ EP
Sbjct: 461 GVKRSGFGRELGEWGLDNYLSVKQVTQ---YISEEP 493
>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|B Chain B, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|C Chain C, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|D Chain D, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|E Chain E, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|F Chain F, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|G Chain G, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|H Chain H, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|I Chain I, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|J Chain J, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|K Chain K, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|L Chain L, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|M Chain M, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|N Chain N, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|O Chain O, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|P Chain P, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFH|Q Chain Q, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|R Chain R, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|S Chain S, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|T Chain T, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|U Chain U, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|V Chain V, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|W Chain W, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|X Chain X, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Y Chain Y, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Z Chain Z, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|1 Chain 1, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|2 Chain 2, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|3 Chain 3, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|4 Chain 4, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|5 Chain 5, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|6 Chain 6, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
Length = 484
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 188/421 (44%), Gaps = 26/421 (6%)
Query: 25 KSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDK 84
K+ R LR +L+ N D + L + GK P+ + EI YA S ++
Sbjct: 69 KTAKERAAILRRWFDLVIANSDDLALILTTEQGK-PLAEAKGEIA-------YAASFIE- 119
Query: 85 WMAPKKRRLPLLFFPASGE-----VVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTV 139
W A + +R+ P VV EP GV + WNFP + + A+AAG +
Sbjct: 120 WFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPI 179
Query: 140 MLKPSE---LAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQKWNKIFFTGSPRV 196
++KP+E + +FLAE + ++ + + E K+ FTGS V
Sbjct: 180 VVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAV 239
Query: 197 GSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVD 256
G ++M+ +A + +TLELGG P I+ D+ V+ I K+ + NGQ CV +
Sbjct: 240 GRLLMAQSAPTVKKLTLELGGNAPFIV---FDDADLDAAVEGAIASKYRN-NGQTCVCTN 295
Query: 257 YILVEKKFAATLIESLKTTIKKF-YGENPKDSKSISRIINEYHFERLRKLLKDPLVADA- 314
V ++ + L + K G + ++ +INE +++ + D L A
Sbjct: 296 RFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGAS 355
Query: 315 IVHGGLLDK-ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKP 373
++ GG + F EPT+L D ++ EE FGP+ P+ + +E + N
Sbjct: 356 LMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFG 415
Query: 374 LAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFET 433
LA Y +++D ++ G + N L+ +V PFGGV QSG+GR HY +
Sbjct: 416 LAAYLYSRDIGRVWRVAEALEYGMVGINTGLISN--EVAPFGGVKQSGLGREGSHYGIDD 473
Query: 434 F 434
+
Sbjct: 474 Y 474
>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
pdb|4I8P|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
Length = 520
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 169/351 (48%), Gaps = 28/351 (7%)
Query: 107 EPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKA 166
EP GVV + + WN+P+ +A + A+AAG T +LKPSELA LA+ CK
Sbjct: 167 EPIGVVGLITPWNYPLLMATWKIAPALAAGCTAVLKPSELASVTCLELADI------CKE 220
Query: 167 IKVTNGGVDVCEQL---------LQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGG 217
+ + +G +++ L +K+ FTGS G +M++AA + PVTLELGG
Sbjct: 221 VGLPSGVLNIVTGLGPDAGAPLSAHPDVDKVAFTGSFETGKKIMASAAPMVKPVTLELGG 280
Query: 218 KCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIK 277
K P + + +DI V+ + G F + NGQ+C +L+ K A E + K
Sbjct: 281 KSPIV---VFDDVDIDKAVEWTLFGCFWT-NGQICSATSRLLIHTKIAKKFNERMVAWAK 336
Query: 278 KFYGENP-KDSKSISRIINEYHFERLRKLLKDPLVADA-IVHGGLLD---KENLFIEPTI 332
+P ++ + +++E +E+++K + + A I+ GG+ ++ FIEPTI
Sbjct: 337 NIKVSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGGVRPAHLEKGFFIEPTI 396
Query: 333 LLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG 392
+ D EI EE+FGP+L + + E+IE N LA + D +++
Sbjct: 397 ITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEE 456
Query: 393 TSSGSLIFNDTLVQQLCDV-LPFGGVGQSGIGRYHGHYSFETFSHEKAIMQ 442
+G + N Q C P+GG +SG GR G + + K + +
Sbjct: 457 IDAGCIWVN---CSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTE 504
>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3RHD|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
Length = 486
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 132/432 (30%), Positives = 198/432 (45%), Gaps = 42/432 (9%)
Query: 27 VAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDE----IGLIKKSAKYALSCL 82
+ R N L + + +++ ++++ K L D GK P++ R E IG K +A Y
Sbjct: 55 ITKRYNILMNIAKQIKEKKEELAKILAIDAGK-PIKQARVEVERSIGTFKLAAFYVKEHR 113
Query: 83 DKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLK 142
D+ + R L+F EP G+V + +NFP+NL+ + AIA GN ++
Sbjct: 114 DEVIPSDDR---LIF------TRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHH 164
Query: 143 PSELA----VECASFLAETIPLY---LDCKAIKVTNGGVDVCEQLLQQKWNKIFFTGSPR 195
PS A +E A + + Y L + G V E ++ +K N I FTGS +
Sbjct: 165 PSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSK 224
Query: 196 VGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGV 255
VG ++ A + LELGG P I + D+ V +I G F GQVC+ V
Sbjct: 225 VGELITKKAG--FKKIALELGGVNPNI---VLKDADLNKAVNALIKGSFIYA-GQVCISV 278
Query: 256 DYILVEKKFAATLIESLKTTIKKFYGENPKDSKS-ISRIINEYHFERLRKLLKDPLVADA 314
ILV++ A IE K NP D K+ + +I+ H E + K +V A
Sbjct: 279 GMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEK-----VVEKA 333
Query: 315 IVHGGLL----DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSR 370
I GG L ++ PTI L+ D + E F P++PII N +E I+ NS
Sbjct: 334 IDEGGKLLLGGKRDKALFYPTI-LEVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANST 391
Query: 371 PKPLAIYAFTKDETFKKQIVSGTSSGSLIFND-TLVQQLCDVLPFGGVGQSGIGRYHGHY 429
L FT D + G ++ ND +L +Q D +PFGGV +SG+GR Y
Sbjct: 392 EYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQ--DNMPFGGVKKSGLGREGVKY 449
Query: 430 SFETFSHEKAIM 441
+ E S+ K I+
Sbjct: 450 AMEEMSNIKTII 461
>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 186/416 (44%), Gaps = 26/416 (6%)
Query: 30 RKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPK 89
R LR L+ +++D + + + + GK P+ + EI YA S ++ W A +
Sbjct: 71 RATILRNWFNLMMEHQDDLARLMTLEQGK-PLAEAKGEI-------SYAASFIE-WFAEE 121
Query: 90 KRRLPLLFFPASGE-----VVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPS 144
+R+ P V+ +P GV + WNFP + A+AAG T++LKP+
Sbjct: 122 GKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPA 181
Query: 145 ELAVECASFLAE-TIPLYLDCKAIKVTNGGVDVCEQLLQQK--WNKIFFTGSPRVGSIVM 201
A LAE I + V G L K+ FTGS +G +M
Sbjct: 182 SQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLM 241
Query: 202 SAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVE 261
AK + V+LELGG P I+ D+ V+ + KF + GQ CV + + V+
Sbjct: 242 EQCAKDIKKVSLELGGNAPFIV---FDDADLDKAVEGALASKFRNA-GQTCVCANRLYVQ 297
Query: 262 KKFAATLIESLKTTIKKFY-GENPKDSKSISRIINEYHFERLRKLLKDPLVADA-IVHGG 319
E L+ + K + G+ + +I +I+E ++ + + D L A +V GG
Sbjct: 298 DGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGG 357
Query: 320 -LLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYA 378
++ F +PTIL+D P +A++ EE FGP+ P+ + + I N LA Y
Sbjct: 358 KAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYF 417
Query: 379 FTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETF 434
+ +D + ++ G + N ++ +V PFGG+ SG+GR Y E +
Sbjct: 418 YARDLSRVFRVGEALEYGIVGINTGIISN--EVAPFGGIKASGLGREGSKYGIEDY 471
>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|B Chain B, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|D Chain D, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 186/416 (44%), Gaps = 26/416 (6%)
Query: 30 RKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPK 89
R LR L+ +++D + + + + GK P+ + EI YA S ++ W A +
Sbjct: 71 RATILRNWFNLMMEHQDDLARLMTLEQGK-PLAEAKGEI-------SYAASFIE-WFAEE 121
Query: 90 KRRLPLLFFPASGE-----VVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPS 144
+R+ P V+ +P GV + WNFP + A+AAG T++LKP+
Sbjct: 122 GKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPA 181
Query: 145 ELAVECASFLAE-TIPLYLDCKAIKVTNGGVDVCEQLLQQK--WNKIFFTGSPRVGSIVM 201
A LAE I + V G L K+ FTGS +G +M
Sbjct: 182 SQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLM 241
Query: 202 SAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVE 261
AK + V+LELGG P I+ D+ V+ + KF + GQ CV + + V+
Sbjct: 242 EQCAKDIKKVSLELGGNAPFIV---FDDADLDKAVEGALASKFRNA-GQTCVCANRLYVQ 297
Query: 262 KKFAATLIESLKTTIKKFY-GENPKDSKSISRIINEYHFERLRKLLKDPLVADA-IVHGG 319
E L+ + K + G+ + +I +I+E ++ + + D L A +V GG
Sbjct: 298 DGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGG 357
Query: 320 -LLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYA 378
++ F +PTIL+D P +A++ EE FGP+ P+ + + I N LA Y
Sbjct: 358 KAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYF 417
Query: 379 FTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETF 434
+ +D + ++ G + N ++ +V PFGG+ SG+GR Y E +
Sbjct: 418 YARDLSRVFRVGEALEYGIVGINTGIISN--EVAPFGGIKASGLGREGSKYGIEDY 471
>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3R31|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
Length = 517
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 162/342 (47%), Gaps = 16/342 (4%)
Query: 108 PFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAET-IPLYLDCKA 166
P GV + AWN+P +A A+ AGN ++ KPSE A +AE I L
Sbjct: 150 PLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGL 209
Query: 167 IKVTNGGVDVCEQLLQQ-KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDT 225
V G D L+ K+ TGS G V +AAA HL VT+ELGGK P I+
Sbjct: 210 FNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIV-- 267
Query: 226 LSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPK 285
DI+ V + G F S +GQVC + V+KK A +E+LK + +P
Sbjct: 268 -FDDADIESAVGGAMLGNFYS-SGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPL 325
Query: 286 D-SKSISRIINEYHFERLRKLLKDPLVADA--IVHGGLLDK---ENLFIEPTILLDPPLD 339
D + + ++++ E++ ++ A I GG+ + E +++PT+ D D
Sbjct: 326 DYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDD 385
Query: 340 AEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLI 399
I EEIFGP++ ++ ++ E + N+ LA FT D ++V G +G+L
Sbjct: 386 MTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLW 445
Query: 400 FNDTLVQQLCDV-LPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
N LC V +PFGG QSG GR + + E +S K +
Sbjct: 446 IN---TYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTV 484
>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|C Chain C, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|D Chain D, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|E Chain E, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|F Chain F, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|G Chain G, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|H Chain H, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|I Chain I, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|J Chain J, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|K Chain K, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|L Chain L, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
Length = 503
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 114/446 (25%), Positives = 203/446 (45%), Gaps = 27/446 (6%)
Query: 11 KLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGL 70
K A R+ R S + R LRA+ +++ +D++ K D GK P+E ++
Sbjct: 55 KRAISRKNGRDWSAASGSLRARYLRAIAAKIKEKKDELGKLESIDCGK-PLEEALADLDD 113
Query: 71 IKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLI 130
+ +Y ++ + +K + L ++ EP GVV + + WN+P +A +
Sbjct: 114 VVACFEYYAGLAEELDSKQKAPISLPMDTFKSYILKEPIGVVALITPWNYPFLMATWKIA 173
Query: 131 GAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQKW----- 185
A+AAG +LKPSELA L E CK + + G +++ L +
Sbjct: 174 PALAAGCAAILKPSELASVTCLELGEI------CKEVGLPRGVLNIVTGLGHEAGASLAS 227
Query: 186 ----NKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIG 241
+KI FTGS GS +M+ AA+ + PV+LELGGK P + + +D+ + +
Sbjct: 228 HPDVDKISFTGSSATGSKIMTTAAQLVKPVSLELGGKSPIV---VFEDVDLDKVAEWTVF 284
Query: 242 GKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFE 300
G F + NGQ+C ++V + A ++ L + +P ++ + I++E ++
Sbjct: 285 GCFFT-NGQICSATSRLIVHESIAVEFVDKLVKWAENIKISDPLEEGCRLGPIVSEAQYK 343
Query: 301 RLRKLLKDPLVADAIVHGGLLDKENL----FIEPTILLDPPLDAEIMTEEIFGPILPIIT 356
++ + A + G E+L F+EPTI+ D +I EE+FGP+L + T
Sbjct: 344 KVLNCISSAKSEGATILTGGRRPEHLKKGYFVEPTIITDVTTSMQIWREEVFGPVLAVKT 403
Query: 357 LNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGG 416
+ +E+I N L + D +++ +G + N Q P+GG
Sbjct: 404 FSTEEEAINLANDTHYGLGSAVMSNDLERCERLSKALQAGIVWIN--CAQPSFIQAPWGG 461
Query: 417 VGQSGIGRYHGHYSFETFSHEKAIMQ 442
+ +SG GR G + E + K + +
Sbjct: 462 IKRSGFGRELGEWGLENYLSVKQVTR 487
>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
pdb|4I9B|B Chain B, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
Length = 517
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 179/362 (49%), Gaps = 28/362 (7%)
Query: 104 VVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLD 163
V+ EP GVV + + WN+P+ +A+ + A+AAG +LKPSELA L E
Sbjct: 160 VLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAILKPSELASITCLELGEI------ 213
Query: 164 CKAIKVTNGGVDVCEQLLQQKW---------NKIFFTGSPRVGSIVMSAAAKHLTPVTLE 214
C+ I + +G +++ L + +KI FTGS GS +M+AAA+ + PV+LE
Sbjct: 214 CREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIMTAAAQLVKPVSLE 273
Query: 215 LGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKT 274
LGGK P ++ LDI + + G FA+ GQVC ++V++ A+ ++ L
Sbjct: 274 LGGKSPIVVFDDIDNLDI--AAEWTLFGIFAN-TGQVCSATSRLIVQENIASAFMDRLLK 330
Query: 275 TIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLVADA-IVHGGLLD---KENLFIE 329
K +P ++ + +++ +E++ K + + A I+ GG K+ +++
Sbjct: 331 WTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGERPQHLKKGYYVQ 390
Query: 330 PTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQI 389
PTI+ D EI EE+FGP+L + T +++IE N L +KD ++
Sbjct: 391 PTIITDVNTSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAAVMSKDVKRCERF 450
Query: 390 VSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSFFLEL 449
+G + N + Q + LP+GG +SG GR G + E F + I Q + +
Sbjct: 451 TKAFQTGIIWINCS--QPTFNELPWGGKKRSGFGRDLGKWGLENFLN---IKQVTEYTSA 505
Query: 450 EP 451
EP
Sbjct: 506 EP 507
>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a
Mutant From Solanum Lycopersicum (slamadh1-e260a)
Length = 514
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 178/362 (49%), Gaps = 28/362 (7%)
Query: 104 VVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLD 163
V+ EP GVV + + WN+P+ +A+ + A+AAG +LKPSELA L E
Sbjct: 160 VLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAILKPSELASITCLELGEI------ 213
Query: 164 CKAIKVTNGGVDVCEQLLQQKW---------NKIFFTGSPRVGSIVMSAAAKHLTPVTLE 214
C+ I + +G +++ L + +KI FTGS GS +M+AAA+ + PV+L
Sbjct: 214 CREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIMTAAAQLVKPVSLA 273
Query: 215 LGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKT 274
LGGK P ++ LDI + + G FA+ GQVC ++V++ A+ ++ L
Sbjct: 274 LGGKSPIVVFDDIDNLDI--AAEWTLFGIFAN-TGQVCSATSRLIVQENIASAFMDRLLK 330
Query: 275 TIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLVADA-IVHGGLLD---KENLFIE 329
K +P ++ + +++ +E++ K + + A I+ GG K+ +++
Sbjct: 331 WTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGERPQHLKKGYYVQ 390
Query: 330 PTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQI 389
PTI+ D EI EE+FGP+L + T +++IE N L +KD ++
Sbjct: 391 PTIITDVNTSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAAVMSKDVKRCERF 450
Query: 390 VSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSFFLEL 449
+G + N + Q + LP+GG +SG GR G + E F + I Q + +
Sbjct: 451 TKAFQTGIIWINCS--QPTFNELPWGGKKRSGFGRDLGKWGLENFLN---IKQVTEYTSA 505
Query: 450 EP 451
EP
Sbjct: 506 EP 507
>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|B Chain B, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|C Chain C, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|D Chain D, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|2EUH|A Chain A, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|B Chain B, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|C Chain C, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|D Chain D, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|1QI6|A Chain A, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|B Chain B, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|C Chain C, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|D Chain D, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
Length = 475
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 192/422 (45%), Gaps = 24/422 (5%)
Query: 30 RKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPK 89
R L + ++L +++KI L +++ K Y+ + + ++A+ ++ + +
Sbjct: 64 RAAYLHKVADILMRDKEKIGAILSKEVAKG----YKSAVSEVVRTAEIINYAAEEGLRME 119
Query: 90 KRRLPLLFFPASGE-----VVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPS 144
L F A+ + V EP G+VL S +N+P+NLA + A+ AGN + KP
Sbjct: 120 GEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPP 179
Query: 145 ELAVECASFLAETIPLYLDCKAI--KVTNGGVDVCEQLLQ-QKWNKIFFTGSPRVGSIVM 201
LAE + +T G ++ + +++ Q N I FTGS +G +
Sbjct: 180 TQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIG 239
Query: 202 SAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVE 261
A + P+ LELGGK AI + D+++T K II G F +GQ C V +LV
Sbjct: 240 KMAG--MRPIMLELGGKDSAI---VLEDADLELTAKNIIAGAFG-YSGQRCTAVKRVLVM 293
Query: 262 KKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDP--LVADAIVHGG 319
+ A L+E ++ + NP+D I+ +I+ + + L+ D A A+
Sbjct: 294 ESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTE-- 351
Query: 320 LLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAF 379
+ +E I P + D + EE FGP+LPII + +++E+IE N L F
Sbjct: 352 -IKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIF 410
Query: 380 TKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKA 439
T D I G++ N+ Q+ D PF G +SG G YS E + K+
Sbjct: 411 TNDFPRAFGIAEQLEVGTVHINNK-TQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKS 469
Query: 440 IM 441
++
Sbjct: 470 VV 471
>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|B Chain B, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|C Chain C, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|D Chain D, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
Length = 528
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 177/400 (44%), Gaps = 31/400 (7%)
Query: 55 DLGKHPVETYRDEIGLIKKSAKYALSCLDKW--MAPKKRRLPLLFFPASGE-----VVSE 107
++GK P+ R EIG C D W A + R L G+ V+ E
Sbjct: 112 EVGK-PIAQARGEIGF----------CADLWSYAAGQARALEGQTHNNIGDDRLGLVLRE 160
Query: 108 PFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAE-TIPLYLDCKA 166
P GVV I + WNFP +A E + AI +G TV+LKPSE + LAE +
Sbjct: 161 PVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGV 220
Query: 167 IKVTNGGVDVCEQLLQQKWN--KIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILD 224
V G D Q+L + N + FTGS RVG+ + AA+ + V LELGGK P I+
Sbjct: 221 FNVVTGYGDPAGQVLAEDPNVDXVAFTGSVRVGTKLGEIAARTVKRVGLELGGKGPQIVF 280
Query: 225 TLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKF-YGEN 283
+ + G + + GQ C+ +LV++ L E L +K +G+
Sbjct: 281 ADADLDAAADGIAY---GVYHNA-GQCCISGSRLLVQEGIRDALXERLLDISRKVAFGDP 336
Query: 284 PKDSKSISRIINEYHFERLRKLLKDPLVADA--IVHGGLLDKE-NLFIEPTILLDPPLDA 340
+ I I+E H E++ + + + A ++ G + +E L+ PT+ D
Sbjct: 337 LNERTKIGAXISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDX 396
Query: 341 EIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIF 400
I EEIFGP+L +T E++ N+ L+ ++ + Q + +G
Sbjct: 397 SIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWI 456
Query: 401 NDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
N + LP GG +SG+GR G Y F+ +S K +
Sbjct: 457 NSVI--DGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGV 494
>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|B Chain B, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|C Chain C, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|D Chain D, Gapn T244s Mutant X-Ray Structure At 2.5 A
Length = 475
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 192/422 (45%), Gaps = 24/422 (5%)
Query: 30 RKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPK 89
R L + ++L +++KI L +++ K Y+ + + ++A+ ++ + +
Sbjct: 64 RAAYLHKVADILMRDKEKIGAILSKEVAKG----YKSAVSEVVRTAEIINYAAEEGLRME 119
Query: 90 KRRLPLLFFPASGE-----VVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPS 144
L F A+ + V EP G+VL S +N+P+NLA + A+ AGN + KP
Sbjct: 120 GEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPP 179
Query: 145 ELAVECASFLAETIPLYLDCKAI--KVTNGGVDVCEQLLQ-QKWNKIFFTGSPRVGSIVM 201
LAE + +T G ++ + +++ Q N I F+GS +G +
Sbjct: 180 TQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFSGSTGIGERIG 239
Query: 202 SAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVE 261
A + P+ LELGGK AI + D+++T K II G F +GQ C V +LV
Sbjct: 240 KMAG--MRPIMLELGGKDSAI---VLEDADLELTAKNIIAGAFG-YSGQRCTAVKRVLVM 293
Query: 262 KKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDP--LVADAIVHGG 319
+ A L+E ++ + NP+D I+ +I+ + + L+ D A A+
Sbjct: 294 ESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTE-- 351
Query: 320 LLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAF 379
+ +E I P + D + EE FGP+LPII + +++E+IE N L F
Sbjct: 352 -IKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIF 410
Query: 380 TKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKA 439
T D I G++ N+ Q+ D PF G +SG G YS E + K+
Sbjct: 411 TNDFPRAFGIAEQLEVGTVHINNK-TQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKS 469
Query: 440 IM 441
++
Sbjct: 470 VV 471
>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|B Chain B, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|C Chain C, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|D Chain D, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2QE0|A Chain A, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|B Chain B, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|C Chain C, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|D Chain D, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement
Length = 475
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 191/422 (45%), Gaps = 24/422 (5%)
Query: 30 RKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPK 89
R L + ++L +++KI L +++ K Y+ + + ++A+ ++ + +
Sbjct: 64 RAAYLHKVADILMRDKEKIGAILSKEVAKG----YKSAVSEVVRTAEIINYAAEEGLRME 119
Query: 90 KRRLPLLFFPASGE-----VVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPS 144
L F A+ + V EP G+VL S +N+P+NLA + A+ AGN + KP
Sbjct: 120 GEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPP 179
Query: 145 ELAVECASFLAETIPLYLDCKAI--KVTNGGVDVCEQLLQ-QKWNKIFFTGSPRVGSIVM 201
LAE + +T G ++ + +++ Q N I FTGS +G +
Sbjct: 180 TQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIG 239
Query: 202 SAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVE 261
A + P+ L LGGK AI + D+++T K II G F +GQ C V +LV
Sbjct: 240 KMAG--MRPIMLALGGKDSAI---VLEDADLELTAKNIIAGAFG-YSGQRCTAVKRVLVM 293
Query: 262 KKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDP--LVADAIVHGG 319
+ A L+E ++ + NP+D I+ +I+ + + L+ D A A+
Sbjct: 294 ESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTE-- 351
Query: 320 LLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAF 379
+ +E I P + D + EE FGP+LPII + +++E+IE N L F
Sbjct: 352 -IKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIF 410
Query: 380 TKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKA 439
T D I G++ N+ Q+ D PF G +SG G YS E + K+
Sbjct: 411 TNDFPRAFGIAEQLEVGTVHINNK-TQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKS 469
Query: 440 IM 441
++
Sbjct: 470 VV 471
>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh
pdb|2W8O|A Chain A, The Crystal Structure Of The Reduced Form Of Human Ssadh
Length = 487
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/423 (28%), Positives = 196/423 (46%), Gaps = 36/423 (8%)
Query: 30 RKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPK 89
R + LR L+ N+D + + + + GK P++ EI Y+ L+ W + +
Sbjct: 72 RSSLLRKWYNLMIQNKDDLARIITAESGK-PLKEAHGEI-------LYSAFFLE-WFSEE 122
Query: 90 KRRL--PLLFFPASGE---VVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPS 144
RR+ ++ PA V+ +P GV + + WNFP + + A+AAG TV++KP+
Sbjct: 123 ARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPA 182
Query: 145 ELAVECASFLAE-----TIP--LY--LDCKAIKVTNGGVDVCEQLLQQKWNKIFFTGSPR 195
E A LAE IP +Y + C G +C L +KI FTGS
Sbjct: 183 EDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLV---SKISFTGSTT 239
Query: 196 VGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGV 255
G I++ AA + V++ELGG P I+ ++ V + KF + GQ CV
Sbjct: 240 TGKILLHHAANSVKRVSMELGGLAPFIV---FDSANVDQAVAGAMASKFRN-TGQTCVCS 295
Query: 256 DYILVEKKFAATLIESLKTTIKK--FYGENPKDSKSISRIINEYHFERLRKLLKDPLVAD 313
+ LV++ +++ +KK G ++ + +INE E++ K + D +
Sbjct: 296 NQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKG 355
Query: 314 A-IVHGGLLDK-ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRP 371
A +V GG + F EPT+L + D EE FGP+ P+I + +E+I N+
Sbjct: 356 ATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAAD 415
Query: 372 KPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSF 431
LA Y +++D ++ G + N+ L+ + PFGGV QSG+GR Y
Sbjct: 416 VGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSV--ECPFGGVKQSGLGREGSKYGI 473
Query: 432 ETF 434
+ +
Sbjct: 474 DEY 476
>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3RHH|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
Length = 505
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 161/341 (47%), Gaps = 17/341 (4%)
Query: 104 VVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLD 163
V EP GVVL S +N+P+NLA + A+ GNTV+ KP+ + E + D
Sbjct: 148 VEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALA---D 204
Query: 164 CKA----IKVTNG-GVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGK 218
A I+V G G + + L++ + +S AK + PV LELGGK
Sbjct: 205 AGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKAK-MIPVVLELGGK 263
Query: 219 CPAI-LDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIK 277
PAI LD D+K+T +I+ G F S +GQ C + + V+ A L+ ++K ++
Sbjct: 264 DPAIVLDD----ADLKLTASQIVSGAF-SYSGQRCTAIKRVFVQDSVADQLVANIKELVE 318
Query: 278 KFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPP 337
+ +P+D I+ +I+E ++ L+ D L A + G + NL + PT+L D
Sbjct: 319 QLTVGSPEDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKRQGNL-LSPTLLDDVT 377
Query: 338 LDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGS 397
+ EE FGP+LPII + + E+I N L FTKD I G+
Sbjct: 378 PAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGT 437
Query: 398 LIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEK 438
+ N ++ D PF GV +SG+G S + + E+
Sbjct: 438 VHIN-AKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRER 477
>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|B Chain B, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|C Chain C, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|D Chain D, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|E Chain E, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|F Chain F, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|G Chain G, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|H Chain H, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
Length = 497
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 161/345 (46%), Gaps = 20/345 (5%)
Query: 108 PFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSE---LAVECASFLAETIPLYLDC 164
P GVV+ +AWNFP+ LA + A+ GNT++LKP++ LA +A+ L
Sbjct: 148 PRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGL--PD 205
Query: 165 KAIKVTNGGVDVCEQLLQQK--WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAI 222
+ V NG V Q L + I TGS G + +A+++TPV LELGGK P +
Sbjct: 206 GVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLELGGKAPMV 265
Query: 223 LDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGE 282
+ D+ + + G+FA+C GQVC V+ + V + +K
Sbjct: 266 V---MDDADLDKAAEDALWGRFANC-GQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVG 321
Query: 283 NPKDSKS-ISRIINEYHFERLRKLLKDPLVADAIVHGGLLD------KENLFIEPTILLD 335
+P D+ S + N+ + + ++ + + A V G + + EPT+L+D
Sbjct: 322 DPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVD 381
Query: 336 PPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS 395
D ++ EE FGPILPI+ +++++++IEF N L+ Y T+ Q +S
Sbjct: 382 VKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEV 441
Query: 396 GSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
G + N + +Q G QSG G G + E + +K +
Sbjct: 442 GEVYINRGMGEQHQGF--HNGWKQSGFGGEDGKFGLEQYLEKKTV 484
>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|C Chain C, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|D Chain D, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|E Chain E, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|F Chain F, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|G Chain G, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|H Chain H, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
Length = 504
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 190/426 (44%), Gaps = 26/426 (6%)
Query: 25 KSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDK 84
K+ R LR +L+ N D I + + GK P+ R E+ YA S ++
Sbjct: 89 KTAKERAGILRKWFDLIIANADDIALIMTSEQGK-PLAEARGEV-------LYAASFIE- 139
Query: 85 WMAPKKRRLPLLFFPA--SGE---VVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTV 139
W A + +R+ PA +G+ V+ +P GV + WNFP + A+AAG T+
Sbjct: 140 WFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTM 199
Query: 140 MLKPSELAVECA---SFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQKW-NKIFFTGSPR 195
+++P++L A LAE + I VT ++ +L K+ FTGS
Sbjct: 200 IVRPADLTPLTALALGVLAEKAGIPAGVLQI-VTGKAREIGAELTSNDTVRKLSFTGSTE 258
Query: 196 VGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGV 255
VG ++M+ A + ++LELGG P I+ + + V + K+ + GQ CV
Sbjct: 259 VGRLLMAQCAPTIKRISLELGGNAPFIVFDDAD---LDAAVDGAMVSKYRNA-GQTCVCA 314
Query: 256 DYILVEKKFAATLIESLKTTIKKF-YGENPKDSKSISRIINEYHFERLRKLLKDPLVADA 314
+ I V++ E L +K+ G + I +I E +++ ++D + A
Sbjct: 315 NRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGA 374
Query: 315 IVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPL 374
+ G + LF EP IL D + EE FGP+ P+ + +E I N L
Sbjct: 375 KLITGGKELGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGL 434
Query: 375 AIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETF 434
A Y +T++ + ++ G + N L+ +V PFGGV QSG+GR Y E +
Sbjct: 435 AAYFYTENFSRAIRVSEALEYGMVGHNTGLISN--EVAPFGGVKQSGLGREGSKYGIEEY 492
Query: 435 SHEKAI 440
K I
Sbjct: 493 LETKYI 498
>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|B Chain B, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|C Chain C, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|D Chain D, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
Length = 501
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 203/459 (44%), Gaps = 50/459 (10%)
Query: 7 EIEDKLAELRQTFRSGI---TKSVAWRKNQLRALIELLQDNEDKIFKALHQDL--GKHPV 61
+++ + RQ F+ G T + R L L +L++ D++ A + + GK
Sbjct: 59 DVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIE--RDRLLLATMEAMNGGKLFS 116
Query: 62 ETYRDEIGLIKKSAKYALSCLDKWMAPKKRRLPL--LFFPASGEVVSEPFGVVLICSAWN 119
Y ++G K+ +Y DK R +P+ FF + SEP GV WN
Sbjct: 117 NAYLMDLGGCIKTLRYCAGWADKIQG---RTIPMDGNFFTYT---RSEPVGVCGQIIPWN 170
Query: 120 FPINLALEPLIGAIAAGNTVMLKPSE----LAVECASFLAET---------IPLYLDCKA 166
FP+ + L + A++ GNTV++KP+E A+ S + E +P Y
Sbjct: 171 FPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAG 230
Query: 167 IKVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAK-HLTPVTLELGGKCPAILDT 225
+++ +DV +K+ FTGS VG ++ AA K +L V+LELGGK P I+
Sbjct: 231 AAISSH-MDV---------DKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIV-- 278
Query: 226 LSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP- 284
+ D+ V+ G F GQ C+ + VE+ + KK+ NP
Sbjct: 279 -FADADLDNAVEFAHQGVFYH-QGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPL 336
Query: 285 KDSKSISRIINEYHFERLRKLLKDPLVADAIVH--GGLLDKENLFIEPTILLDPPLDAEI 342
S I++ +E++ L++ A + GG + FI+PT+ D D I
Sbjct: 337 TPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRI 396
Query: 343 MTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFN- 401
EEIFGP+ I+ ++ + I+ N+ L+ FT D + S SG++ N
Sbjct: 397 AKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNC 456
Query: 402 DTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
++V C PFGG SG GR G Y F ++ K +
Sbjct: 457 YSVVSAQC---PFGGFKMSGNGRELGEYGFHEYTEVKTV 492
>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|B Chain B, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|C Chain C, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|D Chain D, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
Length = 475
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 191/422 (45%), Gaps = 24/422 (5%)
Query: 30 RKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPK 89
R L + ++L +++KI L +++ K Y+ + + ++A+ ++ + +
Sbjct: 64 RAAYLHKVADILMRDKEKIGAILSKEVAKG----YKSAVSEVVRTAEIINYAAEEGLRME 119
Query: 90 KRRLPLLFFPASGE-----VVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPS 144
L F A+ + V EP G+VL S +N+P+NLA + A+ AGN + KP
Sbjct: 120 GEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPP 179
Query: 145 ELAVECASFLAETIPLYLDCKAI--KVTNGGVDVCEQLLQ-QKWNKIFFTGSPRVGSIVM 201
LAE + +T G ++ + +++ Q N I FTGS +G +
Sbjct: 180 TQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIG 239
Query: 202 SAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVE 261
A + P+ LELGGK AI + D+++T K II G F +GQ V +LV
Sbjct: 240 KMAG--MRPIMLELGGKDSAI---VLEDADLELTAKNIIAGAFG-YSGQRSTAVKRVLVM 293
Query: 262 KKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDP--LVADAIVHGG 319
+ A L+E ++ + NP+D I+ +I+ + + L+ D A A+
Sbjct: 294 ESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTE-- 351
Query: 320 LLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAF 379
+ +E I P + D + EE FGP+LPII + +++E+IE N L F
Sbjct: 352 -IKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIF 410
Query: 380 TKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKA 439
T D I G++ N+ Q+ D PF G +SG G YS E + K+
Sbjct: 411 TNDFPRAFGIAEQLEVGTVHINNK-TQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKS 469
Query: 440 IM 441
++
Sbjct: 470 VV 471
>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3ED6|B Chain B, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3FG0|A Chain A, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|B Chain B, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|C Chain C, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|D Chain D, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|E Chain E, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|F Chain F, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|G Chain G, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|H Chain H, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
Length = 520
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 196/449 (43%), Gaps = 38/449 (8%)
Query: 16 RQTFRSG--ITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKK 73
R+ F SG ++ R ++RA+ + ++++ + + + D GK E+Y D + I
Sbjct: 80 RRAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESYAD-MDDIHN 138
Query: 74 SAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAI 133
Y DK + ++V EP GVV + WN+P+ A + A+
Sbjct: 139 VFMYFAGLADK---DGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPAL 195
Query: 134 AAGNTVMLKPSELA----------VECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQ 183
A G ++++KPSE+ +E F TI L L G +V + +
Sbjct: 196 ATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGA--------GSEVGDVMSGH 247
Query: 184 KW-NKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGG 242
K + + FTG G +M AA ++T + LELGGK P I+ D ++ V + + G
Sbjct: 248 KEVDLVSFTGGIETGKHIMKNAANNVTNIALELGGKNPNII---FDDADFELAVDQALNG 304
Query: 243 KFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKS-ISRIINEYHFER 301
+ GQVC ILV+ ++L +KK N D+ + + +I+ H +
Sbjct: 305 GYFHA-GQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNK 363
Query: 302 LRKLLKDPLVADAI--VHGGLLD----KENLFIEPTILLDPPLDAEIMTEEIFGPILPII 355
+ + A V G D K+ LF EPT++ + I+ EE+FGP++ +
Sbjct: 364 IESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVE 423
Query: 356 TLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFG 415
QE+I+ N LA F+KD +++ + G++ ND P+G
Sbjct: 424 GFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWIND--FHPYFAQAPWG 481
Query: 416 GVGQSGIGRYHGHYSFETFSHEKAIMQRS 444
G QSGIGR G E + K I+ +
Sbjct: 482 GYKQSGIGRELGKEGLEEYLVSKHILTNT 510
>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh
pdb|2W8Q|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Ssa.
pdb|2W8R|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Nad+
Length = 487
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 118/423 (27%), Positives = 195/423 (46%), Gaps = 36/423 (8%)
Query: 30 RKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPK 89
R + LR L+ N+D + + + + GK P++ EI Y+ L+ W + +
Sbjct: 72 RSSLLRKWYNLMIQNKDDLARIITAESGK-PLKEAHGEI-------LYSAFFLE-WFSEE 122
Query: 90 KRRL--PLLFFPASGE---VVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPS 144
RR+ ++ PA V+ +P GV + + WNFP + + A+AAG TV++KP+
Sbjct: 123 ARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPA 182
Query: 145 ELAVECASFLAE-----TIP--LY--LDCKAIKVTNGGVDVCEQLLQQKWNKIFFTGSPR 195
E A LAE IP +Y + C G +C L +KI FTGS
Sbjct: 183 EDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLV---SKISFTGSTT 239
Query: 196 VGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGV 255
G I++ AA + V++ELGG P I+ ++ V + KF + GQ V
Sbjct: 240 TGKILLHHAANSVKRVSMELGGLAPFIV---FDSANVDQAVAGAMASKFRN-TGQTAVCS 295
Query: 256 DYILVEKKFAATLIESLKTTIKK--FYGENPKDSKSISRIINEYHFERLRKLLKDPLVAD 313
+ LV++ +++ +KK G ++ + +INE E++ K + D +
Sbjct: 296 NQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKG 355
Query: 314 A-IVHGGLLDK-ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRP 371
A +V GG + F EPT+L + D EE FGP+ P+I + +E+I N+
Sbjct: 356 ATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAAD 415
Query: 372 KPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSF 431
LA Y +++D ++ G + N+ L+ + PFGGV QSG+GR Y
Sbjct: 416 VGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSV--ECPFGGVKQSGLGREGSKYGI 473
Query: 432 ETF 434
+ +
Sbjct: 474 DEY 476
>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde
Dehydrogenase Complexed With Nad+
Length = 495
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 120/424 (28%), Positives = 185/424 (43%), Gaps = 28/424 (6%)
Query: 30 RKNQLRALIELLQDNEDKIFKALHQDLGKHP--VET--YRDEIGLIKKSAKYALSCLDKW 85
R + A +++L + +D K L + G+ P +ET + +G + Y DK
Sbjct: 72 RAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMN----YFAGAADKV 127
Query: 86 MAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSE 145
+ R V EP GVV AWN P+ LA+ + A+ AG T++LKP+
Sbjct: 128 TWTETRTGSY----GQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAA 183
Query: 146 LAVECASFLAETIP-LYLDCKAIKVTNGGVDVCEQLLQQKWNKIF-FTGSPRVGSIVMSA 203
A+ LAE + L + V GG++ + L +F FTGS VG V
Sbjct: 184 ETPLTANALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRR 243
Query: 204 AAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKK 263
AA+ L P TLELGGK AI + +D+ + ++ + GQ CV IL +
Sbjct: 244 AAEMLKPCTLELGGKSAAI---ILEDVDLAAAIPMMVFSGVMNA-GQGCVNQTRILAPRS 299
Query: 264 FAATLIESLKTTIKKFYGENPKD-SKSISRIINEYHFERLRKLLKDPLVADA-IVHGG-- 319
++ ++ + P D + I +I+E R+ + + A +V GG
Sbjct: 300 RYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGR 359
Query: 320 --LLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIY 377
LD FI+PT+ D I EEIFGP+L II + +++I N LA
Sbjct: 360 PEGLDN-GFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGS 418
Query: 378 AFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHE 437
+T D +I +G+ N PFGG SGIGR +G E F+ +
Sbjct: 419 VWTTDVPKGIKISQQIRTGTYGINWYAFDPGS---PFGGYKNSGIGRENGPEGVEHFTQQ 475
Query: 438 KAIM 441
K+++
Sbjct: 476 KSVL 479
>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From
Escherichia Coli
Length = 479
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 154/343 (44%), Gaps = 13/343 (3%)
Query: 109 FGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAI- 167
GV WNFP L + A+ GNT+++KPSE A A+ + + +
Sbjct: 143 LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVF 202
Query: 168 -KVTNGGVDVCEQLLQQ-KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDT 225
V G V ++L K + TGS G +M+ AAK++T V LELGGK PAI+
Sbjct: 203 NLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIV-- 260
Query: 226 LSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPK 285
D+++ VK I+ + + +GQVC + + V+K + L ++ NP
Sbjct: 261 -MDDADLELAVKAIVDSRVIN-SGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPA 318
Query: 286 DSKSISR--IINEYHFERLRKLLKDPLVADAIVH--GGLLDKENLFIEPTILLDPPLDAE 341
+ I+ +IN ER+ + + + A V G ++ + + PT+LLD +
Sbjct: 319 ERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMS 378
Query: 342 IMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFN 401
IM EE FGP+LP++ + ++E+I N L +T++ + + G G N
Sbjct: 379 IMHEETFGPVLPVVAFDTLEEAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYIN 438
Query: 402 DTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444
+ + G +SGIG G + + + + +S
Sbjct: 439 RENFEAMQGF--HAGWRKSGIGGADGKHGLHEYLQTQVVYLQS 479
>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|B Chain B, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|C Chain C, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|D Chain D, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|E Chain E, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|F Chain F, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|G Chain G, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|H Chain H, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1NZX|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZZ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1O00|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O01|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O02|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|3INJ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3SZ9|A Chain A, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|B Chain B, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|C Chain C, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|D Chain D, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|E Chain E, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|F Chain F, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|G Chain G, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|H Chain H, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|4FQF|A Chain A, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|B Chain B, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|C Chain C, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|D Chain D, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
Length = 500
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 122/465 (26%), Positives = 194/465 (41%), Gaps = 53/465 (11%)
Query: 4 AMGEIEDKLAELRQTFRSGITKSVAWRK----------NQLRALIELLQDNEDKIFKALH 53
A G+ ED + + + R+ WR+ N+L LIE D+ + A
Sbjct: 52 AEGDKED-VDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIE-----RDRTYLAAL 105
Query: 54 Q--DLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVS----E 107
+ D GK V +Y ++ ++ K +Y DK+ P G+ S E
Sbjct: 106 ETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKT--------IPIDGDFFSYTRHE 157
Query: 108 PFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI------PLY 161
P GV WNFP+ + L A+A GN V++K +E A ++A I P
Sbjct: 158 PVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGV 217
Query: 162 LDCKAIKVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIV-MSAAAKHLTPVTLELGGKCP 220
++ G + + +K+ FTGS +G ++ ++A + +L VTLELGGK P
Sbjct: 218 VNIVPGFGPTAGAAIASH---EDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSP 274
Query: 221 AILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFY 280
I+ S D+ V++ F + GQ C V++ +E K
Sbjct: 275 NII---MSDADMDWAVEQAHFALFFN-QGQCCCAGSRTFVQEDIYDEFVERSVARAKSRV 330
Query: 281 GENPKDSKS-ISRIINEYHFERLRKLLKDPLVADA--IVHGGLLDKENLFIEPTILLDPP 337
NP DSK+ ++E F+++ + A + GG+ FI+PT+ D
Sbjct: 331 VGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQ 390
Query: 338 LDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGS 397
I EEIFGP++ I+ I+E + N+ LA FTKD + +G+
Sbjct: 391 DGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGT 450
Query: 398 LIFN--DTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
+ N D Q PFGG SG GR G Y + ++ K +
Sbjct: 451 VWVNCYDVFGAQ----SPFGGYKMSGSGRELGEYGLQAYTEVKTV 491
>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|2VLE|A Chain A, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|B Chain B, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|C Chain C, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|D Chain D, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|E Chain E, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|F Chain F, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|G Chain G, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|H Chain H, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
Length = 494
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 122/465 (26%), Positives = 194/465 (41%), Gaps = 53/465 (11%)
Query: 4 AMGEIEDKLAELRQTFRSGITKSVAWRK----------NQLRALIELLQDNEDKIFKALH 53
A G+ ED + + + R+ WR+ N+L LIE D+ + A
Sbjct: 46 AEGDKED-VDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIE-----RDRTYLAAL 99
Query: 54 Q--DLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVS----E 107
+ D GK V +Y ++ ++ K +Y DK+ P G+ S E
Sbjct: 100 ETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKT--------IPIDGDFFSYTRHE 151
Query: 108 PFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI------PLY 161
P GV WNFP+ + L A+A GN V++K +E A ++A I P
Sbjct: 152 PVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGV 211
Query: 162 LDCKAIKVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIV-MSAAAKHLTPVTLELGGKCP 220
++ G + + +K+ FTGS +G ++ ++A + +L VTLELGGK P
Sbjct: 212 VNIVPGFGPTAGAAIASH---EDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSP 268
Query: 221 AILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFY 280
I+ S D+ V++ F + GQ C V++ +E K
Sbjct: 269 NII---MSDADMDWAVEQAHFALFFN-QGQCCCAGSRTFVQEDIYDEFVERSVARAKSRV 324
Query: 281 GENPKDSKS-ISRIINEYHFERLRKLLKDPLVADA--IVHGGLLDKENLFIEPTILLDPP 337
NP DSK+ ++E F+++ + A + GG+ FI+PT+ D
Sbjct: 325 VGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQ 384
Query: 338 LDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGS 397
I EEIFGP++ I+ I+E + N+ LA FTKD + +G+
Sbjct: 385 DGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGT 444
Query: 398 LIFN--DTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
+ N D Q PFGG SG GR G Y + ++ K +
Sbjct: 445 VWVNCYDVFGAQ----SPFGGYKMSGSGRELGEYGLQAYTEVKTV 485
>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Ternary Complex With Product Bound (L)-Lactate
And Nadh.
pdb|2ILU|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Binary Complex With Nadph
Length = 479
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 154/343 (44%), Gaps = 13/343 (3%)
Query: 109 FGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAI- 167
GV WNFP L + A+ GNT+++KPSE A A+ + + +
Sbjct: 143 LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVF 202
Query: 168 -KVTNGGVDVCEQLLQQ-KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDT 225
V G V ++L K + TGS G +M+ AAK++T V LELGGK PAI+
Sbjct: 203 NLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVXLELGGKAPAIV-- 260
Query: 226 LSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPK 285
D+++ VK I+ + + +GQVC + + V+K + L ++ NP
Sbjct: 261 -MDDADLELAVKAIVDSRVIN-SGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPA 318
Query: 286 DSKSISR--IINEYHFERLRKLLKDPLVADAIVH--GGLLDKENLFIEPTILLDPPLDAE 341
+ I+ +IN ER+ + + + A V G ++ + + PT+LLD +
Sbjct: 319 ERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMS 378
Query: 342 IMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFN 401
IM EE FGP+LP++ + ++++I N L +T++ + + G G N
Sbjct: 379 IMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYIN 438
Query: 402 DTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444
+ + G +SGIG G + + + + +S
Sbjct: 439 RENFEAMQGF--HAGWRKSGIGGADGKHGLHEYLQTQVVYLQS 479
>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase
Length = 479
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 154/343 (44%), Gaps = 13/343 (3%)
Query: 109 FGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAI- 167
GV WNFP L + A+ GNT+++KPSE A A+ + + +
Sbjct: 143 LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVF 202
Query: 168 -KVTNGGVDVCEQLLQQ-KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDT 225
V G V ++L K + TGS G +M+ AAK++T V LELGGK PAI+
Sbjct: 203 NLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIV-- 260
Query: 226 LSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPK 285
D+++ VK I+ + + +GQVC + + V+K + L ++ NP
Sbjct: 261 -MDDADLELAVKAIVDSRVIN-SGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPA 318
Query: 286 DSKSISR--IINEYHFERLRKLLKDPLVADAIVH--GGLLDKENLFIEPTILLDPPLDAE 341
+ I+ +IN ER+ + + + A V G ++ + + PT+LLD +
Sbjct: 319 ERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMS 378
Query: 342 IMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFN 401
IM EE FGP+LP++ + ++++I N L +T++ + + G G N
Sbjct: 379 IMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYIN 438
Query: 402 DTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444
+ + G +SGIG G + + + + +S
Sbjct: 439 RENFEAMQGF--HAGWRKSGIGGADGKHGLHEYLQTQVVYLQS 479
>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|B Chain B, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|C Chain C, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|D Chain D, Retinal Dehydrogenase Type Two With Nad Bound
Length = 499
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 190/445 (42%), Gaps = 38/445 (8%)
Query: 17 QTFRSGITKSVAWRK---NQLRALIELLQD--NEDKIFKALHQDL--GKHPVETYRDEIG 69
Q R + WR+ ++ L++ L D D+ A + L GK ++ + ++
Sbjct: 63 QAARLAFSLGSVWRRMDASERGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYIDLQ 122
Query: 70 LIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVS----EPFGVVLICSAWNFPINLA 125
+ K+ +Y DK + + P G+ + EP GV WNFP+ +
Sbjct: 123 GVIKTLRYYAGWADK--------IHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMF 174
Query: 126 LEPLIGAIAAGNTVMLKPSELAVECASFLAETI------PLYLDCKAIKVTNGGVDVCEQ 179
+ A+ GNTV++KP+E A ++ I P ++ G +
Sbjct: 175 TWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASH 234
Query: 180 LLQQKWNKIFFTGSPRVGSIVMSAAAK-HLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238
+ +KI FTGS VG ++ AA + +L VTLELGGK P I+ + D+ V++
Sbjct: 235 I---GIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNII---FADADLDYAVEQ 288
Query: 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIE-SLKTTIKKFYGENPKDSKSISRIINEY 297
G F + GQ C I VE+ ++ S++ ++ G + I++
Sbjct: 289 AHQGVFFN-QGQCCTAGSRIFVEESIYEEFVKRSVERAKRRIVGSPFDPTTEQGPQIDKK 347
Query: 298 HFERLRKLLKDPLVADAIVH--GGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPII 355
+ ++ +L++ + A + G L ++ FIEPT+ + D I EEIFGP+ I+
Sbjct: 348 QYNKILELIQSGVAEGAKLECGGKGLGRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEIL 407
Query: 356 TLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFG 415
+ E IE N+ L FT D + S +G++ N L PFG
Sbjct: 408 RFKTMDEVIERANNSDFGLVAAVFTNDINKALMVSSAMQAGTVWIN--CYNALNAQSPFG 465
Query: 416 GVGQSGIGRYHGHYSFETFSHEKAI 440
G SG GR G + +S K +
Sbjct: 466 GFKMSGNGREMGEFGLREYSEVKTV 490
>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1A4Z|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
Length = 499
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 180/430 (41%), Gaps = 35/430 (8%)
Query: 30 RKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPK 89
R L L +L++ + + D GK + +Y ++ ++ K +Y DK+
Sbjct: 83 RGRLLNRLADLIERDRTYLAALETLDNGKPYIISYLVDLDMVLKCLRYYAGWADKYHGKT 142
Query: 90 KRRLPLLFFPASGEVVS----EPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSE 145
P G+ S EP GV WNFP+ + L A+A GN V++K +E
Sbjct: 143 --------IPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAE 194
Query: 146 LAVECASFLAETI------PLYLDCKAIKVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSI 199
A ++A I P ++ G + + +K+ FTGS VG +
Sbjct: 195 QTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASH---EDVDKVAFTGSTEVGHL 251
Query: 200 VMSAAAK-HLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYI 258
+ AA K +L VTLE+GGK P I+ S D+ V++ F + GQ C
Sbjct: 252 IQVAAGKSNLKRVTLEIGGKSPNII---MSDADMDWAVEQAHFALFFN-QGQCCCAGSRT 307
Query: 259 LVEKKFAATLIESLKTTIKKFYGENPKDSKS-ISRIINEYHFERLRKLLKDPLVADA--I 315
V++ A +E K NP DS++ ++E F+++ +K +
Sbjct: 308 FVQEDIYAEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKVLGYIKSGKEEGLKLL 367
Query: 316 VHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLA 375
GG FI+PT+ D I EEIFGP++ I+ +++E + N+ LA
Sbjct: 368 CGGGAAADRGYFIQPTVFGDLQDGMTIAKEEIFGPVMQILKFKSMEEVVGRANNSKYGLA 427
Query: 376 IYAFTKDETFKKQIVSGTSSGSLIFN--DTLVQQLCDVLPFGGVGQSGIGRYHGHYSFET 433
FTKD + +G++ N D Q PFGG SG GR G Y +
Sbjct: 428 AAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQ----SPFGGYKLSGSGRELGEYGLQA 483
Query: 434 FSHEKAIMQR 443
++ K + R
Sbjct: 484 YTEVKTVTVR 493
>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N82|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N83|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
Length = 500
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 121/465 (26%), Positives = 193/465 (41%), Gaps = 53/465 (11%)
Query: 4 AMGEIEDKLAELRQTFRSGITKSVAWRK----------NQLRALIELLQDNEDKIFKALH 53
A G+ ED + + + R+ WR+ N+L LIE D+ + A
Sbjct: 52 AEGDKED-VDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIE-----RDRTYLAAL 105
Query: 54 Q--DLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVS----E 107
+ D GK V +Y ++ ++ K +Y DK+ P G+ S E
Sbjct: 106 ETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKT--------IPIDGDFFSYTRHE 157
Query: 108 PFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI------PLY 161
P GV WNFP+ + L A+A GN V++K +E A ++A I P
Sbjct: 158 PVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGV 217
Query: 162 LDCKAIKVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIV-MSAAAKHLTPVTLELGGKCP 220
++ G + + +K+ F GS +G ++ ++A + +L VTLELGGK P
Sbjct: 218 VNIVPGFGPTAGAAIASH---EDVDKVAFAGSTEIGRVIQVAAGSSNLKRVTLELGGKSP 274
Query: 221 AILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFY 280
I+ S D+ V++ F + GQ C V++ +E K
Sbjct: 275 NII---MSDADMDWAVEQAHFALFFN-QGQCCCAGSRTFVQEDIYDEFVERSVARAKSRV 330
Query: 281 GENPKDSKS-ISRIINEYHFERLRKLLKDPLVADA--IVHGGLLDKENLFIEPTILLDPP 337
NP DSK+ ++E F+++ + A + GG+ FI+PT+ D
Sbjct: 331 VGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQ 390
Query: 338 LDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGS 397
I EEIFGP++ I+ I+E + N+ LA FTKD + +G+
Sbjct: 391 DGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGT 450
Query: 398 LIFN--DTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
+ N D Q PFGG SG GR G Y + ++ K +
Sbjct: 451 VWVNCYDVFGAQ----SPFGGYKMSGSGRELGEYGLQAYTEVKTV 491
>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONO|A Chain A, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|B Chain B, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|C Chain C, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|D Chain D, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|E Chain E, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|F Chain F, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|G Chain G, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|H Chain H, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONP|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
Length = 500
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 121/465 (26%), Positives = 194/465 (41%), Gaps = 53/465 (11%)
Query: 4 AMGEIEDKLAELRQTFRSGITKSVAWRK----------NQLRALIELLQDNEDKIFKALH 53
A G+ ED + + + R+ WR+ N+L LIE D+ + A
Sbjct: 52 AEGDKED-VDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIE-----RDRTYLAAL 105
Query: 54 Q--DLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVS----E 107
+ D GK V +Y ++ ++ K +Y DK+ P G+ S E
Sbjct: 106 ETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKT--------IPIDGDFFSYTRHE 157
Query: 108 PFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI------PLY 161
P GV WNFP+ + L A+A GN V++K +E A ++A I P
Sbjct: 158 PVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGV 217
Query: 162 LDCKAIKVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIV-MSAAAKHLTPVTLELGGKCP 220
++ G + + +K+ FTGS +G ++ ++A + +L VTLELGGK P
Sbjct: 218 VNIVPGFGPTAGAAIASH---EDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSP 274
Query: 221 AILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFY 280
I+ S D+ V++ F + GQ C V++ +E K
Sbjct: 275 NII---MSDADMDWAVEQAHFALFFN-QGQCCCAGSRTFVQEDIYDEFVERSVARAKSRV 330
Query: 281 GENPKDSKS-ISRIINEYHFERLRKLLKDPLVADA--IVHGGLLDKENLFIEPTILLDPP 337
NP DSK+ ++E F+++ + A + GG+ FI+PT+ D
Sbjct: 331 VGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQ 390
Query: 338 LDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGS 397
I EEIFGP++ I+ I+E + N+ LA FTKD + +G+
Sbjct: 391 DGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGT 450
Query: 398 LIFN--DTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
+ N D Q PFGG SG G+ G Y + ++ K +
Sbjct: 451 VWVNCYDVFGAQ----SPFGGYKMSGSGQELGEYGLQAYTEVKTV 491
>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|2ONM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
Length = 500
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 121/459 (26%), Positives = 191/459 (41%), Gaps = 53/459 (11%)
Query: 4 AMGEIEDKLAELRQTFRSGITKSVAWRK----------NQLRALIELLQDNEDKIFKALH 53
A G+ ED + + + R+ WR+ N+L LIE D+ + A
Sbjct: 52 AEGDKED-VDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIE-----RDRTYLAAL 105
Query: 54 Q--DLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVS----E 107
+ D GK V +Y ++ ++ K +Y DK+ P G+ S E
Sbjct: 106 ETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKT--------IPIDGDFFSYTRHE 157
Query: 108 PFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI------PLY 161
P GV WNFP+ + L A+A GN V++K +E A ++A I P
Sbjct: 158 PVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGV 217
Query: 162 LDCKAIKVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIV-MSAAAKHLTPVTLELGGKCP 220
++ G + + +K+ FTGS +G ++ ++A + +L VTLELGGK P
Sbjct: 218 VNIVPGFGPTAGAAIASH---EDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSP 274
Query: 221 AILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFY 280
I+ S D+ V++ F + GQ C V++ +E K
Sbjct: 275 NII---MSDADMDWAVEQAHFALFFN-QGQCCCAGSRTFVQEDIYDEFVERSVARAKSRV 330
Query: 281 GENPKDSKS-ISRIINEYHFERLRKLLKDPLVADA--IVHGGLLDKENLFIEPTILLDPP 337
NP DSK+ ++E F+++ + A + GG+ FI+PT+ D
Sbjct: 331 VGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQ 390
Query: 338 LDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGS 397
I EEIFGP++ I+ I+E + N+ LA FTKD + +G+
Sbjct: 391 DGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGT 450
Query: 398 LIFN--DTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETF 434
+ N D Q PFGG SG GR G Y + +
Sbjct: 451 VWVNCYDVFGAQ----SPFGGYKMSGSGRELGEYGLQAY 485
>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WND|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
Length = 495
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 110/422 (26%), Positives = 180/422 (42%), Gaps = 23/422 (5%)
Query: 30 RKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKY---ALSCLDKWM 86
R L L +++++N + ++ GK + DEI I ++ A CL+
Sbjct: 84 RAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLA 143
Query: 87 APKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSEL 146
A + + + +P GVV + WN+P+ +A L A+AAGN V+LKPSE+
Sbjct: 144 AGE------YLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEI 197
Query: 147 AVECASFLAETIPLYLDCKAIKVTNG-GVDVCEQLLQQ-KWNKIFFTGSPRVGSIVMSAA 204
A LAE + + G G V + L K + TGS G ++S
Sbjct: 198 TPLTALKLAELAKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHT 257
Query: 205 AKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCN-GQVCVGVDYILVEKK 263
A + +ELGGK P I + DI+ V+ + F N GQ C I +K
Sbjct: 258 ASSIKRTHMELGGKAPVI---VFDDADIEAVVEGVR--TFGYYNAGQDCTAACRIYAQKG 312
Query: 264 FAATLIESLKTTIKKFYGENPKD-SKSISRIINEYHFERLRKLLKDPLVADAI--VHGGL 320
TL+E L + P D S + + + H ER+ K +++ I + GG
Sbjct: 313 IYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGE 372
Query: 321 LDKEN-LFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAF 379
K N + PT+L D I+ +E+FGP++ + +N ++ + + N LA +
Sbjct: 373 KRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVW 432
Query: 380 TKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKA 439
TKD ++ + G N + L +P GG SG G+ Y E ++ +
Sbjct: 433 TKDVGRAHRVSARLQYGCTWVNTHFM--LVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRH 490
Query: 440 IM 441
+M
Sbjct: 491 VM 492
>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|B Chain B, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|C Chain C, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|D Chain D, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|E Chain E, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|F Chain F, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|G Chain G, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|H Chain H, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
Length = 500
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 121/465 (26%), Positives = 194/465 (41%), Gaps = 53/465 (11%)
Query: 4 AMGEIEDKLAELRQTFRSGITKSVAWRK----------NQLRALIELLQDNEDKIFKALH 53
A G+ ED + + + R+ WR+ N+L LIE D+ + A
Sbjct: 52 AEGDKED-VDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIE-----RDRTYLAAL 105
Query: 54 Q--DLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVS----E 107
+ D GK V +Y ++ ++ K +Y DK+ P G+ S E
Sbjct: 106 ETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKT--------IPIDGDFFSYTRHE 157
Query: 108 PFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI------PLY 161
P GV WNFP+ + L A+A GN V++K +E A ++A I P
Sbjct: 158 PVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGV 217
Query: 162 LDCKAIKVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIV-MSAAAKHLTPVTLELGGKCP 220
++ G + + +K+ FTGS +G ++ ++A + +L VTL+LGGK P
Sbjct: 218 VNIVPGFGPTAGAAIASH---EDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLQLGGKSP 274
Query: 221 AILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFY 280
I+ S D+ V++ F + GQ C V++ +E K
Sbjct: 275 NII---MSDADMDWAVEQAHFALFFN-QGQSCSAGSRTFVQEDIYDEFVERSVARAKSRV 330
Query: 281 GENPKDSKS-ISRIINEYHFERLRKLLKDPLVADA--IVHGGLLDKENLFIEPTILLDPP 337
NP DSK+ ++E F+++ + A + GG+ FI+PT+ D
Sbjct: 331 VGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQ 390
Query: 338 LDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGS 397
I EEIFGP++ I+ I+E + N+ LA FTKD + +G+
Sbjct: 391 DGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGT 450
Query: 398 LIFN--DTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
+ N D Q PFGG SG GR G Y + ++ K +
Sbjct: 451 VWVNCYDVFGAQ----SPFGGYKMSGSGRELGEYGLQAYTEVKTV 491
>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|B Chain B, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|C Chain C, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|D Chain D, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct
Length = 489
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 159/357 (44%), Gaps = 41/357 (11%)
Query: 107 EPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKA 166
EP GVV AWN+P+ +AL A+AAGN ++ KPSE+ A LAE +Y +
Sbjct: 140 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAE---IYTEAGV 196
Query: 167 IK-----VTNGGVDVCEQLLQQKW-NKIFFTGSPRVGSIVM-SAAAKHLTPVTLELGGKC 219
+T G +V + L + KI FTG G VM SA++ L VT+ELGGK
Sbjct: 197 PDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKS 256
Query: 220 PAIL---DTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTI 276
P I+ L DI V + F+S GQVC + + + A + +
Sbjct: 257 PLIIFPDADLDRAADIAV-----MANFFSS--GQVCTNGTRVFIHRSQQARFEAKVLERV 309
Query: 277 KKFYGENPKDS-------------KSISRIINEYHFERLRKLLKDPLVADAIVHGGLLDK 323
++ +P+D +S+ I ++ R L V D G
Sbjct: 310 QRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKG---- 365
Query: 324 ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDE 383
++ PT+ D D I+ EEIFGP++ I+ ++ E+I N LA T+D
Sbjct: 366 --AYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDL 423
Query: 384 TFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
+ + +G + + +T + + +P GG QSG+GR +G + ++ K++
Sbjct: 424 ARAHRAIHRLEAG-ICWINTWGESPAE-MPVGGYKQSGVGRENGLTTLAHYTRIKSV 478
>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|F Chain F, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|G Chain G, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|H Chain H, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 159/357 (44%), Gaps = 41/357 (11%)
Query: 107 EPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKA 166
EP GVV AWN+P+ +AL A+AAGN ++ KPSE+ A LAE +Y +
Sbjct: 141 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAE---IYTEAGV 197
Query: 167 IK-----VTNGGVDVCEQLLQQKW-NKIFFTGSPRVGSIVM-SAAAKHLTPVTLELGGKC 219
+T G +V + L + KI FTG G VM SA++ L VT+ELGGK
Sbjct: 198 PDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKS 257
Query: 220 PAIL---DTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTI 276
P I+ L DI V + F+S GQVC + + + A + +
Sbjct: 258 PLIIFPDADLDRAADIAV-----MANFFSS--GQVCTNGTRVFIHRSQQARFEAKVLERV 310
Query: 277 KKFYGENPKDS-------------KSISRIINEYHFERLRKLLKDPLVADAIVHGGLLDK 323
++ +P+D +S+ I ++ R L V D G
Sbjct: 311 QRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKG---- 366
Query: 324 ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDE 383
++ PT+ D D I+ EEIFGP++ I+ ++ E+I N LA T+D
Sbjct: 367 --AYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDL 424
Query: 384 TFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
+ + +G + + +T + + +P GG QSG+GR +G + ++ K++
Sbjct: 425 ARAHRAIHRLEAG-ICWINTWGESPAE-MPVGGYKQSGVGRENGLTTLAHYTRIKSV 479
>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
Length = 500
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 121/465 (26%), Positives = 195/465 (41%), Gaps = 53/465 (11%)
Query: 4 AMGEIEDKLAELRQTFRSGITKSVAWRK----------NQLRALIELLQDNEDKIFKALH 53
A G+ ED + + + R+ WR+ N+L LIE D+ + A
Sbjct: 52 AEGDKED-VDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIE-----RDRTYLAAL 105
Query: 54 Q--DLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVS----E 107
+ D GK V +Y ++ ++ K +Y DK+ P G+ S E
Sbjct: 106 ETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKT--------IPIDGDFFSYTRHE 157
Query: 108 PFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI------PLY 161
P GV WNFP+ + L A+A GN V++K +E A ++A I P
Sbjct: 158 PVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGV 217
Query: 162 LDCKAIKVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIV-MSAAAKHLTPVTLELGGKCP 220
++ G + + +K+ FTGS +G ++ ++A + +L VTLELGGK P
Sbjct: 218 VNIVPGFGPTAGAAIASH---EDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSP 274
Query: 221 AILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFY 280
I+ S D+ V++ F + C G + E + + S+ +
Sbjct: 275 NII---MSDADMDWAVEQAHFALFFNQGQCXCAGSRTFVQEDIYDEFVERSVARAKSRVV 331
Query: 281 GENPKDSKS-ISRIINEYHFERLRKLLKDPLVADA--IVHGGLLDKENLFIEPTILLDPP 337
G NP DSK+ ++E F+++ + A + GG+ FI+PT+ D
Sbjct: 332 G-NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQ 390
Query: 338 LDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGS 397
I EEIFGP++ I+ I+E + N+ LA FTKD + +G+
Sbjct: 391 DGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGT 450
Query: 398 LIFN--DTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
+ N D Q PFGG SG GR G Y + ++ K +
Sbjct: 451 VWVNCYDVFGAQ----SPFGGYKMSGSGRELGEYGLQAYTEVKTV 491
>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|D Chain D, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|E Chain E, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|F Chain F, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|G Chain G, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|H Chain H, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
Length = 538
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 142/329 (43%), Gaps = 13/329 (3%)
Query: 103 EVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYL 162
+ V P GV ++ WNF + + I GNTV+LKP+ A A+ E +
Sbjct: 167 QYVYTPTGVTVVIPPWNFLFAIMAGTTVAPIVTGNTVVLKPASAAPVIAAKFVEVLEESG 226
Query: 163 DCKAIK--VTNGGVDVCEQLLQQ-KWNKIFFTGSPRVGSIVMSAAAK------HLTPVTL 213
K + V G +V + L+ K + I FTGS VG+ + AAK HL V
Sbjct: 227 LPKGVVNFVPGSGAEVGDYLVDHPKTSIITFTGSREVGTRIFERAAKVQPGQTHLKQVIA 286
Query: 214 ELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLK 273
E+GGK ++D DI++ + I F + G ++ EK + L ++
Sbjct: 287 EMGGKDTVVVD---EDCDIELAAQSIFTSAFGFAGQKCSAGSRAVVHEKVYDEVLKRVIE 343
Query: 274 TTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLD-KENLFIEPTI 332
T K GE + +I++ F ++ ++ +V GG D + FIEPTI
Sbjct: 344 ITESKKVGEPDSADVYMGPVIDQASFNKIMDYIEIGKEEGRLVSGGKGDDSKGYFIEPTI 403
Query: 333 LLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG 392
D A +M EEIFGP++ +++ E++E N+ L TK+ +
Sbjct: 404 FADLDPKARLMQEEIFGPVVAFSKVSSFDEALEVANNTEYGLTGAVITKNRDHINRAKQE 463
Query: 393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSG 421
G+L FN + PFGG SG
Sbjct: 464 FHVGNLYFNRNCTGAIVGYHPFGGFKMSG 492
>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1O04|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
Length = 500
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 121/465 (26%), Positives = 195/465 (41%), Gaps = 53/465 (11%)
Query: 4 AMGEIEDKLAELRQTFRSGITKSVAWRK----------NQLRALIELLQDNEDKIFKALH 53
A G+ ED + + + R+ WR+ N+L LIE D+ + A
Sbjct: 52 AEGDKED-VDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIE-----RDRTYLAAL 105
Query: 54 Q--DLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVS----E 107
+ D GK V +Y ++ ++ K +Y DK+ P G+ S E
Sbjct: 106 ETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKT--------IPIDGDFFSYTRHE 157
Query: 108 PFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI------PLY 161
P GV WNFP+ + L A+A GN V++K +E A ++A I P
Sbjct: 158 PVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGV 217
Query: 162 LDCKAIKVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIV-MSAAAKHLTPVTLELGGKCP 220
++ G + + +K+ FTGS +G ++ ++A + +L VTLELGGK P
Sbjct: 218 VNIVPGFGPTAGAAIASH---EDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSP 274
Query: 221 AILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFY 280
I+ S D+ V++ F + C G + E + + S+ +
Sbjct: 275 NII---MSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVV 331
Query: 281 GENPKDSKS-ISRIINEYHFERLRKLLKDPLVADA--IVHGGLLDKENLFIEPTILLDPP 337
G NP DSK+ ++E F+++ + A + GG+ FI+PT+ D
Sbjct: 332 G-NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQ 390
Query: 338 LDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGS 397
I EEIFGP++ I+ I+E + N+ LA FTKD + +G+
Sbjct: 391 DGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGT 450
Query: 398 LIFN--DTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
+ N D Q PFGG SG GR G Y + ++ K +
Sbjct: 451 VWVNCYDVFGAQ----SPFGGYKMSGSGRELGEYGLQAYTEVKTV 491
>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
Length = 490
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 161/357 (45%), Gaps = 41/357 (11%)
Query: 107 EPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKA 166
EP GVV AWN+P+ +AL A+AAGN ++ KPSE+ A LAE +Y +
Sbjct: 141 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAE---IYTEAGV 197
Query: 167 IK-----VTNGGVDVCEQLLQQKW-NKIFFTGSPRVGSIVM-SAAAKHLTPVTLELGGKC 219
+T G +V + L + KI FTG G VM SA++ L VT+ELGGK
Sbjct: 198 PDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKS 257
Query: 220 PAIL---DTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTI 276
P I+ L DI V G+ A+ +V + + + +F A ++E +
Sbjct: 258 PLIIFPDADLDRAADIAVMANFFSSGQVATNGTRVFI---HRSQQARFEAKVLER----V 310
Query: 277 KKFYGENPKDS-------------KSISRIINEYHFERLRKLLKDPLVADAIVHGGLLDK 323
++ +P+D +S+ I ++ R L V D G
Sbjct: 311 QRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKG---- 366
Query: 324 ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDE 383
++ PT+ D D I+ EEIFGP++ I+ ++ E+I N LA T+D
Sbjct: 367 --AYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDL 424
Query: 384 TFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
+ + +G + + +T + + +P GG QSG+GR +G + ++ K++
Sbjct: 425 ARAHRAIHRLEAG-ICWINTWGESPAE-MPVGGYKQSGVGRENGLTTLAHYTRIKSV 479
>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
pdb|3RH9|B Chain B, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
Length = 506
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 182/409 (44%), Gaps = 25/409 (6%)
Query: 30 RKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEI----GLIKKSAKYALSCLDKW 85
R+ L + + L++N ++I + L + GK P + + E+ G AK+ +S LD
Sbjct: 73 RRKWLEDIRDGLKENREEIGRILCXEHGK-PWKEAQGEVDYAAGFFDYCAKH-ISALDSH 130
Query: 86 MAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKP-S 144
P+K + + V P GV + WNFPI + L A+AAG ++KP S
Sbjct: 131 TIPEKPK------DCTWTVHYRPVGVTGLIVPWNFPIGXIAKKLSAALAAGCPSVIKPAS 184
Query: 145 ELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQKWN--KIFFTGSPRVGSIVMS 202
E + +F + L L + + G V ++L + + + FTGS VG ++
Sbjct: 185 ETPLTXIAFFSVXDKLDLPDGXVNLVXGKASVIGKVLCEHKDVPXLSFTGSTEVGRKLIV 244
Query: 203 AAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEK 262
A+ + + LELGG P I+ + ++ +I KF GQ CV + I V +
Sbjct: 245 DTAEQVKKLALELGGNAPFIVFDDAD---LEAAADNLIANKFRG-GGQTCVCANRIFVHE 300
Query: 263 KFAATLIESLKTTIKKF-YGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLL 321
K A + L + K G+ D I +IN+ F+++++ L+D L A + G
Sbjct: 301 KVADAFGQKLAERVNKXTVGDGXNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQ 360
Query: 322 DKE---NLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYA 378
E LF PT++ + EE FGP++P +E I+ N LA Y
Sbjct: 361 PAELGDGLFFPPTVVQGVDREXCCYQEETFGPLVPXALFRTEEEVIDAGNDTEFGLASYV 420
Query: 379 FTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHG 427
FT D +++ +G G + +N PFGG SGIGR G
Sbjct: 421 FTADAERAQRVAAGLRFGHVGWNTGT--GPTPEAPFGGXKASGIGREGG 467
>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|B Chain B, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|C Chain C, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|D Chain D, The X-Ray Crystal Structure Of Eta-Crystallin
Length = 501
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 120/463 (25%), Positives = 197/463 (42%), Gaps = 52/463 (11%)
Query: 7 EIEDKLAELRQTFRSGI---TKSVAWRKNQLRALIELLQDNEDKIFKALHQDL--GKHPV 61
+++ + R+ F+ G T + R + L +L++ D++ A + + GK
Sbjct: 59 DVDKAVKAAREAFQMGSPWRTMDASERGQLIYKLADLIE--RDRLLLATLESINAGKVFA 116
Query: 62 ETYRDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVS----EPFGVVLICSA 117
Y ++ K+ +Y DK R +P+ GE S EP GV +
Sbjct: 117 SAYLMDLDYCIKALRYCAGWADKIQG---RTIPV-----DGEFFSYTRHEPIGVCGLIFP 168
Query: 118 WNFPINLALEPLIGAIAAGNTVMLKPSE----LAVECASFLAET---------IPLYLDC 164
WN P+ L + A+ GNTV++KP+E A+ AS + E +P Y
Sbjct: 169 WNAPMILLACKIGPALCCGNTVIVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPT 228
Query: 165 KAIKVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAK-HLTPVTLELGGKCPAIL 223
+++ +DV +K+ FTGS VG ++ AAAK +L VTLELG K P I+
Sbjct: 229 AGAAISSH-MDV---------DKVAFTGSTEVGKMIQEAAAKSNLKRVTLELGAKNPCIV 278
Query: 224 DTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGEN 283
+ D+ V+ G F + GQ C+ + VE+ ++ KK+ N
Sbjct: 279 ---FADADLDSAVEFAHQGVFTN-QGQSCIAASKLFVEEAIYDEFVQRSVERAKKYVFGN 334
Query: 284 P-KDSKSISRIINEYHFERLRKLLKDPLVADAIVH--GGLLDKENLFIEPTILLDPPLDA 340
P + IN+ ++ +L++ A + GG + FI+PT+ + D
Sbjct: 335 PLTPGVNHGPQINKAQHNKIMELIESGKKEGAKLECGGGPWGNKGYFIQPTVFSNVTDDM 394
Query: 341 EIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIF 400
I EEIFGP+ I+ ++ E I+ N+ L FTKD + S +G++
Sbjct: 395 RIAKEEIFGPVQQIMKFKSLDEVIKRANNTYYGLVAGVFTKDLDKAVTVSSALQAGTVWV 454
Query: 401 NDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443
N L P GG SG GR G Y ++ K + +
Sbjct: 455 NCYLAASAQS--PAGGFKMSGHGREMGEYGIHEYTEVKTVTMK 495
>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|B Chain B, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|C Chain C, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|D Chain D, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
Length = 515
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 123/461 (26%), Positives = 204/461 (44%), Gaps = 37/461 (8%)
Query: 1 MAAAMGEIE-DKLAEL-RQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGK 58
+AA GE E D+ A+ + F+ RK L + EL++ + D++ D G+
Sbjct: 57 VAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQ 116
Query: 59 HPVETYRDEIGLIKKS----AKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLI 114
+ R ++ ++ A+YA ++ P R L++ V P G V I
Sbjct: 117 -VLRIVRAQVARAAENFAFYAEYAEHAMEDRTFPVDR--DWLYY-----TVRVPAGPVGI 168
Query: 115 CSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI-PLYLDCKAIKVTNG- 172
+ WN P+ L+ + A+A GNTV+LKP+E + A+ LAE + L + G
Sbjct: 169 ITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGF 228
Query: 173 GVDVCEQLLQQKWNKIF-FTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLD 231
G + L+ + TG G IVM AA HL ++ ELGGK PA+ + + D
Sbjct: 229 GEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGKSPAL---VFADAD 285
Query: 232 IKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKS-I 290
++ + ++ F S NG+ C +LVE+K + + + +P D ++ +
Sbjct: 286 LERALDAVVFQIF-SFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEV 344
Query: 291 SRIINEYHFERL-----------RKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLD 339
+I+ H +R+ +LL A G L + N + PT+ +
Sbjct: 345 GPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLL-PTVFVGEN-H 402
Query: 340 AEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLI 399
+I EEIFGP+L I + +E++ N LA Y FT+D ++ +G +
Sbjct: 403 MKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVY 462
Query: 400 FNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
N V+ L PFGGV SG R G Y+ + ++ K I
Sbjct: 463 LNSHNVRHLPT--PFGGVKGSGDRREGGTYALDFYTDLKTI 501
>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
Length = 489
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 158/357 (44%), Gaps = 41/357 (11%)
Query: 107 EPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKA 166
EP GVV AWN+P+ +AL A+AAGN ++ KPSE+ A LAE +Y +
Sbjct: 140 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAE---IYTEAGV 196
Query: 167 IK-----VTNGGVDVCEQLLQQKW-NKIFFTGSPRVGSIVM-SAAAKHLTPVTLELGGKC 219
+T G +V + L + KI FTG G VM SA++ L VT+ LGGK
Sbjct: 197 PDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMALGGKS 256
Query: 220 PAIL---DTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTI 276
P I+ L DI V + F+S GQVC + + + A + +
Sbjct: 257 PLIIFPDADLDRAADIAV-----MANFFSS--GQVCTNGTRVFIHRSQQARFEAKVLERV 309
Query: 277 KKFYGENPKDS-------------KSISRIINEYHFERLRKLLKDPLVADAIVHGGLLDK 323
++ +P+D +S+ I ++ R L V D G
Sbjct: 310 QRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKG---- 365
Query: 324 ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDE 383
++ PT+ D D I+ EEIFGP++ I+ ++ E+I N LA T+D
Sbjct: 366 --AYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDL 423
Query: 384 TFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
+ + +G + + +T + + +P GG QSG+GR +G + ++ K++
Sbjct: 424 ARAHRAIHRLEAG-ICWINTWGESPAE-MPVGGYKQSGVGRENGLTTLAHYTRIKSV 478
>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|E Chain E, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|F Chain F, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|G Chain G, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|H Chain H, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4F3X|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
Length = 498
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 111/447 (24%), Positives = 179/447 (40%), Gaps = 21/447 (4%)
Query: 3 AAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQ-DLGKHPV 61
A+ +I+ + + F + A R N L + + ++ D+ F AL + GK
Sbjct: 59 ASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEADE-FAALEALNCGKPIN 117
Query: 62 ETYRDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPA-SGEVVSEPFGVVLICSAWNF 120
DE+ I ++ + AP + P + + +P G+V + WN+
Sbjct: 118 AVKNDELPAIIDCWRFFAGAVRNLHAPAAGE----YLPGHTSXIRRDPIGIVGSIAPWNY 173
Query: 121 PINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNG-GVDVCEQ 179
P+ L AI GNTV+ KPSE A LA I L + V G G V
Sbjct: 174 PLXXXAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADILPEGVVNVITGRGETVGNA 233
Query: 180 LLQQ-KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238
L+ K + TG G V++AAAK + LELGGK P I + D++ V
Sbjct: 234 LINHPKVGXVSITGDIATGKKVLAAAAKTVKRTHLELGGKAPVI---VYGDADLEAVVNG 290
Query: 239 IIGGKFASCN-GQVCVGVDYILVEKKFAATLIESLKTTIKKF-YGENPKDSKSISRIINE 296
I F N GQ C I E L+ L + + Y + I +I+
Sbjct: 291 IR--TFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISR 348
Query: 297 YHFERLRKLLK---DPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILP 353
+R+ ++ D + G E F +PT++ + EI+ E+FGP++
Sbjct: 349 RQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVS 408
Query: 354 IITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLP 413
+ +++ + N LA +TKD + + S G N L + P
Sbjct: 409 VTRFTGKDDAVAWANDSDYGLASSVWTKDISKAXRAASRLQYGCTWINTHF--XLTNEXP 466
Query: 414 FGGVGQSGIGRYHGHYSFETFSHEKAI 440
GG+ QSG G+ Y+ E ++ + I
Sbjct: 467 HGGIKQSGYGKDXSVYALEDYTAVRHI 493
>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
Length = 500
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 120/459 (26%), Positives = 192/459 (41%), Gaps = 53/459 (11%)
Query: 4 AMGEIEDKLAELRQTFRSGITKSVAWRK----------NQLRALIELLQDNEDKIFKALH 53
A G+ ED + + + R+ WR+ N+L LIE D+ + A
Sbjct: 52 AEGDKED-VDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIE-----RDRTYLAAL 105
Query: 54 Q--DLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVS----E 107
+ D GK V +Y ++ ++ K +Y DK+ P G+ S E
Sbjct: 106 ETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKT--------IPIDGDFFSYTRHE 157
Query: 108 PFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI------PLY 161
P GV WNFP+ + L A+A GN V++K +E A ++A I P
Sbjct: 158 PVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGV 217
Query: 162 LDCKAIKVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIV-MSAAAKHLTPVTLELGGKCP 220
++ G + + +K+ FTGS +G ++ ++A + +L VTLELGGK P
Sbjct: 218 VNIVPGFGPTAGAAIASH---EDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSP 274
Query: 221 AILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFY 280
I+ S D+ V++ F + C G + E + + S+ +
Sbjct: 275 NII---MSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVV 331
Query: 281 GENPKDSKS-ISRIINEYHFERLRKLLKDPLVADA--IVHGGLLDKENLFIEPTILLDPP 337
G NP DSK+ ++E F+++ + A + GG+ FI+PT+ D
Sbjct: 332 G-NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQ 390
Query: 338 LDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGS 397
I EEIFGP++ I+ I+E + N+ LA FTKD + +G+
Sbjct: 391 DGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGT 450
Query: 398 LIFN--DTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETF 434
+ N D Q PFGG SG GR G Y + +
Sbjct: 451 VWVNCYDVFGAQ----SPFGGYKMSGSGRELGEYGLQAY 485
>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
Length = 503
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 157/350 (44%), Gaps = 25/350 (7%)
Query: 107 EPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAET-----IPLY 161
EP GV AWN+P +A A+A GN V+ KPS + LAE +P+
Sbjct: 154 EPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVG 213
Query: 162 LDCKAIKVTNGGVDVCEQLLQQ-KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCP 220
L + V GG + L K+ FTGS G VM +AK + VTLELGGK P
Sbjct: 214 L----VNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSP 269
Query: 221 AILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFY 280
++ +++ V+ + F + GQVC + V+++ +E + K
Sbjct: 270 LLI---FKDCELENAVRGALMANFLT-QGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIV 325
Query: 281 GENPKDSKS-ISRIINEYHFERLRKLLKDPLVADAIVHGGLLD--------KENLFIEPT 331
+P +++ + +I++ +++ + A V G K F+ P
Sbjct: 326 VGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPC 385
Query: 332 ILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS 391
+L + D + EEIFGP++ ++ + +E ++ N+ LA FT+D + ++ +
Sbjct: 386 VLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAA 445
Query: 392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441
+G+ N + + +PFGG SG GR +G + + +S K ++
Sbjct: 446 NLEAGTCYINTYSISPV--EVPFGGYKMSGFGRENGQATVDYYSQLKTVI 493
>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|E Chain E, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 160/357 (44%), Gaps = 41/357 (11%)
Query: 107 EPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKA 166
EP GVV AWN+P+ +AL A+AAGN ++ KPSE+ A LAE +Y +
Sbjct: 141 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAE---IYTEAGV 197
Query: 167 IK-----VTNGGVDVCEQLLQQKW-NKIFFTGSPRVGSIVM-SAAAKHLTPVTLELGGKC 219
+T G +V + L + KI FTG G VM SA++ L VT+ELGGK
Sbjct: 198 PDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKS 257
Query: 220 PAIL---DTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTI 276
P I+ L DI V G+ + +V + + + +F A ++E +
Sbjct: 258 PLIIFPDADLDRAADIAVMANFFSSGQVXTNGTRVFI---HRSQQARFEAKVLER----V 310
Query: 277 KKFYGENPKDS-------------KSISRIINEYHFERLRKLLKDPLVADAIVHGGLLDK 323
++ +P+D +S+ I ++ R L V D G
Sbjct: 311 QRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKG---- 366
Query: 324 ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDE 383
++ PT+ D D I+ EEIFGP++ I+ ++ E+I N LA T+D
Sbjct: 367 --AYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDL 424
Query: 384 TFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
+ + +G + + +T + + +P GG QSG+GR +G + ++ K++
Sbjct: 425 ARAHRAIHRLEAG-ICWINTWGESPAE-MPVGGYKQSGVGRENGLTTLAHYTRIKSV 479
>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
Length = 538
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 143/325 (44%), Gaps = 15/325 (4%)
Query: 108 PFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAI 167
P GV + S WNF + + + + I GNTV+LKP+ A+ E + K +
Sbjct: 172 PMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGV 231
Query: 168 --KVTNGGVDVCEQLLQQ-KWNKIFFTGSPRVG------SIVMSAAAKHLTPVTLELGGK 218
V G +V + L+ K + I FTGS VG + V+ HL V +E+GGK
Sbjct: 232 INYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGK 291
Query: 219 CPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKK 278
++D + D+ + + I+ F +GQ C ++ K ++E K
Sbjct: 292 DTVVVDRDA---DLDLAAESILVSAFG-FSGQKCSAGSRAVIHKDVYDEVLEKTVALAKN 347
Query: 279 FYGENPKDSKS-ISRIINEYHFERLRKLLKDPLVADAIVHGGLLDKEN-LFIEPTILLDP 336
+P + + + +I+E FE++ ++ ++ GG D FI+PTI+ D
Sbjct: 348 LTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEGRLMTGGEGDSSTGFFIQPTIIADL 407
Query: 337 PLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSG 396
+A IM EEIFGP++ N+ ++E N+ L T++ +Q G
Sbjct: 408 DPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVG 467
Query: 397 SLIFNDTLVQQLCDVLPFGGVGQSG 421
+L FN + PFGG SG
Sbjct: 468 NLYFNRNCTGAIVGYHPFGGFKMSG 492
>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|4DNG|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
Length = 485
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 114/435 (26%), Positives = 191/435 (43%), Gaps = 41/435 (9%)
Query: 30 RKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSA---KYALSCLDKWM 86
RK L+ L +N D I + ++ G G I KS + ++ LD+ M
Sbjct: 68 RKAVLQKARGYLHENRDDIIMMIARETG-----------GTIIKSTIELEQTIAILDEAM 116
Query: 87 APKK-----RRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVML 141
+ +P + ++ P GV+ S +NFP+NL++ + AIA GN+V+
Sbjct: 117 TYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVH 176
Query: 142 KPS-ELAVECASFLAETIP-LYLDCKAIKVTNGGV-DVCEQLLQQKWNK-IFFTGSPRVG 197
KP + A+ + +A+ L + V V ++ + +L + I FTGS VG
Sbjct: 177 KPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVG 236
Query: 198 SIVMSAAAKHLTPVTLELGGKCP-AILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVD 256
+ A + + LELGG P A+L S D+ V I GKF GQ+C+ ++
Sbjct: 237 RHIGEIAGRAFKRMALELGGNNPFAVL----SDADVDRAVDAAIFGKFIH-QGQICMIIN 291
Query: 257 YILVEKKFAATLIESLKTTIKKF-YGENPKDSKSISRIINEYHFERLRKLLKDPLVADAI 315
I+V + +E +K+ YG+ + +INE E+ ++++ D I
Sbjct: 292 RIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKT-DGI 350
Query: 316 VHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLA 375
+ + P + + +++I E+F PI II + QE+I+ N L+
Sbjct: 351 ELAVEGKRVGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLS 410
Query: 376 IYAFTKD----ETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSF 431
FT D E F QI SG + ND V ++ FGG SG+GR+ +
Sbjct: 411 SAVFTSDLEKGEKFALQIDSGMTH----VNDQSVNDSPNI-AFGGNKASGVGRFGNPWVV 465
Query: 432 ETFSHEKAI-MQRSF 445
E F+ K I +Q+ +
Sbjct: 466 EEFTVTKWISIQKQY 480
>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Bartonella Henselae At 2.0a Resolution
Length = 497
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 159/343 (46%), Gaps = 17/343 (4%)
Query: 107 EPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI-PLYLDCK 165
+ GVV + + WN+P+N +I A+ AG T++LKPSE+A A AE + L
Sbjct: 160 DAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSG 219
Query: 166 AIKVTNG-GVDVCEQLLQQ-KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAIL 223
+ NG G +V L I FTGS R G + A+ L V LELGGK I
Sbjct: 220 VFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASNTLKRVCLELGGKGANI- 278
Query: 224 DTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKF-YGE 282
+ + DI ++R + F + +GQ C +LVE+ I++ K +K G
Sbjct: 279 --IFADADIDA-LQRGVRHCFYN-SGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGP 334
Query: 283 NPKDSKSISRIINEYHFERLRKLLKDPLVADA-IVHGG----LLDKENLFIEPTILLDPP 337
+ I ++++ +++++ L++ + A +V GG + + ++ PT+ D
Sbjct: 335 GHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVK 394
Query: 338 LDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGS 397
I EEIFGP+L ++ N E++ N L Y ++D + ++I + SG
Sbjct: 395 PHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGM 454
Query: 398 LIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
+ N +L FGGV SG R G + + F KAI
Sbjct: 455 VEVNG---HELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAI 494
>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|1UZB|B Chain B, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|2EIW|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
pdb|2EIW|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
Length = 516
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 179/424 (42%), Gaps = 36/424 (8%)
Query: 40 LLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFP 99
L++ + ++ L ++GK+ VE D I YA + L ++ P +P +P
Sbjct: 108 LMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAAL-RYRYPAVEVVP---YP 163
Query: 100 AS-GEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI 158
E P G ++ + WNFP+ + ++G +A GNTV+ KP+E AV + + E
Sbjct: 164 GEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIF 223
Query: 159 -PLYLDCKAIKVTNG-GVDVCEQLLQQ-KWNKIFFTGSPRVGSIVMSAAAKHLTP----- 210
+ G G +V L++ + I FTGS VG + AA + L P
Sbjct: 224 HEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWF 282
Query: 211 --VTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVD-YILVEKKFAAT 267
+E GGK I+D + D + + ++ + GQ C IL + +
Sbjct: 283 KRAYVETGGKNAIIVDETA---DFDLAAEGVVVSAYG-FQGQKCSAASRLILTQGAYEPV 338
Query: 268 LIESLKTTIKKFYG---ENPKDSKSISRIINEYHFERLRKLLKDPLVA----DAIVHGGL 320
L LK + G ENP +S E+ RK+L + ++ G
Sbjct: 339 LERVLKRAERLSVGPAEENPDLGPVVSA-------EQERKVLSYIEIGKNEGQLVLGGKR 391
Query: 321 LDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFT 380
L+ E FI PT+ + P A I EEIFGP+L +I + + E++E N P L ++
Sbjct: 392 LEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYS 451
Query: 381 KDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSF-ETFSHEKA 439
+ + G+L FN + L V PFGG SG G + F KA
Sbjct: 452 RKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKA 511
Query: 440 IMQR 443
+ +R
Sbjct: 512 VAER 515
>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2BJA|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2J40|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2J40|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2EJD|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJD|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJL|A Chain A, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
pdb|2EJL|B Chain B, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
Length = 516
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 177/423 (41%), Gaps = 34/423 (8%)
Query: 40 LLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFP 99
L++ + ++ L ++GK+ VE D I YA + L ++ P +P +P
Sbjct: 108 LMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAAL-RYRYPAVEVVP---YP 163
Query: 100 AS-GEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI 158
E P G ++ + WNFP+ + ++G +A GNTV+ KP+E AV + + E
Sbjct: 164 GEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIF 223
Query: 159 -PLYLDCKAIKVTNG-GVDVCEQLLQQ-KWNKIFFTGSPRVGSIVMSAAAKHLTP----- 210
+ G G +V L++ + I FTGS VG + AA + L P
Sbjct: 224 HEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWF 282
Query: 211 --VTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATL 268
+E GGK I+D + D + + ++ + + IL + + L
Sbjct: 283 KRAYVETGGKDAIIVDETA---DFDLAAEGVVVSAYGFQGQKXSAASRLILTQGAYEPVL 339
Query: 269 IESLKTTIKKFYG---ENPKDSKSISRIINEYHFERLRKLLKDPLVA----DAIVHGGLL 321
LK + G ENP +S E+ RK+L + ++ G L
Sbjct: 340 ERVLKRAERLSVGPAEENPDLGPVVSA-------EQERKVLSYIEIGKNEGQLVLGGKRL 392
Query: 322 DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTK 381
+ E FI PT+ + P A I EEIFGP+L +I + + E++E N P L +++
Sbjct: 393 EGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSR 452
Query: 382 DETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSF-ETFSHEKAI 440
+ G+L FN + L V PFGG SG G + F KA+
Sbjct: 453 KREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAV 512
Query: 441 MQR 443
+R
Sbjct: 513 AER 515
>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BHP|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BJK|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2BJK|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2IY6|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2IY6|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2EHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EJ6|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2EJ6|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2BHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2BHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2J5N|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2J5N|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2EIT|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EIT|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EHU|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EHU|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EII|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad.
pdb|2EII|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad
Length = 516
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 179/424 (42%), Gaps = 36/424 (8%)
Query: 40 LLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFP 99
L++ + ++ L ++GK+ VE D I YA + L ++ P +P +P
Sbjct: 108 LMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAAL-RYRYPAVEVVP---YP 163
Query: 100 AS-GEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI 158
E P G ++ + WNFP+ + ++G +A GNTV+ KP+E AV + + E
Sbjct: 164 GEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIF 223
Query: 159 -PLYLDCKAIKVTNG-GVDVCEQLLQQ-KWNKIFFTGSPRVGSIVMSAAAKHLTP----- 210
+ G G +V L++ + I FTGS VG + AA + L P
Sbjct: 224 HEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWF 282
Query: 211 --VTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVD-YILVEKKFAAT 267
+E GGK I+D + D + + ++ + GQ C IL + +
Sbjct: 283 KRAYVETGGKDAIIVDETA---DFDLAAEGVVVSAYG-FQGQKCSAASRLILTQGAYEPV 338
Query: 268 LIESLKTTIKKFYG---ENPKDSKSISRIINEYHFERLRKLLKDPLVA----DAIVHGGL 320
L LK + G ENP +S E+ RK+L + ++ G
Sbjct: 339 LERVLKRAERLSVGPAEENPDLGPVVSA-------EQERKVLSYIEIGKNEGQLVLGGKR 391
Query: 321 LDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFT 380
L+ E FI PT+ + P A I EEIFGP+L +I + + E++E N P L ++
Sbjct: 392 LEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYS 451
Query: 381 KDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSF-ETFSHEKA 439
+ + G+L FN + L V PFGG SG G + F KA
Sbjct: 452 RKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKA 511
Query: 440 IMQR 443
+ +R
Sbjct: 512 VAER 515
>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Lactobacillus Acidophilus
Length = 484
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 171/425 (40%), Gaps = 23/425 (5%)
Query: 29 WRKNQLRALIELLQD-------NEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81
WR + + E+L D +ED++ K + GK E+ ++E+ L Y
Sbjct: 42 WRHEEPASRAEILHDIANALKEHEDELAKXXTLEXGKLLSES-KEEVELCVSICNYYADH 100
Query: 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVML 141
+ + P K L + + + GV+ C WNFP+ + GN ++L
Sbjct: 101 GPEXLKPTKLNSDL----GNAYYLKQSTGVIXACEPWNFPLYQVIRVFAPNFIVGNPILL 156
Query: 142 KPSELAVECASFLAETIPLY--LDCKAIKVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSI 199
K + A+ A+ I + I + + + + + + TGS R GS
Sbjct: 157 KHAHNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLADIIADPRIQGVALTGSERGGSA 216
Query: 200 VMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYIL 259
V AA K+L T ELGG I+ + P ++ ++ +GQVC I+
Sbjct: 217 VAEAAGKNLKKSTXELGGNDAFIVLDDADPQ----VLRNVLNDARTYNDGQVCTSSKRII 272
Query: 260 VEKKFAATLIESLKTTIKKFYGENPKDSKSISRIIN-EYHFERLRKLLKDPLVADAIVHG 318
VEK ++ LK +P ++ + N E E+L +K+ + A A V
Sbjct: 273 VEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPXNSEKAKEKLEAQVKEAIDAGAKVFY 332
Query: 319 GL--LDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAI 376
+D + F PTIL D D + +E+FGPI + + + +I+ N L
Sbjct: 333 QYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGS 392
Query: 377 YAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSH 436
D K++ + +G + N + LPFGG+ +SG GR F +
Sbjct: 393 SVIGSDIDRAKKVSAQIETGXTVINGRWI--TSGELPFGGIKKSGYGRELSGLGLXAFVN 450
Query: 437 EKAIM 441
E ++
Sbjct: 451 EHLVI 455
>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3ETF|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
Length = 462
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/451 (23%), Positives = 181/451 (40%), Gaps = 36/451 (7%)
Query: 7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRD 66
EIE L+ F+ SVA R LR + + L+ + ++ + + ++ GK P++ R
Sbjct: 30 EIEHALSLAASGFKKWKXTSVAQRAQTLRDIGQALRAHAEEXAQCITREXGK-PIKQARA 88
Query: 67 EIGLIKKSAKYALSCLDKWMAPKKRRL----PLLFFPASGEVVSEPFGVVLICSAWNFPI 122
E+ KSA L W A P L + P GV+L WNFP+
Sbjct: 89 EV---TKSA-----ALCDWYAEHGPAXLNPEPTLVENQQAVIEYRPLGVILAIXPWNFPL 140
Query: 123 NLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQ 182
L + + AGN+ +LK + CA +A + + G V+ + +
Sbjct: 141 WQVLRGAVPILLAGNSYLLKHAPNVTGCAQXIARILA---EAGTPAGVYGWVNANNEGVS 197
Query: 183 QKWN-----KIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVK 237
Q N + TGS R G+ + + A L LELGG P I + + D+++ VK
Sbjct: 198 QXINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFI---VLNDADLELAVK 254
Query: 238 RIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP----KDSKSISR- 292
+ G++ + GQVC +VE+ A + +P D +R
Sbjct: 255 AAVAGRYQN-TGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKXGDPLVEENDLGPXARF 313
Query: 293 -IINEYHFERLRKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPI 351
+ +E H + + + A ++ G + E + T+L D D +E+FGP+
Sbjct: 314 DLRDELHQQVQASVAEG---ARLLLGGEKIAGEGNYYAATVLADVTPDXTAFRQELFGPV 370
Query: 352 LPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDV 411
I + ++ N L+ FT D+T + + G + N
Sbjct: 371 AAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEXAARLECGGVFINGYSASDA--R 428
Query: 412 LPFGGVGQSGIGRYHGHYSFETFSHEKAIMQ 442
+ FGGV +SG GR H+ F + + + +
Sbjct: 429 VAFGGVKKSGFGRELSHFGLHEFCNVQTVWK 459
>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|B Chain B, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|C Chain C, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|D Chain D, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
Length = 508
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 151/345 (43%), Gaps = 18/345 (5%)
Query: 110 GVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKA--- 166
GVV + S WNFP+NL++ + A+A GN V++KP+ + I A
Sbjct: 150 GVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVI 209
Query: 167 IKVTNGGVDVCEQLLQQKWNK-IFFTGSPRVGSIV--MSAAAKHLTPVTLELGGKCPAIL 223
V G ++ + + K I FTGS VG V ++ + V LELGG P ++
Sbjct: 210 STVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVV 269
Query: 224 DTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKF-YGE 282
+ F GQ+C+ ++ ++V+ +E +K G+
Sbjct: 270 LADADIDAAAQAAAVG---AFLH-QGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGD 325
Query: 283 NPKDSKSISRIINEYHFERLRKL--LKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDA 340
+ + +IN+ L++ L A V G + E + P + D D
Sbjct: 326 PSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDM 382
Query: 341 EIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIF 400
EI EEIFGP++ ++ ++ + E N+ L+ ++KD Q SG +
Sbjct: 383 EIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHI 442
Query: 401 NDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI-MQRS 444
ND V V+ FGG SG+GR++G ++ E F+ ++ I ++RS
Sbjct: 443 NDLTVNDEPHVM-FGGSKNSGLGRFNGDWAIEEFTTDRWIGIKRS 486
>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2Q|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2R|A Chain A, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|B Chain B, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|C Chain C, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|D Chain D, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|4GO2|A Chain A, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|B Chain B, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|C Chain C, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|D Chain D, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
Length = 517
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 108/458 (23%), Positives = 192/458 (41%), Gaps = 35/458 (7%)
Query: 3 AAMGEIEDKLAELRQTFRSGITKSVAWRKNQ--LRALIELLQDNEDKIFKALHQDLGKHP 60
A + +++ +A ++ F +G+ + R L L ++++ +++++ D G
Sbjct: 71 AQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVY 130
Query: 61 VETYRDEIGLIKKSAKYALSCLDKWM--------APKKRRLPLLFFPASGEVVSEPFGVV 112
+ +G+ ++ +Y DK A R L L EP GV
Sbjct: 131 TLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTL--------TKKEPVGVC 182
Query: 113 LICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAE-TIPLYLDCKAIKVTN 171
I WN+P+ + +AAGNTV++KP+++ A AE T+ + + +
Sbjct: 183 GIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILP 242
Query: 172 GGVDVCEQLLQQKWN--KIFFTGSPRVGSIVM-SAAAKHLTPVTLELGGKCPAILDTLSS 228
G + Q L + KI FTGS VG +M S A ++ V+LELGGK P I + +
Sbjct: 243 GSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLI---IFA 299
Query: 229 PLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSK 288
D+ V+ + F + G+ C+ + VE+ ++ + ++K NP +
Sbjct: 300 DCDLNKAVQMGMSSVFFN-KGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERD 358
Query: 289 SISRIIN-EYHFERLRKLLKDPLVADA--IVHGGLLDKENLFIEPTILLDPPLDAEIMTE 345
+ N E H +L + + + A + G + + F +PT+ D I E
Sbjct: 359 TNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKE 418
Query: 346 EIFGPILPIITL--NNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDT 403
E FGPI+ I ++ + N+ LA FT+D + +G++ N
Sbjct: 419 ESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFIN-- 476
Query: 404 LVQQLCDV-LPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
DV PFGG QSG G+ G + + K +
Sbjct: 477 -TYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513
>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHO|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 192/458 (41%), Gaps = 35/458 (7%)
Query: 3 AAMGEIEDKLAELRQTFRSGITKSVAWRKNQ--LRALIELLQDNEDKIFKALHQDLGKHP 60
A + +++ +A ++ F +G+ + R L L ++++ +++++ D G
Sbjct: 71 AQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVY 130
Query: 61 VETYRDEIGLIKKSAKYALSCLDKWM--------APKKRRLPLLFFPASGEVVSEPFGVV 112
+ +G+ ++ +Y DK A R L L EP GV
Sbjct: 131 TLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTL--------TKKEPVGVC 182
Query: 113 LICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAE-TIPLYLDCKAIKVTN 171
I WN+P+ + +AAGNTV++KP+++ A AE T+ + + +
Sbjct: 183 GIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILP 242
Query: 172 GGVDVCEQLLQQKWN--KIFFTGSPRVGSIVM-SAAAKHLTPVTLELGGKCPAILDTLSS 228
G + Q L + KI FTGS VG +M S A ++ V+L+LGGK P I + +
Sbjct: 243 GSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLQLGGKSPLI---IFA 299
Query: 229 PLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSK 288
D+ V+ + F + G+ C+ + VE+ ++ + ++K NP +
Sbjct: 300 DCDLNKAVQMGMSSVFFN-KGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERD 358
Query: 289 SISRIIN-EYHFERLRKLLKDPLVADA--IVHGGLLDKENLFIEPTILLDPPLDAEIMTE 345
+ N E H +L + + + A + G + + F +PT+ D I E
Sbjct: 359 TNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKE 418
Query: 346 EIFGPILPIITL--NNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDT 403
E FGPI+ I ++ + N+ LA FT+D + +G++ N
Sbjct: 419 ESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFIN-- 476
Query: 404 LVQQLCDV-LPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
DV PFGG QSG G+ G + + K +
Sbjct: 477 -TYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513
>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|B Chain B, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|C Chain C, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|D Chain D, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis
Length = 474
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 175/401 (43%), Gaps = 45/401 (11%)
Query: 79 LSCLDKW--MAP-------KKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPL 129
L+ +D+W +AP K +P + S P+ +V + S WNFP+ L+
Sbjct: 92 LASIDRWCGLAPELLQTSAKNTSIPFIALQQS----LVPYPLVGVISPWNFPLTLSXIDT 147
Query: 130 IGAIAAGNTVMLKPSELAVECASFL---AETIPLYLDCKAIKVTNGGVDVCEQLLQQKWN 186
I A+ AG V++KPSE+A + L T+P D + GG + L+ +
Sbjct: 148 IPALLAGCAVVVKPSEIAPRFVAPLLXALNTVPELRDV--LIFVEGGGETGANLINYV-D 204
Query: 187 KIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFAS 246
+ FTGS G V AA+ P LELGGK PAI+ L S ++++ I+ G +
Sbjct: 205 FVCFTGSVATGREVAETAARRFIPAYLELGGKDPAIV--LESA-NLELATSAILWGAVVN 261
Query: 247 CNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKL 305
GQ C+ ++ I V + L + P + +I II E +
Sbjct: 262 -TGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDH 320
Query: 306 LKDPLVADAIVHGGLLDKE---NLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQE 362
+ D + A++H G +E + PT+ + ++ TEE FGPI P+ +++E
Sbjct: 321 ILDAVEKGAVIHCGGKVEELGGGWWCRPTVXTNVNHSXKVXTEETFGPIXPVXPFPDVEE 380
Query: 363 SIEFINSRPKPL--AIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLC-----DVLPFG 415
++ N L A++A ++DE K + ++G++ ND + + F
Sbjct: 381 AVYLANDTIYGLSAAVFAGSEDEALK--VARQLNAGAISINDAALTAXXHEGEKNAFNFS 438
Query: 416 GVGQSGIGRYHGHYSFETFSHEKAIMQRSFFLELEPRYPPW 456
G+G S +G ++ + +++F ++ PW
Sbjct: 439 GLGGSRVG---------AAGLKRFLRKQAFLIKTNSTSDPW 470
>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|B Chain B, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|C Chain C, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|D Chain D, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
Length = 517
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 191/458 (41%), Gaps = 35/458 (7%)
Query: 3 AAMGEIEDKLAELRQTFRSGITKSVAWRKNQ--LRALIELLQDNEDKIFKALHQDLGKHP 60
A + +++ +A ++ F +G+ + R L L ++++ +++++ D G
Sbjct: 71 AQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVY 130
Query: 61 VETYRDEIGLIKKSAKYALSCLDKWM--------APKKRRLPLLFFPASGEVVSEPFGVV 112
+ +G+ ++ +Y DK A R L L EP GV
Sbjct: 131 TLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTL--------TKKEPVGVC 182
Query: 113 LICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAE-TIPLYLDCKAIKVTN 171
I WN+P+ + +AAGNTV++KP+++ A AE T+ + + +
Sbjct: 183 GIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILP 242
Query: 172 GGVDVCEQLLQQKWN--KIFFTGSPRVGSIVM-SAAAKHLTPVTLELGGKCPAILDTLSS 228
G + Q L + KI FTGS VG +M S A ++ V+L LGGK P I + +
Sbjct: 243 GSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLALGGKSPLI---IFA 299
Query: 229 PLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSK 288
D+ V+ + F + G+ C+ + VE+ ++ + ++K NP +
Sbjct: 300 DCDLNKAVQMGMSSVFFN-KGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERD 358
Query: 289 SISRIIN-EYHFERLRKLLKDPLVADA--IVHGGLLDKENLFIEPTILLDPPLDAEIMTE 345
+ N E H +L + + + A + G + + F +PT+ D I E
Sbjct: 359 TNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKE 418
Query: 346 EIFGPILPIITL--NNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDT 403
E FGPI+ I ++ + N+ LA FT+D + +G++ N
Sbjct: 419 ESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFIN-- 476
Query: 404 LVQQLCDV-LPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
DV PFGG QSG G+ G + + K +
Sbjct: 477 -TYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513
>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHP|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHQ|A Chain A, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|B Chain B, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|C Chain C, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|D Chain D, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 191/458 (41%), Gaps = 35/458 (7%)
Query: 3 AAMGEIEDKLAELRQTFRSGITKSVAWRKNQ--LRALIELLQDNEDKIFKALHQDLGKHP 60
A + +++ +A ++ F +G+ + R L L ++++ +++++ D G
Sbjct: 71 AQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVY 130
Query: 61 VETYRDEIGLIKKSAKYALSCLDKWM--------APKKRRLPLLFFPASGEVVSEPFGVV 112
+ +G+ ++ +Y DK A R L L EP GV
Sbjct: 131 TLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTL--------TKKEPVGVC 182
Query: 113 LICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAE-TIPLYLDCKAIKVTN 171
I WN+P+ + +AAGNTV++KP+++ A AE T+ + + +
Sbjct: 183 GIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILP 242
Query: 172 GGVDVCEQLLQQKWN--KIFFTGSPRVGSIVM-SAAAKHLTPVTLELGGKCPAILDTLSS 228
G + Q L + KI FTGS VG +M S A ++ V+LELGGK P I + +
Sbjct: 243 GSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLI---IFA 299
Query: 229 PLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSK 288
D+ V+ + F + G+ + + VE+ ++ + ++K NP +
Sbjct: 300 DCDLNKAVQMGMSSVFFN-KGENAIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERD 358
Query: 289 SISRIIN-EYHFERLRKLLKDPLVADA--IVHGGLLDKENLFIEPTILLDPPLDAEIMTE 345
+ N E H +L + + + A + G + + F +PT+ D I E
Sbjct: 359 TNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKE 418
Query: 346 EIFGPILPIITL--NNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDT 403
E FGPI+ I ++ + N+ LA FT+D + +G++ N
Sbjct: 419 ESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFIN-- 476
Query: 404 LVQQLCDV-LPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
DV PFGG QSG G+ G + + K +
Sbjct: 477 -TYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513
>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GO0|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
Length = 517
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 191/458 (41%), Gaps = 35/458 (7%)
Query: 3 AAMGEIEDKLAELRQTFRSGITKSVAWRKNQ--LRALIELLQDNEDKIFKALHQDLGKHP 60
A + +++ +A ++ F +G+ + R L L ++++ +++++ D G
Sbjct: 71 AQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVY 130
Query: 61 VETYRDEIGLIKKSAKYALSCLDKWM--------APKKRRLPLLFFPASGEVVSEPFGVV 112
+ +G+ ++ +Y DK A R L L EP GV
Sbjct: 131 TLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTL--------TKKEPVGVC 182
Query: 113 LICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAE-TIPLYLDCKAIKVTN 171
I WN+P+ + +AAGNTV++KP+++ A AE T+ + + +
Sbjct: 183 GIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILP 242
Query: 172 GGVDVCEQLLQQKWN--KIFFTGSPRVGSIVM-SAAAKHLTPVTLELGGKCPAILDTLSS 228
G + Q L + KI FTGS VG +M S A ++ V+LELGGK P I + +
Sbjct: 243 GSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLI---IFA 299
Query: 229 PLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSK 288
D+ V+ + F + G+ + + VE+ ++ + ++K NP +
Sbjct: 300 DCDLNKAVQMGMSSVFFN-KGENSIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERD 358
Query: 289 SISRIIN-EYHFERLRKLLKDPLVADA--IVHGGLLDKENLFIEPTILLDPPLDAEIMTE 345
+ N E H +L + + + A + G + + F +PT+ D I E
Sbjct: 359 TNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKE 418
Query: 346 EIFGPILPIITL--NNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDT 403
E FGPI+ I ++ + N+ LA FT+D + +G++ N
Sbjct: 419 ESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFIN-- 476
Query: 404 LVQQLCDV-LPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
DV PFGG QSG G+ G + + K +
Sbjct: 477 -TYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513
>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|B Chain B, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|C Chain C, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|D Chain D, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
Length = 517
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/458 (23%), Positives = 190/458 (41%), Gaps = 35/458 (7%)
Query: 3 AAMGEIEDKLAELRQTFRSGITKSVAWRKNQ--LRALIELLQDNEDKIFKALHQDLGKHP 60
A + +++ +A ++ F +G+ + R L L ++++ +++++ D G
Sbjct: 71 AQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVY 130
Query: 61 VETYRDEIGLIKKSAKYALSCLDKWM--------APKKRRLPLLFFPASGEVVSEPFGVV 112
+ +G+ ++ +Y DK A R L L EP GV
Sbjct: 131 TLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTL--------TKKEPVGVC 182
Query: 113 LICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAE-TIPLYLDCKAIKVTN 171
I WN+P+ + +AAGNTV++KP+++ A AE T+ + + +
Sbjct: 183 GIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILP 242
Query: 172 GGVDVCEQLLQQKWN--KIFFTGSPRVGSIVM-SAAAKHLTPVTLELGGKCPAILDTLSS 228
G + Q L + KI FTGS VG +M S A ++ V+L LGGK P I + +
Sbjct: 243 GSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLALGGKSPLI---IFA 299
Query: 229 PLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSK 288
D+ V+ + F + G+ + + VE+ ++ + ++K NP +
Sbjct: 300 DCDLNKAVQMGMSSVFFN-KGENAIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERD 358
Query: 289 SISRIIN-EYHFERLRKLLKDPLVADA--IVHGGLLDKENLFIEPTILLDPPLDAEIMTE 345
+ N E H +L + + + A + G + + F +PT+ D I E
Sbjct: 359 TNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKE 418
Query: 346 EIFGPILPIITL--NNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDT 403
E FGPI+ I ++ + N+ LA FT+D + +G++ N
Sbjct: 419 ESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFIN-- 476
Query: 404 LVQQLCDV-LPFGGVGQSGIGRYHGHYSFETFSHEKAI 440
DV PFGG QSG G+ G + + K +
Sbjct: 477 -TYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513
>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
pdb|3HAZ|B Chain B, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
Length = 1001
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 153/347 (44%), Gaps = 30/347 (8%)
Query: 110 GVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSE----LAVECASFLAET-IP---LY 161
GV + S WNFP+ + L + A+ AGN+V+ KP+E +A E + L E IP LY
Sbjct: 651 GVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALY 710
Query: 162 LDCKAIKVTNGGVDVCEQLLQQKWNKIFFTGSPRVG-SIVMSAAAKH--LTPVTLELGGK 218
L VT G + FTGS V SI + AAK + P+ E GG
Sbjct: 711 L------VTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGI 764
Query: 219 CPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKK 278
I D + P + ++ F S GQ C + + V++ A +IE + ++
Sbjct: 765 NAMIADATALPEQV---ADDVVTSAFRSA-GQRCSALRLLFVQEDVADRMIEMVAGAARE 820
Query: 279 FYGENPKD-SKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPP 337
+P D + + +I+ +RL + + +A +H E F+ P I
Sbjct: 821 LKIGDPSDVATHVGPVIDVEAKQRLDAHIAR-MKTEARLHFAGPAPEGCFVAPHIF--EL 877
Query: 338 LDAEIMTEEIFGPILPIITLN--NIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS 395
+A +TEE+FGPIL ++ N++ + I L + ++ + + I+
Sbjct: 878 TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQV 937
Query: 396 GSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHG--HYSFETFSHEKAI 440
G++ N ++ + V PFGG G SG G G HY F+ E+ +
Sbjct: 938 GNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHY-LARFATEQTV 983
>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating
Glyceraldehyde-3- Phosphate Dehydrogenase
Length = 501
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 152/350 (43%), Gaps = 21/350 (6%)
Query: 102 GEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPS-----ELAVECASFLAE 156
G V EP GVV + +N+P+ A+ + + GN V++KPS A+ + L
Sbjct: 151 GLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDA 210
Query: 157 TIPLYLDCKAIKVTN-GGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLEL 215
P AI + N G + + + + + FTGS VG V+ + +EL
Sbjct: 211 GFP----PDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VKQYVMEL 264
Query: 216 GGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTT 275
GG PAI+ D+ + +I G + S GQ C + +L E+ L+E +
Sbjct: 265 GGGDPAIV---LEDADLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKR 320
Query: 276 IKKFYGENPKD-SKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLDKENLFIEPTILL 334
+ +P+D + + +I+ + + ++D + V G +++PT++
Sbjct: 321 LSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPTLVE 380
Query: 335 DPP---LDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS 391
P D + E+F P+ + + ++ ++IE N RP L F +D ++ V
Sbjct: 381 APADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVR 440
Query: 392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441
G++ ND + + PFGG +SG+ R Y+ E + K I+
Sbjct: 441 LLEVGAIYIND-MPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIV 489
>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 152/350 (43%), Gaps = 21/350 (6%)
Query: 102 GEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPS-----ELAVECASFLAE 156
G V EP GVV + +N+P+ A+ + + GN V++KPS A+ + L
Sbjct: 151 GLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDA 210
Query: 157 TIPLYLDCKAIKVTN-GGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLEL 215
P AI + N G + + + + + FTGS VG V+ + +EL
Sbjct: 211 GFP----PDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VKQYVMEL 264
Query: 216 GGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTT 275
GG PAI+ D+ + +I G + S GQ C + +L E+ L+E +
Sbjct: 265 GGGDPAIV---LEDADLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKR 320
Query: 276 IKKFYGENPKD-SKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLDKENLFIEPTILL 334
+ +P+D + + +I+ + + ++D + V G +++PT++
Sbjct: 321 LSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPTLVE 380
Query: 335 DPP---LDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS 391
P D + E+F P+ + + ++ ++IE N RP L F +D ++ V
Sbjct: 381 APADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVR 440
Query: 392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441
G++ ND + + PFGG +SG+ R Y+ E + K I+
Sbjct: 441 LLEVGAIYIND-MPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIV 489
>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXP|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXQ|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXR|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXT|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-phosphorylating
Glyceraldehyde-3-phosphate Dehydrogenase (gapn) From
Thermoproteus Tenax
pdb|1UXU|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 151/350 (43%), Gaps = 21/350 (6%)
Query: 102 GEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPS-----ELAVECASFLAE 156
G V EP GVV + +N+P+ A+ + + GN V++KPS A+ + L
Sbjct: 151 GLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDA 210
Query: 157 TIPLYLDCKAIKVTN-GGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLEL 215
P AI + N G + + + + + FTGS VG V+ + +EL
Sbjct: 211 GFP----PDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VKQYVMEL 264
Query: 216 GGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTT 275
GG PAI+ D+ + +I G + S GQ C + +L E+ L+E +
Sbjct: 265 GGGDPAIV---LEDADLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKR 320
Query: 276 IKKFYGENPKD-SKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLDKENLFIEPTILL 334
+ +P+D + + +I+ + + ++D + V G +++PT +
Sbjct: 321 LSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPTFVE 380
Query: 335 DPP---LDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS 391
P D + E+F P+ + + ++ ++IE N RP L F +D ++ V
Sbjct: 381 APADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVR 440
Query: 392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441
G++ ND + + PFGG +SG+ R Y+ E + K I+
Sbjct: 441 LLEVGAIYIND-MPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIV 489
>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa.
pdb|3JU8|B Chain B, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 176/418 (42%), Gaps = 38/418 (9%)
Query: 28 AWRKNQLRALIELLQ-------DNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALS 80
AW + L IELL+ D++ + + ++ GK E+ + + K A +
Sbjct: 57 AWARRPLEQRIELLERFAATLKSRADELARVIGEETGKPLWESATEVTSXVNKVAISVQA 116
Query: 81 CLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVM 140
++ ++ PL A+ + +P GVV + +NFP +L ++ A+ AGN V+
Sbjct: 117 FRER---TGEKSGPLA--DATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVV 171
Query: 141 LKPSELAVECASF-LAETIPLYLDCKAIKVTNGGVDVCEQLLQQKW-NKIFFTGSPRVGS 198
KPSEL + A L I L + + GG + L + + +FFTGS R G+
Sbjct: 172 FKPSELTPKVAELTLKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGN 231
Query: 199 IVMSA-AAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDY 257
++ S + + LE GG P +++ ++ D+ V II F S GQ C
Sbjct: 232 LLHSQFGGQPQKILALEXGGNNPLVVEEVA---DLDAAVYTIIQSAFISA-GQRCTCARR 287
Query: 258 ILVEK-----KFAATLIESLKTTIKKFYGENPK--DSKSISRIINEYHFERLRKLL---K 307
+LV + A L+ T + E P IS E+ + L+
Sbjct: 288 LLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFXGAVISLSAAEHLLKAQEHLIGKGA 347
Query: 308 DPLVADAI-VHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEF 366
PL+A + G L + P I LD AE EE FGP+L +I ++ +I
Sbjct: 348 QPLLAXTQPIDGAAL------LTPGI-LDVSAVAERPDEEFFGPLLQVIRYSDFAAAIRE 400
Query: 367 INSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGR 424
N+ LA + +Q + + +G + +N L PFGG+G SG R
Sbjct: 401 ANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSA-PFGGIGASGNHR 457
>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|B Chain B, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|C Chain C, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|D Chain D, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
Length = 486
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 144/344 (41%), Gaps = 13/344 (3%)
Query: 108 PFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAI 167
P GVV + +NFP+ + AIA GNT +LKPSE L E K +
Sbjct: 141 PIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGV 200
Query: 168 -KVTNGGVDVCEQLLQQ-KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDT 225
V G DV +L+ + I F GS VG V +++L V G K I+
Sbjct: 201 FNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAKNHTIV-- 258
Query: 226 LSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKF-YGENP 284
+ +++ TV I+G F S G+ C+ + VE+ A + L+ + G
Sbjct: 259 -LNDANLEDTVTNIVGAAFGSA-GERCMACAVVTVEEGIADEFMAKLQEKVADIKIGNGL 316
Query: 285 KDSKSISRIINEYHFERLRKLLKDPLVADA-IVHGGL--LDKENLFIEPTILLDPPLDAE 341
D + +I E + +R ++ L A +V G + + F+ PTI + +
Sbjct: 317 DDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMT 376
Query: 342 IMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFN 401
I +EIF P+L +I + N++E+IE N FT + + +G L N
Sbjct: 377 IWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGIN 436
Query: 402 DTLVQQLCDVLPFGGVGQSGIGRYH--GHYSFETFSHEKAIMQR 443
+ + PF G S G H G S + ++ +K + R
Sbjct: 437 LGVPAPMA-FFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTAR 479
>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|B Chain B, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|C Chain C, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|D Chain D, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|E Chain E, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|F Chain F, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|G Chain G, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|H Chain H, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
Length = 510
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 154/355 (43%), Gaps = 36/355 (10%)
Query: 108 PFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSEL----AVECASFLAETIPLYLD 163
P G+V I +A+NFP+ + A+ GN + K + +V +AE +
Sbjct: 155 PVGLVGIITAFNFPVAVYGWNNAIALTCGNVCLWKGAPTTPLTSVAVTKIVAEVLEQNNL 214
Query: 164 CKAI-KVTNGGVDVCEQLLQ-QKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPA 221
AI +T GG D+ + + ++ + + FTGS VG +V + LELGG
Sbjct: 215 PGAICSMTCGGADIGTAMAKDERVDLLSFTGSTHVGKMVAMMVQERFGRKLLELGGNNAI 274
Query: 222 ILDTLSSPLDIKVTVKRIIGGKFASCN--GQVCVGVDYILVEKKFAATLIESLKTTIKKF 279
I+ D+ + V + FAS GQ C +++ + ++E + K+
Sbjct: 275 IV---FEDADLNLVVPSAV---FASVGTAGQRCTTTRRLMLHESVHDAVVERIAKAYKQV 328
Query: 280 YGENPKDSKSI------SRIINEYHFERLRKLLKDPLVADAIVHGG-LLDKENLFIEPTI 332
+P D ++ + +++Y L + + +V GG ++D+ ++EPTI
Sbjct: 329 RIGDPWDPSTLYGPLHTKQAVDQY----LAAIEQAKQQGGTLVCGGKVMDRPGNYVEPTI 384
Query: 333 LLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKD--ETFKKQIV 390
+ DA I+ E F PIL ++ +E+ + N + L+ FTKD F+
Sbjct: 385 ITGLAHDAPIVHTETFVPILYVLKFKTEEEAFAWNNEVQQGLSSSIFTKDLGRVFRWLGP 444
Query: 391 SGTSSGSLIFNDTLVQQLCDV-LPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444
G+ G I N + ++ FGG +G GR G S++ + M+RS
Sbjct: 445 KGSDCG--IVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDSWKQY------MRRS 491
>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
pdb|4F9I|B Chain B, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
Length = 1026
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 137/344 (39%), Gaps = 39/344 (11%)
Query: 107 EPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI-PLYLDCK 165
EP GV + + WNFP+ +++ AI GN V+ KPS + L E L
Sbjct: 665 EPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEG 724
Query: 166 AIKVTNGGVDVCEQLL--QQKWNKIFFTGSPRVGSIVMSAAAK------HLTPVTLELGG 217
T G V L + I FTGS G ++ AAK ++ + E+GG
Sbjct: 725 VFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGG 784
Query: 218 KCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYIL----VEKKFAATLIESLK 273
K I+D + + V ++ F GQ C ++ V KF L+ K
Sbjct: 785 KNAIIIDDDAD---LDEAVPHVLYSAFG-FQGQKCSACSRVIVLDAVYDKFIERLVSMAK 840
Query: 274 TTIKKFYGENP-------KDSKSISRIINEYHFERLRK---LLKDPLVADAIVHGGLLDK 323
T K E+P D K++ + I EY R+ L + P+ A
Sbjct: 841 AT-KVGPSEDPANYMGAVADDKAM-KSIKEYAEIGKREGHVLYESPVPAG---------- 888
Query: 324 ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDE 383
E F+ TI+ + I EEIFGP+L ++ + ++IE+ NS L F++
Sbjct: 889 EGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSP 948
Query: 384 TFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHG 427
+ G+L N L + PFGG SG+G G
Sbjct: 949 EHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAG 992
>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|B Chain B, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|C Chain C, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|D Chain D, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|E Chain E, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|F Chain F, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|G Chain G, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|H Chain H, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
Length = 500
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 154/368 (41%), Gaps = 31/368 (8%)
Query: 94 PLLFFPASGEVVSE---PFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLK----PSEL 146
P+L SG + E P G+V I +A+NFP+ + A+ GN + K S +
Sbjct: 140 PILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLI 199
Query: 147 AVECASFLAETIPLYLDCKAI-KVTNGGVDVCEQLLQ-QKWNKIFFTGSPRVGSIVMSAA 204
+V +A+ + AI +T GG D+ + + ++ N + FTGS +VG V
Sbjct: 200 SVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMV 259
Query: 205 AKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCN--GQVCVGVDYILVEK 262
+ LELGG I D+ + V + FA+ GQ C + + +
Sbjct: 260 QERFGRSLLELGGNNAIIA---FEDADLSLVVPSAL---FAAVGTAGQRCTTARRLFIHE 313
Query: 263 KFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFER--LRKLLKDPLVADAIVHGG- 319
++ LK + NP D + ++ L + + +V+GG
Sbjct: 314 SIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGK 373
Query: 320 LLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAF 379
++D+ ++EPTI+ DA I E F PIL + N +E + N + L+ F
Sbjct: 374 VMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIF 433
Query: 380 TKD--ETFKKQIVSGTSSGSLIFNDTLVQQLCDV-LPFGGVGQSGIGRYHGHYSFETFSH 436
TKD F+ G+ G I N + ++ FGG +G GR G +++ +
Sbjct: 434 TKDLGRIFRWLGPKGSDCG--IVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQY-- 489
Query: 437 EKAIMQRS 444
M+RS
Sbjct: 490 ----MRRS 493
>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|B Chain B, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|C Chain C, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|D Chain D, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|E Chain E, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|F Chain F, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|G Chain G, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|H Chain H, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
Length = 521
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 163/429 (37%), Gaps = 27/429 (6%)
Query: 30 RKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPK 89
R ++LL DN +++ + L ++ GK T D G I + + C P
Sbjct: 88 RARVFXKFVQLLNDNXNELAEXLSREHGK----TIDDAKGDIVRGLEV---CEFVIGIPH 140
Query: 90 KRRLPLLFFPASG---EVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSEL 146
++ G + +P G+ + +NFP + AIA GN +LKPSE
Sbjct: 141 LQKSEFTEGAGPGIDXYSIRQPVGIGAGITPFNFPGXIPXWXFAPAIACGNAFILKPSER 200
Query: 147 AVECASFLAE-TIPLYLDCKAIKVTNGGVDVCEQLLQQ-KWNKIFFTGSPRVGSIVMSAA 204
LAE I L + V NG + +L + F GS + V A
Sbjct: 201 DPSVPIRLAELXIEAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTA 260
Query: 205 AKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYIL-VEKK 263
A + G K I+ D+ +IG + S G+ C + + V ++
Sbjct: 261 AXNGKRAQCFGGAKNHXII---XPDADLDQAANALIGAGYGSA-GERCXAISVAVPVGEE 316
Query: 264 FAATLIESLKTTIKKFY-GENPKDSKSISRIINEYHFERLRKLLKDPLVADA--IVHG-- 318
A LI+ L ++ G + ++ + +R+R L+ + A +V G
Sbjct: 317 TANRLIDKLVPXVESLRIGPYTDEKADXGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRD 376
Query: 319 -GLLDKEN-LFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAI 376
L EN FI + D D +I EIFGP+L ++ N +E++ +
Sbjct: 377 FKLQGYENGHFIGGCLFDDVTPDXDIYKTEIFGPVLSVVRARNYEEALSLPXKHEYGNGV 436
Query: 377 YAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIG--RYHGHYSFETF 434
+T+D + S + G + N + L FGG S G HG S + +
Sbjct: 437 AIYTRDGDAARDFASRINIGXVGVNVPIPVPLA-YHSFGGWKSSSFGDLNQHGTDSIKFW 495
Query: 435 SHEKAIMQR 443
+ K I R
Sbjct: 496 TRTKTITSR 504
>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
Length = 566
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 147/398 (36%), Gaps = 63/398 (15%)
Query: 68 IGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPF-GVVLICSAWNFPI---N 123
I + +AKYA+ + + P+ P++ V G V S +NF N
Sbjct: 170 IDFFRFNAKYAVEL--------EGQQPISVPPSTNSTVYRGLEGFVAAISPFNFTAIGGN 221
Query: 124 LALEPLIGAIAAGNTVMLKPSELAVECA-----------------SFLAETIPLYLDCKA 166
LA P + GN V+ KPS+ A+ + F+ PL+ D
Sbjct: 222 LAGAPAL----MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDT-- 275
Query: 167 IKVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTL--ELGGKCPAI-L 223
V E L I FTGS + A++L L G+C
Sbjct: 276 -------VTSSEHLC-----GINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNF 323
Query: 224 DTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGEN 283
+ D++ V + F GQ C + V + L + +
Sbjct: 324 HFVHRSADVESVVSGTLRSAF-EYGGQKCSACSRLYVPHSLWPQIKGRLLEEHSRIKVGD 382
Query: 284 PKD--SKSISRIINEYHFERLRKLLKDPLVADA--IVHGGLLDKE-NLFIEPTILLDPPL 338
P + S +I+ F R++K L+ + + I+ GG D F+EP I+
Sbjct: 383 PAEDFGTFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDP 442
Query: 339 DAEIMTEEIFGPILPIITL--NNIQESIEFINSRPK---PLAIYAFTKDETFKKQIVSGT 393
IM EEIFGP+L + + +E+++ ++S A+++ KD + V
Sbjct: 443 QEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRN 502
Query: 394 SSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHG--HY 429
++G+ ND + PFGG SG G HY
Sbjct: 503 AAGNFYINDKSTGSIVGQQPFGGARASGTNDKPGGPHY 540
>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
Length = 566
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 10/149 (6%)
Query: 291 SRIINEYHFERLRKLLKDPLVADA--IVHGGLLDKE-NLFIEPTILLDPPLDAEIMTEEI 347
S +I+ F R++K L+ + + I+ GG D F+EP I+ IM EEI
Sbjct: 392 SAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEEI 451
Query: 348 FGPILPIITL--NNIQESIEFINSRPK---PLAIYAFTKDETFKKQIVSGTSSGSLIFND 402
FGP+L + + +E+++ ++S A+++ KD + V ++G+ ND
Sbjct: 452 FGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNAAGNFYIND 511
Query: 403 TLVQQLCDVLPFGGVGQSGIGRYHG--HY 429
+ PFGG SG G HY
Sbjct: 512 KSTGSIVGQQPFGGARASGTNDKPGGPHY 540
>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
Length = 566
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 10/149 (6%)
Query: 291 SRIINEYHFERLRKLLKDPLVADA--IVHGGLLDKE-NLFIEPTILLDPPLDAEIMTEEI 347
S +I+ F R++K L+ + + I+ GG D F+EP I+ IM EEI
Sbjct: 392 SAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEEI 451
Query: 348 FGPILPIITL--NNIQESIEFINSRPK---PLAIYAFTKDETFKKQIVSGTSSGSLIFND 402
FGP+L + + +E+++ ++S A+++ KD + V ++G+ ND
Sbjct: 452 FGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNAAGNFYIND 511
Query: 403 TLVQQLCDVLPFGGVGQSGIGRYHG--HY 429
+ PFGG SG G HY
Sbjct: 512 KSTGSIVGQQPFGGARASGTNDKPGGPHY 540
>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9J|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9K|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9K|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9L|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|3V9L|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|4E3X|A Chain A, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
pdb|4E3X|B Chain B, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
Length = 563
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 131/355 (36%), Gaps = 54/355 (15%)
Query: 110 GVVLICSAWNFPI---NLALEPLIGAIAAGNTVMLKPSELAVECA--------------- 151
G V S +NF NLA P + GN V+ KPS+ A+ +
Sbjct: 202 GFVAAISPFNFTAIGGNLAGAPAL----MGNVVLWKPSDTAMLASYAVYRILREAGLPPN 257
Query: 152 --SFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLT 209
F+ P + D V E L I FTGS + A++L
Sbjct: 258 IIQFVPADGPTFGDT---------VTSSEHLC-----GINFTGSVPTFKHLWRQVAQNLD 303
Query: 210 PVTL--ELGGKCPAI-LDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAA 266
L G+C + S D+ V + F GQ C + V K
Sbjct: 304 RFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAF-EYGGQKCSACSRLYVPKSLWP 362
Query: 267 TLIESLKTTIKKFYGENPKD--SKSISRIINEYHFERLRKLLKDPLVADA--IVHGGLLD 322
+ L + +P + S +I+ F R++K L+ + + I+ GG +
Sbjct: 363 QIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCN 422
Query: 323 KE-NLFIEPTILLDPPLDAEIMTEEIFGPILPIITL--NNIQESIEFINSRPK-PLAIYA 378
+ ++EP I+ IM EEIFGP+L + + +E+++ ++S L
Sbjct: 423 ESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAV 482
Query: 379 FTKDETFKKQIVS--GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHG--HY 429
F +D+ ++ ++G+ ND + PFGG SG G HY
Sbjct: 483 FAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGGPHY 537
>pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3V4C|B Chain B, Crystal Structure Of A Semialdehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 528
Score = 35.0 bits (79), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 69/186 (37%), Gaps = 19/186 (10%)
Query: 104 VVSEPFGVVLICSAWNFPI--NLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161
+V P G V + A NFP+ + A A+AAG V++K +AE +
Sbjct: 165 LVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAA 224
Query: 162 LDCKAIK------VTNGGVDVCEQLLQQKWNK-IFFTGSPRVGSIVMSAAAKHLTPVTL- 213
+ + + G DV L+Q K + FTGS G + A P+
Sbjct: 225 IRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFF 284
Query: 214 -ELGGKCPAILDTLSSPLDIKV-TVKRIIGGKFASCNGQVCVGVDYILV-----EKKFAA 266
ELG P L L L + T+ + G GQ C +V +F
Sbjct: 285 GELGSVNPXFL--LPEALKARAETLGQGWAGSLTXGAGQFCTNPGIAVVIEGADADRFTT 342
Query: 267 TLIESL 272
+E+L
Sbjct: 343 AAVEAL 348
>pdb|2NRJ|A Chain A, Crystal Structure Of Hemolysin Binding Component From
Bacillus Cereus
Length = 346
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 163 DCKAIKVTNGGVDVCEQLLQQKWN--KIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCP 220
D K ++ G V+ +QL +N K G P +G I++ A +L GK
Sbjct: 181 DQKRLEEVLGSVNYYKQLESDGFNVXKGAILGLPIIGGIIVGVARDNL--------GKLE 232
Query: 221 AILDTLSSPLDIKVTVKRIIGGKFASCN 248
+L L +D KVT+ R++G +++ N
Sbjct: 233 PLLAELRQTVDYKVTLNRVVGVAYSNIN 260
>pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y53|B Chain B, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 119/279 (42%), Gaps = 40/279 (14%)
Query: 103 EVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYL 162
V+S GV L +A+NFP E A+ +G V++KP A A + +
Sbjct: 146 HVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKP---ATATAWLTQRMVADVV 202
Query: 163 DC-----KAIKVTNGGVDVCEQLLQQ--KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLEL 215
D A+ + G LL Q ++ + FTGS +AA P ++
Sbjct: 203 DAGILPPGALSIICGS---SAGLLDQIRSFDVVSFTGSAD------TAATLRAHPAFVQR 253
Query: 216 GGKCPAILDTLSSPL----------DIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFA 265
G + D+L+S + + +K ++ + +GQ C + V +
Sbjct: 254 GARLNVQADSLNSAILCADATPDTPAFDLFIKEVV-REMTVKSGQKCTAIRRAFVPEAAL 312
Query: 266 ATLIESLKTTIKKFYGENPK-DSKSISRIINEYHFER----LRKLLKDPLVADAIVHGGL 320
++E+LK + K NP+ D+ + +++ +E + L ++ ++A L
Sbjct: 313 EPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPL 372
Query: 321 LDKE-NLF--IEPTI-LLDPPLDAEIMTE-EIFGPILPI 354
+D + N+ + P + +++ P +A ++ + E+FGP+ +
Sbjct: 373 IDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASV 411
>pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y52|B Chain B, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 31.6 bits (70), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 119/279 (42%), Gaps = 40/279 (14%)
Query: 103 EVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYL 162
V+S GV L +A+NFP E A+ +G V++KP A A + +
Sbjct: 146 HVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKP---ATATAWLTQRMVADVV 202
Query: 163 DC-----KAIKVTNGGVDVCEQLLQQ--KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLEL 215
D A+ + G LL Q ++ + FTGS +AA P ++
Sbjct: 203 DAGILPPGALSIICGS---SAGLLDQIRSFDVVSFTGSAD------TAATLRAHPAFVQR 253
Query: 216 GGKCPAILDTLSSPL----------DIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFA 265
G + D+L+S + + +K ++ + +GQ C + V +
Sbjct: 254 GARLNVEADSLNSAILCADATPDTPAFDLFIKEVV-REMTVKSGQKCTAIRRAFVPEAAL 312
Query: 266 ATLIESLKTTIKKFYGENPK-DSKSISRIINEYHFER----LRKLLKDPLVADAIVHGGL 320
++E+LK + K NP+ D+ + +++ +E + L ++ ++A L
Sbjct: 313 EPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPL 372
Query: 321 LDKE-NLF--IEPTI-LLDPPLDAEIMTE-EIFGPILPI 354
+D + N+ + P + +++ P +A ++ + E+FGP+ +
Sbjct: 373 IDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASV 411
>pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
pdb|2VRO|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
Length = 532
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 119/279 (42%), Gaps = 40/279 (14%)
Query: 103 EVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYL 162
V+S GV L +A+NFP E A+ +G V++KP A A + +
Sbjct: 144 HVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKP---ATATAWLTQRMVADVV 200
Query: 163 DC-----KAIKVTNGGVDVCEQLLQQ--KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLEL 215
D A+ + G LL Q ++ + FTGS +AA P ++
Sbjct: 201 DAGILPPGALSIICGS---SAGLLDQIRSFDVVSFTGSAD------TAATLRAHPAFVQR 251
Query: 216 GGKCPAILDTLSSPL----------DIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFA 265
G + D+L+S + + +K ++ + +GQ C + V +
Sbjct: 252 GARLNVEADSLNSAILCADATPDTPAFDLFIKEVV-REMTVKSGQKCTAIRRAFVPEAAL 310
Query: 266 ATLIESLKTTIKKFYGENPK-DSKSISRIINEYHFER----LRKLLKDPLVADAIVHGGL 320
++E+LK + K NP+ D+ + +++ +E + L ++ ++A L
Sbjct: 311 EPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPL 370
Query: 321 LDKE-NLF--IEPTI-LLDPPLDAEIMTE-EIFGPILPI 354
+D + N+ + P + +++ P +A ++ + E+FGP+ +
Sbjct: 371 IDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASV 409
>pdb|1XRS|B Chain B, Crystal Structure Of Lysine 5,6-Aminomutase In Complex
With Plp, Cobalamin, And 5'-Deoxyadenosine
Length = 262
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 15/107 (14%)
Query: 329 EPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPL-AIYAFTKDETFKK 387
EP++++ LD E ++G + + N I +E +NS + + K+ +K
Sbjct: 63 EPSVVMQQSLDEEFTFFVVYGNFVQSVNYNEIH--VEAVNSEILSMEETDEYIKENIGRK 120
Query: 388 QIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETF 434
+V G S+G+ D + ++ G Y GHY E +
Sbjct: 121 IVVVGASTGT----DAHTVGIDAIMNMKG--------YAGHYGLERY 155
>pdb|3K9D|A Chain A, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|B Chain B, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|C Chain C, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|D Chain D, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
Length = 464
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 70/172 (40%), Gaps = 29/172 (16%)
Query: 105 VSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY--- 161
V+ P GVV P + + + +I AGN+++ P A++ + ET+ +
Sbjct: 105 VAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKA---ILETVRIISEA 161
Query: 162 ----------LDCKAIKVTNGGVDVCEQLLQQKWNKIFF-TGSPRVGSIVMSAAAKHLTP 210
+ C + G +QL++ K + TG GS ++ AA TP
Sbjct: 162 AEKAGCPKGAISCMTVPTIQG----TDQLMKHKDTAVILATG----GSAMVKAAYSSGTP 213
Query: 211 VTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEK 262
G PA ++ + +I VK I+ K NG +C ++VE+
Sbjct: 214 AIGVGPGNGPAFIERSA---NIPRAVKHILDSKTFD-NGTICASEQSVVVER 261
>pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y51|B Chain B, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 118/279 (42%), Gaps = 40/279 (14%)
Query: 103 EVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYL 162
V+S GV L +A+NFP A+ +G V++KP A A + +
Sbjct: 146 HVLSPTRGVALFINAFNFPSWGLWAKAAPALLSGVPVIVKP---ATATAWLTQRMVADVV 202
Query: 163 DCK-----AIKVTNGGVDVCEQLLQQ--KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLEL 215
D A+ + G LL Q ++ + FTGS +AA P ++
Sbjct: 203 DAGILPPGALSIICGS---SAGLLDQIRSFDVVSFTGSAD------TAATLRAHPAFVQR 253
Query: 216 GGKCPAILDTLSSPL----------DIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFA 265
G + D+L+S + + +K ++ + +GQ C + V +
Sbjct: 254 GARLNVEADSLNSAILCADATPDTPAFDLFIKEVVR-EMTVKSGQKCTAIRRAFVPEAAL 312
Query: 266 ATLIESLKTTIKKFYGENPK-DSKSISRIINEYHFER----LRKLLKDPLVADAIVHGGL 320
++E+LK + K NP+ D+ + +++ +E + L ++ ++A L
Sbjct: 313 EPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPL 372
Query: 321 LDKE-NLF--IEPTI-LLDPPLDAEIMTE-EIFGPILPI 354
+D + N+ + P + +++ P +A ++ + E+FGP+ +
Sbjct: 373 IDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASV 411
>pdb|2EIG|A Chain A, Lotus Tetragonolobus Seed Lectin (Isoform)
pdb|2EIG|B Chain B, Lotus Tetragonolobus Seed Lectin (Isoform)
pdb|2EIG|C Chain C, Lotus Tetragonolobus Seed Lectin (Isoform)
pdb|2EIG|D Chain D, Lotus Tetragonolobus Seed Lectin (Isoform)
Length = 234
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 156 ETIPLYLDCKAIKVTNGGVDVCE--QLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTL 213
++ P D K+++ ++ G+DV L WN++ +GS +I+ + K LT V
Sbjct: 120 DSHPNVWDPKSLRSSHIGIDVNSIMSLKAVNWNRV--SGSLEKATIIYDSDTKILTVVMT 177
Query: 214 ELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASC 247
G+ + T+S +D+K + + F++
Sbjct: 178 HQNGQ----ITTISQEIDLKTVLPEKVSVGFSAT 207
>pdb|4AHC|A Chain A, Crystal Structure Of An Evolved Replicating Dna Polymerase
pdb|4AHC|B Chain B, Crystal Structure Of An Evolved Replicating Dna Polymerase
pdb|4AIL|C Chain C, Crystal Structure Of An Evolved Replicating Dna Polymerase
Length = 775
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 9/62 (14%)
Query: 236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIIN 295
VK+I G + +G++ VD VEKKF I T+ K Y E+P+D +I +
Sbjct: 51 VKKITGER----HGKIVRIVDVEKVEKKFLGKPI-----TVWKLYLEHPQDQPTIREKVR 101
Query: 296 EY 297
E+
Sbjct: 102 EH 103
>pdb|2ECF|A Chain A, Crystal Structure Of Dipeptidyl Aminopeptidase Iv From
Stenotrophomonas Maltophilia
Length = 741
Score = 28.5 bits (62), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 28 AWRKNQLRALIELLQDNEDKIFKALHQDLG--KHPVETYRD 66
+W N IEL + N +KI + DL KHP YR+
Sbjct: 442 SWSNNSTPPQIELFRANGEKIATLVENDLADPKHPYARYRE 482
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.139 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,268,671
Number of Sequences: 62578
Number of extensions: 601793
Number of successful extensions: 1646
Number of sequences better than 100.0: 98
Number of HSP's better than 100.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1299
Number of HSP's gapped (non-prelim): 100
length of query: 484
length of database: 14,973,337
effective HSP length: 103
effective length of query: 381
effective length of database: 8,527,803
effective search space: 3249092943
effective search space used: 3249092943
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)