Query         038617
Match_columns 484
No_of_seqs    235 out of 1351
Neff          8.6 
Searched_HMMs 46136
Date          Fri Mar 29 12:52:00 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038617.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038617hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 PLN02174 aldehyde dehydrogenas 100.0  7E-104  1E-108  817.0  54.6  475    4-482     8-483 (484)
  2 PLN02203 aldehyde dehydrogenas 100.0  8E-101  2E-105  797.2  54.6  481    3-484     3-484 (484)
  3 PTZ00381 aldehyde dehydrogenas 100.0 5.6E-99  1E-103  786.7  53.7  462    3-470     4-467 (493)
  4 KOG2456 Aldehyde dehydrogenase 100.0 4.6E-99  1E-103  720.0  39.0  469    8-483     4-474 (477)
  5 COG1012 PutA NAD-dependent ald 100.0 1.9E-96  4E-101  761.3  49.9  432    2-444    32-469 (472)
  6 PRK11241 gabD succinate-semial 100.0   1E-95  2E-100  761.7  50.1  431    2-442    44-480 (482)
  7 PLN02419 methylmalonate-semial 100.0 1.9E-95  4E-100  765.9  51.8  433    2-444   147-590 (604)
  8 KOG2451 Aldehyde dehydrogenase 100.0 6.8E-96  1E-100  692.1  40.2  433    3-445    58-500 (503)
  9 KOG2450 Aldehyde dehydrogenase 100.0 4.3E-96  9E-101  725.2  36.6  433    2-444    54-496 (501)
 10 TIGR03374 ABALDH 1-pyrroline d 100.0 4.4E-94 9.5E-99  749.0  49.5  432    2-442    34-471 (472)
 11 cd07136 ALDH_YwdH-P39616 Bacil 100.0 1.4E-93   3E-98  738.0  51.2  445   10-462     2-446 (449)
 12 PLN02766 coniferyl-aldehyde de 100.0 3.3E-93 7.2E-98  747.0  50.3  433    2-444    54-495 (501)
 13 PRK13968 putative succinate se 100.0 6.5E-93 1.4E-97  739.0  49.6  431    2-443    25-460 (462)
 14 PRK09406 gabD1 succinic semial 100.0 6.8E-93 1.5E-97  737.9  49.5  433    2-442    19-456 (457)
 15 cd07117 ALDH_StaphAldA1 Unchar 100.0 1.5E-92 3.3E-97  738.7  50.2  431    2-442    34-473 (475)
 16 cd07140 ALDH_F1L_FTFDH 10-form 100.0 1.6E-92 3.6E-97  739.1  49.6  435    2-443    39-485 (486)
 17 PLN02278 succinic semialdehyde 100.0 2.1E-92 4.6E-97  741.0  50.4  433    2-444    58-496 (498)
 18 cd07113 ALDH_PADH_NahF Escheri 100.0 2.4E-92 5.2E-97  739.3  50.2  436    2-443    33-476 (477)
 19 cd07559 ALDH_ACDHII_AcoD-like  100.0 4.1E-92 8.9E-97  737.0  49.8  432    2-443    34-479 (480)
 20 PLN02466 aldehyde dehydrogenas 100.0 7.3E-92 1.6E-96  739.7  50.8  433    2-444    91-532 (538)
 21 PLN02467 betaine aldehyde dehy 100.0 1.1E-91 2.4E-96  735.0  51.7  435    2-443    41-488 (503)
 22 cd07137 ALDH_F3FHI Plant aldeh 100.0 8.1E-92 1.8E-96  724.3  49.8  428   10-441     3-431 (432)
 23 PLN02315 aldehyde dehydrogenas 100.0   9E-92   2E-96  735.0  49.5  433    2-444    52-495 (508)
 24 PRK13252 betaine aldehyde dehy 100.0 9.7E-92 2.1E-96  736.7  49.5  433    2-444    40-481 (488)
 25 TIGR03216 OH_muco_semi_DH 2-hy 100.0 1.2E-91 2.7E-96  734.7  50.1  436    2-443    32-480 (481)
 26 cd07132 ALDH_F3AB Aldehyde deh 100.0 2.5E-91 5.4E-96  723.5  51.3  440   10-457     2-443 (443)
 27 cd07135 ALDH_F14-YMR110C Sacch 100.0 1.9E-91 4.2E-96  722.3  49.0  433    3-441     2-435 (436)
 28 cd07097 ALDH_KGSADH-YcbD Bacil 100.0 2.1E-91 4.5E-96  732.1  49.5  431    2-441    33-472 (473)
 29 PRK13473 gamma-aminobutyraldeh 100.0 2.3E-91   5E-96  732.5  49.8  434    2-444    35-474 (475)
 30 TIGR01780 SSADH succinate-semi 100.0 1.9E-91   4E-96  727.6  48.3  427    2-438    15-448 (448)
 31 cd07107 ALDH_PhdK-like Nocardi 100.0 3.7E-91 8.1E-96  727.4  49.5  431    2-443    15-455 (456)
 32 cd07142 ALDH_F2BC Arabidosis a 100.0 4.9E-91 1.1E-95  729.2  49.3  430    2-441    37-475 (476)
 33 TIGR02299 HpaE 5-carboxymethyl 100.0 4.9E-91 1.1E-95  731.9  49.3  432    2-444    34-478 (488)
 34 cd07110 ALDH_F10_BADH Arabidop 100.0 5.6E-91 1.2E-95  726.5  49.2  433    2-441    15-455 (456)
 35 cd07100 ALDH_SSADH1_GabD1 Myco 100.0 3.9E-91 8.4E-96  721.4  47.2  423    8-441     1-428 (429)
 36 cd07101 ALDH_SSADH2_GabD2 Myco 100.0 7.5E-91 1.6E-95  724.7  49.6  433    2-441    14-453 (454)
 37 TIGR01237 D1pyr5carbox2 delta- 100.0 6.7E-91 1.5E-95  732.5  49.7  434    2-443    65-510 (511)
 38 cd07086 ALDH_F7_AASADH-like NA 100.0 7.5E-91 1.6E-95  728.2  49.7  433    2-443    31-476 (478)
 39 cd07085 ALDH_F6_MMSDH Methylma 100.0 8.7E-91 1.9E-95  728.3  49.7  433    2-443    34-477 (478)
 40 cd07130 ALDH_F7_AASADH NAD+-de 100.0 9.5E-91 2.1E-95  726.2  49.7  432    2-443    30-472 (474)
 41 cd07124 ALDH_PutA-P5CDH-RocA D 100.0 9.7E-91 2.1E-95  732.1  49.8  433    2-443    65-511 (512)
 42 cd07099 ALDH_DDALDH Methylomon 100.0 1.3E-90 2.8E-95  724.0  50.0  435    2-441    14-452 (453)
 43 cd07116 ALDH_ACDHII-AcoD Ralst 100.0 1.3E-90 2.8E-95  726.6  49.3  430    2-443    34-478 (479)
 44 cd07089 ALDH_CddD-AldA-like Rh 100.0 1.4E-90   3E-95  722.7  49.1  435    1-441    14-458 (459)
 45 cd07106 ALDH_AldA-AAD23400 Str 100.0 1.4E-90   3E-95  721.6  48.7  427    2-441    15-445 (446)
 46 cd07148 ALDH_RL0313 Uncharacte 100.0 1.8E-90 3.8E-95  721.2  49.3  432    2-441    17-454 (455)
 47 cd07120 ALDH_PsfA-ACA09737 Pse 100.0 1.7E-90 3.7E-95  719.6  48.7  428    2-441    15-454 (455)
 48 cd07151 ALDH_HBenzADH NADP+-de 100.0   2E-90 4.2E-95  723.2  49.5  431    2-443    28-464 (465)
 49 cd07141 ALDH_F1AB_F2_RALDH1 NA 100.0   2E-90 4.3E-95  725.6  49.7  431    2-442    40-480 (481)
 50 cd07145 ALDH_LactADH_F420-Bios 100.0 2.3E-90 5.1E-95  721.8  48.9  432    2-441    17-455 (456)
 51 cd07123 ALDH_F4-17_P5CDH Delta 100.0 4.1E-90 8.9E-95  727.0  49.8  434    2-443    65-519 (522)
 52 PRK09407 gabD2 succinic semial 100.0 1.2E-89 2.6E-94  724.4  53.1  436    2-444    50-492 (524)
 53 cd07090 ALDH_F9_TMBADH NAD+-de 100.0 4.8E-90   1E-94  719.7  49.0  431    2-443    15-455 (457)
 54 cd07152 ALDH_BenzADH NAD-depen 100.0 4.9E-90 1.1E-94  716.9  48.7  428    2-441     9-442 (443)
 55 cd07143 ALDH_AldA_AN0554 Asper 100.0 7.4E-90 1.6E-94  719.5  49.9  432    2-443    40-480 (481)
 56 cd07118 ALDH_SNDH Gluconobacte 100.0 5.3E-90 1.2E-94  717.4  48.6  430    2-441    15-453 (454)
 57 cd07133 ALDH_CALDH_CalB Conife 100.0 9.3E-90   2E-94  710.6  50.0  427   10-441     2-433 (434)
 58 PRK03137 1-pyrroline-5-carboxy 100.0   6E-90 1.3E-94  725.8  49.3  433    2-443    69-513 (514)
 59 PRK09847 gamma-glutamyl-gamma- 100.0 7.2E-90 1.6E-94  721.2  49.6  432    2-443    53-492 (494)
 60 cd07144 ALDH_ALD2-YMR170C Sacc 100.0 8.7E-90 1.9E-94  721.8  49.6  432    2-443    41-483 (484)
 61 cd07083 ALDH_P5CDH ALDH subfam 100.0 1.1E-89 2.4E-94  722.2  50.1  435    2-443    51-499 (500)
 62 cd07109 ALDH_AAS00426 Uncharac 100.0 9.2E-90   2E-94  717.0  49.2  430    2-441    15-453 (454)
 63 cd07119 ALDH_BADH-GbsA Bacillu 100.0 1.1E-89 2.5E-94  721.0  50.2  432    2-444    31-474 (482)
 64 cd07115 ALDH_HMSADH_HapE Pseud 100.0 8.7E-90 1.9E-94  717.0  48.9  432    2-443    15-452 (453)
 65 TIGR01804 BADH glycine betaine 100.0 8.4E-90 1.8E-94  719.3  48.7  427    2-438    31-467 (467)
 66 TIGR01236 D1pyr5carbox1 delta- 100.0 9.8E-90 2.1E-94  723.6  49.0  435    2-444    65-521 (533)
 67 cd07098 ALDH_F15-22 Aldehyde d 100.0 2.6E-89 5.6E-94  715.7  50.7  438    2-443    14-464 (465)
 68 cd07139 ALDH_AldA-Rv0768 Mycob 100.0 1.6E-89 3.4E-94  718.5  48.7  430    2-441    32-470 (471)
 69 cd07102 ALDH_EDX86601 Uncharac 100.0 2.2E-89 4.7E-94  714.6  49.5  430    2-441    14-451 (452)
 70 cd07131 ALDH_AldH-CAJ73105 Unc 100.0 2.6E-89 5.7E-94  718.0  50.1  433    2-443    33-476 (478)
 71 cd07091 ALDH_F1-2_Ald2-like AL 100.0 2.1E-89 4.5E-94  718.0  48.9  430    2-441    37-475 (476)
 72 cd07112 ALDH_GABALDH-PuuC Esch 100.0 2.1E-89 4.6E-94  714.4  48.1  430    2-441    20-461 (462)
 73 cd07138 ALDH_CddD_SSP0762 Rhod 100.0   2E-89 4.3E-94  716.3  47.9  425    2-441    32-465 (466)
 74 cd07150 ALDH_VaniDH_like Pseud 100.0 2.4E-89 5.1E-94  714.1  48.4  429    2-441    17-450 (451)
 75 cd07134 ALDH_AlkH-like Pseudom 100.0 6.4E-89 1.4E-93  704.1  49.2  428   10-441     2-432 (433)
 76 cd07088 ALDH_LactADH-AldA Esch 100.0 7.7E-89 1.7E-93  713.1  49.7  430    2-441    31-467 (468)
 77 cd07147 ALDH_F21_RNP123 Aldehy 100.0 6.1E-89 1.3E-93  710.8  48.5  431    2-442    17-452 (452)
 78 PRK09457 astD succinylglutamic 100.0 8.2E-89 1.8E-93  713.3  49.1  431    2-444    33-471 (487)
 79 cd07092 ALDH_ABALDH-YdcW Esche 100.0 1.2E-88 2.7E-93  708.5  49.7  431    2-441    15-449 (450)
 80 cd07108 ALDH_MGR_2402 Magnetos 100.0 8.4E-89 1.8E-93  710.3  48.3  429    2-441    15-456 (457)
 81 cd07094 ALDH_F21_LactADH-like  100.0   1E-88 2.2E-93  709.4  48.7  431    1-441    16-452 (453)
 82 cd07111 ALDH_F16 Aldehyde dehy 100.0 1.4E-88 2.9E-93  708.5  48.2  418    2-439    55-477 (480)
 83 cd07095 ALDH_SGSD_AstD N-succi 100.0 1.1E-88 2.4E-93  701.9  46.8  422    7-440     1-429 (431)
 84 PLN00412 NADP-dependent glycer 100.0 2.6E-88 5.7E-93  709.8  49.2  432    2-444    49-488 (496)
 85 cd07125 ALDH_PutA-P5CDH Delta( 100.0 2.5E-88 5.4E-93  714.1  49.3  433    2-444    65-508 (518)
 86 TIGR01722 MMSDH methylmalonic  100.0 3.3E-88 7.2E-93  708.1  49.8  432    2-443    34-476 (477)
 87 TIGR03250 PhnAcAld_DH putative 100.0 3.1E-88 6.7E-93  706.3  48.8  429    2-443    35-471 (472)
 88 cd07105 ALDH_SaliADH Salicylal 100.0 3.2E-88   7E-93  700.7  47.9  422    7-441     1-431 (432)
 89 cd07087 ALDH_F3-13-14_CALDH-li 100.0 7.4E-88 1.6E-92  695.9  49.2  424   10-441     2-425 (426)
 90 cd07114 ALDH_DhaS Uncharacteri 100.0 5.8E-88 1.2E-92  704.0  48.7  430    2-441    15-456 (457)
 91 PF00171 Aldedh:  Aldehyde dehy 100.0 2.8E-89 6.1E-94  714.8  36.3  429    2-440    25-462 (462)
 92 TIGR03240 arg_catab_astD succi 100.0 1.4E-87 3.1E-92  704.0  49.0  431    2-444    31-469 (484)
 93 cd07104 ALDH_BenzADH-like ALDH 100.0 2.2E-87 4.7E-92  696.0  48.2  424    7-441     1-430 (431)
 94 cd07093 ALDH_F8_HMSADH Human a 100.0 2.7E-87 5.9E-92  699.4  49.2  430    2-441    15-454 (455)
 95 cd07103 ALDH_F5_SSADH_GabD Mit 100.0 3.5E-87 7.6E-92  698.1  49.0  430    2-441    15-450 (451)
 96 cd07128 ALDH_MaoC-N N-terminal 100.0 2.5E-87 5.5E-92  700.7  46.3  429    5-441    35-502 (513)
 97 PRK10090 aldehyde dehydrogenas 100.0 4.6E-87   1E-91  683.1  44.9  400   34-443     1-407 (409)
 98 cd07146 ALDH_PhpJ Streptomyces 100.0 1.1E-86 2.4E-91  691.4  48.3  426    2-441    17-450 (451)
 99 cd07149 ALDH_y4uC Uncharacteri 100.0 4.1E-86 8.9E-91  690.8  48.0  430    2-441    17-452 (453)
100 TIGR01238 D1pyr5carbox3 delta- 100.0   4E-86 8.6E-91  691.9  46.7  416    2-439    70-500 (500)
101 TIGR02278 PaaN-DH phenylacetic 100.0 4.7E-86   1E-90  709.6  48.2  430    3-442    34-495 (663)
102 cd07082 ALDH_F11_NP-GAPDH NADP 100.0 9.2E-86   2E-90  690.3  49.2  431    2-442    34-472 (473)
103 PRK11903 aldehyde dehydrogenas 100.0 5.2E-86 1.1E-90  692.8  47.2  431    4-441    38-505 (521)
104 PRK11904 bifunctional proline  100.0 3.1E-85 6.8E-90  726.5  50.7  433    2-444   581-1027(1038)
105 PRK11563 bifunctional aldehyde 100.0 8.8E-85 1.9E-89  704.4  46.3  429    6-443    40-508 (675)
106 PRK11809 putA trifunctional tr 100.0 1.7E-82 3.7E-87  709.9  47.6  416    2-439   678-1111(1318)
107 cd07126 ALDH_F12_P5CDH Delta(1 100.0 5.4E-82 1.2E-86  655.3  46.7  411    2-427    30-473 (489)
108 PRK11905 bifunctional proline  100.0 5.6E-82 1.2E-86  707.8  48.5  421    2-444   586-1019(1208)
109 cd07129 ALDH_KGSADH Alpha-Keto 100.0   1E-80 2.2E-85  646.7  43.7  416    8-437     1-449 (454)
110 cd07084 ALDH_KGSADH-like ALDH  100.0 2.7E-80 5.8E-85  641.0  42.2  417    9-439     2-439 (442)
111 cd07078 ALDH NAD(P)+ dependent 100.0 1.5E-79 3.2E-84  638.2  47.6  424    9-441     1-431 (432)
112 KOG2454 Betaine aldehyde dehyd 100.0 4.3E-81 9.3E-86  590.8  32.1  465    1-470    81-564 (583)
113 cd07121 ALDH_EutE Ethanolamine 100.0 1.8E-79 3.8E-84  630.3  36.8  388    5-427     3-411 (429)
114 PRK15398 aldehyde dehydrogenas 100.0 1.6E-78 3.4E-83  627.9  37.6  403    2-443    32-453 (465)
115 cd07081 ALDH_F20_ACDH_EutE-lik 100.0 3.9E-78 8.4E-83  620.0  39.3  407    8-442     1-438 (439)
116 TIGR02288 PaaN_2 phenylacetic  100.0 1.6E-76 3.5E-81  618.5  44.8  425    8-443    86-546 (551)
117 cd07127 ALDH_PAD-PaaZ Phenylac 100.0 2.9E-75 6.4E-80  610.5  45.3  426    7-443    85-546 (549)
118 TIGR02518 EutH_ACDH acetaldehy 100.0 1.6E-74 3.5E-79  601.4  43.4  411    3-444     5-445 (488)
119 PRK00197 proA gamma-glutamyl p 100.0 2.6E-75 5.6E-80  599.0  33.5  387    5-444     3-412 (417)
120 cd07079 ALDH_F18-19_ProA-GPR G 100.0 3.3E-75 7.1E-80  596.2  32.8  381   10-443     2-405 (406)
121 cd07122 ALDH_F20_ACDH Coenzyme 100.0 1.6E-74 3.5E-79  592.1  35.8  369    8-405     1-391 (436)
122 PLN02418 delta-1-pyrroline-5-c 100.0 1.4E-73 3.1E-78  616.3  40.5  385    6-446   294-699 (718)
123 PRK13805 bifunctional acetalde 100.0   2E-73 4.3E-78  632.4  40.4  411    3-444     9-451 (862)
124 COG4230 Delta 1-pyrroline-5-ca 100.0 1.6E-70 3.4E-75  540.5  34.5  416    3-440   147-575 (769)
125 cd07077 ALDH-like NAD(P)+-depe 100.0 8.1E-70 1.8E-74  556.9  33.8  373   13-441     1-396 (397)
126 cd06534 ALDH-SF NAD(P)+-depend 100.0 2.7E-68 5.8E-73  542.1  41.7  362   14-441     2-366 (367)
127 TIGR01092 P5CS delta l-pyrroli 100.0 1.9E-68 4.1E-73  577.9  40.6  384    7-446   287-693 (715)
128 TIGR00407 proA gamma-glutamyl  100.0 3.7E-68   8E-73  539.7  34.3  374   15-438     1-398 (398)
129 KOG2452 Formyltetrahydrofolate 100.0   3E-66 6.4E-71  500.5  27.5  415    2-443   455-880 (881)
130 KOG2455 Delta-1-pyrroline-5-ca 100.0 3.3E-65 7.1E-70  490.2  29.6  444    3-455    93-558 (561)
131 KOG2453 Aldehyde dehydrogenase 100.0 8.8E-64 1.9E-68  465.3  22.9  432    3-444    52-494 (507)
132 COG0014 ProA Gamma-glutamyl ph 100.0 4.5E-39 9.8E-44  310.8  25.5  392    6-445     3-413 (417)
133 cd07080 ALDH_Acyl-CoA-Red_LuxC 100.0 6.9E-36 1.5E-40  307.3  28.6  363    4-395     3-388 (422)
134 KOG4165 Gamma-glutamyl phospha 100.0 2.8E-30   6E-35  241.3  23.1  385    8-445     2-407 (433)
135 PF05893 LuxC:  Acyl-CoA reduct  99.8 1.6E-15 3.4E-20  154.5  33.8  304  102-436    81-398 (399)
136 KOG2449 Methylmalonate semiald  99.5 6.9E-14 1.5E-18  115.7   7.9  145  265-418     8-155 (157)
137 PF07368 DUF1487:  Protein of u  99.1 6.6E-10 1.4E-14  101.2  13.0  164  219-405     6-171 (215)
138 PRK11905 bifunctional proline   98.3 1.5E-06 3.2E-11   99.8   9.6   97   97-208  1067-1164(1208)
139 PF00815 Histidinol_dh:  Histid  97.3    0.18 3.9E-06   51.4  25.1  333   26-439    10-375 (412)
140 PRK13770 histidinol dehydrogen  96.9    0.57 1.2E-05   47.7  29.7  329   30-440    21-380 (416)
141 TIGR00069 hisD histidinol dehy  96.7    0.67 1.5E-05   46.9  23.0  258   98-440    78-359 (393)
142 PRK12447 histidinol dehydrogen  96.7    0.83 1.8E-05   46.7  27.9  325   30-440    22-385 (426)
143 PRK11809 putA trifunctional tr  95.9   0.048   1E-06   63.7  10.8  103   97-212  1176-1278(1318)
144 cd06572 Histidinol_dh Histidin  95.8     2.5 5.5E-05   42.9  26.7  261   98-440    82-363 (390)
145 COG0141 HisD Histidinol dehydr  95.3     3.9 8.5E-05   41.6  25.7  286   73-439    79-385 (425)
146 PRK00877 hisD bifunctional his  94.7     5.9 0.00013   40.7  29.7  334   27-440    26-390 (425)
147 PRK13769 histidinol dehydrogen  94.7     5.4 0.00012   40.1  28.4  247   98-439    83-338 (368)
148 PLN02926 histidinol dehydrogen  92.8      13 0.00029   38.2  29.8  286   73-439    82-392 (431)
149 COG4230 Delta 1-pyrroline-5-ca  74.2      17 0.00038   38.3   8.7  105   98-216   633-737 (769)
150 TIGR01319 glmL_fam conserved h  47.5      42 0.00091   35.0   6.0  135  164-309    98-241 (463)
151 PF01513 NAD_kinase:  ATP-NAD k  46.2      41 0.00088   32.9   5.5   63  180-245    72-135 (285)
152 PF13941 MutL:  MutL protein     42.4      58  0.0013   34.1   6.1  131  166-309   104-245 (457)
153 PF03295 Pox_TAA1:  Poxvirus tr  41.9      47   0.001   24.0   3.7   28  343-370     9-36  (63)
154 PF06945 DUF1289:  Protein of u  37.1      35 0.00076   23.8   2.5   23   20-42     28-50  (51)
155 PF13376 OmdA:  Bacteriocin-pro  35.2      37  0.0008   24.8   2.5   35    5-39      7-41  (63)
156 PF07045 DUF1330:  Protein of u  34.9      87  0.0019   22.9   4.5   23  350-372    39-61  (65)
157 cd00532 MGS-like MGS-like doma  34.3      98  0.0021   25.4   5.3   74  134-215    23-106 (112)
158 TIGR00222 panB 3-methyl-2-oxob  32.3 4.7E+02    0.01   25.3  10.3  159  111-277    16-195 (263)
159 cd01390 HMGB-UBF_HMG-box HMGB-  31.5      88  0.0019   22.4   4.1   35   13-47     30-64  (66)
160 cd01422 MGS Methylglyoxal synt  31.1      95  0.0021   25.7   4.7   43  173-215    59-108 (115)
161 COG5470 Uncharacterized conser  28.5 1.1E+02  0.0023   24.6   4.1   22  352-373    55-76  (96)
162 PF07085 DRTGG:  DRTGG domain;   25.8      92   0.002   25.1   3.6   47  162-208    38-85  (105)
163 PF09011 HMG_box_2:  HMG-box do  25.6   1E+02  0.0022   23.0   3.6   37   13-49     34-70  (73)
164 PF00505 HMG_box:  HMG (high mo  25.3 1.1E+02  0.0024   22.1   3.8   35   15-49     32-66  (69)
165 COG2237 Predicted membrane pro  25.0      57  0.0012   32.7   2.6  113  167-292    47-163 (364)
166 cd01424 MGS_CPS_II Methylglyox  25.0 1.2E+02  0.0026   24.6   4.2   72  136-215    26-102 (110)
167 smart00398 HMG high mobility g  24.7 1.7E+02  0.0036   21.0   4.6   35   15-49     33-67  (70)
168 PF03795 YCII:  YCII-related do  22.8 1.4E+02  0.0031   23.3   4.1   28  345-373    54-81  (95)
169 cd01388 SOX-TCF_HMG-box SOX-TC  22.4 1.6E+02  0.0036   21.8   4.2   35   13-47     31-65  (72)
170 PF11181 YflT:  Heat induced st  20.9 1.9E+02  0.0041   23.3   4.6   44  354-397     3-50  (103)
171 COG1438 ArgR Arginine represso  20.4 3.8E+02  0.0082   23.5   6.4   46  124-173    80-126 (150)
172 KOG2450 Aldehyde dehydrogenase  20.2      58  0.0013   34.2   1.6  108  296-405    81-195 (501)

No 1  
>PLN02174 aldehyde dehydrogenase family 3 member H1
Probab=100.00  E-value=6.8e-104  Score=817.02  Aligned_cols=475  Identities=50%  Similarity=0.883  Sum_probs=441.3

Q ss_pred             CHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHH
Q 038617            4 AMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLD   83 (484)
Q Consensus         4 ~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~   83 (484)
                      ...|+++++++|++||++|+++++++|.++|++++++|++|+++|++++++|+|||..++...|+..+++.++++++.++
T Consensus         8 ~~~~v~~av~~a~~af~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~~~~   87 (484)
T PLN02174          8 GAADASILVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALKQLK   87 (484)
T ss_pred             CHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999999999999999999999999876799999999999999999


Q ss_pred             HhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccccC
Q 038617           84 KWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLD  163 (484)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~alp  163 (484)
                      +|.++..........+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.+++|
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~~lp  167 (484)
T PLN02174         88 NWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQYLD  167 (484)
T ss_pred             HHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence            88775443222222234568899999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccceeeccCChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHhh
Q 038617          164 CKAIKVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGK  243 (484)
Q Consensus       164 ~g~v~~v~g~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~~  243 (484)
                      +|++|+++|+.+.+..|+++++|+|+||||+.+|+.|++.+++++||+++|||||||+||++   |||++.|++.+++++
T Consensus       168 ~gvv~vv~G~~~~~~~l~~~~vd~V~FTGS~~~G~~I~~~aa~~l~~v~LELGGk~p~iV~~---dADl~~Aa~~i~~g~  244 (484)
T PLN02174        168 SSAVRVVEGAVTETTALLEQKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDS---DTDLKVTVRRIIAGK  244 (484)
T ss_pred             CCEEEEEECChHHHHHHhcccCCEEEEECChHHHHHHHHHHHhcCCcEEEecCCCCeEEEcC---CCCHHHHHHHHHHHH
Confidence            99999999977778888875599999999999999999999999999999999999999999   999999999999999


Q ss_pred             c-ccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCCCcC
Q 038617          244 F-ASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLD  322 (484)
Q Consensus       244 ~-~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~~~  322 (484)
                      | . |+||.|++++|+|||++++|+|+++|+++++++++|+|.+++++||++++.+++++.++|+++.+++++++||..+
T Consensus       245 f~~-n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~ga~~~~GG~~~  323 (484)
T PLN02174        245 WGC-NNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPMESKDMSRIVNSTHFDRLSKLLDEKEVSDKIVYGGEKD  323 (484)
T ss_pred             hhC-CCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcccCCcCCCCCHHHHHHHHHHHHHHHcCCEEEECCCcC
Confidence            8 8 9999999999999999999999999999999999999955889999999999999999999986678999999765


Q ss_pred             CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEEECC
Q 038617          323 KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFND  402 (484)
Q Consensus       323 ~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~  402 (484)
                      .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||+
T Consensus       324 ~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~l~aG~v~IN~  403 (484)
T PLN02174        324 RENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVND  403 (484)
T ss_pred             CCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHcCCcceEEECC
Confidence            56899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecCcCCCCCCCCCCchHHHHHHHHHhhhhhHHHHHHhhcc
Q 038617          403 TLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSFFLELEPRYPPWNDFKMKFLRLAYDFDYFNLLLLLLGL  482 (484)
Q Consensus       403 ~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  482 (484)
                      +..+...+.+||||+|.||+|+++|.+|+++||+.|+|+++..+.+.+++||||+++|.++++.+++..+|++++-+.|+
T Consensus       404 ~~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~~~~~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~  483 (484)
T PLN02174        404 IAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYRSLFGDSAVRYPPYSRGKLRLLKALVDSNIFDIFKVLLGL  483 (484)
T ss_pred             CcCCCCCCCCCCCCcCccccCccchHHHHHHhcceEEEEECCccCcccccCCCCChHHHHHHHHHHhhchhhhhhccccC
Confidence            87654457899999999999999999999999999999988776788999999999999999999987888877666554


No 2  
>PLN02203 aldehyde dehydrogenase
Probab=100.00  E-value=7.8e-101  Score=797.16  Aligned_cols=481  Identities=68%  Similarity=1.159  Sum_probs=446.8

Q ss_pred             CCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHH
Q 038617            3 AAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCL   82 (484)
Q Consensus         3 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~   82 (484)
                      +..+|+++++++|++||+.|+.+++.+|.++|++++++|++++++|+++++.|+|||..++...|+..+++.++++++.+
T Consensus         3 ~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~~~~   82 (484)
T PLN02203          3 APGETLEGSVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLALSNL   82 (484)
T ss_pred             CCHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            56789999999999999999999999999999999999999999999999999999999997669999999999999999


Q ss_pred             HHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhcccc
Q 038617           83 DKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYL  162 (484)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~al  162 (484)
                      +++.++.....+....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.+++.+++
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~~l  162 (484)
T PLN02203         83 KKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIPKYL  162 (484)
T ss_pred             HHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhC
Confidence            88876432111111223466889999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccceeeccCChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHh
Q 038617          163 DCKAIKVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGG  242 (484)
Q Consensus       163 p~g~v~~v~g~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~  242 (484)
                      |+|++|+++|+.++++.|+.|++|.|+||||+++|+.|++.++++++|+++|+|||||+||++...|||++.|++.++++
T Consensus       163 P~gvv~vv~g~~~~~~~l~~~~vd~v~fTGS~~~G~~v~~~aa~~l~~v~lElGGknp~iV~~d~~daDl~~aa~~i~~~  242 (484)
T PLN02203        163 DSKAVKVIEGGPAVGEQLLQHKWDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSRDTKVAVNRIVGG  242 (484)
T ss_pred             CcCEEEEEeCCHHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEEccCCCCCCHHHHHHHHHHH
Confidence            99999999998889999999999999999999999999999999999999999999999999611149999999999999


Q ss_pred             hc-ccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCCCc
Q 038617          243 KF-ASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLL  321 (484)
Q Consensus       243 ~~-~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~~  321 (484)
                      +| . |+||.|++++|+|||++++|+|+++|++++.++++|+|.+.+++||++++.+++++.++++++.+++++++||..
T Consensus       243 ~f~~-~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~~~~~~~gg~~  321 (484)
T PLN02203        243 KWGS-CAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRESKSMARILNKKHFQRLSNLLKDPRVAASIVHGGSI  321 (484)
T ss_pred             hccc-CCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcCCCcCCCCCHHHHHHHHHHHHHHHhCCeEEeCCCc
Confidence            99 5 799999999999999999999999999999999999995457899999999999999999998766889999876


Q ss_pred             CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEEEC
Q 038617          322 DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFN  401 (484)
Q Consensus       322 ~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN  401 (484)
                      +.+|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+.++++++++|.|+||
T Consensus       322 ~~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~V~IN  401 (484)
T PLN02203        322 DEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSSGSVTFN  401 (484)
T ss_pred             CCCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEC
Confidence            55699999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecCcCCCCCCCCCCchHHHHHHHHHhhhhhHHHHHHhhc
Q 038617          402 DTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSFFLELEPRYPPWNDFKMKFLRLAYDFDYFNLLLLLLG  481 (484)
Q Consensus       402 ~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  481 (484)
                      ++..+...+.+||||+|.||+|+++|.+++++||+.|+|+.++.+.+.+++||||+++|.++||.++|+.+|.+.+-++|
T Consensus       402 ~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~l~~ft~~k~v~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  481 (484)
T PLN02203        402 DAIIQYACDSLPFGGVGESGFGRYHGKYSFDTFSHEKAVLRRSLLTEFEFRYPPWNDFKLGFLRLVYRFDYFGLLLLLLG  481 (484)
T ss_pred             CcccccCCCCCCCCCcCcccCCccccHHHHHHhcceeEEEEcCccCcccccCCCCChHHHHHHHHHHhhcchhhhccccc
Confidence            88655456789999999999999999999999999999998887678899999999999999999999999999999999


Q ss_pred             ccC
Q 038617          482 LKR  484 (484)
Q Consensus       482 ~~~  484 (484)
                      ++|
T Consensus       482 ~~~  484 (484)
T PLN02203        482 LKR  484 (484)
T ss_pred             cCC
Confidence            997


No 3  
>PTZ00381 aldehyde dehydrogenase family protein; Provisional
Probab=100.00  E-value=5.6e-99  Score=786.68  Aligned_cols=462  Identities=47%  Similarity=0.827  Sum_probs=431.6

Q ss_pred             CCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHH
Q 038617            3 AAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCL   82 (484)
Q Consensus         3 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~   82 (484)
                      ++.+|+++++++|++||++|++++.++|.++|++++++|++++++|++++++|+||+..|+...|+..++..++++++++
T Consensus         4 ~~~~~i~~av~~a~~a~~~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~~~~   83 (493)
T PTZ00381          4 DNPEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLKHL   83 (493)
T ss_pred             CCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            67899999999999999999999999999999999999999999999999999999999998779999999999999999


Q ss_pred             HHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhcccc
Q 038617           83 DKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYL  162 (484)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~al  162 (484)
                      ++|++++....+....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.+++.+++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~~~l  163 (493)
T PTZ00381         84 DEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKYL  163 (493)
T ss_pred             HHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHhC
Confidence            99987654322211223467889999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccceeeccCChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHh
Q 038617          163 DCKAIKVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGG  242 (484)
Q Consensus       163 p~g~v~~v~g~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~  242 (484)
                      |+|++++++|+.+.+..|+++++|+|+||||+.+|+.|+++++++++|+++|+|||||+||++   |||++.|++.++++
T Consensus       164 p~~~v~vv~g~~~~~~~l~~~~~d~i~FTGS~~vG~~V~~~aa~~l~pv~lElGGk~p~iV~~---dAdl~~Aa~~i~~g  240 (493)
T PTZ00381        164 DPSYVRVIEGGVEVTTELLKEPFDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDK---SCNLKVAARRIAWG  240 (493)
T ss_pred             CcCEEEEecCCHHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEEcCCCCceEEcC---CCCHHHHHHHHHHH
Confidence            999999999988889999998999999999999999999999999999999999999999999   99999999999999


Q ss_pred             hcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCCCcC
Q 038617          243 KFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLD  322 (484)
Q Consensus       243 ~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~~~  322 (484)
                      +|. |+||.|++++++|||++++|+|+++|++.+.+++++++++++++||++++.+.+++.+++++  +++++++||..+
T Consensus       241 ~~~-naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~g~~~~~~~~~gpli~~~~~~ri~~~i~~--~ga~~~~gG~~~  317 (493)
T PTZ00381        241 KFL-NAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELIKD--HGGKVVYGGEVD  317 (493)
T ss_pred             HHh-hcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHhCCCCccCCCcCCCCCHHHHHHHHHHHHh--CCCcEEECCCcC
Confidence            999 99999999999999999999999999999999886666888999999999999999999974  378899999776


Q ss_pred             CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEEECC
Q 038617          323 KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFND  402 (484)
Q Consensus       323 ~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~  402 (484)
                      ..++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||+
T Consensus       318 ~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~sG~v~IN~  397 (493)
T PTZ00381        318 IENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSGAVVIND  397 (493)
T ss_pred             CCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEECC
Confidence            67899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec--CcCCCCCCCCCCchHHHHHHHHHhhh
Q 038617          403 TLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS--FFLELEPRYPPWNDFKMKFLRLAYDF  470 (484)
Q Consensus       403 ~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~--~~~~~~~~~~p~~~~~~~~~~~~~~~  470 (484)
                      +..+...+.+||||+|.||+|++||.+|+++||+.|+|+.+.  .+.+.+++||||+.++.++++++++-
T Consensus       398 ~~~~~~~~~~PFGG~g~SG~G~~~G~~g~~~fs~~k~v~~~~~~~~~~~~~~~pp~~~~~~~~~~~~~~~  467 (493)
T PTZ00381        398 CVFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPKPVLNKSTGNSFDLSLRYPPYTSFKSWVLSFLLKL  467 (493)
T ss_pred             ccccccCCCCCCCCcCcccccccchHHHHHhccceeEEEEccccccCcccccCCCCChHHHHHHHHHHhc
Confidence            876666789999999999999999999999999999998886  34567899999999999999888643


No 4  
>KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00  E-value=4.6e-99  Score=719.99  Aligned_cols=469  Identities=49%  Similarity=0.858  Sum_probs=451.3

Q ss_pred             HHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHhhc
Q 038617            8 IEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMA   87 (484)
Q Consensus         8 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~   87 (484)
                      +++.++.+|.+|.+.++.|.+.|.++|+++.+.+++|+++|.+++..|.+|+..|+...|+...+..++++++++++|.+
T Consensus         4 ~~~~v~~~R~~F~sGrtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~wv~   83 (477)
T KOG2456|consen    4 ISETVRRLRLAFSSGRTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEWVK   83 (477)
T ss_pred             HHHHHHHHHHHHhcCCcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHhcc
Confidence            55668999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccccCccce
Q 038617           88 PKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAI  167 (484)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~alp~g~v  167 (484)
                      ++...........+.+++.+|+|||++|+|||||+.+++.++++||+|||+||+|||+.+|.++..|++++-++++++.+
T Consensus        84 ~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Yld~~~~  163 (477)
T KOG2456|consen   84 PEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQYLDQDLI  163 (477)
T ss_pred             ccccCcccccccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHhcCcceE
Confidence            88776555555678899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeccCChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHhhcccC
Q 038617          168 KVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASC  247 (484)
Q Consensus       168 ~~v~g~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~~~~~~  247 (484)
                      .+|.|+.+...+|+++++|.|+||||+.+|+.|+.+++++++|++||||||||++|++   |+|++.|++.|.|+++. |
T Consensus       164 ~VV~Ggv~ETt~LL~~rfD~IfyTGsp~VgkIim~aAaKhLTPvtLELGGKsP~~vd~---~~d~~ia~~RI~~gk~~-N  239 (477)
T KOG2456|consen  164 RVVNGGVPETTELLKQRFDHIFYTGSPRVGKIIMAAAAKHLTPVTLELGGKSPCYVDK---NCDLKIAARRIAWGKWM-N  239 (477)
T ss_pred             EEecCCCchHHHHHHhhccEEEecCCchHHHHHHHHHHhcCCcEEEEcCCCCCeeecC---CcCHHHHHHHHHHHhhc-c
Confidence            9999999888999999999999999999999999999999999999999999999999   99999999999999999 9


Q ss_pred             CCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCCCcCCCCCe
Q 038617          248 NGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLDKENLF  327 (484)
Q Consensus       248 ~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~  327 (484)
                      +||.|.|+++|+++.+++.+|+++++..+.++++.++.++.+++.+||..|++|+..++++.   ++++.||..+....|
T Consensus       240 ~GQtCvapDYiL~~k~~~~kli~alk~~l~eFYG~n~~eS~d~sRiIn~~hf~Rl~~ll~~~---~kv~~Gg~~d~~d~~  316 (477)
T KOG2456|consen  240 SGQTCVAPDYILCSKSIQPKLIDALKSTLKEFYGENPKESKDLSRIINQRHFQRLSALLDET---GKVAIGGESDESDRY  316 (477)
T ss_pred             CCCeeccCCeEEecHhhhHHHHHHHHHHHHHHhCCCccccccHHHHhhHHHHHHHHHHhcCC---CceecCCccchhhcc
Confidence            99999999999999999999999999999999999999999999999999999999999863   899999999888899


Q ss_pred             eeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEEECCCcccc
Q 038617          328 IEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQ  407 (484)
Q Consensus       328 ~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~  407 (484)
                      +.|||+.|+++++++|+||+||||++|+.|++++|+|+.+|+.+-.|++|+||+|....+++.+++.+|.|.+|+...|.
T Consensus       317 I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGgvt~ND~i~H~  396 (477)
T KOG2456|consen  317 IAPTILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGGVTVNDVIMHV  396 (477)
T ss_pred             cCCeEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCCeeecceEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999888


Q ss_pred             CCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecCcCCC--CCCCCCCchHHHHHHHHHhhhhhHHHHHHhhccc
Q 038617          408 LCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSFFLEL--EPRYPPWNDFKMKFLRLAYDFDYFNLLLLLLGLK  483 (484)
Q Consensus       408 ~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~~~~--~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  483 (484)
                      ....+||||+|.||+|++||++|++.|++.|++..++++.+.  .+|||||++.|..++|.+++.++++.++..+|+.
T Consensus       397 ~~~~lPFGGVG~SGmG~YhGK~sFdTFSH~k~~l~rs~~~d~~~~~RYPP~S~~K~~~lr~~~~~~~~~~i~~~~~~~  474 (477)
T KOG2456|consen  397 TLDSLPFGGVGESGMGRYHGKFSFDTFSHEKSCLLRSLGGDKLLALRYPPYSPQKLTLLRFLLESRLFQAILLSAGLL  474 (477)
T ss_pred             EeeccCcCCcCccccccccccccccccccchhhhhcccccchhhhhcCCCCChHHHHHHHHHHHhHHHHHHHHhheeE
Confidence            889999999999999999999999999999999999988886  8999999999999999999999999888777764


No 5  
>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]
Probab=100.00  E-value=1.9e-96  Score=761.25  Aligned_cols=432  Identities=32%  Similarity=0.452  Sum_probs=405.5

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++|+++|+.||+.|+++++.+|.++|++++++|++++++|+.++++|+|||+.+++. |+..+++.++|++..
T Consensus        32 ~a~~~dv~~Av~aA~~a~~~W~~~~~~eR~~iL~~~a~~l~~~~~ela~~~~~e~Gk~i~ea~~-ei~~~~~~~~~~a~~  110 (472)
T COG1012          32 AATAEDVDAAVAAARAAFEAWSRLSAEERAAILRRIADLLEARAEELAALITLETGKPISEARG-EIARAADFIRYYAEE  110 (472)
T ss_pred             CCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence            4688899999999999999999999999999999999999999999999999999999999986 799999999999999


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      .+++.+.. ....   .....+++++|+|||++|+|||||+++.+++++|||++||+||+|||+.+|+++..+++++.++
T Consensus       111 ~~~~~~~~-~~~~---~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~apALaaGntVV~KPse~tp~sa~~l~~~~~~a  186 (472)
T COG1012         111 ARRLEGET-IPTD---KGSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALALAELAAEA  186 (472)
T ss_pred             HHHhcCCc-cCCC---CCcceEEEeecceEEEEECCCCCHHHHHHhhHHHHHHcCCEEEEECcccCcHHHHHHHHHHHHh
Confidence            98765543 1111   1557889999999999999999999999999999999999999999999999999999999887


Q ss_pred             -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617          162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR  238 (484)
Q Consensus       162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~  238 (484)
                       +|+|++|+|+| +.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|||||||+||++   |||++.|++.
T Consensus       187 glP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa~~~k~~~lELGGk~p~IV~~---dAdl~~Av~~  263 (472)
T COG1012         187 GLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAANLKPVTLELGGKSPAIVLE---DADLDAAVDA  263 (472)
T ss_pred             CCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHhhcCCcEEEECCCCCCeEECC---CCCHHHHHHH
Confidence             99999999999 666899999998 99999999999999999999999999999999999999999   9999999999


Q ss_pred             HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHh-hcCCC-CCCCCccccccCHHHHHHHHHHhhchhc-CCce
Q 038617          239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKK-FYGEN-PKDSKSISRIINEYHFERLRKLLKDPLV-ADAI  315 (484)
Q Consensus       239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~-~~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~  315 (484)
                      +++++|+ |+||.|++++|+|||+++||+|+++|.++ ++ +++|| .|+++++||++++.+++++.++|+++.+ |+.+
T Consensus       264 ~~~g~f~-n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd~~d~~t~~Gpli~~~~~~~v~~~i~~a~~~G~~~  341 (472)
T COG1012         264 AVFGAFF-NAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARL  341 (472)
T ss_pred             HHHHHHh-CCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCEE
Confidence            9999999 99999999999999999999999999999 66 78999 5999999999999999999999999975 5677


Q ss_pred             eeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccce
Q 038617          316 VHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS  395 (484)
Q Consensus       316 ~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~  395 (484)
                      +.||..+. |+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|..++.++++++++
T Consensus       342 ~~Gg~~~~-g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~lAN~t~yGL~a~v~t~d~~~~~~~~~~l~a  420 (472)
T COG1012         342 LAGGKRPG-GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARAFRVARRLEA  420 (472)
T ss_pred             EeCCcCCC-CeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCe
Confidence            88887444 89999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617          396 GSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS  444 (484)
Q Consensus       396 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~  444 (484)
                      |+|+||+...+...+.+||||+|.||+|+++|.+++++|++.|++..+.
T Consensus       421 G~v~iN~~~~~~~~~~~PFGG~k~SG~G~~~g~~~~~~~~~~k~v~~~~  469 (472)
T COG1012         421 GMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTVTIKL  469 (472)
T ss_pred             eEEEECCCCCCCCCCCCCCCCcccccCCccchHHHHHHHhcceEEEEec
Confidence            9999998864456788999999999999999999999999999998764


No 6  
>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional
Probab=100.00  E-value=1e-95  Score=761.73  Aligned_cols=431  Identities=25%  Similarity=0.372  Sum_probs=402.0

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++|+++|++||+.|+++|.++|.++|++++++|++++++|++++++|+|||..+++ .|+..+++.+++++..
T Consensus        44 ~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~  122 (482)
T PRK11241         44 KMGADETRAAIDAANRALPAWRALTAKERANILRRWFNLMMEHQDDLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEE  122 (482)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999999999999999999999999999997 4999999999999887


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      .++..+...   +....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.+++.++
T Consensus       123 ~~~~~g~~~---~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~a  199 (482)
T PRK11241        123 GKRIYGDTI---PGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRA  199 (482)
T ss_pred             HHHhcCccc---ccCCCCceEEEEEeeceEEEEECCCcChHHHHHHHHHHHHHhCCEEEEECCCCChHHHHHHHHHHHHc
Confidence            765433211   11111234578999999999999999999999999999999999999999999999999999999999


Q ss_pred             -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617          162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR  238 (484)
Q Consensus       162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~  238 (484)
                       +|+|++|+++| +.+.++.|++|+ ||.|+||||+++|+.|++.++++++|+++|+|||||+||++   |||+|.|++.
T Consensus       200 glP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~aa~~l~~~~lElGGknp~IV~~---dADld~aa~~  276 (482)
T PRK11241        200 GIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFD---DADLDKAVEG  276 (482)
T ss_pred             CCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCeEEEcC---CCCHHHHHHH
Confidence             99999999999 567889999998 99999999999999999999999999999999999999999   9999999999


Q ss_pred             HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617          239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV  316 (484)
Q Consensus       239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~  316 (484)
                      +++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++|+++.+ |++++
T Consensus       277 i~~~~f~-~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl  355 (482)
T PRK11241        277 ALASKFR-NAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVV  355 (482)
T ss_pred             HHHHHHh-cCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEE
Confidence            9999999 99999999999999999999999999999999999999 889999999999999999999999874 77999


Q ss_pred             eCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccce
Q 038617          317 HGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS  395 (484)
Q Consensus       317 ~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~  395 (484)
                      +||..+ .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++
T Consensus       356 ~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~aN~s~~GL~a~Vft~d~~~a~~~~~~l~~  435 (482)
T PRK11241        356 CGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEY  435 (482)
T ss_pred             ecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHHHHHhhCCCCCceEEEEcCCHHHHHHHHHHcCc
Confidence            999754 3689999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEE
Q 038617          396 GSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQ  442 (484)
Q Consensus       396 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~  442 (484)
                      |+|+||+...  ..+.+||||+|.||+|+++|.+|+++||+.|++++
T Consensus       436 G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~g~~~ft~~k~v~~  480 (482)
T PRK11241        436 GIVGINTGII--SNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI  480 (482)
T ss_pred             cEEEECCCCC--CCCCCCcCCccccccCcccHHHHHHHhhcceEEEE
Confidence            9999998764  34578999999999999999999999999999865


No 7  
>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]
Probab=100.00  E-value=1.9e-95  Score=765.89  Aligned_cols=433  Identities=21%  Similarity=0.278  Sum_probs=404.5

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||+.++.. |+..+++.+++++..
T Consensus       147 ~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~k~a~~L~~~~~ela~~~~~E~GKp~~ea~~-EV~~~i~~~~~~a~~  225 (604)
T PLN02419        147 LTTNEEFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELIRKNMDKLAMNITTEQGKTLKDSHG-DIFRGLEVVEHACGM  225 (604)
T ss_pred             CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999999999999999999999999999974 999999999999998


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      .+.+.+...   +....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..|++++.++
T Consensus       226 a~~~~g~~~---~~~~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~~iapALaAGNtVVlKPSe~tp~ta~~l~~l~~eA  302 (604)
T PLN02419        226 ATLQMGEYL---PNVSNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEA  302 (604)
T ss_pred             HHHhhCCcc---cccCCCccceEEecCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHh
Confidence            877654321   11112345678999999999999999999999999999999999999999999999999999999999


Q ss_pred             -cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617          162 -LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI  239 (484)
Q Consensus       162 -lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i  239 (484)
                       +|+|+||+++|+.+.++.|+.|+ ||+|+||||+.+|+.|++.++++++|+++|+|||||+||++   |||++.|++.+
T Consensus       303 GlP~GvvnvV~G~~~~~~~L~~~~~Vd~V~FTGSt~vG~~I~~~Aa~~lk~v~LELGGknp~IV~~---DADld~Aa~~i  379 (604)
T PLN02419        303 GLPDGVLNIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAAKGKRIQSNMGAKNHGLVLP---DANIDATLNAL  379 (604)
T ss_pred             CcCcceEEEEeCChHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHhccCCcEEEecCCCCeEEEcC---CCCHHHHHHHH
Confidence             99999999999777889999987 99999999999999999999999999999999999999999   99999999999


Q ss_pred             HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCceee
Q 038617          240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIVH  317 (484)
Q Consensus       240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~  317 (484)
                      ++++|. |+||.|++++|||||++ +|+|+++|.++++++++|+| ++++++||++++.+++++.++|+++.+ |+++++
T Consensus       380 v~g~f~-naGQ~C~A~~Rv~V~~~-~d~f~e~l~~~~~~l~vG~p~d~~t~~GPlis~~~~~~v~~~i~~A~~~GAkvl~  457 (604)
T PLN02419        380 LAAGFG-AAGQRCMALSTVVFVGD-AKSWEDKLVERAKALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDDGAKLLL  457 (604)
T ss_pred             HHHHHh-hCCCCcCCCCEEEEeCc-HHHHHHHHHHHHHHhccCCCCCCCCCccCCCCHHHHHHHHHHHHHHHhcCCEEEe
Confidence            999999 99999999999999999 89999999999999999999 889999999999999999999999874 779999


Q ss_pred             CCCcC-----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617          318 GGLLD-----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG  392 (484)
Q Consensus       318 gg~~~-----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~  392 (484)
                      ||...     .+|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+.+++++
T Consensus       458 GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~~~~dEAI~laN~s~yGLaasVfT~d~~~a~~~a~~  537 (604)
T PLN02419        458 DGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMD  537 (604)
T ss_pred             CCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHh
Confidence            98642     3589999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cceeeEEECCCccccCCCCCCcccCCCCCCC--CcchHHHHHHhhhccEEEEec
Q 038617          393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIG--RYHGHYSFETFSHEKAIMQRS  444 (484)
Q Consensus       393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G--~~~g~~~~~~f~~~k~v~~~~  444 (484)
                      +++|.|+||+.. +...+.+||||+|.||+|  +++|.+|+++|++.|+|++..
T Consensus       538 l~aG~V~IN~~~-~~~~~~~PFGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~~  590 (604)
T PLN02419        538 IEAGQIGINVPI-PVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKLVTQKQ  590 (604)
T ss_pred             CCeeeEEEcCCC-CCCCCCCCcCCcCcCCCCCCcccHHHHHHHhhCeEEEEEcc
Confidence            999999999874 234578999999999999  799999999999999998765


No 8  
>KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00  E-value=6.8e-96  Score=692.11  Aligned_cols=433  Identities=26%  Similarity=0.379  Sum_probs=409.8

Q ss_pred             CCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHH
Q 038617            3 AAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCL   82 (484)
Q Consensus         3 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~   82 (484)
                      .+.+|.++||++|.+||.+|+.++..+|.++|+++.++|.+|.++|+++++.|.|||+.|++. ||..+...++|+++..
T Consensus        58 ~~V~e~~kAI~aA~EaF~s~~~~takeRs~lLrkwy~Li~en~ddLa~iiTlE~GKpL~eA~g-Ev~y~a~f~eWyAeEA  136 (503)
T KOG2451|consen   58 MTVEEAEKAIDAAYEAFKSYRNLTAKERSALLRKWYELIMENKDDLATIITLENGKPLGEAKG-EVAYSAAFFEWYAEEA  136 (503)
T ss_pred             CcHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHHhhhcCCchhhccc-eeehhHHHHHHHHHHh
Confidence            567899999999999999999999999999999999999999999999999999999999984 9999999999999999


Q ss_pred             HHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc-
Q 038617           83 DKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY-  161 (484)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a-  161 (484)
                      ++.+++..   +.........+.++|+||+++|+|||||.+...++..+||++||+||+||++++|++++.++++..++ 
T Consensus       137 ~RvyGdii---~s~~~~rr~i~ikQPvGV~alItPWNFP~AMItRK~gAALAaGCTvVvkPs~~TPlsaLala~lA~~AG  213 (503)
T KOG2451|consen  137 RRVYGDII---PSLNPNRRLIVIKQPVGVVALITPWNFPAAMITRKAGAALAAGCTVVVKPSEDTPLSALALAKLAEEAG  213 (503)
T ss_pred             hhhhcccc---CCCCCCceEEEEeccceeEEEecCcCChHHHHHhHHHHHHhcCceEEEccCCCCchHHHHHHHHHHHcC
Confidence            98877653   22234457788999999999999999999999999999999999999999999999999999999999 


Q ss_pred             cCccceeeccCC----hhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHH
Q 038617          162 LDCKAIKVTNGG----VDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTV  236 (484)
Q Consensus       162 lp~g~v~~v~g~----~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa  236 (484)
                      +|+|++|+|+++    .+.++.|+.+| |..|+||||+.+|+.++++++.+.|++.+|||||.|+||++   |||+|+|+
T Consensus       214 iP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL~~qsastvKkvslELGGNAPfIVFd---dadld~Av  290 (503)
T KOG2451|consen  214 IPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKILMAQSASTVKKVSLELGGNAPFIVFD---DADLDQAV  290 (503)
T ss_pred             CCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHHHHhhhhhhhheehhhcCCCceEEec---CcCHHHHH
Confidence            999999999962    47899999998 99999999999999999999999999999999999999999   99999999


Q ss_pred             HHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCc
Q 038617          237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADA  314 (484)
Q Consensus       237 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~  314 (484)
                      +..+..+|. ++||.|.+.+|+|||++|||+|++.|.+++.++++||. ++++..||+||+.+.++++.++++|.. |++
T Consensus       291 ~g~mA~KFr-~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~vGdG~~~~tt~GpLIne~av~Kve~~v~DAvsKga~  369 (503)
T KOG2451|consen  291 EGAMACKFR-NSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKVGDGLDPGTTQGPLINEKAVEKVEKHVEDAVSKGAK  369 (503)
T ss_pred             HHHHHhhhc-cCCceeEecceeEEehhhHHHHHHHHHHHHHheeccCCCCCCCccCCccCHHHHHHHHHHHHHHHhcCCe
Confidence            999999999 99999999999999999999999999999999999998 999999999999999999999999985 689


Q ss_pred             eeeCCC-cCC-CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617          315 IVHGGL-LDK-ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG  392 (484)
Q Consensus       315 ~~~gg~-~~~-~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~  392 (484)
                      +++||+ +.+ ..+|++|||+.+++++|-+..||+|||+.+|++|+|.||+|+++|+++.||++|+||+|..+..+++++
T Consensus       370 ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdteeEvi~~ANdt~vGLAgYvfs~~~s~~~rVae~  449 (503)
T KOG2451|consen  370 IILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDTEEEVIEWANDTRVGLAGYVFSNNLSRLFRVAEA  449 (503)
T ss_pred             EEeCCeEccccCCccccceEeecCCccceeeccccccccceeeeeCCHHHHHHHhccCccceeeEEeccCHHHHHHHHHH
Confidence            999998 444 458999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecC
Q 038617          393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSF  445 (484)
Q Consensus       393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~  445 (484)
                      |++|+|-+|....  .....||||+|+||+||+++.+|+++|+..|++++...
T Consensus       450 LEvGmVGvNegli--s~~~~pFGGVKeSG~GREgskyGidey~~ik~icig~L  500 (503)
T KOG2451|consen  450 LEVGMVGVNEGLI--SDAEAPFGGVKESGFGREGSKYGIDEYLVIKYICIGTL  500 (503)
T ss_pred             Hhcceeeccccee--cccccCcCCccccccCccccccchhhhhhhheeeecCc
Confidence            9999999998765  57889999999999999999999999999999988753


No 9  
>KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00  E-value=4.3e-96  Score=725.21  Aligned_cols=433  Identities=28%  Similarity=0.404  Sum_probs=407.6

Q ss_pred             CCCHHHHHHHHHHHHHHhH--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFR--SGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL   79 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~   79 (484)
                      .++.+||++|+++||+||+  .|++++..+|.++|++++++++++++.|+...+.+.|||..+++..++..+++.++|++
T Consensus        54 ~~~~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~a  133 (501)
T KOG2450|consen   54 EATEEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDADVLAALEVLDNGKPYPEALVSDLPPAIDCFRYYA  133 (501)
T ss_pred             cccHHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhHHHhhhcccccCCcchhhhhcCchhhhhHHHhhc
Confidence            4789999999999999999  79999999999999999999999999999999999999999999679999999999999


Q ss_pred             HHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617           80 SCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP  159 (484)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~  159 (484)
                      ...++....    ..........+++++|+||++.|.|||||+....|+++|||++||+||+||++++|+|+..+++++.
T Consensus       134 g~ad~~~~~----~~~~~~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKlaPALa~GNtvV~Kpae~tplsal~~~~l~~  209 (501)
T KOG2450|consen  134 GWADKIHGS----TIPTDGEFFAYTRREPIGVCGQIIPWNFPLLMQAWKLAPALAAGNTVVLKPAEQTPLTALYLASLCK  209 (501)
T ss_pred             cchhhcccc----cCCCCCceEEEecCCcceeeeEeccCchHHHHHHHhhhhHHhhCcEEEecCCCCCCchHHHHHHHhH
Confidence            888665221    1122233467899999999999999999999999999999999999999999999999999999999


Q ss_pred             cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHh-cccCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617          160 LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAA-KHLTPVTLELGGKCPAILDTLSSPLDIKVT  235 (484)
Q Consensus       160 ~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~-~~~~~~~lelgG~~p~iV~~~~~daDl~~a  235 (484)
                      ++ +|+|++|+|+| +.+.+.+|.+|+ ||.|.||||+.+|+.|+++++ .++||++||+|||+|.||++   |||++.|
T Consensus       210 eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~aaa~~n~K~vtLElGGKsp~Ivf~---Dadld~a  286 (501)
T KOG2450|consen  210 EAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIMEAAAESNLKPVTLELGGKSPIIVFD---DADLDLA  286 (501)
T ss_pred             HhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhhhhhhcCCceeccccCCCCcceEec---ccchHHH
Confidence            99 99999999999 789999999997 999999999999999999888 45899999999999999999   9999999


Q ss_pred             HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHh-hcCCCC-CCCCccccccCHHHHHHHHHHhhchh-cC
Q 038617          236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKK-FYGENP-KDSKSISRIINEYHFERLRKLLKDPL-VA  312 (484)
Q Consensus       236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~-~~  312 (484)
                      ++.+..+.|+ |+||.|++.+|+|||++|||+|++.++++..+ +++||| ++.+.+||.+++.|++|+.+||+.+. +|
T Consensus       287 v~~~~~~iF~-nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kvGdP~~~~~~qG~~i~~~q~ekI~~yi~~~k~eG  365 (501)
T KOG2450|consen  287 VENAAFGIFF-NQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKVGDPFDEGTEQGPQISKTQYEKILGYIESGKKEG  365 (501)
T ss_pred             HHHHHHHhhc-ccccccccCceeEEechHHHHHHHHHHHHHhcccccCCCCCcccccccccCHHHHHHHHHHHHHHHhcC
Confidence            9999999999 99999999999999999999999999999976 899999 89999999999999999999999987 47


Q ss_pred             CceeeCCCc-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh
Q 038617          313 DAIVHGGLL-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS  391 (484)
Q Consensus       313 ~~~~~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~  391 (484)
                      +++++||.+ ...|+|+.|||+.++.++|.|++||+||||++|++|++.||+|+++|++.|||+++|||+|.+++.++++
T Consensus       366 a~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~eE~i~~AN~t~yGLAa~V~t~dl~~a~~va~  445 (501)
T KOG2450|consen  366 ATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTEEEVIERANNTTYGLAAGVFTKDLDKAHRVAN  445 (501)
T ss_pred             CEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEEEEecCcHHHHHHHhcCCcccceeeEeccChHHHHHHHH
Confidence            899999966 3579999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617          392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS  444 (484)
Q Consensus       392 ~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~  444 (484)
                      ++++|+||||+...  .....||||+|+||+||+.|.+++.+|++.|+|+++-
T Consensus       446 ~l~aGtVwiN~y~~--~~~~~PfgG~K~SG~GRE~g~~~l~~ytevKtv~v~~  496 (501)
T KOG2450|consen  446 ALQAGTVWINCYNV--FDAQVPFGGFKMSGIGRELGEYGLEAYTEVKTVTVKL  496 (501)
T ss_pred             HhcCceEEEecccc--ccccCCccccccccCCccccHHHHhhcceeeEEEEeC
Confidence            99999999999865  5789999999999999999999999999999998763


No 10 
>TIGR03374 ABALDH 1-pyrroline dehydrogenase. Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.
Probab=100.00  E-value=4.4e-94  Score=749.04  Aligned_cols=432  Identities=24%  Similarity=0.360  Sum_probs=401.7

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++++++|++||++|+++|.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.+++++..
T Consensus        34 ~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~  113 (472)
T TIGR03374        34 EASAEQVDAAVRAADAAFAEWGQTTPKARAECLLKLADVIEENAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGA  113 (472)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999999999999999999999988756999999999999877


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      .+.+... ..  .....+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus       114 ~~~~~~~-~~--~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~  190 (472)
T TIGR03374       114 ARCLSGL-AA--GEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI  190 (472)
T ss_pred             HHHhcCc-cc--CccCCCceEEEEEecceEEEEECCCCchHHHHHHHHHHHHhcCCEEEecCCCCCCHHHHHHHHHHHHh
Confidence            6554321 11  11112345678999999999999999999999999999999999999999999999999999999888


Q ss_pred             cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617          162 LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI  239 (484)
Q Consensus       162 lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i  239 (484)
                      +|+|++|+++| +.+.++.|++|+ +|+|.||||+.+|+.|++.+++++||+++|+|||||+||++   |||++.|++.+
T Consensus       191 lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~lElGGk~p~iV~~---dadl~~aa~~i  267 (472)
T TIGR03374       191 FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPSIKRTHMELGGKAPVIVFD---DADIDAVVEGV  267 (472)
T ss_pred             CCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcccceEEecCCCCeeEECC---CCCHHHHHHHH
Confidence            99999999999 667899999997 99999999999999999999999999999999999999999   99999999999


Q ss_pred             HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-C-Ccee
Q 038617          240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-A-DAIV  316 (484)
Q Consensus       240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~-~~~~  316 (484)
                      ++++|. |+||.|++++|||||++++|+|+++|+++++++++|+| ++++++||++++.+++++.++|+++.+ | ++++
T Consensus       268 ~~~~~~-~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~  346 (472)
T TIGR03374       268 RTFGFY-NAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVI  346 (472)
T ss_pred             HHHHHh-hcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHcCCeEEE
Confidence            999999 99999999999999999999999999999999999999 889999999999999999999999875 4 5899


Q ss_pred             eCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccce
Q 038617          317 HGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS  395 (484)
Q Consensus       317 ~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~  395 (484)
                      +||... ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++
T Consensus       347 ~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~vft~d~~~~~~~~~~l~~  426 (472)
T TIGR03374       347 TGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTKDVGRAHRLSARLQY  426 (472)
T ss_pred             eCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCc
Confidence            998754 3589999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEE
Q 038617          396 GSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQ  442 (484)
Q Consensus       396 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~  442 (484)
                      |+|+||+...  ..+.+||||+|.||+|+++|.+|+++||+.|+++.
T Consensus       427 G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~~  471 (472)
T TIGR03374       427 GCTWVNTHFM--LVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHIMV  471 (472)
T ss_pred             ceEEECCCCC--CCCCCCCCCCccCccCccchHHHHHHhhceEEEEE
Confidence            9999998764  46789999999999999999999999999999864


No 11 
>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like. Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616)  most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.
Probab=100.00  E-value=1.4e-93  Score=738.00  Aligned_cols=445  Identities=50%  Similarity=0.853  Sum_probs=411.4

Q ss_pred             HHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHhhcCc
Q 038617           10 DKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPK   89 (484)
Q Consensus        10 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~   89 (484)
                      +.+++|++||+.|+++++.+|.++|++++++|++++++|+++++.|+|||+.++...|+..+++.+++++..++.+.+++
T Consensus         2 ~~v~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~   81 (449)
T cd07136           2 SLVEKQRAFFKTGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMKPK   81 (449)
T ss_pred             hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            57899999999999999999999999999999999999999999999999999976699999999999999888876543


Q ss_pred             cccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccccCccceee
Q 038617           90 KRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKV  169 (484)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~alp~g~v~~  169 (484)
                      .........+...+++++|+|||++|+|||||++++++++++||++||+||+|||+.+|.++..+++++.+++|+|++|+
T Consensus        82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~alP~gv~~~  161 (449)
T cd07136          82 RVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEETFDEEYVAV  161 (449)
T ss_pred             ccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHhCCCCEEEE
Confidence            22111111234567899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHhhcccCCC
Q 038617          170 TNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNG  249 (484)
Q Consensus       170 v~g~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~~~~~~~G  249 (484)
                      ++|+.+.+..|+.|+||.|.||||+++|+.|++.++++++|+++|+|||||+||++   |||+|.|++.+++++|. |+|
T Consensus       162 v~g~~~~~~~L~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElgGknp~iV~~---dADld~aa~~i~~~~~~-~~G  237 (449)
T cd07136         162 VEGGVEENQELLDQKFDYIFFTGSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDE---DANLKLAAKRIVWGKFL-NAG  237 (449)
T ss_pred             EeCChHHHHHHhcCCCCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEECC---CCCHHHHHHHHHHHHHc-ccC
Confidence            99977888999977899999999999999999999999999999999999999999   99999999999999999 999


Q ss_pred             CccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCCCcCCCCCeee
Q 038617          250 QVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLDKENLFIE  329 (484)
Q Consensus       250 q~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~  329 (484)
                      |.|++++|+|||++++|+|+++|+++++++++|+|..++++||++++.+.+++.++++++    ++++||..+.+|+|+.
T Consensus       238 Q~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~i~~a----~~~~gG~~~~~g~~~~  313 (449)
T cd07136         238 QTCVAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLESPDYGRIINEKHFDRLAGLLDNG----KIVFGGNTDRETLYIE  313 (449)
T ss_pred             CcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCCCCCccCcCCHHHHHHHHHHHhcc----eEEECCCcCCCCCEEe
Confidence            999999999999999999999999999999999984488999999999999999999864    7889987655689999


Q ss_pred             eEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEEECCCccccCC
Q 038617          330 PTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLC  409 (484)
Q Consensus       330 Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~  409 (484)
                      |||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+.++++++++|+|+||+...+...
T Consensus       314 Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~  393 (449)
T cd07136         314 PTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCINDTIMHLAN  393 (449)
T ss_pred             eEEEecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccccccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999987654445


Q ss_pred             CCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecCcCCCCCCCCCCchHHHH
Q 038617          410 DVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSFFLELEPRYPPWNDFKMK  462 (484)
Q Consensus       410 ~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~~~~~~~~~p~~~~~~~  462 (484)
                      +.+||||+|.||+|+++|.+++++||+.|+|++...+.+..++|||++.++.+
T Consensus       394 ~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~~~~~~~~~~~~~~~~~~~  446 (449)
T cd07136         394 PYLPFGGVGNSGMGSYHGKYSFDTFSHKKSILKKSTWFDLPLRYPPYKGKKKK  446 (449)
T ss_pred             CCCCccCcCcccCCcccCHHHHHHhccceEEEEcCCcCCccccCCCCchHHHh
Confidence            78999999999999999999999999999998876677789999999866554


No 12 
>PLN02766 coniferyl-aldehyde dehydrogenase
Probab=100.00  E-value=3.3e-93  Score=746.95  Aligned_cols=433  Identities=24%  Similarity=0.372  Sum_probs=403.4

Q ss_pred             CCCHHHHHHHHHHHHHHhH--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFR--SGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL   79 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~   79 (484)
                      .++.+|+++|+++|++||+  .|+.++.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.+++++
T Consensus        54 ~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a  133 (501)
T PLN02766         54 EGDKEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIEEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYA  133 (501)
T ss_pred             CCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence            4789999999999999997  59999999999999999999999999999999999999999987569999999999999


Q ss_pred             HHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617           80 SCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP  159 (484)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~  159 (484)
                      ...+++.+.. ..   .......+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.
T Consensus       134 ~~~~~~~g~~-~~---~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~  209 (501)
T PLN02766        134 GAADKIHGET-LK---MSRQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAK  209 (501)
T ss_pred             HHHHHhcCce-ec---cCCCceEEEEeccceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHH
Confidence            8887764321 11   1122346788999999999999999999999999999999999999999999999999999999


Q ss_pred             cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHh-cccCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617          160 LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAA-KHLTPVTLELGGKCPAILDTLSSPLDIKVT  235 (484)
Q Consensus       160 ~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~-~~~~~~~lelgG~~p~iV~~~~~daDl~~a  235 (484)
                      ++ +|+|++|+|+| +.+.++.|++|+ +|.|.||||+.+|+.|++.++ ++++|+++|+|||||+||++   |||++.|
T Consensus       210 ~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~l~~~~lElGGknp~iV~~---dADl~~A  286 (501)
T PLN02766        210 LAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAAATSNLKQVSLELGGKSPLLIFD---DADVDMA  286 (501)
T ss_pred             hcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhhcCCCeEEEECCCCCeEEECC---CCCHHHH
Confidence            98 99999999999 567889999997 999999999999999999998 58999999999999999999   9999999


Q ss_pred             HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CC
Q 038617          236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-AD  313 (484)
Q Consensus       236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~  313 (484)
                      ++.+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++|+++.+ |+
T Consensus       287 a~~i~~g~f~-n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga  365 (501)
T PLN02766        287 VDLALLGIFY-NKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGA  365 (501)
T ss_pred             HHHHHHHHHh-hcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCC
Confidence            9999999999 99999999999999999999999999999999999999 888999999999999999999999864 67


Q ss_pred             ceeeCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617          314 AIVHGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG  392 (484)
Q Consensus       314 ~~~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~  392 (484)
                      ++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.+++++
T Consensus       366 ~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~deai~~aN~~~~GL~a~Vft~d~~~a~~~~~~  445 (501)
T PLN02766        366 TLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDVANTVSRS  445 (501)
T ss_pred             EEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHh
Confidence            899999753 4689999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617          393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS  444 (484)
Q Consensus       393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~  444 (484)
                      +++|+|+||+...  ..+.+||||+|.||+|+++|.+++++||+.|++++..
T Consensus       446 l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~~  495 (501)
T PLN02766        446 IRAGTIWVNCYFA--FDPDCPFGGYKMSGFGRDQGMDALDKYLQVKSVVTPL  495 (501)
T ss_pred             CCcceEEECCCCC--CCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEec
Confidence            9999999997653  5678999999999999999999999999999998764


No 13 
>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional
Probab=100.00  E-value=6.5e-93  Score=739.03  Aligned_cols=431  Identities=21%  Similarity=0.362  Sum_probs=402.7

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++++++|++||+.|++++.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++.+++++..
T Consensus        25 ~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~  103 (462)
T PRK13968         25 WAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPINQAR-AEVAKSANLCDWYAEH  103 (462)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999999999999999999999999999997 4999999999999998


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      .+++.+....    ...+...+++++|+|||++|+|||||++++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus       104 ~~~~~~~~~~----~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs~~tp~~~~~l~~~~~~a  179 (462)
T PRK13968        104 GPAMLKAEPT----LVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFKDA  179 (462)
T ss_pred             HHHhhCCccc----cCCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHc
Confidence            8777554321    112345688999999999999999999999999999999999999999999999999999999999


Q ss_pred             -cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617          162 -LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI  239 (484)
Q Consensus       162 -lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i  239 (484)
                       +|+|++|+++|+.+.+..|+.|+ +|.|+||||+.+|+.|++.+++++||+++|+|||||+||++   |||++.|++.+
T Consensus       180 GlP~gv~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~G~~i~~~aa~~l~~~~lElGGk~p~iV~~---dAdl~~aa~~i  256 (462)
T PRK13968        180 GIPQGVYGWLNADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLN---DADLELAVKAA  256 (462)
T ss_pred             CcCcCcEEEEecCchhhHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEecCCCCceEECC---CCCHHHHHHHH
Confidence             99999999998555556688887 99999999999999999999999999999999999999999   99999999999


Q ss_pred             HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCceee
Q 038617          240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIVH  317 (484)
Q Consensus       240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~  317 (484)
                      ++++|. |+||.|++++|+|||++++|+|+++|+++++++++|+| ++++++||++++.+++++.++++++.. |+++++
T Consensus       257 ~~~~~~-~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~  335 (462)
T PRK13968        257 VAGRYQ-NTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQVEATLAEGARLLL  335 (462)
T ss_pred             HHHHHh-ccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEe
Confidence            999999 99999999999999999999999999999999999999 888999999999999999999999864 778999


Q ss_pred             CCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcccee
Q 038617          318 GGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSG  396 (484)
Q Consensus       318 gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g  396 (484)
                      ||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+.++++++++|
T Consensus       336 gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~~~n~~~~gLs~~v~t~d~~~a~~~~~~l~~G  415 (462)
T PRK13968        336 GGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECG  415 (462)
T ss_pred             CCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhCCcc
Confidence            98753 35899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617          397 SLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR  443 (484)
Q Consensus       397 ~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~  443 (484)
                      +|+||+...  ..+.+||||+|.||+|+++|++|+++|++.|+|++.
T Consensus       416 ~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~  460 (462)
T PRK13968        416 GVFINGYCA--SDARVAFGGVKKSGFGRELSHFGLHEFCNIQTVWKD  460 (462)
T ss_pred             eEEECCCCC--CCCCCCCCCccccccCcCchHHHHHHhcceeEEEEe
Confidence            999998754  467899999999999999999999999999999764


No 14 
>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed
Probab=100.00  E-value=6.8e-93  Score=737.94  Aligned_cols=433  Identities=24%  Similarity=0.357  Sum_probs=403.7

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.++++++.
T Consensus        19 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~   97 (457)
T PRK09406         19 ALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLASAKA-EALKCAKGFRYYAEH   97 (457)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence            4788999999999999999999999999999999999999999999999999999999999974 999999999999999


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      ++++......... .......+++++|+|||++|+|||||++++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus        98 ~~~~~~~~~~~~~-~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~l~~~a  176 (457)
T PRK09406         98 AEALLADEPADAA-AVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNVPQTALYLADLFRRA  176 (457)
T ss_pred             HHHHhCCcccccc-CCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHh
Confidence            8887654321111 112235678999999999999999999999999999999999999999999999999999999999


Q ss_pred             -cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617          162 -LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI  239 (484)
Q Consensus       162 -lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i  239 (484)
                       +|+|++|+++++.+.+..|+.|+ +|.|+||||+.+|+.|++.+++++||+++|+|||||+||++   |||++.|++.+
T Consensus       177 GlP~gvv~~v~~g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~~~~~~~lElGG~~~~iV~~---dadl~~aa~~i  253 (457)
T PRK09406        177 GFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGGSDPFIVMP---SADLDRAAETA  253 (457)
T ss_pred             CCCcCcEEEEcCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCceeeecCCCCeeEECC---CCCHHHHHHHH
Confidence             99999999987656788899887 99999999999999999999999999999999999999999   99999999999


Q ss_pred             HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCceee
Q 038617          240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIVH  317 (484)
Q Consensus       240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~  317 (484)
                      ++++|. |+||.|++++|||||++++|+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ |+++++
T Consensus       254 ~~~~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~  332 (457)
T PRK09406        254 VTARVQ-NNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILC  332 (457)
T ss_pred             HHHHhh-CCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEe
Confidence            999999 99999999999999999999999999999999999999 888999999999999999999999864 778999


Q ss_pred             CCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcccee
Q 038617          318 GGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSG  396 (484)
Q Consensus       318 gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g  396 (484)
                      ||..+ .+|+|++|||+.+++++|.+++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|
T Consensus       333 gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G  412 (457)
T PRK09406        333 GGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQERFIDDLEAG  412 (457)
T ss_pred             CCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcc
Confidence            99763 36899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEE
Q 038617          397 SLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQ  442 (484)
Q Consensus       397 ~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~  442 (484)
                      +|+||+.+.  ..+.+||||+|.||+|+++|.+++++||+.|++.+
T Consensus       413 ~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~  456 (457)
T PRK09406        413 QVFINGMTV--SYPELPFGGVKRSGYGRELSAHGIREFCNIKTVWI  456 (457)
T ss_pred             eEEECCCCC--CCCCCCCCCccccccCccchHHHHHHhhceEEEEe
Confidence            999998765  46789999999999999999999999999999864


No 15 
>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like. Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.
Probab=100.00  E-value=1.5e-92  Score=738.69  Aligned_cols=431  Identities=27%  Similarity=0.379  Sum_probs=402.0

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++++++|++||++|+++|.++|.++|++++++|++++++|++++++|+|||..+++..|+..+++.+++++..
T Consensus        34 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~  113 (475)
T cd07117          34 DATDADVDRAVKAAQEAFKTWRKTTVAERANILNKIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGV  113 (475)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999999999999999999999999999766999999999999877


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      .+......    .....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus       114 ~~~~~~~~----~~~~~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~AL~aGN~VvlKPs~~~p~~~~~l~~~~~~~  189 (475)
T cd07117         114 IRAEEGSA----NMIDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLLELAKIIQDV  189 (475)
T ss_pred             HHHhcCcc----cccCCCceeEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHh
Confidence            65442211    11112335678999999999999999999999999999999999999999999999999999999988


Q ss_pred             cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617          162 LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI  239 (484)
Q Consensus       162 lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i  239 (484)
                      +|+|++|+++| +.+.++.|++|+ +|.|+||||+.+|+.|.+.++++++|+++|+|||||+||++   |||++.|++.+
T Consensus       190 lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~---dADl~~aa~~i  266 (475)
T cd07117         190 LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAKKLIPATLELGGKSANIIFD---DANWDKALEGA  266 (475)
T ss_pred             CCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCcEEEeCCCCCeEEECC---CCChHHHHHHH
Confidence            99999999998 567889999997 99999999999999999999999999999999999999999   99999999999


Q ss_pred             HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCceee
Q 038617          240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIVH  317 (484)
Q Consensus       240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~  317 (484)
                      ++++|. |+||.|++++|||||++++|+|+++|.++++++++|+| ++++++||++++.+++++.++++++.. |+++++
T Consensus       267 ~~~~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~  345 (475)
T cd07117         267 QLGILF-NQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILT  345 (475)
T ss_pred             HHHHhh-ccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCcCCHHHHHHHHHHHHHHHHCCCEEEe
Confidence            999999 99999999999999999999999999999999999999 889999999999999999999999864 778999


Q ss_pred             CCCcC-----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617          318 GGLLD-----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG  392 (484)
Q Consensus       318 gg~~~-----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~  392 (484)
                      ||...     ++|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.+++++
T Consensus       346 gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~  425 (475)
T cd07117         346 GGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTKDINRALRVARA  425 (475)
T ss_pred             CCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHh
Confidence            98653     2589999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEE
Q 038617          393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQ  442 (484)
Q Consensus       393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~  442 (484)
                      +++|+|+||++..  ..+.+||||+|.||+|+++|.+|+++||+.|++++
T Consensus       426 l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~  473 (475)
T cd07117         426 VETGRVWVNTYNQ--IPAGAPFGGYKKSGIGRETHKSMLDAYTQMKNIYI  473 (475)
T ss_pred             CCcceEEECCCCC--CCCCCCCCCCccCcCCCCchHHHHHHHhCeEEEEE
Confidence            9999999998654  46789999999999999999999999999999875


No 16 
>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.
Probab=100.00  E-value=1.6e-92  Score=739.08  Aligned_cols=435  Identities=24%  Similarity=0.349  Sum_probs=401.1

Q ss_pred             CCCHHHHHHHHHHHHHHhH--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFR--SGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL   79 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~   79 (484)
                      .++.+|+++|+++|++||+  .|+.+|.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.+++++
T Consensus        39 ~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a  118 (486)
T cd07140          39 LATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQEELATIESLDSGAVYTLALKTHVGMSIQTFRYFA  118 (486)
T ss_pred             CCCHHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHH
Confidence            5788999999999999998  59999999999999999999999999999999999999999987569999999999999


Q ss_pred             HHHHHhhcCccccCcc-ccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHh
Q 038617           80 SCLDKWMAPKKRRLPL-LFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI  158 (484)
Q Consensus        80 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l  158 (484)
                      ...++...... .... .......+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++
T Consensus       119 ~~~~~~~g~~~-~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~  197 (486)
T cd07140         119 GWCDKIQGKTI-PINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTPLTALKFAELT  197 (486)
T ss_pred             HHHHHhcCccc-cccccCCCCceEEEEeeccceEEEEcCCchHHHHHHHHHHHHHHhCCEEEEECCccCcHHHHHHHHHH
Confidence            87766533211 1100 011123578899999999999999999999999999999999999999999999999999999


Q ss_pred             ccc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhc-ccCceeeecCCcCceEEcCCCCCCCHHH
Q 038617          159 PLY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAK-HLTPVTLELGGKCPAILDTLSSPLDIKV  234 (484)
Q Consensus       159 ~~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~-~~~~~~lelgG~~p~iV~~~~~daDl~~  234 (484)
                      .++ +|+|++|+++| +.+.++.|+.|+ ||.|+||||+.+|+.|++.++. ++||+++|+|||||+||++   |||++.
T Consensus       198 ~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~l~~v~lElGGk~~~iV~~---dadl~~  274 (486)
T cd07140         198 VKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKSCAVSNLKKVSLELGGKSPLIIFA---DCDMDK  274 (486)
T ss_pred             HHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCCeEEEEcCCCCceEECC---CCCHHH
Confidence            998 99999999998 567789999998 9999999999999999999986 8999999999999999999   999999


Q ss_pred             HHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-C
Q 038617          235 TVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-A  312 (484)
Q Consensus       235 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~  312 (484)
                      |++.+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++|+++.+ |
T Consensus       275 a~~~i~~~~~~-~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~G  353 (486)
T cd07140         275 AVRMGMSSVFF-NKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEG  353 (486)
T ss_pred             HHHHHHHHHHh-ccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCccCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCC
Confidence            99999999999 99999999999999999999999999999999999999 889999999999999999999999874 7


Q ss_pred             CceeeCCCc-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeC--CHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 038617          313 DAIVHGGLL-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLN--NIQESIEFINSRPKPLAIYAFTKDETFKKQI  389 (484)
Q Consensus       313 ~~~~~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~--~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~  389 (484)
                      +++++||.. +.+|+|++|||+.+++++|++++||+||||++|++|+  |++|||+++|+++|||++||||+|.++++++
T Consensus       354 a~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~  433 (486)
T cd07140         354 ATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLASGVFTKDINKALYV  433 (486)
T ss_pred             CEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCCCCHHHHHHHHhCCCcCceEEEECCCHHHHHHH
Confidence            899999965 3468999999999999999999999999999999998  6999999999999999999999999999999


Q ss_pred             hhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617          390 VSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR  443 (484)
Q Consensus       390 ~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~  443 (484)
                      ++++++|.|+||+...  ..+.+||||+|.||+|+++|.+|+++||+.|++++.
T Consensus       434 ~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~  485 (486)
T cd07140         434 SDKLEAGTVFVNTYNK--TDVAAPFGGFKQSGFGKDLGEEALNEYLKTKTVTIE  485 (486)
T ss_pred             HHhCCcceEEECCCCC--CCCCCCcCCcccCcCCCcchHHHHHHhhcEEEEEEe
Confidence            9999999999998654  456789999999999999999999999999998753


No 17 
>PLN02278 succinic semialdehyde dehydrogenase
Probab=100.00  E-value=2.1e-92  Score=741.04  Aligned_cols=433  Identities=28%  Similarity=0.417  Sum_probs=403.4

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++++++|++|++.|+++|.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.+++++..
T Consensus        58 ~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-Ev~~~i~~~~~~~~~  136 (498)
T PLN02278         58 CMGRAETNDAIASAHDAFPSWSKLTASERSKILRRWYDLIIANKEDLAQLMTLEQGKPLKEAIG-EVAYGASFLEYFAEE  136 (498)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence            4788999999999999999999999999999999999999999999999999999999999974 999999999999998


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      .+++.+..   .+....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..|.+++.++
T Consensus       137 ~~~~~g~~---~~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~l~ea  213 (498)
T PLN02278        137 AKRVYGDI---IPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQA  213 (498)
T ss_pred             HHHhcCcc---cccCCCCceEEEEeecccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHc
Confidence            87764321   111112334577899999999999999999999999999999999999999999999999999999998


Q ss_pred             -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617          162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR  238 (484)
Q Consensus       162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~  238 (484)
                       +|+|++|+++| +.+.++.|++|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++   |||++.|++.
T Consensus       214 glP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~lElGGk~~~iV~~---dAdl~~aa~~  290 (498)
T PLN02278        214 GIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAATVKRVSLELGGNAPFIVFD---DADLDVAVKG  290 (498)
T ss_pred             CCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHHHHHHHHhhcCCcEEEecCCCCeeEECC---CCCHHHHHHH
Confidence             99999999998 456789999997 99999999999999999999999999999999999999999   9999999999


Q ss_pred             HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617          239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV  316 (484)
Q Consensus       239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~  316 (484)
                      +++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++|+++.+ |++++
T Consensus       291 i~~~~f~-~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl  369 (498)
T PLN02278        291 ALASKFR-NSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVL  369 (498)
T ss_pred             HHHHHhc-cCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCccCHHHHHHHHHHHHHHHhCCCEEE
Confidence            9999999 99999999999999999999999999999999999999 889999999999999999999999864 77999


Q ss_pred             eCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccce
Q 038617          317 HGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS  395 (484)
Q Consensus       317 ~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~  395 (484)
                      +||... .+|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++
T Consensus       370 ~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~~~~deai~~~N~~~~gL~a~vft~d~~~~~~~~~~l~~  449 (498)
T PLN02278        370 LGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRVSEALEY  449 (498)
T ss_pred             eCCccCCCCCceEeeEEEecCCCCChhhhCCCcCCEEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCc
Confidence            998653 3689999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617          396 GSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS  444 (484)
Q Consensus       396 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~  444 (484)
                      |.|+||+...+  .+.+||||+|.||+|+++|++|+++||+.|++.++.
T Consensus       450 G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~i~~~~  496 (498)
T PLN02278        450 GIVGVNEGLIS--TEVAPFGGVKQSGLGREGSKYGIDEYLEIKYVCLGN  496 (498)
T ss_pred             CeEEECCCCCC--CCCCCcCCcccCcCCccchHHHHHHhheeEEEEEec
Confidence            99999987653  467899999999999999999999999999987653


No 18 
>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like. NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.
Probab=100.00  E-value=2.4e-92  Score=739.34  Aligned_cols=436  Identities=28%  Similarity=0.384  Sum_probs=401.5

Q ss_pred             CCCHHHHHHHHHHHHHHhHh-cCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRS-GITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALS   80 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~   80 (484)
                      .++.+|+++++++|++||+. |++++.++|.++|++++++|++++++|++++++|+||+..++...|+..+++.++++++
T Consensus        33 ~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~  112 (477)
T cd07113          33 SATEADVDAAVASAWRAFVSAWAKTTPAERGRILLRLADLIEQHGEELAQLETLCSGKSIHLSRAFEVGQSANFLRYFAG  112 (477)
T ss_pred             CCCHHHHHHHHHHHHHHhHhhhccCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            47889999999999999985 99999999999999999999999999999999999999999875699999999999987


Q ss_pred             HHHHhhcCcccc-Ccc-ccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHh
Q 038617           81 CLDKWMAPKKRR-LPL-LFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI  158 (484)
Q Consensus        81 ~~~~~~~~~~~~-~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l  158 (484)
                      ....+....... .+. .......+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~  192 (477)
T cd07113         113 WATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEFTPLTLLRVAELA  192 (477)
T ss_pred             HHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHH
Confidence            766543221100 010 011234578999999999999999999999999999999999999999999999999999999


Q ss_pred             ccc-cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHH
Q 038617          159 PLY-LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTV  236 (484)
Q Consensus       159 ~~a-lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa  236 (484)
                      .++ +|+|++|+++|+.+.++.|++|+ ||+|+||||+.+|+.|++.++++++|+++|+|||||+||++   |||++.|+
T Consensus       193 ~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~lElGGkn~~iV~~---dAdl~~aa  269 (477)
T cd07113         193 KEAGIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVATGKKIGRQAASDLTRVTLELGGKNAAAFLK---DADIDWVV  269 (477)
T ss_pred             HHcCcCCCcEEEEecCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhhcCceEeecCCCCeeEECC---CCCHHHHH
Confidence            998 99999999999545889999998 99999999999999999999999999999999999999999   99999999


Q ss_pred             HHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchh-cCCc
Q 038617          237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPL-VADA  314 (484)
Q Consensus       237 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~-~~~~  314 (484)
                      +.+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++|+++. +|++
T Consensus       270 ~~i~~~~f~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~  348 (477)
T cd07113         270 EGLLTAGFL-HQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDE  348 (477)
T ss_pred             HHHHHHHHh-hCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCE
Confidence            999999999 99999999999999999999999999999999999999 88999999999999999999999986 4789


Q ss_pred             eeeCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcc
Q 038617          315 IVHGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGT  393 (484)
Q Consensus       315 ~~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l  393 (484)
                      +++||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++
T Consensus       349 ~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l  428 (477)
T cd07113         349 IVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTASVWTNNLSKALRYIPRI  428 (477)
T ss_pred             EEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhC
Confidence            99999753 35899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617          394 SSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR  443 (484)
Q Consensus       394 ~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~  443 (484)
                      ++|+|+||.+..  ..+.+||||+|.||+|+++|.+++++||+.|+|+.+
T Consensus       429 ~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~  476 (477)
T cd07113         429 EAGTVWVNMHTF--LDPAVPFGGMKQSGIGREFGSAFIDDYTELKSVMIR  476 (477)
T ss_pred             CcceEEECCCCC--CCCCCCCCCCccccCCccchHHHHHHhhceEEEEEe
Confidence            999999997654  457899999999999999999999999999998764


No 19 
>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.
Probab=100.00  E-value=4.1e-92  Score=736.99  Aligned_cols=432  Identities=27%  Similarity=0.356  Sum_probs=403.1

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++++++|+||++.++...|+..+++.++++++.
T Consensus        34 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~  113 (480)
T cd07559          34 RSTAEDVDLAVDAAHEAFKTWGKTSVAERANILNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGV  113 (480)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            47889999999999999999999999999999999999999999999999999999999999767999999999999887


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      .+......    .....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus       114 ~~~~~~~~----~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~  189 (480)
T cd07559         114 IRAQEGSL----SEIDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSILVLMELIGDL  189 (480)
T ss_pred             HHHhcCcc----ccCCCCceeEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECchhhhHHHHHHHHHHHHh
Confidence            76543211    11112345678999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCC-----CHHH
Q 038617          162 LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPL-----DIKV  234 (484)
Q Consensus       162 lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~da-----Dl~~  234 (484)
                      +|+|++|+++| +.+.++.|++|+ +|.|+||||+.+|+.|++.++++++|+++|+|||||+||++   ||     |++.
T Consensus       190 lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~p~~lElGGk~p~iV~~---dA~~~~~Dl~~  266 (480)
T cd07559         190 LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAENLIPVTLELGGKSPNIFFD---DAMDADDDFDD  266 (480)
T ss_pred             CCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCcEEeccCCCCeEEEcC---CccccccCHHH
Confidence            99999999999 567899999997 99999999999999999999999999999999999999999   99     9999


Q ss_pred             HHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-C
Q 038617          235 TVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-A  312 (484)
Q Consensus       235 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~  312 (484)
                      |++.+++++|. |+||.|++++|||||++++|+|+++|+++++++++|+| ++++++||++++.+++++.++|+++.+ |
T Consensus       267 aa~~i~~~~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~G  345 (480)
T cd07559         267 KAEEGQLGFAF-NQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEG  345 (480)
T ss_pred             HHHHHHHHHHh-hCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCC
Confidence            99999999999 99999999999999999999999999999999999999 889999999999999999999999874 6


Q ss_pred             CceeeCCCcC-----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHH
Q 038617          313 DAIVHGGLLD-----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKK  387 (484)
Q Consensus       313 ~~~~~gg~~~-----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~  387 (484)
                      +++++||...     ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++.
T Consensus       346 a~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~  425 (480)
T cd07559         346 AEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGGGVWTRDINRAL  425 (480)
T ss_pred             CEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHH
Confidence            7999998753     35899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617          388 QIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR  443 (484)
Q Consensus       388 ~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~  443 (484)
                      ++++++++|+|+||+...  ..+.+||||+|.||+|+++|.+|+++||+.|++++.
T Consensus       426 ~~a~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~  479 (480)
T cd07559         426 RVARGIQTGRVWVNCYHQ--YPAHAPFGGYKKSGIGRETHKMMLDHYQQTKNILVS  479 (480)
T ss_pred             HHHHhcCcceEEECCCCC--CCCCCCcCCCccCcCCccChHHHHHHhhceEEEEEe
Confidence            999999999999997643  457899999999999999999999999999998764


No 20 
>PLN02466 aldehyde dehydrogenase family 2 member
Probab=100.00  E-value=7.3e-92  Score=739.69  Aligned_cols=433  Identities=27%  Similarity=0.370  Sum_probs=401.1

Q ss_pred             CCCHHHHHHHHHHHHHHhHh--cCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRS--GITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL   79 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~   79 (484)
                      .++.+|+++|+++|++||+.  |+.++.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.+++++
T Consensus        91 ~~~~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~GK~~~~a~~~Ev~~~~~~l~~~a  170 (538)
T PLN02466         91 EGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPMFARLFRYYA  170 (538)
T ss_pred             CCCHHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence            47899999999999999974  9999999999999999999999999999999999999999987669999999999998


Q ss_pred             HHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617           80 SCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP  159 (484)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~  159 (484)
                      ...++..+...   + ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.
T Consensus       171 ~~~~~~~g~~~---~-~~~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~i~pALaaGN~VVlKPs~~tp~~~~~l~~ll~  246 (538)
T PLN02466        171 GWADKIHGLTV---P-ADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLLH  246 (538)
T ss_pred             HHHHHhcCccc---c-cCCCceEEEEEecceEEEEECCCchHHHHHHHHHhHHHHcCCEEEeECCCCCcHHHHHHHHHHH
Confidence            77665432211   1 1122345789999999999999999999999999999999999999999999999999999999


Q ss_pred             cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhc-ccCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617          160 LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAK-HLTPVTLELGGKCPAILDTLSSPLDIKVT  235 (484)
Q Consensus       160 ~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~-~~~~~~lelgG~~p~iV~~~~~daDl~~a  235 (484)
                      ++ +|+|++|+|+| +.+.+..|++|+ ||.|.||||+.+|+.|++.++. ++||+++|+|||||+||++   |||++.|
T Consensus       247 eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~~aa~~~l~pv~lElGGknp~iV~~---dADl~~A  323 (538)
T PLN02466        247 EAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVTLELGGKSPFIVCE---DADVDKA  323 (538)
T ss_pred             hcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhcCCCcEEEEcCCCCeEEEcC---CCCHHHH
Confidence            99 99999999999 567788999997 9999999999999999999884 8999999999999999999   9999999


Q ss_pred             HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CC
Q 038617          236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-AD  313 (484)
Q Consensus       236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~  313 (484)
                      ++.+++++|. |+||.|++++|+|||+++||+|+++|+++..++++|+| ++++++||++++++++++.++++++.+ |+
T Consensus       324 a~~i~~~~f~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga  402 (538)
T PLN02466        324 VELAHFALFF-NQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGA  402 (538)
T ss_pred             HHHHHHHHHh-hcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCCccCCCHHHHHHHHHHHHHHHHCCC
Confidence            9999999999 99999999999999999999999999999999999999 889999999999999999999999864 67


Q ss_pred             ceeeCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617          314 AIVHGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG  392 (484)
Q Consensus       314 ~~~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~  392 (484)
                      ++++||... ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.+++++
T Consensus       403 ~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~deAi~~aN~~~~GL~a~VfT~d~~~a~~~~~~  482 (538)
T PLN02466        403 TLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFTQNLDTANTLSRA  482 (538)
T ss_pred             EEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHh
Confidence            899998753 3688999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617          393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS  444 (484)
Q Consensus       393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~  444 (484)
                      +++|+|+||+...  ..+.+||||+|.||+|+++|.+|+++|++.|+++...
T Consensus       483 l~aG~v~IN~~~~--~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~  532 (538)
T PLN02466        483 LRVGTVWVNCFDV--FDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTPL  532 (538)
T ss_pred             CCeeeEEECCCCC--CCCCCCcCCCCcCccCcccHHHHHHHhcceEEEEEeC
Confidence            9999999997643  4678999999999999999999999999999997754


No 21 
>PLN02467 betaine aldehyde dehydrogenase
Probab=100.00  E-value=1.1e-91  Score=735.00  Aligned_cols=435  Identities=29%  Similarity=0.429  Sum_probs=404.4

Q ss_pred             CCCHHHHHHHHHHHHHHh-----HhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTF-----RSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAK   76 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~-----~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~   76 (484)
                      .++.+|+++|+++|++||     +.|++++.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.++
T Consensus        41 ~~~~~dv~~av~~A~~a~~~~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~  119 (503)
T PLN02467         41 AATAEDVDAAVEAARKAFKRNKGKDWARTTGAVRAKYLRAIAAKITERKSELAKLETLDCGKPLDEAAW-DMDDVAGCFE  119 (503)
T ss_pred             CCCHHHHHHHHHHHHHHhhhcccchhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHH
Confidence            478899999999999999     8999999999999999999999999999999999999999999984 9999999999


Q ss_pred             HHHHHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHH
Q 038617           77 YALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAE  156 (484)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~  156 (484)
                      +++...+++.+...............+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++
T Consensus       120 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~  199 (503)
T PLN02467        120 YYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASVTCLELAD  199 (503)
T ss_pred             HHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHH
Confidence            99988887644321111111112346789999999999999999999999999999999999999999999999999999


Q ss_pred             Hhccc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHH
Q 038617          157 TIPLY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIK  233 (484)
Q Consensus       157 ~l~~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~  233 (484)
                      ++.++ +|+|++|+++| +.+.++.|+.|+ ||.|+||||+.+|+.|++.++.++||+++|+|||||+||++   |||++
T Consensus       200 ~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~aa~~~~~~~lElGG~~~~iV~~---dADl~  276 (503)
T PLN02467        200 ICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKIMTAAAQMVKPVSLELGGKSPIIVFD---DVDLD  276 (503)
T ss_pred             HHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhccCCcEEEECCCCCceEECC---CCCHH
Confidence            99998 99999999999 567889999998 99999999999999999999999999999999999999999   99999


Q ss_pred             HHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-
Q 038617          234 VTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-  311 (484)
Q Consensus       234 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-  311 (484)
                      .|++.+++++|. |+||.|++++|||||++++|+|+++|.++++++++||| ++++++||++++.+++++.++++++.. 
T Consensus       277 ~A~~~i~~~~f~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~  355 (503)
T PLN02467        277 KAVEWAMFGCFW-TNGQICSATSRLLVHERIASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSE  355 (503)
T ss_pred             HHHHHHHHHHHh-hcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHC
Confidence            999999999999 99999999999999999999999999999999999999 889999999999999999999999864 


Q ss_pred             CCceeeCCCcC---CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHH
Q 038617          312 ADAIVHGGLLD---KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQ  388 (484)
Q Consensus       312 ~~~~~~gg~~~---~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~  388 (484)
                      ++++++||...   ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+.+
T Consensus       356 Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~  435 (503)
T PLN02467        356 GATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDSHYGLAGAVISNDLERCER  435 (503)
T ss_pred             CCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHH
Confidence            77999998653   358999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617          389 IVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR  443 (484)
Q Consensus       389 ~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~  443 (484)
                      +++++++|+|+||+...  ....+||||+|.||+|+++|.+|+++|++.|++...
T Consensus       436 ~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~i~~~  488 (503)
T PLN02467        436 VSEAFQAGIVWINCSQP--CFCQAPWGGIKRSGFGRELGEWGLENYLSVKQVTKY  488 (503)
T ss_pred             HHHhCCcceEEECCCCC--CCCCCCcCCcccCcCCCcchHHHHHHhhCeEEEEEe
Confidence            99999999999998654  356899999999999999999999999999999885


No 22 
>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins. Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD.  In Arabidopsis thaliana, stress-regulated expression of ALDH3I1  was observed in  leaves and osmotic stress expression of  ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.
Probab=100.00  E-value=8.1e-92  Score=724.27  Aligned_cols=428  Identities=64%  Similarity=1.068  Sum_probs=398.3

Q ss_pred             HHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHhhcCc
Q 038617           10 DKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPK   89 (484)
Q Consensus        10 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~   89 (484)
                      +++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.+++++..+..+..+.
T Consensus         3 ~a~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~   82 (432)
T cd07137           3 RLVRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMAPE   82 (432)
T ss_pred             HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            58999999999999999999999999999999999999999999999999998876699999999999999887766543


Q ss_pred             cccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccccCccceee
Q 038617           90 KRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKV  169 (484)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~alp~g~v~~  169 (484)
                      ....+....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..++++|.+++|+|++|+
T Consensus        83 ~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~~~P~gvv~~  162 (432)
T cd07137          83 KVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEYLDTKAIKV  162 (432)
T ss_pred             ccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHHhCCcCeEEE
Confidence            21111111233567899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHhhc-ccCC
Q 038617          170 TNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKF-ASCN  248 (484)
Q Consensus       170 v~g~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~~~-~~~~  248 (484)
                      ++|+.+.++.|++|++|.|+||||+.+|+.|.+.++++++|+++|+|||||+||++   |||++.|++.+++++| . |+
T Consensus       163 v~g~~~~~~~L~~~~i~~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~np~iV~~---dAdl~~aa~~i~~~~f~~-~~  238 (432)
T cd07137         163 IEGGVPETTALLEQKWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDS---TVDLKVAVRRIAGGKWGC-NN  238 (432)
T ss_pred             EeCCHHHHHHHHhCCCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEEcC---CCCHHHHHHHHHHHhhhc-cC
Confidence            99977888999988899999999999999999999999999999999999999999   9999999999999999 8 99


Q ss_pred             CCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCCCcCCCCCee
Q 038617          249 GQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLDKENLFI  328 (484)
Q Consensus       249 Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~  328 (484)
                      ||.|++++|+|||++++|+|+++|+++++++++|||++++++||++++.+++++.++++++..++++++||..+.+|+|+
T Consensus       239 GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~~a~~ga~~l~gg~~~~~g~~~  318 (432)
T cd07137         239 GQACIAPDYVLVEESFAPTLIDALKNTLEKFFGENPKESKDLSRIVNSHHFQRLSRLLDDPSVADKIVHGGERDEKNLYI  318 (432)
T ss_pred             CCcccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCCCCccCCcCCcCCHHHHHHHHHHHHHHHhCCeEEeCCCcCCCCCEE
Confidence            99999999999999999999999999999999999977889999999999999999999987778899998765568999


Q ss_pred             eeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEEECCCccccC
Q 038617          329 EPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQL  408 (484)
Q Consensus       329 ~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~  408 (484)
                      .|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+.++++++++|.|+||++..+..
T Consensus       319 ~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~  398 (432)
T cd07137         319 EPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFNDTVVQYA  398 (432)
T ss_pred             eeEEEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcCcEEECCcccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999998765445


Q ss_pred             CCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617          409 CDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM  441 (484)
Q Consensus       409 ~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~  441 (484)
                      .+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus       399 ~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~  431 (432)
T cd07137         399 IDTLPFGGVGESGFGAYHGKFSFDAFSHKKAVL  431 (432)
T ss_pred             CCCCCCCCcCcCcCCccccHHHHHHhccCceee
Confidence            578999999999999999999999999999875


No 23 
>PLN02315 aldehyde dehydrogenase family 7 member
Probab=100.00  E-value=9e-92  Score=735.03  Aligned_cols=433  Identities=22%  Similarity=0.290  Sum_probs=398.4

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++|+++|++||+.|++++.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++.+++++..
T Consensus        52 ~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~GK~~~~a~-~ev~~~i~~~~~~~~~  130 (508)
T PLN02315         52 EASLEDYEEGLRACEEAAKIWMQVPAPKRGEIVRQIGDALRAKLDYLGRLVSLEMGKILAEGI-GEVQEIIDMCDFAVGL  130 (508)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence            478899999999999999999999999999999999999999999999999999999999996 5999999999999987


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHH----HHHH
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASF----LAET  157 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~----l~~~  157 (484)
                      .+++.+...   +....+...+..++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..    +.++
T Consensus       131 ~~~l~~~~~---~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~  207 (508)
T PLN02315        131 SRQLNGSII---PSERPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKLVAEV  207 (508)
T ss_pred             HHHhcCccc---cCCCCCceeEEEEecceEEEEECCCcchHHHHHHHHhHHHHcCCEEEeeCCCcChHHHHHHHHHHHHH
Confidence            766533211   111112344678999999999999999999999999999999999999999999999887    5677


Q ss_pred             hccc-cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617          158 IPLY-LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVT  235 (484)
Q Consensus       158 l~~a-lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~a  235 (484)
                      +.++ +|+|++|+++|+.+.++.|++|+ +|+|.||||+++|+.|++.++++++|+++|+|||||+||++   |||++.|
T Consensus       208 ~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~fTGS~~~G~~v~~~aa~~~~~~~lElgGknp~iV~~---dADl~~A  284 (508)
T PLN02315        208 LEKNNLPGAIFTSFCGGAEIGEAIAKDTRIPLVSFTGSSKVGLMVQQTVNARFGKCLLELSGNNAIIVMD---DADIQLA  284 (508)
T ss_pred             HHHcCCCcccEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCCEEEecCCCCeEEECC---CCCHHHH
Confidence            7888 99999999999777899999997 99999999999999999999999999999999999999999   9999999


Q ss_pred             HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CC
Q 038617          236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-AD  313 (484)
Q Consensus       236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~  313 (484)
                      ++.+++++|. |+||.|++++|+|||+++||+|+++|+++++++++|+| ++++.+||++++.+.+++.++++++.+ |+
T Consensus       285 a~~i~~~~f~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga  363 (508)
T PLN02315        285 VRSVLFAAVG-TAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGG  363 (508)
T ss_pred             HHHHHHHHHH-hcCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCC
Confidence            9999999999 99999999999999999999999999999999999999 888999999999999999999999874 78


Q ss_pred             ceeeCCCc-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh-
Q 038617          314 AIVHGGLL-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS-  391 (484)
Q Consensus       314 ~~~~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~-  391 (484)
                      ++++||.. +.+|+|++|||+ +++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++ 
T Consensus       364 ~vl~gG~~~~~~g~~~~Ptvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~a~Vft~d~~~a~~~~~~  442 (508)
T PLN02315        364 KILTGGSAIESEGNFVQPTIV-EISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFTRNPETIFKWIGP  442 (508)
T ss_pred             EEEECCCcCCCCCeEEecEEE-ecCCCChHHhCCCcCCEEEEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHhhh
Confidence            89999975 346899999999 599999999999999999999999999999999999999999999999999999984 


Q ss_pred             -ccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617          392 -GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS  444 (484)
Q Consensus       392 -~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~  444 (484)
                       ++++|+|+||.++.+ ..+.+||||+|.||+|+++|.+++++||+.|+|+...
T Consensus       443 ~~l~~G~v~iN~~~~~-~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~~  495 (508)
T PLN02315        443 LGSDCGIVNVNIPTNG-AEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINY  495 (508)
T ss_pred             cccceeEEEEcCCCCC-CCCCCCCCccccccCCccchHHHHHHHhhEEEEEEec
Confidence             799999999986542 3567899999999999999999999999999988763


No 24 
>PRK13252 betaine aldehyde dehydrogenase; Provisional
Probab=100.00  E-value=9.7e-92  Score=736.73  Aligned_cols=433  Identities=27%  Similarity=0.341  Sum_probs=402.9

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++++++|++|++.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++..|+..+++.+++++..
T Consensus        40 ~~~~~dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~  119 (488)
T PRK13252         40 AATPADVEAAVASAKQGQKIWAAMTAMERSRILRRAVDILRERNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGL  119 (488)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            47889999999999999999999999999999999999999999999999999999999999766999999999999987


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      .+...+.. .  .. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.++
T Consensus       120 ~~~~~g~~-~--~~-~~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~a  195 (488)
T PRK13252        120 APALEGEQ-I--PL-RGGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEA  195 (488)
T ss_pred             HHHhcCce-e--cc-CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHhcCCeEEEeCCccCcHHHHHHHHHHHHc
Confidence            76542211 1  11 12345678999999999999999999999999999999999999999999999999999999998


Q ss_pred             -cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617          162 -LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI  239 (484)
Q Consensus       162 -lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i  239 (484)
                       +|+|+||+++|+.+.++.|+.|+ +|+|+||||+.+|+.|.+.++.+++|+++|+|||||+||++   |||++.|++.+
T Consensus       196 glP~g~v~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~aa~~l~~~~lElgG~~p~iV~~---dAdl~~A~~~i  272 (488)
T PRK13252        196 GLPDGVFNVVQGDGRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAASLKEVTMELGGKSPLIVFD---DADLDRAADIA  272 (488)
T ss_pred             CcCcccEEEEecCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEEcCCCCeeEECC---CCCHHHHHHHH
Confidence             99999999999656889999998 99999999999999999999999999999999999999999   99999999999


Q ss_pred             HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCceee
Q 038617          240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIVH  317 (484)
Q Consensus       240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~  317 (484)
                      ++++|. |+||.|++++|||||+++||+|+++|+++++++++||| ++++++||++++.++++++++++++.. |+++++
T Consensus       273 ~~~~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~  351 (488)
T PRK13252        273 MLANFY-SSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLC  351 (488)
T ss_pred             HHHHHh-hcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEe
Confidence            999999 99999999999999999999999999999999999999 889999999999999999999998864 779999


Q ss_pred             CCCcC-----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617          318 GGLLD-----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG  392 (484)
Q Consensus       318 gg~~~-----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~  392 (484)
                      ||...     ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.+++++
T Consensus       352 gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~I~t~d~~~~~~~~~~  431 (488)
T PRK13252        352 GGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFTADLSRAHRVIHQ  431 (488)
T ss_pred             CCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHh
Confidence            98642     3589999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617          393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS  444 (484)
Q Consensus       393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~  444 (484)
                      +++|+|+||+...  ..+.+||||+|.||+|+++|.+|+++||+.|+|++..
T Consensus       432 l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~~~  481 (488)
T PRK13252        432 LEAGICWINTWGE--SPAEMPVGGYKQSGIGRENGIATLEHYTQIKSVQVEM  481 (488)
T ss_pred             cCccEEEECCCCC--CCCCCCCCCCccCcCCcCChHHHHHHhcceEEEEEeC
Confidence            9999999998553  4567899999999999999999999999999998753


No 25 
>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase. Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.
Probab=100.00  E-value=1.2e-91  Score=734.72  Aligned_cols=436  Identities=27%  Similarity=0.358  Sum_probs=400.9

Q ss_pred             CCCHHHHHHHHHHHHHHhHh-cCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRS-GITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALS   80 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~   80 (484)
                      .++.+|+++++++|++||+. |+++|.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.++++++
T Consensus        32 ~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~  111 (481)
T TIGR03216        32 EAGAAEVDAAVAAARAALKGPWGKMTVAERADLLYAVADEIERRFDDFLAAEVADTGKPRSLASHLDIPRGAANFRVFAD  111 (481)
T ss_pred             CCCHHHHHHHHHHHHHHhHhhHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHhHHHHHHHHHHHHHHHH
Confidence            47889999999999999997 99999999999999999999999999999999999999998875699999999999988


Q ss_pred             HHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhcc
Q 038617           81 CLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPL  160 (484)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~  160 (484)
                      ..+...............+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.+++.+
T Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~~~~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~  191 (481)
T TIGR03216       112 VVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGTATLLGEVMNA  191 (481)
T ss_pred             HHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHH
Confidence            87654322110000011123457889999999999999999999999999999999999999999999999999999999


Q ss_pred             c-cCccceeeccC-Ch-hHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHH
Q 038617          161 Y-LDCKAIKVTNG-GV-DVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTV  236 (484)
Q Consensus       161 a-lp~g~v~~v~g-~~-~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa  236 (484)
                      + +|+|++|+++| +. +.++.|..|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++   |||++.|+
T Consensus       192 aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~~~aa~~~~~~~lElgG~n~~iV~~---dadl~~aa  268 (481)
T TIGR03216       192 VGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAAADGVKPVSFELGGKNAAIVFA---DCDFDAAV  268 (481)
T ss_pred             cCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhcCCCeEEEECCCCCeEEECC---CCCHHHHH
Confidence            8 99999999998 44 4778888887 99999999999999999999999999999999999999999   99999999


Q ss_pred             HHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCc
Q 038617          237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADA  314 (484)
Q Consensus       237 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~  314 (484)
                      +.+++++|. |+||.|++++++|||++++|+|+++|.+++.++++|+| ++++++||++++.+++++.++++++.+ |++
T Consensus       269 ~~i~~~~f~-~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~  347 (481)
T TIGR03216       269 AGILRSAFL-NTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGAT  347 (481)
T ss_pred             HHHHHHHHh-cCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCE
Confidence            999999999 99999999999999999999999999999999999999 889999999999999999999999874 779


Q ss_pred             eeeCCCcC------CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHH
Q 038617          315 IVHGGLLD------KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQ  388 (484)
Q Consensus       315 ~~~gg~~~------~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~  388 (484)
                      +++||..+      .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+++
T Consensus       348 v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~  427 (481)
T TIGR03216       348 VVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVWTEDLSRAHR  427 (481)
T ss_pred             EEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEEEECCCHHHHHH
Confidence            99998653      368999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617          389 IVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR  443 (484)
Q Consensus       389 ~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~  443 (484)
                      +++++++|+|+||+...+  .+.+||||+|.||+|+++|.+++++||+.|+++++
T Consensus       428 ~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~~~  480 (481)
T TIGR03216       428 VARQMEVGIVWVNSWFLR--DLRTPFGGSKLSGIGREGGVHSLEFYTELTNVCIK  480 (481)
T ss_pred             HHHhcCccEEEECCCCCC--CCCCCcCCcccCcCCcCchHHHHHHhhceEEEEEe
Confidence            999999999999987653  57789999999999999999999999999998753


No 26 
>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins. NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1  (ALDH3A1, ALDH3B1,  EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.
Probab=100.00  E-value=2.5e-91  Score=723.51  Aligned_cols=440  Identities=49%  Similarity=0.832  Sum_probs=404.9

Q ss_pred             HHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHhhcCc
Q 038617           10 DKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPK   89 (484)
Q Consensus        10 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~   89 (484)
                      +|+++|++||+.|+.++..+|.++|++++++|++++++|++++++|+|||..++...|+..+++.++++++.++++....
T Consensus         2 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~   81 (443)
T cd07132           2 EAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMKPE   81 (443)
T ss_pred             hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            57899999999999999999999999999999999999999999999999999876799999999999999998886543


Q ss_pred             cccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccccCccceee
Q 038617           90 KRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKV  169 (484)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~alp~g~v~~  169 (484)
                      .............++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.+++.+++|+|++|+
T Consensus        82 ~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~lp~gv~~v  161 (443)
T cd07132          82 PVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKYLDKECYPV  161 (443)
T ss_pred             cCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHhCCcCeEEE
Confidence            22111111223568899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHhhcccCCC
Q 038617          170 TNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNG  249 (484)
Q Consensus       170 v~g~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~~~~~~~G  249 (484)
                      ++|+.+.+..|+.+.||.|+||||+.+|+.|.+.++++++|+++|+|||||+||++   |||++.|++.+++++|. |+|
T Consensus       162 v~g~~~~~~~l~~~~vd~V~fTGs~~~g~~i~~~a~~~~~~~~lElgG~~p~iV~~---dADl~~aa~~i~~~~f~-~~G  237 (443)
T cd07132         162 VLGGVEETTELLKQRFDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDK---SCDIDVAARRIAWGKFI-NAG  237 (443)
T ss_pred             EeCCHHHHHHHHhCCCCEEEEECChHHHHHHHHHHHhhCCceEEEcCCCCceEEcC---CCCHHHHHHHHHHHHHh-cCC
Confidence            99977677788876799999999999999999999999999999999999999999   99999999999999999 999


Q ss_pred             CccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCCCcCCCCCeee
Q 038617          250 QVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLDKENLFIE  329 (484)
Q Consensus       250 q~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~  329 (484)
                      |.|++++|+|||++++|+|+++|.+++.++++|+|++++++||++++.+++++.+++++    +++++||..+.+++|+.
T Consensus       238 Q~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~v~~~i~~----a~~~~gg~~~~~~~~~~  313 (443)
T cd07132         238 QTCIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDPKESPDYGRIINDRHFQRLKKLLSG----GKVAIGGQTDEKERYIA  313 (443)
T ss_pred             CceeCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCCCcccccCCcCCHHHHHHHHHHHhC----CEEEeCCccCCCCCEEe
Confidence            99999999999999999999999999999998888888999999999999999999985    47889987655689999


Q ss_pred             eEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEEECCCccccCC
Q 038617          330 PTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLC  409 (484)
Q Consensus       330 Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~  409 (484)
                      |||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+.++++++++|.|+||+...+...
T Consensus       314 Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN~~~~~~~~  393 (443)
T cd07132         314 PTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTIMHYTL  393 (443)
T ss_pred             eEEEeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcccccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999987765445


Q ss_pred             CCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecCcCCC--CCCCCCCc
Q 038617          410 DVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSFFLEL--EPRYPPWN  457 (484)
Q Consensus       410 ~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~~~~--~~~~~p~~  457 (484)
                      +.+||||+|.||+|+++|.+|+++|++.|+++.++...+.  +++|+|++
T Consensus       394 ~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~~~~~~~~~~~~~~~~~  443 (443)
T cd07132         394 DSLPFGGVGNSGMGAYHGKYSFDTFSHKRSCLVKSLNMEKLNSLRYPPYS  443 (443)
T ss_pred             CCCCCCCCCcccCCCcccHHHHHHhccccEEEEccccccccccccCCCCC
Confidence            7899999999999999999999999999999877632243  78899874


No 27 
>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins. Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.
Probab=100.00  E-value=1.9e-91  Score=722.28  Aligned_cols=433  Identities=46%  Similarity=0.780  Sum_probs=402.9

Q ss_pred             CCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHH
Q 038617            3 AAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCL   82 (484)
Q Consensus         3 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~   82 (484)
                      .+.+|+++|+++|++|++.|+.++.++|.++|+++++.|++++++|+++++.|+|||..++...|+..+++.+++++..+
T Consensus         2 ~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~   81 (436)
T cd07135           2 TPLDEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLKNL   81 (436)
T ss_pred             CCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999999999999999999999987569999999999999988


Q ss_pred             HHhhcCccccCcc-ccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           83 DKWMAPKKRRLPL-LFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        83 ~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      +++...+...... ...+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.+.
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~~~  161 (436)
T cd07135          82 KKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPKY  161 (436)
T ss_pred             HHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHHh
Confidence            8775443221100 012345678999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCccceeeccCChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHH
Q 038617          162 LDCKAIKVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIG  241 (484)
Q Consensus       162 lp~g~v~~v~g~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~  241 (484)
                      +|+|++|+++|+.+....|+.|++|.|.||||+.+|+.|++.++.+++|+++|+|||||+||++   |||++.|++.+++
T Consensus       162 lP~g~v~vv~g~~~~~~~l~~~~vd~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~---dADl~~aa~~i~~  238 (436)
T cd07135         162 LDPDAFQVVQGGVPETTALLEQKFDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTK---NADLELAAKRILW  238 (436)
T ss_pred             CCcCEEEEEcCCchhHHHHHhCCCCEEEEECCcHHHHHHHHHHHhcCCCeEEEccCCCcEEECC---CCCHHHHHHHHHH
Confidence            9999999999865555678888899999999999999999999999999999999999999999   9999999999999


Q ss_pred             hhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCCCc
Q 038617          242 GKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLL  321 (484)
Q Consensus       242 ~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~~  321 (484)
                      ++|. |+||.|+++++||||++++|+|+++|+++++++++|+|++++++||++++.+.+++.++++++  ++++++||..
T Consensus       239 ~~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~v~~a--g~~v~~gg~~  315 (436)
T cd07135         239 GKFG-NAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGANASPDYTRIVNPRHFNRLKSLLDTT--KGKVVIGGEM  315 (436)
T ss_pred             HHhc-cCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCCCCCCCcCCCCCHHHHHHHHHHHHhc--CCeEEECCCc
Confidence            9999 999999999999999999999999999999999999988888999999999999999999987  7899999977


Q ss_pred             CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEEEC
Q 038617          322 DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFN  401 (484)
Q Consensus       322 ~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN  401 (484)
                      +.+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||
T Consensus       316 ~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN  395 (436)
T cd07135         316 DEATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGVVIN  395 (436)
T ss_pred             CCCCCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCcCeEEEC
Confidence            66799999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617          402 DTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM  441 (484)
Q Consensus       402 ~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~  441 (484)
                      +.+.+...+.+||||+|.||+|+++|.+|+++|++.|++.
T Consensus       396 ~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~  435 (436)
T cd07135         396 DTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDTFTHERTVV  435 (436)
T ss_pred             CccccccCCCCCcCCcCcccCCccccHhHHHHhccccccc
Confidence            8776555678999999999999999999999999999873


No 28 
>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like. Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.
Probab=100.00  E-value=2.1e-91  Score=732.08  Aligned_cols=431  Identities=24%  Similarity=0.351  Sum_probs=402.7

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++++++|++|++.|++++.++|.++|++++++|++++++|++++++|+|||..+++. |+..+++.+++++..
T Consensus        33 ~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~  111 (473)
T cd07097          33 RASAEDADAAIAAAAAAFPAWRRTSPEARADILDKAGDELEARKEELARLLTREEGKTLPEARG-EVTRAGQIFRYYAGE  111 (473)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence            5788999999999999999999999999999999999999999999999999999999999985 999999999999988


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      .+++.+...   .....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus       112 ~~~~~g~~~---~~~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a  188 (473)
T cd07097         112 ALRLSGETL---PSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASAWALVEILEEA  188 (473)
T ss_pred             HHHhcCccc---ccCCCCceEEEEEEeeeeEEEEcccChHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHc
Confidence            877643321   11112345688999999999999999999999999999999999999999999999999999999998


Q ss_pred             -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617          162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR  238 (484)
Q Consensus       162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~  238 (484)
                       +|+|++|+++| +.+.+..|++|+ +|.|.||||+.+|+.|++.+++++||+++|+|||||+||++   |||++.|++.
T Consensus       189 GlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~---dadl~~aa~~  265 (473)
T cd07097         189 GLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAARGARVQLEMGGKNPLVVLD---DADLDLAVEC  265 (473)
T ss_pred             CCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCcEEEECCCCCeeEECC---CCCHHHHHHH
Confidence             99999999999 456889999997 99999999999999999999999999999999999999999   9999999999


Q ss_pred             HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchh-cCCcee
Q 038617          239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPL-VADAIV  316 (484)
Q Consensus       239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~-~~~~~~  316 (484)
                      +++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++|+++. +|++++
T Consensus       266 i~~~~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~  344 (473)
T cd07097         266 AVQGAFF-STGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLV  344 (473)
T ss_pred             HHHHHHh-ccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEE
Confidence            9999999 99999999999999999999999999999999999999 88999999999999999999999987 478999


Q ss_pred             eCCCcC---CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcc
Q 038617          317 HGGLLD---KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGT  393 (484)
Q Consensus       317 ~gg~~~---~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l  393 (484)
                      +||...   ..|+|++|||+.++++++++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+.++++++
T Consensus       345 ~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l  424 (473)
T cd07097         345 YGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHATHFKRRV  424 (473)
T ss_pred             eCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhC
Confidence            998653   25789999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceeeEEECCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEE
Q 038617          394 SSGSLIFNDTLVQQLCDVLPFGGVGQSGIG-RYHGHYSFETFSHEKAIM  441 (484)
Q Consensus       394 ~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~  441 (484)
                      ++|+|+||+++.+ ..+.+||||+|.||+| +++|.+|+++|++.|+|.
T Consensus       425 ~~g~v~iN~~~~~-~~~~~PfGG~~~SG~G~~~~g~~~l~~f~~~k~v~  472 (473)
T cd07097         425 EAGVVMVNLPTAG-VDYHVPFGGRKGSSYGPREQGEAALEFYTTIKTVY  472 (473)
T ss_pred             CcCeEEECCCCCC-CCCCCCCCCcccccCcccCCcHHHHHHhhceeEEe
Confidence            9999999987654 3468999999999999 899999999999999985


No 29 
>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=100.00  E-value=2.3e-91  Score=732.54  Aligned_cols=434  Identities=25%  Similarity=0.371  Sum_probs=404.4

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++++++|++|+++|++++.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.+++++..
T Consensus        35 ~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~  114 (475)
T PRK13473         35 EASAAQVDAAVAAADAAFPEWSQTTPKERAEALLKLADAIEENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGA  114 (475)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            47889999999999999999999999999999999999999999999999999999999888656999999999999887


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      .+.+.+....   ....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus       115 ~~~~~g~~~~---~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a  191 (475)
T PRK13473        115 ARCLEGKAAG---EYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPLTALKLAELAADI  191 (475)
T ss_pred             HHHhcCcccc---cCCCCceeEEEEecceeEEEEccCChHHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHh
Confidence            7665332211   1112335678999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617          162 LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI  239 (484)
Q Consensus       162 lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i  239 (484)
                      +|+|++|+++| +.+.+..|++|+ +|.|+||||+++|+.|++.++.+++|+++|+|||||+||++   |||+|.|++.+
T Consensus       192 lP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~---dADld~Aa~~i  268 (475)
T PRK13473        192 LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAADSVKRTHLELGGKAPVIVFD---DADLDAVVEGI  268 (475)
T ss_pred             CCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCeeEECC---CCCHHHHHHHH
Confidence            99999999999 678899999997 99999999999999999999999999999999999999999   99999999999


Q ss_pred             HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-C-Ccee
Q 038617          240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-A-DAIV  316 (484)
Q Consensus       240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~-~~~~  316 (484)
                      ++++|. |+||.|++++|||||++++|+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ | ++++
T Consensus       269 ~~~~f~-n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~G~a~v~  347 (475)
T PRK13473        269 RTFGYY-NAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVV  347 (475)
T ss_pred             HHHHHh-cCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEE
Confidence            999999 99999999999999999999999999999999999999 889999999999999999999999875 5 7999


Q ss_pred             eCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccce
Q 038617          317 HGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS  395 (484)
Q Consensus       317 ~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~  395 (484)
                      +||... ..|+|+.|||+.++++++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++
T Consensus       348 ~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~  427 (475)
T PRK13473        348 TGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGLASSVWTRDVGRAHRVSARLQY  427 (475)
T ss_pred             ECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCc
Confidence            999764 3588999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617          396 GSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS  444 (484)
Q Consensus       396 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~  444 (484)
                      |+|+||++..  ..+.+||||+|.||+|+++|.+|+++||+.|++++.+
T Consensus       428 G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~~t~~k~i~~~~  474 (475)
T PRK13473        428 GCTWVNTHFM--LVSEMPHGGQKQSGYGKDMSLYGLEDYTVVRHVMVKH  474 (475)
T ss_pred             ceEEECCCCC--CCCCCCCCCccccccCccchHHHHHHHhceEEEEEec
Confidence            9999998765  3567999999999999999999999999999998764


No 30 
>TIGR01780 SSADH succinate-semialdehyde dehydrogenase. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).
Probab=100.00  E-value=1.9e-91  Score=727.64  Aligned_cols=427  Identities=27%  Similarity=0.391  Sum_probs=397.6

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++++++|++|++.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++. |+..++..+++++..
T Consensus        15 ~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~   93 (448)
T TIGR01780        15 DQGVEEAEAAIRAAYEAFKTWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKEAKG-EILYAASFLEWFAEE   93 (448)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence            4788999999999999999999999999999999999999999999999999999999999974 999999999998877


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      .+++.+...   +....+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.++
T Consensus        94 ~~~~~~~~~---~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~a  170 (448)
T TIGR01780        94 AKRVYGDTI---PSPQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQA  170 (448)
T ss_pred             HHHhcCccc---cCCCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccchHHHHHHHHHHHHc
Confidence            766543211   11112335567889999999999999999999999999999999999999999999999999999999


Q ss_pred             -cCccceeeccCC--hhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHH
Q 038617          162 -LDCKAIKVTNGG--VDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVK  237 (484)
Q Consensus       162 -lp~g~v~~v~g~--~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~  237 (484)
                       +|+|++|+++|+  .+.++.|++|+ +|.|+||||+.+|+.|++.++.++||+++|+|||||+||++   |+|++.|++
T Consensus       171 GlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa~~~~~~~lElGGk~~~iV~~---dadl~~aa~  247 (448)
T TIGR01780       171 GIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELGGNAPFIVFD---DADIDQAVE  247 (448)
T ss_pred             CCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEECC---CCCHHHHHH
Confidence             999999999985  56789999997 99999999999999999999999999999999999999999   999999999


Q ss_pred             HHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCce
Q 038617          238 RIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAI  315 (484)
Q Consensus       238 ~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~  315 (484)
                      .+++++|. |+||.|+++++||||+++||+|+++|.++++++++|+| ++++++||++++.+++++.++|+++.+ |+++
T Consensus       248 ~iv~~~f~-~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~i  326 (448)
T TIGR01780       248 GAMASKFR-NAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHIADAVEKGAKV  326 (448)
T ss_pred             HHHHHHHH-hcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEE
Confidence            99999999 99999999999999999999999999999999999999 889999999999999999999999874 7799


Q ss_pred             eeCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccc
Q 038617          316 VHGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTS  394 (484)
Q Consensus       316 ~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~  394 (484)
                      ++||..+ .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+++++++++
T Consensus       327 l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~~~vfs~d~~~~~~~~~~l~  406 (448)
T TIGR01780       327 VTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLATIWRVAEALE  406 (448)
T ss_pred             EeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCC
Confidence            9999754 358899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhcc
Q 038617          395 SGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEK  438 (484)
Q Consensus       395 ~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k  438 (484)
                      +|.|+||+...  ..+.+||||+|.||+|+++|.+++++|++.|
T Consensus       407 ~G~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k  448 (448)
T TIGR01780       407 YGMVGINTGLI--SNVVAPFGGVKQSGLGREGSKYGIEEYLETK  448 (448)
T ss_pred             ccEEEECCCCC--CCCCCCCCCcccccCCccchHHHHHHHhccC
Confidence            99999998764  3567899999999999999999999999865


No 31 
>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like. Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.
Probab=100.00  E-value=3.7e-91  Score=727.39  Aligned_cols=431  Identities=23%  Similarity=0.333  Sum_probs=400.2

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|++++++.|++|++.|+.+|.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++.++++++.
T Consensus        15 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~   93 (456)
T cd07107          15 AASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSAML-GDVMVAAALLDYFAGL   93 (456)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence            478899999999999999999999999999999999999999999999999999999999986 5999999999999876


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      ...+ .++....   ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.++
T Consensus        94 ~~~~-~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~~  169 (456)
T cd07107          94 VTEL-KGETIPV---GGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREV  169 (456)
T ss_pred             HHHh-CCccccC---CCCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChHHHHHHHHHHHHh
Confidence            6543 3222111   12335678999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCccceeeccCC-hhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617          162 LDCKAIKVTNGG-VDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI  239 (484)
Q Consensus       162 lp~g~v~~v~g~-~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i  239 (484)
                      +|+|++|+++|+ .+.++.|++|+ +|+|.||||+++|+.|++.++++++|+++|+|||||+||++   |||++.|++.+
T Consensus       170 lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~---dadl~~Aa~~i  246 (456)
T cd07107         170 LPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNALIVFP---DADPEAAADAA  246 (456)
T ss_pred             CCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcCCCeEEEECCCCCeEEECC---CCCHHHHHHHH
Confidence            999999999984 56789999998 99999999999999999999999999999999999999999   99999999999


Q ss_pred             HHhh-cccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617          240 IGGK-FASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV  316 (484)
Q Consensus       240 ~~~~-~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~  316 (484)
                      ++++ |. |+||.|++++|||||+++||+|+++|++++.++++|+| ++++++||++++.+++++.++|+++.+ |++++
T Consensus       247 ~~~~~f~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~  325 (456)
T cd07107         247 VAGMNFT-WCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYIDSAKREGARLV  325 (456)
T ss_pred             HHhchhh-cCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHHHHHHHHHHHCCCEEE
Confidence            9996 88 99999999999999999999999999999999999999 889999999999999999999998864 67999


Q ss_pred             eCCCcC-----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh
Q 038617          317 HGGLLD-----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS  391 (484)
Q Consensus       317 ~gg~~~-----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~  391 (484)
                      +||...     ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++
T Consensus       326 ~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~  405 (456)
T cd07107         326 TGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTAR  405 (456)
T ss_pred             eCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHHHHHHHHhCCCCcceEEEECCCHHHHHHHHH
Confidence            999642     358999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617          392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR  443 (484)
Q Consensus       392 ~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~  443 (484)
                      ++++|+|+||++..+  .+.+||||+|.||+|+++|++|+++||+.|+++++
T Consensus       406 ~l~~G~v~iN~~~~~--~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~v~~~  455 (456)
T cd07107         406 RVEAGYVWINGSSRH--FLGAPFGGVKNSGIGREECLEELLSYTQEKNVNVR  455 (456)
T ss_pred             hcCcCEEEECCCCCC--CCCCCcCCcccccCCcCchHHHHHHhhceEEEEEe
Confidence            999999999987753  56899999999999999999999999999998753


No 32 
>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like. Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3),  which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.
Probab=100.00  E-value=4.9e-91  Score=729.25  Aligned_cols=430  Identities=27%  Similarity=0.377  Sum_probs=399.0

Q ss_pred             CCCHHHHHHHHHHHHHHhHh--cCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRS--GITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL   79 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~   79 (484)
                      .++.+|+++++++|++||+.  |++++.++|.++|++++++|++++++|++++++|+|||..+++..|+..+++.+++++
T Consensus        37 ~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a  116 (476)
T cd07142          37 EGDAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYA  116 (476)
T ss_pred             CCCHHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence            47899999999999999975  9999999999999999999999999999999999999999987669999999999998


Q ss_pred             HHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617           80 SCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP  159 (484)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~  159 (484)
                      ...+...+..   .+ ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.
T Consensus       117 ~~~~~~~g~~---~~-~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~  192 (476)
T cd07142         117 GWADKIHGMT---LP-ADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQTPLSALLAAKLAA  192 (476)
T ss_pred             HHHHHhcCcc---cc-cCCCceEEEEEeceeeEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcccHHHHHHHHHHH
Confidence            7765543221   11 1112345788999999999999999999999999999999999999999999999999999999


Q ss_pred             cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhc-ccCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617          160 LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAK-HLTPVTLELGGKCPAILDTLSSPLDIKVT  235 (484)
Q Consensus       160 ~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~-~~~~~~lelgG~~p~iV~~~~~daDl~~a  235 (484)
                      ++ +|+|++|+++| +.+.++.|++|+ +|.|+||||+.+|+.|++.++. +++|+++|+|||||+||++   |||++.|
T Consensus       193 ~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~~aa~~~~~~v~lElgGk~p~iV~~---dADl~~A  269 (476)
T cd07142         193 EAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAAKSNLKPVTLELGGKSPFIVCE---DADVDKA  269 (476)
T ss_pred             HcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHHcCCCeEEEECCCCCeeEECC---CCCHHHH
Confidence            99 99999999999 556888999987 9999999999999999999986 8999999999999999999   9999999


Q ss_pred             HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CC
Q 038617          236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-AD  313 (484)
Q Consensus       236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~  313 (484)
                      ++.+++++|. |+||.|++++|||||+++||+|+++|.+++.++++|+| ++++++||++++.+++++.++++++.+ |+
T Consensus       270 a~~i~~~~f~-~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga  348 (476)
T cd07142         270 VELAHFALFF-NQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGA  348 (476)
T ss_pred             HHHHHHHHhc-CCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCcCcCHHHHHHHHHHHHHHHhCCC
Confidence            9999999999 99999999999999999999999999999999999999 888999999999999999999998864 67


Q ss_pred             ceeeCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617          314 AIVHGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG  392 (484)
Q Consensus       314 ~~~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~  392 (484)
                      ++++||... .+|+|+.|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+.+++++
T Consensus       349 ~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~a~~~~~~  428 (476)
T cd07142         349 TLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAGVFSKNIDTANTLSRA  428 (476)
T ss_pred             EEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHh
Confidence            999999753 4689999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617          393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM  441 (484)
Q Consensus       393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~  441 (484)
                      +++|+|+||+...  ..+.+||||+|.||+|+++|.+++++||+.|+++
T Consensus       429 l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~  475 (476)
T cd07142         429 LKAGTVWVNCYDV--FDASIPFGGYKMSGIGREKGIYALNNYLQVKAVV  475 (476)
T ss_pred             CCcceEEECCCCC--CCCCCCCCCCccCcCCccchHHHHHHhhheeEEe
Confidence            9999999997653  5678999999999999999999999999999875


No 33 
>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase. This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.
Probab=100.00  E-value=4.9e-91  Score=731.94  Aligned_cols=432  Identities=25%  Similarity=0.375  Sum_probs=403.1

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++++++|++|++.|++++.++|.++|++++++|++++++|++++++|+||+..+++ .|+..+++.++++++.
T Consensus        34 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~  112 (488)
T TIGR02299        34 RGGAADVDRAAKAAKEAFKRWAELKAAERKRYLHKIADLIEQHADEIAVLECLDCGQPLRQTR-QQVIRAAENFRFFADK  112 (488)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHH-HHHHHHHHHHHHHHHh
Confidence            478899999999999999999999999999999999999999999999999999999999998 5999999999999988


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      ++++..+....    ......+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.+++.++
T Consensus       113 ~~~~~~~~~~~----~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a  188 (488)
T TIGR02299       113 CEEAMDGRTYP----VDTHLNYTVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTAARLAEIAKEA  188 (488)
T ss_pred             HHHhcCCcccc----CCCceEEEEEEecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECchhchHHHHHHHHHHHHc
Confidence            87554333211    11234578899999999999999999999999999999999999999999999999999999999


Q ss_pred             -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617          162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR  238 (484)
Q Consensus       162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~  238 (484)
                       +|+|++|+++| +.+.++.|+.|+ ||.|+||||+.+|+.|++.++++++|+++|+|||||+||++   |||++.|++.
T Consensus       189 GlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~aa~~l~~~~lElGGknp~iV~~---dAdl~~A~~~  265 (488)
T TIGR02299       189 GLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADTLKRFSMELGGKSPVIVFD---DADLERALDA  265 (488)
T ss_pred             CcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCeEEEEcCCCCeEEECC---CCCHHHHHHH
Confidence             99999999998 567788999998 99999999999999999999999999999999999999999   9999999999


Q ss_pred             HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617          239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV  316 (484)
Q Consensus       239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~  316 (484)
                      +++++|. |+||.|+++++||||++++|+|+++|+++++++++|+| ++++.+||++++.+.+++.++++++.+ |++++
T Consensus       266 i~~~~~~-~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~  344 (488)
T TIGR02299       266 VVFMIFS-FNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATIL  344 (488)
T ss_pred             HHHHHHh-ccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEE
Confidence            9999999 99999999999999999999999999999999999999 888999999999999999999998864 67899


Q ss_pred             eCCCcC--------CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHH
Q 038617          317 HGGLLD--------KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQ  388 (484)
Q Consensus       317 ~gg~~~--------~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~  388 (484)
                      +||...        .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+++
T Consensus       345 ~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~  424 (488)
T TIGR02299       345 VGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTNDVGRAHR  424 (488)
T ss_pred             eCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHH
Confidence            998652        248899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617          389 IVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS  444 (484)
Q Consensus       389 ~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~  444 (484)
                      +++++++|+|+||+...  ..+.+||||+|.||+|+++|.+|+++||+.|+++++.
T Consensus       425 ~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~i~~~~  478 (488)
T TIGR02299       425 VALALEAGMIWVNSQNV--RHLPTPFGGVKASGIGREGGTYSFDFYTETKNVALAL  478 (488)
T ss_pred             HHHhCCcCeEEECCCCC--CCCCCCCCCCccCcCCccchHHHHHHHhceEEEEEec
Confidence            99999999999998764  3567899999999999999999999999999998763


No 34 
>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like. Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.
Probab=100.00  E-value=5.6e-91  Score=726.53  Aligned_cols=433  Identities=29%  Similarity=0.428  Sum_probs=402.8

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++++++|++||+.|+++|+++|.++|++++++|++++++|++++++|+||+..++.. |+..+++.+++++..
T Consensus        15 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~   93 (456)
T cd07110          15 AATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEAAW-DVDDVAGCFEYYADL   93 (456)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999999999999999999999999999975 999999999999988


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      .+++........+....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.++
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~a  173 (456)
T cd07110          94 AEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEA  173 (456)
T ss_pred             HHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcccchHHHHHHHHHHHHc
Confidence            88764221111111122345688999999999999999999999999999999999999999999999999999999999


Q ss_pred             -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617          162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR  238 (484)
Q Consensus       162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~  238 (484)
                       +|+|++|+++| +.+.++.|++|+ +|.|+||||+.+|+.|.+.++++++|+++|+|||||+||++   |+|++.|++.
T Consensus       174 GlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~~~iV~~---dadl~~aa~~  250 (456)
T cd07110         174 GLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSPIIVFD---DADLEKAVEW  250 (456)
T ss_pred             CCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCeEEEEcCCCCeeEECC---CCCHHHHHHH
Confidence             99999999999 556889999998 99999999999999999999999999999999999999999   9999999999


Q ss_pred             HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617          239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV  316 (484)
Q Consensus       239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~  316 (484)
                      +++++|. |+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+++++.++++++.. |++++
T Consensus       251 i~~~~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~v~~a~~~Ga~~~  329 (456)
T cd07110         251 AMFGCFW-NNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIARGKEEGARLL  329 (456)
T ss_pred             HHHHHHh-cCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEE
Confidence            9999999 99999999999999999999999999999999999999 889999999999999999999999864 67999


Q ss_pred             eCCCcC---CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcc
Q 038617          317 HGGLLD---KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGT  393 (484)
Q Consensus       317 ~gg~~~---~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l  393 (484)
                      +||..+   ..|+|+.|||+.+++++|.++++|+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++
T Consensus       330 ~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l  409 (456)
T cd07110         330 CGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCDRVAEAL  409 (456)
T ss_pred             eCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhC
Confidence            998763   35889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617          394 SSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM  441 (484)
Q Consensus       394 ~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~  441 (484)
                      ++|+|+||++..  ..+.+||||+|.||+|+++|++|+++||+.|+++
T Consensus       410 ~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~  455 (456)
T cd07110         410 EAGIVWINCSQP--CFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQIT  455 (456)
T ss_pred             CcceEEECCCCC--CCCCCCCCCcccccCCccchHHHHHHhcceeEEe
Confidence            999999998653  4678999999999999999999999999999875


No 35 
>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like. Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA)  to succinate.  SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731).  The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.
Probab=100.00  E-value=3.9e-91  Score=721.39  Aligned_cols=423  Identities=25%  Similarity=0.378  Sum_probs=397.8

Q ss_pred             HHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHhhc
Q 038617            8 IEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMA   87 (484)
Q Consensus         8 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~   87 (484)
                      +++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.+++++...+++..
T Consensus         1 v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~   79 (429)
T cd07100           1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEARA-EVEKCAWICRYYAENAEAFLA   79 (429)
T ss_pred             CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcC
Confidence            4789999999999999999999999999999999999999999999999999999974 999999999999999888765


Q ss_pred             CccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc-cCccc
Q 038617           88 PKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY-LDCKA  166 (484)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a-lp~g~  166 (484)
                      ......    .+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|.+++.++ +|+|+
T Consensus        80 ~~~~~~----~~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~gv  155 (429)
T cd07100          80 DEPIET----DAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGV  155 (429)
T ss_pred             CeeccC----CCceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCc
Confidence            432221    1345678999999999999999999999999999999999999999999999999999999998 99999


Q ss_pred             eeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHhhcc
Q 038617          167 IKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFA  245 (484)
Q Consensus       167 v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~~~~  245 (484)
                      +|+++|+.+.+..|++|+ +|.|.||||+.+|+.|++.+++++||+++|+|||||+||++   |||++.|++.+++++|.
T Consensus       156 v~~v~g~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~---daDl~~aa~~i~~~~~~  232 (429)
T cd07100         156 FQNLLIDSDQVEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLD---DADLDKAVKTAVKGRLQ  232 (429)
T ss_pred             EEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCcceEEecCCCCeeEECC---CCCHHHHHHHHHHHHHh
Confidence            999999667788999987 99999999999999999999999999999999999999999   99999999999999999


Q ss_pred             cCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCceeeCCCcC-
Q 038617          246 SCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIVHGGLLD-  322 (484)
Q Consensus       246 ~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~gg~~~-  322 (484)
                       |+||.|+++++||||+++||+|+++|++++.++++|+| ++++++||++++.+++++.++++++.+ |+++++||... 
T Consensus       233 -~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~  311 (429)
T cd07100         233 -NAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPD  311 (429)
T ss_pred             -ccCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC
Confidence             99999999999999999999999999999999999999 889999999999999999999999864 67899998753 


Q ss_pred             CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEEECC
Q 038617          323 KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFND  402 (484)
Q Consensus       323 ~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~  402 (484)
                      ..|+|+.|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|.|+||+
T Consensus       312 ~~g~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~  391 (429)
T cd07100         312 GPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFING  391 (429)
T ss_pred             CCCeEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcCeEEECC
Confidence            35899999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             CccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617          403 TLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM  441 (484)
Q Consensus       403 ~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~  441 (484)
                      +..  ..+.+||||+|.||+|+++|++++++||+.|+++
T Consensus       392 ~~~--~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  428 (429)
T cd07100         392 MVK--SDPRLPFGGVKRSGYGRELGRFGIREFVNIKTVW  428 (429)
T ss_pred             CCC--CCCCCCcCCccccccCCcchHHHHHHhcceeEEe
Confidence            764  3677999999999999999999999999999875


No 36 
>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like. Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate.  SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).
Probab=100.00  E-value=7.5e-91  Score=724.74  Aligned_cols=433  Identities=24%  Similarity=0.413  Sum_probs=402.4

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++++++|++|++.|+++|.++|.++|++++++|++++++|++++++|+||+..++. .|+..++..+++++..
T Consensus        14 ~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~   92 (454)
T cd07101          14 QSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHAF-EEVLDVAIVARYYARR   92 (454)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHH-HHHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999999999999999999999999999986 5999999999999999


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      ..++.++........ .....+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.+++.++
T Consensus        93 ~~~~~~~~~~~~~~~-~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~~~~~a  171 (454)
T cd07101          93 AERLLKPRRRRGAIP-VLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTALWAVELLIEA  171 (454)
T ss_pred             HHHHhCCccccccCC-CCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHc
Confidence            888876543221111 1235688999999999999999999999999999999999999999999999999999999998


Q ss_pred             -cCccceeeccC-ChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617          162 -LDCKAIKVTNG-GVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI  239 (484)
Q Consensus       162 -lp~g~v~~v~g-~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i  239 (484)
                       +|+|++|+++| +.+.+..|++| +|.|.||||+.+|+.|++.++++++|+++|+|||||+||++   |||++.|++.+
T Consensus       172 glP~gv~~~v~g~~~~~~~~l~~~-~~~V~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~---dAdl~~a~~~i  247 (454)
T cd07101         172 GLPRDLWQVVTGPGSEVGGAIVDN-ADYVMFTGSTATGRVVAERAGRRLIGCSLELGGKNPMIVLE---DADLDKAAAGA  247 (454)
T ss_pred             CcCCCcEEEEeCCcHHHHHHHHhC-CCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCceEEECC---CCCHHHHHHHH
Confidence             99999999999 56778889876 69999999999999999999999999999999999999999   99999999999


Q ss_pred             HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCceee
Q 038617          240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIVH  317 (484)
Q Consensus       240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~  317 (484)
                      ++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.++++++++++++.+ |+++++
T Consensus       248 ~~~~~~-~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~  326 (454)
T cd07101         248 VRACFS-NAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLA  326 (454)
T ss_pred             HHHHHh-cCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEe
Confidence            999999 99999999999999999999999999999999999998 889999999999999999999999864 678999


Q ss_pred             CCCcC--CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccce
Q 038617          318 GGLLD--KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS  395 (484)
Q Consensus       318 gg~~~--~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~  395 (484)
                      ||...  ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++
T Consensus       327 gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~a~~~~~~l~~  406 (454)
T cd07101         327 GGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGRRIAARLRA  406 (454)
T ss_pred             CCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCc
Confidence            98642  2478999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeEEECCCccc-cCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617          396 GSLIFNDTLVQ-QLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM  441 (484)
Q Consensus       396 g~v~iN~~~~~-~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~  441 (484)
                      |+|+||++..+ ...+.+||||+|.||+|+++|.+|+++||+.|++.
T Consensus       407 G~v~iN~~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~  453 (454)
T cd07101         407 GTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTETQTVA  453 (454)
T ss_pred             ceEEECCCCCcCcCCCCCCCCcccccccCccchHHHHHHhcceEEEe
Confidence            99999987643 24567899999999999999999999999999875


No 37 
>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative. This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.
Probab=100.00  E-value=6.7e-91  Score=732.52  Aligned_cols=434  Identities=24%  Similarity=0.365  Sum_probs=404.1

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++|++.|++|++.|+++|.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.++++++.
T Consensus        65 ~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~  143 (511)
T TIGR01237        65 KASVEQAEHALQIAKKAFEAWKKTPVRERAGILRKAAAIMERRRHELNALICLEVGKIIPEADA-EVAEAIDFCEYYARE  143 (511)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999999999999999999999999999875 999999999999999


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      ++++.+...   .....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus       144 ~~~~~~~~~---~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~a  220 (511)
T TIGR01237       144 MERLAGQGV---NLDIEGETNRYFYQPRGVAVVISPWNFPMAIAVGMTVAPIVTGNCVVLKPAETSTVIAAKIVEILIEA  220 (511)
T ss_pred             HHHhcCccc---cCCCCCceeEEEEecceeEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHh
Confidence            887754321   11122345678899999999999999999999999999999999999999999999999999999998


Q ss_pred             -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHh------cccCceeeecCCcCceEEcCCCCCCCH
Q 038617          162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAA------KHLTPVTLELGGKCPAILDTLSSPLDI  232 (484)
Q Consensus       162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~------~~~~~~~lelgG~~p~iV~~~~~daDl  232 (484)
                       +|+|++|+++| +.+.++.|++|+ +|.|.||||+.+|+.|++.++      ++++|+++|+|||||+||++   |||+
T Consensus       221 GlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~~~~~~~~lElgG~~p~iV~~---dAdl  297 (511)
T TIGR01237       221 GLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYEDAAKVQPGQKHLKRVIAEMGGKDAIIVDE---SADI  297 (511)
T ss_pred             CCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHHHhcccccccccceeEeccCCCCeEEECC---CCCH
Confidence             99999999999 567899999997 999999999999999999887      58899999999999999999   9999


Q ss_pred             HHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc
Q 038617          233 KVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV  311 (484)
Q Consensus       233 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~  311 (484)
                      +.|++.+++++|. |+||.|++++|||||++++|+|+++|.++++++++|+| ++++++||++++.+++++.++++++.+
T Consensus       298 ~~aa~~i~~~~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~  376 (511)
T TIGR01237       298 EQAVAGAVYSAFG-FTGQKCSACSRVVVLSPVYDAVVERFVEATRSLNVGPTDDPSTQVGPVIDQKSQAKIQEYIEQGKA  376 (511)
T ss_pred             HHHHHHHHHHHHh-cCCCCcccceEEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHH
Confidence            9999999999999 99999999999999999999999999999999999999 889999999999999999999999876


Q ss_pred             CCceeeCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHh
Q 038617          312 ADAIVHGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIV  390 (484)
Q Consensus       312 ~~~~~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~  390 (484)
                      ++++++||..+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+.+++
T Consensus       377 ~g~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~  456 (511)
T TIGR01237       377 EGELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAADFDEALEIANGTEYGLTGGVYSNTRDHIERAA  456 (511)
T ss_pred             CCcEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHH
Confidence            66888888653 35899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccceeeEEECCCccccCCCCCCcccCCCCCCCC-cchHHHHHHhhhccEEEEe
Q 038617          391 SGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGR-YHGHYSFETFSHEKAIMQR  443 (484)
Q Consensus       391 ~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~-~~g~~~~~~f~~~k~v~~~  443 (484)
                      +++++|+|+||+...+...+.+||||+|.||+|+ .+|.+++++||+.|+++.+
T Consensus       457 ~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~k~v~~~  510 (511)
T TIGR01237       457 AEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDSKAGGPDYLLQFMQPKTVTEN  510 (511)
T ss_pred             HhCCcceEEECCCCCCCCCCCCCCCccccccCCCcCCCHHHHHHhcceEEEEEe
Confidence            9999999999998765455678999999999995 6899999999999998765


No 38 
>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).
Probab=100.00  E-value=7.5e-91  Score=728.23  Aligned_cols=433  Identities=23%  Similarity=0.305  Sum_probs=402.7

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++++++|++|++.|++++.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.+++++..
T Consensus        31 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~  109 (478)
T cd07086          31 PASPEDVEAAVAAAREAFKEWRKVPAPRRGEIVRQIGEALRKKKEALGRLVSLEMGKILPEGLG-EVQEMIDICDYAVGL  109 (478)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence            4788999999999999999999999999999999999999999999999999999999999874 999999999999888


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      .+.+.+...   .....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus       110 ~~~~~g~~~---~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a  186 (478)
T cd07086         110 SRMLYGLTI---PSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAIAVTKILAEV  186 (478)
T ss_pred             HHHhcCccc---ccCCCCceEEEEEecceeEEEECCCCcHHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHh
Confidence            776543221   11112335678999999999999999999999999999999999999999999999999999999886


Q ss_pred             -----cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617          162 -----LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVT  235 (484)
Q Consensus       162 -----lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~a  235 (484)
                           +|+|++|+++|+.+.++.|.+|+ +|.|+||||+.+|+.|++.++++++|+++|+|||||+||++   |||++.|
T Consensus       187 l~~~glP~gvv~~v~g~~~~~~~L~~~~~vd~v~fTGs~~~g~~i~~~aa~~~~~~~lElGG~~p~iV~~---dAdl~~A  263 (478)
T cd07086         187 LEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGRRVGETVARRFGRVLLELGGNNAIIVMD---DADLDLA  263 (478)
T ss_pred             hhccCCCccceEEEecCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCcEEeecCCCCcEEEcC---CCCHHHH
Confidence                 99999999999656888889898 99999999999999999999999999999999999999999   9999999


Q ss_pred             HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CC
Q 038617          236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-AD  313 (484)
Q Consensus       236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~  313 (484)
                      ++.+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ |+
T Consensus       264 a~~i~~~~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga  342 (478)
T cd07086         264 VRAVLFAAVG-TAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGG  342 (478)
T ss_pred             HHHHHHHHHh-ccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
Confidence            9999999999 99999999999999999999999999999999999999 888999999999999999999999874 78


Q ss_pred             ceeeCCCcCC---CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHh
Q 038617          314 AIVHGGLLDK---ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIV  390 (484)
Q Consensus       314 ~~~~gg~~~~---~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~  390 (484)
                      ++++||....   +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++
T Consensus       343 ~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~deai~~~n~~~~gL~a~v~t~d~~~a~~~~  422 (478)
T cd07086         343 TVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDLREAFRWL  422 (478)
T ss_pred             EEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHH
Confidence            9999997643   5889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hc--cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617          391 SG--TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR  443 (484)
Q Consensus       391 ~~--l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~  443 (484)
                      ++  +++|+|+||+++.+ ..+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus       423 ~~~~~~~G~v~iN~~~~~-~~~~~PfgG~~~SG~G~~~g~~~~~~f~~~k~i~~~  476 (478)
T cd07086         423 GPKGSDCGIVNVNIPTSG-AEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTIN  476 (478)
T ss_pred             hcCcccceeEEECCCCCC-CCCCCCCCCcccccCCccchHHHHHHhhceEEEEEe
Confidence            99  99999999987654 457899999999999999999999999999999765


No 39 
>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.
Probab=100.00  E-value=8.7e-91  Score=728.28  Aligned_cols=433  Identities=24%  Similarity=0.319  Sum_probs=400.8

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++++++|++|++.|+++|.++|.++|++++++|++++++|++++++|+|||..+++ .|+..+++.+++++..
T Consensus        34 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~  112 (478)
T cd07085          34 LATAEEVDAAVAAAKAAFPAWSATPVLKRQQVMFKFRQLLEENLDELARLITLEHGKTLADAR-GDVLRGLEVVEFACSI  112 (478)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence            478899999999999999999999999999999999999999999999999999999999997 5999999999998876


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      .+... ++....  ...+...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus       113 ~~~~~-g~~~~~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~a  189 (478)
T cd07085         113 PHLLK-GEYLEN--VARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAMRLAELLQEA  189 (478)
T ss_pred             HHHhC-Ceeccc--CCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHHHh
Confidence            54332 221111  112335688999999999999999999999999999999999999999999999999999999998


Q ss_pred             -cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617          162 -LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI  239 (484)
Q Consensus       162 -lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i  239 (484)
                       +|+|++|+++|+.+.++.|++|+ +|.|+||||+.+|+.|.+.++++++|+++|+|||||+||++   |||++.|++.+
T Consensus       190 GlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~---dADl~~aa~~i  266 (478)
T cd07085         190 GLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAANGKRVQALGGAKNHAVVMP---DADLEQTANAL  266 (478)
T ss_pred             CCCCCcEEEEecCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcCCcEEecCCCCCceEECC---CCCHHHHHHHH
Confidence             99999999999778899999998 99999999999999999999999999999999999999999   99999999999


Q ss_pred             HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchh-cCCceee
Q 038617          240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPL-VADAIVH  317 (484)
Q Consensus       240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~-~~~~~~~  317 (484)
                      ++++|. |+||.|++++|||||++++|+|+++|+++++++++|+| ++++++||++++.+++++.++|+++. +|+++++
T Consensus       267 ~~~~~~-~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~l~  345 (478)
T cd07085         267 VGAAFG-AAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVL  345 (478)
T ss_pred             HHHHHh-cCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEe
Confidence            999999 99999999999999999999999999999999999999 88999999999999999999999986 4789999


Q ss_pred             CCCcC-----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617          318 GGLLD-----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG  392 (484)
Q Consensus       318 gg~~~-----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~  392 (484)
                      ||...     .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++
T Consensus       346 gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~  425 (478)
T cd07085         346 DGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTRSGAAARKFQRE  425 (478)
T ss_pred             CCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHh
Confidence            98641     3589999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cceeeEEECCCccccCCCCCCcccCCCCCCC--CcchHHHHHHhhhccEEEEe
Q 038617          393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIG--RYHGHYSFETFSHEKAIMQR  443 (484)
Q Consensus       393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G--~~~g~~~~~~f~~~k~v~~~  443 (484)
                      +++|+|+||++.. ...+.+||||+|.||+|  +++|.+++++||+.|+++..
T Consensus       426 l~~G~v~iN~~~~-~~~~~~PfgG~k~SG~G~~~~~g~~~~~~~~~~k~v~~~  477 (478)
T cd07085         426 VDAGMVGINVPIP-VPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQTKTVTSR  477 (478)
T ss_pred             CCcceEEEcCCCC-CCCCCCCCCCcccccCCCCcCChHHHHHHhcceEEEEEe
Confidence            9999999998753 34577999999999999  47899999999999998764


No 40 
>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B. Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate.  Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid.  The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.
Probab=100.00  E-value=9.5e-91  Score=726.18  Aligned_cols=432  Identities=22%  Similarity=0.292  Sum_probs=396.0

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++++++|++|++.|+++|.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++.+++++..
T Consensus        30 ~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~  108 (474)
T cd07130          30 QATPEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDALRKKKEALGKLVSLEMGKILPEGL-GEVQEMIDICDFAVGL  108 (474)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHh
Confidence            478899999999999999999999999999999999999999999999999999999999997 5999999999998876


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHh---
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI---  158 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l---  158 (484)
                      .+.+.+.. .  +....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++   
T Consensus       109 ~~~~~~~~-~--~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~  185 (474)
T cd07130         109 SRQLYGLT-I--PSERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTAIAVTKIVARV  185 (474)
T ss_pred             HHHhcCcc-c--cCCCCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHHHHcCCeEEeeCCccCHHHHHHHHHHHHHH
Confidence            65443221 1  11112334577899999999999999999999999999999999999999999999999888775   


Q ss_pred             -ccc-cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617          159 -PLY-LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVT  235 (484)
Q Consensus       159 -~~a-lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~a  235 (484)
                       .++ +|+|++|+++|+.+.++.|++|+ ||+|+||||+++|+.|++.++++++|+++|+|||||+||++   |||++.|
T Consensus       186 ~~~aglP~gv~~~v~g~~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~p~iV~~---dadl~~A  262 (474)
T cd07130         186 LEKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAARFGRSLLELGGNNAIIVME---DADLDLA  262 (474)
T ss_pred             HHhcCCCCCcEEEEeCChhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHhcCCCEEEEcCCCCeEEECC---CCCHHHH
Confidence             466 89999999999777899999987 99999999999999999999999999999999999999999   9999999


Q ss_pred             HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchh-cCC
Q 038617          236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPL-VAD  313 (484)
Q Consensus       236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~-~~~  313 (484)
                      ++.+++++|. |+||.|++++|||||+++||+|+++|++++.++++||| ++++++||++++.+++++.++++++. +|+
T Consensus       263 a~~i~~~~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga  341 (474)
T cd07130         263 VRAVLFAAVG-TAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGG  341 (474)
T ss_pred             HHHHHHHHHh-cCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCC
Confidence            9999999999 99999999999999999999999999999999999999 77889999999999999999999997 478


Q ss_pred             ceeeCCCc-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617          314 AIVHGGLL-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG  392 (484)
Q Consensus       314 ~~~~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~  392 (484)
                      ++++||.. +.+|+|++|||+.++++ |++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++
T Consensus       342 ~v~~gg~~~~~~g~~~~PTvl~~~~~-~~i~~eE~FGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~  420 (474)
T cd07130         342 TVLFGGKVIDGPGNYVEPTIVEGLSD-APIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTDLRNAFRWLGP  420 (474)
T ss_pred             EEEECCCcCCCCCeEEccEEEecCCC-CHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhh
Confidence            99999975 33589999999998766 99999999999999999999999999999999999999999999999999887


Q ss_pred             --cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617          393 --TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR  443 (484)
Q Consensus       393 --l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~  443 (484)
                        +++|+|+||..+. ...+.+||||+|.||+|+++|++++++|++.|++++.
T Consensus       421 ~~~~~g~v~iN~~~~-~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~~~~~  472 (474)
T cd07130         421 KGSDCGIVNVNIGTS-GAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTIN  472 (474)
T ss_pred             cCcceEEEEEcCCCC-CCCCCCCcCccccccCCccchHHHHHHHhheEEEEEe
Confidence              9999999998653 2457899999999999999999999999999998764


No 41 
>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.
Probab=100.00  E-value=9.7e-91  Score=732.11  Aligned_cols=433  Identities=25%  Similarity=0.356  Sum_probs=405.6

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|++++++.|++|++.|++++.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.+++++..
T Consensus        65 ~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~-ev~~~i~~~~~~~~~  143 (512)
T cd07124          65 KATKEEAEAAVQAARAAFPTWRRTPPEERARLLLRAAALLRRRRFELAAWMVLEVGKNWAEADA-DVAEAIDFLEYYARE  143 (512)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCcCHHHHHH-HHHHHHHHHHHHHHH
Confidence            5788999999999999999999999999999999999999999999999999999999999975 999999999999999


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      ++++.. .....   ..+....++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus       144 ~~~~~~-~~~~~---~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~a  219 (512)
T cd07124         144 MLRLRG-FPVEM---VPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEA  219 (512)
T ss_pred             HHHhcC-ccccC---CCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHh
Confidence            887732 21111   12346688999999999999999999999999999999999999999999999999999999998


Q ss_pred             -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhc------ccCceeeecCCcCceEEcCCCCCCCH
Q 038617          162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAK------HLTPVTLELGGKCPAILDTLSSPLDI  232 (484)
Q Consensus       162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~------~~~~~~lelgG~~p~iV~~~~~daDl  232 (484)
                       +|+|++|+++| +.+.+..|++|+ +|.|+||||+.+|+.|.+.+++      +++|+++|+|||||+||++   |||+
T Consensus       220 GlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~l~~~~lElgGk~p~iV~~---daDl  296 (512)
T cd07124         220 GLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGGKNAIIVDE---DADL  296 (512)
T ss_pred             CcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHHHhcccccccCCCcEEEECCCCCeEEECC---CCCH
Confidence             99999999999 557889999997 9999999999999999999886      6899999999999999999   9999


Q ss_pred             HHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc
Q 038617          233 KVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV  311 (484)
Q Consensus       233 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~  311 (484)
                      +.|++.+++++|. |+||.|+++++||||++++|+|+++|++++.++++|+| ++++++||++++.+++++.++|+++.+
T Consensus       297 ~~Aa~~i~~~~f~-~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~  375 (512)
T cd07124         297 DEAAEGIVRSAFG-FQGQKCSACSRVIVHESVYDEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKS  375 (512)
T ss_pred             HHHHHHHHHHHHh-hCCCccccceEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHh
Confidence            9999999999999 99999999999999999999999999999999999999 888999999999999999999999877


Q ss_pred             CCceeeCCCcCC---CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHH
Q 038617          312 ADAIVHGGLLDK---ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQ  388 (484)
Q Consensus       312 ~~~~~~gg~~~~---~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~  388 (484)
                      ++++++||..+.   +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+.+
T Consensus       376 g~~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~  455 (512)
T cd07124         376 EGRLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLER  455 (512)
T ss_pred             CCEEEecCccCCCCCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHH
Confidence            889999997643   68999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhccceeeEEECCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEe
Q 038617          389 IVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIG-RYHGHYSFETFSHEKAIMQR  443 (484)
Q Consensus       389 ~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~  443 (484)
                      +++++++|+|+||+...+...+.+||||+|.||+| +++|.+|+++||+.|+++++
T Consensus       456 ~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~~~~~t~~k~v~~~  511 (512)
T cd07124         456 ARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAGGPDYLLQFMQPKTVTEN  511 (512)
T ss_pred             HHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCcHHHHHHhccEEEEEEe
Confidence            99999999999998876555577999999999999 78899999999999998764


No 42 
>cd07099 ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.
Probab=100.00  E-value=1.3e-90  Score=724.01  Aligned_cols=435  Identities=29%  Similarity=0.445  Sum_probs=406.9

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++++++|++|++.|++++.++|.++|++++++|++++++|++++++|+||+..++. .|+..+++.++++++.
T Consensus        14 ~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~-~ev~~~~~~l~~~~~~   92 (453)
T cd07099          14 VTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRADAG-LEVLLALEAIDWAARN   92 (453)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence            478899999999999999999999999999999999999999999999999999999999776 4999999999999999


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      +.++.+.+.........+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|++++.++
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~~p~~~~~l~~~l~~a  172 (453)
T cd07099          93 APRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGELLAEAWAAA  172 (453)
T ss_pred             HHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHc
Confidence            88876543222111113446688999999999999999999999999999999999999999999999999999999999


Q ss_pred             -cCccceeeccCChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHH
Q 038617          162 -LDCKAIKVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRII  240 (484)
Q Consensus       162 -lp~g~v~~v~g~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~  240 (484)
                       +|+|++|+++|+.+.+..|++|++|.|+||||+++|+.|.+.++++++|+++|+|||||+||++   |||++.|++.++
T Consensus       173 g~P~g~~~vv~g~~~~~~~l~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~---dadl~~a~~~i~  249 (453)
T cd07099         173 GPPQGVLQVVTGDGATGAALIDAGVDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMIVLA---DADLERAAAAAV  249 (453)
T ss_pred             CCCCCeEEEEeCCchHHHHHhcCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEECC---CCCHHHHHHHHH
Confidence             9999999999966888999988899999999999999999999999999999999999999999   999999999999


Q ss_pred             HhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCceeeC
Q 038617          241 GGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIVHG  318 (484)
Q Consensus       241 ~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~g  318 (484)
                      +++|. |+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ |+++++|
T Consensus       250 ~~~~~-~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~g  328 (453)
T cd07099         250 WGAMV-NAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDAVAKGAKALTG  328 (453)
T ss_pred             HHHHh-cCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEeC
Confidence            99999 99999999999999999999999999999999999998 889999999999999999999999864 6789999


Q ss_pred             CCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceee
Q 038617          319 GLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGS  397 (484)
Q Consensus       319 g~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~  397 (484)
                      |... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.
T Consensus       329 g~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~  408 (453)
T cd07099         329 GARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAEAIARRLEAGA  408 (453)
T ss_pred             CCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeee
Confidence            8764 468999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617          398 LIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM  441 (484)
Q Consensus       398 v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~  441 (484)
                      |+||+.+.+...+.+||||+|.||+|+++|.+++++||+.|+++
T Consensus       409 v~iN~~~~~~~~~~~PfGG~~~SG~g~~~g~~~~~~~t~~k~v~  452 (453)
T cd07099         409 VSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIA  452 (453)
T ss_pred             EEECCCCCCCCCCCCCCCCcccccCCccChHHHHHHhcceEEEe
Confidence            99999876666789999999999999999999999999999975


No 43 
>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.
Probab=100.00  E-value=1.3e-90  Score=726.64  Aligned_cols=430  Identities=26%  Similarity=0.341  Sum_probs=396.6

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++|+++|++||+.|+++|.++|.++|++++++|++++++|+++++.|+||+..++...|+..+++.++++++.
T Consensus        34 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~  113 (479)
T cd07116          34 RSTAEDIELALDAAHAAKEAWGKTSVAERANILNKIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGC  113 (479)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            47889999999999999999999999999999999999999999999999999999999998766999999999999887


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      .+......    .....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus       114 ~~~~~~~~----~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~a  189 (479)
T cd07116         114 IRAQEGSI----SEIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILVLMELIGDL  189 (479)
T ss_pred             HHHcCCee----ecCCCCceEEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHH
Confidence            76542211    11112334678999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCC------CCHH
Q 038617          162 LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSP------LDIK  233 (484)
Q Consensus       162 lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~d------aDl~  233 (484)
                      +|+|++|+++| +.+.+..|++|+ ||.|+||||+.+|+.|++.++.+++|+++|+|||||+||++   |      ||++
T Consensus       190 lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~p~~lElGGk~p~iV~~---da~~~~~adl~  266 (479)
T cd07116         190 LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASENIIPVTLELGGKSPNIFFA---DVMDADDAFFD  266 (479)
T ss_pred             CCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHcCCCeEEEECCCCCeEEEec---CcccccccCHH
Confidence            99999999999 667899999997 99999999999999999999999999999999999999999   7      7999


Q ss_pred             HHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-
Q 038617          234 VTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-  311 (484)
Q Consensus       234 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-  311 (484)
                      .|++.++++ ++ |+||.|++++|||||+++||+|+++|.++++++++|+| ++++.+||++++.+++++.++++++.+ 
T Consensus       267 ~A~~~i~~~-~~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~  344 (479)
T cd07116         267 KALEGFVMF-AL-NQGEVCTCPSRALIQESIYDRFMERALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEE  344 (479)
T ss_pred             HHHHHHHHH-Hh-cCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHC
Confidence            999999986 57 89999999999999999999999999999999999999 888999999999999999999999874 


Q ss_pred             CCceeeCCCcC-----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHH
Q 038617          312 ADAIVHGGLLD-----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFK  386 (484)
Q Consensus       312 ~~~~~~gg~~~-----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~  386 (484)
                      |+++++||...     .+|+|+.|||+.+++ +|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++
T Consensus       345 Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gLsa~v~t~d~~~a  423 (479)
T cd07116         345 GAEVLTGGERNELGGLLGGGYYVPTTFKGGN-KMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGAGVWTRDGNTA  423 (479)
T ss_pred             CCEEEeCCCcCCCCCCCCCeeecCeEEccCC-CChhhhcCCcCceEEEEEeCCHHHHHHHHhCCcccceEEEEcCCHHHH
Confidence            67899998653     258899999999874 999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617          387 KQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR  443 (484)
Q Consensus       387 ~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~  443 (484)
                      +++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+++++|++.|+++++
T Consensus       424 ~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~  478 (479)
T cd07116         424 YRMGRGIQAGRVWTNCYHL--YPAHAAFGGYKQSGIGRENHKMMLDHYQQTKNLLVS  478 (479)
T ss_pred             HHHHHhcCcCeEEECCCCC--CCCCCCcCCCccCcCCccChHHHHHHhhceEEEEEe
Confidence            9999999999999997654  457889999999999999999999999999998763


No 44 
>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.
Probab=100.00  E-value=1.4e-90  Score=722.75  Aligned_cols=435  Identities=27%  Similarity=0.373  Sum_probs=404.6

Q ss_pred             CCCCHHHHHHHHHHHHHHhHhcC-CCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617            1 MAAAMGEIEDKLAELRQTFRSGI-TKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL   79 (484)
Q Consensus         1 ~~~~~~~v~~av~~A~~A~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~   79 (484)
                      +.++.+|+++++++|++|++.|+ ++|.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.+++++
T Consensus        14 ~~~~~~~v~~av~~A~~a~~~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~i~~~~~~~   93 (459)
T cd07089          14 PDAGAADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTARAMQVDGPIGHLRYFA   93 (459)
T ss_pred             eCCCHHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence            35788999999999999999999 99999999999999999999999999999999999998776569999999999999


Q ss_pred             HHHHHhhcCccccCc-cccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHh
Q 038617           80 SCLDKWMAPKKRRLP-LLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI  158 (484)
Q Consensus        80 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l  158 (484)
                      +.++++......... ....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.++|
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~~  173 (459)
T cd07089          94 DLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEII  173 (459)
T ss_pred             HHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHH
Confidence            998887554322111 0112446689999999999999999999999999999999999999999999999999999999


Q ss_pred             ccc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617          159 PLY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVT  235 (484)
Q Consensus       159 ~~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~a  235 (484)
                      .++ +|+|++|+++| +.+.+..|++|+ +|.|.||||+.+|+.|++.+++++||+++|+|||||+||++   |||++.|
T Consensus       174 ~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa~~~~~~~lelgG~n~~iV~~---dadl~~a  250 (459)
T cd07089         174 AETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLELGGKSANIVLD---DADLAAA  250 (459)
T ss_pred             HHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCeeEECC---CCCHHHH
Confidence            998 99999999999 455789999997 99999999999999999999999999999999999999999   9999999


Q ss_pred             HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchh-cCC
Q 038617          236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPL-VAD  313 (484)
Q Consensus       236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~-~~~  313 (484)
                      ++.+++++|. |+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+.+++.++++++. +|+
T Consensus       251 a~~i~~~~~~-~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v~~~i~~a~~~Ga  329 (459)
T cd07089         251 APAAVGVCMH-NAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRVEGYIARGRDEGA  329 (459)
T ss_pred             HHHHHHHHHH-hcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCC
Confidence            9999999999 99999999999999999999999999999999999999 88899999999999999999999886 478


Q ss_pred             ceeeCCCcCC---CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHh
Q 038617          314 AIVHGGLLDK---ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIV  390 (484)
Q Consensus       314 ~~~~gg~~~~---~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~  390 (484)
                      ++++||..+.   +|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+++++
T Consensus       330 ~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~  409 (459)
T cd07089         330 RLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDRAYRVA  409 (459)
T ss_pred             EEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHH
Confidence            9999987543   6899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617          391 SGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM  441 (484)
Q Consensus       391 ~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~  441 (484)
                      +++++|+|+||+...  ..+.+||||+|.||+|+++|.+++++||+.|+++
T Consensus       410 ~~~~~G~v~iN~~~~--~~~~~PfgG~k~SG~G~~~g~~~l~~ft~~k~v~  458 (459)
T cd07089         410 RRIRTGSVGINGGGG--YGPDAPFGGYKQSGLGRENGIEGLEEFLETKSIA  458 (459)
T ss_pred             HhcCcCeEEECCCCC--CCCCCCcCCcccccCCCCchHHHHHHhhceeEEe
Confidence            999999999998763  4677899999999999999999999999999875


No 45 
>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like. Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.
Probab=100.00  E-value=1.4e-90  Score=721.58  Aligned_cols=427  Identities=28%  Similarity=0.400  Sum_probs=399.0

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++++++|++||+.|++++.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.++++++.
T Consensus        15 ~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~   93 (446)
T cd07106          15 VASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEAQF-EVGGAVAWLRYTASL   93 (446)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHhh
Confidence            4788999999999999999999999999999999999999999999999999999999999875 999999999888765


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      ..   .....   ....+...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus        94 ~~---~~~~~---~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~~~~~  167 (446)
T cd07106          94 DL---PDEVI---EDDDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEV  167 (446)
T ss_pred             hh---cCccc---cCCCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHh
Confidence            42   11111   1112445688999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHH
Q 038617          162 LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRII  240 (484)
Q Consensus       162 lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~  240 (484)
                      +|+|++|+++|+.+.++.|++|+ +|.|+||||+.+|+.|.+.++++++|+++|+|||||+||++   |||++.|++.++
T Consensus       168 lP~g~~~~v~g~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~~~~lElGG~~p~iV~~---dADl~~aa~~iv  244 (446)
T cd07106         168 LPPGVLNVVSGGDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGNDAAIVLP---DVDIDAVAPKLF  244 (446)
T ss_pred             CCcCeEEEeeCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeeEEecCCCCeeEECC---CCCHHHHHHHHH
Confidence            99999999999777889999998 99999999999999999999999999999999999999999   999999999999


Q ss_pred             HhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchh-cCCceeeC
Q 038617          241 GGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPL-VADAIVHG  318 (484)
Q Consensus       241 ~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~-~~~~~~~g  318 (484)
                      +++|. |+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+++++.++++++. +++++++|
T Consensus       245 ~~~~~-~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~g  323 (446)
T cd07106         245 WGAFI-NSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDAKAKGAKVLAG  323 (446)
T ss_pred             HHHHH-hcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeC
Confidence            99999 99999999999999999999999999999999999999 88999999999999999999999886 47899999


Q ss_pred             CCcCC-CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceee
Q 038617          319 GLLDK-ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGS  397 (484)
Q Consensus       319 g~~~~-~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~  397 (484)
                      |...+ .|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+
T Consensus       324 g~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~~~~G~  403 (446)
T cd07106         324 GEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVARRLEAGT  403 (446)
T ss_pred             CCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCccE
Confidence            97643 58899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617          398 LIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM  441 (484)
Q Consensus       398 v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~  441 (484)
                      |+||++..  ..+.+||||+|.||+|+++|.+|+++||+.|+|.
T Consensus       404 v~iN~~~~--~~~~~pfGG~~~SG~G~~~g~~~~~~~t~~k~v~  445 (446)
T cd07106         404 VWINTHGA--LDPDAPFGGHKQSGIGVEFGIEGLKEYTQTQVIN  445 (446)
T ss_pred             EEECCCCC--CCCCCCCCCccccccCccchHHHHHHhhceeEEe
Confidence            99998774  4678999999999999999999999999999875


No 46 
>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=100.00  E-value=1.8e-90  Score=721.16  Aligned_cols=432  Identities=25%  Similarity=0.352  Sum_probs=399.3

Q ss_pred             CCCHHHHHHHHHHHHHHhHh-cCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRS-GITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALS   80 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~   80 (484)
                      .++.+|+++++++|++||+. |+++|.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.++++++
T Consensus        17 ~~~~~~v~~av~~A~~a~~~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~i~~~~~~~~   95 (455)
T cd07148          17 TVDWAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLVDAKV-EVTRAIDGVELAAD   95 (455)
T ss_pred             CCCHHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHH
Confidence            57889999999999999997 56799999999999999999999999999999999999999975 99999999999999


Q ss_pred             HHHHhhcCccccCc-cccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617           81 CLDKWMAPKKRRLP-LLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP  159 (484)
Q Consensus        81 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~  159 (484)
                      .++++.+....... ....+...+++++|+|||++|+|||||++++++++++||++||+||+|||+.+|.++..+++++.
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~  175 (455)
T cd07148          96 ELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLH  175 (455)
T ss_pred             HHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEeeCCCcccHHHHHHHHHHH
Confidence            98877543211110 01123356789999999999999999999999999999999999999999999999999999999


Q ss_pred             cc-cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHH
Q 038617          160 LY-LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVK  237 (484)
Q Consensus       160 ~a-lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~  237 (484)
                      ++ +|+|++|+++|+.+.++.|+.|+ +|.|.||||+++|+.|++.++. .+|+++|+|||||+||++   |||++.|++
T Consensus       176 ~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~-~~~~~lElGG~~p~iV~~---dADl~~aa~  251 (455)
T cd07148         176 EAGLPEGWCQAVPCENAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAP-GTRCALEHGGAAPVIVDR---SADLDAMIP  251 (455)
T ss_pred             HcCCCcCcEEEEeCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhc-CCcEEEecCCCCceEECC---CCCHHHHHH
Confidence            98 99999999999777889999987 9999999999999999998876 599999999999999999   999999999


Q ss_pred             HHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCce
Q 038617          238 RIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAI  315 (484)
Q Consensus       238 ~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~  315 (484)
                      .+++++|. |+||.|++++|||||++++|+|+++|++++.++++|+| ++++++||++++.+++++.++++++.+ |+++
T Consensus       252 ~i~~~~f~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v  330 (455)
T cd07148         252 PLVKGGFY-HAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARL  330 (455)
T ss_pred             HHHHHHHh-cCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHhCCCEE
Confidence            99999999 99999999999999999999999999999999999999 889999999999999999999999874 6789


Q ss_pred             eeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccce
Q 038617          316 VHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS  395 (484)
Q Consensus       316 ~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~  395 (484)
                      ++||... .++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+.++++++++
T Consensus       331 l~gg~~~-~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~~~~  409 (455)
T cd07148         331 LCGGKRL-SDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVALKAVRRLDA  409 (455)
T ss_pred             EeCCccC-CCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHHcCc
Confidence            9998764 478999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617          396 GSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM  441 (484)
Q Consensus       396 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~  441 (484)
                      |+|+||+++. ...+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus       410 g~v~iN~~~~-~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~  454 (455)
T cd07148         410 TAVMVNDHTA-FRVDWMPFAGRRQSGYGTGGIPYTMHDMTQEKMAV  454 (455)
T ss_pred             CeEEECCCCC-CCCCCCCCCcchhcccCCCchHHHHHHhhceeEEe
Confidence            9999998763 24457899999999999999999999999999885


No 47 
>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like. Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.
Probab=100.00  E-value=1.7e-90  Score=719.56  Aligned_cols=428  Identities=25%  Similarity=0.355  Sum_probs=399.0

Q ss_pred             CCCHHHHHHHHHHHHHHhHh--cCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRS--GITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL   79 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~   79 (484)
                      .++.+|+++|++.|++||+.  |+. ++++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.+++++
T Consensus        15 ~~~~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-Ev~~~i~~l~~~~   92 (455)
T cd07120          15 DGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGEARF-EISGAISELRYYA   92 (455)
T ss_pred             CCCHHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHH
Confidence            57899999999999999985  998 9999999999999999999999999999999999999975 9999999999999


Q ss_pred             HHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617           80 SCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP  159 (484)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~  159 (484)
                      ...++..+...   . ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.
T Consensus        93 ~~~~~~~g~~~---~-~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~~~~~l~~~~~  168 (455)
T cd07120          93 GLARTEAGRMI---E-PEPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILA  168 (455)
T ss_pred             HHHHHhcCccc---c-cCCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChHHHHHHHHHHH
Confidence            88876543221   1 1123456889999999999999999999999999999999999999999999999999999999


Q ss_pred             c-c-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617          160 L-Y-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVT  235 (484)
Q Consensus       160 ~-a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~a  235 (484)
                      + + +|+|++|+++| +.+.++.|++|+ +|.|.||||+.+|+.|++.+++++||+++|+|||||+||++   |+|+|.|
T Consensus       169 ~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGG~~~~IV~~---daDl~~a  245 (455)
T cd07120         169 EIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLELGGKTPCIVFD---DADLDAA  245 (455)
T ss_pred             HhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeeEECC---CCCHHHH
Confidence            9 5 99999999998 567889999997 99999999999999999999999999999999999999999   9999999


Q ss_pred             HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CC
Q 038617          236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-AD  313 (484)
Q Consensus       236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~  313 (484)
                      ++.+++++|. |+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.++++++++++++.+ ++
T Consensus       246 a~~i~~~~~~-~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga  324 (455)
T cd07120         246 LPKLERALTI-FAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVERAIAAGA  324 (455)
T ss_pred             HHHHHHHHHH-hCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHHHHHHHHHHHHCCC
Confidence            9999999999 99999999999999999999999999999999999999 889999999999999999999999874 67


Q ss_pred             ceeeCCCc-C---CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 038617          314 AIVHGGLL-D---KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQI  389 (484)
Q Consensus       314 ~~~~gg~~-~---~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~  389 (484)
                      ++++||.. +   .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++
T Consensus       325 ~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLs~~ift~d~~~a~~~  404 (455)
T cd07120         325 EVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDLARAMRV  404 (455)
T ss_pred             EEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHH
Confidence            88887753 2   2589999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617          390 VSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM  441 (484)
Q Consensus       390 ~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~  441 (484)
                      ++++++|+|+||++..  ..+.+||||+|.||+|+++|++++++||+.|+++
T Consensus       405 ~~~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~l~~ft~~k~v~  454 (455)
T cd07120         405 ARAIRAGTVWINDWNK--LFAEAEEGGYRQSGLGRLHGVAALEDFIEYKHIY  454 (455)
T ss_pred             HHhcCcceEEECCCCC--CCCCCCcCCccccccCccchHHHHHHHhceeEEe
Confidence            9999999999998765  3567899999999999999999999999999985


No 48 
>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like. NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.
Probab=100.00  E-value=2e-90  Score=723.22  Aligned_cols=431  Identities=28%  Similarity=0.421  Sum_probs=399.9

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++++++|++|++.|++++.++|.++|++++++|++++++|++++++|+||+..++.. |+..+++.+++++..
T Consensus        28 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-Ev~~~~~~~~~~~~~  106 (465)
T cd07151          28 AASKEDVDEAYRAAAAAQKEWAATLPQERAEILEKAAQILEERRDEIVEWLIRESGSTRIKANI-EWGAAMAITREAATF  106 (465)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999999999999999999999999999999999875 999999999999877


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHH-HHHHHHhcc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECA-SFLAETIPL  160 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~-~~l~~~l~~  160 (484)
                      ...+.+.. .  +....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++ ..+.+++.+
T Consensus       107 ~~~~~~~~-~--~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~  183 (465)
T cd07151         107 PLRMEGRI-L--PSDVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGGLLLAKIFEE  183 (465)
T ss_pred             HHHhcCcc-c--cCCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCCCCcHhHHHHHHHHHHH
Confidence            65542211 1  1111234567889999999999999999999999999999999999999999999996 689999999


Q ss_pred             c-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHH
Q 038617          161 Y-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVK  237 (484)
Q Consensus       161 a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~  237 (484)
                      + +|+|++|+++| +.+.+..|++|+ +|.|.||||+.+|+.|++.++++++|+++|+|||||+||++   |||++.|++
T Consensus       184 aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~p~iV~~---daDl~~Aa~  260 (465)
T cd07151         184 AGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLKKVALELGGNNPFVVLE---DADIDAAVN  260 (465)
T ss_pred             cCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECC---CCCHHHHHH
Confidence            8 99999999998 567889999998 99999999999999999999999999999999999999999   999999999


Q ss_pred             HHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCce
Q 038617          238 RIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAI  315 (484)
Q Consensus       238 ~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~  315 (484)
                      .+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++.+||++++.+++++.++++++.+ |+++
T Consensus       261 ~i~~~~f~-~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~ga~v  339 (465)
T cd07151         261 AAVFGKFL-HQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATL  339 (465)
T ss_pred             HHHHHHHh-cCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEE
Confidence            99999999 99999999999999999999999999999999999999 788999999999999999999998864 6789


Q ss_pred             eeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccce
Q 038617          316 VHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS  395 (484)
Q Consensus       316 ~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~  395 (484)
                      ++||..  .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++
T Consensus       340 l~gg~~--~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~~  417 (465)
T cd07151         340 LVGGEA--EGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQFARRIDA  417 (465)
T ss_pred             EecCCc--CCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhCCc
Confidence            999864  588999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617          396 GSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR  443 (484)
Q Consensus       396 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~  443 (484)
                      |+|+||+.+.+ ..+.+||||+|.||+|+++|++++++|++.|++++.
T Consensus       418 G~v~iN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~~~~~  464 (465)
T cd07151         418 GMTHINDQPVN-DEPHVPFGGEKNSGLGRFNGEWALEEFTTDKWISVQ  464 (465)
T ss_pred             CeEEECCCCCC-CCCCCCCCCcccccCCcCChHHHHHHhhceEEEEec
Confidence            99999987754 356799999999999999999999999999998764


No 49 
>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like. NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.
Probab=100.00  E-value=2e-90  Score=725.57  Aligned_cols=431  Identities=28%  Similarity=0.374  Sum_probs=401.3

Q ss_pred             CCCHHHHHHHHHHHHHHhH---hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFR---SGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYA   78 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~   78 (484)
                      .++.+++++++++|++|++   .|+++|.++|.++|++++++|+++.++|++++++|+|||..++...|+..+++.++++
T Consensus        40 ~~~~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~  119 (481)
T cd07141          40 EGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYY  119 (481)
T ss_pred             CCCHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHH
Confidence            4788999999999999998   6999999999999999999999999999999999999999777656999999999999


Q ss_pred             HHHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHh
Q 038617           79 LSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI  158 (484)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l  158 (484)
                      +...+++.+...   +. ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++
T Consensus       120 a~~~~~~~g~~~---~~-~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l  195 (481)
T cd07141         120 AGWADKIHGKTI---PM-DGDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTPLTALYLASLI  195 (481)
T ss_pred             HHHHHHhcCcee---cC-CCCceEEEEEeceeEEEEEccChhHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHH
Confidence            988877644221   11 12234678999999999999999999999999999999999999999999999999999999


Q ss_pred             ccc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhc-ccCceeeecCCcCceEEcCCCCCCCHHH
Q 038617          159 PLY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAK-HLTPVTLELGGKCPAILDTLSSPLDIKV  234 (484)
Q Consensus       159 ~~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~-~~~~~~lelgG~~p~iV~~~~~daDl~~  234 (484)
                      .++ +|+|++|+++| +.+.++.|+.|+ +|.|+||||+.+|+.|++.++. ++||+++|+|||||+||++   |||++.
T Consensus       196 ~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~~lElGG~~~~iV~~---dADl~~  272 (481)
T cd07141         196 KEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQAAGKSNLKRVTLELGGKSPNIVFA---DADLDY  272 (481)
T ss_pred             HHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhhhcCceEEEEcCCCCeEEECC---CCCHHH
Confidence            998 99999999999 557788999997 9999999999999999998886 8999999999999999999   999999


Q ss_pred             HHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-C
Q 038617          235 TVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-A  312 (484)
Q Consensus       235 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~  312 (484)
                      |++.+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ |
T Consensus       273 A~~~i~~~~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~G  351 (481)
T cd07141         273 AVEQAHEALFF-NMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEG  351 (481)
T ss_pred             HHHHHHHHHHh-cCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHCC
Confidence            99999999999 99999999999999999999999999999999999999 888999999999999999999999864 6


Q ss_pred             CceeeCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh
Q 038617          313 DAIVHGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS  391 (484)
Q Consensus       313 ~~~~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~  391 (484)
                      +++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++
T Consensus       352 a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft~d~~~a~~~~~  431 (481)
T cd07141         352 AKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTKDIDKAITFSN  431 (481)
T ss_pred             CEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHH
Confidence            7999999763 468999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEE
Q 038617          392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQ  442 (484)
Q Consensus       392 ~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~  442 (484)
                      ++++|+|+||++..  ..+.+||||+|.||+|+++|.+++++||+.|++++
T Consensus       432 ~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~  480 (481)
T cd07141         432 ALRAGTVWVNCYNV--VSPQAPFGGYKMSGNGRELGEYGLQEYTEVKTVTI  480 (481)
T ss_pred             hcCcCeEEECCCCC--CCCCCCCCCcccCcCCccchHHHHHHHhheEEEEE
Confidence            99999999998653  56789999999999999999999999999999865


No 50 
>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like. NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.
Probab=100.00  E-value=2.3e-90  Score=721.85  Aligned_cols=432  Identities=29%  Similarity=0.404  Sum_probs=400.1

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++++++|++|++.|+++|.++|.++|++++++|++++++|++++++|+|||..+++. |+..+++.++++++.
T Consensus        17 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~   95 (456)
T cd07145          17 SLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQSRV-EVERTIRLFKLAAEE   95 (456)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence            4788999999999999999999999999999999999999999999999999999999999985 999999999999987


Q ss_pred             HHHhhcCccccCcc--ccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617           82 LDKWMAPKKRRLPL--LFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP  159 (484)
Q Consensus        82 ~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~  159 (484)
                      .+.+. ++......  ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.
T Consensus        96 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~  174 (456)
T cd07145          96 AKVLR-GETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILE  174 (456)
T ss_pred             HHHhc-CccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHH
Confidence            76432 22111110  0112345678999999999999999999999999999999999999999999999999999999


Q ss_pred             cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHH
Q 038617          160 LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTV  236 (484)
Q Consensus       160 ~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa  236 (484)
                      ++ +|+|++|+++| +.+.++.|++|+ +|.|.||||+.+|+.|++.++++++|+++|+|||||+||++   |||++.|+
T Consensus       175 ~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~v~lElgG~n~~iV~~---dAdl~~aa  251 (456)
T cd07145         175 EAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALELGGSDPMIVLK---DADLERAV  251 (456)
T ss_pred             HcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCceEEecCCCCeeEECC---CCCHHHHH
Confidence            98 99999999999 567889999997 99999999999999999999999999999999999999999   99999999


Q ss_pred             HHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCc
Q 038617          237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADA  314 (484)
Q Consensus       237 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~  314 (484)
                      +.+++++|. |+||.|+++++||||++++|+|+++|++++.++++|+| ++++++||++++.+++++.++++++.. +++
T Consensus       252 ~~i~~~~f~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~  330 (456)
T cd07145         252 SIAVRGRFE-NAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERMENLVNDAVEKGGK  330 (456)
T ss_pred             HHHHHHHHh-ccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCE
Confidence            999999999 99999999999999999999999999999999999999 889999999999999999999999864 678


Q ss_pred             eeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccc
Q 038617          315 IVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTS  394 (484)
Q Consensus       315 ~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~  394 (484)
                      +++||..+. |+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+.+++++++
T Consensus       331 vl~gg~~~~-g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~~~  409 (456)
T cd07145         331 ILYGGKRDE-GSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALKVARELE  409 (456)
T ss_pred             EEeCCCCCC-CeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCC
Confidence            999987643 8999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617          395 SGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM  441 (484)
Q Consensus       395 ~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~  441 (484)
                      +|+|+||+.+.. ..+.+||||+|.||+|+++|++|+++|++.|+|.
T Consensus       410 ~g~v~vN~~~~~-~~~~~pfgG~~~SG~G~~~g~~~l~~f~~~k~v~  455 (456)
T cd07145         410 AGGVVINDSTRF-RWDNLPFGGFKKSGIGREGVRYTMLEMTEEKTIV  455 (456)
T ss_pred             cceEEECCCCCC-CCCCCCCCCcccccCCcCchHHHHHHhhceeEEe
Confidence            999999987642 3468999999999999999999999999999885


No 51 
>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily.  Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans,  is a mitochondrial  homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.
Probab=100.00  E-value=4.1e-90  Score=726.98  Aligned_cols=434  Identities=20%  Similarity=0.285  Sum_probs=399.4

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHh-cHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQD-NEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALS   80 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~-~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~   80 (484)
                      .++.+|+++|+++|++||+.|+++|..+|.++|++++++|++ ++++|++++++|+||+..++...|+...++.+++++.
T Consensus        65 ~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~  144 (522)
T cd07123          65 YADAALVEKAIEAALEARKEWARMPFEDRAAIFLKAADLLSGKYRYELNAATMLGQGKNVWQAEIDAACELIDFLRFNVK  144 (522)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhCHHHHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999999996 8999999999999999999876688889999999998


Q ss_pred             HHHHhhcCccccCccccCCCcceEEeecc-eEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617           81 CLDKWMAPKKRRLPLLFFPASGEVVSEPF-GVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP  159 (484)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~  159 (484)
                      ...++.......   ...+...+++++|+ |||++|+|||||+.+..+++++|| +||+||+|||+.+|.++..|++++.
T Consensus       145 ~~~~~~~~~~~~---~~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~~~~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~  220 (522)
T cd07123         145 YAEELYAQQPLS---SPAGVWNRLEYRPLEGFVYAVSPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAVLSNYLVYKILE  220 (522)
T ss_pred             HHHHhcCccccC---CCCCceeEEEEecCCceEEEECCcccHHHHHHHHHHHHH-hCCEEEEECCCCCCHHHHHHHHHHH
Confidence            877764432211   11234567899998 999999999999999999999999 6999999999999999999999999


Q ss_pred             cc-cCccceeeccCC-hhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccC------ceeeecCCcCceEEcCCCCCC
Q 038617          160 LY-LDCKAIKVTNGG-VDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLT------PVTLELGGKCPAILDTLSSPL  230 (484)
Q Consensus       160 ~a-lp~g~v~~v~g~-~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~------~~~lelgG~~p~iV~~~~~da  230 (484)
                      ++ +|+|++|+++|+ .+.++.|+.|+ ||.|+||||+++|+.|++.++++++      |+++|+|||||+||++   ||
T Consensus       221 ~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i~~~aa~~l~~~~~~~~v~lElGGkn~~IV~~---dA  297 (522)
T cd07123         221 EAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQIGENLDRYRTYPRIVGETGGKNFHLVHP---SA  297 (522)
T ss_pred             HcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhhcccccccCCEEEECCCCCeeEECC---CC
Confidence            99 999999999994 56889999997 9999999999999999999998887      8999999999999999   99


Q ss_pred             CHHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhch
Q 038617          231 DIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDP  309 (484)
Q Consensus       231 Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a  309 (484)
                      |+|.|++.+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++++++
T Consensus       298 dl~~Aa~~i~~~~f~-~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a  376 (522)
T cd07123         298 DVDSLVTATVRGAFE-YQGQKCSAASRAYVPESLWPEVKERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHA  376 (522)
T ss_pred             CHHHHHHHHHHHHHh-cCCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence            999999999999999 99999999999999999999999999999999999999 8889999999999999999999998


Q ss_pred             hc--CCceeeCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCC--HHHHHHHHhcCC-CCceEEEecCCH
Q 038617          310 LV--ADAIVHGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNN--IQESIEFINSRP-KPLAIYAFTKDE  383 (484)
Q Consensus       310 ~~--~~~~~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~--~~eai~~~n~~~-~gl~a~v~t~d~  383 (484)
                      .+  |+++++||..+ .+|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++|++. |||++||||+|.
T Consensus       377 ~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~  456 (522)
T cd07123         377 KSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTVYVYPDSDFEETLELVDTTSPYALTGAIFAQDR  456 (522)
T ss_pred             HHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhhcCCCCCeEEEEEeCCCCHHHHHHHHhCCCCcCceEEEEeCCH
Confidence            64  67899998654 3589999999999999999999999999999999994  799999999985 999999999999


Q ss_pred             HHHHHHhhcc--ceeeEEECCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEe
Q 038617          384 TFKKQIVSGT--SSGSLIFNDTLVQQLCDVLPFGGVGQSGIG-RYHGHYSFETFSHEKAIMQR  443 (484)
Q Consensus       384 ~~~~~~~~~l--~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~  443 (484)
                      +.+.++++++  ++|+|+||+...+...+.+||||+|.||+| +++|++++++|++.|++...
T Consensus       457 ~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~gg~~~g~~~l~~~~~~k~~~~~  519 (522)
T cd07123         457 KAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTNDKAGSPLNLLRWVSPRTIKET  519 (522)
T ss_pred             HHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchhcCCCcccCCHHHHHHhcceEEEEEe
Confidence            9999999996  599999998776555568999999999996 99999999999999998765


No 52 
>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed
Probab=100.00  E-value=1.2e-89  Score=724.45  Aligned_cols=436  Identities=25%  Similarity=0.407  Sum_probs=404.4

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++++++|++|++.|+++|.++|.++|++++++|++++++|++++++|+|||..++. .|+..++..++++++.
T Consensus        50 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~  128 (524)
T PRK09407         50 VSTAADVEAAFARARAAQRAWAATPVRERAAVLLRFHDLVLENREELLDLVQLETGKARRHAF-EEVLDVALTARYYARR  128 (524)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence            478899999999999999999999999999999999999999999999999999999999986 5999999999999999


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      ++++.+++...... ......+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus       129 ~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~~~~ALaaGN~VIlKPs~~tp~~~~~l~~ll~ea  207 (524)
T PRK09407        129 APKLLAPRRRAGAL-PVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLTALAAVELLYEA  207 (524)
T ss_pred             HHHhhCCccccccC-CCCceEEEEEecceEEEEEeCCCChHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHc
Confidence            88876654321111 11245688999999999999999999999999999999999999999999999999999999999


Q ss_pred             -cCccceeeccC-ChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617          162 -LDCKAIKVTNG-GVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI  239 (484)
Q Consensus       162 -lp~g~v~~v~g-~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i  239 (484)
                       +|+|++|+++| +.+.++.|++| +|.|+||||+++|+.|++.++++++|+++|+|||||+||++   |||++.|++.+
T Consensus       208 GlP~gvv~~v~g~~~~~~~~L~~~-~d~V~fTGs~~~g~~v~~~aa~~~~~v~lElGGknp~iV~~---dADl~~Aa~~i  283 (524)
T PRK09407        208 GLPRDLWQVVTGPGPVVGTALVDN-ADYLMFTGSTATGRVLAEQAGRRLIGFSLELGGKNPMIVLD---DADLDKAAAGA  283 (524)
T ss_pred             CCCcccEEEEecCCchHHHHHHhc-CCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCceeEECC---CCCHHHHHHHH
Confidence             99999999999 56788889876 79999999999999999999999999999999999999999   99999999999


Q ss_pred             HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCceee
Q 038617          240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIVH  317 (484)
Q Consensus       240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~  317 (484)
                      ++++|. |+||.|+++++||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ |+++++
T Consensus       284 ~~~~f~-~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~  362 (524)
T PRK09407        284 VRACFS-NAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLA  362 (524)
T ss_pred             HHHHHh-cCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCcCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEe
Confidence            999999 99999999999999999999999999999999999998 889999999999999999999999864 679999


Q ss_pred             CCCcC--CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccce
Q 038617          318 GGLLD--KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS  395 (484)
Q Consensus       318 gg~~~--~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~  395 (484)
                      ||...  ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++
T Consensus       363 gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~deai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~  442 (524)
T PRK09407        363 GGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLNASVWTGDTARGRAIAARIRA  442 (524)
T ss_pred             CCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCc
Confidence            98642  2478999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeEEECCCccc-cCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617          396 GSLIFNDTLVQ-QLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS  444 (484)
Q Consensus       396 g~v~iN~~~~~-~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~  444 (484)
                      |.|+||+...+ ...+.+||||+|.||+|+++|.+++++|++.|+|+.++
T Consensus       443 G~v~IN~~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~~  492 (524)
T PRK09407        443 GTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTESQTIATQR  492 (524)
T ss_pred             ceEEECCCCCcCcCCCCCCCCCccccccCccchHHHHHHhCCeEEEEEcc
Confidence            99999986643 23567899999999999999999999999999998774


No 53 
>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1. NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis  and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.
Probab=100.00  E-value=4.8e-90  Score=719.70  Aligned_cols=431  Identities=27%  Similarity=0.382  Sum_probs=402.4

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|++++++.|++|++.|++++.++|.++|+++++.|++++++|++++++|+||+..+++. |+..+++.++++++.
T Consensus        15 ~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~   93 (457)
T cd07090          15 CAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEEARV-DIDSSADCLEYYAGL   93 (457)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999999999999999999999999998875 999999999999987


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      .+.... +...   ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.+++.++
T Consensus        94 ~~~~~~-~~~~---~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~~~~~l~~~~~~a  169 (457)
T cd07090          94 APTLSG-EHVP---LPGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEA  169 (457)
T ss_pred             HHHhCC-eeec---cCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcHHHHHHHHHHHHc
Confidence            765422 2111   112446678999999999999999999999999999999999999999999999999999999999


Q ss_pred             -cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617          162 -LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI  239 (484)
Q Consensus       162 -lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i  239 (484)
                       +|+|++|+++|+.+.++.|+.|+ +|+|+||||+.+|+.|++.++++++|+++|+|||||+||++   |||++.|++.+
T Consensus       170 GlP~g~~~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~---dAdl~~Aa~~i  246 (457)
T cd07090         170 GLPDGVFNVVQGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPLIIFD---DADLENAVNGA  246 (457)
T ss_pred             CCCcccEEEEeCChhhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCceEEecCCCCceEECC---CCCHHHHHHHH
Confidence             99999999999777889999998 99999999999999999999999999999999999999999   99999999999


Q ss_pred             HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCceee
Q 038617          240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIVH  317 (484)
Q Consensus       240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~  317 (484)
                      ++++|. |+||.|+++++||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++|+++.+ |+++++
T Consensus       247 ~~~~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~  325 (457)
T cd07090         247 MMANFL-SQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQEGAKVLC  325 (457)
T ss_pred             HHHHHh-cCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHHCCCEEEE
Confidence            999999 99999999999999999999999999999999999999 889999999999999999999999874 779999


Q ss_pred             CCCcC------CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh
Q 038617          318 GGLLD------KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS  391 (484)
Q Consensus       318 gg~~~------~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~  391 (484)
                      ||...      ++|+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++
T Consensus       326 gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~~~~~~~~  405 (457)
T cd07090         326 GGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIA  405 (457)
T ss_pred             CCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHHHHHHHhCCCcCceEEEEcCCHHHHHHHHH
Confidence            98652      258899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617          392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR  443 (484)
Q Consensus       392 ~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~  443 (484)
                      ++++|+|+||+...  ..+.+||||+|.||+|+++|.+++++||+.|++.+.
T Consensus       406 ~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~~~~f~~~k~~~~~  455 (457)
T cd07090         406 QLQAGTCWINTYNI--SPVEVPFGGYKQSGFGRENGTAALEHYTQLKTVYVE  455 (457)
T ss_pred             hCCcCeEEECCCCC--CCCCCCcCCCccCcCCccchHHHHHHHhCeEEEEEe
Confidence            99999999998654  457799999999999999999999999999998754


No 54 
>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like. NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.
Probab=100.00  E-value=4.9e-90  Score=716.87  Aligned_cols=428  Identities=26%  Similarity=0.376  Sum_probs=398.6

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++++++|+||+..++.. |+..+++.+++++..
T Consensus         9 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~i~~l~~~~~~   87 (443)
T cd07152           9 VADAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAGF-EVGAAIGELHEAAGL   87 (443)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHh
Confidence            5789999999999999999999999999999999999999999999999999999999998875 999999999999876


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHH-HHHHHHhcc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECA-SFLAETIPL  160 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~-~~l~~~l~~  160 (484)
                      ..+..+..   .+ ...+...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++ ..+.++|.+
T Consensus        88 ~~~~~~~~---~~-~~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~~l~~~~~~  163 (443)
T cd07152          88 PTQPQGEI---LP-SAPGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARLFEE  163 (443)
T ss_pred             HHHhCCcc---cc-ccCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHHHHHHHHHH
Confidence            65432211   11 11244567899999999999999999999999999999999999999999999996 789999999


Q ss_pred             c-cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617          161 Y-LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR  238 (484)
Q Consensus       161 a-lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~  238 (484)
                      + +|+|++|+++|+.+.+..|++|+ +|.|+||||+.+|+.|.+.++++++|+++|+|||||+||++   |||++.|++.
T Consensus       164 ag~P~gvv~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~---dAdl~~aa~~  240 (443)
T cd07152         164 AGLPAGVLHVLPGGADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLD---DADLDLAASN  240 (443)
T ss_pred             hCcCcCcEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECC---CCCHHHHHHH
Confidence            8 99999999999778899999997 99999999999999999999999999999999999999999   9999999999


Q ss_pred             HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617          239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV  316 (484)
Q Consensus       239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~  316 (484)
                      +++++|. |+||.|+++++||||+++||+|+++|.+++.++++|+| ++++++||++++.+++++.++++++.. |++++
T Consensus       241 i~~~~~~-~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl  319 (443)
T cd07152         241 GAWGAFL-HQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAGARLE  319 (443)
T ss_pred             HHHHHHh-hcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEEE
Confidence            9999999 99999999999999999999999999999999999999 888999999999999999999999874 77899


Q ss_pred             eCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcccee
Q 038617          317 HGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSG  396 (484)
Q Consensus       317 ~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g  396 (484)
                      +||..  +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|
T Consensus       320 ~gg~~--~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~~G  397 (443)
T cd07152         320 AGGTY--DGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLRTG  397 (443)
T ss_pred             eccCc--CCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhCCcC
Confidence            99865  4899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEECCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEE
Q 038617          397 SLIFNDTLVQQLCDVLPFGGVGQSGIG-RYHGHYSFETFSHEKAIM  441 (484)
Q Consensus       397 ~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~  441 (484)
                      +|+||+++.+ ..+.+||||+|.||+| +++|++++++|++.|+++
T Consensus       398 ~v~iN~~~~~-~~~~~pfGG~~~SG~G~~~~g~~~l~~~~~~k~~~  442 (443)
T cd07152         398 MLHINDQTVN-DEPHNPFGGMGASGNGSRFGGPANWEEFTQWQWVT  442 (443)
T ss_pred             eEEECCCCCC-CCCCCCCCCcccccCCCccCcHHHHHHhhceeEEe
Confidence            9999987764 4578999999999999 888999999999999875


No 55 
>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like. NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.
Probab=100.00  E-value=7.4e-90  Score=719.54  Aligned_cols=432  Identities=29%  Similarity=0.401  Sum_probs=399.5

Q ss_pred             CCCHHHHHHHHHHHHHHhH-hcC-CCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFR-SGI-TKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL   79 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~-~w~-~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~   79 (484)
                      .++.+|+++|+++|++||+ .|+ .+|.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.+++++
T Consensus        40 ~~~~~~v~~av~~a~~a~~~~W~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a  119 (481)
T cd07143          40 EATEADVDIAVEVAHAAFETDWGLKVSGSKRGRCLSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYG  119 (481)
T ss_pred             CCCHHHHHHHHHHHHHhhhhhhcccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHH
Confidence            4688999999999999998 599 99999999999999999999999999999999999997765569999999999998


Q ss_pred             HHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617           80 SCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP  159 (484)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~  159 (484)
                      ...+...+.. .  . ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.+++.
T Consensus       120 ~~a~~~~g~~-~--~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~  195 (481)
T cd07143         120 GWADKIHGQV-I--E-TDIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSALYMTKLIP  195 (481)
T ss_pred             HHHHHhcCcc-c--c-CCCCceEEEEEecceeEEEECCCcChHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHH
Confidence            8776543221 1  1 1123356789999999999999999999999999999999999999999999999999999999


Q ss_pred             cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhc-ccCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617          160 LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAK-HLTPVTLELGGKCPAILDTLSSPLDIKVT  235 (484)
Q Consensus       160 ~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~-~~~~~~lelgG~~p~iV~~~~~daDl~~a  235 (484)
                      ++ +|+|++|+++| +.+.++.|+.|+ +|.|+||||+.+|+.|++.++. +++|+++|+|||||+||++   |||++.|
T Consensus       196 ~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~aa~~~~~~~~lElGG~~p~iV~~---dADl~~A  272 (481)
T cd07143         196 EAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAKSNLKKVTLELGGKSPNIVFD---DADLESA  272 (481)
T ss_pred             hcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHHhcCCEEEeecCCCCeeEECC---CCCHHHH
Confidence            98 99999999999 457889999997 9999999999999999998885 7899999999999999999   9999999


Q ss_pred             HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchh-cCC
Q 038617          236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPL-VAD  313 (484)
Q Consensus       236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~-~~~  313 (484)
                      ++.+++++|. |+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+++++.++|+++. .++
T Consensus       273 a~~i~~~~~~-naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga  351 (481)
T cd07143         273 VVWTAYGIFF-NHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGA  351 (481)
T ss_pred             HHHHHHHHHh-ccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCC
Confidence            9999999999 99999999999999999999999999999999999999 88999999999999999999999886 477


Q ss_pred             ceeeCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617          314 AIVHGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG  392 (484)
Q Consensus       314 ~~~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~  392 (484)
                      ++++||..+ ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+.+++++
T Consensus       352 ~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~  431 (481)
T cd07143         352 TVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNAIRVANA  431 (481)
T ss_pred             EEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHh
Confidence            999999764 3689999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617          393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR  443 (484)
Q Consensus       393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~  443 (484)
                      +++|+|+||+...  ..+.+||||+|.||+|+++|.+++++||+.|+++++
T Consensus       432 l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~i~~~  480 (481)
T cd07143         432 LKAGTVWVNCYNL--LHHQVPFGGYKQSGIGRELGEYALENYTQIKAVHIN  480 (481)
T ss_pred             cCcCeEEECCCCC--CCCCCCCCCccccccCcccHHHHHHHHhCeEEEEEe
Confidence            9999999998754  467899999999999999999999999999998753


No 56 
>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like. Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans,  D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent,  L-sorbosone dehydrogenase.
Probab=100.00  E-value=5.3e-90  Score=717.36  Aligned_cols=430  Identities=28%  Similarity=0.408  Sum_probs=399.9

Q ss_pred             CCCHHHHHHHHHHHHHHhHh--cCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRS--GITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL   79 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~   79 (484)
                      .++.+|++++++.|++||+.  |+++|.++|.++|++++++|++++++|++++++|+|||..+++ .|+..+++.+++++
T Consensus        15 ~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~i~~~~~~~   93 (454)
T cd07118          15 EGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQAR-GEIEGAADLWRYAA   93 (454)
T ss_pred             CCCHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHH
Confidence            47899999999999999985  9999999999999999999999999999999999999999997 59999999999988


Q ss_pred             HHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617           80 SCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP  159 (484)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~  159 (484)
                      ...+++.+...   .....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.
T Consensus        94 ~~~~~~~~~~~---~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~~~~~l~~~~~  170 (454)
T cd07118          94 SLARTLHGDSY---NNLGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLI  170 (454)
T ss_pred             HHHHHhcCccc---ccCCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHH
Confidence            76655432211   111123356789999999999999999999999999999999999999999999999999999999


Q ss_pred             cc-cCccceeeccCC-hhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHH
Q 038617          160 LY-LDCKAIKVTNGG-VDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTV  236 (484)
Q Consensus       160 ~a-lp~g~v~~v~g~-~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa  236 (484)
                      ++ +|+|++|+++|+ .+.++.|++|+ +|.|.||||+++|+.|.+.++.+++|+++|+|||||+||++   |||++.|+
T Consensus       171 ~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~n~~iV~~---dAdl~~aa  247 (454)
T cd07118         171 EAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNPQIVFA---DADLDAAA  247 (454)
T ss_pred             hcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEeccCCCCceEECC---CCCHHHHH
Confidence            99 999999999984 56889999997 99999999999999999999999999999999999999999   99999999


Q ss_pred             HHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCc
Q 038617          237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADA  314 (484)
Q Consensus       237 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~  314 (484)
                      +.+++++|. |+||.|+++++||||++++|+|+++|++++.++++|+| ++++++||++++.+.+++.++|+++.+ +++
T Consensus       248 ~~i~~~~f~-~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~  326 (454)
T cd07118         248 DAVVFGVYF-NAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDAGRAEGAT  326 (454)
T ss_pred             HHHHHHHHh-ccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHhCCCE
Confidence            999999999 99999999999999999999999999999999999999 888999999999999999999999864 679


Q ss_pred             eeeCCCcCC--CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617          315 IVHGGLLDK--ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG  392 (484)
Q Consensus       315 ~~~gg~~~~--~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~  392 (484)
                      +++||....  .|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+++++++
T Consensus       327 v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~  406 (454)
T cd07118         327 LLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARR  406 (454)
T ss_pred             EEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHh
Confidence            999997643  689999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617          393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM  441 (484)
Q Consensus       393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~  441 (484)
                      +++|.|+||+...  ..+.+||||+|.||+|+++|++++++||+.|+++
T Consensus       407 l~~g~v~iN~~~~--~~~~~PfgG~~~SG~G~~~g~~~l~~~t~~k~~~  453 (454)
T cd07118         407 IRAGTVWVNTFLD--GSPELPFGGFKQSGIGRELGRYGVEEYTELKTVH  453 (454)
T ss_pred             cCcCEEEECCCCC--CCCCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence            9999999998765  4678999999999999999999999999999875


No 57 
>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like. Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.
Probab=100.00  E-value=9.3e-90  Score=710.56  Aligned_cols=427  Identities=41%  Similarity=0.676  Sum_probs=393.8

Q ss_pred             HHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCC-hhhhhHHHHHHHHHHHHHHHHHHHHhhcC
Q 038617           10 DKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKH-PVETYRDEIGLIKKSAKYALSCLDKWMAP   88 (484)
Q Consensus        10 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~-~~ea~~~ev~~~~~~~~~~~~~~~~~~~~   88 (484)
                      +.+++|++||+.|+++|+.+|.++|++++++|++++++|++++++|+||+ ..++...|+..+++.+++++....++.++
T Consensus         2 ~~~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~~~   81 (434)
T cd07133           2 ALLERQKAAFLANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWMKP   81 (434)
T ss_pred             hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            35788999999999999999999999999999999999999999999985 56776569999999999999988877655


Q ss_pred             ccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccccCcccee
Q 038617           89 KKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIK  168 (484)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~alp~g~v~  168 (484)
                      ..........+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.+++|+|++|
T Consensus        82 ~~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~alP~g~~~  161 (434)
T cd07133          82 SRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEYFDEDEVA  161 (434)
T ss_pred             cccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCcCeEE
Confidence            42211111123456889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eccCChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHhhcccCC
Q 038617          169 VTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCN  248 (484)
Q Consensus       169 ~v~g~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~~~~~~~  248 (484)
                      +++|+.+.++.|+.+++|.|+||||+.+|+.|++.+++++||+++|+|||||+||++   |+|++.|++.+++++|. |+
T Consensus       162 ~v~g~~~~~~~l~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~~~iV~~---dadl~~aa~~i~~~~~~-~~  237 (434)
T cd07133         162 VVTGGADVAAAFSSLPFDHLLFTGSTAVGRHVMRAAAENLTPVTLELGGKSPAIIAP---DADLAKAAERIAFGKLL-NA  237 (434)
T ss_pred             EEeCChHHHHHHHhCCCCEEEEeCchHHHHHHHHHHHhcCceEEEEccCCCcEEEeC---CCCHHHHHHHHHHHHhc-cC
Confidence            999977788888877899999999999999999999999999999999999999999   99999999999999999 99


Q ss_pred             CCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhc-CCceeeCCCcC---CC
Q 038617          249 GQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLV-ADAIVHGGLLD---KE  324 (484)
Q Consensus       249 Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~gg~~~---~~  324 (484)
                      ||.|++++++|||++++|+|+++|+++++++++|+ ++++++||++++.+++++.++++++.+ |+++++||...   .+
T Consensus       238 GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~-~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~  316 (434)
T cd07133         238 GQTCVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTL-ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFAA  316 (434)
T ss_pred             CCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCC-CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcCCCC
Confidence            99999999999999999999999999999998876 577899999999999999999999864 77899888653   35


Q ss_pred             CCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEEECCCc
Q 038617          325 NLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTL  404 (484)
Q Consensus       325 g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~  404 (484)
                      |+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++.
T Consensus       317 g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~  396 (434)
T cd07133         317 TRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTINDTL  396 (434)
T ss_pred             CcEEeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCcc
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999877


Q ss_pred             cccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617          405 VQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM  441 (484)
Q Consensus       405 ~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~  441 (484)
                      .+...+.+||||+|.||+|+++|.+|+++||+.|+|+
T Consensus       397 ~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~  433 (434)
T cd07133         397 LHVAQDDLPFGGVGASGMGAYHGKEGFLTFSHAKPVF  433 (434)
T ss_pred             cccCCCCCCcCCCCcccCCCcCCHHHHHHhcccceec
Confidence            5555688999999999999999999999999999874


No 58 
>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional
Probab=100.00  E-value=6e-90  Score=725.82  Aligned_cols=433  Identities=24%  Similarity=0.338  Sum_probs=403.4

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++++++|++|++.|++++.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.++++++.
T Consensus        69 ~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~  147 (514)
T PRK03137         69 KATKELAEKAMQAALEAFETWKKWSPEDRARILLRAAAIIRRRKHEFSAWLVKEAGKPWAEADA-DTAEAIDFLEYYARQ  147 (514)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence            4788999999999999999999999999999999999999999999999999999999999985 999999999999998


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      ..++.+.+...   ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|++++.++
T Consensus       148 ~~~~~~~~~~~---~~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~a  224 (514)
T PRK03137        148 MLKLADGKPVE---SRPGEHNRYFYIPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEA  224 (514)
T ss_pred             HHHhcCCcccc---CCCCceEEEEEecCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHh
Confidence            88775333211   123446688999999999999999999999999999999999999999999999999999999999


Q ss_pred             -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhc------ccCceeeecCCcCceEEcCCCCCCCH
Q 038617          162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAK------HLTPVTLELGGKCPAILDTLSSPLDI  232 (484)
Q Consensus       162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~------~~~~~~lelgG~~p~iV~~~~~daDl  232 (484)
                       +|+|++|+++| +.+.++.|++|+ +|.|.||||+.+|+.|++.+++      ++||+++|+|||||+||++   |||+
T Consensus       225 GlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~~~l~~v~lElgGk~~~iV~~---daDl  301 (514)
T PRK03137        225 GLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERAAKVQPGQIWLKRVIAEMGGKDAIVVDE---DADL  301 (514)
T ss_pred             CCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHHHHHhcccccccccceEEecCCCCCeEEECC---CCCH
Confidence             99999999998 567889999997 9999999999999999999886      7899999999999999999   9999


Q ss_pred             HHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc
Q 038617          233 KVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV  311 (484)
Q Consensus       233 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~  311 (484)
                      +.|++.+++++|. |+||.|+++++||||+++||+|+++|+++++++++|+| ++. ++||++++.+++++.++++++.+
T Consensus       302 ~~Aa~~i~~~~~~-~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~-~~Gpli~~~~~~~v~~~v~~a~~  379 (514)
T PRK03137        302 DLAAESIVASAFG-FSGQKCSACSRAIVHEDVYDEVLEKVVELTKELTVGNPEDNA-YMGPVINQASFDKIMSYIEIGKE  379 (514)
T ss_pred             HHHHHHHHHHHHh-CCCCCCccCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCcc-CcCCCCCHHHHHHHHHHHHHHHh
Confidence            9999999999999 99999999999999999999999999999999999999 666 99999999999999999999877


Q ss_pred             CCceeeCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHh
Q 038617          312 ADAIVHGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIV  390 (484)
Q Consensus       312 ~~~~~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~  390 (484)
                      ++++++||..+ ..|+|+.|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+++++
T Consensus       380 ~~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~  459 (514)
T PRK03137        380 EGRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVISNNREHLEKAR  459 (514)
T ss_pred             CCEEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH
Confidence            78999998754 35899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccceeeEEECCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEe
Q 038617          391 SGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIG-RYHGHYSFETFSHEKAIMQR  443 (484)
Q Consensus       391 ~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~  443 (484)
                      +++++|+|+||+...+...+.+||||+|.||+| +++|.+++++||+.|+|...
T Consensus       460 ~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~l~~ft~~k~v~~~  513 (514)
T PRK03137        460 REFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKAGGPDYLLLFLQAKTVSEM  513 (514)
T ss_pred             HhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccCCHHHHHHhceEEEEEEe
Confidence            999999999998766555567999999999999 68899999999999998653


No 59 
>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=100.00  E-value=7.2e-90  Score=721.22  Aligned_cols=432  Identities=26%  Similarity=0.367  Sum_probs=402.7

Q ss_pred             CCCHHHHHHHHHHHHHHhH--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFR--SGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL   79 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~   79 (484)
                      .++.+|+++++++|++||+  .|+.+|.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.+++++
T Consensus        53 ~~~~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a  132 (494)
T PRK09847         53 RGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYA  132 (494)
T ss_pred             CCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence            4688999999999999997  59999999999999999999999999999999999999999886669999999999999


Q ss_pred             HHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617           80 SCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP  159 (484)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~  159 (484)
                      +..+.+.+...   + ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.
T Consensus       133 ~~~~~~~g~~~---~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~  208 (494)
T PRK09847        133 EAIDKVYGEVA---T-TSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAK  208 (494)
T ss_pred             HHHHHhcCccc---c-CCCCceeEEEecceeEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHH
Confidence            98887754321   1 1123355789999999999999999999999999999999999999999999999999999999


Q ss_pred             cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHh-cccCceeeecCCcCceEEcCCCCCC-CHHH
Q 038617          160 LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAA-KHLTPVTLELGGKCPAILDTLSSPL-DIKV  234 (484)
Q Consensus       160 ~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~-~~~~~~~lelgG~~p~iV~~~~~da-Dl~~  234 (484)
                      ++ +|+|++|+++| +.+.+..|++|+ +|.|+||||+.+|+.|.+.++ .+++|+++|+|||||+||.+   |+ |++.
T Consensus       209 ~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~~~aa~~~~~~~~lElGGk~~~iV~~---daaDl~~  285 (494)
T PRK09847        209 EAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAGGKSANIVFA---DCPDLQQ  285 (494)
T ss_pred             HcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhhCCCeEEEecCCCCeeEEcC---CccCHHH
Confidence            98 99999999999 667889999997 999999999999999999888 58899999999999999999   97 9999


Q ss_pred             HHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhcCC
Q 038617          235 TVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLVAD  313 (484)
Q Consensus       235 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~~~  313 (484)
                      |++.+++++|. |+||.|++++|||||++++|+|+++|+++++++++|+| ++++.+||++++.+++++.++|+++.+.+
T Consensus       286 Aa~~i~~~~~~-~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~G  364 (494)
T PRK09847        286 AASATAAGIFY-NQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKG  364 (494)
T ss_pred             HHHHHHHHHHh-cCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCC
Confidence            99999999999 99999999999999999999999999999999999999 88999999999999999999999997655


Q ss_pred             ceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcc
Q 038617          314 AIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGT  393 (484)
Q Consensus       314 ~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l  393 (484)
                      ++++||.....+.|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+.++++++
T Consensus       365 ~i~~gg~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~v~t~d~~~a~~~~~~l  444 (494)
T PRK09847        365 QLLLDGRNAGLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRL  444 (494)
T ss_pred             eEEECCccCCCCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhC
Confidence            88999876556889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617          394 SSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR  443 (484)
Q Consensus       394 ~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~  443 (484)
                      ++|+|+||+...  ..+.+||||+|.||+|+++|.+++++||+.|+|++.
T Consensus       445 ~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~  492 (494)
T PRK09847        445 KAGSVFVNNYND--GDMTVPFGGYKQSGNGRDKSLHALEKFTELKTIWIS  492 (494)
T ss_pred             CcceEEECCCCC--CCCCCCcCCCcccccCccchHHHHHHhhceEEEEEe
Confidence            999999998654  456789999999999999999999999999998764


No 60 
>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like. NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.
Probab=100.00  E-value=8.7e-90  Score=721.78  Aligned_cols=432  Identities=28%  Similarity=0.406  Sum_probs=400.7

Q ss_pred             CCCHHHHHHHHHHHHHHhHh-cCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRS-GITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALS   80 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~   80 (484)
                      .++.+|+++++++|++|++. |+++|.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.++++++
T Consensus        41 ~~~~~~v~~ai~~A~~A~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~  120 (484)
T cd07144          41 AAGEEDVDKAVKAARKAFESWWSKVTGEERGELLDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAG  120 (484)
T ss_pred             CCCHHHHHHHHHHHHHHHHhhHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHH
Confidence            47889999999999999996 88999999999999999999999999999999999999877645699999999999998


Q ss_pred             HHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhcc
Q 038617           81 CLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPL  160 (484)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~  160 (484)
                      ..+++.+.. ..   ...+...+..++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.+++.+
T Consensus       121 ~~~~~~g~~-~~---~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~  196 (484)
T cd07144         121 WADKIQGKT-IP---TSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSLLYFANLVKE  196 (484)
T ss_pred             HHHHhcCce-ec---CCCCceEEEEEecceEEEEECcCCCHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHH
Confidence            887763221 11   11233457889999999999999999999999999999999999999999999999999999999


Q ss_pred             c-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHH
Q 038617          161 Y-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVK  237 (484)
Q Consensus       161 a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~  237 (484)
                      + +|+|++|+++| +.+.++.|++|+ +|.|+||||+.+|+.|++.++++++|+++|+|||||+||++   |||++.|++
T Consensus       197 aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a~~~~~~~~lElGGk~p~iV~~---dADl~~Aa~  273 (484)
T cd07144         197 AGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAAQNLKAVTLECGGKSPALVFE---DADLDQAVK  273 (484)
T ss_pred             hCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCeEEEEcCCCCeEEECC---CCCHHHHHH
Confidence            9 99999999999 667889999997 99999999999999999999999999999999999999999   999999999


Q ss_pred             HHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHh-hcCCCC-CCCCccccccCHHHHHHHHHHhhchh-cCCc
Q 038617          238 RIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKK-FYGENP-KDSKSISRIINEYHFERLRKLLKDPL-VADA  314 (484)
Q Consensus       238 ~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~-~~~~  314 (484)
                      .+++++|. |+||.|+++++||||+++||+|+++|++++.+ +++|+| ++++++||++++.+++++.++++++. ++++
T Consensus       274 ~i~~~~f~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~  352 (484)
T cd07144         274 WAAAGIMY-NSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAK  352 (484)
T ss_pred             HHHHHHHh-cCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCE
Confidence            99999999 99999999999999999999999999999985 788999 88999999999999999999999986 4778


Q ss_pred             eeeCCCcCC----CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHh
Q 038617          315 IVHGGLLDK----ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIV  390 (484)
Q Consensus       315 ~~~gg~~~~----~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~  390 (484)
                      +++||....    .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+.+++
T Consensus       353 v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~t~d~~~a~~~~  432 (484)
T cd07144         353 LVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAAAVFTKDIRRAHRVA  432 (484)
T ss_pred             EEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHH
Confidence            999987532    5899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617          391 SGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR  443 (484)
Q Consensus       391 ~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~  443 (484)
                      +++++|+|+||++..  ..+.+||||+|.||+|+++|.+++++||+.|+++.+
T Consensus       433 ~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~  483 (484)
T cd07144         433 RELEAGMVWINSSND--SDVGVPFGGFKMSGIGRELGEYGLETYTQTKAVHIN  483 (484)
T ss_pred             HhcCcCEEEECCCCC--CCCCCCcCCcccCcCCCCchHHHHHHhhceEEEEEe
Confidence            999999999998754  457799999999999999999999999999998764


No 61 
>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like. ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate.  P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.
Probab=100.00  E-value=1.1e-89  Score=722.16  Aligned_cols=435  Identities=24%  Similarity=0.361  Sum_probs=404.7

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++++++|++|++.|+++|.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++.++++++.
T Consensus        51 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~  129 (500)
T cd07083          51 KADKAEAEAALEAAWAAFKTWKDWPQEDRARLLLKAADLLRRRRRELIATLTYEVGKNWVEAI-DDVAEAIDFIRYYARA  129 (500)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence            478899999999999999999999999999999999999999999999999999999999976 5999999999999999


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      +..+.+......  ...+....++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.++
T Consensus       130 ~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~ea  207 (500)
T cd07083         130 ALRLRYPAVEVV--PYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEA  207 (500)
T ss_pred             HHHhcCcccccC--CCCCceEEEEEeccceEEEEcCCccHHHHHHHHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHHc
Confidence            887754432111  112445678899999999999999999999999999999999999999999999999999999999


Q ss_pred             -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccc------CceeeecCCcCceEEcCCCCCCCH
Q 038617          162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHL------TPVTLELGGKCPAILDTLSSPLDI  232 (484)
Q Consensus       162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~------~~~~lelgG~~p~iV~~~~~daDl  232 (484)
                       +|+|++|+++| +.+.+..|++|+ +|.|+||||+.+|+.|.+.+++++      +|+++|+|||||+||++   |||+
T Consensus       208 GlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~v~~~aa~~~~~~~~~~~v~lElgG~~~~iV~~---dadl  284 (500)
T cd07083         208 GFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAARLAPGQTWFKRLYVETGGKNAIIVDE---TADF  284 (500)
T ss_pred             CCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHhhccccccccCcEEEecCCCCeEEECC---CCCH
Confidence             99999999999 567889999997 999999999999999999998886      99999999999999999   9999


Q ss_pred             HHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc
Q 038617          233 KVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV  311 (484)
Q Consensus       233 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~  311 (484)
                      +.|++.+++++|. |+||.|++++++|||++++|+|+++|+++++++++|+| ++++++||++++.+.+++.++++++..
T Consensus       285 ~~aa~~i~~~~f~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~  363 (500)
T cd07083         285 ELVVEGVVVSAFG-FQGQKCSAASRLILTQGAYEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKN  363 (500)
T ss_pred             HHHHHHHHHHHHh-hcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHh
Confidence            9999999999999 99999999999999999999999999999999999999 888999999999999999999999877


Q ss_pred             CCceeeCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeC--CHHHHHHHHhcCCCCceEEEecCCHHHHHH
Q 038617          312 ADAIVHGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLN--NIQESIEFINSRPKPLAIYAFTKDETFKKQ  388 (484)
Q Consensus       312 ~~~~~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~--~~~eai~~~n~~~~gl~a~v~t~d~~~~~~  388 (484)
                      ++++++||..+ ..|+|+.|||+.+++++|++++||+||||++|++|+  |+||||+++|+++|||+++|||+|.+.+.+
T Consensus       364 ~g~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~  443 (500)
T cd07083         364 EGQLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVYSRKREHLEE  443 (500)
T ss_pred             CCEEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCCCCCceEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHH
Confidence            67999998764 358899999999999999999999999999999999  999999999999999999999999999999


Q ss_pred             HhhccceeeEEECCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEe
Q 038617          389 IVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIG-RYHGHYSFETFSHEKAIMQR  443 (484)
Q Consensus       389 ~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~  443 (484)
                      +++++++|+|+||+.+.+...+.+||||+|.||+| +.+|.+++++|++.|++..+
T Consensus       444 ~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~k~~~~~  499 (500)
T cd07083         444 ARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTGGPHYLRRFLEMKAVAER  499 (500)
T ss_pred             HHHhCCeeEEEECCCCCCCCCCCCCCCccccccCCCcccCHHHHHHhhheeEEEEc
Confidence            99999999999999876555567999999999999 67899999999999998653


No 62 
>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like. Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.
Probab=100.00  E-value=9.2e-90  Score=717.00  Aligned_cols=430  Identities=27%  Similarity=0.405  Sum_probs=400.8

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcC-CCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGI-TKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALS   80 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~   80 (484)
                      .++.+|++++++.|++|++.|. ++|.++|.++|++++++|++++++|++++++|+|||..+++. |+..+++.++++++
T Consensus        15 ~~~~~dv~~av~~a~~A~~~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~   93 (454)
T cd07109          15 RGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQARA-DVEAAARYFEYYGG   93 (454)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHH
Confidence            5789999999999999999876 999999999999999999999999999999999999999974 99999999999988


Q ss_pred             HHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhcc
Q 038617           81 CLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPL  160 (484)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~  160 (484)
                      ..+++.+...   + ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.+
T Consensus        94 ~~~~~~g~~~---~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~  169 (454)
T cd07109          94 AADKLHGETI---P-LGPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEE  169 (454)
T ss_pred             HHHHhcCccc---c-cCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH
Confidence            8776643221   1 11234678899999999999999999999999999999999999999999999999999999999


Q ss_pred             c-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHH
Q 038617          161 Y-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVK  237 (484)
Q Consensus       161 a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~  237 (484)
                      + +|+|++|+++| +.+.++.|++|+ +|.|.||||+.+|+.|++.++++++|+++|+|||||+||++   |||++.|++
T Consensus       170 aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~p~~lElgG~~~~iV~~---daDl~~Aa~  246 (454)
T cd07109         170 AGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKSPQIVFA---DADLEAALP  246 (454)
T ss_pred             cCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEECCCCCceEECC---CCCHHHHHH
Confidence            8 99999999999 678899999998 99999999999999999999999999999999999999999   999999999


Q ss_pred             HHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617          238 RIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLV-ADAIV  316 (484)
Q Consensus       238 ~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~  316 (484)
                      .+++++|. |+||.|+++++||||++++|+|+++|++++.++++|+|.+++++||++++.+.+++.++++++.+ |++++
T Consensus       247 ~i~~~~~~-~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~~l  325 (454)
T cd07109         247 VVVNAIIQ-NAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLEDPDLGPLISAKQLDRVEGFVARARARGARIV  325 (454)
T ss_pred             HHHHHHHh-ccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcccCcCCCccCHHHHHHHHHHHHHHHhCCCEEE
Confidence            99999999 99999999999999999999999999999999999999557899999999999999999999864 67899


Q ss_pred             eCCCcC----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617          317 HGGLLD----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG  392 (484)
Q Consensus       317 ~gg~~~----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~  392 (484)
                      +||...    ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+++++++
T Consensus       326 ~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deAi~~~n~~~~gL~~~i~t~d~~~~~~~~~~  405 (454)
T cd07109         326 AGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARR  405 (454)
T ss_pred             eCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHHHHHhhCCCCCceEEEECCCHHHHHHHHHh
Confidence            988653    2589999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617          393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM  441 (484)
Q Consensus       393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~  441 (484)
                      +++|+|+||+...+ ..+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus       406 l~~g~v~iN~~~~~-~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~i~  453 (454)
T cd07109         406 LRAGQVFVNNYGAG-GGIELPFGGVKKSGHGREKGLEALYNYTQTKTVA  453 (454)
T ss_pred             cCcCeEEECCCCCC-CCCCCCcCCcccCcCCccchHHHHHHHhceeEEe
Confidence            99999999987633 3568899999999999999999999999999875


No 63 
>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like. Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.
Probab=100.00  E-value=1.1e-89  Score=721.00  Aligned_cols=432  Identities=27%  Similarity=0.371  Sum_probs=402.4

Q ss_pred             CCCHHHHHHHHHHHHHHhH--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFR--SGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL   79 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~   79 (484)
                      .++.+|++++++.|++||+  .|+++|.++|.++|++++++|++++++|++++++|+|||..+++. |+..+++.+++++
T Consensus        31 ~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~  109 (482)
T cd07119          31 EGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELARLETLNTGKTLRESEI-DIDDVANCFRYYA  109 (482)
T ss_pred             CCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHH
Confidence            4788999999999999997  599999999999999999999999999999999999999999985 9999999999999


Q ss_pred             HHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617           80 SCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP  159 (484)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~  159 (484)
                      ...++..... ..   ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.
T Consensus       110 ~~~~~~~~~~-~~---~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~~~  185 (482)
T cd07119         110 GLATKETGEV-YD---VPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIALFELIE  185 (482)
T ss_pred             HHHHHhcCcc-cc---CCCCceEEEEEeeeeeEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCccccHHHHHHHHHHH
Confidence            8887643322 11   1133456789999999999999999999999999999999999999999999999999999999


Q ss_pred             cc-cCccceeeccCC-hhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHH
Q 038617          160 LY-LDCKAIKVTNGG-VDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTV  236 (484)
Q Consensus       160 ~a-lp~g~v~~v~g~-~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa  236 (484)
                      ++ +|+|++|+++|+ .+.++.|++|+ +|+|.||||+.+|+.|++.++++++|+++|+|||||+||++   |||++.|+
T Consensus       186 ~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGkn~~iV~~---dADl~~Aa  262 (482)
T cd07119         186 EAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAGNVKKVALELGGKNPNIVFA---DADFETAV  262 (482)
T ss_pred             HcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCceEECC---CCCHHHHH
Confidence            98 999999999984 45889999997 99999999999999999999999999999999999999999   99999999


Q ss_pred             HHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCc
Q 038617          237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADA  314 (484)
Q Consensus       237 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~  314 (484)
                      +.+++++|. |+||.|+++++||||+++||+|+++|++++.++++|+| ++++++||++++.+++++.++++++.+ |++
T Consensus       263 ~~i~~~~~~-~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~  341 (482)
T cd07119         263 DQALNGVFF-NAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGAR  341 (482)
T ss_pred             HHHHHHHHh-cCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCE
Confidence            999999999 99999999999999999999999999999999999998 888999999999999999999998864 678


Q ss_pred             eeeCCCcCC-----CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 038617          315 IVHGGLLDK-----ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQI  389 (484)
Q Consensus       315 ~~~gg~~~~-----~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~  389 (484)
                      +++||....     .|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+.++
T Consensus       342 v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~  421 (482)
T cd07119         342 LVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKDIARANRV  421 (482)
T ss_pred             EEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence            999986532     589999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617          390 VSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS  444 (484)
Q Consensus       390 ~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~  444 (484)
                      ++++++|+|+||+...  ..+.+||||+|.||+|+++|++|+++||+.|+++...
T Consensus       422 ~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~~~  474 (482)
T cd07119         422 ARRLRAGTVWINDYHP--YFAEAPWGGYKQSGIGRELGPTGLEEYQETKHININL  474 (482)
T ss_pred             HHhcCcceEEECCCCC--CCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEec
Confidence            9999999999998643  4678999999999999999999999999999998764


No 64 
>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like. 4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.
Probab=100.00  E-value=8.7e-90  Score=716.98  Aligned_cols=432  Identities=27%  Similarity=0.413  Sum_probs=401.9

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.++++++++.|++|++.|+.+|.++|.++|++++++|++++++|++++++|+||+..++...|+..+++.+++++..
T Consensus        15 ~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~i~~l~~~~~~   94 (453)
T cd07115          15 QASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAARRLDVPRAADTFRYYAGW   94 (453)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999999999999999999999999999766999999999998876


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      .++..+..   .+ ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.+++.++
T Consensus        95 ~~~~~g~~---~~-~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~~~~~a  170 (453)
T cd07115          95 ADKIEGEV---IP-VRGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEA  170 (453)
T ss_pred             HHHhcCce---ec-CCCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHhc
Confidence            65543211   11 112345688999999999999999999999999999999999999999999999999999999999


Q ss_pred             -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617          162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR  238 (484)
Q Consensus       162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~  238 (484)
                       +|+|++|+++| +.+.++.|++|+ +|.|+||||+.+|+.|++.++.++||+++|+|||||+||++   |||++.|++.
T Consensus       171 GlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~p~iV~~---dAdl~~aa~~  247 (453)
T cd07115         171 GFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSANIVFA---DADLDAAVRA  247 (453)
T ss_pred             CcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCeEEEecCCCCceEECC---CCCHHHHHHH
Confidence             99999999999 556889999997 99999999999999999999999999999999999999999   9999999999


Q ss_pred             HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617          239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV  316 (484)
Q Consensus       239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~  316 (484)
                      +++++|. |+||.|+++++||||++++|+|+++|++++.++++|+| ++++++||++++.+++++.++|+++.. |++++
T Consensus       248 i~~~~~~-~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~  326 (453)
T cd07115         248 AATGIFY-NQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVGREEGARLL  326 (453)
T ss_pred             HHHHHHh-ccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEE
Confidence            9999999 99999999999999999999999999999999999999 889999999999999999999998864 67899


Q ss_pred             eCCCcCC-CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccce
Q 038617          317 HGGLLDK-ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS  395 (484)
Q Consensus       317 ~gg~~~~-~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~  395 (484)
                      +||..+. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++
T Consensus       327 ~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~ifs~d~~~~~~~~~~l~~  406 (453)
T cd07115         327 TGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKA  406 (453)
T ss_pred             eCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCc
Confidence            9987543 688999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617          396 GSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR  443 (484)
Q Consensus       396 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~  443 (484)
                      |+|+||+...  ..+.+||||+|.||+|+++|.+|+++|++.|+++++
T Consensus       407 G~v~iN~~~~--~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~~~~~  452 (453)
T cd07115         407 GTVWINTYNR--FDPGSPFGGYKQSGFGREMGREALDEYTEVKSVWVN  452 (453)
T ss_pred             cEEEECCCCC--CCCCCCCCCcccccCCcCchHHHHHHhhceEEEEEe
Confidence            9999998653  467899999999999999999999999999998653


No 65 
>TIGR01804 BADH glycine betaine aldehyde dehydrogenase. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).
Probab=100.00  E-value=8.4e-90  Score=719.29  Aligned_cols=427  Identities=29%  Similarity=0.415  Sum_probs=397.8

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++++++|++|++.|+++|.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.+++++..
T Consensus        31 ~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~  110 (467)
T TIGR01804        31 EATREDVERAIAAARRAQGEWASMTPEERGRILRRIAELIRERNEELAKLETLDTGKTLEETSVADMDDIADVFEFFAGL  110 (467)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHH
Confidence            47889999999999999999999999999999999999999999999999999999999999556999999999999988


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      .++..+.. .  .. ..+...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..++++|.++
T Consensus       111 ~~~~~~~~-~--~~-~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~a  186 (467)
T TIGR01804       111 ADKDGGEI-I--PL-PIPSFSYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSEITPLTALKVAELMEEA  186 (467)
T ss_pred             HHHhCCcc-c--cC-CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCccCcHHHHHHHHHHHHc
Confidence            77643221 1  11 11234578999999999999999999999999999999999999999999999999999999999


Q ss_pred             -cCccceeeccCC-hhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617          162 -LDCKAIKVTNGG-VDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR  238 (484)
Q Consensus       162 -lp~g~v~~v~g~-~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~  238 (484)
                       +|+|++|+++|+ .+.++.|+.|+ +|+|+||||+.+|+.|++.+++++||+++|+|||||+||++   |||++.|++.
T Consensus       187 glP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~l~~~~lElGG~~~~iV~~---dADl~~Aa~~  263 (467)
T TIGR01804       187 GLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAADHLKHVTMELGGKSPLIVFD---DADLELAVDQ  263 (467)
T ss_pred             CcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEecCCCCeeEECC---CCCHHHHHHH
Confidence             999999999984 77889999998 99999999999999999999999999999999999999999   9999999999


Q ss_pred             HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617          239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV  316 (484)
Q Consensus       239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~  316 (484)
                      +++++|. |+||.|+++++||||+++||+|+++|+++++++++|+| ++++++||++++.+.+++.++++++.. +++++
T Consensus       264 i~~~~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl  342 (467)
T TIGR01804       264 AMNGNFF-SAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFDEATEMGPLISAEHRDKVESYIEKGKEEGATLA  342 (467)
T ss_pred             HHHHHHH-hcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEE
Confidence            9999999 99999999999999999999999999999999999999 889999999999999999999998864 67899


Q ss_pred             eCCCcC-----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh
Q 038617          317 HGGLLD-----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS  391 (484)
Q Consensus       317 ~gg~~~-----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~  391 (484)
                      +||..+     .+|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++
T Consensus       343 ~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~~~~~~~~  422 (467)
T TIGR01804       343 CGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSEDEVIARANDTIYGLAAGVFTADLGRAHRVAN  422 (467)
T ss_pred             eCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHH
Confidence            998653     258899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhcc
Q 038617          392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEK  438 (484)
Q Consensus       392 ~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k  438 (484)
                      ++++|+|+||++..  ..+.+||||+|.||+|+++|.+++++||+.|
T Consensus       423 ~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~~  467 (467)
T TIGR01804       423 QLKAGTVWINDFHP--YPAEAPWGGYKQSGIGRENGKAGLAEYTEVK  467 (467)
T ss_pred             hCCcceEEECCCCC--CCCCCCcCCcccCccCCCChHHHHHHHhccC
Confidence            99999999998654  4567899999999999999999999999865


No 66 
>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1. This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.
Probab=100.00  E-value=9.8e-90  Score=723.58  Aligned_cols=435  Identities=21%  Similarity=0.271  Sum_probs=400.9

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHH-hcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQ-DNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALS   80 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~-~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~   80 (484)
                      .++.+|+++|+++|++||+.|+++|..+|.++|++++++|+ +++++|+++++.|+||++.++...++..+++.+++++.
T Consensus        65 ~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~k~a~~l~~~~~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~  144 (533)
T TIGR01236        65 NATEEDAAKAVEAALDAKKDWSALPFYDRAAIFLKAADLLSGPYREEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVK  144 (533)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHH
Confidence            57889999999999999999999999999999999999999 59999999999999999999976459999999999998


Q ss_pred             HHHHhhcCccccCccccCCCcceEEeecc-eEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617           81 CLDKWMAPKKRRLPLLFFPASGEVVSEPF-GVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP  159 (484)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~  159 (484)
                      ..+++.+...   .....+...++.++|+ |||++|+|||||+....+++++|| +||+||+|||+.+|.++..|++++.
T Consensus       145 ~a~~~~~~~~---~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~  220 (533)
T TIGR01236       145 YARELYEQQP---SESAPGEWNRTDYRPLEGFVYAISPFNFTAIAGNLPGAPAL-MGNTVIWKPSITATLSNYLTMRILE  220 (533)
T ss_pred             HHHHhcCccc---cCCCCCceeEEEEecCCCEEEEEeCCchHHHHHHHHHHHHH-hCCeEEEECCCcCCHHHHHHHHHHH
Confidence            8776643321   0111234568899999 999999999999999999999999 7999999999999999999999999


Q ss_pred             cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCc------eeeecCCcCceEEcCCCCCC
Q 038617          160 LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTP------VTLELGGKCPAILDTLSSPL  230 (484)
Q Consensus       160 ~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~------~~lelgG~~p~iV~~~~~da  230 (484)
                      ++ +|+|++|+++| +.+.++.|+.|+ ||.|+||||+++|+.|++.++++++|      +++|+|||||+||++   ||
T Consensus       221 ~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i~~~aa~~l~~~~~~~~v~lElGGknp~IV~~---dA  297 (533)
T TIGR01236       221 EAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKHLWKWVASNLDRYHNFPRIVGETGGKDFHVVHP---SA  297 (533)
T ss_pred             hcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhhccccccCCcEEEEcCCCCeEEECC---CC
Confidence            99 99999999999 578899999997 99999999999999999999998874      999999999999999   99


Q ss_pred             CHHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhch
Q 038617          231 DIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDP  309 (484)
Q Consensus       231 Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a  309 (484)
                      |++.|++.+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++++++
T Consensus       298 Dl~~Aa~~i~~~~f~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a  376 (533)
T TIGR01236       298 DIDHAVTATIRGAFE-YQGQKCSAASRLYVPHSVWPRFKDELLAELAEVKVGDPDDFSNFMGAVIDERSFVKNVKYIERA  376 (533)
T ss_pred             CHHHHHHHHHHHHHh-hCCCCCcCCeeEEEchhHHHHHHHHHHHHHhcCCcCCCCCCCCcccccCCHHHHHHHHHHHHHH
Confidence            999999999999999 99999999999999999999999999999999999999 8889999999999999999999998


Q ss_pred             hc-C--CceeeCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCC--HHHHHHHH-hcCCCCceEEEecCC
Q 038617          310 LV-A--DAIVHGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNN--IQESIEFI-NSRPKPLAIYAFTKD  382 (484)
Q Consensus       310 ~~-~--~~~~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~a~v~t~d  382 (484)
                      .+ +  +++++||..+ ..|+|++|||+.+++++|++++||+||||++|++|+|  ++|||+++ |+++|||++||||+|
T Consensus       377 ~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~~eE~FGPVl~v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d  456 (533)
T TIGR01236       377 KGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPLMVEEIFGPVLTVYVYPDDKYKEILDVVDSTSRYGLTGAVFAKD  456 (533)
T ss_pred             HhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcccCCCCeEEEEEeCCCCHHHHHHHHhcCCCcCceEEEEeCC
Confidence            75 3  5899998754 3589999999999999999999999999999999998  59999999 889999999999999


Q ss_pred             HHHHHHHhhccc--eeeEEECCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEec
Q 038617          383 ETFKKQIVSGTS--SGSLIFNDTLVQQLCDVLPFGGVGQSGIG-RYHGHYSFETFSHEKAIMQRS  444 (484)
Q Consensus       383 ~~~~~~~~~~l~--~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~~  444 (484)
                      .+.+.+++++++  +|+|+||+.+.+...+.+||||+|.||+| +++|.+++++|++.|++....
T Consensus       457 ~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~~~  521 (533)
T TIGR01236       457 RQAILEADKRLRFAAGNFYINDKPTGAVVGQQPFGGARGSGTNDKAGGPLNLLRWTSARSIKETF  521 (533)
T ss_pred             HHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCCCCcccccCCcccCCHHHHHHhcceEEEEEEc
Confidence            999999999977  99999998776555578999999999998 999999999999999987764


No 67 
>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like. Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde  derived from cellular lipid peroxidation.
Probab=100.00  E-value=2.6e-89  Score=715.70  Aligned_cols=438  Identities=30%  Similarity=0.496  Sum_probs=403.0

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++++++|++|++.|+++|.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.++++++.
T Consensus        14 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~e~~~~~~~~~~~~~~   93 (465)
T cd07098          14 ADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLGEILVTCEKIRWTLKH   93 (465)
T ss_pred             CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999999999999999999999999777999999999999988


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHh---
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI---  158 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l---  158 (484)
                      .+.+.................+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++   
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~~~~~~~~~  173 (465)
T cd07098          94 GEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGFFLSIIREC  173 (465)
T ss_pred             HHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHH
Confidence            77655432211111011234578899999999999999999999999999999999999999999999999877665   


Q ss_pred             -ccc-cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617          159 -PLY-LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVT  235 (484)
Q Consensus       159 -~~a-lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~a  235 (484)
                       .++ +|+|++|+++|+.+.++.|+.|+ ||.|.||||+.+|+.|.+.++++++|+++|+|||||+||++   |||++.|
T Consensus       174 l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~~~~~~~lelgG~~~~iV~~---dadl~~a  250 (465)
T cd07098         174 LAACGHDPDLVQLVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPVVLELGGKDPAIVLD---DADLDQI  250 (465)
T ss_pred             HHhcCCCCCeEEEEECCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEECC---CCCHHHH
Confidence             466 99999999999668899999997 99999999999999999999999999999999999999999   9999999


Q ss_pred             HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CC
Q 038617          236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-AD  313 (484)
Q Consensus       236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~  313 (484)
                      ++.+++++|. |+||.|+++++||||++++|+|+++|++++.++++|+| ++++++||++++.+++++.++++++.. |+
T Consensus       251 ~~~i~~~~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga  329 (465)
T cd07098         251 ASIIMRGTFQ-SSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGA  329 (465)
T ss_pred             HHHHHHHHHh-cCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCC
Confidence            9999999999 99999999999999999999999999999999999999 889999999999999999999998864 78


Q ss_pred             ceeeCCCcC-----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHH
Q 038617          314 AIVHGGLLD-----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQ  388 (484)
Q Consensus       314 ~~~~gg~~~-----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~  388 (484)
                      ++++||...     ..|+|+.|||+.+++++|++++||+||||++|++|+|+|||++++|+++|||++||||+|.+.+++
T Consensus       330 ~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~t~d~~~~~~  409 (465)
T cd07098         330 RLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGKDIKRARR  409 (465)
T ss_pred             EEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHH
Confidence            999988542     258999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617          389 IVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR  443 (484)
Q Consensus       389 ~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~  443 (484)
                      +++++++|.|+||....+...+.+||||+|.||+|+++|.+++++|++.|++.++
T Consensus       410 ~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~~  464 (465)
T cd07098         410 IASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCNPKSVTED  464 (465)
T ss_pred             HHHhCCcceEEECCCCCCCCCCCCCcCccccccCCccChHHHHHHhheeEEEEEe
Confidence            9999999999999876555567899999999999999999999999999998764


No 68 
>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase  AldA-like. The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase  PDB structure,  3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase  AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.
Probab=100.00  E-value=1.6e-89  Score=718.47  Aligned_cols=430  Identities=27%  Similarity=0.352  Sum_probs=401.3

Q ss_pred             CCCHHHHHHHHHHHHHHhHh--cCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRS--GITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL   79 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~   79 (484)
                      .++.+|+++++++|++|++.  |+++|.++|.++|++++++|++++++|++++++|+|||..++...|+..++..+++++
T Consensus        32 ~~~~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~  111 (471)
T cd07139          32 EATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYA  111 (471)
T ss_pred             CCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence            46889999999999999985  9999999999999999999999999999999999999998876669999999999999


Q ss_pred             HHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617           80 SCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP  159 (484)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~  159 (484)
                      ...+++...+....   ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.+++.
T Consensus       112 ~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKps~~~p~~~~~l~~~~~  188 (471)
T cd07139         112 ALARDFPFEERRPG---SGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDAYLLAEAAE  188 (471)
T ss_pred             HHHHHhcCCccccC---CCCceEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcCCHHHHHHHHHHH
Confidence            88877643332111   123456789999999999999999999999999999999999999999999999999999999


Q ss_pred             cc-cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHH
Q 038617          160 LY-LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVK  237 (484)
Q Consensus       160 ~a-lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~  237 (484)
                      ++ +|+|++|+++|+.+.+..|++|+ +|.|+||||+.+|+.|++.++++++|+++|+|||||+||++   |||++.|++
T Consensus       189 ~aglP~gv~~~v~g~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~~~~~~~~~~lElGG~np~iV~~---dADl~~aa~  265 (471)
T cd07139         189 EAGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCGERLARVTLELGGKSAAIVLD---DADLDAAVP  265 (471)
T ss_pred             HcCCCCCcEEEEeCCHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCEEEEEcCCCCeeEECC---CCCHHHHHH
Confidence            99 99999999999777889999997 99999999999999999999999999999999999999999   999999999


Q ss_pred             HHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchh-cCCce
Q 038617          238 RIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPL-VADAI  315 (484)
Q Consensus       238 ~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~-~~~~~  315 (484)
                      .+++++|. |+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+++++.++++++. +++++
T Consensus       266 ~i~~~~~~-~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v  344 (471)
T cd07139         266 GLVPASLM-NNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARL  344 (471)
T ss_pred             HHHHHHHh-cCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEE
Confidence            99999999 99999999999999999999999999999999999999 88899999999999999999999876 46799


Q ss_pred             eeCCCcCC---CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617          316 VHGGLLDK---ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG  392 (484)
Q Consensus       316 ~~gg~~~~---~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~  392 (484)
                      ++||..+.   .|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+.+++++
T Consensus       345 ~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~i~s~d~~~~~~~~~~  424 (471)
T cd07139         345 VTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWTADVERGLAVARR  424 (471)
T ss_pred             EeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHh
Confidence            99987532   488999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617          393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM  441 (484)
Q Consensus       393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~  441 (484)
                      +++|+|+||++.   ..+.+||||+|.||+|+++|.+|+++||+.|+++
T Consensus       425 l~~G~v~iN~~~---~~~~~PfgG~k~SG~G~~~g~~~~~~ft~~k~i~  470 (471)
T cd07139         425 IRTGTVGVNGFR---LDFGAPFGGFKQSGIGREGGPEGLDAYLETKSIY  470 (471)
T ss_pred             CCcceEEECCCC---CCCCCCCCCcccccCCccchHHHHHHHhceeEEe
Confidence            999999999865   3578999999999999999999999999999985


No 69 
>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.
Probab=100.00  E-value=2.2e-89  Score=714.57  Aligned_cols=430  Identities=24%  Similarity=0.374  Sum_probs=402.7

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|++++++.|++|++.|++++.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++.++++++.
T Consensus        14 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~-~ev~~~~~~~~~~~~~   92 (452)
T cd07102          14 LASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQAG-GEIRGMLERARYMISI   92 (452)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence            478899999999999999999999999999999999999999999999999999999999987 5999999999999998


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      ++++.+.....   ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..|.+++.++
T Consensus        93 ~~~~~~~~~~~---~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~a  169 (452)
T cd07102          93 AEEALADIRVP---EKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGERFAAAFAEA  169 (452)
T ss_pred             HHHhcCCcccC---CCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHhc
Confidence            88775543211   112345678999999999999999999999999999999999999999999999999999999999


Q ss_pred             -cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617          162 -LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI  239 (484)
Q Consensus       162 -lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i  239 (484)
                       +|+|++|+++|+.+.+..|++|+ +|.|+||||+++|+.|++.++++++|+++|+|||||+||++   |||++.|++.+
T Consensus       170 GlP~g~~~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~v~lelgG~~~~iV~~---dADl~~aa~~i  246 (452)
T cd07102         170 GLPEGVFQVLHLSHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDPAYVRP---DADLDAAAESL  246 (452)
T ss_pred             CCCcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCceEEcC---CCCHHHHHHHH
Confidence             99999999999668899999997 99999999999999999999999999999999999999999   99999999999


Q ss_pred             HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCceee
Q 038617          240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIVH  317 (484)
Q Consensus       240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~  317 (484)
                      ++++|+ |+||.|++++++|||++++|+|+++|++++.++++|+| ++++++||++++.+.+++.++++++.. ++++++
T Consensus       247 ~~~~~~-~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~vl~  325 (452)
T cd07102         247 VDGAFF-NSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIADAIAKGARALI  325 (452)
T ss_pred             HHHHHH-hCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEe
Confidence            999999 99999999999999999999999999999999999999 888999999999999999999998864 678999


Q ss_pred             CCCc----CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcc
Q 038617          318 GGLL----DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGT  393 (484)
Q Consensus       318 gg~~----~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l  393 (484)
                      ||..    +..|+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++
T Consensus       326 gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l  405 (452)
T cd07102         326 DGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAEALGEQL  405 (452)
T ss_pred             CCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHHc
Confidence            9864    236899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617          394 SSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM  441 (484)
Q Consensus       394 ~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~  441 (484)
                      ++|+|+||++..  ..+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus       406 ~~G~v~iN~~~~--~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~~~  451 (452)
T cd07102         406 ETGTVFMNRCDY--LDPALAWTGVKDSGRGVTLSRLGYDQLTRPKSYH  451 (452)
T ss_pred             CcceEEECCCCC--CCCCCCCCCccccccCccchHHHHHHHhceeEEe
Confidence            999999998764  4577899999999999999999999999999875


No 70 
>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like. Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.
Probab=100.00  E-value=2.6e-89  Score=718.01  Aligned_cols=433  Identities=24%  Similarity=0.394  Sum_probs=401.8

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++++++|++|++.|++++.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.+++++..
T Consensus        33 ~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~-ev~~~i~~~~~~~~~  111 (478)
T cd07131          33 LSTASDVDAAVEAAREAFPEWRKVPAPRRAEYLFRAAELLKKRKEELARLVTREMGKPLAEGRG-DVQEAIDMAQYAAGE  111 (478)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999999999999999999999999999974 999999999999888


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      .+...... .  .....+...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus       112 ~~~~~~~~-~--~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~a  188 (478)
T cd07131         112 GRRLFGET-V--PSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACALKLVELFAEA  188 (478)
T ss_pred             HHHhCCcc-c--ccCCCCceEEEEeeceeEEEEECCcCcHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHhc
Confidence            77643221 1  11112235678999999999999999999999999999999999999999999999999999999999


Q ss_pred             -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617          162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR  238 (484)
Q Consensus       162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~  238 (484)
                       +|+|++|+++| +.+.+..|++|+ +|.|+||||+.+|+.|++.++++++|+++|+|||||+||++   |||++.|++.
T Consensus       189 GlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~---dADl~~Aa~~  265 (478)
T cd07131         189 GLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARPNKRVALEMGGKNPIIVMD---DADLDLALEG  265 (478)
T ss_pred             CcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCeEEECC---CCCHHHHHHH
Confidence             99999999999 556889999997 99999999999999999999999999999999999999999   9999999999


Q ss_pred             HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617          239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV  316 (484)
Q Consensus       239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~  316 (484)
                      +++++|. |+||.|+++++||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ |++++
T Consensus       266 i~~~~~~-~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~  344 (478)
T cd07131         266 ALWSAFG-TTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLL  344 (478)
T ss_pred             HHHHHHh-cCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCCCCCCCcCCcCCCHHHHHHHHHHHHHHHHCCCEEE
Confidence            9999999 99999999999999999999999999999999999999 888999999999999999999999874 77899


Q ss_pred             eCCCcC-----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh
Q 038617          317 HGGLLD-----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS  391 (484)
Q Consensus       317 ~gg~~~-----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~  391 (484)
                      +||...     .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++
T Consensus       345 ~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~  424 (478)
T cd07131         345 LGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDVNKAFRARR  424 (478)
T ss_pred             eCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHH
Confidence            998652     358999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccceeeEEECCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEe
Q 038617          392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIG-RYHGHYSFETFSHEKAIMQR  443 (484)
Q Consensus       392 ~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~  443 (484)
                      ++++|+|+||+++.+ ..+.+||||+|.||+| +++|.+|+++||+.|+|+++
T Consensus       425 ~l~~G~v~iN~~~~~-~~~~~pfgG~k~SG~G~~~~g~~~~~~f~~~k~i~~~  476 (478)
T cd07131         425 DLEAGITYVNAPTIG-AEVHLPFGGVKKSGNGHREAGTTALDAFTEWKAVYVD  476 (478)
T ss_pred             hcCccEEEECCCCCC-CCCCCCCCCcccccCCCcCCcHHHHHHhhheEEEEEe
Confidence            999999999987654 4578999999999999 77899999999999999764


No 71 
>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins. ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co
Probab=100.00  E-value=2.1e-89  Score=717.98  Aligned_cols=430  Identities=29%  Similarity=0.413  Sum_probs=399.4

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcC--CCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGI--TKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL   79 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~--~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~   79 (484)
                      .++.+|++.++++|++|+++|+  +++.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.+++++
T Consensus        37 ~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a  116 (476)
T cd07091          37 EADEEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYA  116 (476)
T ss_pred             CCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence            4788999999999999999855  99999999999999999999999999999999999987776669999999999998


Q ss_pred             HHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617           80 SCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP  159 (484)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~  159 (484)
                      ...++..+.. .  . ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.
T Consensus       117 ~~~~~~~~~~-~--~-~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL~aGN~VvlKps~~~p~~~~~l~~~~~  192 (476)
T cd07091         117 GWADKIQGKT-I--P-IDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLSALYLAELIK  192 (476)
T ss_pred             HHHHHhcCcc-c--c-CCCCceEEEEEeceeEEEEECCCcCHHHHHHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHH
Confidence            7766543321 1  1 1123456789999999999999999999999999999999999999999999999999999999


Q ss_pred             cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhc-ccCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617          160 LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAK-HLTPVTLELGGKCPAILDTLSSPLDIKVT  235 (484)
Q Consensus       160 ~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~-~~~~~~lelgG~~p~iV~~~~~daDl~~a  235 (484)
                      ++ +|+|++|+++| +.+.++.|+.|+ +|.|+||||+.+|+.|++.++. +++|+++|+|||||+||++   |||++.|
T Consensus       193 ~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~~~~~lElgG~~~~iV~~---dADl~~A  269 (476)
T cd07091         193 EAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAKSNLKKVTLELGGKSPNIVFD---DADLDKA  269 (476)
T ss_pred             HcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCceEEEecCCCCeEEECC---CCCHHHH
Confidence            99 99999999998 567888999987 9999999999999999999987 8899999999999999999   9999999


Q ss_pred             HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CC
Q 038617          236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-AD  313 (484)
Q Consensus       236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~  313 (484)
                      ++.+++++|. |+||.|+++++||||++++|+|+++|++++.++++|+| ++++++||++++.+++++.++++++.. |+
T Consensus       270 a~~i~~~~~~-~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga  348 (476)
T cd07091         270 VEWAAFGIFF-NQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGA  348 (476)
T ss_pred             HHHHHHHHHh-ccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCC
Confidence            9999999999 99999999999999999999999999999999999999 889999999999999999999998874 67


Q ss_pred             ceeeCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617          314 AIVHGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG  392 (484)
Q Consensus       314 ~~~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~  392 (484)
                      ++++||..+ ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+++++++
T Consensus       349 ~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~v~t~d~~~~~~~~~~  428 (476)
T cd07091         349 TLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFTKDINKALRVSRA  428 (476)
T ss_pred             EEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHh
Confidence            999998764 4689999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617          393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM  441 (484)
Q Consensus       393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~  441 (484)
                      +++|+|+||+...  ..+.+||||+|.||+|+++|.+|+++||+.|+++
T Consensus       429 l~~g~v~iN~~~~--~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~  475 (476)
T cd07091         429 LKAGTVWVNTYNV--FDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAVT  475 (476)
T ss_pred             cCcceEEECCCCC--CCCCCCcCCcccCcCCccchHHHHHHhhceeEEe
Confidence            9999999998654  5678999999999999999999999999999875


No 72 
>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like. NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of  Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.
Probab=100.00  E-value=2.1e-89  Score=714.38  Aligned_cols=430  Identities=26%  Similarity=0.374  Sum_probs=401.1

Q ss_pred             CCCHHHHHHHHHHHHHHhH--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFR--SGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL   79 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~   79 (484)
                      .++.+|++++++.|++||+  .|+++|.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.+++++
T Consensus        20 ~~~~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~   99 (462)
T cd07112          20 ACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPISDALAVDVPSAANTFRWYA   99 (462)
T ss_pred             CCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHH
Confidence            4788999999999999998  49999999999999999999999999999999999999999987569999999999999


Q ss_pred             HHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617           80 SCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP  159 (484)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~  159 (484)
                      ...+++.+...   + ...+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.
T Consensus       100 ~~~~~~~~~~~---~-~~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~  175 (462)
T cd07112         100 EAIDKVYGEVA---P-TGPDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELAL  175 (462)
T ss_pred             HHHHHhcCcee---c-CCCCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCCCCCCHHHHHHHHHHH
Confidence            99887654321   1 1123456789999999999999999999999999999999999999999999999999999999


Q ss_pred             cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHh-cccCceeeecCCcCceEEcCCCCCC-CHHH
Q 038617          160 LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAA-KHLTPVTLELGGKCPAILDTLSSPL-DIKV  234 (484)
Q Consensus       160 ~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~-~~~~~~~lelgG~~p~iV~~~~~da-Dl~~  234 (484)
                      ++ +|+|++|+++| +.+.++.|++|+ +|.|.||||+.+|+.|++.++ .++||+++|+||+||+||++   |+ |++.
T Consensus       176 ~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~lelgG~n~~iV~~---da~dl~~  252 (462)
T cd07112         176 EAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSPNIVFA---DAPDLDA  252 (462)
T ss_pred             hcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEecCCCCCeEEECC---CCcCHHH
Confidence            99 99999999999 567889999987 999999999999999999888 48999999999999999999   99 9999


Q ss_pred             HHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchh-cC
Q 038617          235 TVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPL-VA  312 (484)
Q Consensus       235 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~-~~  312 (484)
                      |++.+++++|. |+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+++++.++|+++. .|
T Consensus       253 aa~~i~~~~~~-~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~G  331 (462)
T cd07112         253 AAEAAAAGIFW-NQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDKVLGYIESGKAEG  331 (462)
T ss_pred             HHHHHHHHHHh-ccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCC
Confidence            99999999999 99999999999999999999999999999999999999 88999999999999999999999987 47


Q ss_pred             CceeeCCCcCC---CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 038617          313 DAIVHGGLLDK---ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQI  389 (484)
Q Consensus       313 ~~~~~gg~~~~---~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~  389 (484)
                      +++++||....   +|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+.++
T Consensus       332 a~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~  411 (462)
T cd07112         332 ARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLSRAHRV  411 (462)
T ss_pred             CEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEEEEcCCHHHHHHH
Confidence            78999986532   588999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617          390 VSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM  441 (484)
Q Consensus       390 ~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~  441 (484)
                      ++++++|+|+||+...  ..+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus       412 ~~~l~~g~v~iN~~~~--~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~i~  461 (462)
T cd07112         412 ARRLRAGTVWVNCFDE--GDITTPFGGFKQSGNGRDKSLHALDKYTELKTTW  461 (462)
T ss_pred             HHhcCcceEEECCCCC--CCCCCCCCCcccccCCccchHHHHHHHhceeEEE
Confidence            9999999999998654  4678999999999999999999999999999875


No 73 
>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.
Probab=100.00  E-value=2e-89  Score=716.27  Aligned_cols=425  Identities=29%  Similarity=0.435  Sum_probs=398.3

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++++++|++|++.|+++|.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.++++++.
T Consensus        32 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~  111 (466)
T cd07138          32 LGTAADVDRAVAAARRAFPAWSATSVEERAALLERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAADA  111 (466)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            47889999999999999999999999999999999999999999999999999999999988756999999999999988


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      .+.+....        .....+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.+++.++
T Consensus       112 ~~~~~~~~--------~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~a  183 (466)
T cd07138         112 LKDFEFEE--------RRGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAIILAEILDEA  183 (466)
T ss_pred             hhhccccc--------cCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHHHc
Confidence            76653321        1224567899999999999999999999999999999999999999999999999999999999


Q ss_pred             -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617          162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR  238 (484)
Q Consensus       162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~  238 (484)
                       +|+|++|+++| +.+.++.|++|+ +|.|.||||+.+|+.|.+.++.+++|+++|+|||||+||++   |||++.|++.
T Consensus       184 GlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~v~lElgG~~p~iV~~---dADl~~aa~~  260 (466)
T cd07138         184 GLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAADTVKRVALELGGKSANIILD---DADLEKAVPR  260 (466)
T ss_pred             CCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCeEEEECCCCCeeEECC---CCCHHHHHHH
Confidence             99999999998 456889999998 99999999999999999999999999999999999999999   9999999999


Q ss_pred             HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617          239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV  316 (484)
Q Consensus       239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~  316 (484)
                      +++++|. |+||.|+++++||||++++|+|++.|++++.++++||| ++++++||++++.+.+++.++++++.+ |++++
T Consensus       261 i~~~~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~v~~a~~~Ga~~l  339 (466)
T cd07138         261 GVAACFA-NSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLV  339 (466)
T ss_pred             HHHHHHh-ccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCCccCCHHHHHHHHHHHHHHHHCCCEEE
Confidence            9999999 99999999999999999999999999999999999999 889999999999999999999998864 77899


Q ss_pred             eCCCcC----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617          317 HGGLLD----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG  392 (484)
Q Consensus       317 ~gg~~~----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~  392 (484)
                      +||...    ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+.+++++
T Consensus       340 ~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~a~~~~~~  419 (466)
T cd07138         340 AGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSADPERARAVARR  419 (466)
T ss_pred             eCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHh
Confidence            998632    2589999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617          393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM  441 (484)
Q Consensus       393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~  441 (484)
                      +++|+|+||+..   ..+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus       420 l~~G~v~iN~~~---~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~  465 (466)
T cd07138         420 LRAGQVHINGAA---FNPGAPFGGYKQSGNGREWGRYGLEEFLEVKSIQ  465 (466)
T ss_pred             cCcceEEECCCC---CCCCCCcCCcccccCCccchHHHHHHhcceeEEe
Confidence            999999999853   3678999999999999999999999999999874


No 74 
>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like. Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related  sequences are included in this CD.  The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+  and exhibited a broad substrate preference, including vanillin,  benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.
Probab=100.00  E-value=2.4e-89  Score=714.13  Aligned_cols=429  Identities=27%  Similarity=0.397  Sum_probs=400.5

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++++++|++|++.|++++.++|.++|+++++.|++++++|+++++.|+|||..++.. |+..+++.+++++..
T Consensus        17 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~   95 (451)
T cd07150          17 VGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYGKAWF-ETTFTPELLRAAAGE   95 (451)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence            4788999999999999999999999999999999999999999999999999999999999875 999999999999888


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      .+++.....   +....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.+++.++
T Consensus        96 ~~~~~~~~~---~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~t~~~l~~~~~~a  172 (451)
T cd07150          96 CRRVRGETL---PSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEA  172 (451)
T ss_pred             HHHhcCccc---cCCCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCccCcHHHHHHHHHHHHh
Confidence            766532211   11112345678999999999999999999999999999999999999999999999999999999998


Q ss_pred             -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617          162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR  238 (484)
Q Consensus       162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~  238 (484)
                       +|+|++|+++| +.+.+..|+.|+ +|+|.||||+.+|+.|++.++++++|+++|+|||||+||++   |||++.|++.
T Consensus       173 g~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~lelGG~~~~iV~~---dadl~~aa~~  249 (451)
T cd07150         173 GLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLELGGKNPLIVLA---DADLDYAVRA  249 (451)
T ss_pred             CCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEECC---CCChHHHHHH
Confidence             99999999998 567889999987 99999999999999999999999999999999999999999   9999999999


Q ss_pred             HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617          239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV  316 (484)
Q Consensus       239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~  316 (484)
                      +++++|. |+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+.+++.++++++.. |++++
T Consensus       250 i~~~~~~-~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl  328 (451)
T cd07150         250 AAFGAFM-HQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDAVAKGAKLL  328 (451)
T ss_pred             HHHHHHh-hcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEE
Confidence            9999999 99999999999999999999999999999999999999 788999999999999999999999864 67899


Q ss_pred             eCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcccee
Q 038617          317 HGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSG  396 (484)
Q Consensus       317 ~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g  396 (484)
                      +||..  +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|
T Consensus       329 ~gg~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G  406 (451)
T cd07150         329 TGGKY--DGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLAERLESG  406 (451)
T ss_pred             eCCcc--CCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCcC
Confidence            98864  4899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617          397 SLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM  441 (484)
Q Consensus       397 ~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~  441 (484)
                      +|+||+++.+ ..+.+||||+|.||+|+++|.+++++||+.|+++
T Consensus       407 ~v~iN~~~~~-~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~v~  450 (451)
T cd07150         407 MVHINDPTIL-DEAHVPFGGVKASGFGREGGEWSMEEFTELKWIT  450 (451)
T ss_pred             EEEECCCCCC-CCCCCCcCCccccccCcCCcHHHHHHhheeeEEe
Confidence            9999998754 4578999999999999999999999999999885


No 75 
>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like. Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.
Probab=100.00  E-value=6.4e-89  Score=704.13  Aligned_cols=428  Identities=43%  Similarity=0.737  Sum_probs=397.7

Q ss_pred             HHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHhhcCc
Q 038617           10 DKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPK   89 (484)
Q Consensus        10 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~   89 (484)
                      +++++|++||+.|+++|.++|.++|.+++++|++++++|+++++.|+||+..++...|+..+++.+++++.....+....
T Consensus         2 ~~~~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~   81 (433)
T cd07134           2 RVFAAQQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMKPK   81 (433)
T ss_pred             hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            67899999999999999999999999999999999999999999999999999875699999999999998877665543


Q ss_pred             cccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccccCccceee
Q 038617           90 KRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKV  169 (484)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~alp~g~v~~  169 (484)
                      ....+....+...+++++|+|||++|+|||||++++++++++||++||+||+|||+.+|.++..+.+++.+++|+|++++
T Consensus        82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a~p~g~v~~  161 (433)
T cd07134          82 RVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREAFDEDEVAV  161 (433)
T ss_pred             ccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHhCCcCEEEE
Confidence            22111112244568999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHhhcccCCC
Q 038617          170 TNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNG  249 (484)
Q Consensus       170 v~g~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~~~~~~~G  249 (484)
                      ++|+.+.+..|++|++|.|.||||+.+|+.|++.++++++|+++|+|||||+||++   |||++.|++.+++++|. ++|
T Consensus       162 v~g~~~~~~~l~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~---dAD~~~aa~~i~~~~~~-~~G  237 (433)
T cd07134         162 FEGDAEVAQALLELPFDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDE---TADLKKAAKKIAWGKFL-NAG  237 (433)
T ss_pred             EeCChhHHHHHHhCCCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEECC---CCCHHHHHHHHHHHhhc-CcC
Confidence            99987888999999999999999999999999999999999999999999999999   99999999999999999 999


Q ss_pred             CccccCCceEEccchHHHHHHHHHHHHHhhcCCCC--CCCCccccccCHHHHHHHHHHhhchh-cCCceeeCCCcCCCCC
Q 038617          250 QVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP--KDSKSISRIINEYHFERLRKLLKDPL-VADAIVHGGLLDKENL  326 (484)
Q Consensus       250 q~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~--~~~~~~gpli~~~~~~~~~~~i~~a~-~~~~~~~gg~~~~~g~  326 (484)
                      |.|++++++|||++++|+|+++|+++++++.+++|  +.++++||++++.+.+++.++++++. +++++++||..+.+|+
T Consensus       238 Q~C~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~~~g~  317 (433)
T cd07134         238 QTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFDAAQR  317 (433)
T ss_pred             CcccCCcEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCC
Confidence            99999999999999999999999999999988874  77889999999999999999999986 4789999997766689


Q ss_pred             eeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEEECCCccc
Q 038617          327 FIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQ  406 (484)
Q Consensus       327 ~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~  406 (484)
                      |++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||+.+.+
T Consensus       318 ~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~  397 (433)
T cd07134         318 YIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVLH  397 (433)
T ss_pred             EEeeEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999987765


Q ss_pred             cCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617          407 QLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM  441 (484)
Q Consensus       407 ~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~  441 (484)
                      ...+.+||||+|.||+|+++|.+++++||+.|++.
T Consensus       398 ~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~  432 (433)
T cd07134         398 FLNPNLPFGGVNNSGIGSYHGVYGFKAFSHERAVL  432 (433)
T ss_pred             cCCCCCCCCCcCcccCCCcCcHHHHHHhcccceee
Confidence            45678999999999999999999999999999874


No 76 
>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like. Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.
Probab=100.00  E-value=7.7e-89  Score=713.08  Aligned_cols=430  Identities=25%  Similarity=0.390  Sum_probs=399.4

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++++++|++|++.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++. |+..+++.+++++..
T Consensus        31 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~  109 (468)
T cd07088          31 AATAEDADRAVDAAEAAQKAWERLPAIERAAYLRKLADLIRENADELAKLIVEEQGKTLSLARV-EVEFTADYIDYMAEW  109 (468)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence            4788999999999999999999999999999999999999999999999999999999999974 999999999999887


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      .++..+..   .+....+...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus       110 a~~~~~~~---~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VVlKps~~~p~~~~~l~~~~~~a  186 (468)
T cd07088         110 ARRIEGEI---IPSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALEFAELVDEA  186 (468)
T ss_pred             HHHhCCcc---ccCccccceeEEEEecceeEEEEccCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHc
Confidence            76543221   111112345678899999999999999999999999999999999999999999999999999999998


Q ss_pred             -cCccceeeccCC-hhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617          162 -LDCKAIKVTNGG-VDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR  238 (484)
Q Consensus       162 -lp~g~v~~v~g~-~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~  238 (484)
                       +|+|++|+++|+ .+.++.|++|+ +|+|.||||+.+|+.|++.++++++|+++|+|||||+||++   |||++.|++.
T Consensus       187 glP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~lelGG~~~~iV~~---dadl~~aa~~  263 (468)
T cd07088         187 GLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAENITKVSLELGGKAPAIVMK---DADLDLAVKA  263 (468)
T ss_pred             CcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCeEEECC---CCCHHHHHHH
Confidence             999999999994 45788999997 99999999999999999999999999999999999999999   9999999999


Q ss_pred             HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617          239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV  316 (484)
Q Consensus       239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~  316 (484)
                      +++++|. |+||.|+++++||||++++|+|+++|+++++++++|+| ++++.+||++++.+++++.++++++.+ +++++
T Consensus       264 iv~~~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl  342 (468)
T cd07088         264 IVDSRII-NCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLL  342 (468)
T ss_pred             HHHHHhc-ccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEE
Confidence            9999999 99999999999999999999999999999999999999 888999999999999999999999864 78999


Q ss_pred             eCCCcC--CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccc
Q 038617          317 HGGLLD--KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTS  394 (484)
Q Consensus       317 ~gg~~~--~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~  394 (484)
                      +||..+  ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+++++++++
T Consensus       343 ~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~  422 (468)
T cd07088         343 TGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMRATNELE  422 (468)
T ss_pred             eCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCC
Confidence            999754  368999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617          395 SGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM  441 (484)
Q Consensus       395 ~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~  441 (484)
                      +|+|+||++..+  ....||||+|.||+|+++|++|+++||+.|+++
T Consensus       423 ~g~v~iN~~~~~--~~~~p~gG~k~SG~G~~~g~~~l~~~t~~k~v~  467 (468)
T cd07088         423 FGETYINRENFE--AMQGFHAGWKKSGLGGADGKHGLEEYLQTKVVY  467 (468)
T ss_pred             cceEEECCCCCC--CCCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence            999999987753  345699999999999999999999999999885


No 77 
>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like. Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.
Probab=100.00  E-value=6.1e-89  Score=710.84  Aligned_cols=431  Identities=26%  Similarity=0.382  Sum_probs=398.1

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++++++|++|++.|+++|.++|.++|++++++|++++++|++++++|+|||..++.. |+..++..+++++..
T Consensus        17 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~   95 (452)
T cd07147          17 LAGPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDARG-EVARAIDTFRIAAEE   95 (452)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence            4788999999999999999999999999999999999999999999999999999999999975 999999999999988


Q ss_pred             HHHhhcCccc-cCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhcc
Q 038617           82 LDKWMAPKKR-RLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPL  160 (484)
Q Consensus        82 ~~~~~~~~~~-~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~  160 (484)
                      +.++.+.... .......+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..|++++.+
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~l~~  175 (452)
T cd07147          96 ATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAE  175 (452)
T ss_pred             HHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHH
Confidence            8766432211 011111233567889999999999999999999999999999999999999999999999999999999


Q ss_pred             c-cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617          161 Y-LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR  238 (484)
Q Consensus       161 a-lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~  238 (484)
                      + +|+|++|+++|+.+.+..|+.|+ +|.|+||||+.+|+.|.+.++.  +|+++|+|||||+||++   |||++.|++.
T Consensus       176 ag~P~g~v~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~~--~~v~lelgG~~p~iV~~---dadl~~aa~~  250 (452)
T cd07147         176 TGLPKGAFSVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARAGK--KKVVLELGGNAAVIVDS---DADLDFAAQR  250 (452)
T ss_pred             cCCCcCcEEEEeCCccchhHHhcCCCCCEEEEECCHHHHHHHHHHhCc--CceEeecCCCCcEEECC---CCCHHHHHHH
Confidence            8 99999999999777889999887 9999999999999999998763  79999999999999999   9999999999


Q ss_pred             HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617          239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV  316 (484)
Q Consensus       239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~  316 (484)
                      +++++|. |+||.|+++++||||++++|+|+++|++++.++++|+| ++++.+||++++.+++++.++++++.+ |++++
T Consensus       251 i~~~~~~-~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l  329 (452)
T cd07147         251 IIFGAFY-QAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERVEGWVNEAVDAGAKLL  329 (452)
T ss_pred             HHHHHHh-ccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEE
Confidence            9999999 99999999999999999999999999999999999999 888999999999999999999999864 67899


Q ss_pred             eCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcccee
Q 038617          317 HGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSG  396 (484)
Q Consensus       317 ~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g  396 (484)
                      +||..  +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|
T Consensus       330 ~gg~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~a~~~~~~~~~G  407 (452)
T cd07147         330 TGGKR--DGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVG  407 (452)
T ss_pred             ecCCc--CCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHcCcc
Confidence            99865  4889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEE
Q 038617          397 SLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQ  442 (484)
Q Consensus       397 ~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~  442 (484)
                      +|+||+.+.. ..+.+||||+|.||+|+++|.+|+++|++.|+|++
T Consensus       408 ~v~vN~~~~~-~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~i~~  452 (452)
T cd07147         408 GVVINDVPTF-RVDHMPYGGVKDSGIGREGVRYAIEEMTEPRLLVI  452 (452)
T ss_pred             eEEECCCCCC-CCCCCCcCCccccccCCCChHHHHHHhcceeEEeC
Confidence            9999987642 35679999999999999999999999999999864


No 78 
>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed
Probab=100.00  E-value=8.2e-89  Score=713.28  Aligned_cols=431  Identities=23%  Similarity=0.332  Sum_probs=396.6

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++++|+|||..+++. |+..+++.++++++.
T Consensus        33 ~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~  111 (487)
T PRK09457         33 DATAAQVDAAVRAARAAFPAWARLSFEERQAIVERFAALLEENKEELAEVIARETGKPLWEAAT-EVTAMINKIAISIQA  111 (487)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence            4788999999999999999999999999999999999999999999999999999999999974 999999999998888


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      +.++.++..   . ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus       112 ~~~~~~~~~---~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKPs~~tp~t~~~l~~l~~~a  187 (487)
T PRK09457        112 YHERTGEKR---S-EMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAELTVKLWQQA  187 (487)
T ss_pred             HHHhcCcee---c-cCCCceeEEEEeccEEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHh
Confidence            776654322   1 112345688999999999999999999999999999999999999999999999999999999999


Q ss_pred             -cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcc-cCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617          162 -LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKH-LTPVTLELGGKCPAILDTLSSPLDIKVTVKR  238 (484)
Q Consensus       162 -lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~-~~~~~lelgG~~p~iV~~~~~daDl~~aa~~  238 (484)
                       +|+|++|+++|+.+.++.|++|+ +|.|+||||+++|+.|++.++.+ .+++++|+|||||+||++   |||++.|++.
T Consensus       188 GlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~~lElGGk~p~IV~~---dADl~~aa~~  264 (487)
T PRK09457        188 GLPAGVLNLVQGGRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQPEKILALEMGGNNPLVIDE---VADIDAAVHL  264 (487)
T ss_pred             CcCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcCCCcEEEecCCCCeEEECC---CCCHHHHHHH
Confidence             99999999999878899999997 99999999999999999987755 578899999999999999   9999999999


Q ss_pred             HHHhhcccCCCCccccCCceEEccchH-HHHHHHHHHHHHhhcCCCC--CCCCccccccCHHHHHHHHHHhhchhc-CCc
Q 038617          239 IIGGKFASCNGQVCVGVDYILVEKKFA-ATLIESLKTTIKKFYGENP--KDSKSISRIINEYHFERLRKLLKDPLV-ADA  314 (484)
Q Consensus       239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~~--~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~  314 (484)
                      +++++|. |+||.|++++|||||+++| |+|+++|+++++++++|+|  ++++++||++++.+++++.++++++.+ |++
T Consensus       265 i~~~~f~-~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~  343 (487)
T PRK09457        265 IIQSAFI-SAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWDAEPQPFMGAVISEQAAQGLVAAQAQLLALGGK  343 (487)
T ss_pred             HHHHHhh-ccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCCCCcCCCCccCCCcCHHHHHHHHHHHHHHHHCCCE
Confidence            9999999 9999999999999999998 9999999999999999998  467899999999999999999999875 788


Q ss_pred             eeeCCCc-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcc
Q 038617          315 IVHGGLL-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGT  393 (484)
Q Consensus       315 ~~~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l  393 (484)
                      +++||.. +.+|+|++|||+ +++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++
T Consensus       344 ~~~gg~~~~~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l  422 (487)
T PRK09457        344 SLLEMTQLQAGTGLLTPGII-DVTGVAELPDEEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDREDYDQFLLEI  422 (487)
T ss_pred             EEeCCCccCCCCeeEecEEe-ccCCCChHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhC
Confidence            8888754 345799999999 79999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617          394 SSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS  444 (484)
Q Consensus       394 ~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~  444 (484)
                      ++|+|+||+...+ ..+.+||||+|.||+|+++|..+ .+|++.|+++.+.
T Consensus       423 ~~G~v~iN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~-~~~~~~k~~~~~~  471 (487)
T PRK09457        423 RAGIVNWNKPLTG-ASSAAPFGGVGASGNHRPSAYYA-ADYCAYPMASLES  471 (487)
T ss_pred             CcceEEEECCCCC-CCCCCCCCCcccccCCCCCchhH-hhheeeeEEEEec
Confidence            9999999987654 45679999999999999999555 5599999988774


No 79 
>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like. NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.
Probab=100.00  E-value=1.2e-88  Score=708.51  Aligned_cols=431  Identities=26%  Similarity=0.378  Sum_probs=400.3

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|++++++.|++|++.|++++.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.+++++..
T Consensus        15 ~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~i~~~~~~~~~   94 (450)
T cd07092          15 DASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRDDELPGAVDNFRFFAGA   94 (450)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence            47889999999999999999999999999999999999999999999999999999999877656999999999999877


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      .+.+.+....   ....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|.++|.+.
T Consensus        95 ~~~~~~~~~~---~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~~~l~~~~~~g  171 (450)
T cd07092          95 ARTLEGPAAG---EYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAAEV  171 (450)
T ss_pred             HHHhcCcccC---ccCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHhc
Confidence            6654322110   1112335678999999999999999999999999999999999999999999999999999999889


Q ss_pred             cCccceeeccCC-hhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617          162 LDCKAIKVTNGG-VDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI  239 (484)
Q Consensus       162 lp~g~v~~v~g~-~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i  239 (484)
                      +|+|++|+++|+ .+.++.|++|+ +|.|+||||+.+|+.|++.++++++|+++|+|||||+||++   |||++.|++.+
T Consensus       172 lP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~~~lelgG~~p~iV~~---dAdl~~aa~~i  248 (450)
T cd07092         172 LPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLKRVHLELGGKAPVIVFD---DADLDAAVAGI  248 (450)
T ss_pred             CCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCeeEECC---CCCHHHHHHHH
Confidence            999999999984 45889999997 99999999999999999999999999999999999999999   99999999999


Q ss_pred             HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhcCCceeeC
Q 038617          240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLVADAIVHG  318 (484)
Q Consensus       240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~g  318 (484)
                      ++++|. |+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+.+++.++++++.+++++++|
T Consensus       249 v~~~~~-~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~~~i~~a~~ga~~~~g  327 (450)
T cd07092         249 ATAGYY-NAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVERAPAHARVLTG  327 (450)
T ss_pred             HHHHHh-hCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHcCCEEEeC
Confidence            999999 99999999999999999999999999999999999999 8889999999999999999999988777899999


Q ss_pred             CCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceee
Q 038617          319 GLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGS  397 (484)
Q Consensus       319 g~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~  397 (484)
                      |... ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+
T Consensus       328 g~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~g~  407 (450)
T cd07092         328 GRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMRLSARLDFGT  407 (450)
T ss_pred             CCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCccE
Confidence            9753 368999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617          398 LIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM  441 (484)
Q Consensus       398 v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~  441 (484)
                      |+||+...  ..+.+||||+|.||+|+++|++++++|++.|++.
T Consensus       408 v~iN~~~~--~~~~~PfgG~~~SG~G~~~g~~~~~~~~~~k~~~  449 (450)
T cd07092         408 VWVNTHIP--LAAEMPHGGFKQSGYGKDLSIYALEDYTRIKHVM  449 (450)
T ss_pred             EEECCCCC--CCCCCCcCCcccCcCCCCChHHHHHHHheeeEEe
Confidence            99998765  3678999999999999999999999999999874


No 80 
>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like. NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.
Probab=100.00  E-value=8.4e-89  Score=710.32  Aligned_cols=429  Identities=27%  Similarity=0.391  Sum_probs=396.6

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCCh-hhhhHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHP-VETYRDEIGLIKKSAKYALS   80 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~-~ea~~~ev~~~~~~~~~~~~   80 (484)
                      .++.+|+++++++|++||+.|++++.++|.++|++++++|++++++|++++++|+||+. .+++ .|+..+++.+++++.
T Consensus        15 ~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a~-~ev~~~~~~~~~~~~   93 (457)
T cd07108          15 RSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEELARLLALETGNALRTQAR-PEAAVLADLFRYFGG   93 (457)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHHH-HHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999999999999999999999997 5776 599999999998887


Q ss_pred             HHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhcc
Q 038617           81 CLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPL  160 (484)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~  160 (484)
                      ....+. +....   ...+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.+++.+
T Consensus        94 ~~~~~~-~~~~~---~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~  169 (457)
T cd07108          94 LAGELK-GETLP---FGPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQ  169 (457)
T ss_pred             HHHHhC-Cceec---cCCCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHH
Confidence            665432 22111   11233457889999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617          161 YLDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR  238 (484)
Q Consensus       161 alp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~  238 (484)
                      ++|+|++|+++| +.+.++.|++|+ +|.|+||||+.+|+.|++.++++++|+++|+|||||+||++   |||++.|++.
T Consensus       170 ~lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~~l~~~~lelgG~~~~iV~~---dAdl~~Aa~~  246 (457)
T cd07108         170 VLPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSPMIVFP---DADLDDAVDG  246 (457)
T ss_pred             hCCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhccCCeEEEECCCCCeeEECC---CCCHHHHHHH
Confidence            999999999998 567889999997 99999999999999999999999999999999999999999   9999999999


Q ss_pred             HHHhh-cccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc--CCc
Q 038617          239 IIGGK-FASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV--ADA  314 (484)
Q Consensus       239 i~~~~-~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~--~~~  314 (484)
                      +++++ |. |+||.|+++++||||++++|+|+++|++++.++++|+| ++++++||++++.+++++.++++++.+  +++
T Consensus       247 iv~~~~f~-~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~~ga~  325 (457)
T cd07108         247 AIAGMRFT-RQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYIDLGLSTSGAT  325 (457)
T ss_pred             HHHhhHhh-cCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCCE
Confidence            99995 99 99999999999999999999999999999999999999 888999999999999999999998854  789


Q ss_pred             eeeCCCcC-----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 038617          315 IVHGGLLD-----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQI  389 (484)
Q Consensus       315 ~~~gg~~~-----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~  389 (484)
                      +++||..+     ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++
T Consensus       326 vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft~d~~~a~~~  405 (457)
T cd07108         326 VLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGRALRA  405 (457)
T ss_pred             EEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHHHHHHHHhCCCcCceeEEEcCCHHHHHHH
Confidence            99998753     3589999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHH-HHHhhhccEEE
Q 038617          390 VSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYS-FETFSHEKAIM  441 (484)
Q Consensus       390 ~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~-~~~f~~~k~v~  441 (484)
                      ++++++|.|+||++..  ..+.+||||+|.||+|+++|.++ +++||+.|+++
T Consensus       406 ~~~l~~g~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~~~~~f~~~k~i~  456 (457)
T cd07108         406 AHALEAGWVQVNQGGG--QQPGQSYGGFKQSGLGREASLEGMLEHFTQKKTVN  456 (457)
T ss_pred             HHhcCcceEEECCCCC--CCCCCCcCCcccCcCCCCccchhHHHHhhceEEEe
Confidence            9999999999999864  36789999999999999999977 69999999875


No 81 
>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins. ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.
Probab=100.00  E-value=1e-88  Score=709.38  Aligned_cols=431  Identities=27%  Similarity=0.398  Sum_probs=398.7

Q ss_pred             CCCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHH
Q 038617            1 MAAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALS   80 (484)
Q Consensus         1 ~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~   80 (484)
                      +.++.+|+++++++|++|++.|+++|.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.+++++.
T Consensus        16 ~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~   94 (453)
T cd07094          16 PADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDARV-EVDRAIDTLRLAAE   94 (453)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999999999999999999999999999974 99999999999999


Q ss_pred             HHHHhhcCccc-cCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617           81 CLDKWMAPKKR-RLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP  159 (484)
Q Consensus        81 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~  159 (484)
                      .++++.+.... .......+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kps~~~p~~~~~l~~~l~  174 (453)
T cd07094          95 EAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILV  174 (453)
T ss_pred             HHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHH
Confidence            88877532211 00000123356788999999999999999999999999999999999999999999999999999999


Q ss_pred             cc-cCccceeeccCC-hhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHH
Q 038617          160 LY-LDCKAIKVTNGG-VDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTV  236 (484)
Q Consensus       160 ~a-lp~g~v~~v~g~-~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa  236 (484)
                      ++ +|+|++|+++|+ .+.++.|++|+ +|.|+||||+++|+.|.+.+  +++|+++|+|||||+||++   |||++.|+
T Consensus       175 ~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a--~~~~~~lelGGk~~~iV~~---dadl~~aa  249 (453)
T cd07094         175 EAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANA--GGKRIALELGGNAPVIVDR---DADLDAAI  249 (453)
T ss_pred             HcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc--CCCceEEecCCCCceEECC---CCCHHHHH
Confidence            98 999999999994 56689999997 99999999999999999987  6799999999999999999   99999999


Q ss_pred             HHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCc
Q 038617          237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADA  314 (484)
Q Consensus       237 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~  314 (484)
                      +.+++++|. |+||.|+++++||||++++|+|+++|++++.++++|+| ++++++||++++.+++++.++++++.+ |++
T Consensus       250 ~~i~~~~~~-~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~  328 (453)
T cd07094         250 EALAKGGFY-HAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVERWVEEAVEAGAR  328 (453)
T ss_pred             HHHHHHHHH-hcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCE
Confidence            999999999 99999999999999999999999999999999999999 888999999999999999999999864 678


Q ss_pred             eeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccc
Q 038617          315 IVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTS  394 (484)
Q Consensus       315 ~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~  394 (484)
                      +++||..  +|+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||++||||+|.+++.+++++++
T Consensus       329 v~~gg~~--~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~a~~~~~~l~  406 (453)
T cd07094         329 LLCGGER--DGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLE  406 (453)
T ss_pred             EEeCccC--CCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeeEEECCCHHHHHHHHHhcC
Confidence            9998864  58899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617          395 SGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM  441 (484)
Q Consensus       395 ~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~  441 (484)
                      +|+|+||++... ..+.+||||+|.||+|+++|.+|+++|++.|+|+
T Consensus       407 ~g~v~iN~~~~~-~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~i~  452 (453)
T cd07094         407 VGGVMVNDSSAF-RTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVV  452 (453)
T ss_pred             cCeEEEcCCCCC-CCCCCCCCCccccccCcCChHHHHHHHhceeEEe
Confidence            999999998642 4578999999999999999999999999999985


No 82 
>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like. Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.
Probab=100.00  E-value=1.4e-88  Score=708.55  Aligned_cols=418  Identities=25%  Similarity=0.358  Sum_probs=391.2

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++++++|++|++.|+++|.++|.++|++++++|++++++|++++++|+|||..+++..|+..+++.++++...
T Consensus        55 ~a~~~~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~  134 (480)
T cd07111          55 QAEEEDVDAAVAAARTAFESWSALPGHVRARHLYRIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGW  134 (480)
T ss_pred             CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            47889999999999999999999999999999999999999999999999999999999998756898888888777655


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      .+...              .....++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|++++.++
T Consensus       135 ~~~~~--------------~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~a  200 (480)
T cd07111         135 AQLLD--------------TELAGWKPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAEA  200 (480)
T ss_pred             HHHhc--------------CCcccceecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHhc
Confidence            44221              1234589999999999999999999999999999999999999999999999999999999


Q ss_pred             -cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617          162 -LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI  239 (484)
Q Consensus       162 -lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i  239 (484)
                       +|+|++|+++|+.+.+..|++|+ +|.|+||||+.+|+.|.+.++++++|+++|+|||||+||++   |+|++.|++.+
T Consensus       201 GlP~gvv~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~v~~~aa~~~~~~~lElGGk~p~iV~~---daDl~~aa~~i  277 (480)
T cd07111         201 GLPPGVLNIVTGNGSFGSALANHPGVDKVAFTGSTEVGRALRRATAGTGKKLSLELGGKSPFIVFD---DADLDSAVEGI  277 (480)
T ss_pred             CCCcccEEEEeCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhccCCcEEEEcCCCceEEECC---CCCHHHHHHHH
Confidence             99999999999667889999998 99999999999999999999999999999999999999999   99999999999


Q ss_pred             HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCceee
Q 038617          240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIVH  317 (484)
Q Consensus       240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~  317 (484)
                      ++++|. |+||.|+++++||||++++|+|+++|++++.++++|+| ++++++||++++.+++++.++++++.. +++++.
T Consensus       278 ~~~~f~-~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~  356 (480)
T cd07111         278 VDAIWF-NQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQ  356 (480)
T ss_pred             HHHHHh-cCCCcCcCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccccccCHHHHHHHHHHHHHHHHCCCEEEe
Confidence            999999 99999999999999999999999999999999999999 889999999999999999999999864 678888


Q ss_pred             CCCc-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcccee
Q 038617          318 GGLL-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSG  396 (484)
Q Consensus       318 gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g  396 (484)
                      ||.. +..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+.++++++++|
T Consensus       357 gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~aG  436 (480)
T cd07111         357 PGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVALSLKAG  436 (480)
T ss_pred             CCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCEe
Confidence            8754 446899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccE
Q 038617          397 SLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKA  439 (484)
Q Consensus       397 ~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~  439 (484)
                      +|+||+...  ..+.+||||+|.||+|+++|.+|+++||+.|+
T Consensus       437 ~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~  477 (480)
T cd07111         437 VVWINGHNL--FDAAAGFGGYRESGFGREGGKEGLYEYLRPSW  477 (480)
T ss_pred             eEEECCCCC--CCCCCCcCCcccccCCccchHHHHHHHhhccC
Confidence            999998765  45678999999999999999999999999885


No 83 
>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like. N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
Probab=100.00  E-value=1.1e-88  Score=701.92  Aligned_cols=422  Identities=23%  Similarity=0.347  Sum_probs=390.6

Q ss_pred             HHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHhh
Q 038617            7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWM   86 (484)
Q Consensus         7 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~   86 (484)
                      |+++++++|++|++.|+++|.++|.++|++++++|++++++|++++++|+|||..++.. |+..++..+++++....++.
T Consensus         1 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~~~~~~~~~   79 (431)
T cd07095           1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQT-EVAAMAGKIDISIKAYHERT   79 (431)
T ss_pred             CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhc
Confidence            58999999999999999999999999999999999999999999999999999999974 99999999999998887775


Q ss_pred             cCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc-cCcc
Q 038617           87 APKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY-LDCK  165 (484)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a-lp~g  165 (484)
                      .....    ...+...+++++|+|||++|+|||||++++++++++||++||+||+|||+.+|.++..+.+++.++ +|+|
T Consensus        80 ~~~~~----~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~P~g  155 (431)
T cd07095          80 GERAT----PMAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPG  155 (431)
T ss_pred             CCccc----CCCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCcChh
Confidence            43321    112446788999999999999999999999999999999999999999999999999999999998 9999


Q ss_pred             ceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcc-cCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHhh
Q 038617          166 AIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKH-LTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGK  243 (484)
Q Consensus       166 ~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~-~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~~  243 (484)
                      ++|+++|+.+.+..|++|+ +|.|.||||+++|+.|++.++.+ ++++++|+|||||+||++   |||++.|++.+++++
T Consensus       156 ~~~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~---daDl~~aa~~i~~~~  232 (431)
T cd07095         156 VLNLVQGGRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWD---VADIDAAAYLIVQSA  232 (431)
T ss_pred             HheEEeCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECC---CCCHHHHHHHHHHHH
Confidence            9999999777889999998 99999999999999999987654 699999999999999999   999999999999999


Q ss_pred             cccCCCCccccCCceEEccc-hHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCceeeCCC
Q 038617          244 FASCNGQVCVGVDYILVEKK-FAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIVHGGL  320 (484)
Q Consensus       244 ~~~~~Gq~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~gg~  320 (484)
                      |. |+||.|+++++||||++ ++|+|+++|++++.++++|+| ++++.+||++++.+++++.++++++.+ |+++++||.
T Consensus       233 ~~-~~GQ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~  311 (431)
T cd07095         233 FL-TAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAME  311 (431)
T ss_pred             HH-hCCCCCCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCC
Confidence            99 99999999999999999 999999999999999999999 778999999999999999999999875 788999986


Q ss_pred             c-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEE
Q 038617          321 L-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLI  399 (484)
Q Consensus       321 ~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~  399 (484)
                      . +.+|+|++|||+ +++++|.+++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|+|+
T Consensus       312 ~~~~~g~~~~Ptv~-~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~~~l~~G~v~  390 (431)
T cd07095         312 RLVAGTAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVN  390 (431)
T ss_pred             cCCCCCeEEcCEEE-ecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEE
Confidence            4 346899999999 68999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 038617          400 FNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI  440 (484)
Q Consensus       400 iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v  440 (484)
                      ||++... ..+.+||||+|.||+|+++|.+|++.|+ .|++
T Consensus       391 iN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~~~~~~-~~~~  429 (431)
T cd07095         391 WNRPTTG-ASSTAPFGGVGLSGNHRPSAYYAADYCA-YPVA  429 (431)
T ss_pred             ECCCCCC-CCCCCCCCCcccccCCCCChHHHHHHHh-hhhc
Confidence            9987653 4567999999999999999999999554 4443


No 84 
>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=100.00  E-value=2.6e-88  Score=709.77  Aligned_cols=432  Identities=24%  Similarity=0.333  Sum_probs=395.6

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|++++++.|++|+++|+.++.++|.++|+++++.|++++++|++++++|+|||..++. .|+..++..+++++..
T Consensus        49 ~a~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~  127 (496)
T PLN00412         49 ACTQEEVNKAMESAKAAQKAWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAV-TEVVRSGDLISYTAEE  127 (496)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999999999999999999999999999997 5999999999999887


Q ss_pred             HHHhhcCc-cccC-cccc--CCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHH
Q 038617           82 LDKWMAPK-KRRL-PLLF--FPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAET  157 (484)
Q Consensus        82 ~~~~~~~~-~~~~-~~~~--~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~  157 (484)
                      ..++.... .... ....  .+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..++++
T Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~  207 (496)
T PLN00412        128 GVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHC  207 (496)
T ss_pred             HHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHH
Confidence            77665321 1111 0001  122346789999999999999999999999999999999999999999999999999999


Q ss_pred             hccc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHH
Q 038617          158 IPLY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKV  234 (484)
Q Consensus       158 l~~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~  234 (484)
                      +.++ +|+|++|+++| +.+.++.|+.|+ +|.|.|||| .+|+.|++.++  ++|+++|+|||||+||++   |||++.
T Consensus       208 l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~g~~v~~~a~--~~~~~lElGG~~p~iV~~---dADl~~  281 (496)
T PLN00412        208 FHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTGIAISKKAG--MVPLQMELGGKDACIVLE---DADLDL  281 (496)
T ss_pred             HHHhCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HHHHHHHHHhC--CCcEEEEcCCCceEEEcC---CCCHHH
Confidence            9998 99999999998 467888899997 999999999 99999998875  799999999999999999   999999


Q ss_pred             HHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhc-CC
Q 038617          235 TVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLV-AD  313 (484)
Q Consensus       235 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~-~~  313 (484)
                      |++.+++++|. |+||.|++++|+|||+++||+|+++|+++++++++|+|.+++++||++++.+++++.++++++.. |+
T Consensus       282 Aa~~i~~~~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gp~i~~~~~~~v~~~i~~a~~~Ga  360 (496)
T PLN00412        282 AAANIIKGGFS-YSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPPEDDCDITPVVSESSANFIEGLVMDAKEKGA  360 (496)
T ss_pred             HHHHHHHHHHh-cCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhCccCCCcccCCcCCCcCHHHHHHHHHHHHHHHHCCC
Confidence            99999999999 99999999999999999999999999999999999999558899999999999999999998864 67


Q ss_pred             ceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcc
Q 038617          314 AIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGT  393 (484)
Q Consensus       314 ~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l  393 (484)
                      ++++||..  .|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++
T Consensus       361 ~~l~~~~~--~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~deai~~an~~~~gL~a~v~t~d~~~a~~~~~~l  438 (496)
T PLN00412        361 TFCQEWKR--EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAM  438 (496)
T ss_pred             EEEecCCC--CCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhC
Confidence            88887643  6899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617          394 SSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS  444 (484)
Q Consensus       394 ~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~  444 (484)
                      ++|+|+||++.. ...+.+||||+|.||+|+++|.+|+++||+.|++++..
T Consensus       439 ~~G~v~vN~~~~-~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~~~  488 (496)
T PLN00412        439 ETGTVQINSAPA-RGPDHFPFQGLKDSGIGSQGITNSINMMTKVKSTVINL  488 (496)
T ss_pred             CcceEEEcCCCC-CCCCCCCCCCccccccCCCChHHHHHHhcceEEEEEec
Confidence            999999998764 24467999999999999999999999999999997753


No 85 
>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA. The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.
Probab=100.00  E-value=2.5e-88  Score=714.14  Aligned_cols=433  Identities=23%  Similarity=0.327  Sum_probs=402.5

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++++++|++|++.|+.++.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++.+++++..
T Consensus        65 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~i~~l~~~~~~  143 (518)
T cd07125          65 LADAEDVDAALAIAAAAFAGWSATPVEERAEILEKAADLLEANRGELIALAAAEAGKTLADAD-AEVREAIDFCRYYAAQ  143 (518)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence            478899999999999999999999999999999999999999999999999999999999997 4999999999999998


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      ++++.+......   ..+....++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus       144 ~~~~~~~~~~~~---~~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~ll~ea  220 (518)
T cd07125         144 ARELFSDPELPG---PTGELNGLELHGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARAVELLHEA  220 (518)
T ss_pred             HHHhcCCccccC---CCCceeEEEEecccEEEEECCcchHHHHHHHHHHHHHHcCCEEEEeCCCcCcHHHHHHHHHHHHc
Confidence            888765432111   12445688999999999999999999999999999999999999999999999999999999998


Q ss_pred             -cCccceeeccCCh-hHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcc---cCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617          162 -LDCKAIKVTNGGV-DVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKH---LTPVTLELGGKCPAILDTLSSPLDIKVT  235 (484)
Q Consensus       162 -lp~g~v~~v~g~~-~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~---~~~~~lelgG~~p~iV~~~~~daDl~~a  235 (484)
                       +|+|++|+++|+. +.+..|++|+ +|.|+||||+.+|+.|++.++++   ++|+++|+|||||+||++   |||++.|
T Consensus       221 GlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~~v~lElgGk~p~iV~~---dADl~~A  297 (518)
T cd07125         221 GVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDGPILPLIAETGGKNAMIVDS---TALPEQA  297 (518)
T ss_pred             CCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHHHHHhhhccCCCceEEEEcCCCCeEEECC---CCCHHHH
Confidence             9999999999954 5888999987 99999999999999999988855   799999999999999999   9999999


Q ss_pred             HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhcCCc
Q 038617          236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLVADA  314 (484)
Q Consensus       236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~~~~  314 (484)
                      ++.+++++|. |+||.|++++|||||++++|+|+++|++++.++++|+| ++++++||++++.+++++.++++++..+++
T Consensus       298 a~~iv~g~f~-nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~~~  376 (518)
T cd07125         298 VKDVVQSAFG-SAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRGEAW  376 (518)
T ss_pred             HHHHHHHHHh-cCCCCCCCCeEEEEcchhHHHHHHHHHHHHhcCCccCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCE
Confidence            9999999999 99999999999999999999999999999999999999 889999999999999999999999877788


Q ss_pred             eeeCCCcCC-CCCeeeeEEEeCCCCCCcccccceecceeeeeeeC--CHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh
Q 038617          315 IVHGGLLDK-ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLN--NIQESIEFINSRPKPLAIYAFTKDETFKKQIVS  391 (484)
Q Consensus       315 ~~~gg~~~~-~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~--~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~  391 (484)
                      +++||..+. .|+|+.|||+.++  +|++++||+||||++|++|+  |+||||+++|+++|||++||||+|.+.++++++
T Consensus       377 vl~gg~~~~~~g~~~~Ptvl~~v--~~~i~~eE~FgPVl~v~~~~~~~~deAi~~~n~~~~gLta~Vft~d~~~~~~~~~  454 (518)
T cd07125         377 LIAPAPLDDGNGYFVAPGIIEIV--GIFDLTTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREIEYWRE  454 (518)
T ss_pred             EEeCCCcCCCCCeEEccEEEeec--CChHhhCcccCCeEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHH
Confidence            899987643 6899999999887  89999999999999999999  999999999999999999999999999999999


Q ss_pred             ccceeeEEECCCccccCCCCCCcccCCCCCCCC-cchHHHHHHhhhccEEEEec
Q 038617          392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGR-YHGHYSFETFSHEKAIMQRS  444 (484)
Q Consensus       392 ~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~-~~g~~~~~~f~~~k~v~~~~  444 (484)
                      ++++|+|+||+.+.+...+.+||||+|.||+|+ .+|.+++++||+.|++++..
T Consensus       455 ~l~~G~V~IN~~~~~~~~~~~PfGG~~~SG~G~~~gg~~~~~~ft~~k~i~~~~  508 (518)
T cd07125         455 RVEAGNLYINRNITGAIVGRQPFGGWGLSGTGPKAGGPNYLLRFGNEKTVSLNT  508 (518)
T ss_pred             hCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccccHHHHHHhcceEEEEEEc
Confidence            999999999998765555779999999999995 67899999999999998764


No 86 
>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.
Probab=100.00  E-value=3.3e-88  Score=708.07  Aligned_cols=432  Identities=21%  Similarity=0.290  Sum_probs=399.6

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|++++++.|++|++.|+++|.++|.++|++++++|++++++|+++++.|+|||..++. .|+..+++.+++++..
T Consensus        34 ~~~~~~v~~ai~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~i~~~~~~~~~  112 (477)
T TIGR01722        34 FASVDEVDAAVASARETFLTWGQTSLAQRTSVLLRYQALLKEHRDEIAELITAEHGKTHSDAL-GDVARGLEVVEHACGV  112 (477)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence            478899999999999999999999999999999999999999999999999999999999997 5999999999998876


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      ...+.+.. ..  ....+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.+++.++
T Consensus       113 ~~~~~g~~-~~--~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~l~~a  189 (477)
T TIGR01722       113 NSLLKGET-ST--QVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAVKLAELFSEA  189 (477)
T ss_pred             HHHhcCcc-cc--cCCCCceEEEEEcccceEEEEccCChHHHHHHHHHHHHHhcCCEEEeeCcccChHHHHHHHHHHHHh
Confidence            66543221 11  1112334577899999999999999999999999999999999999999999999999999999999


Q ss_pred             -cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617          162 -LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI  239 (484)
Q Consensus       162 -lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i  239 (484)
                       +|+|++|+++|+.+.++.|++|+ ||.|+||||+.+|+.|.+.++.++||+++|+|||||+||++   |||++.|++.+
T Consensus       190 glP~g~~~~v~g~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~~~~~~v~lElGG~n~~iV~~---dADl~~a~~~i  266 (477)
T TIGR01722       190 GAPDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAHGKRVQALGGAKNHMVVMP---DADKDAAADAL  266 (477)
T ss_pred             CcCCCeEEEEeCCHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCceEECC---CCCHHHHHHHH
Confidence             99999999999877889999997 99999999999999999999999999999999999999999   99999999999


Q ss_pred             HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCceee
Q 038617          240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIVH  317 (484)
Q Consensus       240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~  317 (484)
                      ++++|. |+||.|++++|+|||+++ |+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ |+++++
T Consensus       267 ~~~~f~-~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~~~~G~~~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~  344 (477)
T TIGR01722       267 VGAAYG-AAGQRCMAISAAVLVGAA-DEWVPEIRERAEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLL  344 (477)
T ss_pred             HHHHHH-hcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEe
Confidence            999999 999999999999999999 9999999999999999999 889999999999999999999999864 779999


Q ss_pred             CCCcC-----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617          318 GGLLD-----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG  392 (484)
Q Consensus       318 gg~~~-----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~  392 (484)
                      ||...     ++|+|++|||+.+++++|.+++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+++++++
T Consensus       345 gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~  424 (477)
T TIGR01722       345 DGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRDGAAARRFQHE  424 (477)
T ss_pred             CCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHh
Confidence            98641     3589999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cceeeEEECCCccccCCCCCCcccCCCCCCC--CcchHHHHHHhhhccEEEEe
Q 038617          393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIG--RYHGHYSFETFSHEKAIMQR  443 (484)
Q Consensus       393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G--~~~g~~~~~~f~~~k~v~~~  443 (484)
                      +++|.|+||++... ..+.+||||+|.||+|  +++|.+++++||+.|++++.
T Consensus       425 l~~g~v~iN~~~~~-~~~~~pfgG~k~SG~G~~~~~g~~~l~~~~~~k~i~~~  476 (477)
T TIGR01722       425 IEVGQVGVNVPIPV-PLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKTVTTR  476 (477)
T ss_pred             CCeeeEEECCCCCC-CCCCCCCCccccccCCCCccChHHHHHHhcCeeEEEEe
Confidence            99999999986543 4568999999999999  57899999999999998765


No 87 
>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.
Probab=100.00  E-value=3.1e-88  Score=706.35  Aligned_cols=429  Identities=21%  Similarity=0.303  Sum_probs=392.3

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++|+++|++|+   +.++..+|.++|++++++|++++++|++++++|+|||..++.. |+..+++.+++++..
T Consensus        35 ~~~~~~v~~av~~A~~a~---~~~~~~~R~~~l~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~  110 (472)
T TIGR03250        35 KASVDDVRRAFAIAAAYR---PTLTRYERSAILDRAAALLAARKEEISDLITLESGLSKKDSLY-EVGRVADVLTFAAAE  110 (472)
T ss_pred             CCCHHHHHHHHHHHHHHH---hhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence            578899999999999887   4689999999999999999999999999999999999999975 999999999999988


Q ss_pred             HHHhhcCcccc-CccccCCCcceEEeecc-eEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617           82 LDKWMAPKKRR-LPLLFFPASGEVVSEPF-GVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP  159 (484)
Q Consensus        82 ~~~~~~~~~~~-~~~~~~~~~~~~~~~P~-GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~  159 (484)
                      +.++.+..... ......+...++.++|+ |||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~  190 (472)
T TIGR03250       111 ALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLSALYLADILY  190 (472)
T ss_pred             HHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHH
Confidence            87654322110 00111123457899998 99999999999999999999999999999999999999999999999999


Q ss_pred             cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHH
Q 038617          160 LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTV  236 (484)
Q Consensus       160 ~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa  236 (484)
                      ++ +|+|++|+++| +.+.+..|++|+ +|.|.||||+.+|+.|++.++  ++|+++|+|||||+||++   |||++.|+
T Consensus       191 ~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~--~~~~~lElGGk~p~iV~~---dAdl~~aa  265 (472)
T TIGR03250       191 EAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAARAG--YRRQVLELGGNDPLIVME---DADLDRAA  265 (472)
T ss_pred             HcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhc--CCceEEecCCCCeEEECC---CCCHHHHH
Confidence            98 99999999998 567899999997 999999999999999998775  689999999999999999   99999999


Q ss_pred             HHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCc
Q 038617          237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADA  314 (484)
Q Consensus       237 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~  314 (484)
                      +.+++++|. |+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.++++++++++++.+ |++
T Consensus       266 ~~i~~~~f~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~  344 (472)
T TIGR03250       266 DLAVKGSYK-NSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGAR  344 (472)
T ss_pred             HHHHHHHHH-hhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCE
Confidence            999999999 99999999999999999999999999999999999998 888999999999999999999999864 679


Q ss_pred             eeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccc
Q 038617          315 IVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTS  394 (484)
Q Consensus       315 ~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~  394 (484)
                      +++||..  +|+|++|||+++++++|++++||+||||++|++|+|++||++++|+++|||++||||+|.+.+.+++++++
T Consensus       345 vl~gg~~--~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~  422 (472)
T TIGR03250       345 LLLGNVR--DGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDYITRFIAELQ  422 (472)
T ss_pred             EEECCCc--CCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCccceEEEEcCCHHHHHHHHHHCC
Confidence            9999865  58999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeEEECCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEe
Q 038617          395 SGSLIFNDTLVQQLCDVLPFGGVGQSGIG-RYHGHYSFETFSHEKAIMQR  443 (484)
Q Consensus       395 ~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~  443 (484)
                      +|+|+||+.+.. ..+.+||||+|.||+| +.+|.+|+++||+.|+++++
T Consensus       423 ~G~v~iN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~~l~~ft~~k~i~~~  471 (472)
T TIGR03250       423 VGTVNVWEVPGY-RLELTPFGGIKDSGLGYKEGVQEAMKSFTNLKTYSLP  471 (472)
T ss_pred             cceEEEcCCCCC-CCCCCCCCccccccCCCCCChHHHHHHhhceEEEEEe
Confidence            999999987642 3456999999999999 56678999999999998765


No 88 
>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like. Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.
Probab=100.00  E-value=3.2e-88  Score=700.68  Aligned_cols=422  Identities=29%  Similarity=0.457  Sum_probs=391.4

Q ss_pred             HHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHhh
Q 038617            7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWM   86 (484)
Q Consensus         7 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~   86 (484)
                      |+++++++|++||+.|++++.++|.++|++++++|+++.++|++++++|+|||..++.. |+..+++.+++++...+.+.
T Consensus         1 ~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~-ei~~~~~~l~~~~~~~~~~~   79 (432)
T cd07105           1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGF-NVDLAAGMLREAASLITQII   79 (432)
T ss_pred             CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhc
Confidence            58899999999999999999999999999999999999999999999999999887764 99999999999998887652


Q ss_pred             cCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc-cCcc
Q 038617           87 APKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY-LDCK  165 (484)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a-lp~g  165 (484)
                      ...   .+....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.+++.++ +|+|
T Consensus        80 ~~~---~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~g  156 (432)
T cd07105          80 GGS---IPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKG  156 (432)
T ss_pred             Cee---cccCCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCC
Confidence            221   111112345678999999999999999999999999999999999999999999999999999999998 9999


Q ss_pred             ceeeccCC----hhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHH
Q 038617          166 AIKVTNGG----VDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRII  240 (484)
Q Consensus       166 ~v~~v~g~----~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~  240 (484)
                      ++|+++|+    .++++.|++|+ +|.|+||||+.+|+.|.+.++++++|+++|+|||||+||++   |+|++.|++.++
T Consensus       157 v~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~---dadl~~aa~~i~  233 (432)
T cd07105         157 VLNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLE---DADLDAAANAAL  233 (432)
T ss_pred             cEEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEeCCCCCceEECC---CCCHHHHHHHHH
Confidence            99999974    24688999998 99999999999999999999999999999999999999999   999999999999


Q ss_pred             HhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhc-CCceeeCC
Q 038617          241 GGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLV-ADAIVHGG  319 (484)
Q Consensus       241 ~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~gg  319 (484)
                      +++|. |+||.|+++++||||+++||+|+++|++++.++++|    ++++||++++.+++++.++++++.. ++++++||
T Consensus       234 ~~~~~-~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg  308 (432)
T cd07105         234 FGAFL-NSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAG----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGG  308 (432)
T ss_pred             HHHHh-cCCCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCC----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCC
Confidence            99999 999999999999999999999999999999999877    6789999999999999999998864 67899998


Q ss_pred             CcC--CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceee
Q 038617          320 LLD--KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGS  397 (484)
Q Consensus       320 ~~~--~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~  397 (484)
                      ..+  ..|+|+.|||+.+++++|.+++||+||||++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|+
T Consensus       309 ~~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~  388 (432)
T cd07105         309 LADESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGA  388 (432)
T ss_pred             CcCCCCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCe
Confidence            764  468999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617          398 LIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM  441 (484)
Q Consensus       398 v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~  441 (484)
                      |+||+++.+ ..+.+||||+|.||+|+++|.+++++|++.|++.
T Consensus       389 v~vN~~~~~-~~~~~PfgG~~~SG~G~~~g~~~l~~~~~~k~v~  431 (432)
T cd07105         389 VHINGMTVH-DEPTLPHGGVKSSGYGRFNGKWGIDEFTETKWIT  431 (432)
T ss_pred             EEECCCCCC-CCCCCCCCCcccccccccChHHHHHHhhceEEEe
Confidence            999987754 4678999999999999999999999999999885


No 89 
>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins. ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1  (ALDH3A1, ALDH3B1,  EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar  sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.
Probab=100.00  E-value=7.4e-88  Score=695.85  Aligned_cols=424  Identities=53%  Similarity=0.907  Sum_probs=393.6

Q ss_pred             HHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHhhcCc
Q 038617           10 DKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPK   89 (484)
Q Consensus        10 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~   89 (484)
                      +++++|++||+.|+++|+.+|.++|++++++|++++++|+++++.|+|||..++...|+..+++.++++++.++.+.++.
T Consensus         2 ~~v~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~~~   81 (426)
T cd07087           2 ELVARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMKPR   81 (426)
T ss_pred             hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            48899999999999999999999999999999999999999999999999888766699999999999998887765443


Q ss_pred             cccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccccCccceee
Q 038617           90 KRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKV  169 (484)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~alp~g~v~~  169 (484)
                      .........+...+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+++++.+++|+|++|+
T Consensus        82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~~~P~gv~~v  161 (426)
T cd07087          82 RVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPKYFDPEAVAV  161 (426)
T ss_pred             ccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHhCCCCEEEE
Confidence            22111111234568899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHhhcccCCC
Q 038617          170 TNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNG  249 (484)
Q Consensus       170 v~g~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~~~~~~~G  249 (484)
                      ++|+.+.+..|++|++|.|+||||+.+|+.|.+.+++++||+++|+|||||+||++   |||++.|++.+++++|. |+|
T Consensus       162 v~g~~~~~~~l~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~---dadl~~aa~~i~~~~~~-~~G  237 (426)
T cd07087         162 VEGGVEVATALLAEPFDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDK---DANLEVAARRIAWGKFL-NAG  237 (426)
T ss_pred             EeCCchHHHHHHhCCCCEEEEeCChHHHHHHHHHHHhhCCceEEeccCCCceEecC---CCCHHHHHHHHHHHHHh-ccC
Confidence            99977788999998999999999999999999999999999999999999999999   99999999999999999 999


Q ss_pred             CccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCCCcCCCCCeee
Q 038617          250 QVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLDKENLFIE  329 (484)
Q Consensus       250 q~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~  329 (484)
                      |.|+++++||||++++|+|+++|++.++++++++|++++++||++++.+.+++.++++++    ++++||..+.+|+|++
T Consensus       238 Q~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~~~~~~~gpli~~~~~~~~~~~i~~a----~v~~gg~~~~~g~~~~  313 (426)
T cd07087         238 QTCIAPDYVLVHESIKDELIEELKKAIKEFYGEDPKESPDYGRIINERHFDRLASLLDDG----KVVIGGQVDKEERYIA  313 (426)
T ss_pred             CccccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCCccCCCcCCCCCHHHHHHHHHHHhcc----eEEeCCccCCCCCEEe
Confidence            999999999999999999999999999999888888889999999999999999999865    7888987655689999


Q ss_pred             eEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEEECCCccccCC
Q 038617          330 PTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLC  409 (484)
Q Consensus       330 Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~  409 (484)
                      |||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+.+.+...
T Consensus       314 Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~  393 (426)
T cd07087         314 PTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVLLHAAI  393 (426)
T ss_pred             eEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEECCcccccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999987654456


Q ss_pred             CCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617          410 DVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM  441 (484)
Q Consensus       410 ~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~  441 (484)
                      +.+||||+|.||+|+++|.+++++|++.|+++
T Consensus       394 ~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~  425 (426)
T cd07087         394 PNLPFGGVGNSGMGAYHGKAGFDTFSHLKSVL  425 (426)
T ss_pred             CCCCCCCCCcccCCCccCHHHHHHhccceeec
Confidence            78999999999999999999999999999874


No 90 
>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like. Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.
Probab=100.00  E-value=5.8e-88  Score=704.04  Aligned_cols=430  Identities=29%  Similarity=0.440  Sum_probs=398.5

Q ss_pred             CCCHHHHHHHHHHHHHHhH--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFR--SGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL   79 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~   79 (484)
                      .++.+++++++++|++|++  .|+++|.++|.++|++++++|.+++++|++++++|+|||..++.. |+..+++.+++++
T Consensus        15 ~~~~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~-ev~~~~~~~~~~a   93 (457)
T cd07114          15 EASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRETRA-QVRYLAEWYRYYA   93 (457)
T ss_pred             CCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHH
Confidence            4788999999999999997  499999999999999999999999999999999999999999875 9999999999988


Q ss_pred             HHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617           80 SCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP  159 (484)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~  159 (484)
                      ...+......   .+....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|+++|.
T Consensus        94 ~~~~~~~~~~---~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p~~~~~l~~~l~  170 (457)
T cd07114          94 GLADKIEGAV---IPVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAE  170 (457)
T ss_pred             HHHHHhcCcc---cccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccchHHHHHHHHHHH
Confidence            7665442211   1111123456789999999999999999999999999999999999999999999999999999999


Q ss_pred             cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHH
Q 038617          160 LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTV  236 (484)
Q Consensus       160 ~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa  236 (484)
                      ++ +|+|++|+++| +.+.++.|++|+ +|.|+||||+.+|+.+++.++++++|+++|+|||||+||++   |||++.|+
T Consensus       171 ~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~---dAdl~~aa  247 (457)
T cd07114         171 EAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGGKSPNIVFD---DADLDAAV  247 (457)
T ss_pred             HcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEecCCCCeeEECC---CCCHHHHH
Confidence            99 99999999999 556889999997 99999999999999999999999999999999999999999   99999999


Q ss_pred             HHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCc
Q 038617          237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADA  314 (484)
Q Consensus       237 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~  314 (484)
                      +.|++++|. |+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+.+++.++++++.+ |++
T Consensus       248 ~~i~~~~~~-~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~  326 (457)
T cd07114         248 NGVVAGIFA-AAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVARAREEGAR  326 (457)
T ss_pred             HHHHHHHHh-ccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCE
Confidence            999999999 99999999999999999999999999999999999999 889999999999999999999998864 678


Q ss_pred             eeeCCCcCC-----CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 038617          315 IVHGGLLDK-----ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQI  389 (484)
Q Consensus       315 ~~~gg~~~~-----~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~  389 (484)
                      +++||....     .|+|++|||+.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++
T Consensus       327 ~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~ift~d~~~~~~~  406 (457)
T cd07114         327 VLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDLARAHRV  406 (457)
T ss_pred             EEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCHHHHHHHhhCCCcCceeEEECCCHHHHHHH
Confidence            999986532     589999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617          390 VSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM  441 (484)
Q Consensus       390 ~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~  441 (484)
                      ++++++|+|+||+...  ..+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus       407 ~~~l~~g~v~iN~~~~--~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~  456 (457)
T cd07114         407 ARAIEAGTVWVNTYRA--LSPSSPFGGFKDSGIGRENGIEAIREYTQTKSVW  456 (457)
T ss_pred             HHhcCcceEEECCCCC--CCCCCCCCCCccCcCCccchHHHHHHHhceeEEe
Confidence            9999999999998654  4678999999999999999999999999999875


No 91 
>PF00171 Aldedh:  Aldehyde dehydrogenase family;  InterPro: IPR015590 Aldehyde dehydrogenases (1.2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation.  The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....
Probab=100.00  E-value=2.8e-89  Score=714.85  Aligned_cols=429  Identities=32%  Similarity=0.509  Sum_probs=399.7

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++++++|++|++.|+.++..+|.++|++++++|+++.++|++++++|+|||..++.. |+..+++.+++++..
T Consensus        25 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~  103 (462)
T PF00171_consen   25 SATAEDVDRAVEAARAAFKEWSKLPAAERARILERFADLLEERRDELAELIALETGKPIAEARG-EVDRAIDFLRYYADA  103 (462)
T ss_dssp             EBSHHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSSHHHHHH-HHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHhhcccccccccccccccccccccc-hhhhhhhhhhhhhhc
Confidence            4688999999999999999999999999999999999999999999999999999999999987 999999999999999


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      ++++.. +....   ..+....++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus       104 ~~~~~~-~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VVlkps~~~~~~~~~l~~~~~~A  179 (462)
T PF00171_consen  104 ARKLAG-EVLPS---DPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAGNTVVLKPSEQAPLTALLLAELLEEA  179 (462)
T ss_dssp             HHHHTE-EEEEE---STTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT-EEEEEEBTTSHHHHHHHHHHHHHH
T ss_pred             ccceeh-hhccc---ccccccccccccccceeecccccccccccccchhhhhcccccceeeeccccccccccchhhcccc
Confidence            988543 32211   24567889999999999999999999999999999999999999999999999999999999998


Q ss_pred             -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617          162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR  238 (484)
Q Consensus       162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~  238 (484)
                       +|+|++|+++| +.+.+..|+.|+ +|.|.||||+++|+.|.+.++++++|+++|+|||||+||++   |||+|.|++.
T Consensus       180 glP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~---daDld~aa~~  256 (462)
T PF00171_consen  180 GLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAAKNLKPVVLELGGKNPVIVDP---DADLDKAAEA  256 (462)
T ss_dssp             TSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHHTTTSEEEEEECEEEEEEE-T---TSHHHHHHHH
T ss_pred             ccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhcccccccccccccccceeeEec---cccccccccc
Confidence             99999999999 778999999997 99999999999999999999999999999999999999999   9999999999


Q ss_pred             HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617          239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV  316 (484)
Q Consensus       239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~  316 (484)
                      +++++|. |+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||+++..+.+++.++++++.. |++++
T Consensus       257 iv~~~~~-~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~  335 (462)
T PF00171_consen  257 IVRGAFF-NSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDESTDVGPLISKAQRERVKALIEDAVAEGAKVL  335 (462)
T ss_dssp             HHHHHHG-GGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCHCSSHHHHHHHHHHHHHHHHTTSEEE
T ss_pred             ccchhcc-cccccccccccccccccccchhhhhhhhccccccccCCccccccccccccchhhhhcccccccccccccccc
Confidence            9999999 99999999999999999999999999999999999999 889999999999999999999999875 78999


Q ss_pred             eCC----CcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617          317 HGG----LLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG  392 (484)
Q Consensus       317 ~gg----~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~  392 (484)
                      +||    .....|+|++|||+.+++++|+++++|+||||++|++|+|+|||++++|+++|||+++|||+|.+.+++++++
T Consensus       336 ~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~  415 (462)
T PF00171_consen  336 CGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDEAIALANDSEYGLTASVFSRDESRAERLARR  415 (462)
T ss_dssp             EETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccceecccccchhhhhcccccCCCceeEEeccccccccccccc
Confidence            998    2346799999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 038617          393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI  440 (484)
Q Consensus       393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v  440 (484)
                      +++|+|+||+++.+.... +||||+|.||+|+++|.+|+++|++.|+|
T Consensus       416 l~~g~v~iN~~~~~~~~~-~pfgG~~~SG~G~~~g~~~l~~~~~~k~V  462 (462)
T PF00171_consen  416 LEAGRVWINDPPTGDPDG-LPFGGFKQSGIGREGGPEGLDEFTQIKTV  462 (462)
T ss_dssp             STSSEEEESSSSTGGTTS-SEBE-SGGGEESEBSHHHHHHGTEEEEEE
T ss_pred             ccccceeecCCccccccc-CCCCCcccccCCcchHHHHHHHhCCccCC
Confidence            999999999998764444 89999999999999999999999999986


No 92 
>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase. Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.
Probab=100.00  E-value=1.4e-87  Score=703.97  Aligned_cols=431  Identities=23%  Similarity=0.319  Sum_probs=395.1

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++++++|++|+++|++++.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++.+++++..
T Consensus        31 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~  109 (484)
T TIGR03240        31 AASAAQVEAAVAAARAAFPAWARLSLEERIAVVQRFAALLEERKEALARVIARETGKPLWETR-TEVASMIGKVAISIKA  109 (484)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999999999999999999999999999987 5999999999988877


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      ...+.+...    ....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus       110 ~~~~~g~~~----~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~t~~~l~~~~~~a  185 (484)
T TIGR03240       110 YHERTGESE----NPMPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAEETVKLWEKA  185 (484)
T ss_pred             HHHhcCccc----cCCCCceeEEEEecccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHh
Confidence            766543221    1112334678899999999999999999999999999999999999999999999999999999999


Q ss_pred             -cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcc-cCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617          162 -LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKH-LTPVTLELGGKCPAILDTLSSPLDIKVTVKR  238 (484)
Q Consensus       162 -lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~-~~~~~lelgG~~p~iV~~~~~daDl~~aa~~  238 (484)
                       +|+|++|+++|+.+.++.|++|+ +|.|+||||+++|+.|++.++.+ .+++++|+|||||+||++   |||++.|++.
T Consensus       186 GlP~gvv~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~~~~~~~~lElGGk~p~iV~~---dADl~~aa~~  262 (484)
T TIGR03240       186 GLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPEKILALEMGGNNPLIVDE---VADIDAAVHL  262 (484)
T ss_pred             CcCcccEEEEeCCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhcCCCcEEEECCCCCeEEECC---CCCHHHHHHH
Confidence             99999999999778899999996 99999999999999999987765 588999999999999999   9999999999


Q ss_pred             HHHhhcccCCCCccccCCceEEccchH-HHHHHHHHHHHHhhcCCCC--CCCCccccccCHHHHHHHHHHhhchhc-CCc
Q 038617          239 IIGGKFASCNGQVCVGVDYILVEKKFA-ATLIESLKTTIKKFYGENP--KDSKSISRIINEYHFERLRKLLKDPLV-ADA  314 (484)
Q Consensus       239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~~--~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~  314 (484)
                      +++++|. |+||.|++++|||||++++ |+|+++|.+.++++++|+|  ++++++||++++.+++++.++++++.+ |++
T Consensus       263 i~~~~~~-~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~  341 (484)
T TIGR03240       263 IIQSAFI-SAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDAEPQPFMGAVISLQAAQRLLAAQAKLLALGGK  341 (484)
T ss_pred             HHHHHHh-cCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCCCCcCCCCcccccCCHHHHHHHHHHHHHHHHCCCE
Confidence            9999999 9999999999999999985 9999999999999999986  667899999999999999999999865 778


Q ss_pred             eeeCCCc-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcc
Q 038617          315 IVHGGLL-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGT  393 (484)
Q Consensus       315 ~~~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l  393 (484)
                      +++||.. +.+++|++|||+ +++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++
T Consensus       342 ~~~gg~~~~~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l  420 (484)
T TIGR03240       342 SLLAMRQLDPGAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDRELYDRFLLEI  420 (484)
T ss_pred             EEeCCCcCCCCCEEEcCEEE-ccCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhC
Confidence            8888754 345789999999 68999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617          394 SSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS  444 (484)
Q Consensus       394 ~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~  444 (484)
                      ++|+|+||+...+ ..+.+||||+|.||+|+++|.++++ |++.|++.++.
T Consensus       421 ~aG~v~iN~~~~~-~~~~~pfGG~~~SG~g~~~g~~~~~-~~~~~~~~~~~  469 (484)
T TIGR03240       421 RAGIVNWNKPLTG-ASSAAPFGGIGASGNHRPSAYYAAD-YCAYPVASLEA  469 (484)
T ss_pred             CcceEEEECCCCC-CCCCCCcCCcccccCCCCCchHHHh-heeeeEEEEec
Confidence            9999999987654 4577999999999999999977766 99999998874


No 93 
>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28)  involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.
Probab=100.00  E-value=2.2e-87  Score=696.05  Aligned_cols=424  Identities=29%  Similarity=0.421  Sum_probs=394.0

Q ss_pred             HHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHhh
Q 038617            7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWM   86 (484)
Q Consensus         7 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~   86 (484)
                      |++++++.|++|++.|++++.++|.++|+++++.|++++++|++++++|+||+..++.. |+..+++.+++++....+..
T Consensus         1 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~-ei~~~~~~l~~~~~~~~~~~   79 (431)
T cd07104           1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAF-EVGAAIAILREAAGLPRRPE   79 (431)
T ss_pred             CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhc
Confidence            58999999999999999999999999999999999999999999999999999999875 99999999999988776542


Q ss_pred             cCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHH-HHHHHHHhccc-cCc
Q 038617           87 APKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVEC-ASFLAETIPLY-LDC  164 (484)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t-~~~l~~~l~~a-lp~  164 (484)
                      .. ..  +....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.+ +..+.+++.++ +|+
T Consensus        80 ~~-~~--~~~~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aGlP~  156 (431)
T cd07104          80 GE-IL--PSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPK  156 (431)
T ss_pred             Cc-cc--cCCCCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcCCCc
Confidence            21 11  111134466889999999999999999999999999999999999999999999998 67899999998 999


Q ss_pred             cceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHh
Q 038617          165 KAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGG  242 (484)
Q Consensus       165 g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~  242 (484)
                      |++|+++| +.+.++.|++|+ +|.|.||||+.+|+.|++.++++++|+++|+|||||+||++   |||++.|++.++++
T Consensus       157 gvv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~---dadl~~aa~~i~~~  233 (431)
T cd07104         157 GVLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLD---DADLDLAVSAAAFG  233 (431)
T ss_pred             ccEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEEcCCCCeEEECC---CCCHHHHHHHHHHH
Confidence            99999998 456889999997 99999999999999999999999999999999999999999   99999999999999


Q ss_pred             hcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCceeeCCC
Q 038617          243 KFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIVHGGL  320 (484)
Q Consensus       243 ~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~gg~  320 (484)
                      +|. |+||.|+++++||||++++|+|+++|++++.++++|+| ++++++||++++.+++++.++++++.. |+++++||.
T Consensus       234 ~~~-~~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~  312 (431)
T cd07104         234 AFL-HQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGT  312 (431)
T ss_pred             HHh-cCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCC
Confidence            999 99999999999999999999999999999999999999 788899999999999999999998864 778999986


Q ss_pred             cCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEEE
Q 038617          321 LDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIF  400 (484)
Q Consensus       321 ~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~i  400 (484)
                      .  +|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+.++++++++|+|+|
T Consensus       313 ~--~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~i  390 (431)
T cd07104         313 Y--EGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHI  390 (431)
T ss_pred             C--CCceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcCeEEE
Confidence            4  58999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617          401 NDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM  441 (484)
Q Consensus       401 N~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~  441 (484)
                      |+++.+ ..+.+||||+|.||+|+++|++++++|++.|+++
T Consensus       391 N~~~~~-~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~~~  430 (431)
T cd07104         391 NDQTVN-DEPHVPFGGVKASGGGRFGGPASLEEFTEWQWIT  430 (431)
T ss_pred             CCCCCC-CCCCCCCCCcccccCCccchHHHHHHhhceeEEe
Confidence            998765 4578999999999999999999999999999875


No 94 
>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like. In humans, the  aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC  of Burkholderia cepacia G4, and AphC of Comamonas testosterone.
Probab=100.00  E-value=2.7e-87  Score=699.36  Aligned_cols=430  Identities=28%  Similarity=0.418  Sum_probs=401.1

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+++++++++|++|++.|++++.++|.++|++++++|++++++|++++++|+||+..++...|+..+++.++++++.
T Consensus        15 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~i~~~~~~~~~   94 (455)
T cd07093          15 EGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITLARTRDIPRAAANFRFFADY   94 (455)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            57889999999999999999999999999999999999999999999999999999999988767999999999999887


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      ..+... ....   ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.++|.++
T Consensus        95 ~~~~~~-~~~~---~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~~~~~l~~~l~~a  170 (455)
T cd07093          95 ILQLDG-ESYP---QDGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEA  170 (455)
T ss_pred             HHHhCC-cccc---CCCCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcHHHHHHHHHHHhc
Confidence            765321 1111   112446678899999999999999999999999999999999999999999999999999999999


Q ss_pred             -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617          162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR  238 (484)
Q Consensus       162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~  238 (484)
                       +|+|++|+++| +.+.++.|++|+ +|+|+||||+.+|+.|.+.++++++|+++|+|||||+||++   |||++.|++.
T Consensus       171 glP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~---dAdl~~a~~~  247 (455)
T cd07093         171 GLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNPNIVFA---DADLDRAVDA  247 (455)
T ss_pred             CCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhhcccceEeecCCCCceEECC---CCCHHHHHHH
Confidence             99999999998 567889999987 99999999999999999999999999999999999999999   9999999999


Q ss_pred             HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchh-cCCcee
Q 038617          239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPL-VADAIV  316 (484)
Q Consensus       239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~-~~~~~~  316 (484)
                      +++++|. |+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+.+++.++++++. +|++++
T Consensus       248 i~~~~~~-~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~  326 (455)
T cd07093         248 AVRSSFS-NNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVELARAEGATIL  326 (455)
T ss_pred             HHHHHHh-ccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEE
Confidence            9999999 99999999999999999999999999999999999999 88899999999999999999999886 477999


Q ss_pred             eCCCcC-----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh
Q 038617          317 HGGLLD-----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS  391 (484)
Q Consensus       317 ~gg~~~-----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~  391 (484)
                      +||...     ..|+|+.|||++++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++
T Consensus       327 ~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gls~~i~t~d~~~~~~~~~  406 (455)
T cd07093         327 TGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVAR  406 (455)
T ss_pred             eCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHH
Confidence            998653     248899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617          392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM  441 (484)
Q Consensus       392 ~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~  441 (484)
                      ++++|+|+||+...+  .+.+||||+|.||+|+++|.+|+++|++.|+++
T Consensus       407 ~l~~g~v~iN~~~~~--~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~~~  454 (455)
T cd07093         407 RLEAGTVWVNCWLVR--DLRTPFGGVKASGIGREGGDYSLEFYTELKNVC  454 (455)
T ss_pred             hCCcceEEECCCCCC--CCCCCcCCCccCcCCCCchHHHHHHHhceeEEe
Confidence            999999999998764  467899999999999999999999999999875


No 95 
>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like. Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.
Probab=100.00  E-value=3.5e-87  Score=698.11  Aligned_cols=430  Identities=29%  Similarity=0.426  Sum_probs=401.0

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|++++++.|++|++.|+++|.++|.++|+++++.|++++++|++++++|+||+..+++. |+..+++.++++...
T Consensus        15 ~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~   93 (451)
T cd07103          15 DAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAEARG-EVDYAASFLEWFAEE   93 (451)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999999999999999999999999999975 999999999999887


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      .++..+..   .+....+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++
T Consensus        94 ~~~~~~~~---~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~~~l~~~l~~a  170 (451)
T cd07103          94 ARRIYGRT---IPSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALALAELAEEA  170 (451)
T ss_pred             HHHhcCcc---cccCCCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHc
Confidence            76654322   111113446788999999999999999999999999999999999999999999999999999999998


Q ss_pred             -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617          162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR  238 (484)
Q Consensus       162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~  238 (484)
                       +|+|++|+++| +.+.++.|++|+ +|.|+||||+.+|+.|.+.++++++|+++|+|||||+||++   |||++.|++.
T Consensus       171 glP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~---dadl~~aa~~  247 (451)
T cd07103         171 GLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELGGNAPFIVFD---DADLDKAVDG  247 (451)
T ss_pred             CCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECC---CCCHHHHHHH
Confidence             99999999999 457788899886 99999999999999999999999999999999999999999   9999999999


Q ss_pred             HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchh-cCCcee
Q 038617          239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPL-VADAIV  316 (484)
Q Consensus       239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~-~~~~~~  316 (484)
                      +++++|. |+||.|+++++||||++++|+|+++|++++.++++|+| ++++++||++++.+.+++.++++++. ++++++
T Consensus       248 i~~~~~~-~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~l  326 (451)
T cd07103         248 AIASKFR-NAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVEDAVAKGAKVL  326 (451)
T ss_pred             HHHHHHH-hcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHHHHHHHHHHCCCEEE
Confidence            9999999 99999999999999999999999999999999999998 88899999999999999999999986 477899


Q ss_pred             eCCCcCC-CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccce
Q 038617          317 HGGLLDK-ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS  395 (484)
Q Consensus       317 ~gg~~~~-~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~  395 (484)
                      +||.... +|+|+.|||+.+++++++++++|+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++
T Consensus       327 ~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~  406 (451)
T cd07103         327 TGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRVAEALEA  406 (451)
T ss_pred             eCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCc
Confidence            9987543 689999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617          396 GSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM  441 (484)
Q Consensus       396 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~  441 (484)
                      |.|+||++..  ..+.+||||+|.||+|+++|++++++||+.|++.
T Consensus       407 g~v~vN~~~~--~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~v~  450 (451)
T cd07103         407 GMVGINTGLI--SDAEAPFGGVKESGLGREGGKEGLEEYLETKYVS  450 (451)
T ss_pred             ceEEECCCCC--CCCCCCcCCCccCcCCccchHHHHHHHhceeEEe
Confidence            9999999875  3577999999999999999999999999999874


No 96 
>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase. The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.
Probab=100.00  E-value=2.5e-87  Score=700.65  Aligned_cols=429  Identities=21%  Similarity=0.273  Sum_probs=383.8

Q ss_pred             HHHHHHHHHHHHHH-hHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHH
Q 038617            5 MGEIEDKLAELRQT-FRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLD   83 (484)
Q Consensus         5 ~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~   83 (484)
                      .+|+++|+++|++| |+.|+.++.++|.++|++++++|++++++|+++ +.|+|||+.+++. |+..+++.++++++..+
T Consensus        35 ~~dv~~Av~~A~~A~~~~W~~~~~~~Ra~~L~~~a~~l~~~~~~la~l-~~e~Gkp~~ea~~-Ev~~~~~~~~~~a~~a~  112 (513)
T cd07128          35 GLDFAAAVAYAREKGGPALRALTFHERAAMLKALAKYLMERKEDLYAL-SAATGATRRDSWI-DIDGGIGTLFAYASLGR  112 (513)
T ss_pred             HHHHHHHHHHHHHhhhchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCHHHHHH-HHHHHHHHHHHHHHHHH
Confidence            37999999999998 799999999999999999999999999999995 9999999999984 99999999999999888


Q ss_pred             HhhcCcccc-----CccccCC-CcceEEeec-ceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHH
Q 038617           84 KWMAPKKRR-----LPLLFFP-ASGEVVSEP-FGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAE  156 (484)
Q Consensus        84 ~~~~~~~~~-----~~~~~~~-~~~~~~~~P-~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~  156 (484)
                      ++..+....     .+....+ ...+++++| +|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+++
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~  192 (513)
T cd07128         113 RELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFNFPVWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVK  192 (513)
T ss_pred             hhccccccccCCcccccCCCccccceEEEEecccEEEEECCcccHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHH
Confidence            765321110     0111111 134678999 599999999999999999999999999999999999999999999999


Q ss_pred             Hhccc--cCccceeeccCCh-hHHHHHHhCCCCeEEEeCChHHHHHHHHHH--hcccCceeeecCCcCceEEcCCCCCCC
Q 038617          157 TIPLY--LDCKAIKVTNGGV-DVCEQLLQQKWNKIFFTGSPRVGSIVMSAA--AKHLTPVTLELGGKCPAILDTLSSPLD  231 (484)
Q Consensus       157 ~l~~a--lp~g~v~~v~g~~-~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a--~~~~~~~~lelgG~~p~iV~~~~~daD  231 (484)
                      ++.++  +|+|++|+++|+. +.++.|  ..+|+|.||||+++|+.|++.+  +++++|+++|+|||||+||++   |||
T Consensus       193 ~~~eaG~lP~gv~~~v~g~~~~~~~~l--~~~d~v~fTGS~~~G~~i~~~a~~a~~~~~~~lElGGknp~IV~~---DAd  267 (513)
T cd07128         193 DIVESGLLPEGALQLICGSVGDLLDHL--GEQDVVAFTGSAATAAKLRAHPNIVARSIRFNAEADSLNAAILGP---DAT  267 (513)
T ss_pred             HHHHhCCCCCCcEEEecCChHHHhccc--CCCCEEEEECCHHHHHHHHHHhhhhccCceEEEeccCcCcEEECC---CCC
Confidence            99997  7999999999853 333332  1389999999999999999975  478999999999999999999   999


Q ss_pred             -----HHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHH
Q 038617          232 -----IKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKL  305 (484)
Q Consensus       232 -----l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~  305 (484)
                           ++.|++.+++++|. |+||.|++++|+|||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++
T Consensus       268 ~~~~dld~aa~~iv~~~f~-~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~  346 (513)
T cd07128         268 PGTPEFDLFVKEVAREMTV-KAGQKCTAIRRAFVPEARVDAVIEALKARLAKVVVGDPRLEGVRMGPLVSREQREDVRAA  346 (513)
T ss_pred             cchhhHHHHHHHHHHHHHH-hcCCcccCCceEEEehHHHHHHHHHHHHHHHhcccCCCccCCCCcCCCCCHHHHHHHHHH
Confidence                 99999999999999 99999999999999999999999999999999999999 889999999999999999999


Q ss_pred             hhchhcCCceeeCCCcC--------CCCCeeeeEEEeCCCCC--CcccccceecceeeeeeeCCHHHHHHHHhcCCCCce
Q 038617          306 LKDPLVADAIVHGGLLD--------KENLFIEPTILLDPPLD--AEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLA  375 (484)
Q Consensus       306 i~~a~~~~~~~~gg~~~--------~~g~~~~Ptil~~~~~~--~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~  375 (484)
                      |+++.+++++++||...        .+|+|++|||+.+++++  |.+++||+||||++|++|+|+||||+++|+++|||+
T Consensus       347 i~~a~~~A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~  426 (513)
T cd07128         347 VATLLAEAEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAATAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLV  426 (513)
T ss_pred             HHHHHhCCEEEECCCccccccCCCCCCCEEECCEEEeccCCcccchHHhCCCcCCeEEEEeeCCHHHHHHHHhcCCCCee
Confidence            99987668899998642        35899999999988874  899999999999999999999999999999999999


Q ss_pred             EEEecCCHHHHHHHhhccc--eeeEEECCCcc-------ccCCCCCCcccCCCCCCCCcc-hHHHHHHhhhccEEE
Q 038617          376 IYAFTKDETFKKQIVSGTS--SGSLIFNDTLV-------QQLCDVLPFGGVGQSGIGRYH-GHYSFETFSHEKAIM  441 (484)
Q Consensus       376 a~v~t~d~~~~~~~~~~l~--~g~v~iN~~~~-------~~~~~~~pfGG~~~SG~G~~~-g~~~~~~f~~~k~v~  441 (484)
                      +||||+|.+.+++++++++  +|+|+||+...       +...+.+||||+|.||+|+++ |.+++++|++.|+|.
T Consensus       427 asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~gg~~~l~~~~~~k~v~  502 (513)
T cd07128         427 ASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPLPQLVHGGPGRAGGGEELGGLRGVKHYMQRTAVQ  502 (513)
T ss_pred             EEEEeCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCCCCCCCCCCcccCCCCcccccHHHHHHhheeeeee
Confidence            9999999999999999997  99999998642       123467899999999999995 799999999999874


No 97 
>PRK10090 aldehyde dehydrogenase A; Provisional
Probab=100.00  E-value=4.6e-87  Score=683.05  Aligned_cols=400  Identities=24%  Similarity=0.366  Sum_probs=370.3

Q ss_pred             HHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHhhcCccccCccccCCCcceEEeecceEEE
Q 038617           34 LRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVL  113 (484)
Q Consensus        34 L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~  113 (484)
                      |++++++|++++++|++++++|+|||..++. .|+..+++.+++++...+.+.....   .....+...+++++|+|||+
T Consensus         1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~~~~~---~~~~~~~~~~~~~~P~Gvv~   76 (409)
T PRK10090          1 LRKIAAGIRERASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEII---QSDRPGENILLFKRALGVTT   76 (409)
T ss_pred             CHHHHHHHHHCHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccc---CCCCCCceeEEEEecccEEE
Confidence            5789999999999999999999999999998 4999999999999887766533211   11112335678999999999


Q ss_pred             EEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc-cCccceeeccC-ChhHHHHHHhCC-CCeEEE
Q 038617          114 ICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFF  190 (484)
Q Consensus       114 ~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~f  190 (484)
                      +|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++| +.+.+..|++|+ +|+|+|
T Consensus        77 ~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~f  156 (409)
T PRK10090         77 GILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSM  156 (409)
T ss_pred             EECCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEE
Confidence            999999999999999999999999999999999999999999999998 99999999999 567889999987 999999


Q ss_pred             eCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHH
Q 038617          191 TGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIE  270 (484)
Q Consensus       191 tGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~  270 (484)
                      |||+.+|+.|++.+++++||+++|+|||||+||++   |||++.|++.+++++|. |+||.|++++|+|||++++|+|++
T Consensus       157 tGs~~~g~~v~~~aa~~~~~~~lElgGk~p~iV~~---dADld~aa~~iv~~~f~-~~GQ~C~a~~rv~V~~~i~~~f~~  232 (409)
T PRK10090        157 TGSVSAGEKIMAAAAKNITKVCLELGGKAPAIVMD---DADLDLAVKAIVDSRVI-NSGQVCNCAERVYVQKGIYDQFVN  232 (409)
T ss_pred             ECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEEcC---CCCHHHHHHHHHHHHHH-hcCCCCCCCeEEEEcHHHHHHHHH
Confidence            99999999999999999999999999999999999   99999999999999999 999999999999999999999999


Q ss_pred             HHHHHHHhhcCCCC-CC-CCccccccCHHHHHHHHHHhhchhc-CCceeeCCCcCC-CCCeeeeEEEeCCCCCCcccccc
Q 038617          271 SLKTTIKKFYGENP-KD-SKSISRIINEYHFERLRKLLKDPLV-ADAIVHGGLLDK-ENLFIEPTILLDPPLDAEIMTEE  346 (484)
Q Consensus       271 ~l~~~~~~~~~g~~-~~-~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~gg~~~~-~g~~~~Ptil~~~~~~~~i~~eE  346 (484)
                      +|.++++++++||| ++ ++++||++++.+++++.++++++.+ |+++++||..+. .|+|++|||+.+++++|++++||
T Consensus       233 ~l~~~~~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE  312 (409)
T PRK10090        233 RLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEE  312 (409)
T ss_pred             HHHHHHHhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeCCCCCCHHHhCC
Confidence            99999999999999 66 8899999999999999999999864 778999997643 58899999999999999999999


Q ss_pred             eecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEEECCCccccCCCCCCcccCCCCCCCCcc
Q 038617          347 IFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYH  426 (484)
Q Consensus       347 ~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~  426 (484)
                      +||||++|++|+|+||||+++|+++|||+++|||+|.+.+.++++++++|.|+||+...+  .+..||||+|.||+|+++
T Consensus       313 ~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~pfGG~k~SG~G~~~  390 (409)
T PRK10090        313 TFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFE--AMQGFHAGWRKSGIGGAD  390 (409)
T ss_pred             CCCceEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCcCCcccccCCccc
Confidence            999999999999999999999999999999999999999999999999999999997764  345799999999999999


Q ss_pred             hHHHHHHhhhccEEEEe
Q 038617          427 GHYSFETFSHEKAIMQR  443 (484)
Q Consensus       427 g~~~~~~f~~~k~v~~~  443 (484)
                      |.+|+++|++.|++++.
T Consensus       391 g~~gl~~f~~~k~v~~~  407 (409)
T PRK10090        391 GKHGLHEYLQTQVVYLQ  407 (409)
T ss_pred             hHHHHHHhcceEEEEEe
Confidence            99999999999998764


No 98 
>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like. Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.
Probab=100.00  E-value=1.1e-86  Score=691.35  Aligned_cols=426  Identities=24%  Similarity=0.342  Sum_probs=391.1

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+++++++++|+++   |++++.++|.++|+++++.|++++++|++++++|+|||..++.. |+..+++.+++++..
T Consensus        17 ~~~~~~v~~av~~A~~~---~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~   92 (451)
T cd07146          17 AGTEEALREALALAASY---RSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDTRY-EVGRAADVLRFAAAE   92 (451)
T ss_pred             CCCHHHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence            47889999999999875   88899999999999999999999999999999999999999974 999999999999988


Q ss_pred             HHHhhcCccccCcc--ccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617           82 LDKWMAPKKRRLPL--LFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP  159 (484)
Q Consensus        82 ~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~  159 (484)
                      ...+.+... ....  ...+...++.++|+|||++|+|||||++++++++++||++||+||+|||+.+|.++..+.+++.
T Consensus        93 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~l~  171 (451)
T cd07146          93 ALRDDGESF-SCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLY  171 (451)
T ss_pred             HHHhcCccc-ccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHH
Confidence            766533221 1110  0123345789999999999999999999999999999999999999999999999999999999


Q ss_pred             cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHH
Q 038617          160 LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTV  236 (484)
Q Consensus       160 ~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa  236 (484)
                      ++ +|+|++|+++| +.+.++.|++|+ +|.|+||||+.+|+.|.+.++  .+|+++|+|||||+||++   |||++.|+
T Consensus       172 ~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~--~~~~~lElGG~~p~iV~~---daDl~~aa  246 (451)
T cd07146         172 EAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG--YKRQLLELGGNDPLIVMD---DADLERAA  246 (451)
T ss_pred             HcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhc--CCceeeecCCCceEEECC---CCCHHHHH
Confidence            98 99999999998 467799999997 999999999999999998775  689999999999999999   99999999


Q ss_pred             HHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCc
Q 038617          237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADA  314 (484)
Q Consensus       237 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~  314 (484)
                      +.+++++|. |+||.|+++++||||++++|+|+++|++++.++++|+| ++++++||++++.++++++++++++.. |++
T Consensus       247 ~~i~~~~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~  325 (451)
T cd07146         247 TLAVAGSYA-NSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIENRVEEAIAQGAR  325 (451)
T ss_pred             HHHHHHHHh-hCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCE
Confidence            999999999 99999999999999999999999999999999999999 888999999999999999999999864 778


Q ss_pred             eeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccc
Q 038617          315 IVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTS  394 (484)
Q Consensus       315 ~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~  394 (484)
                      +++||..  .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+++++++++
T Consensus       326 vl~gg~~--~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~  403 (451)
T cd07146         326 VLLGNQR--QGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRLVERLD  403 (451)
T ss_pred             EEeCCCc--CCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHCC
Confidence            9999864  48899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeEEECCCccccCCCCCCcccCCCCCC-CCcchHHHHHHhhhccEEE
Q 038617          395 SGSLIFNDTLVQQLCDVLPFGGVGQSGI-GRYHGHYSFETFSHEKAIM  441 (484)
Q Consensus       395 ~g~v~iN~~~~~~~~~~~pfGG~~~SG~-G~~~g~~~~~~f~~~k~v~  441 (484)
                      +|+|+||+.+. ...+.+||||+|.||+ |+++|.+|+++||+.|+++
T Consensus       404 ~G~v~iN~~~~-~~~~~~PfGG~k~SG~~g~~~g~~~~~~f~~~k~~~  450 (451)
T cd07146         404 VGTVNVNEVPG-FRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYS  450 (451)
T ss_pred             cceEEECCCCC-CCCCCCCcCcccccCCCcccChHHHHHHHhceeEEe
Confidence            99999998753 3456899999999995 8999999999999999874


No 99 
>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=100.00  E-value=4.1e-86  Score=690.76  Aligned_cols=430  Identities=27%  Similarity=0.420  Sum_probs=395.0

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+++++++++|++|++.|++++.++|.++|+++++.|++++++|++++++|+||+..++.. |+..+++.++++++.
T Consensus        17 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~   95 (453)
T cd07149          17 VASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDARK-EVDRAIETLRLSAEE   95 (453)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHH-HHHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999999999999999999999999999974 999999999999887


Q ss_pred             HHHhhcCccccCccc-cCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhcc
Q 038617           82 LDKWMAPKKRRLPLL-FFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPL  160 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~  160 (484)
                      ...+.+......... ..+...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.+++.+
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~Kps~~~p~~~~~l~~~l~~  175 (453)
T cd07149          96 AKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLE  175 (453)
T ss_pred             HHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHH
Confidence            766543221100000 1122457789999999999999999999999999999999999999999999999999999999


Q ss_pred             c-cCccceeeccCC-hhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHH
Q 038617          161 Y-LDCKAIKVTNGG-VDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVK  237 (484)
Q Consensus       161 a-lp~g~v~~v~g~-~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~  237 (484)
                      + +|+|++|+++|+ .+.+..|++|+ +|+|+||||+++|+.|++.++  ++|+++|+|||||+||++   |+|++.|++
T Consensus       176 ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~--~~~~~lelGGk~p~iV~~---dadl~~aa~  250 (453)
T cd07149         176 AGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG--LKKVTLELGSNAAVIVDA---DADLEKAVE  250 (453)
T ss_pred             cCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHcC--CCceeeecCCCceEEECC---CCCHHHHHH
Confidence            8 999999999984 45689999997 999999999999999998874  789999999999999999   999999999


Q ss_pred             HHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCce
Q 038617          238 RIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAI  315 (484)
Q Consensus       238 ~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~  315 (484)
                      .+++++|. |+||.|++++++|||++++|+|+++|++++.++++|+| ++++++||++++.+.+++.++++++.. ++++
T Consensus       251 ~i~~~~~~-~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v  329 (453)
T cd07149         251 RCVSGAFA-NAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAERIEEWVEEAVEGGARL  329 (453)
T ss_pred             HHHHHHHH-hcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHHHHHHHHHHHHHCCCEE
Confidence            99999999 99999999999999999999999999999999999999 888999999999999999999999864 6788


Q ss_pred             eeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccce
Q 038617          316 VHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS  395 (484)
Q Consensus       316 ~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~  395 (484)
                      ++||..  .|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++
T Consensus       330 ~~gg~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLt~~v~t~d~~~~~~~~~~l~~  407 (453)
T cd07149         330 LTGGKR--DGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKAARELEV  407 (453)
T ss_pred             EeCCCC--CCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCcCceEEEEcCCHHHHHHHHHHcCc
Confidence            899865  488999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617          396 GSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM  441 (484)
Q Consensus       396 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~  441 (484)
                      |+|+||+.+.. ..+.+||||+|.||+|+++|.+|+++|++.|++.
T Consensus       408 g~v~iN~~~~~-~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~~~  452 (453)
T cd07149         408 GGVMINDSSTF-RVDHMPYGGVKESGTGREGPRYAIEEMTEIKLVC  452 (453)
T ss_pred             CeEEECCCCCC-CCCCCCcCCccccccCCCChHHHHHHhhceeEEe
Confidence            99999987643 3568999999999999999999999999999875


No 100
>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain). This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.
Probab=100.00  E-value=4e-86  Score=691.92  Aligned_cols=416  Identities=22%  Similarity=0.330  Sum_probs=384.1

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++|+++|++||+.|+++|.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.+++++..
T Consensus        70 ~~~~~dv~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~i~~l~~~a~~  148 (500)
T TIGR01238        70 HANLAHVQAAIDSAQQAFPTWNATPAKERAAKLDRLADLLELHMPELMALCVREAGKTIHNAIA-EVREAVDFCRYYAKQ  148 (500)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence            5788999999999999999999999999999999999999999999999999999999999974 999999999999887


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      .+.+..               ...++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.+++.++
T Consensus       149 ~~~~~~---------------~~~~~P~GVV~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~a  213 (500)
T TIGR01238       149 VRDVLG---------------EFSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEA  213 (500)
T ss_pred             HHHhcC---------------ceeccCcceEEEECCCchHHHHHHHHHHHHHHcCCEEEEeCCCCccHHHHHHHHHHHHc
Confidence            755421               13589999999999999999999999999999999999999999999999999999998


Q ss_pred             -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccc---CceeeecCCcCceEEcCCCCCCCHHHH
Q 038617          162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHL---TPVTLELGGKCPAILDTLSSPLDIKVT  235 (484)
Q Consensus       162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~---~~~~lelgG~~p~iV~~~~~daDl~~a  235 (484)
                       +|+|++|+++| +.+.++.|+.|+ +|.|+||||+.+|+.|++.+++++   +|+++|+|||||+||++   |||++.|
T Consensus       214 GlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~~v~lElGGknp~IV~~---dAdld~A  290 (500)
T TIGR01238       214 GFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAPVPLIAETGGQNAMIVDS---TALPEQV  290 (500)
T ss_pred             CCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhcccCCceEEEecCCcCcEEECC---CCCHHHH
Confidence             99999999998 457889999987 999999999999999999998876   79999999999999999   9999999


Q ss_pred             HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CC
Q 038617          236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-AD  313 (484)
Q Consensus       236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~  313 (484)
                      ++.+++++|. |+||.|++++|||||++++|+|+++|++++.++++|+| ++++++||++++.+++++.++++++.+ ++
T Consensus       291 a~~i~~~~f~-nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga  369 (500)
T TIGR01238       291 VRDVLRSAFD-SAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQK  369 (500)
T ss_pred             HHHHHHHHHh-cCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCC
Confidence            9999999999 99999999999999999999999999999999999999 889999999999999999999998875 45


Q ss_pred             ceeeCCC---c-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeC--CHHHHHHHHhcCCCCceEEEecCCHHHHH
Q 038617          314 AIVHGGL---L-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLN--NIQESIEFINSRPKPLAIYAFTKDETFKK  387 (484)
Q Consensus       314 ~~~~gg~---~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~--~~~eai~~~n~~~~gl~a~v~t~d~~~~~  387 (484)
                      +++.++.   . ..+|+|++|||+.+  ++|.+++||+||||++|++|+  ++||||+++|+++|||++||||+|.+.+.
T Consensus       370 ~l~~~~~~~~~~~~~g~f~~PTvl~~--~~~~~~~eE~FgPvl~v~~~~~~~~deai~~~N~~~~gLs~~vfT~d~~~~~  447 (500)
T TIGR01238       370 KIAQLTLDDSRACQHGTFVAPTLFEL--DDIAELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETTYR  447 (500)
T ss_pred             EEEeeccCCCCCCCCCeeEcCEEEcc--CCchHhhCCCcCCEEEEEEeCCCCHHHHHHHHhCCCCCCeEEEEeCCHHHHH
Confidence            5543321   1 23689999999974  688899999999999999998  79999999999999999999999999999


Q ss_pred             HHhhccceeeEEECCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccE
Q 038617          388 QIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIG-RYHGHYSFETFSHEKA  439 (484)
Q Consensus       388 ~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~  439 (484)
                      ++++++++|+|+||+...+...+.+||||+|.||+| +.+|.+++++|++.|+
T Consensus       448 ~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~~~~~~~~k~  500 (500)
T TIGR01238       448 WIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAGGPHYLYRLTQVQY  500 (500)
T ss_pred             HHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCCHHHHHHHHhhcC
Confidence            999999999999998765544466899999999999 7999999999998773


No 101
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=100.00  E-value=4.7e-86  Score=709.61  Aligned_cols=430  Identities=20%  Similarity=0.238  Sum_probs=383.5

Q ss_pred             CCHHHHHHHHHHHHHH-hHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            3 AAMGEIEDKLAELRQT-FRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         3 ~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      ++ +|+++|+++|++| |+.|+++|.++|.++|++++++|++++++|++ +++|+|||+.+++. |+..+++.++++++.
T Consensus        34 ~~-~dv~~Av~~A~~aa~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~-~~~e~GK~~~~a~~-ev~~~~~~~~~~a~~  110 (663)
T TIGR02278        34 EG-LDVAAAVAWAREVGGPALRALTFHERARMLKALAQYLSERKEALYA-LAATTGATRRDNWV-DIDGGIGTLFTYSSL  110 (663)
T ss_pred             Cc-HHHHHHHHHHHHhcchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCHHHHHH-HHHHHHHHHHHHHHh
Confidence            45 5899999999996 99999999999999999999999999999999 59999999999975 999999999999988


Q ss_pred             HHHhhcCcc----ccC-ccccC-CCcceEEeecc-eEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHH
Q 038617           82 LDKWMAPKK----RRL-PLLFF-PASGEVVSEPF-GVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFL  154 (484)
Q Consensus        82 ~~~~~~~~~----~~~-~~~~~-~~~~~~~~~P~-GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l  154 (484)
                      .+++.....    ... +.... ....++.++|+ |||++|+|||||+.++++++++||++||+||+|||+.+|.++..+
T Consensus       111 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l  190 (663)
T TIGR02278       111 GRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFNFPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEAL  190 (663)
T ss_pred             hhhhccccccccCCceeccCCCCccceEEEEEeCCceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHH
Confidence            876431110    000 11111 12457899997 999999999999999999999999999999999999999999999


Q ss_pred             HHHhccc--cCccceeeccCChhHHHHHHhC-C-CCeEEEeCChHHHHHHHHHH--hcccCceeeecCCcCceEEcCCCC
Q 038617          155 AETIPLY--LDCKAIKVTNGGVDVCEQLLQQ-K-WNKIFFTGSPRVGSIVMSAA--AKHLTPVTLELGGKCPAILDTLSS  228 (484)
Q Consensus       155 ~~~l~~a--lp~g~v~~v~g~~~~~~~L~~~-~-vd~v~ftGs~~~g~~i~~~a--~~~~~~~~lelgG~~p~iV~~~~~  228 (484)
                      .+++.++  +|+|++|+++|+.  +. +..+ + +|+|+||||+++|+.|++.+  +++++|+++|||||||+||++   
T Consensus       191 ~~~~~~aG~lP~gv~~~v~g~~--~~-~~~~~~~~~~V~FTGS~~~G~~i~~~aaaa~~~~~~~lELGGk~p~IV~~---  264 (663)
T TIGR02278       191 VRTMVESGLLPEGSLQLICGSA--GD-LLDHLDHRDVVAFTGSAATADRLRAHPNVLERGIRFNAEADSLNAAILGE---  264 (663)
T ss_pred             HHHHHHhCCCCCCcEEEEeCCh--HH-HHhcCCCCCEEEEECCHHHHHHHHHhHhHHhcCceEEEEcCCCCeEEEcC---
Confidence            9999997  7999999999852  22 3333 4 89999999999999999864  478999999999999999999   


Q ss_pred             CCC-----HHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHH
Q 038617          229 PLD-----IKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERL  302 (484)
Q Consensus       229 daD-----l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~  302 (484)
                      |||     ++.|++.+++++|. |+||.|++++|||||++++|+|+++|.++++++++|+| ++++++||++++.+++++
T Consensus       265 dAd~~~~dl~~aa~~i~~~~f~-~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~~~~t~~Gpli~~~~~~~i  343 (663)
T TIGR02278       265 DATPDEPEFDLFAQEIVRELTI-KAGQKCTAIRRVIVPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLVSLEQRADV  343 (663)
T ss_pred             CCCccchhHHHHHHHHHHHHHh-cCCCCccCCceEEEeHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCCCHHHHHHH
Confidence            999     99999999999999 99999999999999999999999999999999999999 888999999999999999


Q ss_pred             HHHhhchhc-CCceeeCCCcCCCCCeeeeEEEeCCCCCC-cccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEec
Q 038617          303 RKLLKDPLV-ADAIVHGGLLDKENLFIEPTILLDPPLDA-EIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFT  380 (484)
Q Consensus       303 ~~~i~~a~~-~~~~~~gg~~~~~g~~~~Ptil~~~~~~~-~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t  380 (484)
                      +++|+++.+ |+++++||..+.+|+|++|||+.+++++| .+++||+||||++|++|+|++|||+++|+++|||++||||
T Consensus       344 ~~~i~~a~~~Ga~vl~GG~~~~~g~~~~PTvl~~~~~~~~~i~~eE~FGPVl~V~~~~~~~eai~~aN~~~~gL~a~vft  423 (663)
T TIGR02278       344 EAAVAALLAAGAEVRLGGPGRLDGAFFPPTLLLAEDPWAGAVHATEAFGPVATFFPYGDRAEAARLAARGGGSLVATLAT  423 (663)
T ss_pred             HHHHHHHHHCCCEEEECCCcCCCCeeEccEEEeeCCcchhhHHhccccCCeEEEEeeCCHHHHHHHHHcCCCCceEEEEe
Confidence            999999875 78999999765568999999999998876 7999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHhhcc--ceeeEEE-CCCc-----cc-cCCCCCCcccCCCCCCCCc-chHHHHHHhhhccEEEE
Q 038617          381 KDETFKKQIVSGT--SSGSLIF-NDTL-----VQ-QLCDVLPFGGVGQSGIGRY-HGHYSFETFSHEKAIMQ  442 (484)
Q Consensus       381 ~d~~~~~~~~~~l--~~g~v~i-N~~~-----~~-~~~~~~pfGG~~~SG~G~~-~g~~~~~~f~~~k~v~~  442 (484)
                      +|.+.++++++++  ++|+|+| |.+.     .+ ...+.+||||+|.||+|++ +|.+++++|++.|+|..
T Consensus       424 ~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~g~~~~l~~f~~~k~v~~  495 (663)
T TIGR02278       424 SDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPGRAGGGEELGGLRSVKHYMQRTAIQG  495 (663)
T ss_pred             CCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCCCCCCCCccCcCCCccchHHHHHHhceeEEEEc
Confidence            9999999999999  8999999 6421     11 1246789999999999999 46899999999999855


No 102
>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11. NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions.  This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3  and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.
Probab=100.00  E-value=9.2e-86  Score=690.31  Aligned_cols=431  Identities=27%  Similarity=0.395  Sum_probs=398.8

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCC-CHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITK-SVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALS   80 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~-~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~   80 (484)
                      .++.+|+++++++|++|++.|++. +.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.++++++
T Consensus        34 ~~~~~~v~~av~~A~~A~~~w~~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~  112 (473)
T cd07082          34 ALSALEILEAAETAYDAGRGWWPTMPLEERIDCLHKFADLLKENKEEVANLLMWEIGKTLKDALK-EVDRTIDYIRDTIE  112 (473)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHH-HHHHHHHHHHHHHH
Confidence            478899999999999999999988 9999999999999999999999999999999999999875 99999999999998


Q ss_pred             HHHHhhcCccccCccc--cCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHh
Q 038617           81 CLDKWMAPKKRRLPLL--FFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI  158 (484)
Q Consensus        81 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l  158 (484)
                      ..+++.+.... ....  ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.+++
T Consensus       113 ~~~~~~g~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~AL~aGN~vilKps~~~~~~~~~l~~~l  191 (473)
T cd07082         113 ELKRLDGDSLP-GDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGVLLGIPLAEAF  191 (473)
T ss_pred             HHHHhcCCccc-ccccccCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHH
Confidence            88776443211 1110  12345678999999999999999999999999999999999999999999999999999999


Q ss_pred             ccc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617          159 PLY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVT  235 (484)
Q Consensus       159 ~~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~a  235 (484)
                      .++ +|+|++|+++| +.+.++.|++|+ +|.|+||||+++|+.|.+.++  ++|+++|+|||||+||++   |||++.|
T Consensus       192 ~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~--~~~~~lelgg~n~~iV~~---dadl~~a  266 (473)
T cd07082         192 HDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKKQHP--MKRLVLELGGKDPAIVLP---DADLELA  266 (473)
T ss_pred             HHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhC--CCcEEEEcCCCCeEEECC---CCCHHHH
Confidence            997 99999999999 556789999887 999999999999999999876  799999999999999999   9999999


Q ss_pred             HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CC
Q 038617          236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-AD  313 (484)
Q Consensus       236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~  313 (484)
                      ++.+++++|. |+||.|+++++||||++++|+|+++|.+++.++++|+| ++++++||++++.+++++.++++++.. ++
T Consensus       267 a~~i~~~~~~-~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~ga  345 (473)
T cd07082         267 AKEIVKGALS-YSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGA  345 (473)
T ss_pred             HHHHHHHHHH-hCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCC
Confidence            9999999999 99999999999999999999999999999999999998 788999999999999999999998864 67


Q ss_pred             ceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcc
Q 038617          314 AIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGT  393 (484)
Q Consensus       314 ~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l  393 (484)
                      ++++||... .|+|+.|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+.++++++
T Consensus       346 ~~~~gg~~~-~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l  424 (473)
T cd07082         346 TVLNGGGRE-GGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINKARKLADAL  424 (473)
T ss_pred             EEEeCCccC-CCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhC
Confidence            899998764 3899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEE
Q 038617          394 SSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQ  442 (484)
Q Consensus       394 ~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~  442 (484)
                      ++|+|+||+++.+ ..+.+||||+|.||+|+++|.+|+++|++.|++++
T Consensus       425 ~~G~v~iN~~~~~-~~~~~pfGG~k~SG~g~~~g~~~l~~~~~~k~i~~  472 (473)
T cd07082         425 EVGTVNINSKCQR-GPDHFPFLGRKDSGIGTQGIGDALRSMTRRKGIVI  472 (473)
T ss_pred             CcceEEECCCCCC-CCCCCCCCcccccccCCCChHHHHHHhhceeEEEE
Confidence            9999999997754 34578999999999999999999999999999865


No 103
>PRK11903 aldehyde dehydrogenase; Provisional
Probab=100.00  E-value=5.2e-86  Score=692.78  Aligned_cols=431  Identities=19%  Similarity=0.232  Sum_probs=381.8

Q ss_pred             CHHHHHHHHHHHHHHh-HhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHH
Q 038617            4 AMGEIEDKLAELRQTF-RSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCL   82 (484)
Q Consensus         4 ~~~~v~~av~~A~~A~-~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~   82 (484)
                      +.+|+++|+++|++|+ +.|+++|+.+|.++|++++++|++++++|++++++|+|||+.+++. |+..+++.+++++...
T Consensus        38 ~~~dv~~Av~aA~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~a  116 (521)
T PRK11903         38 TGLDLAAAFAFAREQGGAALRALTYAQRAALLAAIVKVLQANRDAYYDIATANSGTTRNDSAV-DIDGGIFTLGYYAKLG  116 (521)
T ss_pred             ChHHHHHHHHHHHHhhhhhhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHH
Confidence            6689999999999995 9999999999999999999999999999999999999999999975 9999999999999887


Q ss_pred             HHhhcCccccCc--c--cc-CCCcceEEeec-ceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHH
Q 038617           83 DKWMAPKKRRLP--L--LF-FPASGEVVSEP-FGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAE  156 (484)
Q Consensus        83 ~~~~~~~~~~~~--~--~~-~~~~~~~~~~P-~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~  156 (484)
                      +.+.+.......  .  .. ......+.++| +|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|.+
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~  196 (521)
T PRK11903        117 AALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPAWGLWEKAAPALLAGVPVIVKPATATAWLTQRMVK  196 (521)
T ss_pred             HHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcchHHHHHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHH
Confidence            655322111000  0  00 11234677899 699999999999999999999999999999999999999999999999


Q ss_pred             Hhccc--cCccceeeccCC-hhHHHHHHhCCCCeEEEeCChHHHHHHHHHH--hcccCceeeecCCcCceEEcCCCCCCC
Q 038617          157 TIPLY--LDCKAIKVTNGG-VDVCEQLLQQKWNKIFFTGSPRVGSIVMSAA--AKHLTPVTLELGGKCPAILDTLSSPLD  231 (484)
Q Consensus       157 ~l~~a--lp~g~v~~v~g~-~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a--~~~~~~~~lelgG~~p~iV~~~~~daD  231 (484)
                      ++.++  +|+|++|+++|+ .+.++.|  ..+|.|.||||+.+|+.|++.+  +.+++|+++|+|||||+||++   |||
T Consensus       197 ~~~~ag~lP~gv~~~v~g~~~~~~~~l--~~v~~v~fTGS~~~G~~v~~~aa~~~~~~~~~lElGGknp~IV~~---dAd  271 (521)
T PRK11903        197 DVVAAGILPAGALSVVCGSSAGLLDHL--QPFDVVSFTGSAETAAVLRSHPAVVQRSVRVNVEADSLNSALLGP---DAA  271 (521)
T ss_pred             HHHHhCCCCcCceEEeeCCchHHHhcc--cCCCEEEEECCHHHHHHHHhhhhhhccCceeEeeccccCceEEcc---CCc
Confidence            99886  799999999984 4444444  3499999999999999999864  478999999999999999999   999


Q ss_pred             -----HHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHH
Q 038617          232 -----IKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKL  305 (484)
Q Consensus       232 -----l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~  305 (484)
                           ++.|++.+++++|. |+||.|++++|+|||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++
T Consensus       272 ~~~~~~~~aa~~i~~~~f~-~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~  350 (521)
T PRK11903        272 PGSEAFDLFVKEVVREMTV-KSGQKCTAIRRIFVPEALYDAVAEALAARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAG  350 (521)
T ss_pred             ccchhHHHHHHHHHHHHHh-ccCCCccCCeEEEEehhHHHHHHHHHHHHHHhccCCCCCCCcCccCCCCCHHHHHHHHHH
Confidence                 59999999999999 99999999999999999999999999999999999999 888999999999999999999


Q ss_pred             hhchhcCCceeeCCCcC-------CCCCeeeeEEEeCCCC--CCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceE
Q 038617          306 LKDPLVADAIVHGGLLD-------KENLFIEPTILLDPPL--DAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAI  376 (484)
Q Consensus       306 i~~a~~~~~~~~gg~~~-------~~g~~~~Ptil~~~~~--~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a  376 (484)
                      |+...+++++++||...       .+|+|++|||+.++++  ++.+++||+||||++|++|+|+||||+++|+++|||++
T Consensus       351 i~~~~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~i~~eE~FGPvl~V~~~~~~~eai~~~N~~~~gL~a  430 (521)
T PRK11903        351 LAALRAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAVHDVEVFGPVATLLPYRDAAHALALARRGQGSLVA  430 (521)
T ss_pred             HHHHhcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccchHHhCcccCCeEEEEeeCCHHHHHHHHhcCCCCceE
Confidence            98766688999998641       2488999999986654  46889999999999999999999999999999999999


Q ss_pred             EEecCCHHHHHHHhhcc--ceeeEEECCCcc-------ccCCCCCCcccCCCCCCCCcc-hHHHHHHhhhccEEE
Q 038617          377 YAFTKDETFKKQIVSGT--SSGSLIFNDTLV-------QQLCDVLPFGGVGQSGIGRYH-GHYSFETFSHEKAIM  441 (484)
Q Consensus       377 ~v~t~d~~~~~~~~~~l--~~g~v~iN~~~~-------~~~~~~~pfGG~~~SG~G~~~-g~~~~~~f~~~k~v~  441 (484)
                      ||||+|.+.+.++++++  ++|+|+||+.+.       ....+.+||||+|.||+|+++ |.+++++||+.|++.
T Consensus       431 svft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~~l~~~t~~~~~~  505 (521)
T PRK11903        431 SVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQSLHGGPGRAGGGEELGGLRALAFYHRRSAVQ  505 (521)
T ss_pred             EEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCCCCCCCCCCcCcCCcccccHHHHHHHhccceee
Confidence            99999999999999999  899999997542       113457899999999999995 589999999977654


No 104
>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=100.00  E-value=3.1e-85  Score=726.49  Aligned_cols=433  Identities=23%  Similarity=0.332  Sum_probs=401.8

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+++++|+++|++|++.|+.+|.++|.++|++++++|++++++|+.++++|+||+..++. .|+..+++.++|++..
T Consensus       581 ~a~~~~v~~Ai~aA~~A~~~W~~~~~~~Ra~iL~kaAdll~~~~~eL~~l~~~E~GK~~~~a~-~EV~eaid~lr~ya~~  659 (1038)
T PRK11904        581 FADAEQVEQALAAARAAFPAWSRTPVEERAAILERAADLLEANRAELIALCVREAGKTLQDAI-AEVREAVDFCRYYAAQ  659 (1038)
T ss_pred             CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence            478899999999999999999999999999999999999999999999999999999999996 5999999999999999


Q ss_pred             HHHhhcC-ccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhcc
Q 038617           82 LDKWMAP-KKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPL  160 (484)
Q Consensus        82 ~~~~~~~-~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~  160 (484)
                      .+++... ....   ...+..+..+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++.+
T Consensus       660 a~~~~~~~~~l~---g~~ge~n~~~~~P~GVv~~IsPwNfPlai~~~~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~e  736 (1038)
T PRK11904        660 ARRLFGAPEKLP---GPTGESNELRLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHE  736 (1038)
T ss_pred             HHHhhCCCcccC---CCCCceeEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHH
Confidence            8877532 1111   12355778899999999999999999999999999999999999999999999999999999999


Q ss_pred             c-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcc---cCceeeecCCcCceEEcCCCCCCCHHH
Q 038617          161 Y-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKH---LTPVTLELGGKCPAILDTLSSPLDIKV  234 (484)
Q Consensus       161 a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~---~~~~~lelgG~~p~iV~~~~~daDl~~  234 (484)
                      + +|+|++|+++| +.+.+..|++|+ ||.|+||||+.+|+.|.+.++.+   .+|+++|+|||||+||++   |||+|.
T Consensus       737 AGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~A~~~g~~~pvi~ElGGkNa~IV~~---dAdld~  813 (1038)
T PRK11904        737 AGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPIVPLIAETGGQNAMIVDS---TALPEQ  813 (1038)
T ss_pred             hCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhccCCCceEEEEcCCcCeEEECC---CCCHHH
Confidence            8 99999999999 456899999997 99999999999999999988765   689999999999999999   999999


Q ss_pred             HHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhcCC
Q 038617          235 TVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLVAD  313 (484)
Q Consensus       235 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~~~  313 (484)
                      |++.+++|+|. |+||.|++++++|||++++|+|+++|+++++++++|+| +.++++||+|++.+++++.++|+++.+++
T Consensus       814 Av~~iv~saF~-~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vGdp~d~~t~~GPvI~~~a~~~l~~~I~~a~~ga  892 (1038)
T PRK11904        814 VVDDVVTSAFR-SAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIERMKREA  892 (1038)
T ss_pred             HHHHHHHHHHh-CCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccCCCcccccCCccCCCCHHHHHHHHHHHHHHHcCC
Confidence            99999999999 99999999999999999999999999999999999999 88999999999999999999999988788


Q ss_pred             ceeeCCCcCC---CCCeeeeEEEeCCCCCCcccccceecceeeeeeeC--CHHHHHHHHhcCCCCceEEEecCCHHHHHH
Q 038617          314 AIVHGGLLDK---ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLN--NIQESIEFINSRPKPLAIYAFTKDETFKKQ  388 (484)
Q Consensus       314 ~~~~gg~~~~---~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~--~~~eai~~~n~~~~gl~a~v~t~d~~~~~~  388 (484)
                      ++++||..++   +|+|+.|||+..  +++.+++||+||||++|++|+  +++|||+++|+++|||+++|||+|.+.+++
T Consensus       893 ~vl~gg~~~~~~~~G~fv~PTvi~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~~IfS~d~~~~~~  970 (1038)
T PRK11904        893 RLLAQLPLPAGTENGHFVAPTAFEI--DSISQLEREVFGPILHVIRYKASDLDKVIDAINATGYGLTLGIHSRIEETADR  970 (1038)
T ss_pred             EEEeCCCCCCCCCCceEEeeEEEcc--CCcHHhCCCCcCcEEEEEEeCCCCHHHHHHHHhCCCCCCEEEEEcCCHHHHHH
Confidence            9999987643   499999999963  577789999999999999998  699999999999999999999999999999


Q ss_pred             HhhccceeeEEECCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEec
Q 038617          389 IVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIG-RYHGHYSFETFSHEKAIMQRS  444 (484)
Q Consensus       389 ~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~~  444 (484)
                      +++++++|+||||+.+++...+.+||||+|.||+| +.+|++++.+|++.|+|.++.
T Consensus       971 ~~~~l~aG~vyIN~~~~ga~vg~qPFGG~~~SG~G~kaGG~~~L~~f~~~ktv~~~~ 1027 (1038)
T PRK11904        971 IADRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGTGPKAGGPHYLLRFATEKTVTVNT 1027 (1038)
T ss_pred             HHHhCCEEEEEEeCCCccCCCCCCCCCCCCCCCCCCccchHHHHHHHhceEEEEEcc
Confidence            99999999999999877666677899999999999 578899999999999998764


No 105
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=100.00  E-value=8.8e-85  Score=704.39  Aligned_cols=429  Identities=21%  Similarity=0.289  Sum_probs=381.5

Q ss_pred             HHHHHHHHHHHHH-hHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHH
Q 038617            6 GEIEDKLAELRQT-FRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDK   84 (484)
Q Consensus         6 ~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~   84 (484)
                      +|+++|+++|++| ++.|+++++.+|.++|++++++|++++++|++ ++.|+|||..+++. |+..+++.+++++...++
T Consensus        40 ~dv~~Av~~A~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~-l~~e~GK~~~~a~~-ev~~~~~~~~~~a~~~~~  117 (675)
T PRK11563         40 LDFAAALAYAREVGGPALRALTFHERAAMLKALAKYLLERKEELYA-LSAQTGATRRDSWI-DIEGGIGTLFTYASKGRR  117 (675)
T ss_pred             HHHHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHH-HHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHhh
Confidence            6999999999998 79999999999999999999999999999998 59999999999985 999999999999988765


Q ss_pred             hhcCcc----ccC-ccccCC-CcceEEeecc-eEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHH
Q 038617           85 WMAPKK----RRL-PLLFFP-ASGEVVSEPF-GVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAET  157 (484)
Q Consensus        85 ~~~~~~----~~~-~~~~~~-~~~~~~~~P~-GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~  157 (484)
                      ......    ... +....+ ...++.++|+ |||++|+|||||+.++++++++||++||+||+|||+.+|+++..|+++
T Consensus       118 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~GVv~~I~PwNfP~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~  197 (675)
T PRK11563        118 ELPNDTVLVEGEVEPLSKGGTFAGRHILTPLEGVAVHINAFNFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRL  197 (675)
T ss_pred             hccccccccCCccccccCCCcccceEEEeecCceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHH
Confidence            432110    000 111111 1246788997 999999999999999999999999999999999999999999999999


Q ss_pred             hccc--cCccceeeccCChhHHHHHHhC-C-CCeEEEeCChHHHHHHHHH--HhcccCceeeecCCcCceEEcCCCCCCC
Q 038617          158 IPLY--LDCKAIKVTNGGVDVCEQLLQQ-K-WNKIFFTGSPRVGSIVMSA--AAKHLTPVTLELGGKCPAILDTLSSPLD  231 (484)
Q Consensus       158 l~~a--lp~g~v~~v~g~~~~~~~L~~~-~-vd~v~ftGs~~~g~~i~~~--a~~~~~~~~lelgG~~p~iV~~~~~daD  231 (484)
                      +.++  +|+|++|+++|+..  + +..+ + +|.|.||||+++|+.|++.  ++++++|+++|||||||+||++   |||
T Consensus       198 ~~eaG~~P~gv~~vv~g~~~--~-~~~~~~~i~~v~FTGS~~~G~~i~~~~~a~~~~~~~~lELGGknp~IV~~---DAd  271 (675)
T PRK11563        198 IVESGLLPEGALQLICGSAG--D-LLDHLDGQDVVTFTGSAATAQKLRAHPNVVANSVPFTAEADSLNAAILGP---DAT  271 (675)
T ss_pred             HHHcCCCCCCcEEEeeCCHH--H-HhhcCCCCCEEEEECcHHHHHHHHhhhhhhhCCceEEEecCCcCceEECC---CCC
Confidence            9986  89999999998522  2 3333 3 8999999999999999985  4588999999999999999999   995


Q ss_pred             -----HHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHH
Q 038617          232 -----IKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKL  305 (484)
Q Consensus       232 -----l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~  305 (484)
                           +|.|++.+++++|. |+||.|++++|+|||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++
T Consensus       272 ~~~~dld~aa~~i~~~~f~-~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~  350 (675)
T PRK11563        272 PGTPEFDLFVKEVVREMTV-KAGQKCTAIRRAIVPRALVDAVIEALRARLAKVVVGDPRLEGVRMGALASLEQREDVREK  350 (675)
T ss_pred             cCchhHHHHHHHHHHHHHH-hCCCccccceeEEeeHHHHHHHHHHHHHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHH
Confidence                 99999999999999 99999999999999999999999999999999999999 889999999999999999999


Q ss_pred             hhchhcCCceeeCCCcC--------CCCCeeeeEEEeCCCC--CCcccccceecceeeeeeeCCHHHHHHHHhcCCCCce
Q 038617          306 LKDPLVADAIVHGGLLD--------KENLFIEPTILLDPPL--DAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLA  375 (484)
Q Consensus       306 i~~a~~~~~~~~gg~~~--------~~g~~~~Ptil~~~~~--~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~  375 (484)
                      |+++.+.+++++||...        .+|+|++|||+.++++  ++.+++||+||||++|++|+|+||||+++|+++|||+
T Consensus       351 i~~a~~~a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~~~~~i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~  430 (675)
T PRK11563        351 VAALLAAAEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLEAPAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLV  430 (675)
T ss_pred             HHHHHhCCEEEECCcccccccCCCCCCCeeECCEEEeccCchhhhhHhhccccCCceEEEecCCHHHHHHHHhcCCCCce
Confidence            99997668999998521        3589999999999998  5799999999999999999999999999999999999


Q ss_pred             EEEecCCHHHHHHHhhccc--eeeEEECCCcc------cc-CCCCCCcccCCCCCCCCc-chHHHHHHhhhccEEEEe
Q 038617          376 IYAFTKDETFKKQIVSGTS--SGSLIFNDTLV------QQ-LCDVLPFGGVGQSGIGRY-HGHYSFETFSHEKAIMQR  443 (484)
Q Consensus       376 a~v~t~d~~~~~~~~~~l~--~g~v~iN~~~~------~~-~~~~~pfGG~~~SG~G~~-~g~~~~~~f~~~k~v~~~  443 (484)
                      +||||+|.+.+.+++++++  +|.|+||+.+.      +. ..+.+||||+|.||+|++ +|.+++++|++.|++...
T Consensus       431 asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~~g~~~~~~f~~~k~~~~~  508 (675)
T PRK11563        431 ASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHGSPLPQLVHGGPGRAGGGEELGGLRGVKHYMQRTAVQGS  508 (675)
T ss_pred             EEEEeCCHHHHHHHHHHHHhcCCEEEEcCccccccccCCCCCCcCCCcCCCCCCCCCccccchhHHHHhheeeeeecC
Confidence            9999999999999999997  99999997531      11 236789999999999999 469999999999998653


No 106
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=100.00  E-value=1.7e-82  Score=709.89  Aligned_cols=416  Identities=22%  Similarity=0.340  Sum_probs=386.1

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+|+++|+++|++|++.|+.+|.++|.++|++++++|++++++|+.++++|+||+..++. .|+..+++.++|++..
T Consensus       678 ~a~~~dv~~Av~aA~~A~~~W~~~p~~eRa~iL~r~Adlle~~~~eL~~l~~~EaGKt~~~A~-~EV~eaidflryyA~~  756 (1318)
T PRK11809        678 EATPAEVEQALESAVNAAPIWFATPPAERAAILERAADLMEAQMQTLMGLLVREAGKTFSNAI-AEVREAVDFLRYYAGQ  756 (1318)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence            478899999999999999999999999999999999999999999999999999999999996 4999999999999887


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      .+..+               ....++|+|||++|+|||||+.++++++++||++||+||+|||+++|+++..+++++.++
T Consensus       757 a~~~~---------------~~~~~~PlGVV~~IsPWNFPlai~~g~iaaALaAGN~VV~KPseqTpl~a~~lv~ll~eA  821 (1318)
T PRK11809        757 VRDDF---------------DNDTHRPLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEA  821 (1318)
T ss_pred             HHHhc---------------CCceeecccEEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCcHHHHHHHHHHHHHh
Confidence            65421               124689999999999999999999999999999999999999999999999999999999


Q ss_pred             -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccc------CceeeecCCcCceEEcCCCCCCCH
Q 038617          162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHL------TPVTLELGGKCPAILDTLSSPLDI  232 (484)
Q Consensus       162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~------~~~~lelgG~~p~iV~~~~~daDl  232 (484)
                       +|+|++|+++| +.+++..|+.|+ ||.|+||||+++|+.|.+.+++++      +|+++|+|||||+||++   |||+
T Consensus       822 GlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~aA~~l~~~g~~~pliaElGGkNa~IVds---dAdl  898 (1318)
T PRK11809        822 GVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQGRPIPLIAETGGQNAMIVDS---SALT  898 (1318)
T ss_pred             CcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHHHhhhcccccCceeEEEecCCccceEECC---CCCH
Confidence             99999999999 556899999997 999999999999999999988775      79999999999999999   9999


Q ss_pred             HHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc
Q 038617          233 KVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV  311 (484)
Q Consensus       233 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~  311 (484)
                      |.|++.+++|+|. ++||+|++.+++|||++++|+|+++|+++++++++|+| +.++++||+|++.+.+++.++|+++.+
T Consensus       899 e~Av~~iv~sAF~-~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~vGdP~~~~tdvGPvId~~a~~~i~~~I~~a~~  977 (1318)
T PRK11809        899 EQVVADVLASAFD-SAGQRCSALRVLCLQDDVADRTLKMLRGAMAECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRA  977 (1318)
T ss_pred             HHHHHHHHHHHHh-cCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcCCCCcccccCCcCCCCCHHHHHHHHHHHHHHHH
Confidence            9999999999999 99999999999999999999999999999999999999 789999999999999999999999875


Q ss_pred             -CCceeeCCCcC----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeC--CHHHHHHHHhcCCCCceEEEecCCHH
Q 038617          312 -ADAIVHGGLLD----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLN--NIQESIEFINSRPKPLAIYAFTKDET  384 (484)
Q Consensus       312 -~~~~~~gg~~~----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~--~~~eai~~~n~~~~gl~a~v~t~d~~  384 (484)
                       |+.++.||...    ..|+|+.|||+..  +++.++++|+||||++|++|+  ++||+|+++|+++|||+++|||+|.+
T Consensus       978 ~G~~v~~g~~~~~~~~~~G~fv~PTIi~~--~~~~~l~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~gV~Srd~~ 1055 (1318)
T PRK11809        978 KGRPVFQAARENSEDWQSGTFVPPTLIEL--DSFDELKREVFGPVLHVVRYNRNQLDELIEQINASGYGLTLGVHTRIDE 1055 (1318)
T ss_pred             cCCEEEecCCCCCCCCCCCeEEeeEEEec--cchhhhcCcccCceEEEEEeCCCCHHHHHHHHhcCCCCceEEEEeCCHH
Confidence             55677766432    3599999999974  567889999999999999996  79999999999999999999999999


Q ss_pred             HHHHHhhccceeeEEECCCccccCCCCCCcccCCCCCCCC-cchHHHHHHhhhccE
Q 038617          385 FKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGR-YHGHYSFETFSHEKA  439 (484)
Q Consensus       385 ~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~-~~g~~~~~~f~~~k~  439 (484)
                      .++++++++++|+||||+...+...+.+||||+|.||+|. .+|++++..|+..+.
T Consensus      1056 ~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~kaGGp~yL~~f~~~~~ 1111 (1318)
T PRK11809       1056 TIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLATRP 1111 (1318)
T ss_pred             HHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCCCCCCHHHHHHHhccCC
Confidence            9999999999999999998776555678999999999994 689999999998874


No 107
>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate.  The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.
Probab=100.00  E-value=5.4e-82  Score=655.31  Aligned_cols=411  Identities=19%  Similarity=0.248  Sum_probs=364.6

Q ss_pred             CCCHHHHHHHHHHHHHHhHhc--CCCCHHHH----HHHHHHHHHHHHhc--HHHHHHHHHHHcCCChhhhhHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSG--ITKSVAWR----KNQLRALIELLQDN--EDKIFKALHQDLGKHPVETYRDEIGLIKK   73 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w--~~~~~~~R----~~~L~~~a~~l~~~--~~~la~~~~~e~Gk~~~ea~~~ev~~~~~   73 (484)
                      .++.+|+++|+++|++||+.|  +.++..+|    .++|.++++.|+++  .++|++++++|+|||+.+++ .|+..+++
T Consensus        30 ~a~~~dv~~Av~aA~~A~~~W~~~~~~~~~R~l~~~~il~~~a~~l~~~~~~~~la~~~~~e~GK~~~~a~-~Ev~~~~~  108 (489)
T cd07126          30 DTDEDEINEFVDSLRQCPKSGLHNPLKNPERYLLYGDVSHRVAHELRKPEVEDFFARLIQRVAPKSDAQAL-GEVVVTRK  108 (489)
T ss_pred             CCCHHHHHHHHHHHHHHHHhccccCCCHHHHhhhHHHHHHHHHHHHHcCCCHHHHHHHHHHHcCCCHHHHH-HHHHHHHH
Confidence            578999999999999999998  55779999    89999999999998  59999999999999999997 49999999


Q ss_pred             HHHHHHHHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHH
Q 038617           74 SAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASF  153 (484)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~  153 (484)
                      .+++++....++.+... ..+....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus       109 ~~~~~a~~~~~~~g~~~-~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP~~l~~~~ia~ALaaGN~VVlKPSe~tp~~~~~  187 (489)
T cd07126         109 FLENFAGDQVRFLARSF-NVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVDSKVSVVMEQ  187 (489)
T ss_pred             HHHHHHHHHHHhcCcee-ccCCCCCCceeEEEEecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHH
Confidence            99999987766543221 00111123466889999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhccc-cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCC-
Q 038617          154 LAETIPLY-LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPL-  230 (484)
Q Consensus       154 l~~~l~~a-lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~da-  230 (484)
                      |++++.++ +|+|++|+++|+.+.+..|+.|+ +|+|+||||+++|+.|...++   +++++|+|||||+||++   || 
T Consensus       188 l~~~~~~aGlP~gv~~vv~G~~~~~~~l~~~~~v~~V~FTGS~~vGr~i~~~~g---~k~~lElgg~~~~IV~~---Da~  261 (489)
T cd07126         188 FLRLLHLCGMPATDVDLIHSDGPTMNKILLEANPRMTLFTGSSKVAERLALELH---GKVKLEDAGFDWKILGP---DVS  261 (489)
T ss_pred             HHHHHHHhCcCcCcEEEEeCCchhHHHHhcCCCCCEEEEECCHHHHHHHHHHhC---CCEEeecCCCCceEECC---Ccc
Confidence            99999998 99999999999544466688776 999999999999999988766   67999999999999999   99 


Q ss_pred             CHHHHHHHHHHhhcccCCCCccccCCceEEccch-HHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhch
Q 038617          231 DIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKF-AATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDP  309 (484)
Q Consensus       231 Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i-~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a  309 (484)
                      |+|.|++.+++++|. |+||.|++++|+|||+++ +|+|+++|++.++++++++    +++||+++.. .+++.++++++
T Consensus       262 dld~a~~~~~~g~f~-naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~~g~----~~~Gpli~~~-~~~v~~~i~~a  335 (489)
T cd07126         262 DVDYVAWQCDQDAYA-CSGQKCSAQSILFAHENWVQAGILDKLKALAEQRKLED----LTIGPVLTWT-TERILDHVDKL  335 (489)
T ss_pred             cHHHHHHHHHHHHHh-cCCCcCCCCceEEEeCcchHHHHHHHHHHHHHhcccCC----CcCCCCcCHH-HHHHHHHHHHH
Confidence            999999999999999 999999999999999995 6899999999999988763    5899999998 89999999998


Q ss_pred             h--cCCceeeCCCcCC-----CC-CeeeeEEEeC------CCCCCcccccceecceeeeeeeCC--HHHHHHHHhcCCCC
Q 038617          310 L--VADAIVHGGLLDK-----EN-LFIEPTILLD------PPLDAEIMTEEIFGPILPIITLNN--IQESIEFINSRPKP  373 (484)
Q Consensus       310 ~--~~~~~~~gg~~~~-----~g-~~~~Ptil~~------~~~~~~i~~eE~fgPvl~v~~~~~--~~eai~~~n~~~~g  373 (484)
                      .  +|+++++||..+.     .+ .|++|||+..      ++++|++++||+||||++|++|+|  +||||+++|+++||
T Consensus       336 ~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~~~deai~~aN~~~~g  415 (489)
T cd07126         336 LAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFGPFQVVTEYKDEQLPLVLEALERMHAH  415 (489)
T ss_pred             HhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHhCCCcCCEEEEEEECCCCHHHHHHHHhCCCCC
Confidence            6  4789999997632     23 3899999852      578999999999999999999999  99999999999999


Q ss_pred             ceEEEecCCHHHHHHHhhccceee--EEECCCccccCCC---CCCcccCCCCCCCCcch
Q 038617          374 LAIYAFTKDETFKKQIVSGTSSGS--LIFNDTLVQQLCD---VLPFGGVGQSGIGRYHG  427 (484)
Q Consensus       374 l~a~v~t~d~~~~~~~~~~l~~g~--v~iN~~~~~~~~~---~~pfGG~~~SG~G~~~g  427 (484)
                      |++||||+|.++++++++++++|+  |+||..+.+. ..   ..||||+|.||+|+++.
T Consensus       416 L~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~-~~~~~~~pfgg~k~sg~g~~~~  473 (489)
T cd07126         416 LTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGA-PQNHWFGPAGDPRGAGIGTPEA  473 (489)
T ss_pred             ceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCC-CcccCcCCCCCCcccCCCCHhH
Confidence            999999999999999999999999  6699877653 33   39999999999998754


No 108
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=100.00  E-value=5.6e-82  Score=707.82  Aligned_cols=421  Identities=21%  Similarity=0.339  Sum_probs=389.2

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+++++|++.|++|++.|+.+|.++|.++|++++++|++++++|+.++++|+||+..++. .|+..+++.++|++..
T Consensus       586 ~a~~~~v~~Av~aA~~A~~~W~~~~~~~Ra~iL~raAdll~~~~~eL~~l~~~E~GKt~~ea~-~Ev~eaid~lr~ya~~  664 (1208)
T PRK11905        586 EASAEDVERALAAAQAAFPEWSATPAAERAAILERAADLMEAHMPELFALAVREAGKTLANAI-AEVREAVDFLRYYAAQ  664 (1208)
T ss_pred             CCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence            478899999999999999999999999999999999999999999999999999999999996 5999999999999987


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY  161 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a  161 (484)
                      .+.+..               ...++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..++++|.++
T Consensus       665 a~~~~~---------------~~~~~P~GVv~~IsPwNfPlai~~g~i~aALaaGN~VV~KPse~tpl~a~~l~~ll~eA  729 (1208)
T PRK11905        665 ARRLLN---------------GPGHKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLLHEA  729 (1208)
T ss_pred             HHHhcC---------------CceecCccEEEEEcCCcCHHHHHHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHHHHHc
Confidence            765421               13578999999999999999999999999999999999999999999999999999999


Q ss_pred             -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcc---cCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617          162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKH---LTPVTLELGGKCPAILDTLSSPLDIKVT  235 (484)
Q Consensus       162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~---~~~~~lelgG~~p~iV~~~~~daDl~~a  235 (484)
                       +|+|++|+++| +.+++..|++|+ |+.|+||||+.+|+.|.+.++.+   .+|+++|+|||||+||++   |||+|.|
T Consensus       730 GlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~A~~~~~~~pli~ElGGkN~~IV~~---dAdle~A  806 (1208)
T PRK11905        730 GVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPLIAETGGQNAMIVDS---SALPEQV  806 (1208)
T ss_pred             CCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHHHhhcCCCCeEEEecCCcCeEEEcC---CCCHHHH
Confidence             99999999999 556899999997 99999999999999999998876   389999999999999999   9999999


Q ss_pred             HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhcCCc
Q 038617          236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLVADA  314 (484)
Q Consensus       236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~~~~  314 (484)
                      ++.+++|+|. ++||.|++++++|||++++|+|+++|+++++++++||| +.++++||+|++.+.+++.++|+++.+.+.
T Consensus       807 v~~iv~saF~-~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vGdP~d~~t~~GPvId~~a~~~i~~~I~~a~~~G~  885 (1208)
T PRK11905        807 VADVIASAFD-SAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRAAGR  885 (1208)
T ss_pred             HHHHHHHHHh-cCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCCCchhccCCccCccCHHHHHHHHHHHHHHHHCCC
Confidence            9999999999 99999999999999999999999999999999999999 889999999999999999999999876554


Q ss_pred             -eeeCCCcC--CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeC--CHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 038617          315 -IVHGGLLD--KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLN--NIQESIEFINSRPKPLAIYAFTKDETFKKQI  389 (484)
Q Consensus       315 -~~~gg~~~--~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~--~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~  389 (484)
                       +..|+...  .+|+|+.|||+..  +++.++++|+||||++|++|+  ++||+|+++|+++|||+++|||+|.+.++++
T Consensus       886 ~l~~g~~~~~~~~G~fv~PTVl~~--~~~~~~~eEiFGPVL~V~~y~~~dldeaI~~iN~t~yGLt~~I~S~d~~~~~~~  963 (1208)
T PRK11905        886 LVHQLPLPAETEKGTFVAPTLIEI--DSISDLEREVFGPVLHVVRFKADELDRVIDDINATGYGLTFGLHSRIDETIAHV  963 (1208)
T ss_pred             EEEEccCCCCCCCCeEEeeEEEec--CChHHhcCCccCceEEEEEeCCCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHH
Confidence             44443221  4699999999973  578889999999999999997  7999999999999999999999999999999


Q ss_pred             hhccceeeEEECCCccccCCCCCCcccCCCCCCCC-cchHHHHHHhhhccEEEEec
Q 038617          390 VSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGR-YHGHYSFETFSHEKAIMQRS  444 (484)
Q Consensus       390 ~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~-~~g~~~~~~f~~~k~v~~~~  444 (484)
                      ++++++|+||||+..++...+.+||||+|.||+|. .+|++++.+|++.|++....
T Consensus       964 ~~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~kaGGp~~L~~f~~~k~v~~~~ 1019 (1208)
T PRK11905        964 TSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGPKAGGPLYLGRLVREAPTPIPP 1019 (1208)
T ss_pred             HHhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCCcCCCHHHHHHHhhcceeeccc
Confidence            99999999999998876656778999999999995 88999999999999987653


No 109
>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase. Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.
Probab=100.00  E-value=1e-80  Score=646.70  Aligned_cols=416  Identities=20%  Similarity=0.262  Sum_probs=366.9

Q ss_pred             HHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHh--
Q 038617            8 IEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKW--   85 (484)
Q Consensus         8 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~--   85 (484)
                      +++|++.|++|+++|+++|.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++.+++++..+++.  
T Consensus         1 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~~-~ev~~~~~~l~~~a~~~~~~~~   79 (454)
T cd07129           1 VDAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQ-GELGRTTGQLRLFADLVREGSW   79 (454)
T ss_pred             ChHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHH-HHHHHHHHHHHHHHHHHHhcCC
Confidence            478999999999999999999999999999999999999999999999999998886 59999999999999877642  


Q ss_pred             hcCccccC-cc--ccCCCcceEEeecceEEEEEccCchhHHH--HHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc-
Q 038617           86 MAPKKRRL-PL--LFFPASGEVVSEPFGVVLICSAWNFPINL--ALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP-  159 (484)
Q Consensus        86 ~~~~~~~~-~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~--~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~-  159 (484)
                      ........ +.  ...+...+++++|+|||++|+|||||+.+  .++++++||++||+||+|||+.+|.++.++++++. 
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~~~  159 (454)
T cd07129          80 LDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRA  159 (454)
T ss_pred             ccccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHH
Confidence            11111000 00  01123457889999999999999999987  55899999999999999999999999999988874 


Q ss_pred             ---cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhc--ccCceeeecCCcCceEEcCCCCCC-
Q 038617          160 ---LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAK--HLTPVTLELGGKCPAILDTLSSPL-  230 (484)
Q Consensus       160 ---~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~--~~~~~~lelgG~~p~iV~~~~~da-  230 (484)
                         ++ +|+|++|+++| +.+.+..|++|+ ||.|+||||+.+|+.|++.+++  ++||+++|+|||||+||++   |+ 
T Consensus       160 ~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~---da~  236 (454)
T cd07129         160 ALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILP---GAL  236 (454)
T ss_pred             HHHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeC---Ccc
Confidence               66 99999999999 557899999998 9999999999999999999987  6999999999999999999   99 


Q ss_pred             --CHHHHHHHHHHhhcccCCCCccccCCceEEccc-hHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhh
Q 038617          231 --DIKVTVKRIIGGKFASCNGQVCVGVDYILVEKK-FAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLK  307 (484)
Q Consensus       231 --Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~  307 (484)
                        |++.|++.+++++|. |+||.|++++|||||++ ++|+|+++|+++++++++         ||++++.+.++..+.++
T Consensus       237 ~~dl~~aa~~i~~~~~~-~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~---------g~~~~~~~~~~~~~~i~  306 (454)
T cd07129         237 AERGEAIAQGFVGSLTL-GAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPA---------QTMLTPGIAEAYRQGVE  306 (454)
T ss_pred             hHHHHHHHHHHHHHHhc-CCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCC---------CCCcChHHHHHHHHHHH
Confidence              899999999999999 99999999999999999 999999999999998764         46666666677777777


Q ss_pred             chhc--CCceeeCCCcCCCCCeeeeEEEeCCC---CCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCC
Q 038617          308 DPLV--ADAIVHGGLLDKENLFIEPTILLDPP---LDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKD  382 (484)
Q Consensus       308 ~a~~--~~~~~~gg~~~~~g~~~~Ptil~~~~---~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d  382 (484)
                      ++.+  ++++++||..+.+|+|++|||+...+   ++|++++||+||||++|++|+|.||+|+++|+++|||++||||+|
T Consensus       307 ~a~~~~ga~~l~gg~~~~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d  386 (454)
T cd07129         307 ALAAAPGVRVLAGGAAAEGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEE  386 (454)
T ss_pred             HHHhcCCcEEEeCCCcCCCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccC
Confidence            7653  67899999765568999999998655   689999999999999999999999999999999999999999999


Q ss_pred             --HHHHHHHhhcc--ceeeEEECCCccccC-CCCCCccc-CCCCCCCCc--chHHHHHHhhhc
Q 038617          383 --ETFKKQIVSGT--SSGSLIFNDTLVQQL-CDVLPFGG-VGQSGIGRY--HGHYSFETFSHE  437 (484)
Q Consensus       383 --~~~~~~~~~~l--~~g~v~iN~~~~~~~-~~~~pfGG-~~~SG~G~~--~g~~~~~~f~~~  437 (484)
                        .+.++++++++  ++|+|+||+++.+.. .+.+|||| +|.||.|++  +|.+++++||++
T Consensus       387 ~~~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~~~~~g~~~~~~~~~~  449 (454)
T cd07129         387 DDLALARELLPVLERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPRFTSVGTAAIERFLRP  449 (454)
T ss_pred             chHHHHHHHHHHHHhhCcEEEECCCCccccccCCCCCCCCcCCCCCCccccccHHHHHHhccc
Confidence              79999999999  699999998765432 25899999 999999999  799999999954


No 110
>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like. ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.
Probab=100.00  E-value=2.7e-80  Score=641.00  Aligned_cols=417  Identities=18%  Similarity=0.206  Sum_probs=368.4

Q ss_pred             HHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHhh-c
Q 038617            9 EDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWM-A   87 (484)
Q Consensus         9 ~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~-~   87 (484)
                      ++|+++|++|++.|+++|.++|.++|++++++|++++++|++++++|+|||. +.. .|+..+++.+++++.....+. .
T Consensus         2 ~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~-~ev~~~i~~~~~~~~~~~~~~~~   79 (442)
T cd07084           2 ERALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MFA-ENICGDQVQLRARAFVIYSYRIP   79 (442)
T ss_pred             hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hhh-hhhcchHHHHHHHHHHHHhcccc
Confidence            6799999999999999999999999999999999999999999999999999 665 499999999999988776431 1


Q ss_pred             CccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc-c-Ccc
Q 038617           88 PKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY-L-DCK  165 (484)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a-l-p~g  165 (484)
                      ...............+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+.+++.++ + |+|
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P~g  159 (442)
T cd07084          80 HEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPE  159 (442)
T ss_pred             ccccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCCcc
Confidence            11110100111235688999999999999999999999999999999999999999999999999999999998 6 999


Q ss_pred             ceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCC-CHHHHHHHHHHhh
Q 038617          166 AIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPL-DIKVTVKRIIGGK  243 (484)
Q Consensus       166 ~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~da-Dl~~aa~~i~~~~  243 (484)
                      ++|+++|+.+.+..|++|+ +|+|+||||+++|+.|++.++.  +|+++|+|||||+||++   || |++.|++.+++++
T Consensus       160 ~~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~--~~v~lElgG~~~~iV~~---dadd~~~a~~~i~~~~  234 (442)
T cd07084         160 DVTLINGDGKTMQALLLHPNPKMVLFTGSSRVAEKLALDAKQ--ARIYLELAGFNWKVLGP---DAQAVDYVAWQCVQDM  234 (442)
T ss_pred             ceEEeeCCcHHHHHHHcCCCCCEEEEECCHHHHHHHHHhccC--CcEEEeccCcCcEEECC---ChhhHHHHHHHHHHHH
Confidence            9999999656888999997 9999999999999999998865  89999999999999999   99 6999999999999


Q ss_pred             cccCCCCccccCCceEEccc-hHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCCCcC
Q 038617          244 FASCNGQVCVGVDYILVEKK-FAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLD  322 (484)
Q Consensus       244 ~~~~~Gq~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~~~  322 (484)
                      |. |+||.|++++++|||++ ++|+|+++|.++++++++|    ++.+||++++...+++.+.+++.  ++++++||...
T Consensus       235 ~~-~~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g----~~~~gpl~~~~~~~~i~~a~~~g--ga~~~~gg~~~  307 (442)
T cd07084         235 TA-CSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE----DLLLGPVQTFTTLAMIAHMENLL--GSVLLFSGKEL  307 (442)
T ss_pred             hc-ccCCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccC----ccccChhhhHHHHHHHHHHHhcC--CcEEEeCCccc
Confidence            99 99999999999999999 9999999999999999887    67899998876666655555431  36888998642


Q ss_pred             -------CCCCeeeeEEEeCCCCCC---cccccceecceeeeeeeCC--HHHHHHHHhcCCCCceEEEecCCHHHHHHHh
Q 038617          323 -------KENLFIEPTILLDPPLDA---EIMTEEIFGPILPIITLNN--IQESIEFINSRPKPLAIYAFTKDETFKKQIV  390 (484)
Q Consensus       323 -------~~g~~~~Ptil~~~~~~~---~i~~eE~fgPvl~v~~~~~--~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~  390 (484)
                             ..|+|++|||+.+++++|   ++++||+||||++|++|+|  ++|||+++|+++|||++||||+|.+.+++++
T Consensus       308 ~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~  387 (442)
T cd07084         308 KNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELI  387 (442)
T ss_pred             ccCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHHHHH
Confidence                   148999999999999997   9999999999999999999  9999999999999999999999999999999


Q ss_pred             hcc-ceeeEEECCCccccCCCCCCccc-CCCCCCCCcc-hHHHHHHhhhccE
Q 038617          391 SGT-SSGSLIFNDTLVQQLCDVLPFGG-VGQSGIGRYH-GHYSFETFSHEKA  439 (484)
Q Consensus       391 ~~l-~~g~v~iN~~~~~~~~~~~pfGG-~~~SG~G~~~-g~~~~~~f~~~k~  439 (484)
                      +++ ++|+|+||+.++....+..|||| .|.||+|++. |.+++++|++...
T Consensus       388 ~~l~~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~~~~g~~~~~~~~~~~~  439 (442)
T cd07084         388 GNLWVAGRTYAILRGRTGVAPNQNHGGGPAADPRGAGIGGPEAIKLVWRCHA  439 (442)
T ss_pred             HHHHhcCeEEECCCCCCCccccccCCCCCCCCCCCccccchHHhhheeeeee
Confidence            999 99999999763223455677766 8899999986 9999999997654


No 111
>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family. The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of  endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an  important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in  metabolic pathways, or as  binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme  is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer
Probab=100.00  E-value=1.5e-79  Score=638.19  Aligned_cols=424  Identities=33%  Similarity=0.466  Sum_probs=396.2

Q ss_pred             HHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHhhcC
Q 038617            9 EDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAP   88 (484)
Q Consensus         9 ~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~   88 (484)
                      +++++.|++|++.|++++.++|.++|+++++.|.+++++|+++++.|+||+..+.. .|+..++..+++++...+++.+.
T Consensus         1 ~~av~~a~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~~-~ei~~~i~~l~~~~~~~~~~~~~   79 (432)
T cd07078           1 DAAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEAL-GEVARAADTFRYYAGLARRLHGE   79 (432)
T ss_pred             CHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCc
Confidence            36899999999999999999999999999999999999999999999999887775 59999999999999888877654


Q ss_pred             ccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc-cCccce
Q 038617           89 KKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY-LDCKAI  167 (484)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a-lp~g~v  167 (484)
                      ..   .....+.....+++|+|||++|+|||||+..+++.+++||++||+||+|||+.+|.++..+.++|.++ +|++++
T Consensus        80 ~~---~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~~  156 (432)
T cd07078          80 VI---PSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVL  156 (432)
T ss_pred             cc---cccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcCcE
Confidence            32   11123456788999999999999999999999999999999999999999999999999999999999 899999


Q ss_pred             eeccCCh-hHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHhhcc
Q 038617          168 KVTNGGV-DVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFA  245 (484)
Q Consensus       168 ~~v~g~~-~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~~~~  245 (484)
                      ++++|+. +.+..|+.|+ +|.|.||||..+++.|.+.++++++|+++|+||+||+||++   |+|++.|++.+++++|.
T Consensus       157 ~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~~~~~~~~e~gg~~~~iV~~---~ad~~~aa~~i~~~~~~  233 (432)
T cd07078         157 NVVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFD---DADLDAAVKGAVFGAFG  233 (432)
T ss_pred             EEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhccCcEEEecCCCCeeEECC---CCCHHHHHHHHHHHHHh
Confidence            9999854 4788899987 89999999999999999999999999999999999999999   99999999999999999


Q ss_pred             cCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchh-cCCceeeCCCcCC
Q 038617          246 SCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPL-VADAIVHGGLLDK  323 (484)
Q Consensus       246 ~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~-~~~~~~~gg~~~~  323 (484)
                       ++||.|++++++|||++++|+|+++|++++.++++|+| ++++++||++++.+.+++.++++++. .++++++||..+.
T Consensus       234 -~~Gq~C~a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~  312 (432)
T cd07078         234 -NAGQVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLE  312 (432)
T ss_pred             -ccCCCccCCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCC
Confidence             99999999999999999999999999999999999999 89999999999999999999999876 4678999987654


Q ss_pred             --CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEEEC
Q 038617          324 --ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFN  401 (484)
Q Consensus       324 --~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN  401 (484)
                        .|+|+.|||+.+++++++++++|+||||++|++|+++||||+++|+.++||++||||+|.+.++++++++++|+|+||
T Consensus       313 ~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~~~~g~v~iN  392 (432)
T cd07078         313 GGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWIN  392 (432)
T ss_pred             CCCCcEEccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhcCcceEEEC
Confidence              489999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617          402 DTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM  441 (484)
Q Consensus       402 ~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~  441 (484)
                      +.+.+ ..+.+||||+|.||+|+++|++|+++|++.|+++
T Consensus       393 ~~~~~-~~~~~pfgG~~~sg~g~~~g~~~~~~~~~~k~v~  431 (432)
T cd07078         393 DYSVG-AEPSAPFGGVKQSGIGREGGPYGLEEYTEPKTVT  431 (432)
T ss_pred             CCCCC-CCCCCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence            98875 5789999999999999999999999999999874


No 112
>KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00  E-value=4.3e-81  Score=590.82  Aligned_cols=465  Identities=28%  Similarity=0.427  Sum_probs=426.2

Q ss_pred             CCCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHH
Q 038617            1 MAAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALS   80 (484)
Q Consensus         1 ~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~   80 (484)
                      |+-++.|+|+.+..|++|+++|.+.+...|.++|+.+.+.+-+|.|.+++..++|+||+..++..+||-.+++.+.|.+.
T Consensus        81 p~~~~tdide~v~la~kAQktW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtGKTmvDAs~GEIlvTlEKI~Wtl~  160 (583)
T KOG2454|consen   81 PALSPTDIDERVTLARKAQKTWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTGKTMVDASLGEILVTLEKITWTLS  160 (583)
T ss_pred             ccCChhhHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccCchhhhhhHhHHHHHHHHhhhhhh
Confidence            45678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhcc
Q 038617           81 CLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPL  160 (484)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~  160 (484)
                      +.++|+++...+......-...+++++|+||+..|.|||||+.+.+.+++.||.+||++|+|-|+.+..+.....|+++.
T Consensus       161 ~Ger~L~P~~Rpn~~~~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGNaIVvK~SE~~~WS~~fy~e~ir~  240 (583)
T KOG2454|consen  161 EGERWLKPESRPNGRAMLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSGNAIVVKVSEHASWSGCFYFEIIRA  240 (583)
T ss_pred             cchhhcCCcCCCchhheeeccceEEEeecceEEEeeecCCchhhhhhHHHHHHhcCCeEEEEeecceeeehhhHHHHHHH
Confidence            99999988765433222233568999999999999999999999999999999999999999999999999988888776


Q ss_pred             c-----cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHH
Q 038617          161 Y-----LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKV  234 (484)
Q Consensus       161 a-----lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~  234 (484)
                      +     -|++++|++++-.+.+++|.+|+ +++|.|.||..+++.|++.++++++|+++|||||+++||++   |+|++.
T Consensus       241 ~L~a~g~~p~LVq~itclpd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk~LTPv~lELGGKDafIi~d---da~l~~  317 (583)
T KOG2454|consen  241 ALAAVGAPPNLVQVITCLPDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAKTLTPVTLELGGKDAFIICD---DADLSH  317 (583)
T ss_pred             HHHHcCCCcchhheeecCcchHhHhhcCCCcceEEEecCcHHHHHHHHhhhhhcCcEEEeecCcccEEEec---cccHHH
Confidence            4     59999999999789999999997 99999999999999999999999999999999999999999   999999


Q ss_pred             HHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-C
Q 038617          235 TVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-A  312 (484)
Q Consensus       235 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~  312 (484)
                      .+.-+++|.|. .+||.|++.+|++||+++||.|+..|.+++..++.|.| ....|||.+++..+++.++.++++|.+ |
T Consensus       318 v~si~mRGtfQ-SsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMGAm~s~nrfdhLesLv~DAv~KG  396 (583)
T KOG2454|consen  318 VASIAMRGTFQ-SSGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMGAMCSQNRFDHLESLVNDAVDKG  396 (583)
T ss_pred             HHHHHHhhhhh-hcCCcccceeEEEEecchHHHHHHHHHHHHHHHHcCCCccCccchhhhhhccchHHHHHHHHHHHhhc
Confidence            99999999999 99999999999999999999999999999999999988 788999999999999999999999985 6


Q ss_pred             CceeeCCCc-----CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHH
Q 038617          313 DAIVHGGLL-----DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKK  387 (484)
Q Consensus       313 ~~~~~gg~~-----~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~  387 (484)
                      +++++||.+     .+.|.|+.||++.+++++|+|++||.||||+++..+++.|++|+++|+++|||.++||+.|..+++
T Consensus       397 Arl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh~i~lAN~s~fgLG~sVFg~dk~~c~  476 (583)
T KOG2454|consen  397 ARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEHVIKLANDSRFGLGCSVFGGDKHRCK  476 (583)
T ss_pred             chhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCChHHHHhhccCCcccccceeccccHHHHH
Confidence            899999975     256899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecC-----cCCCCCCCCCCchHHH-
Q 038617          388 QIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSF-----FLELEPRYPPWNDFKM-  461 (484)
Q Consensus       388 ~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~-----~~~~~~~~~p~~~~~~-  461 (484)
                      +++.+++.|.|.||+....+. -++||||++.||+|+.+|.+|++...+.|+|.+..+     ..+..+.||=|...|- 
T Consensus       477 y~a~~lqtG~vAiNDFasfY~-cQlPFGG~k~SGyGrFaG~EGLrg~Cn~Ksv~yd~~~~~~t~ip~aldypi~~s~kaW  555 (583)
T KOG2454|consen  477 YIASQLQTGVVAINDFASFYM-CQLPFGGVKDSGYGRFAGIEGLRGCCNVKSVAYDRVAENATEIPEALDYPIYGSLKAW  555 (583)
T ss_pred             HHHhhhhccceeehhhhhhhe-eccccCCccCCCccccccHHHHHHHhcccceeccchhhhhccCCccccccCcChhhHH
Confidence            999999999999999776543 459999999999999999999999999999977643     2356677877765444 


Q ss_pred             HHHHHHhhh
Q 038617          462 KFLRLAYDF  470 (484)
Q Consensus       462 ~~~~~~~~~  470 (484)
                      .++|+|..-
T Consensus       556 ~fvrsli~~  564 (583)
T KOG2454|consen  556 DFVRSLIDV  564 (583)
T ss_pred             HHHHHHHHH
Confidence            455666543


No 113
>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA.  This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium.  Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.
Probab=100.00  E-value=1.8e-79  Score=630.26  Aligned_cols=388  Identities=18%  Similarity=0.212  Sum_probs=338.4

Q ss_pred             HHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHH
Q 038617            5 MGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDK   84 (484)
Q Consensus         5 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~   84 (484)
                      -+|+++|+++|++||+.|++++.++|.++|++++++|+++.++|++++++|+|||..++..       +.++++.+....
T Consensus         3 ~~~v~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~-------~~~~~~~~~~~~   75 (429)
T cd07121           3 FATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDKI-------AKNHLAAEKTPG   75 (429)
T ss_pred             hhhHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH-------HHHHHHHHhcCc
Confidence            3789999999999999999999999999999999999999999999999999999877643       444554432211


Q ss_pred             hhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc----c
Q 038617           85 WMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP----L  160 (484)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~----~  160 (484)
                      .  ...............+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.    +
T Consensus        76 ~--~~~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~~  153 (429)
T cd07121          76 T--EDLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAE  153 (429)
T ss_pred             c--cccccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHHH
Confidence            0  000000001112345788899999999999999999999999999999999999999999999999999885    5


Q ss_pred             c-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHH
Q 038617          161 Y-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVK  237 (484)
Q Consensus       161 a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~  237 (484)
                      + +|+|++|+++| +.+.++.|++|+ ||.|+||||+.+|+.|++.    .||+++|+|||||+||++   |||++.|++
T Consensus       154 aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~----~k~~~lelGGk~p~iV~~---dADld~Aa~  226 (429)
T cd07121         154 AGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS----GKKAIGAGAGNPPVVVDE---TADIEKAAR  226 (429)
T ss_pred             cCCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC----CCceEeecCCCceEEEec---CCCHHHHHH
Confidence            5 89999999998 567899999998 9999999999999999875    499999999999999999   999999999


Q ss_pred             HHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhc---CCc
Q 038617          238 RIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLV---ADA  314 (484)
Q Consensus       238 ~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~---~~~  314 (484)
                      .+++++|. |+||.|++++|+|||+++||+|+++|+++ .             .+++++++.+++.++++++.+   +++
T Consensus       227 ~i~~~~~~-n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~-~-------------~~~i~~~~~~~v~~~i~~a~~~~~ga~  291 (429)
T cd07121         227 DIVQGASF-DNNLPCIAEKEVIAVDSVADYLIAAMQRN-G-------------AYVLNDEQAEQLLEVVLLTNKGATPNK  291 (429)
T ss_pred             HHHhcccc-cCCCCCCccceEEEeHHHHHHHHHHHHHC-C-------------CEEcCHHHHHHHHHhhcccCCCccccc
Confidence            99999999 99999999999999999999999999876 1             147899999999999998865   367


Q ss_pred             eeeCCCc----CCCCCeee---eEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCc--eEEEecCCHHH
Q 038617          315 IVHGGLL----DKENLFIE---PTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPL--AIYAFTKDETF  385 (484)
Q Consensus       315 ~~~gg~~----~~~g~~~~---Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl--~a~v~t~d~~~  385 (484)
                      ++.||..    +..|+|+.   |||+.+++++|++++||+||||++|++|+|+||||+++|+++|||  +++|||+|.++
T Consensus       292 ~~~gg~~~~~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~  371 (429)
T cd07121         292 KWVGKDASKILKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVEN  371 (429)
T ss_pred             cccCcCHHHHHHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHH
Confidence            8888753    12477877   599999999999999999999999999999999999999999998  99999999999


Q ss_pred             HHHHhhccceeeEEECCCccccCCCCCCcccCCCCCC--CCcch
Q 038617          386 KKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGI--GRYHG  427 (484)
Q Consensus       386 ~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~--G~~~g  427 (484)
                      ++++++++++|+|+||+++.    +.+||||+|.|++  |..-|
T Consensus       372 a~~~a~~l~aG~v~iN~~~~----~~~p~gG~k~s~~~~~~~~~  411 (429)
T cd07121         372 LTKMARAMQTTIFVKNGPSY----AGLGVGGEGYTTFTIAGPTG  411 (429)
T ss_pred             HHHHHhhCCceEEEEcCCCc----CccccCCCccceEEecCCcC
Confidence            99999999999999997643    5689999999998  54434


No 114
>PRK15398 aldehyde dehydrogenase EutE; Provisional
Probab=100.00  E-value=1.6e-78  Score=627.91  Aligned_cols=403  Identities=16%  Similarity=0.209  Sum_probs=346.0

Q ss_pred             CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      ....+|+++++++|++||++|+.++.++|.++|++++++|++++++|++++++|+||+..+++.       ..++++++.
T Consensus        32 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~-------~~~~~~~~~  104 (465)
T PRK15398         32 MGVFASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI-------AKNVAAAEK  104 (465)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH-------HHHHHHHHH
Confidence            3457899999999999999999999999999999999999999999999999999999888764       334444443


Q ss_pred             HH--HhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617           82 LD--KWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP  159 (484)
Q Consensus        82 ~~--~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~  159 (484)
                      ..  .+....    .....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.
T Consensus       105 ~~~~~~~~~~----~~~~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~  180 (465)
T PRK15398        105 TPGVEDLTTE----ALTGDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLN  180 (465)
T ss_pred             hccccccccC----cccCCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHH
Confidence            32  111111    011122356788899999999999999999999999999999999999999999999999999986


Q ss_pred             ----cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCH
Q 038617          160 ----LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDI  232 (484)
Q Consensus       160 ----~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl  232 (484)
                          ++ +|+|++|+++| +.+.++.|++|+ ||+|+||||+++|+.|++    ..+|+++|+|||||+||++   |||+
T Consensus       181 ~~l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~----~~k~~~~elGGk~p~IV~~---dADl  253 (465)
T PRK15398        181 EAIVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK----SGKKAIGAGAGNPPVVVDE---TADI  253 (465)
T ss_pred             HHHHHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH----cCCceeeecCCCceEEEec---CCCH
Confidence                45 89999999998 667899999998 999999999999999988    3599999999999999999   9999


Q ss_pred             HHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchh-c
Q 038617          233 KVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPL-V  311 (484)
Q Consensus       233 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~-~  311 (484)
                      +.|++.+++++|. |+||.|++++|||||+++||+|+++|+++.              +|++++.+++++.++++++. +
T Consensus       254 d~Aa~~i~~g~~~-n~GQ~C~A~~rvlV~~si~d~f~~~l~~~~--------------~~li~~~~~~~v~~~l~~~~~~  318 (465)
T PRK15398        254 EKAARDIVKGASF-DNNLPCIAEKEVIVVDSVADELMRLMEKNG--------------AVLLTAEQAEKLQKVVLKNGGT  318 (465)
T ss_pred             HHHHHHHHHhccc-CCCCcCCCCceEEEeHHHHHHHHHHHHHcC--------------CccCCHHHHHHHHHHHhhcccc
Confidence            9999999999999 999999999999999999999999998761              27999999999999998653 2


Q ss_pred             CCceeeCCCc----CCCCCee---eeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCc--eEEEecCC
Q 038617          312 ADAIVHGGLL----DKENLFI---EPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPL--AIYAFTKD  382 (484)
Q Consensus       312 ~~~~~~gg~~----~~~g~~~---~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl--~a~v~t~d  382 (484)
                      +++++.||..    ...|+++   .|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||  ++||||+|
T Consensus       319 ~~~~~~g~~~~~i~~~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d  398 (465)
T PRK15398        319 VNKKWVGKDAAKILEAAGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRN  398 (465)
T ss_pred             cchhhhCCCHHHHHHhCCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCC
Confidence            3356666532    1236665   3799999999999999999999999999999999999999999988  99999999


Q ss_pred             HHHHHHHhhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617          383 ETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR  443 (484)
Q Consensus       383 ~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~  443 (484)
                      .++++++++++++|+|+||+++.    +.+||||+|.|.+- .+|+.| ...|..|++..+
T Consensus       399 ~~~a~~~a~~l~~G~V~iN~~~~----~~~p~gg~~~s~~~-~~~~~g-~~~~~~~~~~~~  453 (465)
T PRK15398        399 VDNLNKMARAIQTSIFVKNGPSY----AGLGLGGEGFTTFT-IATPTG-EGVTSARTFTRR  453 (465)
T ss_pred             HHHHHHHHHhCCceEEEECCCCc----cccCcCCCCCceee-ecccCC-CCccchhhhhhh
Confidence            99999999999999999997642    57899999999852 236666 666666655443


No 115
>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.
Probab=100.00  E-value=3.9e-78  Score=620.04  Aligned_cols=407  Identities=15%  Similarity=0.162  Sum_probs=340.6

Q ss_pred             HHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHhhc
Q 038617            8 IEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMA   87 (484)
Q Consensus         8 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~   87 (484)
                      +++|+++|++||+.|+++|+++|.++|++++++|++++++|+++++.|+|||+.+++. ++........  ..   .+..
T Consensus         1 ~~~Ai~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~~-~~~~~~~~~~--~~---~~~~   74 (439)
T cd07081           1 LDDAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDKV-IKNHFAAEYI--YN---VYKD   74 (439)
T ss_pred             CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHH-HHHHHHHHHH--HH---HHhc
Confidence            4789999999999999999999999999999999999999999999999999998874 5443332111  11   1111


Q ss_pred             CccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc----cc-c
Q 038617           88 PKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP----LY-L  162 (484)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~----~a-l  162 (484)
                      ...........+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.    ++ +
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~  154 (439)
T cd07081          75 EKTCGVLTGDENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGA  154 (439)
T ss_pred             cccCceecCCCCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCC
Confidence            110001011113345789999999999999999999999999999999999999999999999999999885    55 9


Q ss_pred             CccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHH
Q 038617          163 DCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRII  240 (484)
Q Consensus       163 p~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~  240 (484)
                      |+|++|+++| +.+.++.|++|+ ||+|.||||+.    +++.+++++||+++|+|||||+||++   |||++.|++.++
T Consensus       155 P~gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~----v~~~aa~~~k~~~lElGGk~p~IV~~---dADl~~Aa~~iv  227 (439)
T cd07081         155 PENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPA----VVKAAYSSGKPAIGVGAGNTPVVIDE---TADIKRAVQSIV  227 (439)
T ss_pred             ChhhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHH----HHHHHHhcCCCEEEEcCCCCeEEEcC---CCCHHHHHHHHH
Confidence            9999999998 667899999998 99999999997    56677788999999999999999999   999999999999


Q ss_pred             HhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCCC
Q 038617          241 GGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGL  320 (484)
Q Consensus       241 ~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~  320 (484)
                      +++|. |+||.|++.+|+|||+++||+|+++|+++.              ||+++.++++++.++|+++.+.+..+.||.
T Consensus       228 ~~~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~--------------gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~  292 (439)
T cd07081         228 KSKTF-DNGVICASEQSVIVVDSVYDEVMRLFEGQG--------------AYKLTAEELQQVQPVILKNGDVNRDIVGQD  292 (439)
T ss_pred             HHHhc-CCCCCCCCCCEEEEcHHHHHHHHHHHHHcC--------------CccCCHHHHHHHHHHHHhcCCcCCcccCCC
Confidence            99999 999999999999999999999999998763              799999999999999999875433445553


Q ss_pred             c----CCCCCeeeeE---EEeCCC--CCCcccccceecceeeeeeeCCHHHHHHHHhcC----CCCceEEEecCC---HH
Q 038617          321 L----DKENLFIEPT---ILLDPP--LDAEIMTEEIFGPILPIITLNNIQESIEFINSR----PKPLAIYAFTKD---ET  384 (484)
Q Consensus       321 ~----~~~g~~~~Pt---il~~~~--~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~----~~gl~a~v~t~d---~~  384 (484)
                      .    ...|+|+.||   ++.+++  ++|++++||+||||++|++|+|+||||+++|++    +|||+++|||+|   .+
T Consensus       293 ~~~~~~~~G~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~  372 (439)
T cd07081         293 AYKIAAAAGLKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIE  372 (439)
T ss_pred             HHHHHHHcCCccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHH
Confidence            2    1248899998   998888  999999999999999999999999999999965    899999999999   99


Q ss_pred             HHHHHhhccceeeEEECCCc-cccCCCCCCcccCCCC--CCCCcchH-----HHHHHhhhccEEEE
Q 038617          385 FKKQIVSGTSSGSLIFNDTL-VQQLCDVLPFGGVGQS--GIGRYHGH-----YSFETFSHEKAIMQ  442 (484)
Q Consensus       385 ~~~~~~~~l~~g~v~iN~~~-~~~~~~~~pfGG~~~S--G~G~~~g~-----~~~~~f~~~k~v~~  442 (484)
                      +++++++++++|+|+||.++ ++.....--|||+..+  |.|..+|.     .+..+|++.|.+.+
T Consensus       373 ~a~~~a~~l~~G~V~iN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  438 (439)
T cd07081         373 NMNQFANAMKTSRFVKNGPCSQGGLGDLYNFRGWPSMTLGCGTWGGNSVSENVGPKHLVNLKTVAL  438 (439)
T ss_pred             HHHHHHhhCCceEEEEeCCccccccccccCCCCCeeEeeecCCCCCCCcCCCCChHhhheeeeeec
Confidence            99999999999999999876 4333334456676654  33443333     34677887776653


No 116
>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278.
Probab=100.00  E-value=1.6e-76  Score=618.48  Aligned_cols=425  Identities=17%  Similarity=0.176  Sum_probs=353.2

Q ss_pred             HHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhH-H---HHHHHHHHHHHHHHHHH
Q 038617            8 IEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYR-D---EIGLIKKSAKYALSCLD   83 (484)
Q Consensus         8 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~-~---ev~~~~~~~~~~~~~~~   83 (484)
                      .++++++|++||+.|+++++.+|.++|++++++|+++.++|+++++.|+|||..++.. +   ++...++.+++++....
T Consensus        86 ~~~av~aA~~A~~~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a~e~gkp~~~~r~i~~~~~~~~~~~  165 (551)
T TIGR02288        86 GDALLDAAHAALPGWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMAFQAGGPHAQDRGLEAVAYAYREMS  165 (551)
T ss_pred             HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHhccChHHHHHHHHHHHHHHHHHH
Confidence            4899999999999999999999999999999999999999999999999999988741 1   66777888999888776


Q ss_pred             HhhcCccccCccccCC---CcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHH----HHHH
Q 038617           84 KWMAPKKRRLPLLFFP---ASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECAS----FLAE  156 (484)
Q Consensus        84 ~~~~~~~~~~~~~~~~---~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~----~l~~  156 (484)
                      ++.+......+....+   .....+++|+|||++|+|||||+++.++++++||++||+||+|||+.+|+++.    .+.+
T Consensus       166 ~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN~VVlKPs~~tpl~~~~~~~~l~e  245 (551)
T TIGR02288       166 RIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNPVLVKPHPGAILPLALTVQVARE  245 (551)
T ss_pred             hccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCCeEEEECCcccchhHHHHHHHHHH
Confidence            6543211000100001   12235789999999999999999999999999999999999999999998655    6678


Q ss_pred             Hhccc-cCccceeeccC--ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCH
Q 038617          157 TIPLY-LDCKAIKVTNG--GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDI  232 (484)
Q Consensus       157 ~l~~a-lp~g~v~~v~g--~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl  232 (484)
                      ++.++ +|+|+||+++|  +.+.++.|+.|+ |+.|.||||+.+|+.|.+.++  .+++++|+|||||+||++   |+|+
T Consensus       246 ~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa--~~~v~lElGGknp~IV~~---dADl  320 (551)
T TIGR02288       246 VLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNAR--QAQVYTEKAGVNTVIIES---TDDY  320 (551)
T ss_pred             HHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhcc--cCcEEeecCCcCeEEEcC---CCCH
Confidence            89898 99999999998  357899999998 999999999999999998876  489999999999999999   9999


Q ss_pred             HHHHHHHHHhhcccCCCCccccCCceEEccc---------hHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHH
Q 038617          233 KVTVKRIIGGKFASCNGQVCVGVDYILVEKK---------FAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERL  302 (484)
Q Consensus       233 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~---------i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~  302 (484)
                      +.|++.+++++|. |+||.|++++|+|||++         +||+|++.|++++.++ +||| ++.+++||++++.+++++
T Consensus       321 d~aa~~i~~~~f~-~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-vGdp~~~~~~~Gplis~~~~~ri  398 (551)
T TIGR02288       321 KAMLRNLAFSLSL-YSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGL-LGDPARATAVLGAIQSPDTLARI  398 (551)
T ss_pred             HHHHHHHHHHHHh-hCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHh-cCCcccccccccCcCCHHHHHHH
Confidence            9999999999999 99999999999999999         7999999999999999 8998 778899999999999997


Q ss_pred             HHHhhchhcCCceeeCCCcC----CCC-CeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcC--CCC-c
Q 038617          303 RKLLKDPLVADAIVHGGLLD----KEN-LFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSR--PKP-L  374 (484)
Q Consensus       303 ~~~i~~a~~~~~~~~gg~~~----~~g-~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~--~~g-l  374 (484)
                      .+.++    .+++++||...    .+| +|+.|||+...+++|++++||+||||++|++|+|.||||+++|++  +|| |
T Consensus       399 ~~a~~----~G~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~~~~G~L  474 (551)
T TIGR02288       399 AEARA----LGEVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVVAVDDGAHAVELARRSVREKGAM  474 (551)
T ss_pred             HHHHh----CCCEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEEEEECCHHHHHHHHhcCCCCCCCc
Confidence            65544    44777777532    135 588999995444599999999999999999999999999999998  566 9


Q ss_pred             eEEEecCCHHHHHHHhhcc--ceeeEEECCCccccCCCCCCcccCCCCCCCCcc-hHHHHHHhhhccEEEEe
Q 038617          375 AIYAFTKDETFKKQIVSGT--SSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYH-GHYSFETFSHEKAIMQR  443 (484)
Q Consensus       375 ~a~v~t~d~~~~~~~~~~l--~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~-g~~~~~~f~~~k~v~~~  443 (484)
                      ++||||+|.+.++++.+++  ..|.++||....-+.+...||++...||..... ..+.--.|...|.-..+
T Consensus       475 ta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN~~~~~~~~~~sg~n~~a~~~~~~~~~~~~r~~~~~  546 (551)
T TIGR02288       475 TVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVNQSAAFSDFHGTGGNPAANASLSDGAFVANRFRVVQ  546 (551)
T ss_pred             eEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEccCCCCCCCCCCCCCCccCCcccchhhhhcceEEEE
Confidence            9999999999999999998  234444443322222334568888888887554 33445556655544333


No 117
>cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like. Phenylacetic acid degradation (PAD) proteins PaaZ  (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system.  This CD is limited to bacterial monofunctional enzymes.
Probab=100.00  E-value=2.9e-75  Score=610.46  Aligned_cols=426  Identities=16%  Similarity=0.203  Sum_probs=364.6

Q ss_pred             HHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhH----HHHHHHHHHHHHHHHHH
Q 038617            7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYR----DEIGLIKKSAKYALSCL   82 (484)
Q Consensus         7 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~----~ev~~~~~~~~~~~~~~   82 (484)
                      |+++++++|++|++.|+++++++|.++|.+++++|++++++|+++++.|+||+..++..    .|+..+++.++|+.+..
T Consensus        85 dv~~ai~aA~~A~~~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~Gk~~~~a~qa~~~~evd~a~e~~~~a~~~~  164 (549)
T cd07127          85 DPDALLAAARAAMPGWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTGQAFMMAFQAGGPHAQDRGLEAVAYAWREM  164 (549)
T ss_pred             HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHCCCHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence            89999999999999999999999999999999999999999999999999999987753    27999999999998887


Q ss_pred             HHhhcCccccCc-cc--cCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHH----HHH
Q 038617           83 DKWMAPKKRRLP-LL--FFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECAS----FLA  155 (484)
Q Consensus        83 ~~~~~~~~~~~~-~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~----~l~  155 (484)
                      .++.....-..+ ..  ........+++|+||+++|+|||||+++.+.++++||++||+||+|||+.+|+++.    .+.
T Consensus       165 ~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~~ALaaGN~VVvKPs~~a~ls~~~~~~~i~  244 (549)
T cd07127         165 SRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLFASLATGNPVIVKPHPAAILPLAITVQVAR  244 (549)
T ss_pred             HhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHHHHHhcCCeEEEECCcccchhHHHHHHHHH
Confidence            765321100000 00  00112245789999999999999999999999999999999999999999998764    456


Q ss_pred             HHhccc-cCccceeeccCC--hhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCC
Q 038617          156 ETIPLY-LDCKAIKVTNGG--VDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLD  231 (484)
Q Consensus       156 ~~l~~a-lp~g~v~~v~g~--~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daD  231 (484)
                      ++|.++ +|+|+||+++|+  .+.++.|++|+ ++.|.||||+.+|+.|.+.++  .+|+++|+|||||+||++   |+|
T Consensus       245 ~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~~a~--~~~v~~ElGGkn~~IV~~---dAD  319 (549)
T cd07127         245 EVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEANAR--QAQVYTEKAGVNTVVVDS---TDD  319 (549)
T ss_pred             HHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhc--cCcEEEecCCcCeEEECC---CCC
Confidence            888888 999999999983  57899999998 999999999999999999886  389999999999999999   999


Q ss_pred             HHHHHHHHHHhhcccCCCCccccCCceEEccc---------hHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHH
Q 038617          232 IKVTVKRIIGGKFASCNGQVCVGVDYILVEKK---------FAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFER  301 (484)
Q Consensus       232 l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~---------i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~  301 (484)
                      ++.+++.+++++|. |+||.|++++|+|||++         +||+|++.|+++++++ +||| +..+.+||++++.++++
T Consensus       320 l~~aa~~i~~~~f~-~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~~~l-~Gdp~~~~~~~Gpli~~~~~~r  397 (549)
T cd07127         320 LKAMLRNLAFSLSL-YSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAIDGL-LADPARAAALLGAIQSPDTLAR  397 (549)
T ss_pred             HHHHHHHHHHHHHc-cCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHHHHh-cCCccccccccCCcCCHHHHHH
Confidence            99999999999999 99999999999999999         8999999999999999 8888 78899999999999999


Q ss_pred             HHHHhhchhcCCceeeCCCcCC----CCC-eeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCC--C-C
Q 038617          302 LRKLLKDPLVADAIVHGGLLDK----ENL-FIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRP--K-P  373 (484)
Q Consensus       302 ~~~~i~~a~~~~~~~~gg~~~~----~g~-~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~--~-g  373 (484)
                      +.+.++    .+++++||....    .|+ |+.|||+..++++|++++||+||||++|++|+|.||||+++|++.  + |
T Consensus       398 i~~a~~----~g~vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~~eai~~an~~~~~~gg  473 (549)
T cd07127         398 IAEARQ----LGEVLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFVVATDSTDHSIELARESVREHGA  473 (549)
T ss_pred             HHHHHh----CCCEEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcCceEEEEEeCCHHHHHHHHHhcccCCCC
Confidence            987664    455888876421    344 569999998889999999999999999999999999999999974  4 6


Q ss_pred             ceEEEecCCHHHHHHHhhc-ccee-eEEECCCccccCCCCCCcccCCCCCCCCcc-hHHHHHHhhhccEEEEe
Q 038617          374 LAIYAFTKDETFKKQIVSG-TSSG-SLIFNDTLVQQLCDVLPFGGVGQSGIGRYH-GHYSFETFSHEKAIMQR  443 (484)
Q Consensus       374 l~a~v~t~d~~~~~~~~~~-l~~g-~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~-g~~~~~~f~~~k~v~~~  443 (484)
                      |++||||+|.+.++++.++ .++| .++||.....+.+..+||||...||..... ..+..-.|...|--..+
T Consensus       474 Lt~sVfs~D~~~~~~~~~~~~~~~~~~~iN~tg~v~~~q~~~Fg~~~~sg~n~~a~~~~~~~~fv~~r~~~~~  546 (549)
T cd07127         474 MTVGVYSTDPEVVERVQEAALDAGVALSINLTGGVFVNQSAAFSDFHGTGANPAANAALTDGAFVANRFRVVQ  546 (549)
T ss_pred             ceEEEEcCCHHHHHHHHHHHHHhcCcEEEcCCceEEEecCcCCCCCCCCCCCcccccccchhhhhhcceEEEE
Confidence            9999999999999999998 4555 999995543334445669999999998655 44556667766654443


No 118
>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating).
Probab=100.00  E-value=1.6e-74  Score=601.35  Aligned_cols=411  Identities=15%  Similarity=0.117  Sum_probs=353.4

Q ss_pred             CCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHH
Q 038617            3 AAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCL   82 (484)
Q Consensus         3 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~   82 (484)
                      .+.+|+++++++|++||+.|++++.++|.++|++++++|++++++|++++++|+||+..+++..+.......+.+++...
T Consensus         5 ~~~~~v~~av~~A~~A~~~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~~~~   84 (488)
T TIGR02518         5 YSIQQVRNLIRSAKVAQKKLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSIKDM   84 (488)
T ss_pred             cCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhhC
Confidence            57889999999999999999999999999999999999999999999999999999988875423333444444443322


Q ss_pred             HHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHh----
Q 038617           83 DKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI----  158 (484)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l----  158 (484)
                      +. .     .......+...+.+++|+|||++|+|||||+.++.+++++||++||+||+|||+.+|.++..+++++    
T Consensus        85 ~~-~-----G~~~~~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l  158 (488)
T TIGR02518        85 KT-I-----GILSEDKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAA  158 (488)
T ss_pred             cc-c-----ceecCCCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHH
Confidence            11 1     1111122345678899999999999999999999999999999999999999999999999865554    


Q ss_pred             ccc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617          159 PLY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVT  235 (484)
Q Consensus       159 ~~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~a  235 (484)
                      .++ +|+|+||++++ +.+.++.|++|+ ||+|+||||+.+++.    ++.+++|+++|+|||+|+||++   |||++.|
T Consensus       159 ~eaGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~~~----a~~~~~pv~~e~gGn~p~iV~~---dADld~A  231 (488)
T TIGR02518       159 EEAGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVKA----AYSSGTPAIGVGPGNGPAYIER---TANVKKA  231 (488)
T ss_pred             HHcCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHHHH----HHHcCCCEEEEcCCCCeEEEeC---CCCHHHH
Confidence            676 99999999998 678899999997 999999999996644    4556799999999999999999   9999999


Q ss_pred             HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHH-------HHhhcCCCC--CCCCccccccCHHHHHHHHHHh
Q 038617          236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTT-------IKKFYGENP--KDSKSISRIINEYHFERLRKLL  306 (484)
Q Consensus       236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~-------~~~~~~g~~--~~~~~~gpli~~~~~~~~~~~i  306 (484)
                      ++.+++++|+ |+||.|++.+|+|||+++||+|+++|+++       .+.+++|+|  ++++++||+++.++++++.+++
T Consensus       232 a~~iv~sk~~-~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i  310 (488)
T TIGR02518       232 VRDIIDSKTF-DNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLA  310 (488)
T ss_pred             HHHHHHHHhc-CCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHh
Confidence            9999999999 99999999999999999999999999998       888888885  5788999999999999999999


Q ss_pred             hchhc-CCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhc----CCCCceEEEecC
Q 038617          307 KDPLV-ADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINS----RPKPLAIYAFTK  381 (484)
Q Consensus       307 ~~a~~-~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~----~~~gl~a~v~t~  381 (484)
                      +++.. ++++++||..             .+++++++ .+|+||||++|++|+|+||||+++|+    ++|||+++|||+
T Consensus       311 ~~av~~gakll~gg~~-------------~v~~~~~~-~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~  376 (488)
T TIGR02518       311 GLTVPEDAKVLIGEQN-------------GVGNKNPY-SREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSE  376 (488)
T ss_pred             ccccCCCCEEEEeCCC-------------CCCCCCcc-ccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeC
Confidence            99874 7889988742             35677885 79999999999999999999999887    699999999999


Q ss_pred             CHHHHHHHhhccceeeEEECCCccc---------cCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617          382 DETFKKQIVSGTSSGSLIFNDTLVQ---------QLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS  444 (484)
Q Consensus       382 d~~~~~~~~~~l~~g~v~iN~~~~~---------~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~  444 (484)
                      |.+++++|++++++|+|+||++..+         .....+.||+++.+++.   .+-|++++++.|+|...-
T Consensus       377 d~~~a~~f~~~i~ag~V~VN~~~~~~~~Ga~t~~~~~~~~G~G~~~g~st~---~~v~~~~l~~~k~v~~~~  445 (488)
T TIGR02518       377 NKDIVREFALKKPVSRMLVNTGGSLGGIGATTNLVPAFTLGCGAVGGSSTS---DNITPENLINIRRVAYGV  445 (488)
T ss_pred             CHHHHHHHHHhCCeeEEEEcCCCcccccccccCCCccccccccccCCCcCC---CCCCHHHhheeeEEEecc
Confidence            9999999999999999999964321         12233448888877776   389999999999987653


No 119
>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional
Probab=100.00  E-value=2.6e-75  Score=598.97  Aligned_cols=387  Identities=20%  Similarity=0.217  Sum_probs=328.5

Q ss_pred             HHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCCh----hhhhH-------HHHHHHHH
Q 038617            5 MGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHP----VETYR-------DEIGLIKK   73 (484)
Q Consensus         5 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~ea~~-------~ev~~~~~   73 (484)
                      .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++++++|+||+.    .++..       .|+..+++
T Consensus         3 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~   82 (417)
T PRK00197          3 MEYLEELGRRAKAASRKLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAE   82 (417)
T ss_pred             hhHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHH
Confidence            47899999999999999999999999999999999999999999999998887764    34432       36666666


Q ss_pred             HHHHHHHHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHH
Q 038617           74 SAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASF  153 (484)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~  153 (484)
                      .+++++...+.. + ..........+...+++++|+|||++|+||| | .++++++++||++||+||+|||+.+|.|+.+
T Consensus        83 ~~~~~a~~~~~~-g-~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~  158 (417)
T PRK00197         83 GLRQVAALPDPV-G-EVLDGWTLPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNRA  158 (417)
T ss_pred             HHHHHhhcCCCc-c-ccccceecCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHHH
Confidence            666665443221 1 1100000011235688999999999999986 4 7788999999999999999999999999999


Q ss_pred             HHHHh----ccc-cCccceeeccC-Chh-HHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcC
Q 038617          154 LAETI----PLY-LDCKAIKVTNG-GVD-VCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDT  225 (484)
Q Consensus       154 l~~~l----~~a-lp~g~v~~v~g-~~~-~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~  225 (484)
                      +++++    .++ +|+|++|+++| +.+ .+..|..|+ +|+|+||||+.+|+.|++.+   +||+++|+|||||+||++
T Consensus       159 l~~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a---~~~~~lELGGk~p~IV~~  235 (417)
T PRK00197        159 LVAVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA---TVPVIEHGDGICHIYVDE  235 (417)
T ss_pred             HHHHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc---CCCEEeecCCcceEEEeC
Confidence            99886    466 99999999996 544 566677787 99999999999999998865   599999999999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHH
Q 038617          226 LSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKL  305 (484)
Q Consensus       226 ~~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~  305 (484)
                         |||++.|++.+++++|. |+| .|++++|+|||+++||+|+++|+++++++.++                       
T Consensus       236 ---dAdl~~Aa~~iv~~~~~-n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~-----------------------  287 (417)
T PRK00197        236 ---SADLDKALKIVLNAKTQ-RPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGVE-----------------------  287 (417)
T ss_pred             ---CCCHHHHHHHHHHhccC-CCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCCe-----------------------
Confidence               99999999999999999 999 99999999999999999999999999876431                       


Q ss_pred             hhchhcCCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 038617          306 LKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETF  385 (484)
Q Consensus       306 i~~a~~~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~  385 (484)
                               ++ ||... .+ |+ |||+   +++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++
T Consensus       288 ---------~~-~~~~~-~~-~~-PTi~---~~~~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~~~  351 (417)
T PRK00197        288 ---------LR-GDEAA-LA-LL-PDVV---PATEEDWDTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTEDYAA  351 (417)
T ss_pred             ---------Ee-cCHHH-HH-hh-cccc---cCCcchhhhhhhCceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCCHHH
Confidence                     11 11100 12 23 9998   4689999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhccceeeEEECCCccccCCCCCCcccCCCCCCC----CcchHHHHHHhhhccEEEEec
Q 038617          386 KKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIG----RYHGHYSFETFSHEKAIMQRS  444 (484)
Q Consensus       386 ~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G----~~~g~~~~~~f~~~k~v~~~~  444 (484)
                      ++++++++++|+|+||+++.+  .+..||||.+.||+|    +++|.+|+++|++.|++++..
T Consensus       352 ~~~~~~~l~~G~v~VN~~~~~--~~~~p~G~~~~sG~g~~~~~~~g~~~l~~~~~~k~v~~~~  412 (417)
T PRK00197        352 AERFLNEVDSAAVYVNASTRF--TDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVLGD  412 (417)
T ss_pred             HHHHHHhCCeeEEEEeCCCcc--CCCCccccchhheeecCCCcCCCccchHhhcEEEEEEECC
Confidence            999999999999999987653  456899999999999    999999999999999998753


No 120
>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19. Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl  5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).
Probab=100.00  E-value=3.3e-75  Score=596.21  Aligned_cols=381  Identities=20%  Similarity=0.231  Sum_probs=323.0

Q ss_pred             HHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChh----hhhH-------HHHHHHHHHHHHH
Q 038617           10 DKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPV----ETYR-------DEIGLIKKSAKYA   78 (484)
Q Consensus        10 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----ea~~-------~ev~~~~~~~~~~   78 (484)
                      ..+++|++||+.|+++|.++|.++|+++++.|++++++|+++++.|+||+..    ++..       .|+..+++.++++
T Consensus         2 ~~~~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~~   81 (406)
T cd07079           2 ELAKRAKAASRALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQV   81 (406)
T ss_pred             hHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHHH
Confidence            5788999999999999999999999999999999999999999777766643    3332       2666666666665


Q ss_pred             HHHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHh
Q 038617           79 LSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI  158 (484)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l  158 (484)
                      +...+ ..+ ..........+...+++++|+|||++|+|| +| .++++++++||++||+||+|||+.+|.++..+++++
T Consensus        82 a~~~~-~~g-~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~  157 (406)
T cd07079          82 AALPD-PVG-EVLRGWTLPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEII  157 (406)
T ss_pred             HhcCC-CCc-ccccceeccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHH
Confidence            54322 111 100000001123567899999999999996 56 778899999999999999999999999999999998


Q ss_pred             c----cc-cCccceeeccC-Ch-hHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCC
Q 038617          159 P----LY-LDCKAIKVTNG-GV-DVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPL  230 (484)
Q Consensus       159 ~----~a-lp~g~v~~v~g-~~-~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~da  230 (484)
                      .    ++ +|+|++|+++| +. +.++.|..|+ +|+|+||||+.+|+.|++.+   ++|+++|||||||+||++   ||
T Consensus       158 ~~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a---~~pv~lELGGk~p~IV~~---dA  231 (406)
T cd07079         158 QEALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA---TIPVIKHGDGNCHVYVDE---SA  231 (406)
T ss_pred             HHHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc---CCCEEeecCCcceEEEeC---CC
Confidence            7    56 99999999998 45 4577777887 99999999999999998876   699999999999999999   99


Q ss_pred             CHHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchh
Q 038617          231 DIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPL  310 (484)
Q Consensus       231 Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~  310 (484)
                      |++.|++.+++++|. |+| .|++++|||||+++||+|+++|++++.+.                               
T Consensus       232 Dl~~Aa~~i~~~~f~-n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~~-------------------------------  278 (406)
T cd07079         232 DLEMAVRIVVNAKTQ-RPS-VCNALETLLVHRDIAEEFLPKLAEALREA-------------------------------  278 (406)
T ss_pred             CHHHHHHHHHHcccC-CCc-ccccceeEEEeHHHHHHHHHHHHHHHHHC-------------------------------
Confidence            999999999999999 999 99999999999999999999999887642                               


Q ss_pred             cCCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHh
Q 038617          311 VADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIV  390 (484)
Q Consensus       311 ~~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~  390 (484)
                       +++++ ||...  ..|++||    ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+++++
T Consensus       279 -ga~~~-~g~~~--~~~~~pt----v~~d~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~~~~  350 (406)
T cd07079         279 -GVELR-GDEET--LAILPGA----KPATEEDWGTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTENYETAERFL  350 (406)
T ss_pred             -CCEEe-cCHHH--HHhcccc----cCCCcchhhhhhhCceeEEEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHHHHH
Confidence             33433 33221  1377888    7889999999999999999999999999999999999999999999999999999


Q ss_pred             hccceeeEEECCCccccCCCCCCcccCCCCCC----CCcchHHHHHHhhhccEEEEe
Q 038617          391 SGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGI----GRYHGHYSFETFSHEKAIMQR  443 (484)
Q Consensus       391 ~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~----G~~~g~~~~~~f~~~k~v~~~  443 (484)
                      +++++|+|+||+++..  .+.+||||.+.||.    |+++|.+++++|++.|++++.
T Consensus       351 ~~~~~G~v~iN~~~~~--~~~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~k~i~~~  405 (406)
T cd07079         351 REVDSAAVYVNASTRF--TDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVRG  405 (406)
T ss_pred             HhCCeeEEEEeCCCcc--cCCCccccceeeeeecCCCcCCCCcChHHhcEEEEEEeC
Confidence            9999999999987653  45689999999988    899999999999999998764


No 121
>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.
Probab=100.00  E-value=1.6e-74  Score=592.09  Aligned_cols=369  Identities=17%  Similarity=0.165  Sum_probs=319.8

Q ss_pred             HHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHH-HHHHHHHHHHHhh
Q 038617            8 IEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKK-SAKYALSCLDKWM   86 (484)
Q Consensus         8 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~-~~~~~~~~~~~~~   86 (484)
                      +++|+++|++||+.|+++|.++|.++|++++++|++++++|++++++|+|||+.+++..|+...++ .++++...  ...
T Consensus         1 ~~~av~~A~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~~~   78 (436)
T cd07122           1 VDELVERARKAQREFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--KTV   78 (436)
T ss_pred             ChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--cce
Confidence            478999999999999999999999999999999999999999999999999999887546666655 45555431  111


Q ss_pred             cCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc----cc-
Q 038617           87 APKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP----LY-  161 (484)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~----~a-  161 (484)
                      . .   . ....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.    ++ 
T Consensus        79 g-~---~-~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG  153 (436)
T cd07122          79 G-V---I-EEDEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAG  153 (436)
T ss_pred             e-e---e-ccCCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcC
Confidence            0 0   1 11123356789999999999999999999999999999999999999999999999999888875    56 


Q ss_pred             cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617          162 LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI  239 (484)
Q Consensus       162 lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i  239 (484)
                      +|+|++|+++| +.+.++.|++|+ ||+|+||||+++++    .++++++|+++|+|||||+||++   |||++.|++.+
T Consensus       154 ~P~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~~----~a~~~~~~~~~elgG~~p~iV~~---dADl~~A~~~i  226 (436)
T cd07122         154 APEGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVK----AAYSSGKPAIGVGPGNVPAYIDE---TADIKRAVKDI  226 (436)
T ss_pred             CCchhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHHH----HHHhcCCCEEEecCCCCeEEEcC---CCCHHHHHHHH
Confidence            99999999998 667899999998 99999999999764    45677899999999999999999   99999999999


Q ss_pred             HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhh-------cCCCC--CCCCccccccCHHHHHHHHHHhhchh
Q 038617          240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKF-------YGENP--KDSKSISRIINEYHFERLRKLLKDPL  310 (484)
Q Consensus       240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~-------~~g~~--~~~~~~gpli~~~~~~~~~~~i~~a~  310 (484)
                      ++++|. |+||.|++++|+|||+++||+|+++|+++...+       +++++  +.++.+||+++..+.+++.+++..+.
T Consensus       227 ~~~~f~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~  305 (436)
T cd07122         227 ILSKTF-DNGTICASEQSVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEV  305 (436)
T ss_pred             HHHhhc-cCCCCCCCCCEEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCC
Confidence            999999 999999999999999999999999999988765       66665  45677899998888888877766543


Q ss_pred             c-CCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcC----CCCceEEEecCCHHH
Q 038617          311 V-ADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSR----PKPLAIYAFTKDETF  385 (484)
Q Consensus       311 ~-~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~----~~gl~a~v~t~d~~~  385 (484)
                      . +++++.|+             +++++++|+++ +|.||||++|++|+|+||||+++|++    +|||++||||+|.++
T Consensus       306 ~~ga~vl~~~-------------~~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~  371 (436)
T cd07122         306 PEDTKVLVAE-------------ETGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEV  371 (436)
T ss_pred             CCCCeEEEEe-------------cCCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHH
Confidence            3 33444333             56888999987 56799999999999999999999997    899999999999999


Q ss_pred             HHHHhhccceeeEEECCCcc
Q 038617          386 KKQIVSGTSSGSLIFNDTLV  405 (484)
Q Consensus       386 ~~~~~~~l~~g~v~iN~~~~  405 (484)
                      ++++++++++|+|+||+++.
T Consensus       372 a~~~~~~l~aG~V~IN~~~~  391 (436)
T cd07122         372 IEEFALRMPVSRILVNTPSS  391 (436)
T ss_pred             HHHHHhhCCceEEEEeCCcc
Confidence            99999999999999998764


No 122
>PLN02418 delta-1-pyrroline-5-carboxylate synthase
Probab=100.00  E-value=1.4e-73  Score=616.32  Aligned_cols=385  Identities=20%  Similarity=0.210  Sum_probs=334.8

Q ss_pred             HHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHH------HHHcC--CChhhhh---HHHHHHHHHH
Q 038617            6 GEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKAL------HQDLG--KHPVETY---RDEIGLIKKS   74 (484)
Q Consensus         6 ~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~------~~e~G--k~~~ea~---~~ev~~~~~~   74 (484)
                      +.+++++++|++||+.|+++|.++|.++|++++++|+++.++|++++      ++|+|  ||+.++.   ..|+..+++.
T Consensus       294 ~~~~~~~~aA~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~~  373 (718)
T PLN02418        294 VGAREMAVAARESSRKLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAAS  373 (718)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHHH
Confidence            35999999999999999999999999999999999999999999996      77999  8877764   3599999999


Q ss_pred             HHHHHHHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHH
Q 038617           75 AKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFL  154 (484)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l  154 (484)
                      +++++.. ....+.. ........+...++.++|+|||++|+||| |+.+. ++++|||++||+||+|||+.+|.++..|
T Consensus       374 ~~~~a~~-~~~~g~~-~~~~~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~l  449 (718)
T PLN02418        374 IRQLADM-EDPIGRV-LKRTEVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAIL  449 (718)
T ss_pred             HHHHhcC-ccccCcc-ccccccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHHH
Confidence            9999876 3332211 11000112234678999999999999999 99999 8999999999999999999999999999


Q ss_pred             HHHhccccCccc----eeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCC
Q 038617          155 AETIPLYLDCKA----IKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSP  229 (484)
Q Consensus       155 ~~~l~~alp~g~----v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~d  229 (484)
                      ++++.+++|+|+    +|+++|+.+.++.|..|+ ||+|+||||+..   +.+.++.++||+++|+|||||+||++   |
T Consensus       450 ~~l~~eAlP~gv~~~v~nvv~g~~~~g~~L~~~~~v~~V~FTGSt~~---i~~~aa~~~k~v~lELGGk~p~iV~~---D  523 (718)
T PLN02418        450 HKVITDAIPKTVGGKLIGLVTSRDEIPDLLKLDDVIDLVIPRGSNKL---VSQIKASTKIPVLGHADGICHVYVDK---S  523 (718)
T ss_pred             HHHHHHHccccCCcceEEEeCCcHHHHHHHhhCCCCCEEEEeCCHHH---HHHHHHhcCCCEEEeCCCcceEEEeC---C
Confidence            999999999996    999998667888999997 999999999964   44456667899999999999999999   9


Q ss_pred             CCHHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhch
Q 038617          230 LDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDP  309 (484)
Q Consensus       230 aDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a  309 (484)
                      ||++.|++.+++++|. | ||.|++.+|+|||+++||+                       |         .+.++|+++
T Consensus       524 ADld~A~~~i~~~~~~-n-GQ~C~a~~RllVh~~i~d~-----------------------G---------~~~~~i~~a  569 (718)
T PLN02418        524 ADMDMAKRIVVDAKTD-Y-PAACNAMETLLVHKDLVQN-----------------------G---------GLNDLLVAL  569 (718)
T ss_pred             CCHHHHHHHHHHHhCC-C-CCccccCcEEEEecccccc-----------------------c---------cHHHHHHHH
Confidence            9999999999999999 8 9999999999999999987                       1         246778887


Q ss_pred             hc-CCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHH
Q 038617          310 LV-ADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQ  388 (484)
Q Consensus       310 ~~-~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~  388 (484)
                      .+ |+++ +||.... |      ++. + ++|++++||+||||++|.+|+|+||||+++|+++|||+++|||+|.+++.+
T Consensus       570 ~~~Ga~l-~Gg~~~~-g------~l~-~-~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a~~  639 (718)
T PLN02418        570 RSAGVTL-YGGPRAS-K------LLN-I-PEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVAEI  639 (718)
T ss_pred             HHCCCEE-ECCcccc-C------eeC-C-CCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHHHHH
Confidence            64 6677 7875432 3      233 3 789999999999999999999999999999999999999999999999999


Q ss_pred             HhhccceeeEEECCCccccCCCCCCcccCCCCCC--CCcc--hHHHHHHhhhccEEEEecCc
Q 038617          389 IVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGI--GRYH--GHYSFETFSHEKAIMQRSFF  446 (484)
Q Consensus       389 ~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~--G~~~--g~~~~~~f~~~k~v~~~~~~  446 (484)
                      +++++++|.|+||+++..  .+..||||+|.||+  |+++  |++|+++|++.|++++....
T Consensus       640 ~a~~l~aG~V~IN~~~~~--~~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~K~v~~g~g~  699 (718)
T PLN02418        640 FLRQVDSAAVFHNASTRF--SDGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILRGNGQ  699 (718)
T ss_pred             HHHhCCeeEEEEeCCCCC--CCCCCCCCcccccccCCcCCCCCHHHHHHHhcEEEEEECCCe
Confidence            999999999999987643  45679999999999  9875  99999999999999988754


No 123
>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional
Probab=100.00  E-value=2e-73  Score=632.37  Aligned_cols=411  Identities=16%  Similarity=0.150  Sum_probs=355.3

Q ss_pred             CCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHH
Q 038617            3 AAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCL   82 (484)
Q Consensus         3 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~   82 (484)
                      ++.+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++++++|+|||..+++..+...+..       ..
T Consensus         9 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~-------~~   81 (862)
T PRK13805          9 TNVAELDALVEKAKKAQEEFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASE-------YI   81 (862)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHH-------HH
Confidence            67899999999999999999999999999999999999999999999999999999998876423322222       22


Q ss_pred             HHhhcCccc-cCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhcc-
Q 038617           83 DKWMAPKKR-RLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPL-  160 (484)
Q Consensus        83 ~~~~~~~~~-~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~-  160 (484)
                      ..+...+.. ...........+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.+ 
T Consensus        82 ~~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~~  161 (862)
T PRK13805         82 YNSYKDEKTVGVIEEDDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLDA  161 (862)
T ss_pred             HHHhcCCCcccccCcCCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHHH
Confidence            222211111 111111233567889999999999999999999999999999999999999999999999999999864 


Q ss_pred             ---c-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHH
Q 038617          161 ---Y-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKV  234 (484)
Q Consensus       161 ---a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~  234 (484)
                         + +|+|+||+++| +.+.++.|++|+ ||+|+||||+.++    +.++++++|+++|+|||||+||++   |||++.
T Consensus       162 l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~----~~a~~~~~pv~~e~gGk~p~iV~~---dADl~~  234 (862)
T PRK13805        162 AVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMV----KAAYSSGKPALGVGAGNVPAYIDK---TADIKR  234 (862)
T ss_pred             HHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHH----HHHHhcCCCeEEECCCCCeEEEeC---CCCHHH
Confidence               4 99999999998 778899999998 9999999999865    455678999999999999999999   999999


Q ss_pred             HHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCC-
Q 038617          235 TVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVAD-  313 (484)
Q Consensus       235 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~-  313 (484)
                      |++.|++++|+ |+||.|+++++||||+++||+|+++|+++.              +|++++.+++++.++++++.+++ 
T Consensus       235 Aa~~i~~~k~~-n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~g--------------~~l~~~~~~~~v~~~i~~a~~~~~  299 (862)
T PRK13805        235 AVNDILLSKTF-DNGMICASEQAVIVDDEIYDEVKEEFASHG--------------AYFLNKKELKKLEKFIFGKENGAL  299 (862)
T ss_pred             HHHHHHHhhhc-cCCCccCCCceEEEehhhHHHHHHHHHHhC--------------CeeCCHHHHHHHHHHHhhccCCCc
Confidence            99999999999 999999999999999999999999988762              58999999999999999875432 


Q ss_pred             c-eeeCCCcC----CCCCeeeeEE------EeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhc----CCCCceEEE
Q 038617          314 A-IVHGGLLD----KENLFIEPTI------LLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINS----RPKPLAIYA  378 (484)
Q Consensus       314 ~-~~~gg~~~----~~g~~~~Pti------l~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~----~~~gl~a~v  378 (484)
                      . .+.||...    ..|+++.||+      +.+++++|++++ |+||||++|++|+|+||||+++|+    ++|||+++|
T Consensus       300 ~~~~~g~~~~~~~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i  378 (862)
T PRK13805        300 NADIVGQSAYKIAEMAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVI  378 (862)
T ss_pred             CccccCCCHHHHHHHcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEE
Confidence            1 24465321    2478889987      678999999876 799999999999999999999988    589999999


Q ss_pred             ecCCHHHHHHHhhccceeeEEECCCccc--------cCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617          379 FTKDETFKKQIVSGTSSGSLIFNDTLVQ--------QLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS  444 (484)
Q Consensus       379 ~t~d~~~~~~~~~~l~~g~v~iN~~~~~--------~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~  444 (484)
                      ||+|.+.+++|++++++|+|+||.++.+        ...+.+|||| |.||+|.++|+.|+++|++.|+|..+.
T Consensus       379 ~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~-G~~g~~~~~g~~g~~~~~~~k~v~~~~  451 (862)
T PRK13805        379 YTNDDELIKEFGLRMKACRILVNTPSSQGGIGDLYNKLAPSLTLGC-GSWGGNSVSENVGAKHLLNIKTVAKRR  451 (862)
T ss_pred             ECCCHHHHHHHHhhCCccEEEEeCCccccccccccCCcCccccccc-cCCCCCcCCCCCCHHHhheeeeeeecc
Confidence            9999999999999999999999987522        3578899998 999999999999999999999998764


No 124
>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]
Probab=100.00  E-value=1.6e-70  Score=540.48  Aligned_cols=416  Identities=22%  Similarity=0.345  Sum_probs=379.4

Q ss_pred             CCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHH
Q 038617            3 AAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCL   82 (484)
Q Consensus         3 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~   82 (484)
                      ++.+|+++|++.|..|+..|..+|+++|+.+|++++++++.+..+|..++++|.||+...+. .|+..+++.++||+...
T Consensus       147 a~~~~v~~A~~~A~~a~p~W~atp~~eRAaiL~raAdlme~~m~~L~~L~~REAGKtl~naI-AEVREAVDFlrYYA~~a  225 (769)
T COG4230         147 ATEADVEQALEAAVAAAPIWSATPPAERAAILERAADLMEAQMPQLMGLLVREAGKTLSNAI-AEVREAVDFLRYYAGQA  225 (769)
T ss_pred             cCHHHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHH-HHHHHHHHHHHHHHHHH
Confidence            67899999999999999999999999999999999999999999999999999999999996 59999999999999887


Q ss_pred             HHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc-
Q 038617           83 DKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY-  161 (484)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a-  161 (484)
                      +.-++.               ....|+|.+.+|+|||||+.+....++.||++||+|+-||.+++|+.+..-+++++++ 
T Consensus       226 r~~~g~---------------~~~~~~G~vVcISPWNFPLAIFtGqiaAAL~aGN~VlAKPAEqTpLIAa~aV~ll~eAG  290 (769)
T COG4230         226 RDTFGN---------------LTHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEAG  290 (769)
T ss_pred             hcccCc---------------cccCCCCcEEEECCCCchHHHHHhHHHHHHHcCCccccCccccccHHHHHHHHHHHHcC
Confidence            642211               2467999999999999999999999999999999999999999999999999999999 


Q ss_pred             cCccceeeccCC-hhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhc-c--cCceeeecCCcCceEEcCCCCCCCHHHHH
Q 038617          162 LDCKAIKVTNGG-VDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAK-H--LTPVTLELGGKCPAILDTLSSPLDIKVTV  236 (484)
Q Consensus       162 lp~g~v~~v~g~-~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~-~--~~~~~lelgG~~p~iV~~~~~daDl~~aa  236 (484)
                      +|++++|+++|+ ..++..|+.++ ++.|+||||+++++.|.+..++ +  ..|++.|.||-|.+|||.   +|--|.++
T Consensus       291 vP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li~~~LA~r~g~~~pLIAETGGqNAMIVDS---sAL~EQVv  367 (769)
T COG4230         291 VPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGGQNAMIVDS---SALAEQVV  367 (769)
T ss_pred             CChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHHHHHHhhcCCCCCceEeccCCcceEEeec---hhhHHHHH
Confidence            999999999995 46899999986 9999999999999999988776 3  478999999999999999   99999999


Q ss_pred             HHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhcCCce
Q 038617          237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLVADAI  315 (484)
Q Consensus       237 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~  315 (484)
                      .+++.|+|. .+||+|++.+.+++++++.|..+++|+-++.++++|+| .-.+|+||+|+.++...++++|+.....++.
T Consensus       368 ~Dvl~SAFd-SAGQRCSALRvLclQ~DvAd~~l~mLKGAm~el~~G~p~~l~tDVGPVIdaEAk~~i~~Hi~~mr~~gr~  446 (769)
T COG4230         368 ADVLASAFD-SAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRL  446 (769)
T ss_pred             HHHHHHHhh-cccchhhhhhhhhhhhhHHHHHHHHHHHHHHHhccCCccceeccccccccHHHHHHHHHHHHHHHhcccc
Confidence            999999999 99999999999999999999999999999999999999 6789999999999999999999877655655


Q ss_pred             eeCCCcC---CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeC--CHHHHHHHHhcCCCCceEEEecCCHHHHHHHh
Q 038617          316 VHGGLLD---KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLN--NIQESIEFINSRPKPLAIYAFTKDETFKKQIV  390 (484)
Q Consensus       316 ~~gg~~~---~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~--~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~  390 (484)
                      ++--..+   .+|.|+.||++.-.+-+  -++.|+||||+.|++|+  ++++.|+-+|.++||||.+|||+-.+.+.++.
T Consensus       447 v~q~~~~~~~q~GtFv~Ptl~El~~~~--eL~rEVFGPVLHVvRy~~~~l~~vi~~INatGyGLT~GvHtRideti~~v~  524 (769)
T COG4230         447 VHQAAAPNSLQKGTFVAPTLIELENLD--ELQREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETIAHVT  524 (769)
T ss_pred             hhhccCCCccCCceeeCceeEEcCCHH--HHHHHhccceeEEEEecHHHHHHHHHHHhccCcceeeeeecchHHHHHHHH
Confidence            4332222   36999999999743333  36899999999999996  78999999999999999999999999999999


Q ss_pred             hccceeeEEECCCccccCCCCCCcccCCCCCCCCc-chHHHHHHhhhccEE
Q 038617          391 SGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRY-HGHYSFETFSHEKAI  440 (484)
Q Consensus       391 ~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~-~g~~~~~~f~~~k~v  440 (484)
                      +++++|++|||....++....+||||.|.||+|.. +|+.-+..|...+..
T Consensus       525 ~~~~aGNlYVNRN~vGAVVGVQPFGG~GLSGTGPKAGGp~YL~Rl~~~~p~  575 (769)
T COG4230         525 ERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTGPKAGGPLYLLRLVSERPW  575 (769)
T ss_pred             hhccccceEeeccceeeEEeeccCCCCCCCCCCCCCCChHHHHHHHhcCCc
Confidence            99999999999998888888999999999999965 689999999877664


No 125
>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family. The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of  endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an  important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase.  All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.
Probab=100.00  E-value=8.1e-70  Score=556.93  Aligned_cols=373  Identities=15%  Similarity=0.107  Sum_probs=326.4

Q ss_pred             HHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhh----------HHHHHHHHHHHHHHHHHH
Q 038617           13 AELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETY----------RDEIGLIKKSAKYALSCL   82 (484)
Q Consensus        13 ~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~----------~~ev~~~~~~~~~~~~~~   82 (484)
                      ++|++||+.|+++|.++|.++|++++++|++++++|+++++.|+||++.+..          ..|+..+++.+++++...
T Consensus         1 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~~   80 (397)
T cd07077           1 ESAKNAQRTLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITASV   80 (397)
T ss_pred             ChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHhc
Confidence            3689999999999999999999999999999999999999999999865432          126777777777666543


Q ss_pred             HHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc-
Q 038617           83 DKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY-  161 (484)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a-  161 (484)
                      .+.....     .. .....+++++|+|||++|+|||||+. +++++++||++||+||+|||+.+|.++..+++++.++ 
T Consensus        81 ~~~~~~~-----~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~  153 (397)
T cd07077          81 GHIQDVL-----LP-DNGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAAD  153 (397)
T ss_pred             CcccceE-----ec-CCCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHh
Confidence            2221110     01 12356889999999999999999999 9999999999999999999999999999999998763 


Q ss_pred             ---cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHH
Q 038617          162 ---LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTV  236 (484)
Q Consensus       162 ---lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa  236 (484)
                         +|++++++++| +.+.++.|++|+ +|.|+||||+.+++.+.+.+.  ++|+++|+||++|+||++   |||++.|+
T Consensus       154 ~~g~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~--~~~~~~~~gg~~~~iv~~---dad~~~a~  228 (397)
T cd07077         154 AAHGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSP--HIPVIGFGAGNSPVVVDE---TADEERAS  228 (397)
T ss_pred             hcCCCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCC--CCceEEecCCcceEEEcC---CCCHHHHH
Confidence               89999999997 667889999998 999999999999999988773  699999999999999999   99999999


Q ss_pred             HHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCcee
Q 038617          237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIV  316 (484)
Q Consensus       237 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~  316 (484)
                      +.+++++|. | ||.|+++++||||+++||+|+++|.+++..                                .|+++.
T Consensus       229 ~~~~~~~~~-~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~--------------------------------~G~~~~  274 (397)
T cd07077         229 GSVHDSKFF-D-QNACASEQNLYVVDDVLDPLYEEFKLKLVV--------------------------------EGLKVP  274 (397)
T ss_pred             HHHHHhhcc-C-CccCCCCeEEEEehhhhHHHHHHHHHHHHh--------------------------------cCcCcC
Confidence            999999999 9 999999999999999999999999988863                                245566


Q ss_pred             eCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHH----HHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617          317 HGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQ----ESIEFINSRPKPLAIYAFTKDETFKKQIVSG  392 (484)
Q Consensus       317 ~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~----eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~  392 (484)
                      .||.    +.|+.||      ++|++.+||+||||++|++|+|+|    +|++++|+++|||+++|||+|.+++++++++
T Consensus       275 ~g~~----~~~~~pt------~~~~~~~~E~FgPvl~v~~~~~~~eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~  344 (397)
T cd07077         275 QETK----PLSKETT------PSFDDEALESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDDFVQY  344 (397)
T ss_pred             CCce----eeEEecc------CCCChhhhhhhCceeEEEEEcchHHHHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHh
Confidence            5552    4677776      788999999999999999999996    6677889999999999999999999999999


Q ss_pred             cceeeEEECCCccccCCCCCCcccCC--CCCCCCcch-HHHHHHhhhccEEE
Q 038617          393 TSSGSLIFNDTLVQQLCDVLPFGGVG--QSGIGRYHG-HYSFETFSHEKAIM  441 (484)
Q Consensus       393 l~~g~v~iN~~~~~~~~~~~pfGG~~--~SG~G~~~g-~~~~~~f~~~k~v~  441 (484)
                      +++|+|+||++..+.....+||||++  .||+|+++| .+++++|++.|++.
T Consensus       345 l~~G~v~vN~~~~~~~~~~~~~gg~~~~~SG~g~~~g~~~~~~~~~~~k~v~  396 (397)
T cd07077         345 IDTASFYPNESSKKGRGAFAGKGVERIVTSGMNNIFGAGVGHDALRPLKRLV  396 (397)
T ss_pred             CCEEEEEEeCCccCCCccccCCCcceEEEccccCCCCCCCChHHhcceeEee
Confidence            99999999998765444778999999  899999999 99999999999875


No 126
>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily. The aldehyde dehydrogenase superfamily (ALDH-SF) of  NAD(P)+-dependent enzymes, in general, oxidize a wide range of  endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an  important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri
Probab=100.00  E-value=2.7e-68  Score=542.14  Aligned_cols=362  Identities=36%  Similarity=0.528  Sum_probs=337.4

Q ss_pred             HHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHhhcCccccC
Q 038617           14 ELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCLDKWMAPKKRRL   93 (484)
Q Consensus        14 ~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~   93 (484)
                      +|++|+.+|++++.++|.++|+++++.|.++.++|+++++.|+||+..++. .|+..+++.++++++..+++.+..   .
T Consensus         2 ~a~~a~~~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~~-~ev~~~~~~l~~~~~~~~~~~~~~---~   77 (367)
T cd06534           2 AARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEAL-GEVARAIDTFRYAAGLADKLGGPE---L   77 (367)
T ss_pred             hHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCc---c
Confidence            588999999999999999999999999999999999999999999999887 499999999999998887765422   1


Q ss_pred             ccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc-cCccceeeccC
Q 038617           94 PLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY-LDCKAIKVTNG  172 (484)
Q Consensus        94 ~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a-lp~g~v~~v~g  172 (484)
                      .....+....++++|+|||++|.|||+|+...++.+++||++||+||+|||+.+|.++..|.+++.++ +|++++++++|
T Consensus        78 ~~~~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~~~~  157 (367)
T cd06534          78 PSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPG  157 (367)
T ss_pred             cccCCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEEEEc
Confidence            12233456788999999999999999999999999999999999999999999999999999999999 89999999999


Q ss_pred             Ch-hHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHhhcccCCCC
Q 038617          173 GV-DVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQ  250 (484)
Q Consensus       173 ~~-~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~~~~~~~Gq  250 (484)
                      +. +.++.|+.|+ +|.|+||||+++++.|.+.++++++|+++|+||+|++||++   |+|++.|++.+++++|. ++||
T Consensus       158 ~~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~~~~~~~~e~~g~~~~iV~~---~ad~~~aa~~i~~~~~~-~~gq  233 (367)
T cd06534         158 GGDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDE---DADLDAAVEGAVFGAFF-NAGQ  233 (367)
T ss_pred             CchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCeEEECC---CCCHHHHHHHHHHHHHh-cCCC
Confidence            54 5888999997 99999999999999999999999999999999999999999   99999999999999999 9999


Q ss_pred             ccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCCCcCCCCCeeee
Q 038617          251 VCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLDKENLFIEP  330 (484)
Q Consensus       251 ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~P  330 (484)
                      .|+++++||||++++|+|+++|+                                                         
T Consensus       234 ~C~s~~~v~v~~~~~~~f~~~l~---------------------------------------------------------  256 (367)
T cd06534         234 ICTAASRLLVHESIYDEFVEKLV---------------------------------------------------------  256 (367)
T ss_pred             CCCCCcEEEEcHHHHHHHHHhhc---------------------------------------------------------
Confidence            99999999999999999998886                                                         


Q ss_pred             EEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEEECCCccccCCC
Q 038617          331 TILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCD  410 (484)
Q Consensus       331 til~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~  410 (484)
                      ||+.+++++++++++|+||||++|++|++++||++++|++++||++||||+|.+.++++++++++|+|+||+.+.+. .+
T Consensus       257 tl~~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~-~~  335 (367)
T cd06534         257 TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGV-GP  335 (367)
T ss_pred             eeeeCCCCCCccccCCccCceEEEEecCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCCCCCC-CC
Confidence            67777888999999999999999999999999999999999999999999999999999999999999999988653 78


Q ss_pred             CCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617          411 VLPFGGVGQSGIGRYHGHYSFETFSHEKAIM  441 (484)
Q Consensus       411 ~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~  441 (484)
                      .+||||.+.||+|+++|++++++|++.|++.
T Consensus       336 ~~pfgg~~~sG~g~~~g~~~~~~~~~~k~i~  366 (367)
T cd06534         336 EAPFGGVKNSGIGREGGPYGLEEYTRTKTVV  366 (367)
T ss_pred             CCCCCCcccCccCCCChHHHHHHhceEEEEe
Confidence            8999999999999999999999999999874


No 127
>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase. This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.
Probab=100.00  E-value=1.9e-68  Score=577.85  Aligned_cols=384  Identities=18%  Similarity=0.200  Sum_probs=316.7

Q ss_pred             HHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhh--------HHHHHHHHHHHHHH
Q 038617            7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETY--------RDEIGLIKKSAKYA   78 (484)
Q Consensus         7 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~--------~~ev~~~~~~~~~~   78 (484)
                      +++..+++|++||++|+.+|.++|.++|++++++|++++++|++    |+||++.+++        ..|+.....+++++
T Consensus       287 ~~~~~~~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~eei~~----e~gkdl~~a~~~~~~~~~~~el~~~~~ei~~~  362 (715)
T TIGR01092       287 GERDMAVAARESSRMLQALSSEQRKEILHDIADALEDNEDEILA----ENKKDVAAAQGAGYAASLVARLSMSPSKISSL  362 (715)
T ss_pred             HHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHH----HHhhhHHHHHhcCcchhHHHHHhCCHHHHHHH
Confidence            48888999999999999999999999999999999999999974    6666665443        23455555556666


Q ss_pred             HHHHHHhhcCcccc--Cc---cccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHH
Q 038617           79 LSCLDKWMAPKKRR--LP---LLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASF  153 (484)
Q Consensus        79 ~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~  153 (484)
                      +..++.+.+.....  ..   ....+...+.+++|+|||++|+||| |+.+ ++++++||++||+||+|||+.+|.|+..
T Consensus       363 ~~~l~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t~~~  440 (715)
T TIGR01092       363 AISLRQLAAMEDPIGRVLKRTRIADNLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARSNAI  440 (715)
T ss_pred             HHHHHHHhcCCCcccccccccccCCCceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHHHHH
Confidence            66666554321100  00   0111223467899999999999999 9998 5899999999999999999999999999


Q ss_pred             HHHHhccccCcc----ceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCC
Q 038617          154 LAETIPLYLDCK----AIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSS  228 (484)
Q Consensus       154 l~~~l~~alp~g----~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~  228 (484)
                      |++++.+++|+|    ++|++++..+.++.|..|+ +|+|+||||+.+|+.|++.++   +|+++|+|||||+||++   
T Consensus       441 l~~l~~~alp~g~~~~~~~~v~~~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~---~pv~lElgGk~p~iV~~---  514 (715)
T TIGR01092       441 LHKVITEAIPIHVGKKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK---IPVLGHADGICHVYVDK---  514 (715)
T ss_pred             HHHHHHHHcCCCCCCcEEEEeCChHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC---CCEEEEcCCcceEEECC---
Confidence            999999999987    6899986555677777776 999999999999999998874   99999999999999999   


Q ss_pred             CCCHHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhc
Q 038617          229 PLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKD  308 (484)
Q Consensus       229 daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~  308 (484)
                      |||++.|++.+..++|.  +||.|+|++|||||+++||+                        |        .+.+++++
T Consensus       515 dADl~~A~~~i~~~~~~--~GQ~C~a~~rvlV~~~i~d~------------------------~--------~~~~~v~~  560 (715)
T TIGR01092       515 SASVDMAKRIVRDAKCD--YPAACNAMETLLVHKDLLRN------------------------G--------LLDDLIDM  560 (715)
T ss_pred             CCCHHHHHHHHHHHhCC--CCCccccCcEEEEehhhccc------------------------h--------hHHHHHHH
Confidence            99999998777777765  59999999999999999985                        0        13344444


Q ss_pred             hh-cCCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHH
Q 038617          309 PL-VADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKK  387 (484)
Q Consensus       309 a~-~~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~  387 (484)
                      +. +|+++ +||....  .|+.     ..+++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++
T Consensus       561 ~~~~Ga~l-~Gg~~~~--~~~~-----~~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~~a~  632 (715)
T TIGR01092       561 LRTEGVTI-HGGPRFA--AYLT-----FNISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDENVAE  632 (715)
T ss_pred             HHHCCCEE-ECCcchh--heec-----cCCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHH
Confidence            43 25555 5775432  2332     23578999999999999999999999999999999999999999999999999


Q ss_pred             HHhhccceeeEEECCCccccCCCCCCcccCCCCCCCC----cchHHHHHHhhhccEEEEecCc
Q 038617          388 QIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGR----YHGHYSFETFSHEKAIMQRSFF  446 (484)
Q Consensus       388 ~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~----~~g~~~~~~f~~~k~v~~~~~~  446 (484)
                      +|++++++|.|+||+++.  ..+.+||||+|.||+|+    .+|++++++|++.|+|.+....
T Consensus       633 ~~~~~i~sG~V~vN~~~~--~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~g~g~  693 (715)
T TIGR01092       633 FFLQHVDSAAVFHNASTR--FSDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWLLRGKGQ  693 (715)
T ss_pred             HHHHhCCeeEEEEeCCCC--CCCCCCCcCccccccccCCCCCCChhHHHHhceEEEEEECCCe
Confidence            999999999999998754  34678999999999995    4799999999999999887643


No 128
>TIGR00407 proA gamma-glutamyl phosphate reductase. The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.
Probab=100.00  E-value=3.7e-68  Score=539.69  Aligned_cols=374  Identities=20%  Similarity=0.198  Sum_probs=310.6

Q ss_pred             HHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHH------HHHHcCCCh------hhhhHHHHHHHHHHHHHHHHHH
Q 038617           15 LRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKA------LHQDLGKHP------VETYRDEIGLIKKSAKYALSCL   82 (484)
Q Consensus        15 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~------~~~e~Gk~~------~ea~~~ev~~~~~~~~~~~~~~   82 (484)
                      |++||+.|+++|.++|.++|++++++|++++++|+++      +++|+|||.      .++. .|+..+++.++++++..
T Consensus         1 a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~-~ev~~~~~~~~~~a~~a   79 (398)
T TIGR00407         1 AKQAANILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTE-GRLKGIADGVKDVIELA   79 (398)
T ss_pred             ChhHHHHHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCH-HHHHHHHHHHHHHhcCC
Confidence            5789999999999999999999999999999999999      999999993      2344 48999999999888766


Q ss_pred             HHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHh----
Q 038617           83 DKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI----  158 (484)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l----  158 (484)
                      +.+ + +.........+...+++++|+|||++|+||| | ..+++++++||++||+||+|||+.+|.++..+++++    
T Consensus        80 ~~~-g-~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al  155 (398)
T TIGR00407        80 DPV-G-KVIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDAL  155 (398)
T ss_pred             CCC-c-ccccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHH
Confidence            432 2 1111100112446688999999999999997 6 678889999999999999999999999999999995    


Q ss_pred             ccc-cCccceeeccC-Chh-HHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHH
Q 038617          159 PLY-LDCKAIKVTNG-GVD-VCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKV  234 (484)
Q Consensus       159 ~~a-lp~g~v~~v~g-~~~-~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~  234 (484)
                      .++ +|+|++|+++| +.+ .++.|..|+ ||+|+||||+.+|+.+++.   ..+|+++|+|||||+||++   |||++.
T Consensus       156 ~eaGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~---~~~~~~~e~gGk~p~iV~~---dADl~~  229 (398)
T TIGR00407       156 AQTGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQT---STIPVLGHGDGICHIYLDE---SADLIK  229 (398)
T ss_pred             HHcCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHh---CCCCEEEecCCcceEEEeC---CCCHHH
Confidence            477 99999999997 554 677788887 9999999999999988764   3589999999999999999   999999


Q ss_pred             HHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCc
Q 038617          235 TVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADA  314 (484)
Q Consensus       235 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~  314 (484)
                      |++.+++++|. + ||.|++++|+|||+++||+|+++|++++.++..       .+++      .+.+.+++..      
T Consensus       230 Aa~~iv~~~~~-~-GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~-------~~~~------~~~i~~~v~~------  288 (398)
T TIGR00407       230 AIKVIVNAKTQ-R-PSTCNAIETLLVNKAIAREFLPVLENQLLEKGV-------TIHA------DAYALKLLEL------  288 (398)
T ss_pred             HHHHHHhhhcC-C-CCcccccceEEEeHHHHHHHHHHHHHHHHhcCC-------EEec------CHHHHHHHhc------
Confidence            99999999997 6 999999999999999999999999999987532       1221      1334444431      


Q ss_pred             eeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccc
Q 038617          315 IVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTS  394 (484)
Q Consensus       315 ~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~  394 (484)
                         ||          ||++ +  .+|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+++++++++++
T Consensus       289 ---g~----------~tv~-~--~~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i~  352 (398)
T TIGR00407       289 ---GP----------ATEA-I--VCKTDFDKEFLSLDLSVKIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQNGVD  352 (398)
T ss_pred             ---cC----------cccc-c--cccccccchhhCceeEEEEECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHHhCC
Confidence               11          3554 2  337899999999999999999999999999999999999999999999999999999


Q ss_pred             eeeEEECCCccccCCCCCCcccCCC----CCCCCcchHHHHHHhhhcc
Q 038617          395 SGSLIFNDTLVQQLCDVLPFGGVGQ----SGIGRYHGHYSFETFSHEK  438 (484)
Q Consensus       395 ~g~v~iN~~~~~~~~~~~pfGG~~~----SG~G~~~g~~~~~~f~~~k  438 (484)
                      +|.|+||+++.  ..+..|||=-..    ++.....|+.+++.|+..|
T Consensus       353 ~G~v~iN~~~~--~~~~~pfG~~~~~~~~~~~~~~rg~~~~~~~~~~~  398 (398)
T TIGR00407       353 SAAVYHNASTR--FTDGFRFGFGAEVGISTQKLHARGPMGLEALTSYK  398 (398)
T ss_pred             eeEEEEeCCCC--cCCCcccccceeeEEecCCCcCCCCcCHHHhcCCC
Confidence            99999999875  345578872222    2234556999999998765


No 129
>KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism]
Probab=100.00  E-value=3e-66  Score=500.48  Aligned_cols=415  Identities=22%  Similarity=0.312  Sum_probs=370.3

Q ss_pred             CCCHHHHHHHHHHHHHHhH--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617            2 AAAMGEIEDKLAELRQTFR--SGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL   79 (484)
Q Consensus         2 ~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~   79 (484)
                      .++..|+++|+++|+.||.  .|++++.++|.+.|.++++++++|.++|+.+.+.|.|.-..-+...-+...++.++|++
T Consensus       455 la~v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h~eelat~e~ldagavytlalkthvgmsi~~~ryfa  534 (881)
T KOG2452|consen  455 LAQVTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFA  534 (881)
T ss_pred             hhHhhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhccchhhhhhhccccceeeeeehhhcCceehHHHHhh
Confidence            3677899999999999997  49999999999999999999999999999999999997666555556778889999999


Q ss_pred             HHHHHhhcCccccCc-cccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHh
Q 038617           80 SCLDKWMAPKKRRLP-LLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI  158 (484)
Q Consensus        80 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l  158 (484)
                      ...++..+ ...+.. .+.....+.+.++|+||+++|.|||||+..+.|+.+.+|++-              ...+++  
T Consensus       535 gwcdkiqg-~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmmlswk~aaclaa~--------------~~k~~e--  597 (881)
T KOG2452|consen  535 GWCDKIQG-STIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSWKTAACLAAQ--------------VLKFAE--  597 (881)
T ss_pred             hhhhhccC-ceeccccCCCCCcceeeecCcceeEEEeccCCchHHHHHHHHHHHHHHH--------------Hhhhhh--
Confidence            88777533 222221 122234668899999999999999999999999999988862              112222  


Q ss_pred             ccccCccceeeccCC-hhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhc-ccCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617          159 PLYLDCKAIKVTNGG-VDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAK-HLTPVTLELGGKCPAILDTLSSPLDIKVT  235 (484)
Q Consensus       159 ~~alp~g~v~~v~g~-~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~-~~~~~~lelgG~~p~iV~~~~~daDl~~a  235 (484)
                          -.|++|+++|+ .-+++.|..|| |+.|-||||+++|+.|++.|+. +.|++.+|+||++|+||+.   |||+++|
T Consensus       598 ----~sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~im~sca~snikkvslelgg~sp~iifa---d~dl~ka  670 (881)
T KOG2452|consen  598 ----LTGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAISNVKKVSLELGGESPFIIFA---DCDLNKA  670 (881)
T ss_pred             ----hcceEEEecCCcchhccccccCCccceeccccchHHHHHHHHHHhhcchheeeeeccCCCceEEEe---cCcHHHH
Confidence                25899999995 55789999998 9999999999999999998874 6799999999999999999   9999999


Q ss_pred             HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CC
Q 038617          236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-AD  313 (484)
Q Consensus       236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~  313 (484)
                      ++....+.|+ +-|..|++..|+||.++|.|+|+.++.++++++.+|+| |.+++-||--...|..++.+|++.+.. |+
T Consensus       671 v~~~~~~vff-~kgenciaagr~fi~~sihd~fv~~~vee~~~~~ig~pldr~t~hgpqnh~ahl~kl~ey~~~~v~~ga  749 (881)
T KOG2452|consen  671 VQMGMSSVFF-SKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGNPLDRDTDHGPQNHHAHLVKLMEYCQHGVKEGA  749 (881)
T ss_pred             HHhhccceee-cCCcchhhhcceeehhhhhHHHHHHHHHHHHhhccCCcccccccCCchhHHHHHHHHHHHHHHHhccCc
Confidence            9999999999 99999999999999999999999999999999999999 999999999999999999999999875 67


Q ss_pred             ceeeCCCc-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeC--CHHHHHHHHhcCCCCceEEEecCCHHHHHHHh
Q 038617          314 AIVHGGLL-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLN--NIQESIEFINSRPKPLAIYAFTKDETFKKQIV  390 (484)
Q Consensus       314 ~~~~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~--~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~  390 (484)
                      ++++||.. +..|.|++|||+++++.+|.+..||-||||+.|.+|+  |+|++++.+|++++||+++|||+|.....+++
T Consensus       750 ~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d~d~~~vl~ran~tefgla~gvftrd~~k~l~v~  829 (881)
T KOG2452|consen  750 TLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGDLDAVLSRANATEFGLASGVFTRDINKALYVS  829 (881)
T ss_pred             EEEECCccCCCCCcccCCeeecccchhhhhhhccccCceEEEEecCCCCHHHHHhhccccccccccceeecccchhhhhh
Confidence            99999976 5679999999999999999999999999999999997  58899999999999999999999999999999


Q ss_pred             hccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617          391 SGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR  443 (484)
Q Consensus       391 ~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~  443 (484)
                      +.+.+|+|+||...-  .+...||||+|+||+|...|...+.+|...|+|++.
T Consensus       830 ~~l~agtvfvnty~k--tdvaapfggfkqsgfgkd~ge~alneyl~~ktit~e  880 (881)
T KOG2452|consen  830 DKLQAGTVFVNTYNK--TDVAAPFGGFKQSGFGKDLGEAALNEYLRVKTVTFE  880 (881)
T ss_pred             hhhccceEEEeeccc--cccccCCCCccccccccchhHHHHhhheeeEEEEee
Confidence            999999999998653  356789999999999999999999999999998763


No 130
>KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism]
Probab=100.00  E-value=3.3e-65  Score=490.24  Aligned_cols=444  Identities=21%  Similarity=0.286  Sum_probs=391.9

Q ss_pred             CCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHH-hcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            3 AAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQ-DNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         3 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~-~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      |+..++++||++|.+|++.|...|..+|.++++++|+++. +++-+|....+.-.||+..++.++-+...++.+|+.+..
T Consensus        93 A~~k~ie~AIkaAl~a~~~W~~~PiadR~aI~lkAAdlistkyr~~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~y  172 (561)
T KOG2455|consen   93 ATKKQIEKAIKAALSAQKTWELVPIADRLAIFLKAADLISTKYRYDLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKY  172 (561)
T ss_pred             ccHHHHHHHHHHHHhhcCccccCcHHHHHHHHHHHHHHhcchHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHH
Confidence            6789999999999999999999999999999999999999 788999999999999999998776577788888988888


Q ss_pred             HHHhhcCccccCccccCCCcceEEeecc-eEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhcc
Q 038617           82 LDKWMAPKKRRLPLLFFPASGEVVSEPF-GVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPL  160 (484)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~  160 (484)
                      +..+...+...   ...+..+..++.|+ |-|++|+||||-....-...+|||+ ||+|++|||..+.++...+.++|+|
T Consensus       173 a~eL~~~qpi~---~~~~t~ns~~yRpleGFVaAisPFnftAI~gnLa~aPaLM-GN~VLwkPS~ta~lssYii~~il~E  248 (561)
T KOG2455|consen  173 ASELYAQQPIS---QTKGTWNSMEYRPLEGFVAAISPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAALSSYIIYRILRE  248 (561)
T ss_pred             HHHhhhcCCcc---ccCCCCcceeeccccceeEEecccceeeeccccccChhhh-cceeeecccchhHHHHHHHHHHHHH
Confidence            88776655322   13455677788888 9999999999997666666677765 9999999999999999999999999


Q ss_pred             c-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccc------CceeeecCCcCceEEcCCCCCCC
Q 038617          161 Y-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHL------TPVTLELGGKCPAILDTLSSPLD  231 (484)
Q Consensus       161 a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~------~~~~lelgG~~p~iV~~~~~daD  231 (484)
                      | +|+|++|+|++ +...++.+..++ ...+.||||+.+-+++.+..++++      -+++.|+||||.-+|++   +||
T Consensus       249 AGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk~lwk~V~~n~~~Y~~fPrlvgEcgGkNFHfVH~---SA~  325 (561)
T KOG2455|consen  249 AGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFKHLWKKVGENVDNYRTFPRLVGECGGKNFHFVHA---SAD  325 (561)
T ss_pred             cCCCccceeeccCCCCeecceeccCcccceeeeecccHHHHHHHHHHHhhhhhhhcchhhhccCCCcceEEecc---ccc
Confidence            9 99999999999 566789998887 999999999999999988776653      58899999999999999   999


Q ss_pred             HHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC--CCCCccccccCHHHHHHHHHHhhch
Q 038617          232 IKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP--KDSKSISRIINEYHFERLRKLLKDP  309 (484)
Q Consensus       232 l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~--~~~~~~gpli~~~~~~~~~~~i~~a  309 (484)
                      ++.++...++++|. .+||.|++.+|+||+++.++.+.+.|.+.-+++++|||  |.++.+||+|+.+.+.|++++|+.+
T Consensus       326 VesvV~~TvrsAfe-y~GQkcsA~SRmYvp~s~wp~i~e~l~~~~~q~~igd~~~d~~~f~gavIh~~sF~rl~k~le~a  404 (561)
T KOG2455|consen  326 VESVVSSTVRSAFE-YQGQKCSACSRMYVPESLWPQIREELVEEHSQLKIGDPVIDFSTFIGAVIHDKSFARLKKVLEHA  404 (561)
T ss_pred             hHHHHHHHHHHHHh-hcccccchhhhcccchhhcHHHHHHHHHHHhhcccCCccccccchhhhhccHHHHHHHHHHHHhh
Confidence            99999999999999 99999999999999999999999999999999999997  7789999999999999999999998


Q ss_pred             hc--CCceeeCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCC--HHHHHHHHhc-CCCCceEEEecCCH
Q 038617          310 LV--ADAIVHGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNN--IQESIEFINS-RPKPLAIYAFTKDE  383 (484)
Q Consensus       310 ~~--~~~~~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~--~~eai~~~n~-~~~gl~a~v~t~d~  383 (484)
                      ..  ...+++||..+ ..|+|+.|||+...+|.++++.||+|||||+|+.|+|  ++|+++++.+ ++||||.+||++|.
T Consensus       405 k~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ee~fGPvLsVyvY~Dd~~~E~l~lv~~tt~YaLTGaiFaqd~  484 (561)
T KOG2455|consen  405 KKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTEEIFGPVLSVYVYEDDKFDEVLKLVDNTTPYALTGAIFAQDR  484 (561)
T ss_pred             ccCccceeeecCcccCCCCeeecceEEEccCCCcchhhhhccCceeEEEEeccccHHHHHHHHhcCCcceeccccccccH
Confidence            74  35789999874 5799999999999999999999999999999999975  7899998854 89999999999999


Q ss_pred             HHHHHHhhccc--eeeEEECCCccccCCCCCCcccCCCCCCCC-cchHHHHHHhhhccEEEEecCcCCCCCCCCC
Q 038617          384 TFKKQIVSGTS--SGSLIFNDTLVQQLCDVLPFGGVGQSGIGR-YHGHYSFETFSHEKAIMQRSFFLELEPRYPP  455 (484)
Q Consensus       384 ~~~~~~~~~l~--~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~-~~g~~~~~~f~~~k~v~~~~~~~~~~~~~~p  455 (484)
                      +.+.+..++++  +|+.|||+-.++......||||...||+.- -+|+.-+..|+.+++|-.. +-...+++||.
T Consensus       485 ~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SGTNDKaGgp~~l~RwtSp~~ikEt-~~~l~d~~yp~  558 (561)
T KOG2455|consen  485 EVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLSGTNDKAGGPHYLLRWTSPLSIKET-FVPLTDVKYPS  558 (561)
T ss_pred             HHHHHHHHHHHhhhcceEEccccccceeeccccCcccccCCCCCCCCceEEEeecCcchhhhc-ccCCcccCcCC
Confidence            99999998776  899999998888778899999999999984 4677778888877765332 22234566653


No 131
>KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00  E-value=8.8e-64  Score=465.30  Aligned_cols=432  Identities=22%  Similarity=0.284  Sum_probs=390.7

Q ss_pred             CCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHH
Q 038617            3 AAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCL   82 (484)
Q Consensus         3 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~   82 (484)
                      ++.+|.+.+++.|++|++.|-..|...|.++++++.+.|+...+-|-+++++|+||-..|.. +|++.-++.++|+...-
T Consensus        52 asv~dye~~~k~a~ea~kiw~~vpapkrgeivrqigdalr~klq~lg~lvslemgkilaegv-gevqeyvdicdyavgls  130 (507)
T KOG2453|consen   52 ASVQDYEIAIKEAKEAYKIWCEVPAPKRGEIVRQIGDALRTKLQNLGKLVSLEMGKILAEGV-GEVQEYVDICDYAVGLS  130 (507)
T ss_pred             ccHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhHhhhcc-hhHHHHHHHHHHhhhhh
Confidence            57789999999999999999999999999999999999999999999999999999999886 59999999999888766


Q ss_pred             HHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc---
Q 038617           83 DKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP---  159 (484)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~---  159 (484)
                      +.+-+ ..  .+....+......|-|+|+|++|+.+|||...--|.-+.|+.+||+|++||+|.+|+++....+++.   
T Consensus       131 r~l~g-~i--~pserpghalleqwnplg~vgvitafnfpcavygwnnaiaMv~gncVvWKpApttpLtTiAvtklIaevL  207 (507)
T KOG2453|consen  131 RSLEG-KI--FPSERPGHALLEQWNPLGVVGVITAFNFPCAVYGWNNAIAMVCGNCVVWKPAPTTPLTTIAVTKLIAEVL  207 (507)
T ss_pred             hhhCC-cc--cCCCCCchhHHHhcCCcceEEEEEeccCCceeeccCchhhhhhcceeEecCCCCcceeHHHHHHHHHHHH
Confidence            55433 22  1222233445668999999999999999999999999999999999999999999987766555544   


Q ss_pred             -cc-cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHH
Q 038617          160 -LY-LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTV  236 (484)
Q Consensus       160 -~a-lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa  236 (484)
                       +- +|++.....+|+.+.++++.+.. ++.+.||||++.++.+.+...++..+..||+||||+.||.+   |||+..++
T Consensus       208 ~qnnl~~aicsltcG~aDigrAaakdgRvnlvsftGssQvgKsvgq~vqarfgk~llelggnnaiiv~e---dadl~lvv  284 (507)
T KOG2453|consen  208 EQNNLPGAICSLTCGGADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQVQARFGKLLLELGGNNAIIVNE---DADLNLVV  284 (507)
T ss_pred             hccCCCcceeeecccchhhhhhccccCceeecccccchhhhhHHHHHHHHHhhhHHHhhcCCceEEEec---cccceeee
Confidence             44 89999999999999999999875 99999999999999999888888889999999999999999   99999999


Q ss_pred             HHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchh-cCCc
Q 038617          237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPL-VADA  314 (484)
Q Consensus       237 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~-~~~~  314 (484)
                      ...++++.. .+||+|+..+|++||+++||+.+++|++..+++++|+| |+.+-+||+-++++....+.-++++. ++++
T Consensus       285 ps~lfaavg-tagqrctt~rrl~~hesvyd~vlerlkkayaq~~ignpld~ntl~gplht~qav~~f~~~veeak~~ggk  363 (507)
T KOG2453|consen  285 PSTLFAAVG-TAGQRCTTTRRLIVHESVYDQVLERLKKAYAQFEIGNPLDSNTLIGPLHTQQAVGKFKASVEEAKASGGK  363 (507)
T ss_pred             hHHHHHHhc-ccccchhhhhHHHhhHHHHHHHHHHHHHHHHheecCCcCCCCceeccccCHHHHHHHHHHHHHHHhcCCe
Confidence            999999999 99999999999999999999999999999999999999 99999999999999999999999987 4789


Q ss_pred             eeeCCCc-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh--
Q 038617          315 IVHGGLL-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS--  391 (484)
Q Consensus       315 ~~~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~--  391 (484)
                      +++||+. +.+|+|++|||++ ..+|.++..+|.|.||+.|.+|++++||+.+-|+.+.||++||||+|...+-++..  
T Consensus       364 i~yggkv~er~gnfveptivt-l~hda~vv~~etfapilyvlkf~~~eea~ainnev~qglsssift~n~~nifrw~gpk  442 (507)
T KOG2453|consen  364 IEYGGKVLERDGNFVEPTIVT-LKHDAPVVLRETFAPILYVLKFSTLEEAIAINNEVDQGLSSSIFTTNIQNIFRWMGPK  442 (507)
T ss_pred             EEECCEeeccCCCcccceEEE-ecCCcchhhhhhccceeeEEeccchhhhheeccccccccchhhhhcCHHHHHhhhCCC
Confidence            9999986 5679999999998 88999999999999999999999999999999999999999999999999999976  


Q ss_pred             ccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617          392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS  444 (484)
Q Consensus       392 ~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~  444 (484)
                      .-++|.|.||-++.+ ..-.-.|||.|.+|.||+.|.++.++|+++.+.+++.
T Consensus       443 gsdcgivnvniptsg-aeiggafggek~tgggresgsdswkqymrrstctiny  494 (507)
T KOG2453|consen  443 GSDCGIVNVNIPTSG-AEIGGAFGGEKETGGGRESGSDSWKQYMRRSTCTINY  494 (507)
T ss_pred             CCccceEEecCCCCc-hhhcccccCccccCCCcccCchHHHHHHhhceeeeec
Confidence            457899999988765 3455679999999999999999999999998887764


No 132
>COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]
Probab=100.00  E-value=4.5e-39  Score=310.84  Aligned_cols=392  Identities=19%  Similarity=0.206  Sum_probs=316.2

Q ss_pred             HHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcC----CChhhhhHHHHHHHHHHHHHHHHH
Q 038617            6 GEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLG----KHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         6 ~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~G----k~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      .++.+..++|++|......++.++|.+.|.++++.|+++.++|.++..+|.-    ..+.++..+.+.+.-..++..++-
T Consensus         3 ~~~~~~~~~Ak~A~~~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma~g   82 (417)
T COG0014           3 SELEELGKRAKAASRKLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMADG   82 (417)
T ss_pred             hHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHHHH
Confidence            4677888999999999999999999999999999999999999998877743    234455555666666677777666


Q ss_pred             HHHhhc---C--ccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHH
Q 038617           82 LDKWMA---P--KKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAE  156 (484)
Q Consensus        82 ~~~~~~---~--~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~  156 (484)
                      +++...   |  +.........+......|+|+||+++|  |....+.+....+.+|++||+||||.+..+..+...+++
T Consensus        83 l~~Va~L~DPvGev~~~~~~~nGL~i~~~rvPLGVigvI--YEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai~~  160 (417)
T COG0014          83 LRQVAALPDPVGEVIDGWTLPNGLQIYRVRVPLGVIGVI--YESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAIVE  160 (417)
T ss_pred             HHHHhcCCCchHhhhccccCCCCCEEEEEEccceEEEEE--EecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHHHH
Confidence            665432   1  111122334556778899999999999  999999999999999999999999999999999999999


Q ss_pred             Hhccc-----cCccceeeccC-ChhHHHHHHhCC--CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCC
Q 038617          157 TIPLY-----LDCKAIKVTNG-GVDVCEQLLQQK--WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSS  228 (484)
Q Consensus       157 ~l~~a-----lp~g~v~~v~g-~~~~~~~L~~~~--vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~  228 (484)
                      +++++     +|.+.||+++. +++....|++.+  ||+|+..||....+.+.+.+.   .|++-.+-|++.++|++   
T Consensus       161 ~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a~---vPVi~~~~G~CHiyvd~---  234 (417)
T COG0014         161 VIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENAT---VPVIEHGVGNCHIYVDE---  234 (417)
T ss_pred             HHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCCc---CCEEecCcceEEEEecc---
Confidence            88763     79999999998 778888888764  999999999999888887663   67777777999999999   


Q ss_pred             CCCHHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhc
Q 038617          229 PLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKD  308 (484)
Q Consensus       229 daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~  308 (484)
                      +||+|+|.+-++.+++. ..+ .|++.+.++||+.++++|+..|.+.+....+.-.  .       +    +...+++.+
T Consensus       235 ~ADld~A~~ii~nAKtq-rPs-~CNA~EtLLVh~~ia~~fLp~l~~~l~~~gvelr--~-------d----~~~~~~~~~  299 (417)
T COG0014         235 SADLDKALKIIVNAKTQ-RPS-VCNAAETLLVHRAIAKSFLPKLANALQEAGVELR--G-------D----AEALALLPD  299 (417)
T ss_pred             cCCHHHHHHHHHcccCC-CCc-ccchHHHHHcCHHHHHHhHHHHHHHHHhcCeEEE--c-------C----HHHHHhccc
Confidence            99999999999999997 554 9999999999999999999999888873211000  0       0    011111110


Q ss_pred             hhcCCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHH
Q 038617          309 PLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQ  388 (484)
Q Consensus       309 a~~~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~  388 (484)
                      .               +          .+....-+..|...++++|..++++|+||+++|..+.+||-+|.|+|...+++
T Consensus       300 ~---------------~----------~~A~e~Dw~tEyLd~ilavkvVd~ld~AI~HIn~y~S~HsdaIiTe~~~~a~~  354 (417)
T COG0014         300 A---------------V----------KPATEEDWDTEYLDLILAVKVVDSLDEAIAHINTYGSGHSDAIITEDYANAER  354 (417)
T ss_pred             c---------------C----------CCCchhhHHHHhhhheeEEEEeCCHHHHHHHHHHhCCCCCcceeeCCHHHHHH
Confidence            0               0          11222236789999999999999999999999999999999999999999999


Q ss_pred             HhhccceeeEEECCCccccCCCCCCcccCCCCCC--CCcchHHHHHHhhhccEEEEecC
Q 038617          389 IVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGI--GRYHGHYSFETFSHEKAIMQRSF  445 (484)
Q Consensus       389 ~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~--G~~~g~~~~~~f~~~k~v~~~~~  445 (484)
                      |.+++++..||||.++.+.+...+.||..-.-.+  .+-.|+-|++++|..|++.....
T Consensus       355 F~~~VDSAaVyvNASTRFtDG~~fG~GaEiGISTqKlHARGPmGLe~LTs~Kyiv~G~G  413 (417)
T COG0014         355 FVNEVDSAAVYVNASTRFTDGGQFGLGAEIGISTQKLHARGPMGLEALTSYKYIVRGDG  413 (417)
T ss_pred             HHhhcchheEEEecccccccCccccCceEEEeecCcccCCCCCChhhhcceeEEEeCCc
Confidence            9999999999999999888888888887533333  34569999999999999987654


No 133
>cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde  substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN.
Probab=100.00  E-value=6.9e-36  Score=307.30  Aligned_cols=363  Identities=13%  Similarity=0.122  Sum_probs=249.4

Q ss_pred             CHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHh----cHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHH--
Q 038617            4 AMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQD----NEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKY--   77 (484)
Q Consensus         4 ~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~----~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~--   77 (484)
                      +.+++++.++..+...+....++.++..+.+.++++.+..    .+.+..+.+..-+|.+..+-. ..+......++.  
T Consensus         3 ~~~~~~~~~~~l~~~~~~~~~~~~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~-~a~~~l~~~~~r~~   81 (422)
T cd07080           3 SAPDLDALIEELRLNRRALAALPVEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEMLR-EGLKRLMALFRREN   81 (422)
T ss_pred             CHHHHHHHHHHHHhhHHhHhcCCHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHHHH-HHHHHHHHHcCHHH
Confidence            3455666666666555556667777777777777776642    345555556666666643322 122222222210  


Q ss_pred             HHHHHHHhhc-CccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHH
Q 038617           78 ALSCLDKWMA-PKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAE  156 (484)
Q Consensus        78 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~  156 (484)
                      .-..+...++ ....+.. ...+...+++++|+||+++|+|||||+ +.++.+++||++||++|+|||+.+|.++..|.+
T Consensus        82 l~~~l~~el~~~~~Ld~w-~~~~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~  159 (422)
T cd07080          82 LERILERELGSPGILDEW-VPPGRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLR  159 (422)
T ss_pred             HHHHHHHhcCCcccccCC-ccCCCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHHH
Confidence            0000011111 0100000 001446688999999999999999999 799999999999999999999999999999999


Q ss_pred             HhccccCc----cceeec--cC-ChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCc-CceEEcCCCC
Q 038617          157 TIPLYLDC----KAIKVT--NG-GVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGK-CPAILDTLSS  228 (484)
Q Consensus       157 ~l~~alp~----g~v~~v--~g-~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~-~p~iV~~~~~  228 (484)
                      +|.+++|+    +.++++  +| +.+.++.|++++ |.|+||||+++++.|++.++.+  +.++|+||| +++|+++   
T Consensus       160 ~l~~~~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~-D~i~~~Gs~~~~~~i~~~a~~~--~~~Le~Ggk~s~~vi~~---  233 (422)
T cd07080         160 SLADVDPNHPLTDSISVVYWPGGDAELEERILASA-DAVVAWGGEEAVKAIRSLLPPG--CRLIDFGPKYSFAVIDR---  233 (422)
T ss_pred             HHHhcCCCCcccceEEEEEecCCchHHHHHHHHhC-CEEEEeCCHHHHHHHHHhCCCC--CeeeecCCceeEEEecH---
Confidence            99999888    888888  46 445888899888 9999999999999999988754  569999999 6666666   


Q ss_pred             CC----CHHHHHHHHHHhhcccCCCCccccCCceEEccch---HHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHH
Q 038617          229 PL----DIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKF---AATLIESLKTTIKKFYGENPKDSKSISRIINEYHFER  301 (484)
Q Consensus       229 da----Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i---~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~  301 (484)
                      ++    |++.+++.++++++. |+||.|+|+++||||+++   +++|.++|.++++++....|..     ++ +.....+
T Consensus       234 ~a~~~~dl~~aa~~~a~~~~~-~~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p~~-----~~-~~~~~~~  306 (422)
T cd07080         234 EALESEKLAEVADALAEDICR-YDQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYPAL-----SL-SAAESAK  306 (422)
T ss_pred             HhhccccHHHHHHHHHHHHHH-HhhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCCCC-----CC-CHHHHHH
Confidence            78    999999999999999 999999999999999999   9999999999999875433311     11 2223333


Q ss_pred             HHHHhhchh-cCCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEec
Q 038617          302 LRKLLKDPL-VADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFT  380 (484)
Q Consensus       302 ~~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t  380 (484)
                      +...-..+. .+......   ...++    +|+....+.  + .....+=.+.|.++++++|++..++.  +=-|.+++.
T Consensus       307 ~~~~r~~~~~~~~~~~~~---~~~~~----~v~~~~~~~--~-~~~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~~  374 (422)
T cd07080         307 IARARLEAEFYELKGGVS---RDLGW----TVIISDEIG--L-EASPLNRTVNVKPVASLDDVLRPVTP--YLQTVGLAP  374 (422)
T ss_pred             HHHHHHHHHHHHHhcCCC---CCCCe----EEEEeCCCC--c-cCCCCcCEEEEEEcchHHHHHHhhhh--hcceeEeec
Confidence            322211111 11111101   11122    333332222  1 11455568889999999999999986  667999999


Q ss_pred             CCHHHHHHHhhccce
Q 038617          381 KDETFKKQIVSGTSS  395 (484)
Q Consensus       381 ~d~~~~~~~~~~l~~  395 (484)
                      .+.+. .++++++..
T Consensus       375 ~~~~~-~~~~~~l~~  388 (422)
T cd07080         375 SPAEL-AELADALAA  388 (422)
T ss_pred             ChhhH-HHHHHHHHH
Confidence            88887 667777753


No 134
>KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]
Probab=99.97  E-value=2.8e-30  Score=241.30  Aligned_cols=385  Identities=19%  Similarity=0.210  Sum_probs=290.8

Q ss_pred             HHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHH------HcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617            8 IEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQ------DLGKHPVETYRDEIGLIKKSAKYALSC   81 (484)
Q Consensus         8 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~------e~Gk~~~ea~~~ev~~~~~~~~~~~~~   81 (484)
                      +++..+.||++.+..+.++.++|.++|.+++++|..+..++..+...      |.|  +.++....+...-..+......
T Consensus         2 ~e~~a~~aR~a~r~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~G--L~~sll~RL~l~~~K~~sl~~g   79 (433)
T KOG4165|consen    2 VEEMAENAREAGRILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAG--LAESLLKRLDLSPGKISSLAAG   79 (433)
T ss_pred             HHHHHHHHHHHhhHHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcC--ccHHHHHHhcCChHHHHHHHHH
Confidence            45667889999999999999999999999999999887777665543      455  3344333444444455555555


Q ss_pred             HHHhhcCc--ccc---CccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHH
Q 038617           82 LDKWMAPK--KRR---LPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAE  156 (484)
Q Consensus        82 ~~~~~~~~--~~~---~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~  156 (484)
                      +++....+  ..+   .....++...+....|+||.++|  |....-....-.+.|+++||.+++|....+..+...|.+
T Consensus        80 ~~~ia~~edpvGRVl~~~~ladgL~L~qvt~PiGvLLVI--FESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~  157 (433)
T KOG4165|consen   80 LRQIAELEDPVGRVLKKTRLADGLELEQVTVPIGVLLVI--FESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALHK  157 (433)
T ss_pred             HHHHHhcccchhhheeeeeccCCceEEEeeccceEEEEE--eccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHH
Confidence            54433211  001   01112344556678899999999  888888888888899999999999999999999999999


Q ss_pred             Hhcccc-----CccceeeccCChhHHHHHHhC-C-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCC
Q 038617          157 TIPLYL-----DCKAIKVTNGGVDVCEQLLQQ-K-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSP  229 (484)
Q Consensus       157 ~l~~al-----p~g~v~~v~g~~~~~~~L~~~-~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~d  229 (484)
                      +.++++     |.+.+|++.. ++....|++. . ||.|+..||+...|.|.+...   .|+.....|.+.++|++   |
T Consensus       158 ~v~~al~~~~~~~~aV~LV~s-REev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~tk---IPVLGHA~GichvYvd~---d  230 (433)
T KOG4165|consen  158 LVQEALGTHGGPGKAVQLVTS-REEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTTK---IPVLGHAEGICHVYVDK---D  230 (433)
T ss_pred             HHHHHhhhccCchhhhhheec-HHHHHHHhhhhhheeEEecCCcHHHHHHHhhccc---CcccccccceeEEEecc---c
Confidence            988863     6778898874 4445556555 4 999999999999999977553   89999999999999999   9


Q ss_pred             CCHHHHHHHHHHhhcccCCCCccccCCceEEccchH-HHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhc
Q 038617          230 LDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFA-ATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKD  308 (484)
Q Consensus       230 aDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~  308 (484)
                      ||+++|.+-+..++..  -.-.|++.+.+++|++.. ..|++.|...+..                              
T Consensus       231 ad~~kA~riv~DaK~d--YPAaCNAmETLLIh~dl~~~~~~~~l~~~l~~------------------------------  278 (433)
T KOG4165|consen  231 ADLDKAKRIVRDAKCD--YPAACNAMETLLIHKDLEQSPFFDDLINMLKE------------------------------  278 (433)
T ss_pred             cCHHHHHHHHhcccCC--CchhhhhHHHHhccHhhhhcchHHHHHHHHHh------------------------------
Confidence            9999999999999985  566999999999999843 4455444443331                              


Q ss_pred             hhcCCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHH
Q 038617          309 PLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQ  388 (484)
Q Consensus       309 a~~~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~  388 (484)
                         ++.-+++|..-.       .++.-.+++..-++.|+-.-.+++-.+++.++||+++|..+.+||-.|.|+|...++.
T Consensus       279 ---~gVtl~agpkl~-------~~l~~~p~e~~s~~~Ey~~l~~~ievV~~v~~Ai~HI~~hgS~HTD~IvTe~~~~Ae~  348 (433)
T KOG4165|consen  279 ---EGVTLHAGPKLA-------ALLKFSPPEAKSFNTEYGSLECTIEVVDSVQSAIDHIHTHGSSHTDCIVTENEATAEH  348 (433)
T ss_pred             ---cCeEEecChhHH-------hhcCcCCchhhhhhhhhcchheeeeecccHHHHHHHHHhcCCcccceEEecCHHHHHH
Confidence               222233332210       0111114455567888888899999999999999999999999999999999999999


Q ss_pred             HhhccceeeEEECCCccccCCCCCCcccCCCCCCCCcc--hHHHHHHhhhccEEEEecC
Q 038617          389 IVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYH--GHYSFETFSHEKAIMQRSF  445 (484)
Q Consensus       389 ~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~--g~~~~~~f~~~k~v~~~~~  445 (484)
                      |.+.+++..|++|.++.+++.-.+.+|..-.-.+++.|  |+.|++..+..||+.....
T Consensus       349 Fl~~VDSa~vf~NASTRFaDGfRfGlGaEVGIST~rIHARGPvGveGLlttkw~lRG~g  407 (433)
T KOG4165|consen  349 FLKHVDSACVFHNASTRFADGFRFGLGAEVGISTSRIHARGPVGVEGLLTTKWLLRGKG  407 (433)
T ss_pred             HHhccchhheeecccccccccccccccceeeeeccceeccCCccccceeeeeeEEecCC
Confidence            99999999999999998655445556654334445554  9999999999999887654


No 135
>PF05893 LuxC:  Acyl-CoA reductase (LuxC);  InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins. The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process
Probab=99.77  E-value=1.6e-15  Score=154.45  Aligned_cols=304  Identities=16%  Similarity=0.178  Sum_probs=197.3

Q ss_pred             ceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccccCc----cceeec--cC-Ch
Q 038617          102 GEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDC----KAIKVT--NG-GV  174 (484)
Q Consensus       102 ~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~alp~----g~v~~v--~g-~~  174 (484)
                      .+..+.|.|+++.|.|.|-|..-.. .++.+|.+||..|+|+|+..+.++..|.+.|.+..|.    ..+.++  ++ +.
T Consensus        81 ~~~~~~p~g~v~Hi~agNvp~~~~~-S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~~~~~~l~~~i~v~~~~~~d~  159 (399)
T PF05893_consen   81 GYVRAFPRGLVFHIAAGNVPLVGFY-SLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEIDPEHPLADSIAVVYWPGGDE  159 (399)
T ss_pred             chhhccCCceEEEEcCCCccchHHH-HHHHHHHhCCceEEECCCCchhHHHHHHHHHHhhCccchhhhcEEEEEecCCch
Confidence            5678999999999999999987655 5778999999999999999999999999999887664    345566  34 44


Q ss_pred             hHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHhhcccCCCCcccc
Q 038617          175 DVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVG  254 (484)
Q Consensus       175 ~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~~~~~~~Gq~C~a  254 (484)
                      +..+.+. ...|.|+.+||.++.+.+.+.. ...++.+....-.+-.+|+.   +++++.+++.+..-.+. ..+|.|.|
T Consensus       160 ~~~~~~~-~~~D~vv~wGgd~ti~~ir~~~-~~~~~~i~fg~k~S~avi~~---~~~~~~~a~~~a~Di~~-~dQ~aCsS  233 (399)
T PF05893_consen  160 ELEEALS-QQADAVVAWGGDETIRAIRQPL-PPGARLIEFGPKYSFAVIDA---EAELEEAARRLANDIFL-FDQQACSS  233 (399)
T ss_pred             HHHHHHH-HHCCEEEEeCCHHHHHHHHHHc-CCCCcEeeeCCceEEEEEcC---chhHHHHHHHHHHHHHH-hhCcccCC
Confidence            5555555 3479999999999999998833 33344444445558889998   88999999999999999 99999999


Q ss_pred             CCceEEc---cchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHH--hhchhcCCceeeCCCcCCCCCeee
Q 038617          255 VDYILVE---KKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKL--LKDPLVADAIVHGGLLDKENLFIE  329 (484)
Q Consensus       255 ~~~v~V~---~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~--i~~a~~~~~~~~gg~~~~~g~~~~  329 (484)
                      ++.+||.   ..-.++|.++|.+++.+..-.-|.....   .-...........  +..+..+..-+.++..   +.+  
T Consensus       234 p~~ifv~~g~~~~~~~f~~~L~~~L~~~~~~~p~~~~s---~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~---~~~--  305 (399)
T PF05893_consen  234 PQVIFVETGDGDSVEEFAERLAEALERAAERYPRGELS---IDEAAAISSLRAEAELRYALDGEYRVWSSDD---NSW--  305 (399)
T ss_pred             CeEEEEECCCcccHHHHHHHHHHHHHHHHHhCCCcCCC---HHHHHHHHHHHHHHHHHHHhcCCcceeecCC---CCE--
Confidence            9999999   3345788888877777543111110000   0011111122121  1122222322222221   112  


Q ss_pred             eEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcc-ceeeEEECCCccccC
Q 038617          330 PTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGT-SSGSLIFNDTLVQQL  408 (484)
Q Consensus       330 Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l-~~g~v~iN~~~~~~~  408 (484)
                       ||+....+   ......++-.+.|.++++++|++..++....=-|.+++... +....+++.+ ..|.-.|=.      
T Consensus       306 -~V~~~~~~---~~~~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~~-~~~~~~~~~l~~~Gv~Riv~------  374 (399)
T PF05893_consen  306 -TVIVSPEP---PLLPSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPWS-ERLEELARALAAAGVDRIVP------  374 (399)
T ss_pred             -EEEECCCc---ccccCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecCh-hhHHHHHHHHHhcCCeeeCC------
Confidence             45543221   12334456688999999999999999988442477886554 4445555533 344333321      


Q ss_pred             CCCCCcccCCCCCC-CCcchHHHHHHhhh
Q 038617          409 CDVLPFGGVGQSGI-GRYHGHYSFETFSH  436 (484)
Q Consensus       409 ~~~~pfGG~~~SG~-G~~~g~~~~~~f~~  436 (484)
                           .|-+..--. +.+-|.+.+..|++
T Consensus       375 -----~G~m~~~~~g~~hDG~~~L~~lvR  398 (399)
T PF05893_consen  375 -----LGQMLDFDPGWPHDGMYPLRRLVR  398 (399)
T ss_pred             -----CCcCCCCCCCCCcCCHhHHHHHhC
Confidence                 222111111 23447788887774


No 136
>KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism]
Probab=99.49  E-value=6.9e-14  Score=115.66  Aligned_cols=145  Identities=22%  Similarity=0.261  Sum_probs=114.7

Q ss_pred             HHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchh--cCCceeeCCCcCCCCCeeeeEEEeCCCCCCc
Q 038617          265 AATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPL--VADAIVHGGLLDKENLFIEPTILLDPPLDAE  341 (484)
Q Consensus       265 ~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~--~~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~  341 (484)
                      .....+.|++..+.+++.+. .+++|.     .+...|+.++++.-.  ++-.+..-|  -.+|+|..||+|. ++|+|.
T Consensus         8 aksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS~~~~~~r~~yl~~--ya~~~f~~~tiLs-vtP~ms   79 (157)
T KOG2449|consen    8 AKSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQSEDPLDGRFIYLPG--YAEGNFVGPTILS-VTPNMS   79 (157)
T ss_pred             hhhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcCcCccCCceEEeec--cccCCcccceEEE-ecCCcc
Confidence            35667778888888877655 556666     667788999987631  111121111  2478999999998 999999


Q ss_pred             ccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEEECCCccccCCCCCCcccCC
Q 038617          342 IMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVG  418 (484)
Q Consensus       342 i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~  418 (484)
                      ++.||+||||+....-++++|+|.++|+++||....|||.|.+.++.+....++|.|-+|.+.. ...+...|.|.+
T Consensus        80 ~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ip-~ilk~~sfsg~~  155 (157)
T KOG2449|consen   80 CYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPIP-VILKMFSFSGDR  155 (157)
T ss_pred             eeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceecccccc-ccccceeccccC
Confidence            9999999999999999999999999999999999999999999999999999999999998653 234445565543


No 137
>PF07368 DUF1487:  Protein of unknown function (DUF1487);  InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster. The function of this family is unknown.
Probab=99.14  E-value=6.6e-10  Score=101.18  Aligned_cols=164  Identities=13%  Similarity=0.138  Sum_probs=124.8

Q ss_pred             CceEEcCCCCCCCHHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHH
Q 038617          219 CPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYH  298 (484)
Q Consensus       219 ~p~iV~~~~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~  298 (484)
                      .-+||++   |.|++.|+..++.+.-   ..-...+.-.|+|||++.|+|+++++.+++.+.     +     .+-+...
T Consensus         6 ~lMIvfe---~GDlnsA~~~L~~sl~---~Pf~~~~VatVlVqEsireefi~rvr~~m~pl~-----~-----~va~Hpn   69 (215)
T PF07368_consen    6 QLMIVFE---DGDLNSAMHYLLESLH---NPFAPGAVATVLVQESIREEFIERVRSRMKPLS-----P-----QVANHPN   69 (215)
T ss_pred             eEEEEEe---CCCHHHHHHHHHHHHh---CcccCCcEEEEEEeHHHHHHHHHHHHHhCccCC-----h-----hhccCcH
Confidence            4489999   9999999999999984   455667888999999999999999998887542     1     1222334


Q ss_pred             HHHHHHHhhchhcCCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcC--CCCceE
Q 038617          299 FERLRKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSR--PKPLAI  376 (484)
Q Consensus       299 ~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~--~~gl~a  376 (484)
                      +.|..+.++..  +.+++.++... .-..-.|.++.+++...  +.. --.+|+++.+|++..||++++++.  +++ +.
T Consensus        70 y~rsl~~i~~l--~~~~I~~~~~~-~~~~aSPilV~d~~h~~--fg~-~PTgViTlhtFRt~~Ea~~l~~kE~l~f~-SV  142 (215)
T PF07368_consen   70 YLRSLKKIKCL--NAKTIVADFEN-VPPPASPILVCDFTHSY--FGD-GPTGVITLHTFRTPKEAIELCAKETLPFD-SV  142 (215)
T ss_pred             HHHHHHHHHhc--CCeEEEecccC-CCCCCCCEEEcCCCHHH--cCC-CCCeEEEEEccCCHHHHHHHHhcCCCCcc-eE
Confidence            55666666553  66777764321 11233688998876542  222 333799999999999999999984  455 99


Q ss_pred             EEecCCHHHHHHHhhccceeeEEECCCcc
Q 038617          377 YAFTKDETFKKQIVSGTSSGSLIFNDTLV  405 (484)
Q Consensus       377 ~v~t~d~~~~~~~~~~l~~g~v~iN~~~~  405 (484)
                      +||++..+.+-+++.+++...++||+...
T Consensus       143 siW~ekla~~Yel~~~l~~~~f~iNC~~V  171 (215)
T PF07368_consen  143 SIWNEKLASAYELAARLPCDTFYINCFNV  171 (215)
T ss_pred             EEeCcHHHHHHHHHHhCCCCEEEEEeccC
Confidence            99999999999999999999999998764


No 138
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=98.33  E-value=1.5e-06  Score=99.84  Aligned_cols=97  Identities=20%  Similarity=0.143  Sum_probs=75.8

Q ss_pred             cCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccccCccceeeccCChhH
Q 038617           97 FFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDV  176 (484)
Q Consensus        97 ~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~alp~g~v~~v~g~~~~  176 (484)
                      ..|+.+..+..|+|+++||+|||   ...+..++.||++||+||+||++.++.   .+.     .+|..+.+.+    ..
T Consensus      1067 PTGEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~---~~~-----~Lp~~~~~~~----~~ 1131 (1208)
T PRK11905       1067 PTGESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA---ALA-----DLPGLVAARI----DW 1131 (1208)
T ss_pred             CCCcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH---HHH-----hCcccccccc----cc
Confidence            35778999999999999999999   557789999999999999999998652   111     1455444433    23


Q ss_pred             HHHHHhCC-CCeEEEeCChHHHHHHHHHHhccc
Q 038617          177 CEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHL  208 (484)
Q Consensus       177 ~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~  208 (484)
                      +..+..++ ++.|.|||++.+.+.+.++.+++-
T Consensus      1132 ~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~ 1164 (1208)
T PRK11905       1132 TQDWEADDPFAGALLEGDAERARAVRQALAARP 1164 (1208)
T ss_pred             ccccccCCcccEEEEeCCHHHHHHHHHHHHhCC
Confidence            34666665 999999999999999998877654


No 139
>PF00815 Histidinol_dh:  Histidinol dehydrogenase;  InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine. In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B.
Probab=97.31  E-value=0.18  Score=51.38  Aligned_cols=333  Identities=16%  Similarity=0.183  Sum_probs=147.3

Q ss_pred             CHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhh---hhHHHHH--------HHHHHHHHHHHHHHHhhcCccccC-
Q 038617           26 SVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVE---TYRDEIG--------LIKKSAKYALSCLDKWMAPKKRRL-   93 (484)
Q Consensus        26 ~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~e---a~~~ev~--------~~~~~~~~~~~~~~~~~~~~~~~~-   93 (484)
                      +.++..+..+.+.+-++++.|+-....++...+-..+   -...|+.        ...+.++.++.+++.+...+.... 
T Consensus        10 ~~~~v~~~V~~Il~dVr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~~~l~~~~~~Ai~~A~~~I~~fh~~q~~~~~   89 (412)
T PF00815_consen   10 DDSEVEETVREILEDVRERGDKALLEYTKKFDGVELESLRVSEEEIAAAYAKLDPELREAIEQAAENIRAFHEAQLPKKD   89 (412)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHHHHHHHHSSSS--SSSB--HHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHTT-----
T ss_pred             CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCccccEecHHHHHhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence            3344445555555555666555555555554321111   0111332        234456666777777766554211 


Q ss_pred             -cc-ccCCCcceEEeecceEEEEEccC-chh-HHHHHhHHHHHHhhCCEEEE--eCCccc-HHHHHHHHHHhccccCccc
Q 038617           94 -PL-LFFPASGEVVSEPFGVVLICSAW-NFP-INLALEPLIGAIAAGNTVML--KPSELA-VECASFLAETIPLYLDCKA  166 (484)
Q Consensus        94 -~~-~~~~~~~~~~~~P~GVv~~i~p~-n~P-~~~~~~~i~~ALaaGN~Vvl--kps~~~-~~t~~~l~~~l~~alp~g~  166 (484)
                       .. ...+.....++.|+--|++..|. .+| +++++..++||-.+|..=|+  -|.... ......|+.+ ..+   |+
T Consensus        90 ~~~~~~~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp~~~G~i~p~vL~Aa-~~~---Gv  165 (412)
T PF00815_consen   90 WEVETEPGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPPKDGKINPAVLAAA-HLA---GV  165 (412)
T ss_dssp             EEEEEETTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-SS------HHHHHHH-HHT---T-
T ss_pred             cEEEecCCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCCCccCCCCHHHHHHH-HHc---CC
Confidence             11 12344567788999999999993 344 24455567899999976544  344331 1112222211 111   11


Q ss_pred             eeecc-CChhHHHHHH---hC--CCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHH
Q 038617          167 IKVTN-GGVDVCEQLL---QQ--KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRII  240 (484)
Q Consensus       167 v~~v~-g~~~~~~~L~---~~--~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~  240 (484)
                      =.+.. |+.....+|.   +.  +||+|+=.|..-+..+=....+....- .+.+..---+|-|+   ++|.+..+.+++
T Consensus       166 ~evy~vGGaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g~V~ID-~~AGPSEv~ViAD~---~A~p~~vAaDLL  241 (412)
T PF00815_consen  166 DEVYKVGGAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFGDVGID-MIAGPSEVLVIADE---TANPEFVAADLL  241 (412)
T ss_dssp             SEEEE--HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHHS-EES-------EEEEEE-T---TS-HHHHHHHHH
T ss_pred             CEEEecccHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcCCcccC-CCCCCCceEEEECC---CCCHHHHHHHHH
Confidence            11221 3433333442   12  399999988876544322222211111 11112223455677   899999999998


Q ss_pred             HhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCCC
Q 038617          241 GGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGL  320 (484)
Q Consensus       241 ~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~  320 (484)
                      .-+=. ...     .+.++|..+  +++.+++.+++.+....-|          ..       +.++++           
T Consensus       242 aQAEH-d~~-----a~~vLvt~s--~~la~~V~~~v~~~l~~l~----------r~-------~i~~~s-----------  285 (412)
T PF00815_consen  242 AQAEH-DPD-----AQAVLVTTS--EELAEAVEAEVERQLEELP----------RR-------EIAEKS-----------  285 (412)
T ss_dssp             HHHTT--TT------EEEEEES---HHHHHHHHHHHHHHHTT-T----------TH-------HHHHHH-----------
T ss_pred             HHhcc-CCC-----CceEEEECC--HHHHHHHHHHHHHHHHhCC----------ch-------HHHHHH-----------
Confidence            88765 332     223455444  4555555444443210000          00       111111           


Q ss_pred             cCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccc-eeeEE
Q 038617          321 LDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTS-SGSLI  399 (484)
Q Consensus       321 ~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~-~g~v~  399 (484)
                                                 +. --.++.++|++||++++|..-- =-..|.++|+.   .+..+++ +|.|+
T Consensus       286 ---------------------------l~-~g~ii~~~~l~ea~~~~N~~AP-EHLel~~~~~~---~~~~~i~~AGaiF  333 (412)
T PF00815_consen  286 ---------------------------LE-NGAIIVVDSLEEAIELANEYAP-EHLELQVEDPE---ELLEKIRNAGAIF  333 (412)
T ss_dssp             ---------------------------HT-T-EEEE-SSHHHHHHHHHHH---SEEEEESTTHH---HHGGG--S-SEEE
T ss_pred             ---------------------------HH-CCeEEEECCHHHHHHHHHHhhH-HHHHHHHcCHH---HHHHHhhccChhh
Confidence                                       11 1134567999999999999422 25678888885   3555554 89999


Q ss_pred             ECCCccc-------cCCCCCCcccCCCCCCCCcchHHHHHHhhhccE
Q 038617          400 FNDTLVQ-------QLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKA  439 (484)
Q Consensus       400 iN~~~~~-------~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~  439 (484)
                      +...+.-       ..+..+|-+     |..++.|..+...|.+.-+
T Consensus       334 lG~~tp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s  375 (412)
T PF00815_consen  334 LGEYTPEALGDYAAGPNHVLPTG-----GTARFSSGLSVDDFLKRIS  375 (412)
T ss_dssp             ESTT--HHHHHHTSSS------T-----TGGGT---S-GGGGEEEEE
T ss_pred             cCCCCCHHHhhhccCCCccCCCC-----ccccccCCCcHHHccceee
Confidence            9975421       123344444     4567777788899995444


No 140
>PRK13770 histidinol dehydrogenase; Provisional
Probab=96.94  E-value=0.57  Score=47.69  Aligned_cols=329  Identities=13%  Similarity=0.107  Sum_probs=168.2

Q ss_pred             HHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhh---hhHHHHHH--------HHHHHHHHHHHHHHhhcCccccCccccC
Q 038617           30 RKNQLRALIELLQDNEDKIFKALHQDLGKHPVE---TYRDEIGL--------IKKSAKYALSCLDKWMAPKKRRLPLLFF   98 (484)
Q Consensus        30 R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~e---a~~~ev~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (484)
                      -.+..+++.+.++++.|+=....++...+-..+   .-..|+..        ..+.++.+.++++.+...+.........
T Consensus        21 ~~~~V~~Ii~~Vr~~GD~Al~~yt~~FD~~~~~~~~Vs~~ei~~A~~~v~~~~~~ai~~A~~nI~~fh~~q~~~~~~~~~  100 (416)
T PRK13770         21 LYPIIRDICQEVKVHGDKALKMYNLTFDHTKTDHLEISHEQIKAAFDTLDEKTKQALQQSYERIKAYQESIKQTNQQLEE  100 (416)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCcccceeCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCCeEecC
Confidence            334555566666666555544444444321101   00113322        2344555666666665544322222223


Q ss_pred             CCcceEEeecceEEEEEccC-chh-HHHHHhHHHHHHhhCCEEEEe--CCcccHHHHHHHHHHhccccCccceeec-cCC
Q 038617           99 PASGEVVSEPFGVVLICSAW-NFP-INLALEPLIGAIAAGNTVMLK--PSELAVECASFLAETIPLYLDCKAIKVT-NGG  173 (484)
Q Consensus        99 ~~~~~~~~~P~GVv~~i~p~-n~P-~~~~~~~i~~ALaaGN~Vvlk--ps~~~~~t~~~l~~~l~~alp~g~v~~v-~g~  173 (484)
                      +.....++.|+--|++..|. .+| +++.+...+||-.+|+.=|+-  |++........|+.+ +.+   |+=.+. -|+
T Consensus       101 gv~~g~~~~Pi~rvGlYVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~Aa-~~~---Gv~eIy~iGG  176 (416)
T PRK13770        101 SVECYEIYHPLESVGIYVPGGKASYPSTVLMTATLAQVAGVENIVVVTPPQPNGVSQEVLAAC-YIT---QVNQVFQVGG  176 (416)
T ss_pred             CcEEEEEEeeeeeeEEEccCCCCCccHHHHHhhccHhhcCCCeEEEEeCcCCCCCCHHHHHHH-HHc---CCCeeeccCC
Confidence            44556788999999999995 334 345555678999999875544  443211112222211 111   111111 134


Q ss_pred             hhHHHHHH---hC-C-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHhhcccCC
Q 038617          174 VDVCEQLL---QQ-K-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCN  248 (484)
Q Consensus       174 ~~~~~~L~---~~-~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~~~~~~~  248 (484)
                      .....+|.   +. + ||.|+=.|..-+..+=....+....- .+.+..--.+|-|+   +||.+..+.+++.-+=. ..
T Consensus       177 AQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~V~ID-~~AGPSEvlViAD~---~Anp~~iAaDLLaQAEH-d~  251 (416)
T PRK13770        177 AQSIAALTYGTETIPKVDKIVGPGNQFVAYAKKYLFGQVGID-QIAGPTEIALIIDE---TADLDAIVYDVFAQAEH-DE  251 (416)
T ss_pred             HHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcCCcCcC-CCCCCceeEEEecC---CCCHHHHHHHHHHHhcc-CC
Confidence            44444443   22 3 99999888765443211111111111 11112223455566   89999999999887754 22


Q ss_pred             CCccccCCceEEccc--hHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCCCcCCCCC
Q 038617          249 GQVCVGVDYILVEKK--FAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLDKENL  326 (484)
Q Consensus       249 Gq~C~a~~~v~V~~~--i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~  326 (484)
                      .     .+.++|..+  +.++..+.+.+.+..+.                 .    .+.++++.                
T Consensus       252 ~-----a~~iLvT~s~~la~~V~~ev~~ql~~lp-----------------r----~~i~~~al----------------  289 (416)
T PRK13770        252 L-----ARTYVISEDAQVLKDLESRIAKALPNVD-----------------R----YDIVSKSI----------------  289 (416)
T ss_pred             C-----CcEEEEeCCHHHHHHHHHHHHHHHHhCC-----------------h----HHHHHHHH----------------
Confidence            1     234455333  33444444444443321                 0    01111110                


Q ss_pred             eeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccc-eeeEEECCCcc
Q 038617          327 FIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTS-SGSLIFNDTLV  405 (484)
Q Consensus       327 ~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~-~g~v~iN~~~~  405 (484)
                                         +-+|   .++-++|+|||++++|..--= -.-|.++|...   +..+++ +|.|++...+.
T Consensus       290 -------------------~~~g---~ii~v~~~eeai~~~N~~APE-HLel~~~~~~~---~l~~i~nAGaiFlG~~sp  343 (416)
T PRK13770        290 -------------------ANQH---YLIHASNFDEACHVMNTIAPE-HASIQTVNPQP---YIEKVKYVGALFIGHYSP  343 (416)
T ss_pred             -------------------HhCC---EEEEECCHHHHHHHHHhhChH-hheehhCCHHH---HHhhCCEeceeccCCCCc
Confidence                               1112   234579999999999995322 34588888854   445554 79999986543


Q ss_pred             cc-------CCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 038617          406 QQ-------LCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI  440 (484)
Q Consensus       406 ~~-------~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v  440 (484)
                      -.       .+..+|-     +|..++.|..+...|.+.-++
T Consensus       344 ~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~  380 (416)
T PRK13770        344 EVIGDYVAGPSHVLPT-----NRTARFTNGLSVNDFLTRNTV  380 (416)
T ss_pred             hhhhccccCCCCcCCC-----CcceeccCCCcHHHeecceee
Confidence            21       1223333     355677777888999955443


No 141
>TIGR00069 hisD histidinol dehydrogenase. This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein.
Probab=96.75  E-value=0.67  Score=46.90  Aligned_cols=258  Identities=19%  Similarity=0.209  Sum_probs=139.8

Q ss_pred             CCCcceEEeecceEEEEEccCc-hh-HHHHHhHHHHHHhhCCEEEE--eCCcc-cHHHHHHHHHHhccccCccceeec-c
Q 038617           98 FPASGEVVSEPFGVVLICSAWN-FP-INLALEPLIGAIAAGNTVML--KPSEL-AVECASFLAETIPLYLDCKAIKVT-N  171 (484)
Q Consensus        98 ~~~~~~~~~~P~GVv~~i~p~n-~P-~~~~~~~i~~ALaaGN~Vvl--kps~~-~~~t~~~l~~~l~~alp~g~v~~v-~  171 (484)
                      .+.....++.|+.-|++..|.- +| +++.+...+||-.+|+.=|+  -|... .......|+.+ +.+   |+=.+. -
T Consensus        78 ~Gv~~g~~~~Pi~rvGlYVPGG~a~~pStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~AA-~~~---Gv~eIy~v  153 (393)
T TIGR00069        78 PGVILGQRVRPLERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPGKDGKINPAVLAAA-KLA---GVDEVYKV  153 (393)
T ss_pred             CCeEEEEEEEEeheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCcCCCCCHHHHHHH-HHc---CCCeehhc
Confidence            3445677889999999999973 23 34455567899999986554  34421 11222222221 111   111122 1


Q ss_pred             CChhHHHHHH---hC-C-CCeEEEeCChHHHHHHHHHHhcccCceeeec-CCc--CceEEcCCCCCCCHHHHHHHHHHhh
Q 038617          172 GGVDVCEQLL---QQ-K-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLEL-GGK--CPAILDTLSSPLDIKVTVKRIIGGK  243 (484)
Q Consensus       172 g~~~~~~~L~---~~-~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lel-gG~--~p~iV~~~~~daDl~~aa~~i~~~~  243 (484)
                      |+.....+|.   +. | ||.|+=.|..-+..+=....+    .+-..+ .|.  -.+|-|+   +||.+.++.+++.-+
T Consensus       154 GGAQAIAAlAyGTesIp~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~AGPSEvlViAD~---~Anp~~iAaDLLaQA  226 (393)
T TIGR00069       154 GGAQAIAALAYGTETVPKVDKIVGPGNIYVTAAKKLVFG----DVGIDMPAGPSEVLVIADE---TANPEFVAADLLSQA  226 (393)
T ss_pred             CCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcC----ccCcCCCCCCceEEEEeCC---CCCHHHHHHHHHHHh
Confidence            3444444443   22 4 999998887655432111111    111121 133  3355566   899999999998887


Q ss_pred             cccCCCCccccCCceEEccc--hHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCCCc
Q 038617          244 FASCNGQVCVGVDYILVEKK--FAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLL  321 (484)
Q Consensus       244 ~~~~~Gq~C~a~~~v~V~~~--i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~~  321 (484)
                      =. ...     .+.++|..+  +.++..+.+.+.+..+.                 .    .+..+++.           
T Consensus       227 EH-d~~-----a~~iLvT~s~~la~~V~~~v~~ql~~l~-----------------r----~~i~~~al-----------  268 (393)
T TIGR00069       227 EH-DPD-----AQAILVTTSEELAEAVQEEIERQLATLP-----------------R----REIARKSL-----------  268 (393)
T ss_pred             cc-CCC-----CcEEEEECCHHHHHHHHHHHHHHHHhCC-----------------h----HHHHHHHH-----------
Confidence            54 221     334555333  34444444444444321                 0    01111111           


Q ss_pred             CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcc-ceeeEEE
Q 038617          322 DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGT-SSGSLIF  400 (484)
Q Consensus       322 ~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l-~~g~v~i  400 (484)
                                              +-+|   .++.++|++||++++|..--= -.-|.++|...   +..++ .+|.|++
T Consensus       269 ------------------------~~~g---~ii~v~~l~ea~~~~N~~APE-HLel~~~~p~~---~l~~I~nAGaiFl  317 (393)
T TIGR00069       269 ------------------------EDNG---AIILVDDLEEAIEISNDYAPE-HLELQTKNPEE---LLPKIRNAGSIFL  317 (393)
T ss_pred             ------------------------HhCC---EEEEECCHHHHHHHHHhhChH-hheehhCCHHH---HHhhcCccceecc
Confidence                                    0012   234579999999999995222 34577888754   44444 4899999


Q ss_pred             CCCcccc-------CCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 038617          401 NDTLVQQ-------LCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI  440 (484)
Q Consensus       401 N~~~~~~-------~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v  440 (484)
                      ...+.-.       .+..+|-     +|..++.+..+...|.++-++
T Consensus       318 G~~tp~a~GDY~aG~NHvLPT-----~G~Ar~~sgL~v~~F~K~~s~  359 (393)
T TIGR00069       318 GPYTPEAAGDYAAGPNHVLPT-----GGTARFYSGLSVLDFLKRITV  359 (393)
T ss_pred             CCCCchhhhhccCCCCcccCC-----CcceeecCCccHHHhccceeE
Confidence            8754321       1222333     456677788889999955443


No 142
>PRK12447 histidinol dehydrogenase; Reviewed
Probab=96.75  E-value=0.83  Score=46.74  Aligned_cols=325  Identities=15%  Similarity=0.217  Sum_probs=167.9

Q ss_pred             HHHHHHHHHHHHHhcHHHHHHHHHHHcCCC----hhhhhHHHHHH--------HHHHHHHHHHHHHHhhcCccccC--cc
Q 038617           30 RKNQLRALIELLQDNEDKIFKALHQDLGKH----PVETYRDEIGL--------IKKSAKYALSCLDKWMAPKKRRL--PL   95 (484)
Q Consensus        30 R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~----~~ea~~~ev~~--------~~~~~~~~~~~~~~~~~~~~~~~--~~   95 (484)
                      -.+..+.+.+.++++.|+=....++...+-    +.-+ ..|+..        ..+.++.++++++.+...+....  ..
T Consensus        22 ~~~~V~~Il~~Vr~~GD~Al~~yt~~fD~~~~~~l~Vs-~~ei~~A~~~v~~~~~~ai~~A~~nI~~fh~~q~~~~~~~~  100 (426)
T PRK12447         22 VRETVEAILADIEARGDAAVREYSRKFDKWSPGSFRLS-AAEIDAAVAKVPEQVKEDIRFAQDQVRRFAEAQRDSLQDLE  100 (426)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCccccccC-HHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCceE
Confidence            344555555666666555444444443321    1111 113332        23445556666666655443211  11


Q ss_pred             --ccCCCcceEEeecceEEEEEccC-chh-HHHHHhHHHHHHhhCCEEEE--eCCcccHHHHHHHHHHhccccCccceee
Q 038617           96 --LFFPASGEVVSEPFGVVLICSAW-NFP-INLALEPLIGAIAAGNTVML--KPSELAVECASFLAETIPLYLDCKAIKV  169 (484)
Q Consensus        96 --~~~~~~~~~~~~P~GVv~~i~p~-n~P-~~~~~~~i~~ALaaGN~Vvl--kps~~~~~t~~~l~~~l~~alp~g~v~~  169 (484)
                        ...+.....++.|+--|++..|. .+| +++.+...+||-.+|+.=|+  -|+.........|+.+ +.+   |+=.+
T Consensus       101 ~~~~~Gv~~g~~~~Pl~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~Aa-~~~---Gv~eI  176 (426)
T PRK12447        101 VETLPGVILGHRNIPVNSVGCYVPGGRYPLVASAHMSVLTAKVAGVKRVIACTPPFPGEPPPAIVAAM-HLA---GADEI  176 (426)
T ss_pred             EecCCCeEEEEEEeehheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHHHHH-HHc---CCCee
Confidence              12344556788999999999995 334 34555577899999986554  3443211222222221 111   11112


Q ss_pred             c-cCChhHHHHHH---hC-C-CCeEEEeCChHHHHHHHHHHhcccCceeeec-CCc--CceEEcCCCCCCCHHHHHHHHH
Q 038617          170 T-NGGVDVCEQLL---QQ-K-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLEL-GGK--CPAILDTLSSPLDIKVTVKRII  240 (484)
Q Consensus       170 v-~g~~~~~~~L~---~~-~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lel-gG~--~p~iV~~~~~daDl~~aa~~i~  240 (484)
                      . -|+.....+|.   +. | ||.|+=.|..-+..+=....+    .+-..+ .|.  --+|-|+   +||.+..+.+++
T Consensus       177 y~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~AGPSEvlViAD~---~Anp~~vAaDLL  249 (426)
T PRK12447        177 YVLGGVQAVAAMAYGTETIKPVDMLVGPGNAYVAEAKRQLFG----RVGIDLFAGPTETLVIADD---TADPELVATDLL  249 (426)
T ss_pred             hhcCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcC----ccCcCCCCCCceeEEEeCC---CCCHHHHHHHHH
Confidence            2 13444444443   22 4 999998887765432111111    111111 133  3345566   899999999998


Q ss_pred             HhhcccCCCCccccCCceEEccc--hHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeC
Q 038617          241 GGKFASCNGQVCVGVDYILVEKK--FAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHG  318 (484)
Q Consensus       241 ~~~~~~~~Gq~C~a~~~v~V~~~--i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~g  318 (484)
                      .-+=. ...     .+.++|..+  +.++..+.+.+.+..+.                 .    .+.++++.        
T Consensus       250 aQAEH-d~~-----a~~iLvT~s~~la~~V~~~v~~ql~~l~-----------------r----~~i~~~sl--------  294 (426)
T PRK12447        250 GQAEH-GPN-----SPAVLITTSRKLAEEVLAEIERLLAILP-----------------T----ADVASAAW--------  294 (426)
T ss_pred             HHhcc-CCC-----CceEEEECCHHHHHHHHHHHHHHHHhCC-----------------H----HHHHHHHH--------
Confidence            87754 222     234555433  33444444444333221                 0    01111110        


Q ss_pred             CCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcc-ceee
Q 038617          319 GLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGT-SSGS  397 (484)
Q Consensus       319 g~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l-~~g~  397 (484)
                                                 +-+|   .|+-++|++||++++|..--= -.-|.++|...   +..++ .+|.
T Consensus       295 ---------------------------~~~g---~ii~v~~l~ea~~~~N~~APE-HLel~~~~~~~---~l~~i~nAGa  340 (426)
T PRK12447        295 ---------------------------RDYG---EVILCDDLEEMVAEADRYASE-HVQVMTEDPDW---FLENMTNYGA  340 (426)
T ss_pred             ---------------------------HhCC---EEEEECCHHHHHHHHHhhChH-heeehhCCHHH---HHhhcCccce
Confidence                                       0122   234579999999999995222 34588888853   44544 4899


Q ss_pred             EEECCCcccc-------CCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 038617          398 LIFNDTLVQQ-------LCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI  440 (484)
Q Consensus       398 v~iN~~~~~~-------~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v  440 (484)
                      |++...+.-.       .+..+|-     +|..++.|..+...|.+.-++
T Consensus       341 iFlG~~sp~a~GDY~aGpNHvLPT-----~G~Ar~~sgLsv~~FlK~~s~  385 (426)
T PRK12447        341 LFLGERTNVAYGDKVIGTNHVLPT-----SGAARYTGGLWVGKFLKTVTY  385 (426)
T ss_pred             eccCCCCchhhhhcccCCCcccCC-----CcceeecCCCcHHHhccceeE
Confidence            9997654311       1122333     456777788889999955443


No 143
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=95.86  E-value=0.048  Score=63.66  Aligned_cols=103  Identities=17%  Similarity=0.114  Sum_probs=74.8

Q ss_pred             cCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccccCccceeeccCChhH
Q 038617           97 FFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDV  176 (484)
Q Consensus        97 ~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~alp~g~v~~v~g~~~~  176 (484)
                      ..|+++..+..|+|+|+++++-.-   ..+..++.+|++||.||+..++.   ....+     ..+|+.+.+.+.-  ..
T Consensus      1176 PTGE~N~l~l~pRg~vLcl~~~~~---~~~~Ql~Aala~Gn~~v~~~~~~---~~~~~-----~~Lp~~v~~~v~~--~~ 1242 (1318)
T PRK11809       1176 PTGERNTYTLLPRERVLCLADTEQ---DALTQLAAVLAVGSQALWPDDAL---HRALV-----AALPAAVQARIQL--AK 1242 (1318)
T ss_pred             CCCCcceeeccCCCcEEEeCCCHH---HHHHHHHHHHHhCCEEEEeCCch---hHHHH-----HhccHHHHhHhhh--cc
Confidence            357789999999999999987433   57788999999999998875543   22222     3388888776522  11


Q ss_pred             HHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCcee
Q 038617          177 CEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVT  212 (484)
Q Consensus       177 ~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~  212 (484)
                      ...+...+++.|.|-|.....+.+.++.+++-.+++
T Consensus      1243 ~~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~GaIv 1278 (1318)
T PRK11809       1243 DWQLADQPFDAVLFHGDSDQLRALCEQVAQRDGPIV 1278 (1318)
T ss_pred             ccccccCCccEEEEeCCHHHHHHHHHHHhcCCCCeE
Confidence            222223458999999999999999988887765555


No 144
>cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E.C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway.
Probab=95.82  E-value=2.5  Score=42.91  Aligned_cols=261  Identities=18%  Similarity=0.162  Sum_probs=138.2

Q ss_pred             CCCcceEEeecceEEEEEccCc-hh-HHHHHhHHHHHHhhCCEEEE--eCCccc-HHHHHHHHHHhccccCccceeec-c
Q 038617           98 FPASGEVVSEPFGVVLICSAWN-FP-INLALEPLIGAIAAGNTVML--KPSELA-VECASFLAETIPLYLDCKAIKVT-N  171 (484)
Q Consensus        98 ~~~~~~~~~~P~GVv~~i~p~n-~P-~~~~~~~i~~ALaaGN~Vvl--kps~~~-~~t~~~l~~~l~~alp~g~v~~v-~  171 (484)
                      .+.....++.|+--|++..|.- +| +++.+...+||-.+|+.=|+  -|.... ......|+.+ +.+   |+=.+. -
T Consensus        82 ~G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~aa-~~~---Gv~eiy~v  157 (390)
T cd06572          82 PGVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPPRKDGKINPAILAAA-KLA---GVDEIYKV  157 (390)
T ss_pred             CCcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCcCCCCCCCHHHHHHH-HHc---CCcEEecc
Confidence            3556678899999999999965 44 34555567899999986544  344321 1111222211 111   111122 1


Q ss_pred             CChhHHHHHH---h-CC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHhhccc
Q 038617          172 GGVDVCEQLL---Q-QK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFAS  246 (484)
Q Consensus       172 g~~~~~~~L~---~-~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~~~~~  246 (484)
                      |+.....+|.   + -+ ||.|+=.|..-+..+=....... .-=.+.+..--.+|.|+   +||.+..+.+++.-+=. 
T Consensus       158 GGaQAIAAlAyGTesi~~VDkIvGPGN~yV~~AK~~v~g~V-~ID~~AGPSEvlIiAD~---~A~p~~vAaDLLaQAEH-  232 (390)
T cd06572         158 GGAQAIAALAYGTETIPKVDKIVGPGNIYVTAAKRLVSGDV-GIDMPAGPSEVLVIADE---TANPEFVAADLLSQAEH-  232 (390)
T ss_pred             CCHHHHHHHHcCCcCCCCCCEeeCCchHHHHHHHHHhcCCc-CccCCCCCceEEEEeCC---CCCHHHHHHHHHhhhcc-
Confidence            3444444443   1 24 99999888665443211111110 00111112223355566   89999999998887754 


Q ss_pred             CCCCccccCCceEEccc--hHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCCCcCCC
Q 038617          247 CNGQVCVGVDYILVEKK--FAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLDKE  324 (484)
Q Consensus       247 ~~Gq~C~a~~~v~V~~~--i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~  324 (484)
                      ..    . .+.++|..+  +.++..+.+.+.+..+.                 ..    +.++++.              
T Consensus       233 ~~----~-a~aiLvT~s~~la~~V~~~v~~ql~~l~-----------------r~----~~~~~~~--------------  272 (390)
T cd06572         233 DP----D-SQAILVTTSEELAEAVEEEVERQLAELP-----------------RR----EIAAKSL--------------  272 (390)
T ss_pred             CC----C-CeEEEEECCHHHHHHHHHHHHHHHHhCC-----------------cH----HHHHHHH--------------
Confidence            21    1 234555444  23344443433333221                 00    0111100              


Q ss_pred             CCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcc-ceeeEEECCC
Q 038617          325 NLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGT-SSGSLIFNDT  403 (484)
Q Consensus       325 g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l-~~g~v~iN~~  403 (484)
                                           +-+|   .++.++|++|+++++|..-- --.-|.++|...   +..++ .+|.|++..+
T Consensus       273 ---------------------~~~g---~ii~~~~~~eai~~~N~~AP-EHLel~~~~~~~---~l~~i~nAGsiFlG~~  324 (390)
T cd06572         273 ---------------------LDYG---AIILVDDLEEAIELANEYAP-EHLELQTEDPEE---LLEKIRNAGSIFLGPY  324 (390)
T ss_pred             ---------------------HhCC---EEEEECCHHHHHHHHHhhch-hhheeHhcCHHH---HHhhCccceEEeecCC
Confidence                                 0111   34457999999999998522 245678888864   44444 4899999875


Q ss_pred             cccc-------CCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 038617          404 LVQQ-------LCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAI  440 (484)
Q Consensus       404 ~~~~-------~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v  440 (484)
                      +.-.       .+..+|.+     |..++.|..+...|.++-++
T Consensus       325 tp~a~GDY~aGpNHvLPT~-----G~Ar~~sgL~v~~F~K~~s~  363 (390)
T cd06572         325 TPEALGDYAAGPNHVLPTG-----GTARFYSGLSVDDFLKRITV  363 (390)
T ss_pred             CchhhhccccCCCCccCCC-----cceeecCCCCHHHheeccee
Confidence            4321       12234444     45677777888999955443


No 145
>COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism]
Probab=95.30  E-value=3.9  Score=41.65  Aligned_cols=286  Identities=17%  Similarity=0.192  Sum_probs=152.6

Q ss_pred             HHHHHHHHHHHHhhcCccccC--ccccCCCcceEEeecceEEEEEcc---CchhHHHHHhHHHHHHhhCCEEEE--eCCc
Q 038617           73 KSAKYALSCLDKWMAPKKRRL--PLLFFPASGEVVSEPFGVVLICSA---WNFPINLALEPLIGAIAAGNTVML--KPSE  145 (484)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~P~GVv~~i~p---~n~P~~~~~~~i~~ALaaGN~Vvl--kps~  145 (484)
                      +.++.++++++.+...+....  .....+.....++.|+--|++..|   .-||-..+| ..+||-.+|+.=|+  -|.+
T Consensus        79 eai~~A~~~I~~fH~~Q~p~~~~~~~~~Gv~~g~~~~Pi~~VGlYVPGG~A~ypStvLM-~avPAkvAGv~~Iv~~tPp~  157 (425)
T COG0141          79 EALEVAAENIEAFHEAQLPKDWLVETEPGVVLGQRWRPIERVGLYVPGGKAAYPSTVLM-NAVPAKVAGVEEIVVVTPPP  157 (425)
T ss_pred             HHHHHHHHHHHHHHHhhCCCccceeccCCcEEEEEEEEhhheEEEccCCCcCChHHHHH-hhccHhhcCCceEEEECCCC
Confidence            455566677777766554321  112234566788999999999999   556655555 56799999986443  3544


Q ss_pred             c---cHHHHHHHHHHhccccCccceeeccCChhHHHHHHh---C--CCCeEEEeCChHHHHHHHHHHhcccCceeeecCC
Q 038617          146 L---AVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQ---Q--KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGG  217 (484)
Q Consensus       146 ~---~~~t~~~l~~~l~~alp~g~v~~v~g~~~~~~~L~~---~--~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG  217 (484)
                      .   +|.+ ..-++++-  +. .+++  -|+.....+|.=   .  +||+|+=.|+.-+..+=....  ...-+=+..|-
T Consensus       158 ~~gv~p~i-L~AA~~~G--v~-eIy~--vGGAQAIAAlAYGTetV~~VdkIvGPGN~yVtaAKr~v~--g~V~ID~~AGP  229 (425)
T COG0141         158 KDGVNPEI-LAAARLAG--VD-EVYK--VGGAQAIAALAYGTETVPKVDKIVGPGNAYVTAAKRLVS--GVVGIDMIAGP  229 (425)
T ss_pred             CCCCCHHH-HHHHHHhC--cH-HHHH--ccCHHHHHHHHccCCcCCccCeeeCCCcHHHHHHHHHhh--CCcccCCCCCC
Confidence            3   2321 11111110  11 1111  134444444431   1  499999888775433211111  11111122222


Q ss_pred             c-CceEEcCCCCCCCHHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCH
Q 038617          218 K-CPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINE  296 (484)
Q Consensus       218 ~-~p~iV~~~~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~  296 (484)
                      - --+|-|+   ++|.+..+.+++.-+=. +.    . .+.++|..+  ++|.+++.+++.+..-.              
T Consensus       230 SEvlViAD~---ta~p~~vA~DLLsQAEH-d~----~-a~aiLvT~s--~~la~~v~~~v~~~l~~--------------  284 (425)
T COG0141         230 SEVLVIADE---TANPDFVAADLLSQAEH-DP----D-AQAILVTDS--EELAEAVEAAVERQLET--------------  284 (425)
T ss_pred             ceEEEEeCC---CCCHHHHHHHHHHHhhc-CC----C-ceEEEEeCc--HHHHHHHHHHHHHHHHh--------------
Confidence            2 2344455   79999999998887754 22    2 234555444  45555555544431100              


Q ss_pred             HHHHHHHHHhhchhcCCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceE
Q 038617          297 YHFERLRKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAI  376 (484)
Q Consensus       297 ~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a  376 (484)
                        ..+ .+.+.++.                                   +-||   .|+-++|++|+++++|..-- --.
T Consensus       285 --l~~-~ei~~~~l-----------------------------------~~~g---~iilv~~l~ea~~~~N~~AP-EHL  322 (425)
T COG0141         285 --LPR-AEIARKAL-----------------------------------ENYG---AIILVDDLDEAVEISNEYAP-EHL  322 (425)
T ss_pred             --ccH-HHHHHHHH-----------------------------------HhCC---eEEEECCHHHHHHHHHhhCh-Hhh
Confidence              000 11111110                                   0111   34567999999999998522 345


Q ss_pred             EEecCCHHHHHHHhhcc-ceeeEEECCCccccCCCCCCcccC----CCCCCCCcchHHHHHHhhhccE
Q 038617          377 YAFTKDETFKKQIVSGT-SSGSLIFNDTLVQQLCDVLPFGGV----GQSGIGRYHGHYSFETFSHEKA  439 (484)
Q Consensus       377 ~v~t~d~~~~~~~~~~l-~~g~v~iN~~~~~~~~~~~pfGG~----~~SG~G~~~g~~~~~~f~~~k~  439 (484)
                      -|.++|+..   +..++ ++|.|+++..+.-...++  ..|.    ..+|+-+..+..+...|..+-+
T Consensus       323 ei~~~~p~~---~l~~I~nAGsIFlG~~sPe~~GDY--~aG~NHVLPT~g~AR~~s~L~v~dF~K~~t  385 (425)
T COG0141         323 ELQTENPRE---LLGKIRNAGSIFLGHYSPESLGDY--AAGPNHVLPTSGTARFSSGLSVYDFLKRST  385 (425)
T ss_pred             hhhhcCHHH---HHHHhcccceeeecCCCCcccccc--ccCCCccCCCCccchhcCCccHHHhhhHHH
Confidence            688888864   44444 479999998543111111  1222    1245566777788888885443


No 146
>PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed
Probab=94.73  E-value=5.9  Score=40.73  Aligned_cols=334  Identities=17%  Similarity=0.166  Sum_probs=170.9

Q ss_pred             HHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhh---hhHHHHHH--------HHHHHHHHHHHHHHhhcCccccCcc
Q 038617           27 VAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVE---TYRDEIGL--------IKKSAKYALSCLDKWMAPKKRRLPL   95 (484)
Q Consensus        27 ~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~e---a~~~ev~~--------~~~~~~~~~~~~~~~~~~~~~~~~~   95 (484)
                      ..+-.+..+.+.+.++++.|+=....++..-+...+   ....|+..        ..+.++.++++++.+...+......
T Consensus        26 ~~~~~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~Vs~~ei~~A~~~v~~~~~~ai~~A~~~I~~Fh~~q~~~~~~  105 (425)
T PRK00877         26 DEDVEAAVREILEDVRERGDAALLEYTEKFDGVELESLRVSEEEIEAAYERLDPELREALEEAAENIRAFHEAQKPESWD  105 (425)
T ss_pred             hHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCcccceeCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhCCCCeE
Confidence            344455566666666666665555455544332100   00123332        2344556666666665544332111


Q ss_pred             --ccCCCcceEEeecceEEEEEccCc---hhHHHHHhHHHHHHhhCCEEEE--eCCcccHHHHHHHHHHhccccCcccee
Q 038617           96 --LFFPASGEVVSEPFGVVLICSAWN---FPINLALEPLIGAIAAGNTVML--KPSELAVECASFLAETIPLYLDCKAIK  168 (484)
Q Consensus        96 --~~~~~~~~~~~~P~GVv~~i~p~n---~P~~~~~~~i~~ALaaGN~Vvl--kps~~~~~t~~~l~~~l~~alp~g~v~  168 (484)
                        ...+.....++.|+--|++..|.-   || ++.+...+||-.+|..=|+  -|..........|+.+ +.+   |+=.
T Consensus       106 ~~~~~Gv~~g~~~~Pi~~vG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPp~~g~i~p~vL~AA-~~~---Gv~e  180 (425)
T PRK00877        106 VETAPGVRLGQRWRPIERVGLYVPGGKAAYP-SSVLMNAIPAKVAGVKEIVMVTPPPDGEINPAILAAA-ALA---GVDE  180 (425)
T ss_pred             EEecCCeEEEEEEEehHHeEEEccCCCCCch-HHHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHHHHH-HHc---CCCe
Confidence              123445567889999999999963   44 4455567899999986544  3443111222222211 111   1111


Q ss_pred             ec-cCChhHHHHHH---hC--CCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHh
Q 038617          169 VT-NGGVDVCEQLL---QQ--KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGG  242 (484)
Q Consensus       169 ~v-~g~~~~~~~L~---~~--~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~  242 (484)
                      +. -|+.....+|.   +.  +||.|+=.|..-+..+=....+.... =.+.+..---+|-|+   +||.+..+.+++.-
T Consensus       181 Iy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~V~I-D~~AGPSEvlViAD~---~Anp~~vAaDLLaQ  256 (425)
T PRK00877        181 VYKVGGAQAIAALAYGTESIPKVDKIVGPGNIYVTAAKRLVFGVVGI-DMIAGPSEILVIADE---TADPDFVAADLLSQ  256 (425)
T ss_pred             eeccCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHHcCCcCc-CCCCCCceeEEEeCC---CCCHHHHHHHHHHH
Confidence            11 13444444443   22  39999988876543321111111011 111111222344456   79999999999888


Q ss_pred             hcccCCCCccccCCceEEccc--hHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCCC
Q 038617          243 KFASCNGQVCVGVDYILVEKK--FAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGL  320 (484)
Q Consensus       243 ~~~~~~Gq~C~a~~~v~V~~~--i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~  320 (484)
                      +=. ...     .+.++|..+  +.++..+.+.+++..+.                    | .+.++++.          
T Consensus       257 AEH-d~~-----a~aiLvT~s~~la~~V~~~v~~ql~~l~--------------------r-~~ia~~sl----------  299 (425)
T PRK00877        257 AEH-DPD-----AQSILVTTSEELAEAVAAEVERQLATLP--------------------R-AEIARASL----------  299 (425)
T ss_pred             hcc-CCC-----CcEEEEECCHHHHHHHHHHHHHHHHhCC--------------------h-HHHHHHHH----------
Confidence            754 222     234555444  33444444433333221                    0 01111110          


Q ss_pred             cCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcc-ceeeEE
Q 038617          321 LDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGT-SSGSLI  399 (484)
Q Consensus       321 ~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l-~~g~v~  399 (484)
                                               +-+|   .|+.++|+|||++++|..-- --.-|.++|+..   +..++ .+|.|+
T Consensus       300 -------------------------~~~g---~iivv~~leeai~~~N~~AP-EHLel~~~~p~~---~l~~I~nAGaiF  347 (425)
T PRK00877        300 -------------------------EGQG---AIILVDDLEEAIELSNAYAP-EHLEIQTEDPRA---LLDRIRNAGAIF  347 (425)
T ss_pred             -------------------------HhCC---EEEEECCHHHHHHHHHhhCh-HheeehhCCHHH---HHhhcCccceec
Confidence                                     0122   23457999999999999522 234588888854   34444 589999


Q ss_pred             ECCCccccCCCCCCcccC----CCCCCCCcchHHHHHHhhhccEE
Q 038617          400 FNDTLVQQLCDVLPFGGV----GQSGIGRYHGHYSFETFSHEKAI  440 (484)
Q Consensus       400 iN~~~~~~~~~~~pfGG~----~~SG~G~~~g~~~~~~f~~~k~v  440 (484)
                      +...+.-...++  +.|.    ..+|..++.|..+...|.++-++
T Consensus       348 lG~~tp~a~GDY--~aGpNHvLPT~G~AR~~sgLsV~~F~K~~s~  390 (425)
T PRK00877        348 LGPYTPESLGDY--AAGPNHVLPTSGTARFSSGLSVYDFLKRSSV  390 (425)
T ss_pred             cCCCCchhhhhc--ccCCCcccCCCcceeecCCccHHHhccceeE
Confidence            987543211111  1222    23456778888889999955443


No 147
>PRK13769 histidinol dehydrogenase; Provisional
Probab=94.68  E-value=5.4  Score=40.13  Aligned_cols=247  Identities=14%  Similarity=0.109  Sum_probs=132.3

Q ss_pred             CCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccccCccceeec-cCChhH
Q 038617           98 FPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVT-NGGVDV  176 (484)
Q Consensus        98 ~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~alp~g~v~~v-~g~~~~  176 (484)
                      .+.....++.|+-.|++..|.-|| ++.+...+||-.+|+.=|+--+|-.......|+.+ +.+   |+=.+. -|+...
T Consensus        83 ~Gv~~g~~~~Pi~rvG~YVPa~~p-StvLM~~iPAkvAGV~~Iv~~TPp~~i~p~vL~aa-~~~---Gv~eIy~vGGAQA  157 (368)
T PRK13769         83 GGVLRSVFWKPVRRAALYVPARYV-STLVMLAVPARAAGVEEIYVVTPPRGVTGELLAVA-KEL---GVKGVLAIGGPHG  157 (368)
T ss_pred             CCeEEEEEEeeeeeeEEEeccchH-HHHHHhhccHhhcCCCeEEEeCCCCCCCHHHHHHH-HHc---CCCeeecccCHHH
Confidence            344566788999999999996555 55555788999999875544332111222222211 111   111111 134333


Q ss_pred             HHHHHhC-CCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHhhcccCCCCccccC
Q 038617          177 CEQLLQQ-KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGV  255 (484)
Q Consensus       177 ~~~L~~~-~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~~~~~~~Gq~C~a~  255 (484)
                      ..++.-. +||+|+=.|..-+..+=....+.  .-+=+--|----+||-+   ++|.+.++.+++.-+=. ..    . .
T Consensus       158 IAa~a~gt~VDkIvGPGN~yV~~AK~~v~g~--V~ID~~AGPSEvlViAD---~a~p~~vAaDLLaQAEH-~~----~-a  226 (368)
T PRK13769        158 LAYAVFHMGVDMVAGPGGLYVQAAKYVLSQY--VGIDGIEGPTELVVYAE---GVPPEVAVRGALAQLEH-GP----T-S  226 (368)
T ss_pred             HHHHhcCCCcCEEECCCcHHHHHHHHHHhCC--cCCCCcCCCcceEEEcC---CCCHHHHHHHHHHHhhc-CC----C-C
Confidence            3344322 69999988876554321111111  11111123334456666   78888888888777643 21    1 3


Q ss_pred             CceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCCCcCCCCCeeeeEEEeC
Q 038617          256 DYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLLDKENLFIEPTILLD  335 (484)
Q Consensus       256 ~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptil~~  335 (484)
                      +.++|..+  +++.+++.+++.+                          ++.+.       .       |.         
T Consensus       227 ~~iLvT~s--~~la~~V~~~v~~--------------------------~~~~~-------~-------~~---------  255 (368)
T PRK13769        227 FAYLLSTD--AELLKAAEEIYRR--------------------------ERTSS-------M-------GP---------  255 (368)
T ss_pred             cEEEEECC--HHHHHHHHHHHHH--------------------------HHHhc-------C-------CC---------
Confidence            34555555  4555555554432                          01000       0       00         


Q ss_pred             CCCCCcccccceecceeeeeeeCCHHHHHHHHhcC-CCCceEEEecCCHHHHHHHhhcc-ceeeEEECCCccc-----cC
Q 038617          336 PPLDAEIMTEEIFGPILPIITLNNIQESIEFINSR-PKPLAIYAFTKDETFKKQIVSGT-SSGSLIFNDTLVQ-----QL  408 (484)
Q Consensus       336 ~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~-~~gl~a~v~t~d~~~~~~~~~~l-~~g~v~iN~~~~~-----~~  408 (484)
                                      ..|+.++|++||++++|.. +-.|..  .+. ..    +..++ .+|.|+++.+...     ..
T Consensus       256 ----------------~~iivv~~leeai~~~N~~APEHLel--~~~-~~----~~~~i~nAGsiFl~~p~a~GDY~aGp  312 (368)
T PRK13769        256 ----------------LEVRKVAGVEEAVRFIDEIAPEHLEV--WGR-RE----VAYRVRNVGAVSVNMPSPYLDYVAGI  312 (368)
T ss_pred             ----------------CeEEEECCHHHHHHHHHhhChHheEe--eCc-HH----HHhhCCccCChhcCCchhhhccccCC
Confidence                            2456789999999999994 223433  332 22    33344 4899999653211     01


Q ss_pred             CCCCCcccCCCCCCCCcchHHHHHHhhhccE
Q 038617          409 CDVLPFGGVGQSGIGRYHGHYSFETFSHEKA  439 (484)
Q Consensus       409 ~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~  439 (484)
                      +..+|-     +|..++.|..+...|.++-+
T Consensus       313 NHvLPT-----~G~AR~~sgLsv~~FlK~~t  338 (368)
T PRK13769        313 SHVLPT-----GGTARWRGIITPLTFMKPIG  338 (368)
T ss_pred             CCcCCC-----CcceeccCCCcHHHccccee
Confidence            222333     35667777788899985443


No 148
>PLN02926 histidinol dehydrogenase
Probab=92.77  E-value=13  Score=38.24  Aligned_cols=286  Identities=17%  Similarity=0.194  Sum_probs=148.8

Q ss_pred             HHHHHHHHHHHHhhcCccccCc--c-ccCCCcceEEeecceEEEEEccCc-hh-HHHHHhHHHHHHhhCCEEEE--eCCc
Q 038617           73 KSAKYALSCLDKWMAPKKRRLP--L-LFFPASGEVVSEPFGVVLICSAWN-FP-INLALEPLIGAIAAGNTVML--KPSE  145 (484)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~P~GVv~~i~p~n-~P-~~~~~~~i~~ALaaGN~Vvl--kps~  145 (484)
                      +.++.+.++++.+...+.....  . ...+.....++.|+.-|++..|.- +| +++++..++||-.+|..=|+  -|+.
T Consensus        82 ~ai~~A~~nI~~fh~~q~~~~~~~~~~~~Gv~~g~~~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~  161 (431)
T PLN02926         82 EAFDVAYDNIYAFHLAQKSTEKLEVETMPGVRCRRVARPIGAVGLYVPGGTAVLPSTALMLAVPAQIAGCKTVVLATPPR  161 (431)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCcceEecCCCeEEEEEEechHHeeEeccCCCCCccHHHHHhhcchhhcCCCeEEEEECCC
Confidence            3445555666665554432211  1 123445567889999999999973 23 34455567899999986443  4543


Q ss_pred             c-cHHHHHHHHHHhccccCccceeec-cCChhHHHHHH---hC-C-CCeEEEeCChHHHHHHHHHHhcccCceeeec-CC
Q 038617          146 L-AVECASFLAETIPLYLDCKAIKVT-NGGVDVCEQLL---QQ-K-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLEL-GG  217 (484)
Q Consensus       146 ~-~~~t~~~l~~~l~~alp~g~v~~v-~g~~~~~~~L~---~~-~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lel-gG  217 (484)
                      . .......|+.+ +.+   |+=.+. -|+.....+|.   +. | ||.|+=.|..-+..+=....+. ..-+-..+ .|
T Consensus       162 ~~g~i~p~iL~AA-~~~---Gv~eIy~vGGaQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~G~-~~~VgID~~AG  236 (431)
T PLN02926        162 KDGSICPEVLYCA-KKA---GVTHILKAGGAQAIAAMAWGTDSCPKVDKIFGPGNQYVTAAKMILQNS-EAMVSIDMPAG  236 (431)
T ss_pred             cCCCCCHHHHHHH-HHc---CCCeeeccCCHHHHHHHHcCCCCCCCCCEEECCCcHHHHHHHHHhhCC-CCccccCCCCC
Confidence            2 11222222221 111   111121 13444444443   22 4 9999988877554321111111 00011111 13


Q ss_pred             c--CceEEcCCCCCCCHHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccC
Q 038617          218 K--CPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIIN  295 (484)
Q Consensus       218 ~--~p~iV~~~~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~  295 (484)
                      .  --+|-|+   +||.+.++.+++.-+=. ...     .+.++|..+  .++.+++.+++.+..-.-|           
T Consensus       237 PSEvlIiAD~---tA~p~~vAaDLLaQAEH-dp~-----a~aiLvT~s--~~la~~V~~~v~~ql~~l~-----------  294 (431)
T PLN02926        237 PSEVLVIADK---TANPVHVAADLLSQAEH-GPD-----SQVVLVAVG--DVDLDAIEEEVEKQCQSLP-----------  294 (431)
T ss_pred             CceeEEEeCC---CCCHHHHHHHHHHHhcc-CCC-----CcEEEEECC--HHHHHHHHHHHHHHHHhCC-----------
Confidence            3  3345566   79999999999887754 222     334555444  3444444443332100000           


Q ss_pred             HHHHHHHHHHhhchhcCCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCce
Q 038617          296 EYHFERLRKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLA  375 (484)
Q Consensus       296 ~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~  375 (484)
                           | .+..+                                      +.+.. -.|+.++|++||++++|..-- --
T Consensus       295 -----r-~~i~~--------------------------------------~sl~~-g~iivv~~l~ea~~~~N~~AP-EH  328 (431)
T PLN02926        295 -----R-GEIAS--------------------------------------KALGH-SFIVVARDMAEAISFSNLYAP-EH  328 (431)
T ss_pred             -----h-HHHHH--------------------------------------HHHHC-CEEEEECCHHHHHHHHHhhCh-Hh
Confidence                 0 01111                                      11111 234568999999999999522 23


Q ss_pred             EEEecCCHHHHHHHhhcc-ceeeEEECCCcccc-------CCCCCCcccCCCCCCCCcchHHHHHHhhhccE
Q 038617          376 IYAFTKDETFKKQIVSGT-SSGSLIFNDTLVQQ-------LCDVLPFGGVGQSGIGRYHGHYSFETFSHEKA  439 (484)
Q Consensus       376 a~v~t~d~~~~~~~~~~l-~~g~v~iN~~~~~~-------~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~  439 (484)
                      .-|.++|...   +..++ .+|.|++...+.-.       .+..+|-     +|..++.|..+...|.++-+
T Consensus       329 Lei~~~~~~~---~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s  392 (431)
T PLN02926        329 LIVNVEDAES---WLDKIDNAGSVFLGRWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMT  392 (431)
T ss_pred             heehhcCHHH---HHhhcCccceeccCCCCchhhhccccCcCcccCC-----CcceeecCCCcHHHhcceee
Confidence            4588888854   44444 48999997654211       1122333     35667788888999995444


No 149
>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]
Probab=74.24  E-value=17  Score=38.32  Aligned_cols=105  Identities=16%  Similarity=0.128  Sum_probs=69.7

Q ss_pred             CCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccccCccceeeccCChhHH
Q 038617           98 FPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVC  177 (484)
Q Consensus        98 ~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~alp~g~v~~v~g~~~~~  177 (484)
                      .++.+.....|.|-|+++.+   +....+..++.++++||.+++-+.+.-...        ...+|..+-..+.-..   
T Consensus       633 tGErN~~~l~pr~rvl~~~~---~~~~~~~ql~a~la~G~~~v~~~~~~~aa~--------~~~l~~~v~~~~~~~~---  698 (769)
T COG4230         633 TGERNTYTLHPRGRVLCVAG---DEQDLLTQLAAVLAVGNQVVIPEDSGLAAL--------LKDLPSAVASRIQVAK---  698 (769)
T ss_pred             cccceeecccCCccEEEeCC---CHHHHHHHHHHHHhcCCeEEecCcchHHHH--------HHhchhhhhhheeecc---
Confidence            45678888999999999854   467778888999999999998765422111        1224444311111111   


Q ss_pred             HHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecC
Q 038617          178 EQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELG  216 (484)
Q Consensus       178 ~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelg  216 (484)
                      ......++|.+.|.|-++..+.+.+..+....|++.-.+
T Consensus       699 ~~~~~~~~~~vl~~gd~~~~r~~~~~iA~~~Gpiv~~~~  737 (769)
T COG4230         699 DWTADIPFDAVLFHGDSDRLRALCEAIAARDGPIVSVQG  737 (769)
T ss_pred             chhhccceeeEEecCCHHHHHHHHHHHhcCCCCeEEeec
Confidence            111123589999999999889888877766667665554


No 150
>TIGR01319 glmL_fam conserved hypothetical protein. This small family includes, so far, an uncharacterized protein from E. coli O157:H7 and GlmL from Clostridium tetanomorphum and Clostridium cochlearium. GlmL is located between the genes for the two subunits, epsilon (GlmE) and sigma (GlmS), of the coenzyme-B12-dependent glutamate mutase (methylaspartate mutase), the first enzyme in a pathway of glutamate fermentation. Members shows significant sequence similarity to the hydantoinase branch of the hydantoinase/oxoprolinase family (pfam01968).
Probab=47.53  E-value=42  Score=35.01  Aligned_cols=135  Identities=17%  Similarity=0.141  Sum_probs=72.8

Q ss_pred             ccceeeccC--ChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHH
Q 038617          164 CKAIKVTNG--GVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIG  241 (484)
Q Consensus       164 ~g~v~~v~g--~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~  241 (484)
                      ..+++++.+  .....+.+...+.|.|.++|++..|..-.-   -+....+.++.-+.|+|+--   ..+...-++.|  
T Consensus        98 A~V~~~~a~~l~~~~l~~I~~~~PDIILLaGGtDGG~~e~~---l~NA~~La~~~~~~pIIyAG---N~~a~~~V~~i--  169 (463)
T TIGR01319        98 AKIANVYAYDLNNKDIEAIEESNLDIILFAGGTDGGEEECG---IHNAKMLAEHGLDCAIIVAG---NKDIQDEVQEI--  169 (463)
T ss_pred             cEEEEEEeecCCHHHHHHHhhcCCCEEEEeCCcCCCchHHH---HHHHHHHHhcCCCCcEEEeC---CHHHHHHHHHH--
Confidence            345666665  345567777767899999999998764321   11122344667778888777   55555555544  


Q ss_pred             hhcccCCCCccccCCceEE------ccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhch
Q 038617          242 GKFASCNGQVCVGVDYILV------EKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDP  309 (484)
Q Consensus       242 ~~~~~~~Gq~C~a~~~v~V------~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a  309 (484)
                        |. +++..|.-.++|+=      .+...+...+.+.+++-+.++-+. .+-+..-.+.++.++-+..+++.+.
T Consensus       170 --l~-~~~~~~~i~eNV~P~i~~ln~epaR~~I~~vF~~~Iv~akGl~~i~~~~~~~i~PTP~AV~~a~~~la~~  241 (463)
T TIGR01319       170 --FD-HADIFYRITDNVLPDLDHLNPEAAREAICDIFLKKIVEAKGLDNAEDFIGEELMPTPAAVFEAAKAIAEG  241 (463)
T ss_pred             --Hh-cCCceEEecCCcCCCCCCcCchHHHHHHHHHHHHHHhcCCCHHHHHHHhCCcccCCHHHHHHHHHHHHhc
Confidence              44 55666666665542      111122222222222221111111 0112223456788888888888774


No 151
>PF01513 NAD_kinase:  ATP-NAD kinase;  InterPro: IPR002504 Members of this family are ATP-NAD kinases 2.7.1.23 from EC. The enzymes catalyse the phosphorylation of NAD to NADP utilizing ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus.; GO: 0003951 NAD+ kinase activity, 0008152 metabolic process; PDB: 1U0T_B 1U0R_D 1Y3H_A 1Y3I_A 3AFO_B 1YT5_B 2AN1_A 2I2A_A 3V8P_A 2I1W_A ....
Probab=46.17  E-value=41  Score=32.86  Aligned_cols=63  Identities=16%  Similarity=0.141  Sum_probs=44.9

Q ss_pred             HHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCc-CceEEcCCCCCCCHHHHHHHHHHhhcc
Q 038617          180 LLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGK-CPAILDTLSSPLDIKVTVKRIIGGKFA  245 (484)
Q Consensus       180 L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~-~p~iV~~~~~daDl~~aa~~i~~~~~~  245 (484)
                      +....+|.|+.-|+..|-..+++......+|++.--.|. +.+-...   ..|++.+++.++.+.+.
T Consensus        72 ~~~~~~D~ii~lGGDGT~L~~~~~~~~~~~Pilgin~G~lgfl~~~~---~~~~~~~l~~~~~g~~~  135 (285)
T PF01513_consen   72 MLEEGVDLIIVLGGDGTFLRAARLFGDYDIPILGINTGTLGFLTEFE---PEDIEEALEKILAGEYS  135 (285)
T ss_dssp             HHCCCSSEEEEEESHHHHHHHHHHCTTST-EEEEEESSSSTSSSSEE---GCGHHHHHHHHHHTHCE
T ss_pred             hcccCCCEEEEECCCHHHHHHHHHhccCCCcEEeecCCCccccccCC---HHHHHHHHHHHhcCCeE
Confidence            334459999999999999999998876667877444444 3322223   56899999999887664


No 152
>PF13941 MutL:  MutL protein
Probab=42.37  E-value=58  Score=34.10  Aligned_cols=131  Identities=15%  Similarity=0.139  Sum_probs=65.3

Q ss_pred             ceeeccC--ChhHHHHHHhCCCCeEEEeCChHHHHH--HHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHH
Q 038617          166 AIKVTNG--GVDVCEQLLQQKWNKIFFTGSPRVGSI--VMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIG  241 (484)
Q Consensus       166 ~v~~v~g--~~~~~~~L~~~~vd~v~ftGs~~~g~~--i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~  241 (484)
                      +++++.+  ..+..+.|.+.+.|.|.++|++.-|..  +...+     ..+.+.+-+.|+|+--   ..+....++.|  
T Consensus       104 V~~v~s~~l~~~~l~~i~~~~PDiILLaGGtDgG~~~~il~nA-----~~La~~~~~~pVIyAG---N~~a~~~v~~i--  173 (457)
T PF13941_consen  104 VLQVYSYELTEEDLEEIREIRPDIILLAGGTDGGNKEVILHNA-----EMLAEANLRIPVIYAG---NKAAQDEVEEI--  173 (457)
T ss_pred             EEEEeccCCCHHHHHHHhccCCCEEEEeCCccCCchHHHHHHH-----HHHHhCCCCCcEEEEC---CHHHHHHHHHH--
Confidence            4455544  344556666666788888888886543  22222     1222334456777766   54444444444  


Q ss_pred             hhcccCCCCccccCCceEE------ccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhch
Q 038617          242 GKFASCNGQVCVGVDYILV------EKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDP  309 (484)
Q Consensus       242 ~~~~~~~Gq~C~a~~~v~V------~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a  309 (484)
                        |. .+|..|.-.++|+=      .+...+...+.+.+++-+.++-+. .+-...-.+.++.+.-+..+++.+.
T Consensus       174 --l~-~~~~~~~~~~NV~P~i~~ln~~paR~~I~~~F~~~Ii~akGl~~~~~~~~~~i~PTP~AVl~~~~lla~~  245 (457)
T PF13941_consen  174 --LE-KAGKEVVITENVMPKIDVLNVEPAREAIREVFLRHIIQAKGLSKLREMVDGPIMPTPAAVLRAAELLAEG  245 (457)
T ss_pred             --HH-hCCCCEEEeCCCCCCCCCcChHHHHHHHHHHHHHHHhcCCCHHHHHHHhCCcccCCHHHHHHHHHHHHhc
Confidence              43 46667766666531      111112222222222221111111 0011122455788888888888774


No 153
>PF03295 Pox_TAA1:  Poxvirus trans-activator protein A1 C-terminal;  InterPro: IPR004975 Late transcription factor VLTF-2, acts with RNA polymerase to initiate transcription from late gene promoters [].
Probab=41.94  E-value=47  Score=24.01  Aligned_cols=28  Identities=29%  Similarity=0.411  Sum_probs=23.5

Q ss_pred             cccceecceeeeeeeCCHHHHHHHHhcC
Q 038617          343 MTEEIFGPILPIITLNNIQESIEFINSR  370 (484)
Q Consensus       343 ~~eE~fgPvl~v~~~~~~~eai~~~n~~  370 (484)
                      .+||.=--.++++-|++.+++++++|..
T Consensus         9 LREEPKisLLPLv~Y~~Pe~Vi~iIN~l   36 (63)
T PF03295_consen    9 LREEPKISLLPLVFYEDPEEVINIINEL   36 (63)
T ss_pred             eccCCcceEEeeeeccCHHHHHHHHHHh
Confidence            4566666688999999999999999984


No 154
>PF06945 DUF1289:  Protein of unknown function (DUF1289);  InterPro: IPR010710 This family consists of a number of hypothetical bacterial proteins. The aligned region spans around 56 residues and contains 4 highly conserved cysteine residues towards the N terminus. The function of this family is unknown.
Probab=37.12  E-value=35  Score=23.85  Aligned_cols=23  Identities=22%  Similarity=-0.013  Sum_probs=19.4

Q ss_pred             HhcCCCCHHHHHHHHHHHHHHHH
Q 038617           20 RSGITKSVAWRKNQLRALIELLQ   42 (484)
Q Consensus        20 ~~w~~~~~~~R~~~L~~~a~~l~   42 (484)
                      ..|..++.++|.+++.++...++
T Consensus        28 ~~W~~~s~~er~~i~~~l~~R~~   50 (51)
T PF06945_consen   28 RDWKSMSDDERRAILARLRARRA   50 (51)
T ss_pred             HHHhhCCHHHHHHHHHHHHHHhc
Confidence            35999999999999999877543


No 155
>PF13376 OmdA:  Bacteriocin-protection, YdeI or OmpD-Associated
Probab=35.23  E-value=37  Score=24.78  Aligned_cols=35  Identities=11%  Similarity=0.088  Sum_probs=30.5

Q ss_pred             HHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHH
Q 038617            5 MGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIE   39 (484)
Q Consensus         5 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~   39 (484)
                      ++|+..+++.-..|..-|..++...|..++..+..
T Consensus         7 P~dl~~aL~~~p~a~~~f~~l~~~~rr~~i~wi~~   41 (63)
T PF13376_consen    7 PEDLEAALEANPEAKEFFESLTPSYRREYIRWINS   41 (63)
T ss_pred             CHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHH
Confidence            57889999988888889999999999999887764


No 156
>PF07045 DUF1330:  Protein of unknown function (DUF1330);  InterPro: IPR010753 This family consists of several hypothetical bacterial proteins of around 90 residues in length. The function of this family is unknown.; PDB: 2FIU_B 3HHL_A 3DCA_D 3LO3_I.
Probab=34.86  E-value=87  Score=22.87  Aligned_cols=23  Identities=17%  Similarity=0.225  Sum_probs=19.6

Q ss_pred             ceeeeeeeCCHHHHHHHHhcCCC
Q 038617          350 PILPIITLNNIQESIEFINSRPK  372 (484)
Q Consensus       350 Pvl~v~~~~~~~eai~~~n~~~~  372 (484)
                      ..+.|+.|+|.+.|.++.|+..|
T Consensus        39 ~~~viieFPs~~aa~~~~~speY   61 (65)
T PF07045_consen   39 DRVVIIEFPSMEAAKAWYNSPEY   61 (65)
T ss_dssp             SEEEEEEESSHHHHHHHHCSHHH
T ss_pred             CeEEEEECCCHHHHHHHHCCHhH
Confidence            57799999999999999887544


No 157
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=34.29  E-value=98  Score=25.36  Aligned_cols=74  Identities=18%  Similarity=0.213  Sum_probs=46.0

Q ss_pred             hhCCEEEEeCCcccHHHHHHHHHHhccccCccceeeccC--ChhHHHHHHh-CCCCeEEEeCChHH-------HHHHHHH
Q 038617          134 AAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNG--GVDVCEQLLQ-QKWNKIFFTGSPRV-------GSIVMSA  203 (484)
Q Consensus       134 aaGN~Vvlkps~~~~~t~~~l~~~l~~alp~g~v~~v~g--~~~~~~~L~~-~~vd~v~ftGs~~~-------g~~i~~~  203 (484)
                      ..|-.++-     ++-|+..|.+   ..++...+.-+++  .....+.+.+ .++|+|++|-+...       |..|.+.
T Consensus        23 ~~G~~i~A-----T~gTa~~L~~---~Gi~~~~v~~~~~~g~~~i~~~i~~~g~idlVIn~~~~~~~~~~~~dg~~iRR~   94 (112)
T cd00532          23 SDGFPLFA-----TGGTSRVLAD---AGIPVRAVSKRHEDGEPTVDAAIAEKGKFDVVINLRDPRRDRCTDEDGTALLRL   94 (112)
T ss_pred             HCCCEEEE-----CcHHHHHHHH---cCCceEEEEecCCCCCcHHHHHHhCCCCEEEEEEcCCCCcccccCCChHHHHHH
Confidence            44666653     3456666654   2255444444443  3445666666 56999999765433       8888888


Q ss_pred             HhcccCceeeec
Q 038617          204 AAKHLTPVTLEL  215 (484)
Q Consensus       204 a~~~~~~~~lel  215 (484)
                      |..+..|++..+
T Consensus        95 A~~~~Ip~~T~~  106 (112)
T cd00532          95 ARLYKIPVTTPN  106 (112)
T ss_pred             HHHcCCCEEECH
Confidence            888888877554


No 158
>TIGR00222 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase. Members of this family are 3-methyl-2-oxobutanoate hydroxymethyltransferase, the first enzyme of the pantothenate biosynthesis pathway. An alternate name is ketopantoate hydroxymethyltransferase.
Probab=32.29  E-value=4.7e+02  Score=25.26  Aligned_cols=159  Identities=12%  Similarity=0.129  Sum_probs=78.2

Q ss_pred             EEEEEccCchhHHHHHhHH-HHHHhhCCEEEEe--CCccc-HHHHHHHH---HHhccc---------cCccceeeccCCh
Q 038617          111 VVLICSAWNFPINLALEPL-IGAIAAGNTVMLK--PSELA-VECASFLA---ETIPLY---------LDCKAIKVTNGGV  174 (484)
Q Consensus       111 Vv~~i~p~n~P~~~~~~~i-~~ALaaGN~Vvlk--ps~~~-~~t~~~l~---~~l~~a---------lp~g~v~~v~g~~  174 (484)
                      .+.++++|.+|.+..+... +.+|..|.+...-  -.+.+ +.|-..+.   +.+.++         +|=+-++-.....
T Consensus        16 ~i~m~tayD~~sA~i~~~aG~d~ilvGdSlgm~~lG~~~t~~vtldem~~h~~aV~rg~~~~~vv~DmPf~sy~~~e~a~   95 (263)
T TIGR00222        16 KIVAITAYDYSFAKLFADAGVDVILVGDSLGMVVLGHDSTLPVTVADMIYHTAAVKRGAPNCLIVTDLPFMSYATPEQAL   95 (263)
T ss_pred             cEEEEeccCHHHHHHHHHcCCCEEEECccHhHHhcCCCCCCCcCHHHHHHHHHHHHhhCCCceEEeCCCcCCCCCHHHHH
Confidence            4678899999999888755 5555555544321  11111 22222222   222222         3333222110011


Q ss_pred             hHHHHHHh-CCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcC-C-C--CCCCHHHHHHHHHHhhcccCCC
Q 038617          175 DVCEQLLQ-QKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDT-L-S--SPLDIKVTVKRIIGGKFASCNG  249 (484)
Q Consensus       175 ~~~~~L~~-~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~-~-~--~daDl~~aa~~i~~~~~~~~~G  249 (484)
                      .....|++ ...+.|-.=|+......| +...+.+.|++.++| -.|--+.. + .  -.-+-+.+.+.+-+++.++.+|
T Consensus        96 ~na~rl~~eaGa~aVkiEgg~~~~~~i-~~l~~~gIpV~gHiG-ltPq~a~~~ggy~~qgrt~~~a~~~i~~A~a~e~AG  173 (263)
T TIGR00222        96 KNAARVMQETGANAVKLEGGEWLVETV-QMLTERGVPVVGHLG-LTPQSVNILGGYKVQGKDEEAAKKLLEDALALEEAG  173 (263)
T ss_pred             HHHHHHHHHhCCeEEEEcCcHhHHHHH-HHHHHCCCCEEEecC-CCceeEeecCCeeecCCCHHHHHHHHHHHHHHHHcC
Confidence            22456676 359999999997766655 455566788886663 33332222 0 0  0112333444444444443555


Q ss_pred             CccccCCceEEccchHHHHHHHHHHHHH
Q 038617          250 QVCVGVDYILVEKKFAATLIESLKTTIK  277 (484)
Q Consensus       250 q~C~a~~~v~V~~~i~~~f~~~l~~~~~  277 (484)
                      -.|      +|-|.+-.+..+.+.+++.
T Consensus       174 A~~------ivlE~vp~~~a~~It~~l~  195 (263)
T TIGR00222       174 AQL------LVLECVPVELAAKITEALA  195 (263)
T ss_pred             CCE------EEEcCCcHHHHHHHHHhCC
Confidence            433      3334444555555555443


No 159
>cd01390 HMGB-UBF_HMG-box HMGB-UBF_HMG-box, class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III members include nucleolar and mitochondrial transcription factors, UBF and mtTF1, which bind four-way DNA junctions.
Probab=31.46  E-value=88  Score=22.39  Aligned_cols=35  Identities=9%  Similarity=-0.206  Sum_probs=26.2

Q ss_pred             HHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHH
Q 038617           13 AELRQTFRSGITKSVAWRKNQLRALIELLQDNEDK   47 (484)
Q Consensus        13 ~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~   47 (484)
                      +.++.....|+.+|.++|..+.........+...+
T Consensus        30 ~i~~~~~~~W~~ls~~eK~~y~~~a~~~~~~y~~e   64 (66)
T cd01390          30 EVTKILGEKWKELSEEEKKKYEEKAEKDKERYEKE   64 (66)
T ss_pred             HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHh
Confidence            34455567799999999999988887766665554


No 160
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=31.06  E-value=95  Score=25.72  Aligned_cols=43  Identities=5%  Similarity=0.048  Sum_probs=31.0

Q ss_pred             ChhHHHHHHhCCCCeEEEeCC-------hHHHHHHHHHHhcccCceeeec
Q 038617          173 GVDVCEQLLQQKWNKIFFTGS-------PRVGSIVMSAAAKHLTPVTLEL  215 (484)
Q Consensus       173 ~~~~~~~L~~~~vd~v~ftGs-------~~~g~~i~~~a~~~~~~~~lel  215 (484)
                      +....+.+.+..+|+|++|-+       ..-+..|.+.|..+..|+.-.+
T Consensus        59 ~~~i~~~i~~g~i~~VInt~~~~~~~~~~~dg~~iRr~a~~~~Ip~~Ttl  108 (115)
T cd01422          59 DQQIGALIAEGEIDAVIFFRDPLTAQPHEPDVKALLRLCDVYNIPLATNR  108 (115)
T ss_pred             hhHHHHHHHcCceeEEEEcCCCCCCCcccccHHHHHHHHHHcCCCEEEcH
Confidence            344556665556999999965       3348889999988888877554


No 161
>COG5470 Uncharacterized conserved protein [Function unknown]
Probab=28.53  E-value=1.1e+02  Score=24.57  Aligned_cols=22  Identities=14%  Similarity=0.167  Sum_probs=18.5

Q ss_pred             eeeeeeCCHHHHHHHHhcCCCC
Q 038617          352 LPIITLNNIQESIEFINSRPKP  373 (484)
Q Consensus       352 l~v~~~~~~~eai~~~n~~~~g  373 (484)
                      +.|+.|+|.+.|.++-|+..|.
T Consensus        55 ~vviEFps~~~ar~~y~SpeYq   76 (96)
T COG5470          55 NVVIEFPSLEAARDCYNSPEYQ   76 (96)
T ss_pred             EEEEEcCCHHHHHHHhcCHHHH
Confidence            4678999999999998887765


No 162
>PF07085 DRTGG:  DRTGG domain;  InterPro: IPR010766 This presumed domain is about 120 amino acids in length. It is found associated with CBS domains IPR000644 from INTERPRO, as well as the CbiA domain IPR002586 from INTERPRO. The function of this domain is unknown. It is named the DRTGG domain after some of the most conserved residues. This domain may be very distantly related to a pair of CBS domains. There are no significant sequence similarities, but its length and association with CBS domains supports this idea. ; PDB: 3L31_B 3L2B_A 2IOJ_A.
Probab=25.80  E-value=92  Score=25.09  Aligned_cols=47  Identities=17%  Similarity=0.150  Sum_probs=28.9

Q ss_pred             cCccceeeccCChh-HHHHHHhCCCCeEEEeCChHHHHHHHHHHhccc
Q 038617          162 LDCKAIKVTNGGVD-VCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHL  208 (484)
Q Consensus       162 lp~g~v~~v~g~~~-~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~  208 (484)
                      +.+|.+-+++|+++ .-...+.+.+..+++||+......+.+.+.+..
T Consensus        38 ~~~~~lvIt~gdR~di~~~a~~~~i~~iIltg~~~~~~~v~~la~~~~   85 (105)
T PF07085_consen   38 LKPGDLVITPGDREDIQLAAIEAGIACIILTGGLEPSEEVLELAKELG   85 (105)
T ss_dssp             HHTTEEEEEETT-HHHHHHHCCTTECEEEEETT----HHHHHHHHHHT
T ss_pred             cCCCeEEEEeCCcHHHHHHHHHhCCCEEEEeCCCCCCHHHHHHHHHCC
Confidence            34466666767554 444445556899999999999998888776544


No 163
>PF09011 HMG_box_2:  HMG-box domain;  InterPro: IPR015101 This domain is predominantly found in Maelstrom homologue proteins. It has no known function. ; GO: 0005634 nucleus; PDB: 2EQZ_A 1V64_A 2CTO_A 1H5P_A 3TQ6_A 3FGH_A 3TMM_A 1J3X_A 2YRQ_A 1AAB_A ....
Probab=25.64  E-value=1e+02  Score=22.98  Aligned_cols=37  Identities=8%  Similarity=-0.109  Sum_probs=26.0

Q ss_pred             HHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 038617           13 AELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIF   49 (484)
Q Consensus        13 ~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la   49 (484)
                      +..+.+...|+.+|.++|..+-.++...=++...++.
T Consensus        34 e~~k~~~~~Wk~Ls~~EK~~Y~~~A~~~k~~y~~e~~   70 (73)
T PF09011_consen   34 EVMKEISERWKSLSEEEKEPYEERAKEDKERYEREMK   70 (73)
T ss_dssp             HHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4556667789999999999988887765555554443


No 164
>PF00505 HMG_box:  HMG (high mobility group) box;  InterPro: IPR000910 High mobility group (HMG or HMGB) proteins are a family of relatively low molecular weight non-histone components in chromatin. HMG1 (also called HMG-T in fish) and HMG2 are two highly related proteins that bind single-stranded DNA preferentially and unwind double-stranded DNA. Although they have no sequence specificity, they have a high affinity for bent or distorted DNA, and bend linear DNA. HMG1 and HMG2 contain two DNA-binding HMG-box domains (A and B) that show structural and functional differences, and have a long acidic C-terminal domain rich in aspartic and glutamic acid residues. The acidic tail modulates the affinity of the tandem HMG boxes in HMG1 and 2 for a variety of DNA targets. HMG1 and 2 appear to play important architectural roles in the assembly of nucleoprotein complexes in a variety of biological processes, for example V(D)J recombination, the initiation of transcription, and DNA repair []. The profile in this entry describing the HMG-domains is much more general than the signature. In addition to the HMG1 and HMG2 proteins, HMG-domains occur in single or multiple copies in the following protein classes; the SOX family of transcription factors; SRY sex determining region Y protein and related proteins []; LEF1 lymphoid enhancer binding factor 1 []; SSRP recombination signal recognition protein; MTF1 mitochondrial transcription factor 1; UBF1/2 nucleolar transcription factors; Abf2 yeast ARS-binding factor []; and Saccharomyces cerevisiae transcription factors Ixr1, Rox1, Nhp6a, Nhp6b and Spp41.; GO: 0003677 DNA binding; PDB: 1I11_A 1J3C_A 1J3D_A 1WZ6_A 1WGF_A 2D7L_A 1GT0_D 3U2B_C 2CRJ_A 2CS1_A ....
Probab=25.30  E-value=1.1e+02  Score=22.09  Aligned_cols=35  Identities=9%  Similarity=-0.184  Sum_probs=26.5

Q ss_pred             HHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 038617           15 LRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIF   49 (484)
Q Consensus        15 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la   49 (484)
                      .+.....|..+|.++|..+-.........+..++.
T Consensus        32 ~~~~~~~W~~l~~~eK~~y~~~a~~~~~~y~~~~~   66 (69)
T PF00505_consen   32 SKILAQMWKNLSEEEKAPYKEEAEEEKERYEKEMP   66 (69)
T ss_dssp             HHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44555679999999999988888777776666554


No 165
>COG2237 Predicted membrane protein [Function unknown]
Probab=25.03  E-value=57  Score=32.72  Aligned_cols=113  Identities=14%  Similarity=0.154  Sum_probs=68.0

Q ss_pred             eeeccCChhHHHHHHhC--CCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHhhc
Q 038617          167 IKVTNGGVDVCEQLLQQ--KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKF  244 (484)
Q Consensus       167 v~~v~g~~~~~~~L~~~--~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~~~  244 (484)
                      +|.+-+.-..-+.|-+.  ++....+||+..+|-.-.+..++.+-.++.+++-....+|.+   .++=|.++.-+ .|+ 
T Consensus        47 ~Nalf~alkiydeLk~~geDveIA~vsG~~~vgv~sd~~l~~qld~vl~~~~pd~av~VsD---GaeDe~ivPiI-~Sr-  121 (364)
T COG2237          47 VNALFAALKIYDELKAKGEDVEIAVVSGDKDVGVESDLKLSEQLDEVLSELDPDDAVVVSD---GAEDERIVPII-QSR-  121 (364)
T ss_pred             HHHHHHHHHHHHHHhccCCceEEEEEecCCCcchhhHHHHHHHHHHHHHcCCCcEEEEecc---Ccccchhhhhh-hcc-
Confidence            45554444555666654  277788999998776544455555556777887778888888   77666666544 333 


Q ss_pred             ccCCCCccccCCceEEccch-HHHHHHHHHHHHHhhcCCCC-CCCCcccc
Q 038617          245 ASCNGQVCVGVDYILVEKKF-AATLIESLKTTIKKFYGENP-KDSKSISR  292 (484)
Q Consensus       245 ~~~~Gq~C~a~~~v~V~~~i-~~~f~~~l~~~~~~~~~g~~-~~~~~~gp  292 (484)
                           -.-.+.+||+|.++- .|+-.=.+++.+++   -|| -..+.+||
T Consensus       122 -----~~I~svkrVVVrQs~~iEStYyli~~~l~k---tDpe~~~~vL~p  163 (364)
T COG2237         122 -----VKIDSVKRVVVRQSRGIESTYYLIKRYLKK---TDPEYSRTVLGP  163 (364)
T ss_pred             -----cceeEEEEEEEecCCChhHHHHHHHHHHhh---cChhhheeeech
Confidence                 345688999995543 13433344444443   234 33444554


No 166
>cd01424 MGS_CPS_II Methylglyoxal synthase-like domain from type II glutamine-dependent carbamoyl phosphate synthetase (CSP). CSP, a CarA and CarB heterodimer, catalyzes the production of carbamoyl phosphate which is subsequently employed in the metabolic pathways responsible for the synthesis of pyrimidine nucleotides or arginine. The MGS-like domain is the C-terminal domain of CarB and appears to play a regulatory role in CPS function by binding allosteric effector molecules, including UMP and ornithine.
Probab=24.95  E-value=1.2e+02  Score=24.60  Aligned_cols=72  Identities=15%  Similarity=0.158  Sum_probs=43.7

Q ss_pred             CCEEEEeCCcccHHHHHHHHHHhccccCccceeeccC-ChhHHHHHHhCCCCeEEEeCChH----HHHHHHHHHhcccCc
Q 038617          136 GNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNG-GVDVCEQLLQQKWNKIFFTGSPR----VGSIVMSAAAKHLTP  210 (484)
Q Consensus       136 GN~Vvlkps~~~~~t~~~l~~~l~~alp~g~v~~v~g-~~~~~~~L~~~~vd~v~ftGs~~----~g~~i~~~a~~~~~~  210 (484)
                      |..+.-     ++.|+..|.+   ..++...++.+++ +....+.+.+..+|.|+.+=+..    .+..+.+.|.....|
T Consensus        26 G~~l~a-----T~gT~~~l~~---~gi~~~~v~~~~~~~~~i~~~i~~~~id~vIn~~~~~~~~~~~~~iRR~Av~~~ip   97 (110)
T cd01424          26 GFKLVA-----TEGTAKYLQE---AGIPVEVVNKVSEGRPNIVDLIKNGEIQLVINTPSGKRAIRDGFSIRRAALEYKVP   97 (110)
T ss_pred             CCEEEE-----chHHHHHHHH---cCCeEEEEeecCCCchhHHHHHHcCCeEEEEECCCCCccCccHHHHHHHHHHhCCC
Confidence            666543     3345555543   2255555555544 44455555555699998864332    378888999888888


Q ss_pred             eeeec
Q 038617          211 VTLEL  215 (484)
Q Consensus       211 ~~lel  215 (484)
                      ++.+.
T Consensus        98 l~T~~  102 (110)
T cd01424          98 YFTTL  102 (110)
T ss_pred             EEecH
Confidence            87543


No 167
>smart00398 HMG high mobility group.
Probab=24.67  E-value=1.7e+02  Score=21.04  Aligned_cols=35  Identities=6%  Similarity=-0.214  Sum_probs=26.1

Q ss_pred             HHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 038617           15 LRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIF   49 (484)
Q Consensus        15 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la   49 (484)
                      .+.....|+.+|.++|..+........+++..++.
T Consensus        33 ~~~~~~~W~~l~~~ek~~y~~~a~~~~~~y~~~~~   67 (70)
T smart00398       33 SKKLGERWKLLSEEEKAPYEEKAKKDKERYEEEMP   67 (70)
T ss_pred             HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34455679999999999998888777666665543


No 168
>PF03795 YCII:  YCII-related domain;  InterPro: IPR005545 The majority of proteins in this group contain a single copy of this domain, though it is also found as a repeat (e.g. in Q9AJZ7 from SWISSPROT). A strongly conserved histidine and a aspartate suggest that the domain has an enzymatic function. This entry also covers what was previously known as the DGPF domain (COG3795). Although its function is unknown it is found fused to a sigma-70 factor family domain in Q9A8M4 from SWISSPROT, suggesting that this domain may plays a role in transcription initiation. This domain is named after the most conserved motif in the alignment.; PDB: 1S7I_A 1MWQ_A.
Probab=22.76  E-value=1.4e+02  Score=23.25  Aligned_cols=28  Identities=21%  Similarity=0.290  Sum_probs=20.4

Q ss_pred             cceecceeeeeeeCCHHHHHHHHhcCCCC
Q 038617          345 EEIFGPILPIITLNNIQESIEFINSRPKP  373 (484)
Q Consensus       345 eE~fgPvl~v~~~~~~~eai~~~n~~~~g  373 (484)
                      .|..| -+.|+.++|.+||.+++.+.++-
T Consensus        54 ~~~~g-g~~i~~a~s~e~A~~~~~~dP~~   81 (95)
T PF03795_consen   54 KEFIG-GFIIVEAESREEAEEIAKEDPFV   81 (95)
T ss_dssp             CSEEE-EEEEEEESSHHHHHHHHCT-HHH
T ss_pred             cccee-EEEEEEeCCHHHHHHHHHhCCcc
Confidence            45555 34567889999999999987654


No 169
>cd01388 SOX-TCF_HMG-box SOX-TCF_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and transcription factor-like proteins, TCF-1, -3, -4, and LEF-1. They appear to bind the minor groove of the A/T C A A A G/C-motif.
Probab=22.40  E-value=1.6e+02  Score=21.76  Aligned_cols=35  Identities=9%  Similarity=-0.220  Sum_probs=25.0

Q ss_pred             HHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHH
Q 038617           13 AELRQTFRSGITKSVAWRKNQLRALIELLQDNEDK   47 (484)
Q Consensus        13 ~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~   47 (484)
                      +.++.....|+.++.+++..+.+......+++.++
T Consensus        31 eisk~l~~~Wk~ls~~eK~~y~~~a~~~k~~y~~~   65 (72)
T cd01388          31 AISKILGDRWKALSNEEKQPYYEEAKKLKELHMKL   65 (72)
T ss_pred             HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHH
Confidence            34455667899999999988877776666655443


No 170
>PF11181 YflT:  Heat induced stress protein YflT
Probab=20.94  E-value=1.9e+02  Score=23.27  Aligned_cols=44  Identities=20%  Similarity=0.297  Sum_probs=33.2

Q ss_pred             eeeeCCHHHHHHHHhc---CCCC-ceEEEecCCHHHHHHHhhccceee
Q 038617          354 IITLNNIQESIEFINS---RPKP-LAIYAFTKDETFKKQIVSGTSSGS  397 (484)
Q Consensus       354 v~~~~~~~eai~~~n~---~~~g-l~a~v~t~d~~~~~~~~~~l~~g~  397 (484)
                      |-.|++.+||++.++.   .+|. --.+|+|+|.+....+....++..
T Consensus         3 Igv~~~~~E~~~~I~~L~~~Gy~~ddI~Vva~d~~~~~~l~~~t~~~~   50 (103)
T PF11181_consen    3 IGVYDNEEEALSAIEELKAQGYSEDDIYVVAKDKDRTERLADQTDTNT   50 (103)
T ss_pred             EEEECCHHHHHHHHHHHHHcCCCcccEEEEEcCchHHHHHHHhcCCce
Confidence            3457888888877776   4555 467999999999999988874433


No 171
>COG1438 ArgR Arginine repressor [Transcription]
Probab=20.39  E-value=3.8e+02  Score=23.53  Aligned_cols=46  Identities=20%  Similarity=0.255  Sum_probs=33.4

Q ss_pred             HHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc-cCccceeeccCC
Q 038617          124 LALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY-LDCKAIKVTNGG  173 (484)
Q Consensus       124 ~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a-lp~g~v~~v~g~  173 (484)
                      .....+...=-.||-+|+|..|-   .+..++.++... .| +.+..+.|+
T Consensus        80 ~~~~~v~~vd~~~~~ivlkT~PG---~A~~ia~~lD~~~~~-eIlGTIaGd  126 (150)
T COG1438          80 YLKDLVLSIDRNGNLIVLKTSPG---AAQLIARLLDSLAKD-EILGTIAGD  126 (150)
T ss_pred             HHHHHheeeccCCcEEEEEeCCc---hHHHHHHHHHhcCch-hhheeeeCC
Confidence            34455556667899999998874   677788888776 45 777777664


No 172
>KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=20.21  E-value=58  Score=34.16  Aligned_cols=108  Identities=9%  Similarity=0.030  Sum_probs=70.0

Q ss_pred             HHHHHHHHHHhhchhc-CCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceee---eeeeCCHHHHHHHHhcCC
Q 038617          296 EYHFERLRKLLKDPLV-ADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILP---IITLNNIQESIEFINSRP  371 (484)
Q Consensus       296 ~~~~~~~~~~i~~a~~-~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~---v~~~~~~~eai~~~n~~~  371 (484)
                      ..+..++...+.+..+ +...+...+..+.|.++.++...|++...+.++  .|++..-   .....+..+.+.+.+..+
T Consensus        81 ~~~R~~~L~~~Adlie~~~~~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~r--y~ag~ad~~~~~~~~~~~~~~~yt~~eP  158 (501)
T KOG2450|consen   81 AAERGRLLRKLADLIEQDADVLAALEVLDNGKPYPEALVSDLPPAIDCFR--YYAGWADKIHGSTIPTDGEFFAYTRREP  158 (501)
T ss_pred             HHHHHHHHHHHHHHHHhhhHHHhhhcccccCCcchhhhhcCchhhhhHHH--hhccchhhcccccCCCCCceEEEecCCc
Confidence            4455555555555543 345555566666788888888778877666553  4554442   334455667788888999


Q ss_pred             CCceEEEecCC---HHHHHHHhhccceeeEEECCCcc
Q 038617          372 KPLAIYAFTKD---ETFKKQIVSGTSSGSLIFNDTLV  405 (484)
Q Consensus       372 ~gl~a~v~t~d---~~~~~~~~~~l~~g~v~iN~~~~  405 (484)
                      .|-...|--=|   .-.+-+++-.|.+|+++||.+..
T Consensus       159 ~GV~G~I~pWN~Pllm~awKlaPALa~GNtvV~Kpae  195 (501)
T KOG2450|consen  159 IGVCGQIIPWNFPLLMQAWKLAPALAAGNTVVLKPAE  195 (501)
T ss_pred             ceeeeEeccCchHHHHHHHhhhhHHhhCcEEEecCCC
Confidence            99555444444   33455778889999999998754


Done!