Query 038617
Match_columns 484
No_of_seqs 235 out of 1351
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 22:27:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038617.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038617hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sza_A Aldehyde dehydrogenase, 100.0 1E-100 4E-105 797.4 48.6 451 3-462 15-468 (469)
2 2wme_A BADH, betaine aldehyde 100.0 5E-100 2E-104 794.3 44.3 433 2-444 40-483 (490)
3 3iwj_A Putative aminoaldehyde 100.0 8.9E-97 3E-101 774.9 47.5 437 2-445 41-490 (503)
4 3ros_A NAD-dependent aldehyde 100.0 7.2E-97 2E-101 770.7 45.9 433 2-446 22-460 (484)
5 4f3x_A Putative aldehyde dehyd 100.0 6.7E-97 2E-101 773.6 42.3 433 2-443 58-496 (498)
6 3rh9_A Succinate-semialdehyde 100.0 1.6E-96 5E-101 771.5 43.7 433 2-445 45-485 (506)
7 3ifg_A Succinate-semialdehyde 100.0 6.6E-97 2E-101 771.8 40.5 432 2-443 46-483 (484)
8 3ed6_A Betaine aldehyde dehydr 100.0 3.6E-96 1E-100 771.2 46.3 433 2-444 66-510 (520)
9 3ek1_A Aldehyde dehydrogenase; 100.0 1.2E-96 4E-101 772.0 40.1 432 2-444 66-502 (504)
10 1wnd_A Putative betaine aldehy 100.0 5.2E-96 2E-100 766.3 44.7 433 2-443 56-494 (495)
11 3lns_A Benzaldehyde dehydrogen 100.0 2E-95 7E-100 757.2 48.1 432 2-443 24-456 (457)
12 2o2p_A Formyltetrahydrofolate 100.0 4.9E-96 2E-100 769.6 43.7 435 2-443 70-516 (517)
13 3u4j_A NAD-dependent aldehyde 100.0 1.1E-95 4E-100 768.8 45.0 434 2-445 57-499 (528)
14 3qan_A 1-pyrroline-5-carboxyla 100.0 1.2E-95 4E-100 770.2 44.2 435 2-444 70-516 (538)
15 3i44_A Aldehyde dehydrogenase; 100.0 2.6E-95 9E-100 761.4 46.5 428 2-442 59-496 (497)
16 1a4s_A ALDH, betaine aldehyde 100.0 1.6E-95 6E-100 764.7 44.9 433 1-444 53-496 (503)
17 1bxs_A Aldehyde dehydrogenase; 100.0 1.5E-95 5E-100 764.0 43.2 432 2-443 54-495 (501)
18 3k2w_A Betaine-aldehyde dehydr 100.0 7.6E-96 3E-100 766.8 41.0 433 2-444 46-488 (497)
19 1o04_A Aldehyde dehydrogenase, 100.0 9.8E-96 3E-100 765.1 41.1 432 2-443 53-494 (500)
20 3r31_A BADH, betaine aldehyde 100.0 6.8E-96 2E-100 768.5 39.4 433 2-447 48-491 (517)
21 3b4w_A Aldehyde dehydrogenase; 100.0 1.8E-95 6E-100 763.0 41.7 431 2-443 42-481 (495)
22 3prl_A NADP-dependent glyceral 100.0 3.6E-95 1.2E-99 761.7 43.9 432 2-444 45-483 (505)
23 4e4g_A Methylmalonate-semialde 100.0 2E-95 7E-100 765.7 42.0 434 2-444 60-505 (521)
24 2d4e_A 5-carboxymethyl-2-hydro 100.0 4.9E-95 1.7E-99 763.1 44.4 432 2-444 60-505 (515)
25 2imp_A Lactaldehyde dehydrogen 100.0 4.2E-95 1.4E-99 759.0 43.6 432 2-443 40-478 (479)
26 1uzb_A 1-pyrroline-5-carboxyla 100.0 1.5E-94 5.1E-99 760.3 47.3 435 2-443 70-515 (516)
27 3pqa_A Lactaldehyde dehydrogen 100.0 5.3E-95 1.8E-99 757.0 43.3 427 2-445 30-465 (486)
28 3etf_A Putative succinate-semi 100.0 1.7E-94 5.8E-99 752.3 45.7 432 2-444 25-461 (462)
29 3jz4_A Succinate-semialdehyde 100.0 8.2E-95 2.8E-99 757.2 43.2 432 2-443 43-480 (481)
30 2w8n_A Succinate-semialdehyde 100.0 8.5E-95 2.9E-99 757.0 40.5 432 2-443 44-485 (487)
31 4h7n_A Aldehyde dehydrogenase; 100.0 2.6E-94 9E-99 752.1 43.8 441 2-451 24-470 (474)
32 2j6l_A Aldehyde dehydrogenase 100.0 4.2E-94 1.4E-98 754.1 44.1 433 2-443 55-498 (500)
33 3r64_A NAD dependent benzaldeh 100.0 6.9E-94 2.4E-98 753.8 43.9 433 2-445 46-486 (508)
34 1uxt_A Glyceraldehyde-3-phosph 100.0 3.1E-94 1.1E-98 754.6 40.9 440 2-453 50-500 (501)
35 2ve5_A BADH, betaine aldehyde 100.0 9.2E-94 3.2E-98 751.4 44.1 433 2-444 40-483 (490)
36 4dng_A Uncharacterized aldehyd 100.0 1.3E-93 4.6E-98 749.3 44.1 433 2-444 40-478 (485)
37 1euh_A NADP dependent non phos 100.0 1.7E-93 5.9E-98 746.1 41.1 427 2-443 36-473 (475)
38 1t90_A MMSDH, probable methylm 100.0 4.6E-93 1.6E-97 744.3 40.8 433 2-444 39-480 (486)
39 3ty7_A Putative aldehyde dehyd 100.0 2.3E-93 7.9E-98 746.3 36.6 425 2-441 41-474 (478)
40 4e3x_A Delta-1-pyrroline-5-car 100.0 5E-92 1.7E-96 744.0 42.1 444 2-454 96-560 (563)
41 4f9i_A Proline dehydrogenase/d 100.0 6E-90 2.1E-94 765.5 43.9 435 2-444 564-1010(1026)
42 3ju8_A Succinylglutamic semial 100.0 6.4E-90 2.2E-94 721.3 41.1 426 2-444 38-471 (490)
43 3haz_A Proline dehydrogenase; 100.0 4.5E-88 1.5E-92 748.9 43.9 433 2-444 546-987 (1001)
44 2y53_A Aldehyde dehydrogenase 100.0 1.8E-88 6.1E-93 717.4 37.6 433 3-444 41-519 (534)
45 3v4c_A Aldehyde dehydrogenase 100.0 3.2E-86 1.1E-90 699.3 37.5 425 2-440 59-514 (528)
46 1ez0_A ALDH, aldehyde dehydrog 100.0 5.9E-85 2E-89 686.9 37.6 423 2-441 26-480 (510)
47 1vlu_A Gamma-glutamyl phosphat 100.0 6.6E-81 2.3E-85 647.9 24.6 405 7-458 15-449 (468)
48 3k9d_A LMO1179 protein, aldehy 100.0 1.5E-79 5.2E-84 639.1 34.6 410 3-443 9-448 (464)
49 2h5g_A Delta 1-pyrroline-5-car 100.0 7.3E-80 2.5E-84 639.3 22.7 402 2-461 25-447 (463)
50 4ghk_A Gamma-glutamyl phosphat 100.0 1.5E-76 5.3E-81 612.7 31.2 390 5-445 25-440 (444)
51 1o20_A Gamma-glutamyl phosphat 100.0 9.5E-77 3.3E-81 611.4 27.1 388 5-445 13-423 (427)
52 3my7_A Alcohol dehydrogenase/a 100.0 5E-76 1.7E-80 610.7 31.4 410 2-443 3-448 (452)
53 4gic_A HDH, histidinol dehydro 97.1 0.25 8.5E-06 49.0 27.3 337 18-439 23-398 (423)
54 1kae_A HDH, histidinol dehydro 96.6 0.65 2.2E-05 46.2 23.1 326 28-439 30-391 (434)
55 3v42_A Folliculin; tumor suppr 57.9 14 0.00049 33.4 5.5 69 126-199 21-89 (226)
56 2fiu_A Conserved hypothetical 51.7 27 0.00093 27.0 5.6 22 351-372 55-76 (99)
57 1s7i_A Hypothetical protein PA 43.4 56 0.0019 26.3 6.4 29 344-373 80-108 (124)
58 2yvq_A Carbamoyl-phosphate syn 38.8 32 0.0011 28.5 4.4 72 135-215 49-132 (143)
59 2xw6_A MGS, methylglyoxal synt 32.3 22 0.00076 29.3 2.2 79 128-213 23-110 (134)
60 1b93_A Protein (methylglyoxal 29.9 83 0.0028 26.4 5.4 114 110-249 12-135 (152)
61 3lo3_A Uncharacterized conserv 27.3 88 0.003 23.7 4.9 23 350-372 53-75 (94)
62 3fgh_A Transcription factor A, 26.7 70 0.0024 22.2 3.9 37 14-50 29-65 (67)
63 2bon_A Lipid kinase; DAG kinas 26.5 1.6E+02 0.0055 27.8 7.7 59 183-244 81-146 (332)
64 2co9_A Thymus high mobility gr 24.9 1.7E+02 0.0058 22.3 6.2 43 15-57 49-91 (102)
65 2ioj_A Hypothetical protein AF 24.7 44 0.0015 27.3 2.9 46 165-210 53-100 (139)
66 3hhl_A RPA0582; alpha-beta-bar 22.4 1E+02 0.0036 25.5 4.7 65 293-373 45-111 (143)
67 1use_A VAsp, vasodilator-stimu 21.9 74 0.0025 20.7 2.7 28 30-57 13-40 (45)
68 2i2c_A Probable inorganic poly 21.3 2.3E+02 0.008 25.8 7.5 88 139-245 5-96 (272)
69 3u3x_A Oxidoreductase; structu 20.6 4.5E+02 0.015 24.9 9.7 124 130-282 43-168 (361)
No 1
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=1.1e-100 Score=797.37 Aligned_cols=451 Identities=42% Similarity=0.728 Sum_probs=417.5
Q ss_pred CCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHH
Q 038617 3 AAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCL 82 (484)
Q Consensus 3 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~ 82 (484)
.+.+|+++|+++|++||++|+.++.++|.++|++++++|+++.++|++++++|+|||..++...|+..+...++++++.+
T Consensus 15 ~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~ 94 (469)
T 3sza_A 15 SHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQKL 94 (469)
T ss_dssp ---CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999997679999999999999999
Q ss_pred HHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhcccc
Q 038617 83 DKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYL 162 (484)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~al 162 (484)
..|..+..........+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|++++.+++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~al 174 (469)
T 3sza_A 95 PEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYL 174 (469)
T ss_dssp HHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHHS
T ss_pred HhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhC
Confidence 88876543322222234467889999999999999999999999999999999999999999999999999999999999
Q ss_pred CccceeeccCChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHh
Q 038617 163 DCKAIKVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGG 242 (484)
Q Consensus 163 p~g~v~~v~g~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~ 242 (484)
|+|++|+++|+.+.+..|+.|+||+|+||||+.+|+.|++.+++++||+++|||||||+||++ |||++.|++.++++
T Consensus 175 P~gvv~vv~g~~~~~~~ll~~~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~---dADl~~Aa~~i~~~ 251 (469)
T 3sza_A 175 DKDLYPVINGGVPETTELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDK---NCDLDVACRRIAWG 251 (469)
T ss_dssp CTTTSCBCCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECT---TSCHHHHHHHHHHH
T ss_pred CcceEEEEECCHHHHHHHHhcCCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECC---CCCHHHHHHHHHHH
Confidence 999999999987778889888999999999999999999999999999999999999999999 99999999999999
Q ss_pred hcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhcCCceeeCCCc
Q 038617 243 KFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLL 321 (484)
Q Consensus 243 ~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~~ 321 (484)
+|. |+||.|++++|||||+++||+|+++|+++++++. |+| ++++++||++++.+++++.+++ +++++++||..
T Consensus 252 ~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~rv~~~i----~ga~v~~GG~~ 325 (469)
T 3sza_A 252 KFM-NSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFY-GEDAKKSRDYGRIISARHFQRVMGLI----EGQKVAYGGTG 325 (469)
T ss_dssp HHG-GGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHHH-CSCGGGCTTCCCCSCHHHHHHHHHHH----TTSEEEECCCE
T ss_pred HHh-cCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHhc-CCCCcccCcccccCCHHHHHHHHHHH----cCCEEEeCCcc
Confidence 999 9999999999999999999999999999999986 555 8899999999999999999999 37899999987
Q ss_pred CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccceeeEEEC
Q 038617 322 DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSGSLIFN 401 (484)
Q Consensus 322 ~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN 401 (484)
+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||
T Consensus 326 ~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~vN 405 (469)
T 3sza_A 326 DAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAAN 405 (469)
T ss_dssp ETTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEES
T ss_pred CCCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEEe
Confidence 66899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecCcCC--CCCCCCCCchHHHH
Q 038617 402 DTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSFFLE--LEPRYPPWNDFKMK 462 (484)
Q Consensus 402 ~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~~~--~~~~~~p~~~~~~~ 462 (484)
+...+...+.+||||+|.||+|+++|.+|+++||+.|+|+.+..+.+ .+++||||+++|.+
T Consensus 406 ~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~~~~~~~~~~~yppy~~~~~~ 468 (469)
T 3sza_A 406 DVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRPLMNDEGLKVRYPPSPAKMTQ 468 (469)
T ss_dssp CSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECCSSCCGGGGGGSSSCCC----
T ss_pred CCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEECCcccccccccccCCCCccccc
Confidence 98765567899999999999999999999999999999999887755 67999999987765
No 2
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=4.8e-100 Score=794.29 Aligned_cols=433 Identities=24% Similarity=0.333 Sum_probs=405.3
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+++|+++|.++|++++++|++++++|++++++|+|||+.+++..|+..+++.+++++..
T Consensus 40 ~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~ 119 (490)
T 2wme_A 40 RASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGL 119 (490)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 57899999999999999999999999999999999999999999999999999999999999866799999999999988
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+++..... ....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+|+..|++++.++
T Consensus 120 ~~~~~~~~~----~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~ea 195 (490)
T 2wme_A 120 VPAIEGEQI----PLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEA 195 (490)
T ss_dssp GGGCCEEEE----EEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred cccccCccc----cccCCcceeEEecceeEEEEeccccCcchhhhhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHh
Confidence 766533221 1123446788999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHH-HHhcccCceeeecCCcCceEEcCCCCCCCHHHHHH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMS-AAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVK 237 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~-~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~ 237 (484)
+|+|++|+|+| +.++++.|++|| ||+|+||||+.+|+++.+ .+++++||+++|||||||+||++ |||++.|++
T Consensus 196 GlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a~~~lk~v~lELGGk~p~iV~~---dAdl~~A~~ 272 (490)
T 2wme_A 196 GVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFP---DADLDRAAD 272 (490)
T ss_dssp TCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECT---TSCHHHHHH
T ss_pred CCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhhccCCceEEEEcCCcCeEEEcc---CccHHHHHH
Confidence 99999999999 568999999998 999999999999998876 55678999999999999999999 999999999
Q ss_pred HHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchh-cCCce
Q 038617 238 RIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPL-VADAI 315 (484)
Q Consensus 238 ~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~-~~~~~ 315 (484)
.+++++|. |+||.|++++|+|||+++||+|+++|+++++++++||| ++++++||++++.+++++.++|+++. +|+++
T Consensus 273 ~~~~~~~~-n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v 351 (490)
T 2wme_A 273 IAVMANFF-SSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARL 351 (490)
T ss_dssp HHHHHHHG-GGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHhc-cCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccccCccCCcCCHHHHHHHHHHHHHHHhcCCEE
Confidence 99999999 99999999999999999999999999999999999999 89999999999999999999999987 47899
Q ss_pred eeCCCcC-----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHh
Q 038617 316 VHGGLLD-----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIV 390 (484)
Q Consensus 316 ~~gg~~~-----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 390 (484)
++||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++
T Consensus 352 ~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~ 431 (490)
T 2wme_A 352 LCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAI 431 (490)
T ss_dssp EECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHH
T ss_pred EECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHH
Confidence 9999753 36899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 391 SGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 391 ~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
+++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|+++.
T Consensus 432 ~~l~aG~v~iN~~~~--~~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v~i~~ 483 (490)
T 2wme_A 432 HRLEAGICWINTWGE--SPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVEL 483 (490)
T ss_dssp HHSCCSEEEESCCSC--CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred HHCCeeEEEEeCCCC--CCCCCCcccccccccCchhHHHHHHHhhceeEEEEEC
Confidence 999999999997654 4678999999999999999999999999999999875
No 3
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=8.9e-97 Score=774.90 Aligned_cols=437 Identities=27% Similarity=0.411 Sum_probs=409.3
Q ss_pred CCCHHHHHHHHHHHHHHhH-----hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFR-----SGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAK 76 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~ 76 (484)
.++.+|+++|+++|++||+ .|+.++.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.++
T Consensus 41 ~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~ 119 (503)
T 3iwj_A 41 AATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAAW-DIDDVAGCFE 119 (503)
T ss_dssp CCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHH
Confidence 4789999999999999999 999999999999999999999999999999999999999999975 9999999999
Q ss_pred HHHHHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHH
Q 038617 77 YALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAE 156 (484)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~ 156 (484)
+++...+++.+...........+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..|++
T Consensus 120 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 199 (503)
T 3iwj_A 120 YYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELASLTCLELGE 199 (503)
T ss_dssp HHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHH
T ss_pred HHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchHHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHH
Confidence 99999888765432111111123467889999999999999999999999999999999999999999999999999999
Q ss_pred Hhccc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHH
Q 038617 157 TIPLY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIK 233 (484)
Q Consensus 157 ~l~~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~ 233 (484)
++.++ +|+|++|+++| +.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|||||||+||++ |||++
T Consensus 200 l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~l~~v~lElGGk~p~iV~~---dADl~ 276 (503)
T 3iwj_A 200 ICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAAAQLVKPVSLELGGKSPLVVFE---DVDLD 276 (503)
T ss_dssp HHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHHHHHHHHGGGTCCEEEECCCCEEEEECS---SSCHH
T ss_pred HHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHHHHHHHHhcCCCCEEEECCCCCceEEcC---CCCHH
Confidence 99999 99999999999 457899999997 99999999999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-
Q 038617 234 VTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV- 311 (484)
Q Consensus 234 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~- 311 (484)
.|++.+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+
T Consensus 277 ~Aa~~i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ 355 (503)
T 3iwj_A 277 KAAEWAIFGCFW-TNGQICSATSRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSE 355 (503)
T ss_dssp HHHHHHHHHHTG-GGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh-cCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHC
Confidence 999999999999 99999999999999999999999999999999999999 889999999999999999999999874
Q ss_pred CCceeeCCCcC---CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHH
Q 038617 312 ADAIVHGGLLD---KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQ 388 (484)
Q Consensus 312 ~~~~~~gg~~~---~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~ 388 (484)
|+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++
T Consensus 356 Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~ 435 (503)
T 3iwj_A 356 GATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCER 435 (503)
T ss_dssp TCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHH
T ss_pred CCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHH
Confidence 78999999764 479999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecC
Q 038617 389 IVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSF 445 (484)
Q Consensus 389 ~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~ 445 (484)
+++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|+++..
T Consensus 436 ~~~~l~aG~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~k~v~~~~~ 490 (503)
T 3iwj_A 436 VTKAFKAGIVWVNCSQP--CFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQYIS 490 (503)
T ss_dssp HHHHCCSSEEEESSSCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEECC
T ss_pred HHHhCCcceEEEcCCCC--CCCCCCcCCcCcccCCCcchHHHHHHhhCeEEEEEeCC
Confidence 99999999999998653 46889999999999999999999999999999988753
No 4
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=7.2e-97 Score=770.75 Aligned_cols=433 Identities=22% Similarity=0.339 Sum_probs=409.2
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..+++ .|+..+++.+++++..
T Consensus 22 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~ 100 (484)
T 3ros_A 22 NPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK-EEVELCVSICNYYADH 100 (484)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999998 5999999999999999
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
++++.++.... ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.|+..|++++.++
T Consensus 101 ~~~~~~~~~~~----~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~a 176 (484)
T 3ros_A 101 GPEMLKPTKLN----SDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRA 176 (484)
T ss_dssp HHHHTSCEEEC----CTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred HHHhcCCeecc----CCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh
Confidence 99887654321 13457789999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccCCh-hHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 162 -LDCKAIKVTNGGV-DVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 162 -lp~g~v~~v~g~~-~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+|+|++|+++|+. +.++ |++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++.
T Consensus 177 GlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~---dADl~~Aa~~ 252 (484)
T 3ros_A 177 GAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVLD---DADPQVLRNV 252 (484)
T ss_dssp TCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCEEEECT---TCCHHHHHHH
T ss_pred CcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCcceeCC---CCCHHHHHHH
Confidence 9999999999965 4566 99997 99999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV 316 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~ 316 (484)
+++++|. |+||.|++++|||||+++||+|+++|+++++++++||| ++++++||++++.+++++.++|+++.+ |++++
T Consensus 253 i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~ 331 (484)
T 3ros_A 253 LNDARTY-NDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVF 331 (484)
T ss_dssp HTTTTTG-GGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHhc-CCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEE
Confidence 9999999 99999999999999999999999999999999999999 899999999999999999999999874 68999
Q ss_pred eCCCc-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccce
Q 038617 317 HGGLL-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS 395 (484)
Q Consensus 317 ~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~ 395 (484)
+||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++
T Consensus 332 ~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~a 411 (484)
T 3ros_A 332 YQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIET 411 (484)
T ss_dssp EECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHHHHHHHHHSCS
T ss_pred ecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCcc
Confidence 99975 35799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecCc
Q 038617 396 GSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSFF 446 (484)
Q Consensus 396 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~ 446 (484)
|+|+||+... ..+.+||||+|.||+|+++|++|+++|++.|+|+++...
T Consensus 412 G~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~~ 460 (484)
T 3ros_A 412 GMTVINGRWI--TSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVTKN 460 (484)
T ss_dssp SCCEETSCCC--CCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEECGGG
T ss_pred ceEEECCCCC--CCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEECCCC
Confidence 9999999654 578899999999999999999999999999999887543
No 5
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=6.7e-97 Score=773.56 Aligned_cols=433 Identities=24% Similarity=0.359 Sum_probs=406.9
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+.++.++|.++|++++++|+++.++|++++++|+|||..++...|+..+++.+++++..
T Consensus 58 ~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~ 137 (498)
T 4f3x_A 58 EASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGA 137 (498)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999446999999999999988
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
++++..... +....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..|++++.++
T Consensus 138 ~~~~~~~~~---~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea 214 (498)
T 4f3x_A 138 VRNLHAPAA---GEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI 214 (498)
T ss_dssp TTCCEEECB---EEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT
T ss_pred HHHhcCccc---cCCcccccceEEEcCcceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh
Confidence 876533211 11123456788999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617 162 LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI 239 (484)
Q Consensus 162 lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i 239 (484)
+|+|++|+++| +.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++.+
T Consensus 215 lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~---dADl~~Aa~~i 291 (498)
T 4f3x_A 215 LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAAKTVKRTHLELGGKAPVIVYG---DADLEAVVNGI 291 (498)
T ss_dssp SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEECT---TSCHHHHHHHH
T ss_pred CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCceeecCCCCCcEEECC---CCCHHHHHHHH
Confidence 99999999999 567999999997 99999999999999999999999999999999999999999 99999999999
Q ss_pred HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CC-cee
Q 038617 240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-AD-AIV 316 (484)
Q Consensus 240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~-~~~ 316 (484)
++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ |+ +++
T Consensus 292 ~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~ 370 (498)
T 4f3x_A 292 RTFGYY-NAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEIT 370 (498)
T ss_dssp HHHTTG-GGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEE
T ss_pred HHHHHh-cCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEE
Confidence 999999 99999999999999999999999999999999999999 889999999999999999999999874 67 899
Q ss_pred eCCCc-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccce
Q 038617 317 HGGLL-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS 395 (484)
Q Consensus 317 ~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~ 395 (484)
+||.. +.+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++
T Consensus 371 ~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~a 450 (498)
T 4f3x_A 371 TGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQY 450 (498)
T ss_dssp ECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCS
T ss_pred ECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCc
Confidence 99975 34799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 396 GSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 396 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
|+|+||+++.+ .+.+||||+|.||+|+++|.+|+++|++.|+|+++
T Consensus 451 G~V~vN~~~~~--~~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~~~ 496 (498)
T 4f3x_A 451 GCTWINTHFML--TNEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMIN 496 (498)
T ss_dssp SEEEESCCSCC--CTTSCBCCSGGGEECCBSHHHHHHHTEEEEEEEEE
T ss_pred ceEEEcCCCCC--CCCCCcCCcCcCCcCccchHHHHHHhhceEEEEEe
Confidence 99999998764 48899999999999999999999999999999875
No 6
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=1.6e-96 Score=771.46 Aligned_cols=433 Identities=24% Similarity=0.352 Sum_probs=407.9
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..+++ .|+..+++.+++++..
T Consensus 45 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~ 123 (506)
T 3rh9_A 45 SMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENREEIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKH 123 (506)
T ss_dssp CCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999998 5999999999999999
Q ss_pred HHHhhcCccccCccccCCCcceEEe-ecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhcc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVS-EPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPL 160 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~-~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~ 160 (484)
.+++.+... +. ..+...++++ +|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|++++.+
T Consensus 124 ~~~~~~~~~---~~-~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~e 199 (506)
T 3rh9_A 124 ISALDSHTI---PE-KPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDK 199 (506)
T ss_dssp GGGGCCEEC---SC-CGGGCEEEEEEEECCSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTT
T ss_pred HHHhcCccc---cc-CCCceeeEeecccceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHH
Confidence 988754321 11 1344667888 999999999999999999999999999999999999999999999999999999
Q ss_pred c-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHH
Q 038617 161 Y-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVK 237 (484)
Q Consensus 161 a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~ 237 (484)
+ +|+|++|+++| +.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++
T Consensus 200 aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~l~~v~lElGGk~p~iV~~---dADl~~Aa~ 276 (506)
T 3rh9_A 200 LDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQVKKLALELGGNAPFIVFD---DADLEAAAD 276 (506)
T ss_dssp TTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTTTTTCEEEEECCCCCEEEECT---TSCHHHHHH
T ss_pred hCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhhhcCCceEEecCCCCceEECC---CCCHHHHHH
Confidence 9 99999999999 567899999998 99999999999999999999999999999999999999999 999999999
Q ss_pred HHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCce
Q 038617 238 RIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAI 315 (484)
Q Consensus 238 ~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~ 315 (484)
.+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++|+++.+ |+++
T Consensus 277 ~i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v 355 (506)
T 3rh9_A 277 NLIANKFR-GGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASL 355 (506)
T ss_dssp HHHHHHHG-GGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHH-hCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcccCCcccccCCHHHHHHHHHHHHHHHHCCCEE
Confidence 99999999 99999999999999999999999999999999999999 899999999999999999999999874 6799
Q ss_pred eeCCCc-CC-CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcc
Q 038617 316 VHGGLL-DK-ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGT 393 (484)
Q Consensus 316 ~~gg~~-~~-~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l 393 (484)
++||.. +. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++
T Consensus 356 ~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l 435 (506)
T 3rh9_A 356 VAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGL 435 (506)
T ss_dssp EESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHC
T ss_pred EecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhC
Confidence 999975 33 6999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecC
Q 038617 394 SSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSF 445 (484)
Q Consensus 394 ~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~ 445 (484)
++|+|+||+++. ..+.+||||+|.||+|+++|++|+++|++.|+|+++..
T Consensus 436 ~aG~V~vN~~~~--~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~~~ 485 (506)
T 3rh9_A 436 RFGHVGWNTGTG--PTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGFA 485 (506)
T ss_dssp CCSEEEESCCCC--CCTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC--
T ss_pred CcceEEEcCCCC--CCCCCCccCcCcCcCCcCccHHHHHHhcceEEEEEcCc
Confidence 999999999875 35789999999999999999999999999999988753
No 7
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=6.6e-97 Score=771.75 Aligned_cols=432 Identities=25% Similarity=0.372 Sum_probs=404.4
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..+++. |+..+++.+++++..
T Consensus 46 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~ 124 (484)
T 3ifg_A 46 KMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDDLALILTTEQGKPLAEAKG-EIAYAASFIEWFAEE 124 (484)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 4688999999999999999999999999999999999999999999999999999999999974 999999999999887
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+++.... .+....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..|++++.++
T Consensus 125 ~~~~~g~~---~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~a 201 (484)
T 3ifg_A 125 GKRVAGDT---LPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERA 201 (484)
T ss_dssp HTTCCEEE---ECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHH
T ss_pred HHhhcCcc---ccccCCCceeEEEecCCcEEEEECCCcChHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHh
Confidence 76543221 111112446788999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+|+|++|+++| +.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++.
T Consensus 202 GlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~iV~~---dADl~~Aa~~ 278 (484)
T 3ifg_A 202 GVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVKKLTLELGGNAPFIVFD---DADLDAAVEG 278 (484)
T ss_dssp TCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTGGGTCEEEEECCCCCEEEECT---TSCHHHHHHH
T ss_pred CCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhccCCceEEecCCCCeEEECC---CCCHHHHHHH
Confidence 99999999999 467899999998 99999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV 316 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~ 316 (484)
+++++|. |+||.|++++|||||+++||+|+++|+++++++++||| ++++++||++++.+++++.++|+++.+ |++++
T Consensus 279 i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~ 357 (484)
T 3ifg_A 279 AIASKYR-NNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLM 357 (484)
T ss_dssp HHHHHHG-GGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHh-cCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEE
Confidence 9999999 99999999999999999999999999999999999999 899999999999999999999999874 68999
Q ss_pred eCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccce
Q 038617 317 HGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS 395 (484)
Q Consensus 317 ~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~ 395 (484)
+||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++
T Consensus 358 ~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~a 437 (484)
T 3ifg_A 358 TGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEY 437 (484)
T ss_dssp ECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSEESEEEEECCBHHHHHHHHHHCCC
T ss_pred ECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCc
Confidence 999763 3799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 396 GSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 396 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
|+|+||+... ..+.+||||+|.||+|+++|.+|+++|++.|+|++.
T Consensus 438 G~v~iN~~~~--~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~~ 483 (484)
T 3ifg_A 438 GMVGINTGLI--SNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVA 483 (484)
T ss_dssp SEEEESCSCC--CCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEEE
T ss_pred ceEEEcCCCC--CCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEEe
Confidence 9999998643 468899999999999999999999999999998753
No 8
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=3.6e-96 Score=771.18 Aligned_cols=433 Identities=25% Similarity=0.383 Sum_probs=407.9
Q ss_pred CCCHHHHHHHHHHHHHHh--HhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTF--RSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL 79 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~--~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~ 79 (484)
.++.+|+++|+++|++|| +.|+.++.++|.++|++++++|++++++|++++++|+|||..+++. |+..+++.+++++
T Consensus 66 ~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a 144 (520)
T 3ed6_A 66 EGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESYA-DMDDIHNVFMYFA 144 (520)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHH
Confidence 478999999999999999 8999999999999999999999999999999999999999999985 9999999999999
Q ss_pred HHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617 80 SCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP 159 (484)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~ 159 (484)
...+++.+.. . +....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..|++++.
T Consensus 145 ~~~~~~~g~~-~--~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~ 221 (520)
T 3ed6_A 145 GLADKDGGEM-I--DSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELME 221 (520)
T ss_dssp HHTTSCCEEE-E--CCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHH
T ss_pred HHHHHhcCee-c--ccCCCCCcccccccCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHH
Confidence 8887654321 1 111124467889999999999999999999999999999999999999999999999999999999
Q ss_pred cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHH
Q 038617 160 LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTV 236 (484)
Q Consensus 160 ~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa 236 (484)
++ +|+|++|+++| +.++++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|+
T Consensus 222 eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~aa~~l~~v~lELGGk~p~IV~~---dADl~~Aa 298 (520)
T 3ed6_A 222 EVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELGGKNPNIIFD---DADFELAV 298 (520)
T ss_dssp HHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECT---TSCHHHHH
T ss_pred HhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhcCCCEEEEcCCCCeeEECC---CCCHHHHH
Confidence 99 99999999999 678999999998 99999999999999999999999999999999999999999 99999999
Q ss_pred HHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCc
Q 038617 237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADA 314 (484)
Q Consensus 237 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~ 314 (484)
+.+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++|+++.+ |++
T Consensus 299 ~~i~~~~f~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~ 377 (520)
T 3ed6_A 299 DQALNGGYF-HAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGAT 377 (520)
T ss_dssp HHHHHHHHG-GGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHh-cCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhCCCE
Confidence 999999999 99999999999999999999999999999999999999 899999999999999999999999874 679
Q ss_pred eeeCCCcC-----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 038617 315 IVHGGLLD-----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQI 389 (484)
Q Consensus 315 ~~~gg~~~-----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 389 (484)
+++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++
T Consensus 378 v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~ 457 (520)
T 3ed6_A 378 IAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRV 457 (520)
T ss_dssp EEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHH
T ss_pred EEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHH
Confidence 99999764 4699999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 390 VSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 390 ~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
++++++|+|+||+...+ .+.+||||+|.||+|+++|.+|+++|++.|+|+++.
T Consensus 458 a~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~~~~ 510 (520)
T 3ed6_A 458 ANKLKLGTVWINDFHPY--FAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILTNT 510 (520)
T ss_dssp HHHSCCSEEEESCSCCC--CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEES
T ss_pred HHHCCcceEEECCCCCC--CCCCCcCCcCcCcCCccchHHHHHHhhceEEEEEcC
Confidence 99999999999998764 688999999999999999999999999999998875
No 9
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=1.2e-96 Score=771.97 Aligned_cols=432 Identities=25% Similarity=0.384 Sum_probs=405.1
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+.+++++|.++|++++++|++++++|++++++|+|||..+++. |+..+++.+++++..
T Consensus 66 ~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~ 144 (504)
T 3ek1_A 66 SLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADDIALIMTSEQGKPLAEARG-EVLYAASFIEWFAEE 144 (504)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999999999975 999999999999887
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+++.... .+....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..|++++.++
T Consensus 145 ~~~~~g~~---~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~ea 221 (504)
T 3ek1_A 145 AKRVYGDT---IPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKA 221 (504)
T ss_dssp HTTCCEEE---ECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHT
T ss_pred HHHhcCcc---cccccccccceeeccCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh
Confidence 76543221 111112346788999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+|+|++|+++| +.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++.
T Consensus 222 GlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~IV~~---dADl~~Aa~~ 298 (504)
T 3ek1_A 222 GIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLELGGNAPFIVFD---DADLDAAVDG 298 (504)
T ss_dssp TCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCEEEEECT---TSCHHHHHHH
T ss_pred CCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCCeEecCCCCCeeEEcC---CCCHHHHHHH
Confidence 99999999998 567899999998 99999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV 316 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~ 316 (484)
+++++|. |+||.|++++|||||+++||+|+++|+++++++++||| ++++++||++++.+++++.++|+++.+ |++++
T Consensus 299 i~~~~f~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~ 377 (504)
T 3ek1_A 299 AMVSKYR-NAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLI 377 (504)
T ss_dssp HHHHHHG-GGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHh-cCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCccccCccccccCHHHHHHHHHHHHHHHHCCCEEE
Confidence 9999999 99999999999999999999999999999999999999 899999999999999999999999874 78999
Q ss_pred eCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcccee
Q 038617 317 HGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSG 396 (484)
Q Consensus 317 ~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g 396 (484)
+||.. .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|
T Consensus 378 ~gG~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG 456 (504)
T 3ek1_A 378 TGGKE-LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYG 456 (504)
T ss_dssp ECCCE-EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHSCCS
T ss_pred eCCcc-CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcC
Confidence 99975 46899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 397 SLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 397 ~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
+|+||+... ..+.+||||+|.||+|+++|.+|+++|++.|+|+++.
T Consensus 457 ~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~~ 502 (504)
T 3ek1_A 457 MVGHNTGLI--SNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSAY 502 (504)
T ss_dssp EEEESCSCC--CCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEEC
T ss_pred eEEECCCCC--CCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEec
Confidence 999998763 4688999999999999999999999999999998764
No 10
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=5.2e-96 Score=766.31 Aligned_cols=433 Identities=23% Similarity=0.357 Sum_probs=405.3
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.++++++.
T Consensus 56 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~ 135 (495)
T 1wnd_A 56 EASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGA 135 (495)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 47889999999999999999999999999999999999999999999999999999999999744999999999999988
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
++++.+.. . +....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|++++.++
T Consensus 136 ~~~~~g~~-~--~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea 212 (495)
T 1wnd_A 136 ARCLNGLA-A--GEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI 212 (495)
T ss_dssp TTCCEEEC-B--EEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT
T ss_pred HHHhcCcc-c--cCCCCCceeEEeeecCCeEEEECCCcchHHHHHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh
Confidence 87764321 1 11112335688999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617 162 LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI 239 (484)
Q Consensus 162 lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i 239 (484)
+|+|++|+++| +.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++.+
T Consensus 213 lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~l~~v~lELGGk~p~iV~~---dADl~~Aa~~i 289 (495)
T 1wnd_A 213 FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFD---DADIEAVVEGV 289 (495)
T ss_dssp SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECT---TSCHHHHHHHH
T ss_pred CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCccccccCCCCeEEECC---cCCHHHHHHHH
Confidence 99999999999 678899999998 99999999999999999999999999999999999999999 99999999999
Q ss_pred HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-C-Ccee
Q 038617 240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-A-DAIV 316 (484)
Q Consensus 240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~-~~~~ 316 (484)
++++|. |+||.|++++|||||++++|+|+++|+++++++++||| ++++++||++++.+++++.++++++.+ | ++++
T Consensus 290 ~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~ 368 (495)
T 1wnd_A 290 RTFGYY-NAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVI 368 (495)
T ss_dssp HHHTTG-GGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEE
T ss_pred HHHHHh-cCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEE
Confidence 999999 99999999999999999999999999999999999999 889999999999999999999999864 6 7899
Q ss_pred eCCC-cCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccce
Q 038617 317 HGGL-LDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS 395 (484)
Q Consensus 317 ~gg~-~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~ 395 (484)
+||. .++.|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++
T Consensus 369 ~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~a 448 (495)
T 1wnd_A 369 TGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQY 448 (495)
T ss_dssp ECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCS
T ss_pred ECCcccCCCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCc
Confidence 9997 544699999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 396 GSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 396 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
|+|+||+... ..+.+||||+|.||+|+++|.+|+++|++.|+|+.+
T Consensus 449 G~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~~~ 494 (495)
T 1wnd_A 449 GCTWVNTHFM--LVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 494 (495)
T ss_dssp SEEEESCCCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred ceEEECCCCC--CCCCCCCCCCCcCcCCccchHHHHHHhhCeEEEEec
Confidence 9999998654 468899999999999999999999999999998764
No 11
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=2e-95 Score=757.23 Aligned_cols=432 Identities=37% Similarity=0.642 Sum_probs=405.5
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++..|+..+++.++++++.
T Consensus 24 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~ 103 (457)
T 3lns_A 24 YLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAVLHEIDFALAH 103 (457)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999866999999999999999
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
+++|.+++.........+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|++++.++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~a 183 (457)
T 3lns_A 104 LDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEA 183 (457)
T ss_dssp HHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred HHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh
Confidence 99987654332222223456788999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccceeeccCChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHH
Q 038617 162 LDCKAIKVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIG 241 (484)
Q Consensus 162 lp~g~v~~v~g~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~ 241 (484)
+|+|++|+++|+.+.+++|++++||+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++.+++
T Consensus 184 lP~gvv~vv~g~~~~~~~L~~~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~~---dADl~~Aa~~i~~ 260 (457)
T 3lns_A 184 FAPEYVAVIQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLP---DADLDQTVNQLMF 260 (457)
T ss_dssp CCTTTEEECCCCHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCEEEEECT---TCCHHHHHHHHHH
T ss_pred CCHhhEEEecCCHHHHHHHhcCCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCCCCCeECC---CCCHHHHHHHHHH
Confidence 9999999999988899999986699999999999999999999999999999999999999999 9999999999999
Q ss_pred hhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCCCc
Q 038617 242 GKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGGLL 321 (484)
Q Consensus 242 ~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg~~ 321 (484)
++|. |+||.|++++|||||+++||+|+++|++++++++ |.+. ++||++++.+++++.++++++ ++++++||..
T Consensus 261 ~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~-~~gpli~~~~~~rv~~~i~~a--~~~~~~gg~~ 333 (457)
T 3lns_A 261 GKFI-NSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN-STGKLVTERQVQRLVSLLEAT--QGQVLVGSQA 333 (457)
T ss_dssp HHHG-GGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT-TTCCCSSHHHHHHHHHHHHHC--CSEEEECCCE
T ss_pred HHHH-hCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc-cccCCCCHHHHHHHHHHHHhc--CCeEEeCCcc
Confidence 9999 9999999999999999999999999999999987 5333 999999999999999999986 4689999976
Q ss_pred CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhc-CCCCceEEEecCCHHHHHHHhhccceeeEEE
Q 038617 322 DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINS-RPKPLAIYAFTKDETFKKQIVSGTSSGSLIF 400 (484)
Q Consensus 322 ~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~-~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~i 400 (484)
+.+|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+ ++|||++||||+|.++++++++++++|+|+|
T Consensus 334 ~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~v 413 (457)
T 3lns_A 334 DVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQV 413 (457)
T ss_dssp EGGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHHHHHHHTSCCSEEEE
T ss_pred CCCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHHHHHHHhCCcceEEE
Confidence 667999999999999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred CCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 401 NDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 401 N~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
|+++.+...+.+||||+|.||+|+++|.+|+++|++.|+|++.
T Consensus 414 N~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 414 NGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIV 456 (457)
T ss_dssp SCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred cCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence 9987655678999999999999999999999999999999764
No 12
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=4.9e-96 Score=769.59 Aligned_cols=435 Identities=23% Similarity=0.329 Sum_probs=405.5
Q ss_pred CCCHHHHHHHHHHHHHHhH--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFR--SGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL 79 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~ 79 (484)
.++.+|+++|+++|++||+ .|+.++.++|.++|++++++|++++++|++++++|+|||..+++..|+..+++.+++++
T Consensus 70 ~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a 149 (517)
T 2o2p_A 70 LAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFA 149 (517)
T ss_dssp CCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4789999999999999999 99999999999999999999999999999999999999999997459999999999999
Q ss_pred HHHHHhhcCccccCcc-ccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHh
Q 038617 80 SCLDKWMAPKKRRLPL-LFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI 158 (484)
Q Consensus 80 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l 158 (484)
...+++.+.. ..... .......+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..|++++
T Consensus 150 ~~~~~~~g~~-~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~ 228 (517)
T 2o2p_A 150 GWCDKIQGAT-IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELT 228 (517)
T ss_dssp HHGGGCCEEE-ECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHH
T ss_pred HHHHHhcCcc-ccccccCCCCceEEEEecCCccEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHH
Confidence 9887765432 11110 011224688999999999999999999999999999999999999999999999999999999
Q ss_pred ccc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHh-cccCceeeecCCcCceEEcCCCCCCCHHH
Q 038617 159 PLY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAA-KHLTPVTLELGGKCPAILDTLSSPLDIKV 234 (484)
Q Consensus 159 ~~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~-~~~~~~~lelgG~~p~iV~~~~~daDl~~ 234 (484)
.++ +|+|++|+|+| +.+.++.|++|+ ||+|+||||+.+|+.|++.++ +++||+++|||||||+||++ |||++.
T Consensus 229 ~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~aa~~~lk~v~lELGGk~p~IV~~---dADl~~ 305 (517)
T 2o2p_A 229 LKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFA---DCDLNK 305 (517)
T ss_dssp HHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHTCCEEEEECCCCEEEEECT---TSCHHH
T ss_pred HHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhHHhcCCeEEEECCCcCeEEECC---CCCHHH
Confidence 999 99999999999 557899999997 999999999999999999999 99999999999999999999 999999
Q ss_pred HHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-C
Q 038617 235 TVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-A 312 (484)
Q Consensus 235 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~ 312 (484)
|++.+++++|. |+||.|++++|||||+++||+|+++|+++++++++||| ++++++||++++.+++++.++|+++.+ |
T Consensus 306 Aa~~i~~~~f~-n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~G 384 (517)
T 2o2p_A 306 AVQMGMSSVFF-NKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEG 384 (517)
T ss_dssp HHHHHHHHHHG-GGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHh-cCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCC
Confidence 99999999999 99999999999999999999999999999999999999 889999999999999999999999864 6
Q ss_pred CceeeCCCcCC-CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCC--HHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 038617 313 DAIVHGGLLDK-ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNN--IQESIEFINSRPKPLAIYAFTKDETFKKQI 389 (484)
Q Consensus 313 ~~~~~gg~~~~-~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~--~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 389 (484)
+++++||..+. .|+|++|||+.+++++|++++||+||||++|++|+| +||||+++|+++|||++||||+|.++++++
T Consensus 385 a~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~ 464 (517)
T 2o2p_A 385 ATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYV 464 (517)
T ss_dssp CEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBHHHHHHH
T ss_pred CEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCHHHHHHH
Confidence 89999997643 699999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred hhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 390 VSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 390 ~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
++++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|+|+.+
T Consensus 465 ~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k~v~~~ 516 (517)
T 2o2p_A 465 SDKLQAGTVFINTYNK--TDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTFE 516 (517)
T ss_dssp HHHCCSSEEEESCSSC--CCTTSCBCCCGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred HHhcCEeEEEECCCCC--CCCCCCcCCcCcCCcCccChHHHHHHhCCceEEEee
Confidence 9999999999998754 467899999999999999999999999999999764
No 13
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.1e-95 Score=768.84 Aligned_cols=434 Identities=27% Similarity=0.376 Sum_probs=408.5
Q ss_pred CCCHHHHHHHHHHHHHHh--HhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTF--RSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL 79 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~--~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~ 79 (484)
.++.+|+++|+++|++|| ..|+.++.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++.+++++
T Consensus 57 ~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a 135 (528)
T 3u4j_A 57 EASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILARQEELALIESLEVGKPIAQAR-GEIGFCADLWSYAA 135 (528)
T ss_dssp CCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHH
Confidence 478999999999999999 789999999999999999999999999999999999999999994 69999999999999
Q ss_pred HHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617 80 SCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP 159 (484)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~ 159 (484)
+.++++.... . +....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..|++++.
T Consensus 136 ~~~~~~~~~~-~--~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ 212 (528)
T 3u4j_A 136 GQARALEGQT-H--NNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAR 212 (528)
T ss_dssp HHHTTCCEEE-E--CCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHH
T ss_pred HHHHHhcCee-e--ccCCCCceeEEEeccceEEEEECCCccHHHHHHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHH
Confidence 9988764321 1 111134467889999999999999999999999999999999999999999999999999999999
Q ss_pred cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHH
Q 038617 160 LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTV 236 (484)
Q Consensus 160 ~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa 236 (484)
++ +|+|++|+|+| +.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|+
T Consensus 213 eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~---dADl~~Aa 289 (528)
T 3u4j_A 213 EAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAARTVKRVGLELGGKGPQIVFA---DADLDAAA 289 (528)
T ss_dssp HHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEECT---TSCHHHHH
T ss_pred HhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHHhcCCceEEecCCCCeeEECC---CCCHHHHH
Confidence 99 99999999999 678999999998 99999999999999999999999999999999999999999 99999999
Q ss_pred HHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCc
Q 038617 237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADA 314 (484)
Q Consensus 237 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~ 314 (484)
+.+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ |++
T Consensus 290 ~~i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~ 368 (528)
T 3u4j_A 290 DGIAYGVYH-NAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAE 368 (528)
T ss_dssp HHHHHHHHG-GGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHhh-cCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHHHCCCE
Confidence 999999999 99999999999999999999999999999999999999 889999999999999999999999874 679
Q ss_pred eeeCCCcCC--CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617 315 IVHGGLLDK--ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG 392 (484)
Q Consensus 315 ~~~gg~~~~--~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~ 392 (484)
+++||..+. +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++
T Consensus 369 v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~ 448 (528)
T 3u4j_A 369 LLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRR 448 (528)
T ss_dssp EEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHH
T ss_pred EEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHh
Confidence 999997643 799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecC
Q 038617 393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSF 445 (484)
Q Consensus 393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~ 445 (484)
+++|+|+||+... ..+.+||||+|.||+|+++|.+|+++|++.|+|+++..
T Consensus 449 l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~ 499 (528)
T 3u4j_A 449 IRAGRCWINSVID--GTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVTLG 499 (528)
T ss_dssp SCCSEEEESCCSC--CCTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEEESS
T ss_pred CCeeEEEECCCCC--CCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEeCC
Confidence 9999999999765 47889999999999999999999999999999988753
No 14
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=1.2e-95 Score=770.23 Aligned_cols=435 Identities=23% Similarity=0.324 Sum_probs=407.6
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.+++++..
T Consensus 70 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~ 148 (538)
T 3qan_A 70 KANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEADA-DTAEAIDFLEYYARQ 148 (538)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 4688999999999999999999999999999999999999999999999999999999999986 999999999999998
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
+..+..++.... ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..|++++.++
T Consensus 149 ~~~~~~~~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~ea 225 (538)
T 3qan_A 149 MIELNRGKEILS---RPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDA 225 (538)
T ss_dssp HHHHHTCBCCCC---CTTEEEEEEEEECCEEEEECCSTTTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHT
T ss_pred HHHhcCCeeecc---cCCcceeeecCCCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHh
Confidence 555555443221 12456788999999999999999999999999999999999999999999999999999999998
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcc------cCceeeecCCcCceEEcCCCCCCCH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKH------LTPVTLELGGKCPAILDTLSSPLDI 232 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~------~~~~~lelgG~~p~iV~~~~~daDl 232 (484)
+|+|++|+++| +.+.++.|++|+ ||+|+||||+.+|+.|++.++++ +||+++|||||||+||++ |||+
T Consensus 226 GlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~lkpv~lELGGk~p~IV~~---dADl 302 (538)
T 3qan_A 226 GLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDR---DADL 302 (538)
T ss_dssp TCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCCEEEECT---TSCH
T ss_pred CCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccccccccccEEEecCCCCceEECC---CCCH
Confidence 99999999999 667899999997 99999999999999999999988 999999999999999999 9999
Q ss_pred HHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc
Q 038617 233 KVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV 311 (484)
Q Consensus 233 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~ 311 (484)
+.|++.+++++|. |+||.|++++|||||+++||+|+++|+++++++++||| ++++++||++++.+++++.++|+++.+
T Consensus 303 ~~Aa~~i~~~~f~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~ 381 (538)
T 3qan_A 303 DLAAESILVSAFG-FSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKK 381 (538)
T ss_dssp HHHHHHHHHHHHG-GGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-cCCCCCccCceeEEehHHHHHHHHHHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHH
Confidence 9999999999999 99999999999999999999999999999999999999 899999999999999999999999875
Q ss_pred CCceeeCCCcCC-CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHh
Q 038617 312 ADAIVHGGLLDK-ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIV 390 (484)
Q Consensus 312 ~~~~~~gg~~~~-~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 390 (484)
.+++++||..+. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++
T Consensus 382 ~G~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~ 461 (538)
T 3qan_A 382 EGRLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAK 461 (538)
T ss_dssp HSEEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHH
T ss_pred CCeEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHH
Confidence 349999997643 7999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccceeeEEECCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEec
Q 038617 391 SGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIG-RYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 391 ~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~~ 444 (484)
+++++|+|+||+...+...+.+||||+|.||+| +++|.+|+++|++.|+|+.+.
T Consensus 462 ~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft~~k~v~~~~ 516 (538)
T 3qan_A 462 REFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTVSEMY 516 (538)
T ss_dssp HHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGGEEEEEEEEEC
T ss_pred HhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHhhCeEEEEEec
Confidence 999999999995443334789999999999999 999999999999999998875
No 15
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=2.6e-95 Score=761.41 Aligned_cols=428 Identities=24% Similarity=0.368 Sum_probs=400.9
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+.+++++|.++|++++++|+++.++|++++++|+|||..+++..|+..+++.++++++.
T Consensus 59 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~ 138 (497)
T 3i44_A 59 LGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKA 138 (497)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999855999999999999988
Q ss_pred HHHhhcCccccCccccCCCcceEE-eecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhcc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVV-SEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPL 160 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~-~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~ 160 (484)
+..+..+... ..+...+++ ++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..|++++.+
T Consensus 139 ~~~~~~~~~~-----~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~e 213 (497)
T 3i44_A 139 YKEFSFQEAL-----IEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDE 213 (497)
T ss_dssp HHHCCSEEES-----STTCSSCEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHH
T ss_pred hhcccccccc-----cCCceeEEEeecCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHH
Confidence 7765332110 113446777 9999999999999999999999999999999999999999999999999999999
Q ss_pred c-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHH
Q 038617 161 Y-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVK 237 (484)
Q Consensus 161 a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~ 237 (484)
+ +|+|++|+++| +.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|||||||+||++ ||| +.|++
T Consensus 214 aGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~---dAD-~~Aa~ 289 (497)
T 3i44_A 214 AALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASNTLKRVCLELGGKGANIIFA---DAD-IDALQ 289 (497)
T ss_dssp TTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECT---TSC-TTHHH
T ss_pred hCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCceeeccCCCCceEECC---Chh-HHHHH
Confidence 9 99999999999 668999999998 99999999999999999999999999999999999999999 999 99999
Q ss_pred HHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCce
Q 038617 238 RIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAI 315 (484)
Q Consensus 238 ~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~ 315 (484)
.+++++|. |+||.|++++|||||+++||+|+++|+++++++++||| ++++++||++++.+++++.++|+++.+ |+++
T Consensus 290 ~i~~~~f~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v 368 (497)
T 3i44_A 290 RGVRHCFY-NSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATL 368 (497)
T ss_dssp HHHHHHHG-GGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHh-cCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEE
Confidence 99999999 99999999999999999999999999999999999999 889999999999999999999999864 7899
Q ss_pred eeCCC-cC---CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh
Q 038617 316 VHGGL-LD---KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS 391 (484)
Q Consensus 316 ~~gg~-~~---~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~ 391 (484)
++||. .+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++
T Consensus 369 ~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~ 448 (497)
T 3i44_A 369 VTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAA 448 (497)
T ss_dssp EECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHH
T ss_pred EECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHH
Confidence 99994 33 269999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEE
Q 038617 392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQ 442 (484)
Q Consensus 392 ~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~ 442 (484)
++++|+|+||. . ...+.+||||+|.||+|+++|.+|+++|++.|+|+.
T Consensus 449 ~l~aG~V~iN~-~--~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~ 496 (497)
T 3i44_A 449 QVRSGMVEVNG-H--ELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAISY 496 (497)
T ss_dssp HSCCSEEEETT-C--CCCTTCCBCCSGGGCCCCBSHHHHHHTTEEEEEESC
T ss_pred hCCcCeEEECC-C--CCCCCCCcCCcCcCcCCccchHHHHHHhcceeEEEe
Confidence 99999999994 2 246789999999999999999999999999999853
No 16
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=1.6e-95 Score=764.66 Aligned_cols=433 Identities=23% Similarity=0.352 Sum_probs=406.5
Q ss_pred CCCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHH
Q 038617 1 MAAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALS 80 (484)
Q Consensus 1 ~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~ 80 (484)
+.++.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++.+++++.
T Consensus 53 ~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~ 131 (503)
T 1a4s_A 53 VPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAE-YDIDAAWQCIEYYAG 131 (503)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHH
T ss_pred eCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999999999999999999999999999999996 499999999999999
Q ss_pred HHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhcc
Q 038617 81 CLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPL 160 (484)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~ 160 (484)
..+++.+. ..... .+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..|++++.+
T Consensus 132 ~~~~~~g~-~~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~ 207 (503)
T 1a4s_A 132 LAPTLSGQ-HIQLP---GGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHE 207 (503)
T ss_dssp HGGGCCEE-EEECG---GGCEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHH
T ss_pred HHHHhcCC-cccCC---CCceeEEEEecCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH
Confidence 88876542 11111 234568899999999999999999999999999999999999999999999999999999999
Q ss_pred c-cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 161 Y-LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 161 a-lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+ +|+|++|+++|+.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++.
T Consensus 208 aGlP~gvv~vv~g~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~~~v~lELGGk~p~IV~~---dADl~~Aa~~ 284 (503)
T 1a4s_A 208 AGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFK---DCELENAVRG 284 (503)
T ss_dssp TTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECT---TSCHHHHHHH
T ss_pred hCCCcCeEEEEecCchHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCceEEecCCcCeEEECC---CCCHHHHHHH
Confidence 9 99999999999338899999998 99999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV 316 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~ 316 (484)
+++++|. |+||.|++++|||||+++||+|+++|+++++++++||| ++++++||++++.+++++.++++++.+ |++++
T Consensus 285 i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~ 363 (503)
T 1a4s_A 285 ALMANFL-TQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVL 363 (503)
T ss_dssp HHHTTCG-GGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHh-cCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEE
Confidence 9999999 99999999999999999999999999999999999999 889999999999999999999999864 77999
Q ss_pred eCCCcC-------CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 038617 317 HGGLLD-------KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQI 389 (484)
Q Consensus 317 ~gg~~~-------~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 389 (484)
+||..+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++
T Consensus 364 ~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~ 443 (503)
T 1a4s_A 364 CGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRV 443 (503)
T ss_dssp ECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHH
T ss_pred eCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCCHHHHHHHHhcCCCCceEEEECCCHHHHHHH
Confidence 999754 3589999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 390 VSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 390 ~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|+.+.
T Consensus 444 ~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~ 496 (503)
T 1a4s_A 444 AANLEAGTCYINTYSI--SPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEM 496 (503)
T ss_dssp HHHSCSSEEEESCCCC--CCTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEECC
T ss_pred HHHCceeEEEECCCCC--CCCCCCCCCcCCCCCCccchHHHHHHhcCceEEEEcc
Confidence 9999999999998765 4678999999999999999999999999999998764
No 17
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=1.5e-95 Score=763.98 Aligned_cols=432 Identities=26% Similarity=0.364 Sum_probs=406.5
Q ss_pred CCCHHHHHHHHHHHHHHhH---hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFR---SGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYA 78 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~ 78 (484)
.++.+|+++|+++|++||+ .|+.++.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.++++
T Consensus 54 ~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~ 133 (501)
T 1bxs_A 54 EGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYC 133 (501)
T ss_dssp CCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Confidence 4788999999999999999 8999999999999999999999999999999999999999988667999999999999
Q ss_pred HHHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHh
Q 038617 79 LSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI 158 (484)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l 158 (484)
++.++++.+... .. ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..|++++
T Consensus 134 a~~~~~~~g~~~-~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~ 209 (501)
T 1bxs_A 134 AGWADKIQGRTI-PM---DGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLI 209 (501)
T ss_dssp HHHGGGCCEEEE-CC---SSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHH
T ss_pred HHHHHHhhCCee-ec---cCCcceeEEecCCceEEEECCCcchHHHHHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHH
Confidence 999888755321 11 22335688999999999999999999999999999999999999999999999999999999
Q ss_pred ccc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHh-cccCceeeecCCcCceEEcCCCCCCCHHH
Q 038617 159 PLY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAA-KHLTPVTLELGGKCPAILDTLSSPLDIKV 234 (484)
Q Consensus 159 ~~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~-~~~~~~~lelgG~~p~iV~~~~~daDl~~ 234 (484)
.++ +|+|++|+|+| +.+.++.|++|+ ||+|+||||+.+|+.|++.++ +++||+++|+|||||+||++ |||++.
T Consensus 210 ~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~l~~v~lELGGk~p~iV~~---dADl~~ 286 (501)
T 1bxs_A 210 KEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFA---DADLDN 286 (501)
T ss_dssp HHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECT---TSCHHH
T ss_pred HHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccCCcEEEecCCcCeEEECC---CCCHHH
Confidence 999 99999999999 678899999998 999999999999999999999 99999999999999999999 999999
Q ss_pred HHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-C
Q 038617 235 TVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-A 312 (484)
Q Consensus 235 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~ 312 (484)
|++.+++++|. |+||.|++++|||||+++||+|+++|+++++++++||| ++++++||++++.+++++.++|+++.+ |
T Consensus 287 Aa~~i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G 365 (501)
T 1bxs_A 287 AVEFAHQGVFY-HQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEG 365 (501)
T ss_dssp HHHHHHHHHHT-TTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHh-cCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCC
Confidence 99999999999 99999999999999999999999999999999999999 889999999999999999999999864 6
Q ss_pred CceeeCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh
Q 038617 313 DAIVHGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS 391 (484)
Q Consensus 313 ~~~~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~ 391 (484)
+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++
T Consensus 366 a~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~ 445 (501)
T 1bxs_A 366 AKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSS 445 (501)
T ss_dssp CEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHH
T ss_pred CEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhcCCCCeeEEEEcCCHHHHHHHHH
Confidence 7899998753 369999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 392 ~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|+.+
T Consensus 446 ~l~aG~V~iN~~~~--~~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~~ 495 (501)
T 1bxs_A 446 ALQSGTVWVNCYSV--VSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIK 495 (501)
T ss_dssp HSCCSEEEESCCCC--CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred hcCeeEEEECCCCC--CCCCCCCCCcCcCCcCccchHHHHHHhhCeeEEEEc
Confidence 99999999998754 357899999999999999999999999999999876
No 18
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=7.6e-96 Score=766.76 Aligned_cols=433 Identities=24% Similarity=0.351 Sum_probs=406.7
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..+++ .|+..+++.+++++..
T Consensus 46 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~ 124 (497)
T 3k2w_A 46 AGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSVAE-MEVDVTATFIDYGCDN 124 (497)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999998 4999999999999988
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
++++.+... +....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..|++++.++
T Consensus 125 ~~~~~~~~~---~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~a 201 (497)
T 3k2w_A 125 ALTIEGDIL---PSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEA 201 (497)
T ss_dssp TTTCCEEEE---ECSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHT
T ss_pred HHHhcCccc---ccCCCCcceeEEEcCCceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh
Confidence 877654321 11123446788999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+|+|++|+|+| +.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++.
T Consensus 202 GlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~~---dADl~~Aa~~ 278 (497)
T 3k2w_A 202 GLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLELGGKAPMVVMD---DADLDKAAED 278 (497)
T ss_dssp TCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHHHTTTTCCEEEECCCCEEEEECT---TCCHHHHHHH
T ss_pred CcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhhcCCCeEEEcCCCCceEEcC---CCCHHHHHHH
Confidence 99999999999 668999999998 99999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV 316 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~ 316 (484)
+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ |++++
T Consensus 279 i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~ 357 (497)
T 3k2w_A 279 ALWGRFA-NCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVA 357 (497)
T ss_dssp HHHHHHG-GGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEE
T ss_pred HHHHHHh-CCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEE
Confidence 9999999 99999999999999999999999999999999999999 889999999999999999999999864 78999
Q ss_pred eCCCc--C-C--CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh
Q 038617 317 HGGLL--D-K--ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS 391 (484)
Q Consensus 317 ~gg~~--~-~--~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~ 391 (484)
+||.. . . +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++
T Consensus 358 ~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~ 437 (497)
T 3k2w_A 358 TGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAIS 437 (497)
T ss_dssp ECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHH
T ss_pred ecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHH
Confidence 99973 2 2 68999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 392 ~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
++++|+|+||+++.+ .+.+||||+|.||+|+++|++|+++|++.|+|+.+.
T Consensus 438 ~l~aG~v~vN~~~~~--~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~ 488 (497)
T 3k2w_A 438 DLEVGEVYINRGMGE--QHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVYINE 488 (497)
T ss_dssp HCCSSEEEESCCSCC--CTTSCBCCEETSEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred hCCeeEEEEcCCCCC--CCCCCcCCcCCCcCCccchHHHHHHhcceEEEEEEc
Confidence 999999999998764 588999999999999999999999999999998875
No 19
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=9.8e-96 Score=765.11 Aligned_cols=432 Identities=24% Similarity=0.353 Sum_probs=406.4
Q ss_pred CCCHHHHHHHHHHHHHHhH---hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFR---SGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYA 78 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~ 78 (484)
.++.+|+++|+++|++||+ .|+.++.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.++++
T Consensus 53 ~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~ 132 (500)
T 1o04_A 53 EGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 132 (500)
T ss_dssp CBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 4688999999999999999 8999999999999999999999999999999999999999988666999999999999
Q ss_pred HHHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHh
Q 038617 79 LSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI 158 (484)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l 158 (484)
++.++++.++.. . . ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..|++++
T Consensus 133 a~~~~~~~g~~~-~--~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~ 208 (500)
T 1o04_A 133 AGWADKYHGKTI-P--I-DGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLI 208 (500)
T ss_dssp HHHTTTCCEEEE-C--C-SSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHH
T ss_pred HHHHHHhhCcce-e--c-CCCceEEEEEecCCcEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHH
Confidence 998887754321 1 1 12335688999999999999999999999999999999999999999999999999999999
Q ss_pred ccc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHh-cccCceeeecCCcCceEEcCCCCCCCHHH
Q 038617 159 PLY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAA-KHLTPVTLELGGKCPAILDTLSSPLDIKV 234 (484)
Q Consensus 159 ~~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~-~~~~~~~lelgG~~p~iV~~~~~daDl~~ 234 (484)
.++ +|+|++|+++| +.+.++.|++|+ ||+|+||||+.+|+.|++.++ +++||+++|+|||||+||++ |||++.
T Consensus 209 ~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~l~pv~lELGGk~p~iV~~---dADl~~ 285 (500)
T 1o04_A 209 KEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMS---DADMDW 285 (500)
T ss_dssp HHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCEEEEECT---TSCHHH
T ss_pred HHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCceEEEEcCCcCeEEECC---CCCHHH
Confidence 999 99999999999 678899999998 999999999999999999999 99999999999999999999 999999
Q ss_pred HHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-C
Q 038617 235 TVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-A 312 (484)
Q Consensus 235 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~ 312 (484)
|++.+++++|. |+||.|++++|||||+++||+|+++|+++++++++||| ++++++||++++.+++++.++++++.+ |
T Consensus 286 Aa~~i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G 364 (500)
T 1o04_A 286 AVEQAHFALFF-NQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEG 364 (500)
T ss_dssp HHHHHHHHHHG-GGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhc-cCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccCccCcccCHHHHHHHHHHHHHHHhCC
Confidence 99999999999 99999999999999999999999999999999999999 889999999999999999999999864 6
Q ss_pred CceeeCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh
Q 038617 313 DAIVHGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS 391 (484)
Q Consensus 313 ~~~~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~ 391 (484)
+++++||..+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++
T Consensus 365 a~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~ 444 (500)
T 1o04_A 365 AKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQ 444 (500)
T ss_dssp CEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHH
T ss_pred CEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHH
Confidence 7899999764 369999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 392 ~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|+.+
T Consensus 445 ~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~~ 494 (500)
T 1o04_A 445 ALQAGTVWVNCYDV--FGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVK 494 (500)
T ss_dssp HCCSSEEEESCSSC--CCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEE
T ss_pred hCCeeEEEECCCCC--CCCCCCCCCcCCCCCCccchHHHHHHhcceEEEEEe
Confidence 99999999998764 357899999999999999999999999999999876
No 20
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=6.8e-96 Score=768.52 Aligned_cols=433 Identities=27% Similarity=0.331 Sum_probs=404.8
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..++ |+..+++.+++++..
T Consensus 48 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~ 124 (517)
T 3r31_A 48 AATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERNDALSTLETLDTGKPIQET---IVADPTSGADAFEFF 124 (517)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999988 999999999999988
Q ss_pred HHH---hhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHh
Q 038617 82 LDK---WMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI 158 (484)
Q Consensus 82 ~~~---~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l 158 (484)
.+. +..+..... ..+. .+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|++++
T Consensus 125 ~~~~~~~~~g~~~~~---~~~~-~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll 200 (517)
T 3r31_A 125 GGIAPSALNGDYIPL---GGDF-AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEIL 200 (517)
T ss_dssp HHHHHHHTCCCEEEC---SSSE-EEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHH
T ss_pred hhhccccccCccccc---CCCc-ceEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHH
Confidence 876 233322111 1233 788999999999999999999999999999999999999999999999999999999
Q ss_pred ccc-cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHH
Q 038617 159 PLY-LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTV 236 (484)
Q Consensus 159 ~~a-lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa 236 (484)
.++ +|+|++|+++|+.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|+
T Consensus 201 ~eaGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~lk~v~lElGGk~p~IV~~---dADl~~Aa 277 (517)
T 3r31_A 201 IEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIVFD---DADIESAV 277 (517)
T ss_dssp HHTTCCTTSEEECCCCTTHHHHHHTCTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECT---TSCHHHHH
T ss_pred HHhCcCcccEEEEECCHHHHHHHHhCCCcCEEeccCCHHHHHHHHHHhhcCCCcEEEEcCCcCeEEEec---CCCHHHHH
Confidence 999 99999999999888999999998 99999999999999999999999999999999999999999 99999999
Q ss_pred HHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCc
Q 038617 237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADA 314 (484)
Q Consensus 237 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~ 314 (484)
+.+++++|. |+||.|++++|||||+++||+|+++|+++++++++||| ++++++||++++.+++++.++|+++.+ |++
T Consensus 278 ~~i~~~~f~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~ 356 (517)
T 3r31_A 278 GGAMLGNFY-SSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGAT 356 (517)
T ss_dssp HHHHHHHTS-CCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCE
T ss_pred HHHHHHHhc-CCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCE
Confidence 999999999 99999999999999999999999999999999999999 889999999999999999999999874 789
Q ss_pred eeeCCC-cC---CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHh
Q 038617 315 IVHGGL-LD---KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIV 390 (484)
Q Consensus 315 ~~~gg~-~~---~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 390 (484)
+++||. .+ .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++
T Consensus 357 v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~ 436 (517)
T 3r31_A 357 LITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVV 436 (517)
T ss_dssp EEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHH
T ss_pred EEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHH
Confidence 999993 11 36999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecCcC
Q 038617 391 SGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSFFL 447 (484)
Q Consensus 391 ~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~~ 447 (484)
+++++|+|+||+... ..+.+||||+|.||+|+++|++|+++|++.|+|+.+....
T Consensus 437 ~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~~~ 491 (517)
T 3r31_A 437 DGLEAGTLWINTYNL--CPVEIPFGGSKQSGFGRENSAAALEHYSELKTVYVSTGKV 491 (517)
T ss_dssp HHSCCSEEEESSCCC--CCTTSCBCCEETTEECCBSTGGGGGGSEEEEEEEECCC--
T ss_pred HHCCcceEEECCCCC--CCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEcCCCC
Confidence 999999999999764 4789999999999999999999999999999998876443
No 21
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.8e-95 Score=762.97 Aligned_cols=431 Identities=27% Similarity=0.354 Sum_probs=405.4
Q ss_pred CCCHHHHHHHHHHHHHHhH--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFR--SGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYAL 79 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~ 79 (484)
.++.+|+++|+++|++||+ .|+.++.++|.++|++++++|++++++|++++++|+|||..+++..|+..+++.+++++
T Consensus 42 ~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a 121 (495)
T 3b4w_A 42 MAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFA 121 (495)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4788999999999999999 99999999999999999999999999999999999999999997459999999999999
Q ss_pred HHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc
Q 038617 80 SCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP 159 (484)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~ 159 (484)
+.++++.+.. . +. ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|++++.
T Consensus 122 ~~~~~~~g~~-~--~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~ 197 (495)
T 3b4w_A 122 GAADKVTWTE-T--RT-GSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFA 197 (495)
T ss_dssp TCGGGSCSEE-E--EE-ETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECBTTSCHHHHHHHHHHH
T ss_pred HHHHHhcCCc-c--cC-CCCceEEEEEccCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEecCCccHHHHHHHHHHHH
Confidence 8887765432 1 11 122356889999999999999999999999999999999999999999999999999999999
Q ss_pred cc-cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHH
Q 038617 160 LY-LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVK 237 (484)
Q Consensus 160 ~a-lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~ 237 (484)
++ +|+|++|+++|+.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|||||||+||++ |||++.|++
T Consensus 198 eaGlP~gvv~vv~g~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~l~pv~lELGGk~p~iV~~---dADl~~Aa~ 274 (495)
T 3b4w_A 198 EVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEMLKPCTLELGGKSAAIILE---DVDLAAAIP 274 (495)
T ss_dssp HTTCCTTSEEECCBSHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEECT---TCCHHHHHH
T ss_pred HhCCCcCeEEEEeCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCceeecCCCcceEEECC---CCCHHHHHH
Confidence 99 99999999999778899999997 99999999999999999999999999999999999999999 999999999
Q ss_pred HHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCce
Q 038617 238 RIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAI 315 (484)
Q Consensus 238 ~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~ 315 (484)
.+++++|. |+||.|++++|||||+++||+|+++|+++++++++||| ++++++||++++.+++++.++++++.+ |+++
T Consensus 275 ~i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~ 353 (495)
T 3b4w_A 275 MMVFSGVM-NAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARL 353 (495)
T ss_dssp HHHHHHHG-GGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHhh-cCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHHhCCCEE
Confidence 99999999 99999999999999999999999999999999999999 889999999999999999999999864 6789
Q ss_pred eeCCCcCC---CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617 316 VHGGLLDK---ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG 392 (484)
Q Consensus 316 ~~gg~~~~---~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~ 392 (484)
++||..+. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++
T Consensus 354 ~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~ 433 (495)
T 3b4w_A 354 VCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQ 433 (495)
T ss_dssp EECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCCEEECSCHHHHHHHHHH
T ss_pred EecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHh
Confidence 99997643 589999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
+++|+|+||++. ..+.+||||+|.||+|+++|.+|+++|++.|+|+.+
T Consensus 434 l~aG~V~iN~~~---~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~~~ 481 (495)
T 3b4w_A 434 IRTGTYGINWYA---FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLP 481 (495)
T ss_dssp SCCSCCEESSCC---CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEECC
T ss_pred CCEeEEEECCCC---CCCCCCCCCCCCCCcCccchHHHHHHhcceeEEEEc
Confidence 999999999864 367899999999999999999999999999999875
No 22
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=3.6e-95 Score=761.73 Aligned_cols=432 Identities=25% Similarity=0.372 Sum_probs=404.0
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..+++. |+..+++.+++++..
T Consensus 45 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~ 123 (505)
T 3prl_A 45 ALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAIG-EVSRTADIIRHTADE 123 (505)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999999999985 999999999999999
Q ss_pred HHHhhcCccccCccccC---CCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHh
Q 038617 82 LDKWMAPKKRRLPLLFF---PASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI 158 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~---~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l 158 (484)
.+++.+... ....... +...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..|++++
T Consensus 124 ~~~~~g~~~-~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll 202 (505)
T 3prl_A 124 ALRLNGETL-KGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEAL 202 (505)
T ss_dssp HHTCCEEEE-EGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHH
T ss_pred HHHhcCccc-cccccccccCCceeEEEEcCCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHH
Confidence 887654321 1110010 235688999999999999999999999999999999999999999999999999999999
Q ss_pred ccc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617 159 PLY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVT 235 (484)
Q Consensus 159 ~~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~a 235 (484)
.++ +|+|++|+++| +.+.++.|++|+ ||+|+||||+.+|+.|++.++ +||+++|+|||||+||++ |||++.|
T Consensus 203 ~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~~v~lELGGk~p~iV~~---dADl~~A 277 (505)
T 3prl_A 203 ADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKAK--MIPVVLELGGKDPAIVLD---DADLKLT 277 (505)
T ss_dssp HHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHCC--SSCEEEECCCCEEEEECT---TCCHHHH
T ss_pred HHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHcc--CCcEEEECCCCCCCccCC---CCCHHHH
Confidence 998 99999999999 568899999997 999999999999999999887 899999999999999999 9999999
Q ss_pred HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhc-CCc
Q 038617 236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLV-ADA 314 (484)
Q Consensus 236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~ 314 (484)
++.+++++|. |+||.|++++|||||+++||+|+++|+++++++++|||.+++++||++++.+++++.++++++.+ |++
T Consensus 278 a~~i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~ 356 (505)
T 3prl_A 278 ASQIVSGAFS-YSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSPEDDADITPVIDEKSAAFIQGLIDDALENGAT 356 (505)
T ss_dssp HHHHHHHHHG-GGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTTTCSBCCCSCHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHh-cCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCCCCCcCcCCcccCHHHHHHHHHHHHHHHHCCCE
Confidence 9999999999 99999999999999999999999999999999999998878899999999999999999999874 679
Q ss_pred eeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccc
Q 038617 315 IVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTS 394 (484)
Q Consensus 315 ~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~ 394 (484)
+++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++++
T Consensus 357 v~~gG~~--~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~ 434 (505)
T 3prl_A 357 LLSGNKR--QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLE 434 (505)
T ss_dssp EEECCCE--ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSC
T ss_pred EEecCCC--CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCC
Confidence 9999974 68999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 395 SGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 395 ~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
+|+|+||+++.+ ..+.+||||+|.||+|+++|.+|+++|++.|+|+++.
T Consensus 435 aG~V~iN~~~~~-~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v~~~~ 483 (505)
T 3prl_A 435 VGTVHINAKTER-GPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTVLNL 483 (505)
T ss_dssp SSEEEESSCCCS-CSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred eeEEEEcCCCCC-CCCCCCcCCcCcCCCCcCccHHHHHHhhceEEEEEeC
Confidence 999999998653 4688999999999999999999999999999998875
No 23
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=2e-95 Score=765.71 Aligned_cols=434 Identities=20% Similarity=0.255 Sum_probs=404.7
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..+++. |+..+++.+++++..
T Consensus 60 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~ 138 (521)
T 4e4g_A 60 LASDADLAAAVESAKAAQPKWAATNPQRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDDAKG-DIVRGLEVCEFVIGI 138 (521)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCHHHHHH-HHHHHHHHHHHHHTH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999999999974 999999999999876
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+.. .+... .....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|++++.++
T Consensus 139 ~~~~-~~~~~--~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~ea 215 (521)
T 4e4g_A 139 PHLQ-KSEFT--EGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEA 215 (521)
T ss_dssp HHHT-CEEEE--EEEETTEEEEEEEEECCEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHT
T ss_pred HHHh-cCccc--ccCCCCcceeEEEcCCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHh
Confidence 5443 22211 11122345788999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617 162 -LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI 239 (484)
Q Consensus 162 -lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i 239 (484)
+|+|++|+++|+.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|||||||+||++ |||++.|++.+
T Consensus 216 GlP~gvv~vv~g~~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~IV~~---dADl~~Aa~~i 292 (521)
T 4e4g_A 216 GLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMNGKRAQCFGGAKNHMIIMP---DADLDQAANAL 292 (521)
T ss_dssp TCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECT---TSCHHHHHHHH
T ss_pred CCCcCeEEEEeCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCCCeeecCCCCCeEEEcC---CCCHHHHHHHH
Confidence 99999999999888889999997 99999999999999999999999999999999999999999 99999999999
Q ss_pred HHhhcccCCCCccccCCceEEccc-hHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617 240 IGGKFASCNGQVCVGVDYILVEKK-FAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV 316 (484)
Q Consensus 240 ~~~~~~~~~Gq~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~ 316 (484)
++++|. |+||.|++++|+|||++ +||+|+++|+++++++++|+| ++++++||++++.+++++.++|+++.+ |++++
T Consensus 293 ~~~~f~-n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~ 371 (521)
T 4e4g_A 293 IGAGYG-SAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLV 371 (521)
T ss_dssp HHHHHG-GGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHh-CCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEE
Confidence 999999 99999999999999999 999999999999999999998 899999999999999999999999864 78999
Q ss_pred eCCCcC-----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh
Q 038617 317 HGGLLD-----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS 391 (484)
Q Consensus 317 ~gg~~~-----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~ 391 (484)
+||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++
T Consensus 372 ~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~ 451 (521)
T 4e4g_A 372 VDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFAS 451 (521)
T ss_dssp ECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHH
T ss_pred ecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHH
Confidence 999642 469999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeEEECCCccccCCCCCCcccCCCCCCC--CcchHHHHHHhhhccEEEEec
Q 038617 392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIG--RYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 392 ~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G--~~~g~~~~~~f~~~k~v~~~~ 444 (484)
++++|+|+||+++. ...+.+||||+|.||+| +++|++|+++|++.|+|+.+.
T Consensus 452 ~l~aG~V~vN~~~~-~~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~~ 505 (521)
T 4e4g_A 452 RINIGMVGVNVPIP-VPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITSRW 505 (521)
T ss_dssp HCCCSEEEESCSSC-CCCTTSCBCCEETTEESSCCBSHHHHHHHTEEEEEEEECC
T ss_pred hCCeeeEEECCCCC-CCCCCCCcCCcccCCCCCCccchHHHHHHhheEEEEEEec
Confidence 99999999998764 34578999999999999 789999999999999998864
No 24
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=4.9e-95 Score=763.11 Aligned_cols=432 Identities=24% Similarity=0.335 Sum_probs=405.1
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..+++ .|+..+++.++++++.
T Consensus 60 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~ 138 (515)
T 2d4e_A 60 RGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEY 138 (515)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478899999999999999999999999999999999999999999999999999999999998 6999999999999988
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+++.+.. . +....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..|++++.++
T Consensus 139 ~~~~~g~~-~--~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea 215 (515)
T 2d4e_A 139 AEHAMEDR-T--FPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEA 215 (515)
T ss_dssp GGGTTCEE-E--CCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHT
T ss_pred HHHhcCcc-c--ccCCCCceeEEEEecCCceEEECCCCchhhhhhhhhhHHHHcCCeeeecCCCCcHHHHHHHHHHHHHh
Confidence 87765321 1 11112345688999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+|+|++|+|+| +.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++.
T Consensus 216 GlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~~l~~v~lELGGk~p~iV~~---dADl~~Aa~~ 292 (515)
T 2d4e_A 216 DLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGKSPALVFA---DADLERALDA 292 (515)
T ss_dssp TCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECT---TSCHHHHHHH
T ss_pred CCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCceEecCCCcCeEEEcC---CCCHHHHHHH
Confidence 99999999999 567899999997 99999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV 316 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~ 316 (484)
+++++|. |+||.|++++|||||++++|+|+++|+++++++++|+| ++++++||++++.+++++.++|+++.+ |++++
T Consensus 293 i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~ 371 (515)
T 2d4e_A 293 VVFQIFS-FNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLL 371 (515)
T ss_dssp HHHHHHG-GGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHh-cCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccCccCCCcCHHHHHHHHHHHHHHHHCCCEEE
Confidence 9999999 99999999999999999999999999999999999999 888999999999999999999999864 67999
Q ss_pred eCCCcCC---------CCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHH
Q 038617 317 HGGLLDK---------ENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKK 387 (484)
Q Consensus 317 ~gg~~~~---------~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~ 387 (484)
+||..+. .|+|++|||+.+ +++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++
T Consensus 372 ~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~ 450 (515)
T 2d4e_A 372 VGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAH 450 (515)
T ss_dssp ECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHH
T ss_pred eCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHH
Confidence 9997643 699999999999 999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 388 QIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 388 ~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|+.+.
T Consensus 451 ~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~K~v~~~~ 505 (515)
T 2d4e_A 451 RLALELEAGMVYLNSHNV--RHLPTPFGGVKGSGDRREGGTYALDFYTDLKTIALPL 505 (515)
T ss_dssp HHHHHSCSSEEEESSSCC--CCTTSCBCCSGGGBCSCBSHHHHHHHHEEEEEEEEES
T ss_pred HHHHhCCeeEEEECCCCC--CCCCCCCCCcCCCCCCccchHHHHHHhCceeEEEEcC
Confidence 999999999999998754 4678999999999999999999999999999998864
No 25
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=4.2e-95 Score=759.02 Aligned_cols=432 Identities=22% Similarity=0.331 Sum_probs=404.7
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..+++ .|+..+++.+++++..
T Consensus 40 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~ 118 (479)
T 2imp_A 40 DGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEW 118 (479)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999997 5999999999999988
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+++.+... +....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|++++.++
T Consensus 119 ~~~~~~~~~---~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~a 195 (479)
T 2imp_A 119 ARRYEGEII---QSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEI 195 (479)
T ss_dssp TTTCCCEEE---CCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred HHHhhCCcc---ccCCCCceeEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHh
Confidence 776654321 11112335688999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccCC-hhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 162 -LDCKAIKVTNGG-VDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 162 -lp~g~v~~v~g~-~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+|+|++|+++|+ .+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++.
T Consensus 196 GlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~---dADl~~aa~~ 272 (479)
T 2imp_A 196 GLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMD---DADLELAVKA 272 (479)
T ss_dssp TCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECT---TSCHHHHHHH
T ss_pred CCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCCcEEEEcCCcCeEEECC---CCCHHHHHHH
Confidence 999999999994 56899999997 99999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-C-CCCccccccCHHHHHHHHHHhhchhc-CCce
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-K-DSKSISRIINEYHFERLRKLLKDPLV-ADAI 315 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~-~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~ 315 (484)
+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| + +++++||++++.+++++.++++++.+ |+++
T Consensus 273 i~~~~~~-n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~ 351 (479)
T 2imp_A 273 IVDSRVI-NSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARV 351 (479)
T ss_dssp HHTTSST-TTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHhh-cCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEE
Confidence 9999999 99999999999999999999999999999999999999 6 79999999999999999999999864 6789
Q ss_pred eeCCCc-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccc
Q 038617 316 VHGGLL-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTS 394 (484)
Q Consensus 316 ~~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~ 394 (484)
++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++++
T Consensus 352 ~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~ 431 (479)
T 2imp_A 352 AFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLK 431 (479)
T ss_dssp EECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECCCHHHHHHHHHHCC
T ss_pred EECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCC
Confidence 999975 3368999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 395 SGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 395 ~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
+|+|+||++..+ .+.+||||+|.||+|+++|.+|+++|++.|+|+.+
T Consensus 432 ~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~ 478 (479)
T 2imp_A 432 FGETYINRENFE--AMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478 (479)
T ss_dssp SSEEEESSCCCC--CTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEEE
T ss_pred EeEEEECCCCCC--CCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEec
Confidence 999999987764 57899999999999999999999999999999765
No 26
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=1.5e-94 Score=760.26 Aligned_cols=435 Identities=23% Similarity=0.351 Sum_probs=406.3
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..+++ .|+..+++.+++++..
T Consensus 70 ~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~ 148 (516)
T 1uzb_A 70 KAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARA 148 (516)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999998 5999999999999999
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
++++.++... . ....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..|++++.++
T Consensus 149 ~~~~~~~~~~-~-~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~ea 226 (516)
T 1uzb_A 149 ALRYRYPAVE-V-VPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEA 226 (516)
T ss_dssp HGGGCSSCCC-C-CCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHH
T ss_pred HHHhcCCccc-c-cCCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHh
Confidence 9887654311 0 1112335688999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHh------cccCceeeecCCcCceEEcCCCCCCCH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAA------KHLTPVTLELGGKCPAILDTLSSPLDI 232 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~------~~~~~~~lelgG~~p~iV~~~~~daDl 232 (484)
+|+|++|+++| +.+.++.|++|+ ||+|+||||+.+|+.|++.++ +++||+++|+|||||+||++ |||+
T Consensus 227 GlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p~iV~~---dADl 303 (516)
T 1uzb_A 227 GFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDE---TADF 303 (516)
T ss_dssp TCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECT---TSCH
T ss_pred CCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHhhhccccccccceeEEecCCccceeECC---CCCH
Confidence 99999999999 678899999998 999999999999999999998 78999999999999999999 9999
Q ss_pred HHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcC
Q 038617 233 KVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVA 312 (484)
Q Consensus 233 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~ 312 (484)
+.|++.+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+|++++++||++++.+++++.++++++.+.
T Consensus 304 ~~Aa~~i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~~ 382 (516)
T 1uzb_A 304 DLAAEGVVVSAYG-FQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYIEIGKNE 382 (516)
T ss_dssp HHHHHHHHHHHHG-GGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCGGGCCSBCCCSCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHh-CCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCCCCccccccCCCCCHHHHHHHHHHHHHHHHC
Confidence 9999999999999 999999999999999999999999999999999999988889999999999999999999998765
Q ss_pred CceeeCCCc-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh
Q 038617 313 DAIVHGGLL-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS 391 (484)
Q Consensus 313 ~~~~~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~ 391 (484)
+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++
T Consensus 383 G~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~ 462 (516)
T 1uzb_A 383 GQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARR 462 (516)
T ss_dssp SEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHH
T ss_pred CCEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHH
Confidence 588899975 3469999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeEEECCCccccCCCCCCcccCCCCCCCC-cchHHHHHHhhhccEEEEe
Q 038617 392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGR-YHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 392 ~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~-~~g~~~~~~f~~~k~v~~~ 443 (484)
++++|+|+||+++.+...+.+||||+|.||+|+ ++|.+++++|++.|+|+.+
T Consensus 463 ~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~~ 515 (516)
T 1uzb_A 463 EFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515 (516)
T ss_dssp HSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEEE
T ss_pred hCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcCCeeEEEec
Confidence 999999999997665556789999999999995 7899999999999998764
No 27
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=5.3e-95 Score=757.04 Aligned_cols=427 Identities=27% Similarity=0.379 Sum_probs=401.5
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..+++. |+..+++.+++++..
T Consensus 30 ~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~ 108 (486)
T 3pqa_A 30 ALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAKILAIDAGKPIKQARV-EVERSIGTFKLAAFY 108 (486)
T ss_dssp CCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999999999999999974 999999999999999
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
++++.+... . ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..|++++.++
T Consensus 109 ~~~~~~~~~-~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~a 183 (486)
T 3pqa_A 109 VKEHRDEVI-P----SDDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENA 183 (486)
T ss_dssp HHHCCEEEE-C----CTTEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHHHHHH
T ss_pred HHHhcCcee-c----CCCceeEEEEccccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHH
Confidence 988754321 1 12446788999999999999999999999999999999999999999999999999999999987
Q ss_pred -----cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHH
Q 038617 162 -----LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKV 234 (484)
Q Consensus 162 -----lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~ 234 (484)
+|+|++|+++| +.+.++.|++|+ ||+|+||||+.+|+.|++.++ +||+++|||||||+||++ |||++.
T Consensus 184 l~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa--~~~v~lELGGk~p~iV~~---dADl~~ 258 (486)
T 3pqa_A 184 LKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--FKKIALELGGVNPNIVLK---DADLNK 258 (486)
T ss_dssp HHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC--SSEEEEECCCCEEEEECT---TSCHHH
T ss_pred HHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC--CCceeeccCCcCcEEEcC---CCCHHH
Confidence 99999999999 456789999997 999999999999999999876 899999999999999999 999999
Q ss_pred HHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-C
Q 038617 235 TVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-A 312 (484)
Q Consensus 235 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~ 312 (484)
|++.+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ +
T Consensus 259 Aa~~i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~G 337 (486)
T 3pqa_A 259 AVNALIKGSFI-YAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEG 337 (486)
T ss_dssp HHHHHHHHHHG-GGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHh-cCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCCcCCCCCHHHHHHHHHHHHHHHHCC
Confidence 99999999999 99999999999999999999999999999999999999 899999999999999999999999874 7
Q ss_pred CceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617 313 DAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG 392 (484)
Q Consensus 313 ~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~ 392 (484)
+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+| ||||+++|+++|||++||||+|.+++++++++
T Consensus 338 a~v~~gG~~--~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~ 413 (486)
T 3pqa_A 338 GKLLLGGKR--DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAEN 413 (486)
T ss_dssp CEEEECCCE--ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHTCSSCCSEEEEECSBHHHHHHHHHH
T ss_pred CEEEecCCC--CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHh
Confidence 799999965 5899999999 9999999999999999999999999 99999999999999999999999999999999
Q ss_pred cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecC
Q 038617 393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSF 445 (484)
Q Consensus 393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~ 445 (484)
+++|+|+||+++.+ ..+.+||||+|.||+|+++|.+|+++|++.|+|+++..
T Consensus 414 l~aG~v~vN~~~~~-~~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~~~ 465 (486)
T 3pqa_A 414 LEFGGVVINDSSLF-RQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISKA 465 (486)
T ss_dssp SCSSEEEESSCTTC-CCTTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEEC-
T ss_pred CCcceEEEeCCCCc-CCCCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEcCC
Confidence 99999999998753 34589999999999999999999999999999988753
No 28
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=1.7e-94 Score=752.26 Aligned_cols=432 Identities=22% Similarity=0.357 Sum_probs=408.5
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..+++. |+..+++.++++++.
T Consensus 25 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~ 103 (462)
T 3etf_A 25 WANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIKQARA-EVTKSAALCDWYAEH 103 (462)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHh
Confidence 5789999999999999999999999999999999999999999999999999999999999974 999999999999999
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+++.++.. ....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..|++++.++
T Consensus 104 ~~~~~~~~~----~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~a 179 (462)
T 3etf_A 104 GPAMLNPEP----TLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEA 179 (462)
T ss_dssp HHHHTSCEE----CSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred HHHhcCCcc----cCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHh
Confidence 888765431 1122346788999999999999999999999999999999999999999999999999999999998
Q ss_pred -cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617 162 -LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI 239 (484)
Q Consensus 162 -lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i 239 (484)
+|+|++|+++|+.+.+..|++|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++.+
T Consensus 180 glP~gv~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~---dADl~~Aa~~i 256 (462)
T 3etf_A 180 GTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLN---DADLELAVKAA 256 (462)
T ss_dssp TCCBTTEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEECT---TSCHHHHHHHH
T ss_pred CCCcCeEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCCCCccEECC---CCCHHHHHHHH
Confidence 99999999999888899999997 99999999999999999999999999999999999999999 99999999999
Q ss_pred HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCceee
Q 038617 240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIVH 317 (484)
Q Consensus 240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~ 317 (484)
++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ |+++++
T Consensus 257 ~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~ 335 (462)
T 3etf_A 257 VAGRYQ-NTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLL 335 (462)
T ss_dssp HHHHHG-GGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHh-cCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEe
Confidence 999999 99999999999999999999999999999999999999 899999999999999999999999874 679999
Q ss_pred CCCc-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcccee
Q 038617 318 GGLL-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSG 396 (484)
Q Consensus 318 gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g 396 (484)
||.. +.+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|
T Consensus 336 gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~aG 415 (462)
T 3etf_A 336 GGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLECG 415 (462)
T ss_dssp CCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHHHHHHHHHHCCSS
T ss_pred CCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcc
Confidence 9874 357999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 397 SLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 397 ~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
+|+||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|++++
T Consensus 416 ~v~vN~~~~--~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~r 461 (462)
T 3etf_A 416 GVFINGYSA--SDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR 461 (462)
T ss_dssp EEEESSCCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEECC
T ss_pred eEEECCCCC--CCCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEec
Confidence 999999764 4688999999999999999999999999999998763
No 29
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=8.2e-95 Score=757.21 Aligned_cols=432 Identities=25% Similarity=0.377 Sum_probs=404.6
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..+++. |+..+++.+++++..
T Consensus 43 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~ 121 (481)
T 3jz4_A 43 KMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKG-EISYAASFIEWFAEE 121 (481)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 4688999999999999999999999999999999999999999999999999999999999975 999999999998877
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
..+..... .+....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..|++++.++
T Consensus 122 ~~~~~~~~---~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~a 198 (481)
T 3jz4_A 122 GKRIYGDT---IPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRA 198 (481)
T ss_dssp GGGCCEEE---ECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred HHHhcCcc---ccccCCCceEEEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHh
Confidence 65542211 111122446788999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+|+|++|+++| +.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++.
T Consensus 199 GlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~---dADl~~Aa~~ 275 (481)
T 3jz4_A 199 GVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFD---DADLDKAVEG 275 (481)
T ss_dssp TCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTTTTCEEEEECCCCEEEEECT---TSCHHHHHHH
T ss_pred CcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCCceEEecCCCCeEEEcC---CCCHHHHHHH
Confidence 99999999999 678899999997 99999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV 316 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~ 316 (484)
+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ |++++
T Consensus 276 i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~ 354 (481)
T 3jz4_A 276 ALASKFR-NAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVV 354 (481)
T ss_dssp HHHHHHG-GGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHH-hCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCcCccccccCHHHHHHHHHHHHHHHHCCCEEE
Confidence 9999999 99999999999999999999999999999999999999 899999999999999999999999874 77999
Q ss_pred eCCCc-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccce
Q 038617 317 HGGLL-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS 395 (484)
Q Consensus 317 ~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~ 395 (484)
+||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++
T Consensus 355 ~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~ 434 (481)
T 3jz4_A 355 CGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEY 434 (481)
T ss_dssp ECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHCCC
T ss_pred eCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCe
Confidence 99976 44689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 396 GSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 396 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
|+|+||++.. ..+.+||||+|.||+|+++|++|+++|++.|+|++.
T Consensus 435 G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~~ 480 (481)
T 3jz4_A 435 GIVGINTGII--SNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 480 (481)
T ss_dssp SEEEESCSCC--CCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred eeEEECCCCC--CCCCCCcCCcccCcCCCCchHHHHHHhhceeEEEEe
Confidence 9999998765 467899999999999999999999999999999764
No 30
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=8.5e-95 Score=757.03 Aligned_cols=432 Identities=26% Similarity=0.365 Sum_probs=404.8
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.++++++.
T Consensus 44 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~ 122 (487)
T 2w8n_A 44 DCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHG-EILYSAFFLEWFSEE 122 (487)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 4788999999999999999999999999999999999999999999999999999999999985 999999999999988
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+++.. +.... ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|++++.++
T Consensus 123 ~~~~~g-~~~~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~a 199 (487)
T 2w8n_A 123 ARRVYG-DIIHT--PAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQA 199 (487)
T ss_dssp GGGCCC-EEECC--SCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred HHHhcC-ccccc--CCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHh
Confidence 876432 21111 123446688999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeecc---C-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617 162 -LDCKAIKVTN---G-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVT 235 (484)
Q Consensus 162 -lp~g~v~~v~---g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~a 235 (484)
+|+|++|+++ | +.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|
T Consensus 200 GlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~pv~lElGGk~p~iV~~---dADl~~A 276 (487)
T 2w8n_A 200 GIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFD---SANVDQA 276 (487)
T ss_dssp TCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHHHHTTTCEEEEEECEEEEEEECT---TSCHHHH
T ss_pred CCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCCcEEEecCCCCeEEECC---CCCHHHH
Confidence 9999999999 8 567899999998 99999999999999999999999999999999999999999 9999999
Q ss_pred HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHh-hcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-C
Q 038617 236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKK-FYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-A 312 (484)
Q Consensus 236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~ 312 (484)
++.+++++|. |+||.|++++|||||+++||+|+++|++++++ +++||| ++++++||++++.+++++.++++++.+ |
T Consensus 277 a~~i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~G 355 (487)
T 2w8n_A 277 VAGAMASKFR-NTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKG 355 (487)
T ss_dssp HHHHHHHHTC-CCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHh-CCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcccccCcccCCCCHHHHHHHHHHHHHHHHCC
Confidence 9999999999 99999999999999999999999999999999 999999 889999999999999999999999864 6
Q ss_pred CceeeCCCcCCCCC-eeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh
Q 038617 313 DAIVHGGLLDKENL-FIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS 391 (484)
Q Consensus 313 ~~~~~gg~~~~~g~-~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~ 391 (484)
+++++||..+..|+ |++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++
T Consensus 356 a~~~~gg~~~~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~ 435 (487)
T 2w8n_A 356 ATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAE 435 (487)
T ss_dssp CEEEECCSBCTTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHHHHHHHHTCTTCCSEEEEECCCHHHHHHHHH
T ss_pred CEEEeCCccCCCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEeCCCHHHHHHHHH
Confidence 78999997655688 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 392 GTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 392 ~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
++++|+|+||++..+ .+.+||||+|.||+|+++|.+|+++|++.|+|+.+
T Consensus 436 ~l~aG~v~vN~~~~~--~~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~~~ 485 (487)
T 2w8n_A 436 QLEVGMVGVNEGLIS--SVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYG 485 (487)
T ss_dssp HSCSSEEEESCSCCC--CTTSCBCCSGGGEESCBSTTTGGGGGEEEEEEEEC
T ss_pred hCCeeeEEEcCCCCC--CCCCCCCCCCCCCcCCCchHHHHHHhcCccEEEEe
Confidence 999999999997754 56799999999999999999999999999999764
No 31
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=2.6e-94 Score=752.08 Aligned_cols=441 Identities=21% Similarity=0.303 Sum_probs=408.3
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+++|.++|.++|++++++|++++++|++++++|+||+..+ . .|+...+..+++++..
T Consensus 24 ~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~-~-~ev~~~~~~~~~~~~~ 101 (474)
T 4h7n_A 24 PPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLSIT-V-LEIDSFLASIDRWCGL 101 (474)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSHHH-H-HHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHH-H-HHHHHHHHHHHHHHhh
Confidence 5789999999999999999999999999999999999999999999999999999998544 3 4999999999999988
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
..++......... .........++|+|||++|+|||||++++++++++||++||+||+|||+.+|.++..+.+++.++
T Consensus 102 ~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~a 179 (474)
T 4h7n_A 102 APELLQTSAKNTS--IPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPSEIAPRFVAPLLMALNTV 179 (474)
T ss_dssp HHHHHCCEEEECS--STTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEECTTSCTTHHHHHHHHTTC
T ss_pred hhhcccccccCCC--CCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeecccccCchHHHHHHhhhhhh
Confidence 8887665432211 12234567889999999999999999999999999999999999999999999999999999998
Q ss_pred -cCccceeeccCChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHH
Q 038617 162 -LDCKAIKVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRII 240 (484)
Q Consensus 162 -lp~g~v~~v~g~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~ 240 (484)
+|+|++|+++|+.+.+..|+.| +|+|+||||+.+|+.|++.+++++||+++|||||||+||++ |||++.|++.++
T Consensus 180 g~p~gv~~~v~g~~~~~~~l~~~-v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~~---dAdl~~aa~~i~ 255 (474)
T 4h7n_A 180 PELRDVLIFVEGGGETGANLINY-VDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPAIVLE---SANLELATSAIL 255 (474)
T ss_dssp TTTTTTEEECCCCHHHHHHHHTT-CSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCCEEEEECT---TSCHHHHHHHHH
T ss_pred cccccceeeccccchhhhhhhhc-cceEEeccccchhhhhhhhhhcccccccccCCCcCccccCc---hhhHHHHHHHHH
Confidence 9999999999999999999977 99999999999999999999999999999999999999999 999999999999
Q ss_pred HhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCceeeC
Q 038617 241 GGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIVHG 318 (484)
Q Consensus 241 ~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~~g 318 (484)
+++|. |+||.|++++|+|||++++|+|+++|.+++.++++|+| ++++++||++++.+.+++.++++++.+ ++.++.|
T Consensus 256 ~~~~~-n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~v~~G 334 (474)
T 4h7n_A 256 WGAVV-NTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCG 334 (474)
T ss_dssp HHHHG-GGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred hhhcc-CCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHHHHHHHHhhCceeccC
Confidence 99999 99999999999999999999999999999999999999 889999999999999999999999875 6788888
Q ss_pred CCcC--CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcccee
Q 038617 319 GLLD--KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSSG 396 (484)
Q Consensus 319 g~~~--~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g 396 (484)
|..+ .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|
T Consensus 335 g~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG 414 (474)
T 4h7n_A 335 GKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAG 414 (474)
T ss_dssp CCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSSHHHHHHHHTTSCCS
T ss_pred CcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCee
Confidence 8753 46899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEECCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEecCcCCCCC
Q 038617 397 SLIFNDTLVQQLCDVLPFGGVGQSGIG-RYHGHYSFETFSHEKAIMQRSFFLELEP 451 (484)
Q Consensus 397 ~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~~~~~~~~~ 451 (484)
+|+||+.+.+...+..||||+|.||+| +++|.+|+++|++.|+|+++....+.++
T Consensus 415 ~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~~~~~~~p~ 470 (474)
T 4h7n_A 415 AISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTNSTSDPW 470 (474)
T ss_dssp EEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEECSSSCCTT
T ss_pred EEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEECCCCCCCCC
Confidence 999999887767789999999999998 7899999999999999998865433333
No 32
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=4.2e-94 Score=754.06 Aligned_cols=433 Identities=21% Similarity=0.254 Sum_probs=400.5
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|+++++.|+|||..++. .|+..+++.+++++..
T Consensus 55 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~ 133 (500)
T 2j6l_A 55 QASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGV-GEVQEYVDICDYAVGL 133 (500)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478899999999999999999999999999999999999999999999999999999999995 5999999999999887
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhcc-
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPL- 160 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~- 160 (484)
.+++.+.. . +....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.+
T Consensus 134 ~~~~~g~~-~--~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~a 210 (500)
T 2j6l_A 134 SRMIGGPI-L--PSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKV 210 (500)
T ss_dssp TTTCCCBE-E--CCSSTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHH
T ss_pred HHHhcCcc-c--cccCCCceeEEEEecccEEEEECCCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHH
Confidence 76653321 1 1111122356789999999999999999999999999999999999999999999999999998765
Q ss_pred ---c-cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617 161 ---Y-LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVT 235 (484)
Q Consensus 161 ---a-lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~a 235 (484)
+ +|+|++|+++|+.++++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|
T Consensus 211 l~~aGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~~~aa~~l~~v~lELGGk~p~iV~~---dADl~~A 287 (500)
T 2j6l_A 211 LEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAIIAFE---DADLSLV 287 (500)
T ss_dssp HHHTTCCGGGEEEECCSHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECT---TCCHHHH
T ss_pred HHhhcCCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHhccCCCceEEEcCCCCceEECC---CCCHHHH
Confidence 4 99999999999778899999997 99999999999999999999999999999999999999999 9999999
Q ss_pred HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CC
Q 038617 236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-AD 313 (484)
Q Consensus 236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~ 313 (484)
++.+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ |+
T Consensus 288 a~~i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga 366 (500)
T 2j6l_A 288 VPSALFAAVG-TAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGG 366 (500)
T ss_dssp HHHHHHHHHG-GGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHh-cCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCC
Confidence 9999999999 99999999999999999999999999999999999999 889999999999999999999999864 67
Q ss_pred ceeeCCCc-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHh--
Q 038617 314 AIVHGGLL-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIV-- 390 (484)
Q Consensus 314 ~~~~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~-- 390 (484)
++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++
T Consensus 367 ~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~ 446 (500)
T 2j6l_A 367 TVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGP 446 (500)
T ss_dssp EEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHHHHHHST
T ss_pred EEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhh
Confidence 89999975 346899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 391 SGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 391 ~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
.++++|+|+||+.... ..+.+||||+|.||+|+++|.+|+++|++.|+|+++
T Consensus 447 ~~~~~G~V~vN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 498 (500)
T 2j6l_A 447 KGSDCGIVNVNIPTSG-AEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCTIN 498 (500)
T ss_dssp TSCCSSEEEESSCTTC-CCTTSEECCSGGGCSCCEESTTGGGGGEEEEEEEEE
T ss_pred ccCCeeEEEECCCCcc-CCCCCCcCCcCCCCCCCcchHHHHHHhhceEEEEEe
Confidence 7799999999986542 456899999999999999999999999999999765
No 33
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=6.9e-94 Score=753.83 Aligned_cols=433 Identities=23% Similarity=0.371 Sum_probs=387.8
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..+++. |+..+++.+++++..
T Consensus 46 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-Ev~~~~~~~~~~a~~ 124 (508)
T 3r64_A 46 QASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKANL-EITLAGNITKESASF 124 (508)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCCHHHHHH-HHHHHHHHHHHHTTS
T ss_pred CCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999999999986 999999999998876
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHH-HHHHHHhcc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECA-SFLAETIPL 160 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~-~~l~~~l~~ 160 (484)
.+.+.+ ..... ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++ ..|++++.+
T Consensus 125 ~~~~~~--~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~ 201 (508)
T 3r64_A 125 PGRVHG--RISPS-NTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEE 201 (508)
T ss_dssp TTTCCE--EEECC-SSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHT
T ss_pred hhhhcC--ccccc-CCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHH
Confidence 654322 11110 11234678899999999999999999999999999999999999999999999999 999999999
Q ss_pred c-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhc--ccCceeeecCCcCceEEcCCCCCCCHHHH
Q 038617 161 Y-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAK--HLTPVTLELGGKCPAILDTLSSPLDIKVT 235 (484)
Q Consensus 161 a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~--~~~~~~lelgG~~p~iV~~~~~daDl~~a 235 (484)
+ +|+|++|+++| +.+.++.|++|+ ||+|+||||+.+|+.|++.+++ ++||+++|+|||||+||++ |||++.|
T Consensus 202 aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~aa~~~~l~~v~lElGGk~p~iV~~---dADl~~A 278 (508)
T 3r64_A 202 AGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVVLA---DADIDAA 278 (508)
T ss_dssp TTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHHHHHHSSSSCCEEEEECCCCCEEEECT---TSCHHHH
T ss_pred hCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHHHHhhcccCCCceEeecCCcCceEECC---CCCHHHH
Confidence 9 99999999999 478999999997 9999999999999999999998 8999999999999999999 9999999
Q ss_pred HHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CC
Q 038617 236 VKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-AD 313 (484)
Q Consensus 236 a~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~ 313 (484)
++.+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ |+
T Consensus 279 a~~i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga 357 (508)
T 3r64_A 279 AQAAAVGAFL-HQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGA 357 (508)
T ss_dssp HHHHHHHHHT-STTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHh-cCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCC
Confidence 9999999999 99999999999999999999999999999999999999 889999999999999999999999875 67
Q ss_pred ceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcc
Q 038617 314 AIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGT 393 (484)
Q Consensus 314 ~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l 393 (484)
++++||.. +|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++
T Consensus 358 ~v~~gG~~--~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l 435 (508)
T 3r64_A 358 TVQVEGPI--EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQI 435 (508)
T ss_dssp EEEECCCE--ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTS
T ss_pred EEEecCCC--CCcEEecEEEecCCCCChhhcccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhC
Confidence 99999975 6899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecC
Q 038617 394 SSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSF 445 (484)
Q Consensus 394 ~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~ 445 (484)
++|+|+||+++.+ ..+.+||||+|.||+|+++|.+|+++|++.|+|+++..
T Consensus 436 ~aG~V~vN~~~~~-~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~v~~~~~ 486 (508)
T 3r64_A 436 DSGMVHINDLTVN-DEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWIGIKRS 486 (508)
T ss_dssp CSSEEEECC---------------------CCCHHHHHHHTEEEEEEEEECC
T ss_pred CcceEEEcCCCCC-CCCCCCcCCcCCCCCCcCccHHHHHHhhceEEEEEecc
Confidence 9999999998754 57889999999999999999999999999999988753
No 34
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=3.1e-94 Score=754.62 Aligned_cols=440 Identities=23% Similarity=0.311 Sum_probs=405.3
Q ss_pred CCCHHHHHHHHHHHHHHhH-hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFR-SGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALS 80 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~ 80 (484)
.++.+|+++|+++|++||+ .|+.++.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++.+++++.
T Consensus 50 ~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~ 128 (501)
T 1uxt_A 50 SPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAEL 128 (501)
T ss_dssp CCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGG
T ss_pred CCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHH
Confidence 4788999999999999999 99999999999999999999999999999999999999999998 599999999999988
Q ss_pred HHHHhhcCccccCccccC--CCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHh
Q 038617 81 CLDKWMAPKKRRLPLLFF--PASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETI 158 (484)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l 158 (484)
..+++... ......... +...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|++++
T Consensus 129 ~~~~~~g~-~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~ 207 (501)
T 1uxt_A 129 DLKKIGGD-YIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKAL 207 (501)
T ss_dssp GGGGTCCE-EEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHH
T ss_pred HHHHhcCc-cccccccCCCcCceEEEEEeeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHH
Confidence 88776432 111110011 225688999999999999999999999999999999999999999999999999999999
Q ss_pred ccc-cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHH
Q 038617 159 PLY-LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTV 236 (484)
Q Consensus 159 ~~a-lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa 236 (484)
.++ +|+|++|+++|+.+.++.|++|+ ||+|+||||+.+|+.|++.++ +||+++|+|||||+||++ |||++.|+
T Consensus 208 ~eaGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~G~~i~~~aa--l~~v~lELGGk~p~iV~~---dADl~~Aa 282 (501)
T 1uxt_A 208 LDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VKQYVMELGGGDPAIVLE---DADLDLAA 282 (501)
T ss_dssp HHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHC--SSEEEEECCCCEEEEECT---TSCHHHHH
T ss_pred HHhCCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeCcHHHHHHHHHhcC--CCeEEEEcCCcCeEEECC---CCCHHHHH
Confidence 999 99999999999558899999997 999999999999999999887 899999999999999999 99999999
Q ss_pred HHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCc
Q 038617 237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADA 314 (484)
Q Consensus 237 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~ 314 (484)
+.+++++|. |+||.|++++|||||+++||+|+++|+++++++++||| ++++++||++++.+++++.++++++.+ |++
T Consensus 283 ~~i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~ 361 (501)
T 1uxt_A 283 DKIARGIYS-YAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGR 361 (501)
T ss_dssp HHHHHHHHG-GGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHhc-CCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHHHHHHCCCE
Confidence 999999999 99999999999999999999999999999999999999 889999999999999999999999874 678
Q ss_pred eeeCCCcCCCC-CeeeeEEEeCCC---CCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHh
Q 038617 315 IVHGGLLDKEN-LFIEPTILLDPP---LDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIV 390 (484)
Q Consensus 315 ~~~gg~~~~~g-~~~~Ptil~~~~---~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 390 (484)
+++||.. .| +|++|||+.+++ ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++
T Consensus 362 ~~~gG~~--~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 439 (501)
T 1uxt_A 362 VLAGGRR--LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAV 439 (501)
T ss_dssp EEECCCB--CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHH
T ss_pred EEeCCcc--CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHH
Confidence 9999975 57 999999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred hccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEecCcCCCCCCC
Q 038617 391 SGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRSFFLELEPRY 453 (484)
Q Consensus 391 ~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~~~~~~~~ 453 (484)
+++++|+|+||+++ +...+.+||||+|.||+|+++|.+|+++|++.|+|+.+.. .+..++|
T Consensus 440 ~~l~~G~V~iN~~~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~~-~~~~~~~ 500 (501)
T 1uxt_A 440 RLLEVGAIYINDMP-RHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNYK-GKGVWKY 500 (501)
T ss_dssp HHCCSSEEEETSCC-CCTTSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEEECT-TSSSSSC
T ss_pred HhCCEeeEEEeCCC-CCCCCCCCCCCcCCCCCCccChHHHHHHhCceeEEEEecC-CCccccc
Confidence 99999999999874 2356889999999999999999999999999999988742 2344444
No 35
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=9.2e-94 Score=751.44 Aligned_cols=433 Identities=25% Similarity=0.341 Sum_probs=407.2
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..+++..|+..+++.++++++.
T Consensus 40 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~ 119 (490)
T 2ve5_A 40 RASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGL 119 (490)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999755999999999999988
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+++.... . + ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..|++++.++
T Consensus 120 ~~~~~~~~-~--~-~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~a 195 (490)
T 2ve5_A 120 VPAIEGEQ-I--P-LRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEA 195 (490)
T ss_dssp GGGCCEEE-E--E-EETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred HHHhcCcc-c--c-CCCCceeeEeeccccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHh
Confidence 87653221 1 1 123446788999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHH-hcccCceeeecCCcCceEEcCCCCCCCHHHHHH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAA-AKHLTPVTLELGGKCPAILDTLSSPLDIKVTVK 237 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a-~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~ 237 (484)
+|+|++|+++| +.+.++.|++|+ ||+|+||||+.+|+.|++.+ ++++||+++|+|||||+||++ |||++.|++
T Consensus 196 GlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i~~~a~a~~l~~v~lElGGk~p~iV~~---dADl~~Aa~ 272 (490)
T 2ve5_A 196 GVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFP---DADLDRAAD 272 (490)
T ss_dssp TCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECT---TSCHHHHHH
T ss_pred CcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHHHHhchhccccceEEEcCCCceeEECC---CCCHHHHHH
Confidence 99999999999 778999999998 99999999999999999999 899999999999999999999 999999999
Q ss_pred HHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCce
Q 038617 238 RIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAI 315 (484)
Q Consensus 238 ~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~ 315 (484)
.+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ |+++
T Consensus 273 ~i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~d~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~ 351 (490)
T 2ve5_A 273 IAVMANFF-SSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARL 351 (490)
T ss_dssp HHHHHHHG-GGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHh-cCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCEE
Confidence 99999999 99999999999999999999999999999999999999 889999999999999999999999874 6799
Q ss_pred eeCCCcC-----CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHh
Q 038617 316 VHGGLLD-----KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIV 390 (484)
Q Consensus 316 ~~gg~~~-----~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 390 (484)
++||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++
T Consensus 352 ~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPvl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 431 (490)
T 2ve5_A 352 LCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAI 431 (490)
T ss_dssp EECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHH
T ss_pred EeCCcccccccCCCCceEccEEEecCCCCCccccceeeCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH
Confidence 9999752 36899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 391 SGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 391 ~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
+++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|+|+++.
T Consensus 432 ~~l~aG~v~vN~~~~--~~~~~pfGG~k~SG~G~~~G~~~~~~f~~~k~v~~~~ 483 (490)
T 2ve5_A 432 HRLEAGICWINTWGE--SPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVEL 483 (490)
T ss_dssp HHSCCSEEEESCCSC--CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred HhCCcceEEECCCCC--CCCCCCcCCCCCCCCCCcchHHHHHHhheeEEEEEcc
Confidence 999999999999764 4688999999999999999999999999999998864
No 36
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=1.3e-93 Score=749.31 Aligned_cols=433 Identities=23% Similarity=0.328 Sum_probs=382.4
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..+++. |+..+++.+++++..
T Consensus 40 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~ 118 (485)
T 4dng_A 40 LATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTI-ELEQTIAILDEAMTY 118 (485)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999999999986 999999999999988
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHH-HHHHHHhcc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECA-SFLAETIPL 160 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~-~~l~~~l~~ 160 (484)
.+.+. +..... ....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++ ..|.+++.+
T Consensus 119 ~~~~~-~~~~~~-~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~ 196 (485)
T 4dng_A 119 TGELG-GVKEVP-SDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEH 196 (485)
T ss_dssp GGGCS-CEECCC-CSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHH
T ss_pred HHHhC-Ceeccc-cCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHH
Confidence 76532 221111 011234678899999999999999999999999999999999999999999999999 999999999
Q ss_pred c-cCccceeeccCCh-hHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHH
Q 038617 161 Y-LDCKAIKVTNGGV-DVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVK 237 (484)
Q Consensus 161 a-lp~g~v~~v~g~~-~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~ 237 (484)
+ +|+|++|+++|+. +.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++
T Consensus 197 aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~---dADl~~Aa~ 273 (485)
T 4dng_A 197 AGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRAFKRMALELGGNNPFAVLS---DADVDRAVD 273 (485)
T ss_dssp TTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHHHHHHTCEEEEEECCCEEEEECT---TSCHHHHHH
T ss_pred hCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHHHhhhccchhhhcCCCCceEEcC---CCCHHHHHH
Confidence 9 9999999999955 5899999997 99999999999999999999999999999999999999999 999999999
Q ss_pred HHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCce
Q 038617 238 RIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAI 315 (484)
Q Consensus 238 ~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~ 315 (484)
.+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ |+++
T Consensus 274 ~i~~~~~~-~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v 352 (485)
T 4dng_A 274 AAIFGKFI-HQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIEL 352 (485)
T ss_dssp HHHHHHTT-CC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHh-cCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCCcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEE
Confidence 99999999 99999999999999999999999999999999999999 889999999999999999999999874 6899
Q ss_pred eeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccce
Q 038617 316 VHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTSS 395 (484)
Q Consensus 316 ~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~ 395 (484)
++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++
T Consensus 353 ~~gg~~--~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~ 430 (485)
T 4dng_A 353 AVEGKR--VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDS 430 (485)
T ss_dssp EECCCE--ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCS
T ss_pred EeCCCC--CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCc
Confidence 999975 689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 396 GSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 396 g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
|+|+||+++.+ ..+.+||||+|.||+|+++|.+++++|++.|+|+++.
T Consensus 431 G~v~vN~~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 478 (485)
T 4dng_A 431 GMTHVNDQSVN-DSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQK 478 (485)
T ss_dssp SEEEESCC-----------------------CHHHHHHHEEEEEEEEEC
T ss_pred ceEEECCCCCC-CCCCCCcCCcCCCCCCccchHHHHHHhhceEEEEEec
Confidence 99999998754 5788999999999999999999999999999998874
No 37
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=1.7e-93 Score=746.07 Aligned_cols=427 Identities=26% Similarity=0.351 Sum_probs=400.0
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++||+.|+.++.++|.++|++++++|+++.++|++++++|+|||..++. .|+..+++.+++++..
T Consensus 36 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~ 114 (475)
T 1euh_A 36 AMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAV-SEVVRTAEIINYAAEE 114 (475)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999996 5999999999999998
Q ss_pred HHHhhcCccccCccccCC----Ccc-eEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHH
Q 038617 82 LDKWMAPKKRRLPLLFFP----ASG-EVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAE 156 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~----~~~-~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~ 156 (484)
.+++.+... ... ..+ ... +++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..|++
T Consensus 115 ~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ 191 (475)
T 1euh_A 115 GLRMEGEVL-EGG--SFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAE 191 (475)
T ss_dssp HTTCCEEEE-EGG--GTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHH
T ss_pred HHHhcCCcc-cCC--CCCccccceeeEEEEeccceEEEECCCCchHHHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHH
Confidence 877654321 111 122 345 889999999999999999999999999999999999999999999999999999
Q ss_pred Hhccc-cCccceeeccCC-hhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHH
Q 038617 157 TIPLY-LDCKAIKVTNGG-VDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIK 233 (484)
Q Consensus 157 ~l~~a-lp~g~v~~v~g~-~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~ 233 (484)
++.++ +|+|++|+++|+ .+.++.|++|+ ||+|+||||+.+|+.|++.++ +||+++|+|||||+||++ |||++
T Consensus 192 ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa--~~~v~lElGGk~p~iV~~---dADl~ 266 (475)
T 1euh_A 192 AFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVLE---DADLE 266 (475)
T ss_dssp HHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTT--TSCEEEECCCCEEEEECT---TSCHH
T ss_pred HHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHHHhcC--CCcEEEEcCCcCeEEECC---CCCHH
Confidence 99999 999999999995 56899999997 999999999999999999887 899999999999999999 99999
Q ss_pred HHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-
Q 038617 234 VTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV- 311 (484)
Q Consensus 234 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~- 311 (484)
.|++.+++++|. |+||.|++++|||||+++||+|+++|+++++++++||| + ++++||++++.+++++.++++++.+
T Consensus 267 ~aa~~i~~~~~~-n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpli~~~~~~~v~~~i~~a~~~ 344 (475)
T 1euh_A 267 LTAKNIIAGAFG-YSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPED-DADITPLIDTKSADYVEGLINDANDK 344 (475)
T ss_dssp HHHHHHHHHHHG-GGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGG-TCSBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhh-cCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCccc-cCccCCCCCHHHHHHHHHHHHHHHHC
Confidence 999999999999 99999999999999999999999999999999999999 6 9999999999999999999999864
Q ss_pred CCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhh
Q 038617 312 ADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVS 391 (484)
Q Consensus 312 ~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~ 391 (484)
|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++
T Consensus 345 Ga~~~~gG~~--~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~~~~~~ 422 (475)
T 1euh_A 345 GATALTEIKR--EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAE 422 (475)
T ss_dssp TCEECSCCCE--ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHH
T ss_pred CCEEEeCCcc--CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHH
Confidence 6788999865 58999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeEEECC-CccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 392 GTSSGSLIFND-TLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 392 ~l~~g~v~iN~-~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
++++|+|+||+ +..+ .+.+||||+|.||+|+++|.+|+++|++.|+|+.+
T Consensus 423 ~l~~G~v~vN~~~~~~--~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~ 473 (475)
T 1euh_A 423 QLEVGTVHINNKTQRG--TDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFD 473 (475)
T ss_dssp HSCSSEEEESSCCCCC--STTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred hCCEeeEEECCCCCCC--CCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEEEe
Confidence 99999999998 6543 57899999999999999999999999999999875
No 38
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=4.6e-93 Score=744.32 Aligned_cols=433 Identities=23% Similarity=0.309 Sum_probs=401.5
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+++|.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++.+++++..
T Consensus 39 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~ 117 (486)
T 1t90_A 39 ISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEELAHLITIENGKNTKEAL-GEVGRGIENVEFAAGA 117 (486)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHTTH
T ss_pred CCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478899999999999999999999999999999999999999999999999999999999987 5999999999998865
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+.+ .++.... ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|++++.++
T Consensus 118 ~~~~-~g~~~~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~a 194 (486)
T 1t90_A 118 PSLM-MGDSLAS--IATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKA 194 (486)
T ss_dssp HHHH-CEEEEEE--EETTEEEEEEEEECSEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHT
T ss_pred HHHh-cCccccc--CCCCceeEEEecccCEEEEECCCchhHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh
Confidence 5443 3222111 112335678999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHH
Q 038617 162 -LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRI 239 (484)
Q Consensus 162 -lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i 239 (484)
+|+|++|+++|+.+.++.|++|+ ||+|+||||+.+|+.|++.+++++||+++|+|||||+||++ |||++.|++.+
T Consensus 195 GlP~gvv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa~~~~pv~lElGGk~p~iV~~---dADl~~Aa~~i 271 (486)
T 1t90_A 195 GLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAKNHTIVLN---DANLEDTVTNI 271 (486)
T ss_dssp TCCTTSEEECCCSHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECT---TSCHHHHHHHH
T ss_pred CCCCCEEEEEECCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHhccCCcEEeccCCCCcEEECC---CCCHHHHHHHH
Confidence 99999999999878899999998 99999999999999999999999999999999999999999 99999999999
Q ss_pred HHhhcccCCCCccccCCc-eEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc-CCcee
Q 038617 240 IGGKFASCNGQVCVGVDY-ILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV-ADAIV 316 (484)
Q Consensus 240 ~~~~~~~~~Gq~C~a~~~-v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~~~ 316 (484)
++++|. |+||.|++++| +|||++ +|+|+++|+++++++++|+| ++++++||++++.+++++.++++++.+ |++++
T Consensus 272 ~~~~~~-n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~ 349 (486)
T 1t90_A 272 VGAAFG-SAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLV 349 (486)
T ss_dssp HHHHHG-GGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHh-CCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEE
Confidence 999999 99999999999 999999 99999999999999999998 889999999999999999999999864 78999
Q ss_pred eCCCcC--CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccc
Q 038617 317 HGGLLD--KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTS 394 (484)
Q Consensus 317 ~gg~~~--~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~ 394 (484)
+||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++++
T Consensus 350 ~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~ 429 (486)
T 1t90_A 350 CDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENID 429 (486)
T ss_dssp ECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHHSSEESEEEEECCBHHHHHHHHHHCC
T ss_pred eCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCC
Confidence 998642 368999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEECCCccccCCCCCCcccCCCCCCC--CcchHHHHHHhhhccEEEEec
Q 038617 395 SGSLIFNDTLVQQLCDVLPFGGVGQSGIG--RYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 395 ~g~v~iN~~~~~~~~~~~pfGG~~~SG~G--~~~g~~~~~~f~~~k~v~~~~ 444 (484)
+|+|+||++.. ...+.+||||+|.||+| +++|.+|+++|++.|+|+.+.
T Consensus 430 aG~v~vN~~~~-~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~~~ 480 (486)
T 1t90_A 430 AGMLGINLGVP-APMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARY 480 (486)
T ss_dssp CSEEEESCSCC-CCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEEEC
T ss_pred cCeEEECCCCC-CCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEEec
Confidence 99999998643 34578999999999999 899999999999999998763
No 39
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=2.3e-93 Score=746.25 Aligned_cols=425 Identities=29% Similarity=0.433 Sum_probs=379.8
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..+++..|+..+++.++++++.
T Consensus 41 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~ 120 (478)
T 3ty7_A 41 KGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDA 120 (478)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999556999999999999998
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
++++.... .....+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|++++.++
T Consensus 121 ~~~~~~~~--------~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~a 192 (478)
T 3ty7_A 121 LDNYEFEE--------RRGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKV 192 (478)
T ss_dssp HHHCCSEE--------EETTEEEEEEECCCEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHH
T ss_pred HHHhhccc--------CCccceEEecCceEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHh
Confidence 88765422 1235688999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+|+|++|+++| +.+.++.|++|+ ||+|+||||+.+|+.|++.++++++|+++|+|||||+||++ |||++.|++.
T Consensus 193 GlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~~---dADl~~Aa~~ 269 (478)
T 3ty7_A 193 GVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAKDFKKVSLELGGKSPYIVLD---DVDIKEAAKA 269 (478)
T ss_dssp TCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTTTTTCEEECCCCCCCEEEECT---TSCHHHHHHH
T ss_pred CcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCceEEecCCCCCcccCC---CCCHHHHHHH
Confidence 99999999999 668999999997 99999999999999999999999999999999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchh-cCCcee
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPL-VADAIV 316 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~-~~~~~~ 316 (484)
+++++|. |+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+++++.++++++. +|++++
T Consensus 270 i~~~~~~-~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~ 348 (478)
T 3ty7_A 270 TTGKVVN-NTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELF 348 (478)
T ss_dssp HHHHHHG-GGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHH-hCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEE
Confidence 9999999 99999999999999999999999999999999999999 88999999999999999999999986 478999
Q ss_pred eCCCc-C---CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhc
Q 038617 317 HGGLL-D---KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSG 392 (484)
Q Consensus 317 ~gg~~-~---~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~ 392 (484)
+||.. + ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+++++++
T Consensus 349 ~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~ 428 (478)
T 3ty7_A 349 YGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARS 428 (478)
T ss_dssp ECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHH
T ss_pred ecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHh
Confidence 99842 2 3689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 038617 393 TSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIM 441 (484)
Q Consensus 393 l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~ 441 (484)
+++|+|+||+ .. ..+.+||||+|.||+|+++|++|+++||+.|+|+
T Consensus 429 l~~G~v~vN~-~~--~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~ 474 (478)
T 3ty7_A 429 IEAGTVEINE-AG--RKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIA 474 (478)
T ss_dssp SCSSEEEETT-CC------------------------CCGGGEEEEEEE
T ss_pred CCcCeEEECC-CC--CCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEE
Confidence 9999999998 32 4678999999999999999999999999999986
No 40
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=5e-92 Score=743.98 Aligned_cols=444 Identities=19% Similarity=0.230 Sum_probs=406.3
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhc-HHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDN-EDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALS 80 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~-~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~ 80 (484)
.++.+|+++|+++|++||+.|+.++.++|.++|++++++|+++ +++|+.++++|+||+..++..+|+..+++.+++++.
T Consensus 96 ~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~ 175 (563)
T 4e3x_A 96 YADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAK 175 (563)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999 999999999999999999987449999999999999
Q ss_pred HHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhcc
Q 038617 81 CLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPL 160 (484)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~ 160 (484)
.++++.+.+.... ......+.++.|+|||++|+|||||+....+++++|| +||+||+|||+.+|+++..|++++.+
T Consensus 176 ~~~~~~~~~~~~~---~~~~~~~~~r~p~GVV~~I~PwNfP~~~~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~e 251 (563)
T 4e3x_A 176 FAVELEGEQPISV---PPSTNHTVYRGLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILRE 251 (563)
T ss_dssp HHHHHTTCCCCCC---TTEEEEEECCBCSSEEEEECCSSCHHHHHHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHH
T ss_pred HHHHhhCCCccCC---CCCcceEEEecCceEEEEECCchHHHHHHHHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHH
Confidence 9988866432211 1122345677888999999999999999999999999 59999999999999999999999999
Q ss_pred c-cCccceeeccCC-hhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCc------eeeecCCcCceEEcCCCCCCC
Q 038617 161 Y-LDCKAIKVTNGG-VDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTP------VTLELGGKCPAILDTLSSPLD 231 (484)
Q Consensus 161 a-lp~g~v~~v~g~-~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~------~~lelgG~~p~iV~~~~~daD 231 (484)
+ +|+|+||+|+|+ .+.++.|++|+ ||+|+||||+.+|+.|.+.+++++|| +++|+|||||+||++ |||
T Consensus 252 AGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~aa~~lk~~~~~prv~lElGGk~p~IV~~---dAD 328 (563)
T 4e3x_A 252 AGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHS---SAD 328 (563)
T ss_dssp TTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHHHHHTTTTCSSCCEEEEECCCCEEEEECT---TSC
T ss_pred hCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCccccCCceeccCCCCCceeeCC---CCC
Confidence 9 999999999995 56899999997 99999999999999999999999885 999999999999999 999
Q ss_pred HHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC--CCCCccccccCHHHHHHHHHHhhch
Q 038617 232 IKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP--KDSKSISRIINEYHFERLRKLLKDP 309 (484)
Q Consensus 232 l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~--~~~~~~gpli~~~~~~~~~~~i~~a 309 (484)
++.|++.+++++|. |+||.|++++|+|||+++||+|+++|+++++++++||| ++++++||++++.+++++.++|+++
T Consensus 329 ld~Aa~~iv~~~f~-~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a 407 (563)
T 4e3x_A 329 VDSVVSGTLRSAFE-YGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHA 407 (563)
T ss_dssp HHHHHHHHHHHHHG-GGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-cCCCCCcCCcEEEEecchHHHHHHHHHHHHHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999 99999999999999999999999999999999999987 6789999999999999999999998
Q ss_pred h--cCCceeeCCCcC-CCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCC--HHHHHHHH-hcCCCCceEEEecCCH
Q 038617 310 L--VADAIVHGGLLD-KENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNN--IQESIEFI-NSRPKPLAIYAFTKDE 383 (484)
Q Consensus 310 ~--~~~~~~~gg~~~-~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~a~v~t~d~ 383 (484)
. +++++++||..+ ..|+|++|||+.+++++|++++||+||||++|++|+| +||||+++ |+++|||+++|||+|.
T Consensus 408 ~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~ 487 (563)
T 4e3x_A 408 RSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDK 487 (563)
T ss_dssp HHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCH
T ss_pred hhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCH
Confidence 7 367899999753 4699999999999999999999999999999999997 79999999 7999999999999999
Q ss_pred HHHHHHhhccc--eeeEEECCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEecCcCCCCCCCC
Q 038617 384 TFKKQIVSGTS--SGSLIFNDTLVQQLCDVLPFGGVGQSGIG-RYHGHYSFETFSHEKAIMQRSFFLELEPRYP 454 (484)
Q Consensus 384 ~~~~~~~~~l~--~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~~~~~~~~~~~~ 454 (484)
+.+++++++++ +|+|+||+.+++...+.+||||+|.||+| +.+|++++++|++.|+|... +..+..++||
T Consensus 488 ~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~G~~~l~~~~~~k~v~~~-~~~~~~~~yp 560 (563)
T 4e3x_A 488 AIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGGPHYILRWTSPQVIKET-HKPLGDWRYS 560 (563)
T ss_dssp HHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCTTSTTGGGGGBCCEEEEEE-CSCCCCSSCT
T ss_pred HHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCccCCHHHHHHhCceEEEEEe-CcCCCcccCC
Confidence 99999999965 99999999876656788999999999998 88999999999999999876 3334456665
No 41
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=6e-90 Score=765.47 Aligned_cols=435 Identities=21% Similarity=0.291 Sum_probs=408.7
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.+++++..
T Consensus 564 ~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~~~eLa~~~~~E~GK~~~ea~~-Ev~~aid~lr~~a~~ 642 (1026)
T 4f9i_A 564 QAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAYA-DVTEAIDFLEYYARE 642 (1026)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHH-HHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999999999975 999999999999999
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+++..+..... ..+....+.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++.++
T Consensus 643 ~~~~~~~~~~~~---~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eA 719 (1026)
T 4f9i_A 643 MIRLGQPQRVGH---APGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREA 719 (1026)
T ss_dssp HHHHTSCEEECC---CTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHT
T ss_pred HHHhcCCccccC---CCCccceeEeecCceEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHh
Confidence 988765432211 23446778999999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHh------cccCceeeecCCcCceEEcCCCCCCCH
Q 038617 162 -LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAA------KHLTPVTLELGGKCPAILDTLSSPLDI 232 (484)
Q Consensus 162 -lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~------~~~~~~~lelgG~~p~iV~~~~~daDl 232 (484)
+|+|++|+|+| +.++++.|++|+ ||.|+||||+.+|+.|.+.++ +++||+++|+|||||+||++ |||+
T Consensus 720 GlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV~~---dADl 796 (1026)
T 4f9i_A 720 GLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDD---DADL 796 (1026)
T ss_dssp TCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECT---TCCH
T ss_pred CcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHhhcccccccCccceEEecCCCCeEEECC---CCCH
Confidence 99999999999 557899999998 999999999999999999988 57899999999999999999 9999
Q ss_pred HHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhc
Q 038617 233 KVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLV 311 (484)
Q Consensus 233 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~ 311 (484)
+.|++.+++|+|. |+||.|++++|+|||++++|+|+++|+++++++++|+| ++++++||+|++.+++++.++|+++.+
T Consensus 797 d~Aa~~iv~saf~-~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~ 875 (1026)
T 4f9i_A 797 DEAVPHVLYSAFG-FQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKR 875 (1026)
T ss_dssp HHHHHHHHHHHHG-GGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-CCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccCCcccccCccccccCHHHHHHHHHHHHHHHh
Confidence 9999999999999 99999999999999999999999999999999999999 889999999999999999999999876
Q ss_pred CCceeeCCCcCCC-CCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHh
Q 038617 312 ADAIVHGGLLDKE-NLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIV 390 (484)
Q Consensus 312 ~~~~~~gg~~~~~-g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 390 (484)
.+++++||..+.. |+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+++++
T Consensus 876 ~G~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~ 955 (1026)
T 4f9i_A 876 EGHVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKAR 955 (1026)
T ss_dssp HSEEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHH
T ss_pred CCeEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHH
Confidence 5599999976554 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccceeeEEECCCccccCCCCCCcccCCCCCCCC-cchHHHHHHhhhccEEEEec
Q 038617 391 SGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIGR-YHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 391 ~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~-~~g~~~~~~f~~~k~v~~~~ 444 (484)
+++++|+|+||+.+++...+.+||||+|.||+|+ .+|++++++|++.|+|..+.
T Consensus 956 ~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~k~v~~~~ 1010 (1026)
T 4f9i_A 956 REFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVVTENT 1010 (1026)
T ss_dssp HHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGEEEEEEEEEC
T ss_pred HhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhceEEEEEEec
Confidence 9999999999998876667889999999999995 57999999999999998875
No 42
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=6.4e-90 Score=721.27 Aligned_cols=426 Identities=22% Similarity=0.319 Sum_probs=396.8
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..+++ .|+..+++.++++++.
T Consensus 38 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~ 116 (490)
T 3ju8_A 38 GADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELARVIGEETGKPLWESA-TEVTSMVNKVAISVQA 116 (490)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999997 5999999999999988
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+.+.+.... ...+....++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|++++.++
T Consensus 117 ~~~~~~~~~~----~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~a 192 (490)
T 3ju8_A 117 FRERTGEKSG----PLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQA 192 (490)
T ss_dssp HHHHSCCEEE----EETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred HHHhcCCccc----cCCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHh
Confidence 8776543321 112334567799999999999999999999999999999999999999999999999999999999
Q ss_pred -cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCce-eeecCCcCceEEcCCCCCCCHHHHHHH
Q 038617 162 -LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPV-TLELGGKCPAILDTLSSPLDIKVTVKR 238 (484)
Q Consensus 162 -lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~-~lelgG~~p~iV~~~~~daDl~~aa~~ 238 (484)
+|+|++|+++|+.+.++.|++|+ ||+|+||||+.+|+.|++.++++++|+ ++|+|||||+||++ |||++.|++.
T Consensus 193 GlP~gvv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~~lElGGk~p~iV~~---dADl~~Aa~~ 269 (490)
T 3ju8_A 193 GLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEMGGNNPLVVEE---VADLDAAVYT 269 (490)
T ss_dssp TCCTTTEEECCCSHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTTCTTSEEEEECCCCEEEEECC---CSCHHHHHHH
T ss_pred CcCcCeEEEEeCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhccCCCcEEeecCCCCeEEECC---CCCHHHHHHH
Confidence 99999999999888999999997 999999999999999999999999998 79999999999999 9999999999
Q ss_pred HHHhhcccCCCCccccCCceEEccch-HHHHHHHHHHHHHhhcCCC-C-CCCCccccccCHHHHHHHHHHhhchhc-CCc
Q 038617 239 IIGGKFASCNGQVCVGVDYILVEKKF-AATLIESLKTTIKKFYGEN-P-KDSKSISRIINEYHFERLRKLLKDPLV-ADA 314 (484)
Q Consensus 239 i~~~~~~~~~Gq~C~a~~~v~V~~~i-~~~f~~~l~~~~~~~~~g~-~-~~~~~~gpli~~~~~~~~~~~i~~a~~-~~~ 314 (484)
+++++|. |+||.|++++|+|||+++ ||+|+++|+++++++++|+ | ++++++||++++.+++++.++++++.+ |++
T Consensus 270 i~~~~~~-n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~ 348 (490)
T 3ju8_A 270 IIQSAFI-SAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQ 348 (490)
T ss_dssp HHHHHHG-GGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHh-cCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCcCccccccCHHHHHHHHHHHHHHHHCCCE
Confidence 9999999 999999999999999996 9999999999999999998 7 889999999999999999999999864 789
Q ss_pred eeeCCCc-CCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcc
Q 038617 315 IVHGGLL-DKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGT 393 (484)
Q Consensus 315 ~~~gg~~-~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l 393 (484)
+++||.. +.+|+|++|||+. ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++
T Consensus 349 ~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l 427 (490)
T 3ju8_A 349 PLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVES 427 (490)
T ss_dssp EEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHC
T ss_pred EEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhc
Confidence 9999865 3579999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeEEECCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEec
Q 038617 394 SSGSLIFNDTLVQQLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 394 ~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~~ 444 (484)
++|+|+||+++.+ ..+.+||||+|.||.+ ++++|++.|+|+...
T Consensus 428 ~aG~v~vN~~~~~-~~~~~PfGG~~~SG~~------~~~~~~~~k~v~~~~ 471 (490)
T 3ju8_A 428 RAGIVNWNKQLTG-AASSAPFGGIGASGNH------RPSAYYAADYCAYPV 471 (490)
T ss_dssp CSSEEEESSCSSC-CCTTSEECCCGGGBSS------CCEETTHHHHHEEEE
T ss_pred CcceEEECCCcCC-CCCCCCcCCccccchh------HHHhhheeEEEEEec
Confidence 9999999997653 4578999999999974 479999999987764
No 43
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=4.5e-88 Score=748.88 Aligned_cols=433 Identities=21% Similarity=0.320 Sum_probs=402.8
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||..|+.+|.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++.+++++..
T Consensus 546 ~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~-~Ev~~ai~~lr~~a~~ 624 (1001)
T 3haz_A 546 DATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDAL-SELREAADFCRYYAAQ 624 (1001)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHH-HHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHH-HHHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999997 4999999999999999
Q ss_pred HHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccc
Q 038617 82 LDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLY 161 (484)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~a 161 (484)
.+.+.+.... .+ ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 625 a~~~~g~~~~-~~-~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~eA 702 (1001)
T 3haz_A 625 GRKLFGSETA-MP-GPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEA 702 (1001)
T ss_dssp HHHHHSSCEE-CC-CCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred HHhhcCcccc-cc-CCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHHh
Confidence 8887543211 11 123456788999999999999999999999999999999999999999999999999999999998
Q ss_pred -cCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcc---cCceeeecCCcCceEEcCCCCCCCHHHHH
Q 038617 162 -LDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKH---LTPVTLELGGKCPAILDTLSSPLDIKVTV 236 (484)
Q Consensus 162 -lp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~---~~~~~lelgG~~p~iV~~~~~daDl~~aa 236 (484)
+|+|++|+++|+.+.+..|++|+ ||.|+||||+.+|+.|++.++++ ++|+++|+|||||+||++ |||++.|+
T Consensus 703 GlP~gvv~vV~G~g~~g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~---dADld~Aa 779 (1001)
T 3haz_A 703 GIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADA---TALPEQVA 779 (1001)
T ss_dssp TCCTTTEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECT---TSCHHHHH
T ss_pred CcCcCcEEEEecCchHHHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcC---CCCHHHHH
Confidence 99999999999655599999998 99999999999999999988864 799999999999999999 99999999
Q ss_pred HHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHHHHhhchhcCCce
Q 038617 237 KRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLRKLLKDPLVADAI 315 (484)
Q Consensus 237 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~ 315 (484)
+.+++|+|. |+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+.+++.++|+++.+++++
T Consensus 780 ~~iv~s~f~-naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g~v 858 (1001)
T 3haz_A 780 DDVVTSAFR-SAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEARL 858 (1001)
T ss_dssp HHHHHHHHG-GGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHSEE
T ss_pred HHHHHHHHh-CCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcCeE
Confidence 999999999 99999999999999999999999999999999999999 8999999999999999999999998765688
Q ss_pred eeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCC--HHHHHHHHhcCCCCceEEEecCCHHHHHHHhhcc
Q 038617 316 VHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNN--IQESIEFINSRPKPLAIYAFTKDETFKKQIVSGT 393 (484)
Q Consensus 316 ~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~--~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l 393 (484)
+||..+..|+|+.|||+.+ +++.+++||+||||++|++|++ +||||+++|+++|||++||||+|.++++++++++
T Consensus 859 -~gg~~~~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l 935 (1001)
T 3haz_A 859 -HFAGPAPEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRV 935 (1001)
T ss_dssp -EEECCCCSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHC
T ss_pred -eccccCCCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhC
Confidence 8888776799999999985 6788999999999999999996 7999999999999999999999999999999999
Q ss_pred ceeeEEECCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEec
Q 038617 394 SSGSLIFNDTLVQQLCDVLPFGGVGQSGIG-RYHGHYSFETFSHEKAIMQRS 444 (484)
Q Consensus 394 ~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G-~~~g~~~~~~f~~~k~v~~~~ 444 (484)
++|+|+||+.+.+...+.+||||+|.||+| +.+|++++++|++.|+|+++.
T Consensus 936 ~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 936 QVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINT 987 (1001)
T ss_dssp CCSEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEEC
T ss_pred CeeeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECC
Confidence 999999999887666678999999999999 567899999999999998875
No 44
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=1.8e-88 Score=717.42 Aligned_cols=433 Identities=17% Similarity=0.218 Sum_probs=387.5
Q ss_pred CCHHHHHHHHHHHHHH-hHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 3 AAMGEIEDKLAELRQT-FRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 3 ~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
++ +|+++|+++|++| |+.|+.++.++|.++|++++++|++++++|++++++|+|||..++.. |+..+++.+++++..
T Consensus 41 ~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~ 118 (534)
T 2y53_A 41 EG-LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAV-DIDGGIFTLSYYAKL 118 (534)
T ss_dssp TT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHH
T ss_pred CH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHH
Confidence 45 8999999999999 59999999999999999999999999999999999999999999975 999999999999888
Q ss_pred HHHhhcCcc---cc-CccccCCC-cceEEeecc-eEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHH
Q 038617 82 LDKWMAPKK---RR-LPLLFFPA-SGEVVSEPF-GVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLA 155 (484)
Q Consensus 82 ~~~~~~~~~---~~-~~~~~~~~-~~~~~~~P~-GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~ 155 (484)
.+++..... .. .+....+. ...+.++|+ |||++|+|||||+.++++++++||++||+||+|||+.+|+++..|+
T Consensus 119 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~ 198 (534)
T 2y53_A 119 GASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMV 198 (534)
T ss_dssp HHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTTCTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHH
T ss_pred HHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHH
Confidence 765432110 00 01111111 347789997 9999999999999999999999999999999999999999999999
Q ss_pred HHhccc--cCccceeeccCChhHHHHHHhC--CCCeEEEeCChHHHHHHHHHHh--cccCceeeecCCcCceEEcCCCCC
Q 038617 156 ETIPLY--LDCKAIKVTNGGVDVCEQLLQQ--KWNKIFFTGSPRVGSIVMSAAA--KHLTPVTLELGGKCPAILDTLSSP 229 (484)
Q Consensus 156 ~~l~~a--lp~g~v~~v~g~~~~~~~L~~~--~vd~v~ftGs~~~g~~i~~~a~--~~~~~~~lelgG~~p~iV~~~~~d 229 (484)
+++.++ +|+|++|+|+|+.. .+.++ .+|+|+||||+.+|+.|++.++ +++||+++|||||||+||++ |
T Consensus 199 ~l~~~aG~lP~gvv~vv~g~~~---~l~~~l~~vd~V~FTGS~~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~---d 272 (534)
T 2y53_A 199 ADVVDAGILPPGALSIICGSSA---GLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSLNSAILCA---D 272 (534)
T ss_dssp HHHHHHTCSCTTSEEECCSCCT---TSGGGCCTTCEEEEESCHHHHHHHHTSHHHHTTCCEEEEECCCCEEEEECT---T
T ss_pred HHHHHhCCCCCCeEEEEeCChH---HHHhcccccCEEEEECCHHHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECC---C
Confidence 999997 59999999998432 23443 4899999999999999998764 88999999999999999999 9
Q ss_pred C-----CHHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCC-CCCCccccccCHHHHHHHH
Q 038617 230 L-----DIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENP-KDSKSISRIINEYHFERLR 303 (484)
Q Consensus 230 a-----Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~~~ 303 (484)
| |++.|++.+++++|. |+||.|++++|||||+++||+|+++|+++++++++||| ++++++||++++.+++++.
T Consensus 273 A~~~~~Dl~~Aa~~i~~~~~~-n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~ 351 (534)
T 2y53_A 273 ATPDTPAFDLFIKEVVREMTV-KSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVL 351 (534)
T ss_dssp CCTTSHHHHHHHHHHHHHHHG-GGGCCTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHH
T ss_pred ccccccCHHHHHHHHHHHHHh-CCCCcccCCCEEEEeccHHHHHHHHHHHHHHhccCCCCCcCCCCccCCCCHHHHHHHH
Confidence 9 999999999999999 99999999999999999999999999999999999999 8899999999999999999
Q ss_pred HHhhchhcCCceeeCCCcC-------CCCCeeeeEEEeCCCCC--CcccccceecceeeeeeeC---CH-----HHHHHH
Q 038617 304 KLLKDPLVADAIVHGGLLD-------KENLFIEPTILLDPPLD--AEIMTEEIFGPILPIITLN---NI-----QESIEF 366 (484)
Q Consensus 304 ~~i~~a~~~~~~~~gg~~~-------~~g~~~~Ptil~~~~~~--~~i~~eE~fgPvl~v~~~~---~~-----~eai~~ 366 (484)
++|+++.+++++++||... ..|+|++|||+.+++++ |++++||+||||++|++|+ |+ ||||++
T Consensus 352 ~~i~~a~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~ 431 (534)
T 2y53_A 352 AGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVAL 431 (534)
T ss_dssp HHHHHHHTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSSTTTCCCSSSEEEEEEECCCCC---CTTHHHHHH
T ss_pred HHHHHHHcCCEEEECCcccccccccCCCCceecCEEEEecCccccCHHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHH
Confidence 9999986678999998642 35899999999999987 6899999999999999999 99 999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHhhcc--ceeeEEECCCccc-------cCCCCCCcccCCCCCCCCc-chHHHHHHhhh
Q 038617 367 INSRPKPLAIYAFTKDETFKKQIVSGT--SSGSLIFNDTLVQ-------QLCDVLPFGGVGQSGIGRY-HGHYSFETFSH 436 (484)
Q Consensus 367 ~n~~~~gl~a~v~t~d~~~~~~~~~~l--~~g~v~iN~~~~~-------~~~~~~pfGG~~~SG~G~~-~g~~~~~~f~~ 436 (484)
+|+++|||++||||+|.++++++++++ ++|+|+||++... ...+.+||||+|.||+|++ +|.+++++|++
T Consensus 432 aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~ 511 (534)
T 2y53_A 432 ARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHR 511 (534)
T ss_dssp HHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCCSSCCCTTSEECCSGGGCSCCEESGGGGGGGGEE
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccccCCCCCCCCCCCcccCCCCCCcchHHHHHHHhh
Confidence 999999999999999999999999999 8999999986421 2357899999999999999 69999999999
Q ss_pred ccEEEEec
Q 038617 437 EKAIMQRS 444 (484)
Q Consensus 437 ~k~v~~~~ 444 (484)
.|++...+
T Consensus 512 ~k~v~~~p 519 (534)
T 2y53_A 512 RSAIQAAS 519 (534)
T ss_dssp EEEEEEEH
T ss_pred hheeecCH
Confidence 99987754
No 45
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.2e-86 Score=699.28 Aligned_cols=425 Identities=18% Similarity=0.176 Sum_probs=384.8
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..+++ .|+..+++.++++++.
T Consensus 59 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~ 137 (528)
T 3v4c_A 59 VGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEARAEAITEIGSQETGLPEARLN-GERGRTTGQLRLFADH 137 (528)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999987 4999999999999999
Q ss_pred HHH--hhcCccccC-cc--ccCCCcceEEeecceEEEEEccCchhHHHHH--hHHHHHHhhCCEEEEeCCcccHHHHHHH
Q 038617 82 LDK--WMAPKKRRL-PL--LFFPASGEVVSEPFGVVLICSAWNFPINLAL--EPLIGAIAAGNTVMLKPSELAVECASFL 154 (484)
Q Consensus 82 ~~~--~~~~~~~~~-~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~--~~i~~ALaaGN~Vvlkps~~~~~t~~~l 154 (484)
+++ +..+..... +. ...+...+++++|+|||++|+|||||+.+.+ +++++||++||+||+|||+.+|.|+..+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l 217 (528)
T 3v4c_A 138 IEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIV 217 (528)
T ss_dssp HHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHH
T ss_pred HhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHH
Confidence 887 433321100 00 0122346789999999999999999999865 8999999999999999999999999999
Q ss_pred HHHhc----cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccc--CceeeecCCcCceEEcC
Q 038617 155 AETIP----LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHL--TPVTLELGGKCPAILDT 225 (484)
Q Consensus 155 ~~~l~----~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~--~~~~lelgG~~p~iV~~ 225 (484)
++++. ++ +|+|++|+|+| +.+.++.|++|+ ||+|+||||+.+|+.|++.+++++ ||+++|+|||||+||++
T Consensus 218 ~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~fTGS~~~G~~i~~~aa~~~~~~pv~lElGGk~p~iV~~ 297 (528)
T 3v4c_A 218 AEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLP 297 (528)
T ss_dssp HHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEECCCCCCEEECH
T ss_pred HHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECChHHHHHHHHHHhhccCCCceEEecCCCCeEEECC
Confidence 99765 45 99999999999 668999999998 999999999999999999999999 99999999999999999
Q ss_pred CCCCC---CHHHHHHHHHHhhcccCCCCccccCCceEEccc-hHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHH
Q 038617 226 LSSPL---DIKVTVKRIIGGKFASCNGQVCVGVDYILVEKK-FAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFER 301 (484)
Q Consensus 226 ~~~da---Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~ 301 (484)
|| |++.|++.+++++|. |+||.|++++|||||++ +||+|+++|++++++++. ++.+||++++.+.++
T Consensus 298 ---dAd~~dl~~Aa~~i~~~~~~-n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~-----~~~~gp~~~~~~~~~ 368 (528)
T 3v4c_A 298 ---EALKARAETLGQGWAGSLTM-GAGQFCTNPGIAVVIEGADADRFTTAAVEALAKVAP-----QTMLTDGIAKAYRDG 368 (528)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHG-GGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHTCCC-----EECSCHHHHHHHHHH
T ss_pred ---CCChhhHHHHHHHHHHHHHh-cCCCccccCcEEEEecccHHHHHHHHHHHHHHhccc-----CCCCCHHHHHHHHHH
Confidence 99 889999999999999 99999999999999997 999999999999998754 367999999998888
Q ss_pred HHHHhhchhcCCceeeCCCcCCCCCeeeeEEEeCCCCC---CcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEE
Q 038617 302 LRKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLD---AEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYA 378 (484)
Q Consensus 302 ~~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptil~~~~~~---~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v 378 (484)
+.+++++ +|+++++||.. .|+|++|||+.+++++ |++++||+||||++|++|+|+||||+++|+++|||++||
T Consensus 369 v~~~~~~--~Ga~v~~gG~~--~g~~~~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v 444 (528)
T 3v4c_A 369 QARFATR--NAVKPLLATES--SGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATI 444 (528)
T ss_dssp HHHHHTC--TTCEEEECCCC--CTTEECCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEE
T ss_pred HHHHHHh--CCCEEEeCCCc--CCceeccEEEEecCcccccChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEE
Confidence 8888863 37899999975 6999999999988877 899999999999999999999999999999999999999
Q ss_pred ecC--CHHHHHHHhhccc--eeeEEECCCccc-cCCCCCCccc-CCCCCCCCcc--hHHHHHHhhhccEE
Q 038617 379 FTK--DETFKKQIVSGTS--SGSLIFNDTLVQ-QLCDVLPFGG-VGQSGIGRYH--GHYSFETFSHEKAI 440 (484)
Q Consensus 379 ~t~--d~~~~~~~~~~l~--~g~v~iN~~~~~-~~~~~~pfGG-~~~SG~G~~~--g~~~~~~f~~~k~v 440 (484)
||+ |.+++++++++++ +|+|+||+.+++ ...+.+|||| +|.||+|+++ |++|+++|++.|++
T Consensus 445 ~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pfGG~~~~Sg~gr~~~~G~~gl~~~~~~k~~ 514 (528)
T 3v4c_A 445 HMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLRPVAY 514 (528)
T ss_dssp ECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCCCCTTTTBSCTTCCSSSGGGGGGGEEEEEE
T ss_pred EcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCCCCCCCCCCCCCCCCCcHHHHHHhchhHHh
Confidence 999 8999999999998 999999996643 2468899999 9999999986 99999999998864
No 46
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=5.9e-85 Score=686.92 Aligned_cols=423 Identities=17% Similarity=0.180 Sum_probs=378.8
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++.++++++.
T Consensus 26 ~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~Ev~~~~~~~~~~a~~ 104 (510)
T 1ez0_A 26 VHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRLT-GEIARTANQLRLFADV 104 (510)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999998886 4999999999999998
Q ss_pred HHH--hhcCcccc-Cccc-cCC-CcceEEeecceEEEEEccCchhHHHH--HhHHHHHHhhCCEEEEeCCcccHHHHHHH
Q 038617 82 LDK--WMAPKKRR-LPLL-FFP-ASGEVVSEPFGVVLICSAWNFPINLA--LEPLIGAIAAGNTVMLKPSELAVECASFL 154 (484)
Q Consensus 82 ~~~--~~~~~~~~-~~~~-~~~-~~~~~~~~P~GVv~~i~p~n~P~~~~--~~~i~~ALaaGN~Vvlkps~~~~~t~~~l 154 (484)
+++ |.++.... .+.. ..+ ...+++++|+|||++|+|||||+.++ ++++++||++||+||+|||+.+|.|+..+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 184 (510)
T 1ez0_A 105 VNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIV 184 (510)
T ss_dssp HHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHH
T ss_pred HHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHHHHcCCEEEEECCCCchHHHHHH
Confidence 876 54422110 0000 111 13578999999999999999999985 49999999999999999999999999999
Q ss_pred HHHhc----cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccc--CceeeecCCcCceEEcC
Q 038617 155 AETIP----LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHL--TPVTLELGGKCPAILDT 225 (484)
Q Consensus 155 ~~~l~----~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~--~~~~lelgG~~p~iV~~ 225 (484)
++++. ++ +|+|++|+++| +.+.++.|++|+ ||+|+||||+.+|+.|++.+++++ ||+++|+|||||+||++
T Consensus 185 ~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~l~~~pv~lELGGk~p~iV~~ 264 (510)
T 1ez0_A 185 AECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFP 264 (510)
T ss_dssp HHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEECCCCCEEEECH
T ss_pred HHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhhccCCCccEEEECCCCCeEEEeC
Confidence 99984 45 89999999999 678899999998 999999999999999999999886 99999999999999999
Q ss_pred CCCCCCHH--HHHHHHHHhhcccCCCCccccCCceEEccc-hHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHH
Q 038617 226 LSSPLDIK--VTVKRIIGGKFASCNGQVCVGVDYILVEKK-FAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERL 302 (484)
Q Consensus 226 ~~~daDl~--~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~ 302 (484)
|||++ .|++.+++++|. |+||.|++++|||||++ +||+|+++|++++++++. ||++++.+.+++
T Consensus 265 ---dADl~~~~aa~~i~~~~~~-n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~---------gp~~~~~~~~~~ 331 (510)
T 1ez0_A 265 ---SAMRAKADLADQFVASMTM-GCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP---------STLLTPGIRDSY 331 (510)
T ss_dssp ---HHHHHCTTHHHHHHHHHTG-GGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC---------BCCSSHHHHHHH
T ss_pred ---CCCccHHHHHHHHHHHHHc-CCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC---------CCCCCHHHHHHH
Confidence 99999 999999999999 99999999999999999 999999999999998763 688888888888
Q ss_pred HHHhhchh--cCCceeeCCCcCCCCCeeeeEEEeCCCCC---CcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEE
Q 038617 303 RKLLKDPL--VADAIVHGGLLDKENLFIEPTILLDPPLD---AEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIY 377 (484)
Q Consensus 303 ~~~i~~a~--~~~~~~~gg~~~~~g~~~~Ptil~~~~~~---~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~ 377 (484)
.++++++. +|+++++||. +|+|++|||+.+++++ |++++||+||||++|++|+|+||||+++|+++|||++|
T Consensus 332 ~~~v~~~~~~~Ga~~~~gg~---~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~aN~~~~gLaa~ 408 (510)
T 1ez0_A 332 QSQVVSRGSDDGIDVTFSQA---ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTAT 408 (510)
T ss_dssp HHHHHHHHTSTTEEEEECCC---CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEE
T ss_pred HHHHHHHHhcCCCEEEecCC---CCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCCHHHHHHHHhcCCCCeEEE
Confidence 88888876 2678899986 3899999999988777 99999999999999999999999999999999999999
Q ss_pred EecCCH--HHHHHHhhcc--ceeeEEECCCcccc-CCCCCCccc-CCCCCCCCc--chHHHHHHhhhccEEE
Q 038617 378 AFTKDE--TFKKQIVSGT--SSGSLIFNDTLVQQ-LCDVLPFGG-VGQSGIGRY--HGHYSFETFSHEKAIM 441 (484)
Q Consensus 378 v~t~d~--~~~~~~~~~l--~~g~v~iN~~~~~~-~~~~~pfGG-~~~SG~G~~--~g~~~~~~f~~~k~v~ 441 (484)
|||+|. ++++++++++ ++|+|+||+++.+. ..+.+|||| +|.||.|+. +|.+|+++|++.|++.
T Consensus 409 v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 409 IHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQ 480 (510)
T ss_dssp EECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSSGGGGGGGEEEEEEE
T ss_pred EEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCccHHHHHHhheEEEEc
Confidence 999987 7999999999 79999999876432 246799999 788998754 7999999999887654
No 47
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=6.6e-81 Score=647.91 Aligned_cols=405 Identities=15% Similarity=0.149 Sum_probs=326.7
Q ss_pred HHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCCh----hhhhHHHHHH-HHHHHHHHHHH
Q 038617 7 EIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHP----VETYRDEIGL-IKKSAKYALSC 81 (484)
Q Consensus 7 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~ea~~~ev~~-~~~~~~~~~~~ 81 (484)
.+++|+++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||. .++...|+.. +...++++++.
T Consensus 15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~ 94 (468)
T 1vlu_A 15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 94 (468)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence 588999999999999999999999999999999999999999999999999998 8876569988 88999999999
Q ss_pred HHHhhcCccc--cC-ccc--cCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHH
Q 038617 82 LDKWMAPKKR--RL-PLL--FFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAE 156 (484)
Q Consensus 82 ~~~~~~~~~~--~~-~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~ 156 (484)
++++...... .. +.. ..+...+++++|+|||++|+||| | .++++++++||++||+||+|||+.+|.++..|++
T Consensus 95 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 172 (468)
T 1vlu_A 95 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAK 172 (468)
T ss_dssp HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence 9888643210 00 100 11335678999999999999999 9 9999999999999999999999999999999999
Q ss_pred Hhc----c----c-cCccceeeccCCh-hHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcC
Q 038617 157 TIP----L----Y-LDCKAIKVTNGGV-DVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDT 225 (484)
Q Consensus 157 ~l~----~----a-lp~g~v~~v~g~~-~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~ 225 (484)
++. + + +|+|++|+++ +. ++++.|++|+ ||+|+||||+.+|+.|++.+ +||+++|+|||||+||++
T Consensus 173 l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~~ 248 (468)
T 1vlu_A 173 IVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDE 248 (468)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEECT
T ss_pred HHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEECC
Confidence 995 7 7 9999999999 65 6788999998 99999999999999999876 699999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcC---CCCCCCCccccccCHHHHHHH
Q 038617 226 LSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYG---ENPKDSKSISRIINEYHFERL 302 (484)
Q Consensus 226 ~~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~---g~~~~~~~~gpli~~~~~~~~ 302 (484)
|||++.|++.+++++|. |+| .|++++|||||+++ |+|+++|.++++++++ |||..
T Consensus 249 ---dADl~~Aa~~i~~~~~~-n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~---------------- 306 (468)
T 1vlu_A 249 ---DADLIKAKRISLDAKTN-YPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL---------------- 306 (468)
T ss_dssp ---TCCHHHHHHHHHHTTCC------CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH----------------
T ss_pred ---CCCHHHHHHHHHHHhcC-CCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH----------------
Confidence 99999999999999999 999 99999999999999 9999999999999886 66511
Q ss_pred HHH-hhchhcCCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecC
Q 038617 303 RKL-LKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTK 381 (484)
Q Consensus 303 ~~~-i~~a~~~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~ 381 (484)
.++ ++++. ++++||. | +.||++ ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+
T Consensus 307 ~~~~i~~a~---~~~~gG~----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~ 375 (468)
T 1vlu_A 307 KTAYFDKLN---ELGKLTE----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTE 375 (468)
T ss_dssp HHHHHHHHH---HHTCCCH----H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECS
T ss_pred hcccccccc---eeeccCC----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeC
Confidence 344 55543 4566775 4 689987 7889999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHhhccceeeEEECCCccccCCCCCCcc-----cCCCCCCCCcchHHHHHHhhhccEEEEecCcCCCCCCCCCC
Q 038617 382 DETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFG-----GVGQSGIGRYHGHYSFETFSHEKAIMQRSFFLELEPRYPPW 456 (484)
Q Consensus 382 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfG-----G~~~SG~G~~~g~~~~~~f~~~k~v~~~~~~~~~~~~~~p~ 456 (484)
|.++++++++++++|+|+||++.. ..+.+||| |+|.||+|++ |++|+++|++.|+|..+.. +.+ |||
T Consensus 376 d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~~----~~r-~py 447 (468)
T 1vlu_A 376 NKANAEKFMKGVDSSGVYWNASTR--FADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGDG----QVA-SDY 447 (468)
T ss_dssp CHHHHHHHHHHCCCSEEEESSCGG--GCC-----------------------CCSGGGEEEEEEEECSS----CCS-CCC
T ss_pred CHHHHHHHHHhCCeeEEEEcCCCC--CCCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECCC----CcC-ccc
Confidence 999999999999999999998765 35778999 9999999999 9999999999999988642 455 899
Q ss_pred ch
Q 038617 457 ND 458 (484)
Q Consensus 457 ~~ 458 (484)
++
T Consensus 448 ~~ 449 (468)
T 1vlu_A 448 LG 449 (468)
T ss_dssp --
T ss_pred cc
Confidence 84
No 48
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=1.5e-79 Score=639.11 Aligned_cols=410 Identities=17% Similarity=0.169 Sum_probs=359.7
Q ss_pred CCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHH
Q 038617 3 AAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSCL 82 (484)
Q Consensus 3 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~ 82 (484)
++.+|+++++++|++||+.|+.+++++|.++|++++++|++++++|++++++|+||+..+++..+... .++.+
T Consensus 9 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~-------~~~~~ 81 (464)
T 3k9d_A 9 RSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVF-------ASKHV 81 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHH-------HHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHH-------HHHHH
Confidence 46789999999999999999999999999999999999999999999999999999998876534333 33333
Q ss_pred HHhhcCccc-cCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHH----
Q 038617 83 DKWMAPKKR-RLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAET---- 157 (484)
Q Consensus 83 ~~~~~~~~~-~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~---- 157 (484)
..+++.... .......+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.|+..++++
T Consensus 82 ~~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~ 161 (464)
T 3k9d_A 82 YNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEA 161 (464)
T ss_dssp HHHHTTCCCSEEEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred HHhhhcccccceeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHH
Confidence 333333211 111112345678899999999999999999999999999999999999999999999999986655
Q ss_pred hccc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecC-CcCceEEcCCCCCCCHH
Q 038617 158 IPLY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELG-GKCPAILDTLSSPLDIK 233 (484)
Q Consensus 158 l~~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelg-G~~p~iV~~~~~daDl~ 233 (484)
+.++ +|+|++|+|+| +.+.++.|++|+ ||+|+||||+.+ .+++++++||+ +|+| ||+|+||++ |||++
T Consensus 162 ~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~~~kpv-lelG~G~~p~iV~~---dADl~ 233 (464)
T 3k9d_A 162 AEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYSSGTPA-IGVGPGNGPAFIER---SANIP 233 (464)
T ss_dssp HHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTTSSSCE-EEBCCCCCEEEECT---TSCHH
T ss_pred HHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHhcCCcE-EeeCCCCCeEEECC---CCCHH
Confidence 5677 99999999999 678999999998 999999999984 55677889999 7888 999999999 99999
Q ss_pred HHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHH-------HhhcCCCC--CCCCccccccCHHHHHHHHH
Q 038617 234 VTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTI-------KKFYGENP--KDSKSISRIINEYHFERLRK 304 (484)
Q Consensus 234 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~-------~~~~~g~~--~~~~~~gpli~~~~~~~~~~ 304 (484)
.|++.+++++|+ |+||.|+++++||||+++||+|+++|+++. +.+++|+| ++++++||+++.++++++.+
T Consensus 234 ~Aa~~i~~~~~~-n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~ 312 (464)
T 3k9d_A 234 RAVKHILDSKTF-DNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIAN 312 (464)
T ss_dssp HHHHHHHHHHTG-GGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHH
T ss_pred HHHHHHHHHHhc-CCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHH
Confidence 999999999999 999999999999999999999999999885 44566666 56889999999999999999
Q ss_pred Hhhchhc-CCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHH----HHHhcCCCCceEEEe
Q 038617 305 LLKDPLV-ADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESI----EFINSRPKPLAIYAF 379 (484)
Q Consensus 305 ~i~~a~~-~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai----~~~n~~~~gl~a~v~ 379 (484)
+++.+.. ++++++||.. ++++++++. +|+||||++|++|+|+|||| +++|+++|||+++||
T Consensus 313 ~~~~a~~~ga~vl~gg~~-------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~ 378 (464)
T 3k9d_A 313 LAGLTVPADARVLIAEET-------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIH 378 (464)
T ss_dssp HTTCCCCTTCCEEEEECC-------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEE
T ss_pred HhhhhhcCCCEEEEcCCC-------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEE
Confidence 9998764 6789988753 567788865 89999999999999999997 799999999999999
Q ss_pred cCCHHHHHHHhhccceeeEEECCCccc-------cCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 380 TKDETFKKQIVSGTSSGSLIFNDTLVQ-------QLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 380 t~d~~~~~~~~~~l~~g~v~iN~~~~~-------~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
|+|.+.++++++++++|+|+||+++.+ ...+.+|||| +.+|.|.++|..|+++|++.|+|...
T Consensus 379 t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~ 448 (464)
T 3k9d_A 379 SEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATG 448 (464)
T ss_dssp CSCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEEC
T ss_pred eCCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEec
Confidence 999999999999999999999998753 2468999998 88999999999999999999998765
No 49
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=7.3e-80 Score=639.26 Aligned_cols=402 Identities=19% Similarity=0.197 Sum_probs=333.4
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHc-------CCChh----hhhHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDL-------GKHPV----ETYRDEIGL 70 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~-------Gk~~~----ea~~~ev~~ 70 (484)
.++.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+ |||.. ++. .|+..
T Consensus 25 ~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~~~~rl~~a~-~ev~~ 103 (463)
T 2h5g_A 25 KPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAPLLKRLSLST-SKLNS 103 (463)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHHHHHTTCCCH-HHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCchhhhhhhhH-HHHHH
Confidence 4678899999999999999999999999999999999999999999999999999 69987 455 59999
Q ss_pred HHHHHHHHHHHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHH
Q 038617 71 IKKSAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVEC 150 (484)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t 150 (484)
+++.+++++..++++.+... .......+...++.++|+|||++|+||| |.+.+ +++++||++||+||+|||+.+|.+
T Consensus 104 ~~~~~~~~a~~~~~~~g~~~-~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN~VVlKps~~tp~t 180 (463)
T 2h5g_A 104 LAIGLRQIAASSQDSVGRVL-RRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGNGLLLKGGKEAAHS 180 (463)
T ss_dssp HHHHHHHHHHHCTTSTTCEE-EEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTCEEEEECCGGGHHH
T ss_pred HHHHHHHHHHhhHhhcCccc-ccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCCEEEEECCCCcHHH
Confidence 99999999988777655331 1110012335678999999999999776 76666 799999999999999999999999
Q ss_pred HHHHHHHhcccc----CccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcC
Q 038617 151 ASFLAETIPLYL----DCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDT 225 (484)
Q Consensus 151 ~~~l~~~l~~al----p~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~ 225 (484)
+..|++++.+++ |+|++|+++|+.++++.|++|+ ||+|+||||+.+|+.|++.++ +||+++|+|||||+||++
T Consensus 181 ~~~l~~l~~~al~~~GP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~pv~lElGGk~p~iV~~ 258 (463)
T 2h5g_A 181 NRILHLLTQEALSIHGVKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GIPVMGHSEGICHMYVDS 258 (463)
T ss_dssp HHHHHHHHHHHHHTTTCGGGEEECCTTCCC-------CCCSEEEEESCHHHHHHHHHHCS--SSCBCSCSCCCEEEEECT
T ss_pred HHHHHHHHHHHHHhcCCCCeEEEEcCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CCCEEEecCCcceEEEcC
Confidence 999999999985 6999999999667899999998 999999999999999999887 899999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHH
Q 038617 226 LSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKL 305 (484)
Q Consensus 226 ~~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~ 305 (484)
|||++.|++.+++++|. | ||.|++++|||||+++|| ||+ +++ +
T Consensus 259 ---dADl~~Aa~~i~~~~f~-n-GQ~C~a~~rvlV~~~i~d------------------------~p~-----~~~---~ 301 (463)
T 2h5g_A 259 ---EASVDKVTRLVRDSKCE-Y-PAACNALETLLIHRDLLR------------------------TPL-----FDQ---I 301 (463)
T ss_dssp ---TCCTTTHHHHHHHHHHS-C-TTSTTSEEEEEEEGGGTT------------------------SHH-----HHH---H
T ss_pred ---CCCHHHHHHHHHHHhcc-C-CCccccCcEEEEeccccc------------------------hHH-----HHH---H
Confidence 99999999999999999 9 999999999999999998 232 222 3
Q ss_pred hhchh-cCCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHH
Q 038617 306 LKDPL-VADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDET 384 (484)
Q Consensus 306 i~~a~-~~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~ 384 (484)
++++. +|++++.|+.....++|+ +++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 302 i~~~~~~Ga~v~~G~~~~~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~ 373 (463)
T 2h5g_A 302 IDMLRVEQVKIHAGPKFASYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDEN 373 (463)
T ss_dssp HHHHHHTTCEEEECHHHHC-----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHH
T ss_pred HHHHHhCCCEEEeCCcccccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCceEEEEeCCHH
Confidence 44443 366777444322234442 578999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccceeeEEECCCccccCCCCCCcccCCCCCCC--Cc--chHHHHHHhhhccEEEEecCcCCCCCCCCCCchHH
Q 038617 385 FKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIG--RY--HGHYSFETFSHEKAIMQRSFFLELEPRYPPWNDFK 460 (484)
Q Consensus 385 ~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G--~~--~g~~~~~~f~~~k~v~~~~~~~~~~~~~~p~~~~~ 460 (484)
+++++++++++|+|+||++.. ..+.+||||+|.||+| ++ +|.+|+++|++.|+|+.+.. +.+ |||++.|
T Consensus 374 ~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~~----~~r-~~y~~~~ 446 (463)
T 2h5g_A 374 TAEFFLQHVDSACVFWNASTR--FSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGKD----HVV-SDFSEHG 446 (463)
T ss_dssp HHHHHHHHCCSSEEEESSCGG--GCSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECSS----CCG-GGGSTTS
T ss_pred HHHHHHHhCCeeEEEEeCCcc--CCCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECCC----ccc-CCccccc
Confidence 999999999999999998765 3678999999999999 66 89999999999999988753 455 7887654
Q ss_pred H
Q 038617 461 M 461 (484)
Q Consensus 461 ~ 461 (484)
.
T Consensus 447 ~ 447 (463)
T 2h5g_A 447 S 447 (463)
T ss_dssp S
T ss_pred h
Confidence 3
No 50
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=1.5e-76 Score=612.73 Aligned_cols=390 Identities=18% Similarity=0.198 Sum_probs=322.7
Q ss_pred HHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCCh----hhhhHH-------HHHHHHH
Q 038617 5 MGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHP----VETYRD-------EIGLIKK 73 (484)
Q Consensus 5 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~ea~~~-------ev~~~~~ 73 (484)
.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+||+. .++..+ |+..+++
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~ 104 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE 104 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999984 355432 5666666
Q ss_pred HHHHHHHHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHH
Q 038617 74 SAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASF 153 (484)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~ 153 (484)
.+++++...+. . ...........+...+++++|+|||++|+||| | .++++++++||++||+||+|||+.+|.|+..
T Consensus 105 ~l~~~a~~~~~-~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 180 (444)
T 4ghk_A 105 GLRQVATLPDP-I-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTA 180 (444)
T ss_dssp HHHHHHHSCCC-T-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHhhccc-c-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHH
Confidence 66665543321 0 11111000112446788999999999999998 8 6889999999999999999999999999999
Q ss_pred HHHHh----ccc-cCccceeeccC-Chh-HHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcC
Q 038617 154 LAETI----PLY-LDCKAIKVTNG-GVD-VCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDT 225 (484)
Q Consensus 154 l~~~l----~~a-lp~g~v~~v~g-~~~-~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~ 225 (484)
|++++ .++ +|+|++|+++| +.+ .++.|..|+ ||.|+||||+.+|+.+++.+ +||+++|||||||+||++
T Consensus 181 l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~~ 257 (444)
T 4ghk_A 181 LAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVDD 257 (444)
T ss_dssp HHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEECT
T ss_pred HHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEECC
Confidence 99997 566 99999999998 554 667777787 99999999999999998866 699999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcC---CCCCCCCccccccCHHHHHHH
Q 038617 226 LSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYG---ENPKDSKSISRIINEYHFERL 302 (484)
Q Consensus 226 ~~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~---g~~~~~~~~gpli~~~~~~~~ 302 (484)
|||++.|++.+++++|. |+| .|++++|||||+++||+|+++|+++++++++ |+| ..
T Consensus 258 ---dADl~~Aa~~i~~~~~~-n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p----------------~~ 316 (444)
T 4ghk_A 258 ---RASVTKALTVCDNAKTH-RYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDA----------------DA 316 (444)
T ss_dssp ---TCCHHHHHHHCC-----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECH----------------HH
T ss_pred ---CCCHHHHHHHHHHHhcC-CCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCH----------------HH
Confidence 99999999999999999 999 9999999999999999999999999999876 554 12
Q ss_pred HHHhhchhcCCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCC
Q 038617 303 RKLLKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKD 382 (484)
Q Consensus 303 ~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d 382 (484)
.++++++. . | ++ ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 317 ~~~i~~a~-------~------G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d 375 (444)
T 4ghk_A 317 RAVLEAAG-------V------G------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTED 375 (444)
T ss_dssp HHHHHHTT-------C------C------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSB
T ss_pred HHHHHhcc-------c------C------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCC
Confidence 45565442 1 1 11 35678999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccceeeEEECCCccccCCCCCCcccCCCCCCC----CcchHHHHHHhhhccEEEEecC
Q 038617 383 ETFKKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIG----RYHGHYSFETFSHEKAIMQRSF 445 (484)
Q Consensus 383 ~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G----~~~g~~~~~~f~~~k~v~~~~~ 445 (484)
.++++++++++++|+|+||+++.. .+.+||||.+.||+| +++|++|+++||+.|+|++..+
T Consensus 376 ~~~a~~~a~~l~aG~V~vN~~~~~--~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~~ 440 (444)
T 4ghk_A 376 HDRAMRFLREVDSASVMVNASTRF--ADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGHG 440 (444)
T ss_dssp HHHHHHHHHHCCSSEEEEEECGGG--CSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEEE
T ss_pred HHHHHHHHHhCCcceEEEcCCCcc--CCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECCC
Confidence 999999999999999999998753 578999999999998 6789999999999999988754
No 51
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=9.5e-77 Score=611.37 Aligned_cols=388 Identities=20% Similarity=0.255 Sum_probs=332.4
Q ss_pred HHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCCh----hhhhH-------HHHHHHHH
Q 038617 5 MGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHP----VETYR-------DEIGLIKK 73 (484)
Q Consensus 5 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~ea~~-------~ev~~~~~ 73 (484)
.+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++++|+||+. .++.. .|+..+++
T Consensus 13 ~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~~ 92 (427)
T 1o20_A 13 MDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIK 92 (427)
T ss_dssp -CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999885 55542 37777777
Q ss_pred HHHHHHHHHHHhhcCccccCccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHH
Q 038617 74 SAKYALSCLDKWMAPKKRRLPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASF 153 (484)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~ 153 (484)
.+++++...+. .+ ..........+...+++++|+|||++|+||| | .++++++++||++||+||+|||+.+|.++..
T Consensus 93 ~l~~~a~~~~~-~g-~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p-~-~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~ 168 (427)
T 1o20_A 93 ACETVIGLKDP-VG-EVIDSWVREDGLRIARVRVPIGPIGIIYESR-P-NVTVETTILALKSGNTILLRGGSDALNSNKA 168 (427)
T ss_dssp HHHHHHHSCCC-TT-CEEEEEECTTSCEEEEEEEECCCEEEECCSC-T-HHHHHHHHHHHHTTCCEEEECCGGGHHHHHH
T ss_pred HHHHHHhcccc-cC-ccccccccCCCceeEEEeecceeEEEEecCC-h-HHHHHHHHHHHHcCCEEEEECCHhHHHHHHH
Confidence 77777654322 11 1100000012334678999999999999986 4 7899999999999999999999999999999
Q ss_pred HHHHhc----cc-cCccceeeccC-Chh-HHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcC
Q 038617 154 LAETIP----LY-LDCKAIKVTNG-GVD-VCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDT 225 (484)
Q Consensus 154 l~~~l~----~a-lp~g~v~~v~g-~~~-~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~ 225 (484)
|++++. ++ +|+|++|+++| +.+ .++.|..|+ ||+|+||||+.+|+.|++.+ +||+++|||||||+||++
T Consensus 169 l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV~~ 245 (427)
T 1o20_A 169 IVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFVDE 245 (427)
T ss_dssp HHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEECT
T ss_pred HHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEEeC
Confidence 999997 55 89999999998 554 567777786 99999999999999999877 599999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHH
Q 038617 226 LSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKL 305 (484)
Q Consensus 226 ~~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~ 305 (484)
|||++.|++.+++++|. |+| .|++++|||||+++||+|+++|++++++++++
T Consensus 246 ---dADl~~Aa~~i~~~~f~-n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~----------------------- 297 (427)
T 1o20_A 246 ---SADLKKAVPVIINAKTQ-RPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE----------------------- 297 (427)
T ss_dssp ---TSCHHHHHHHHHHHHHS-CTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE-----------------------
T ss_pred ---CCCHHHHHHHHHHHhcc-CCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe-----------------------
Confidence 99999999999999999 998 99999999999999999999999999877531
Q ss_pred hhchhcCCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 038617 306 LKDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETF 385 (484)
Q Consensus 306 i~~a~~~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 385 (484)
+.||... .+ |+ ||| ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++
T Consensus 298 ----------~~gg~~~-~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~ 361 (427)
T 1o20_A 298 ----------VRGCEKT-RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSN 361 (427)
T ss_dssp ----------EEECHHH-HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHH
T ss_pred ----------eecChhh-hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHH
Confidence 1122211 12 33 885 34578999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccceeeEEECCCccccCCCCCCcccCCCCCCC----CcchHHHHHHhhhccEEEEecC
Q 038617 386 KKQIVSGTSSGSLIFNDTLVQQLCDVLPFGGVGQSGIG----RYHGHYSFETFSHEKAIMQRSF 445 (484)
Q Consensus 386 ~~~~~~~l~~g~v~iN~~~~~~~~~~~pfGG~~~SG~G----~~~g~~~~~~f~~~k~v~~~~~ 445 (484)
++++++++++|+|+||++.. ..+.+||||.|.||+| +++|++|+++|++.|+|+.+..
T Consensus 362 a~~~~~~l~~G~V~iN~~~~--~~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~~ 423 (427)
T 1o20_A 362 AKKFVSEIDAAAVYVNASTR--FTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGEY 423 (427)
T ss_dssp HHHHHHHCCSSEEEESSCGG--GCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECSS
T ss_pred HHHHHHhCCccEEEECCCCc--cCCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECCC
Confidence 99999999999999998765 3678999999999997 4679999999999999988753
No 52
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=5e-76 Score=610.66 Aligned_cols=410 Identities=15% Similarity=0.148 Sum_probs=334.4
Q ss_pred CCCHHHHHHHHHHHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHH
Q 038617 2 AAAMGEIEDKLAELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGKHPVETYRDEIGLIKKSAKYALSC 81 (484)
Q Consensus 2 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 81 (484)
.++.+|+++++++|++||+.|+.+++++|.++|++++++|++++++|++++++|+|||..+++..|+..+.+.+
T Consensus 3 ~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~------ 76 (452)
T 3my7_A 3 VTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFI------ 76 (452)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHH------
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH------
Confidence 57899999999999999999999999999999999999999999999999999999999998754554443333
Q ss_pred HHHhhcCcccc-CccccCCCcceEEeecceEEEEEccCchhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhc-
Q 038617 82 LDKWMAPKKRR-LPLLFFPASGEVVSEPFGVVLICSAWNFPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIP- 159 (484)
Q Consensus 82 ~~~~~~~~~~~-~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~- 159 (484)
.+++...... ......+...+..++|+|||++|+|||||++++++++++||++||+||+|||+.+|.|+..+++++.
T Consensus 77 -~~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~ 155 (452)
T 3my7_A 77 -YNKYKDEQTCGILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLD 155 (452)
T ss_dssp -HHHHTTCCCSEEC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred -HHHhhhccccccccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHH
Confidence 2233222111 1111223456889999999999999999999999999999999999999999999999999988876
Q ss_pred ---cc-cCccceeeccC-ChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHH
Q 038617 160 ---LY-LDCKAIKVTNG-GVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIK 233 (484)
Q Consensus 160 ---~a-lp~g~v~~v~g-~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~ 233 (484)
++ +|+|++|+++| +.+.++.|++|+ ||+|+||||+.+++ ++++++||+++|+|||||+||++ |||++
T Consensus 156 a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~~~~kp~~~e~gG~~p~iV~~---dADl~ 228 (452)
T 3my7_A 156 AAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAYSSGKPAIGVGAGNVPVVIDE---TADIK 228 (452)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHH----HHHTSSSCEEECC--CEEEEECT---TSCHH
T ss_pred HHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHH----HHHhcCCCEEecCCCCCeEEEeC---CCCHH
Confidence 56 99999999999 778999999997 99999999998654 56778999999999999999999 99999
Q ss_pred HHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhc-C
Q 038617 234 VTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLV-A 312 (484)
Q Consensus 234 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~-~ 312 (484)
.|++.+++++|+ |+||.|+++++||||+++||+|+++|+++ +||++++.+.+++.++++++.. +
T Consensus 229 ~Aa~~iv~s~~~-~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~--------------~gpli~~~~~~~v~~~i~~~~~~~ 293 (452)
T 3my7_A 229 RAVASVLMSKTF-DNGVVCASEQAVIVVDEVYDEVKERFASH--------------KAHVLSKTDADKVRKVLLIDGALN 293 (452)
T ss_dssp HHHHHHHHGGGG-GGGCCTTCEEEEEEEGGGHHHHHHHHHTT--------------TEEECCHHHHHHHHHHHEETTEEC
T ss_pred HHHHHHHHHHhC-CCCCccCCCcEEEEcHHHHHHHHHHHHHh--------------CCCcCCHHHHHHHHHHHHhhcccC
Confidence 999999999999 99999999999999999999999999764 3899999999999999987643 4
Q ss_pred CceeeCCCcC----CCCCeeeeEE-------EeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCC----CCceEE
Q 038617 313 DAIVHGGLLD----KENLFIEPTI-------LLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRP----KPLAIY 377 (484)
Q Consensus 313 ~~~~~gg~~~----~~g~~~~Pti-------l~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~----~gl~a~ 377 (484)
+++ +||... ..|+|++||+ +.++++++++++ |+||||++|++|+|+||||+++|++. |||+++
T Consensus 294 a~v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~ 371 (452)
T 3my7_A 294 AKI-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSG 371 (452)
T ss_dssp GGG-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEE
T ss_pred CeE-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEE
Confidence 454 576532 3589999997 678999999875 89999999999999999999999974 999999
Q ss_pred EecCCHHHHHH---HhhccceeeEEECCCccccC---------CCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 038617 378 AFTKDETFKKQ---IVSGTSSGSLIFNDTLVQQL---------CDVLPFGGVGQSGIGRYHGHYSFETFSHEKAIMQR 443 (484)
Q Consensus 378 v~t~d~~~~~~---~~~~l~~g~v~iN~~~~~~~---------~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~v~~~ 443 (484)
|||+|.+.+++ +++++++|+|+||+++.+.. .+.+++ |.+..|.+...+..+.+++.+.|+|..+
T Consensus 372 i~t~d~~~a~~i~~~a~~l~~G~V~VN~~~~~Gg~G~~~~f~~~~~~t~-g~g~~Gg~~~~~nv~~~~l~n~~~v~~~ 448 (452)
T 3my7_A 372 LYTNQDVNADRIRYFGDKMKTARILINIPTTHGGIGDLYNFNVAPSLTL-GCGSWGGNSISENVGPKHLINKKTVAKR 448 (452)
T ss_dssp EESCTTTCHHHHHHHHHHCCCSEEEESCCCC-----------------------------CCCCCGGGGEEEEEEECC
T ss_pred EEcCCHHHHHHHHHHHHhCCEEEEEECCCCCCcccccccccCcCceEee-eccccCCCccCCCCChhHeeeeeEEEee
Confidence 99999877777 99999999999999754211 111111 2233344444555677788877777654
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=97.13 E-value=0.25 Score=49.02 Aligned_cols=337 Identities=15% Similarity=0.154 Sum_probs=175.0
Q ss_pred HhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCC-C------hhhhhHHHHHH--------HHHHHHHHHHHH
Q 038617 18 TFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLGK-H------PVETYRDEIGL--------IKKSAKYALSCL 82 (484)
Q Consensus 18 A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk-~------~~ea~~~ev~~--------~~~~~~~~~~~~ 82 (484)
.+..++..+..+-.+..+.+.+-++++.|+-....++..-+ . +.-. ..|+.. ..+.++.+.+++
T Consensus 23 ~ll~r~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~~l~vs-~~ei~~A~~~l~~~~~~ai~~A~~~I 101 (423)
T 4gic_A 23 RLLAWSESEDTDIHQRVTEIIGCIRRDGDAALVELTARFDHFVVDTAAALELP-RDVLEAAWQALPAEQAKALREAAERI 101 (423)
T ss_dssp HHHCCC---CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCCSSGGGGEEC-HHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred HHhcccccChHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCCCccceecC-HHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence 33445656666666667777777777766555545544321 1 1111 123332 223455566666
Q ss_pred HHhhcCccccCc--cccCCCcceEEeecceEEEEEccCc---hhHHHHHhHHHHHHhhCCE-EE-EeCCcccHHHHHHHH
Q 038617 83 DKWMAPKKRRLP--LLFFPASGEVVSEPFGVVLICSAWN---FPINLALEPLIGAIAAGNT-VM-LKPSELAVECASFLA 155 (484)
Q Consensus 83 ~~~~~~~~~~~~--~~~~~~~~~~~~~P~GVv~~i~p~n---~P~~~~~~~i~~ALaaGN~-Vv-lkps~~~~~t~~~l~ 155 (484)
+.+...+..... ....+.....++.|+--|++..|.- ||-. ++..++||-.+|+. +| .-|.+........|+
T Consensus 102 ~~fh~~Q~~~~~~~~~~~G~~~g~~~~Pi~~VGlYVPGG~A~ypSs-vLM~aiPAkVAGV~~Iv~~tPp~~G~i~p~iL~ 180 (423)
T 4gic_A 102 RAYAERQKLDSWDYREADGTLLGQKITPLDRVGLYVPGGKAAYPSS-VLMNAVPAKVAGVPELIMAVPAPRGELNALVLA 180 (423)
T ss_dssp HHHHHHHCCCCEEEECTTSCEEEEEEEECSEEEEECCCSTTCCHHH-HHHHHHHHHHHTCSEEEEECCCGGGCCCHHHHH
T ss_pred HHHHHhcccCCcccccCCCCEEEEEEEEecceeEEeeCCCCchhhH-HHHhhccHHHhCCCeEEEecCCCCCCccHHHHH
Confidence 666544332211 1223455677889999999999944 6644 44467899999986 33 345443211112222
Q ss_pred HHhccccCccceeecc-CChhHHHHHH---hC--CCCeEEEeCChHHHHHHHHHHhcccCceeeec-CCcC--ceEEcCC
Q 038617 156 ETIPLYLDCKAIKVTN-GGVDVCEQLL---QQ--KWNKIFFTGSPRVGSIVMSAAAKHLTPVTLEL-GGKC--PAILDTL 226 (484)
Q Consensus 156 ~~l~~alp~g~v~~v~-g~~~~~~~L~---~~--~vd~v~ftGs~~~g~~i~~~a~~~~~~~~lel-gG~~--p~iV~~~ 226 (484)
.+ +.+ |+=.+.. |+.....+|. +. +||.|+=.|..-+..+=..... .+-..+ .|.+ -+|-|+
T Consensus 181 AA-~l~---Gv~eIy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~g----~VgIDm~AGPSEilViAD~- 251 (423)
T 4gic_A 181 AA-YIS---GVDRVFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVFG----QVGIDMVAGPSEILVISDG- 251 (423)
T ss_dssp HH-HHH---TCCEEECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHBT----TBEECCCCCCCEEEEEECS-
T ss_pred HH-Hhc---CCcEEEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhcC----CcCcccccccceEEEEeCC-
Confidence 11 111 2112222 3434434443 11 4999999998766543222211 122222 2333 344455
Q ss_pred CCCCCHHHHHHHHHHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHh
Q 038617 227 SSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLL 306 (484)
Q Consensus 227 ~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i 306 (484)
++|.+..+..++.-+=. ... .+.++|..+ ++|.+++.+++.+..-.-| ..+..++-+
T Consensus 252 --~a~p~~vAaDLlsQAEH-d~~-----a~~iLvT~s--~~la~~V~~~i~~~l~~l~-------------r~~i~~~sl 308 (423)
T 4gic_A 252 --RTDPDWIAMDLFSQAEH-DED-----AQAILISPD--AAHLEAVQASIERLLPGME-------------RAEVIRTSL 308 (423)
T ss_dssp --CSCHHHHHHHHHHHHTT-CTT-----CEEEEEESC--HHHHHHHHHHHHHHGGGCT-------------THHHHHHHH
T ss_pred --CCCHHHHHHHHHHhhcc-CCC-----CeEEEEeCc--HHHHHHHHHHHHHHHhhCc-------------cHHHHHHHH
Confidence 79999999999888754 322 234566555 4555555555543210000 001111111
Q ss_pred hchhcCCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHH
Q 038617 307 KDPLVADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFK 386 (484)
Q Consensus 307 ~~a~~~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~ 386 (484)
+ -+| .++.++|++|+++++|..-- =-.-|.++|...
T Consensus 309 ~---------------------------------------~~g---~ii~v~~~~ea~~~~N~~AP-EHLel~~~~~~~- 344 (423)
T 4gic_A 309 E---------------------------------------RRG---GMILVDDLEQAAAVANRIAP-EHLELSVESPEV- 344 (423)
T ss_dssp H---------------------------------------HHC---EEEECSSHHHHHHHHHHHCC-SEEEEESSCHHH-
T ss_pred h---------------------------------------cCc---eEEEEeehHHHHHHHHhhCh-HHhhhhhCCHHH-
Confidence 1 111 34457999999999999422 246678888764
Q ss_pred HHHhhccc-eeeEEECCCcccc-------CCCCCCcccCCCCCCCCcchHHHHHHhhhccE
Q 038617 387 KQIVSGTS-SGSLIFNDTLVQQ-------LCDVLPFGGVGQSGIGRYHGHYSFETFSHEKA 439 (484)
Q Consensus 387 ~~~~~~l~-~g~v~iN~~~~~~-------~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~ 439 (484)
+..+++ +|.|++...+.-. .+..+|- +|..++.+..+...|...-+
T Consensus 345 --~l~~i~nAGaIFlG~~tp~~~GDY~aG~NHvLPT-----~G~Ar~~sgLsv~~F~K~~s 398 (423)
T 4gic_A 345 --LVESIRNAGAIFMGRYTAEALGDYCAGPNHVLPT-----SGTARFSSPLGVYDFQKRSS 398 (423)
T ss_dssp --HGGGCCCCSEEEEC----------------CCCC-----TTGGGTCCCCCGGGGEEEEE
T ss_pred --HHhhCcEeceeecCCCCchhhhhcCcCCCccCCC-----CCcccccCCCCHHHeeeeee
Confidence 556665 8999998754211 1223343 34566667777889984433
No 54
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=96.57 E-value=0.65 Score=46.17 Aligned_cols=326 Identities=15% Similarity=0.180 Sum_probs=173.9
Q ss_pred HHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCC----hhhhhHHHHH--------HHHHHHHHHHHHHHHhhcCccccC-c
Q 038617 28 AWRKNQLRALIELLQDNEDKIFKALHQDLGKH----PVETYRDEIG--------LIKKSAKYALSCLDKWMAPKKRRL-P 94 (484)
Q Consensus 28 ~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~----~~ea~~~ev~--------~~~~~~~~~~~~~~~~~~~~~~~~-~ 94 (484)
.+-....+.+.+-++++.|+-....++...+- +.-+ ..|+. ...+.++.+.++++.+...+.... .
T Consensus 30 ~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs-~~ei~~A~~~~~~~~~~ai~~A~~nI~~fH~~Q~~~~~~ 108 (434)
T 1kae_A 30 ESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVS-AEEIAAASERLSDELKQAMAVAVKNIETFHTAQKLPPVD 108 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSSCCCCSBCC-HHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCccccccC-HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 34445566666666666665555454443321 1111 12333 234455666777777765553321 1
Q ss_pred c-ccCCCcceEEeecceEEEEEccC---chhHHHHHhHHHHHHhhCCEEEEe--CCcccHHHHHHHHHHhccccCcccee
Q 038617 95 L-LFFPASGEVVSEPFGVVLICSAW---NFPINLALEPLIGAIAAGNTVMLK--PSELAVECASFLAETIPLYLDCKAIK 168 (484)
Q Consensus 95 ~-~~~~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~i~~ALaaGN~Vvlk--ps~~~~~t~~~l~~~l~~alp~g~v~ 168 (484)
. ...|.....++.|+--|++..|. -||- +.+...+||-.+|+.=|+- |..-.|.+ ..-+.++ |+=.
T Consensus 109 ~~~~~Gv~~gq~~~Pi~rvGlYVPGG~a~ypS-svLM~aiPAkVAGV~~Iv~~tPp~i~p~i-L~AA~l~------Gv~e 180 (434)
T 1kae_A 109 VETQPGVRCQQVTRPVASVGLYIPGGSAPLFS-TVLMLATPASIAGCKKVVLCSPPPIADEI-LYAAQLC------GVQD 180 (434)
T ss_dssp EEEETTEEEEEEEEECSEEEEECCCSSSCCTH-HHHHHHHHHHHHTCSEEEEEECSSCCHHH-HHHHHHT------TCCE
T ss_pred EEecCCcEEEEEEeehheEEEEecCCCCCchh-HHHHhhccHhhcCCCeEEEECCCCCCHHH-HHHHHHc------CCCE
Confidence 1 12244556788999999999996 4664 4455678999999875543 43223322 1111111 1112
Q ss_pred ecc-CChhHHHHHH---hC-C-CCeEEEeCChHHHHHHHHHHhcccCceeeec-CCcC--ceEEcCCCCCCCHHHHHHHH
Q 038617 169 VTN-GGVDVCEQLL---QQ-K-WNKIFFTGSPRVGSIVMSAAAKHLTPVTLEL-GGKC--PAILDTLSSPLDIKVTVKRI 239 (484)
Q Consensus 169 ~v~-g~~~~~~~L~---~~-~-vd~v~ftGs~~~g~~i~~~a~~~~~~~~lel-gG~~--p~iV~~~~~daDl~~aa~~i 239 (484)
+.. |+.....+|. +. + ||+|+=.|..-+..+=....... ..+-..+ .|.+ -+|-|+ +||.+..+.++
T Consensus 181 Iy~vGGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~~~-G~VgIDm~AGPSEilViAD~---tAnp~~vAaDL 256 (434)
T 1kae_A 181 VFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRL-DGAAIDMPAGPSEVLVIADS---GATPDFVASDL 256 (434)
T ss_dssp EEECCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHHCT-TSCEESCCCCCCEEEEEECT---TSCHHHHHHHH
T ss_pred EeecccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHhhc-CccccCCCCCCceEEEEeCC---CCCHHHHHHHH
Confidence 222 3434334443 12 3 99999888776543211110001 1122222 2333 344466 89999999999
Q ss_pred HHhhcccCCCCccccCCceEEccchHHHHHHHHHHHHHhhcCCCCCCCCccccccCHHHHHHHHHHhhchhcCCceeeCC
Q 038617 240 IGGKFASCNGQVCVGVDYILVEKKFAATLIESLKTTIKKFYGENPKDSKSISRIINEYHFERLRKLLKDPLVADAIVHGG 319 (484)
Q Consensus 240 ~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~~~~~~gg 319 (484)
+.-+=. .. . .+.++|..+ ++|.+++.+++.+....-| .. +.+
T Consensus 257 LsQAEH-d~----~-a~aiLvT~s--~~la~~V~~ev~~ql~~lp-------------r~----~ia------------- 298 (434)
T 1kae_A 257 LSQAEH-GP----D-SQVILLTPA--ADMARRVAEAVERQLAELP-------------RA----ETA------------- 298 (434)
T ss_dssp HHHHTT-CT----T-CEEEEEESC--HHHHHHHHHHHHHHHTTCT-------------TH----HHH-------------
T ss_pred HHHhcc-CC----C-CcEEEEECC--HHHHHHHHHHHHHHHHhCC-------------hH----HHH-------------
Confidence 888754 22 2 234555554 4455555444443210000 00 111
Q ss_pred CcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHhhccc-eeeE
Q 038617 320 LLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSRPKPLAIYAFTKDETFKKQIVSGTS-SGSL 398 (484)
Q Consensus 320 ~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~-~g~v 398 (484)
++-+..- .|+.++|++||++++|..-- =-.-|.++|+.. +..+++ +|.|
T Consensus 299 -------------------------~~sl~~~-~ii~v~~l~ea~~~~N~~AP-EHLel~~~dp~~---~l~~I~nAGaI 348 (434)
T 1kae_A 299 -------------------------RQALNAS-RLIVTKDLAQCVEISNQYGP-EHLIIQTRNARE---LVDSITSAGSV 348 (434)
T ss_dssp -------------------------HHHHTTC-EEEECSSHHHHHHHHHHHCC-SEEEEESTTHHH---HGGGCCSCSEE
T ss_pred -------------------------HHHHHcC-eEEEECCHHHHHHHHHHhhh-HhhhhhhcCHHH---HHhhcCcccch
Confidence 1111222 45678999999999999532 256788988853 555555 8999
Q ss_pred EECCCccc-------cCCCCCCcccCCCCCCCCcchHHHHHHhhhccE
Q 038617 399 IFNDTLVQ-------QLCDVLPFGGVGQSGIGRYHGHYSFETFSHEKA 439 (484)
Q Consensus 399 ~iN~~~~~-------~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~ 439 (484)
++...+.- ..+..+|-+| ..|+.+..+...|..+-+
T Consensus 349 FlG~~tpe~~GDY~aG~NHvLPT~G-----~AR~~sgLsV~~F~K~~s 391 (434)
T 1kae_A 349 FLGDWSPESAGDYASGTNHVLPTYG-----YTATCSSLGLADFQKRMT 391 (434)
T ss_dssp EESTTCCHHHHHHTSSSCCCCCCTT-----GGGTCCCSCGGGGEEEEE
T ss_pred hcCCCCchhhcccccCCCcccCCCC-----ceeccCCCcHHhccceee
Confidence 99975421 1244555555 456666677889985443
No 55
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=57.88 E-value=14 Score=33.37 Aligned_cols=69 Identities=13% Similarity=0.111 Sum_probs=45.5
Q ss_pred HhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccccCccceeeccCChhHHHHHHhCCCCeEEEeCChHHHHH
Q 038617 126 LEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSI 199 (484)
Q Consensus 126 ~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~alp~g~v~~v~g~~~~~~~L~~~~vd~v~ftGs~~~g~~ 199 (484)
+..++..+.+||-||++.+. +.....+..++...+|.+++.+++.+.+- .....-+.+.++.+...-..
T Consensus 21 F~~l~~~vl~GnQiIVrg~~--~~~~~s~~~~L~~lLP~~c~~l~~~s~~Y---~~~~~cnilgls~~v~iP~~ 89 (226)
T 3v42_A 21 FRMLAWHVLMGNQVIWKSRD--VDLVQSAFEVLRTMLPVGCVRIIPYSSQY---EEAYRCNFLGLSPHVQIPPH 89 (226)
T ss_dssp HHHHHHHHHHTCEEEEECSC--HHHHHHHHHHHGGGSCGGGCCEEEEESSC---CCTTTCSEEEECTTCCCCHH
T ss_pred HHHHHHHHhcCCEEEEEcCC--HHHHHHHHHHHHHhCCHHHHhccccchhh---cchhheeeecCCCCcccCcc
Confidence 34566788999999999876 44555567778788999999998653222 11112566666666554433
No 56
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=51.66 E-value=27 Score=26.98 Aligned_cols=22 Identities=23% Similarity=0.256 Sum_probs=19.0
Q ss_pred eeeeeeeCCHHHHHHHHhcCCC
Q 038617 351 ILPIITLNNIQESIEFINSRPK 372 (484)
Q Consensus 351 vl~v~~~~~~~eai~~~n~~~~ 372 (484)
-+.|+.|+|.++|.++.|+.+|
T Consensus 55 ~~viieFpS~~aa~~~~~s~~Y 76 (99)
T 2fiu_A 55 RNVVIEFPSVQHAIDCYNSPEY 76 (99)
T ss_dssp EEEEEEESSHHHHHHHHHSHHH
T ss_pred eEEEEECCCHHHHHHHHcCHHH
Confidence 6789999999999999987544
No 57
>1s7i_A Hypothetical protein PA1349; structural genomics, protein structure initiative, pseudomon aeruginosa, MCSG, PSI; 1.80A {Pseudomonas aeruginosa} SCOP: d.58.4.9
Probab=43.41 E-value=56 Score=26.35 Aligned_cols=29 Identities=17% Similarity=0.382 Sum_probs=22.4
Q ss_pred ccceecceeeeeeeCCHHHHHHHHhcCCCC
Q 038617 344 TEEIFGPILPIITLNNIQESIEFINSRPKP 373 (484)
Q Consensus 344 ~eE~fgPvl~v~~~~~~~eai~~~n~~~~g 373 (484)
..|..|= +.|+.++|+|||++++.+.++.
T Consensus 80 tkE~lgG-~~iie~~s~deA~e~A~~~P~~ 108 (124)
T 1s7i_A 80 TKEQLGG-FYLIEARDLNQALQIAAKIPPG 108 (124)
T ss_dssp CSSEEEE-EEEEEESSHHHHHHHHTTCGGG
T ss_pred Cccccee-EEEEEeCCHHHHHHHHHhCCcc
Confidence 3466664 4567899999999999998764
No 58
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=38.82 E-value=32 Score=28.49 Aligned_cols=72 Identities=6% Similarity=0.082 Sum_probs=46.7
Q ss_pred hCCEEEEeCCcccHHHHHHHHHHhccc-cCccceeeccCC------hhHHHHHHhCCCCeEEEeCCh-----HHHHHHHH
Q 038617 135 AGNTVMLKPSELAVECASFLAETIPLY-LDCKAIKVTNGG------VDVCEQLLQQKWNKIFFTGSP-----RVGSIVMS 202 (484)
Q Consensus 135 aGN~Vvlkps~~~~~t~~~l~~~l~~a-lp~g~v~~v~g~------~~~~~~L~~~~vd~v~ftGs~-----~~g~~i~~ 202 (484)
.|-.++- +.-|+..|. +. +|-..++-++.+ ....+.+.+..||+|++|-+. .-+..|.+
T Consensus 49 lGf~i~A-----T~GTa~~L~----~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~g~i~lVInt~~~~~~~~~d~~~iRR 119 (143)
T 2yvq_A 49 EGFKLFA-----TEATSDWLN----ANNVPATPVAWPSQEGQNPSLSSIRKLIRDGSIDLVINLPNNNTKFVHDNYVIRR 119 (143)
T ss_dssp TTCEEEE-----EHHHHHHHH----HTTCCCEEECCGGGC-----CBCHHHHHHTTSCCEEEECCCCCGGGHHHHHHHHH
T ss_pred CCCEEEE-----CchHHHHHH----HcCCeEEEEEeccCCCcccccccHHHHHHCCCceEEEECCCCCCcCCccHHHHHH
Confidence 3666553 345555443 44 777666666533 345555555569999998655 36778888
Q ss_pred HHhcccCceeeec
Q 038617 203 AAAKHLTPVTLEL 215 (484)
Q Consensus 203 ~a~~~~~~~~lel 215 (484)
.|..+..|++-.+
T Consensus 120 ~Av~~~IP~~T~~ 132 (143)
T 2yvq_A 120 TAVDSGIPLLTNF 132 (143)
T ss_dssp HHHHTTCCEECSH
T ss_pred HHHHhCCCeEcCH
Confidence 8888888877554
No 59
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=32.32 E-value=22 Score=29.32 Aligned_cols=79 Identities=9% Similarity=0.063 Sum_probs=47.8
Q ss_pred HHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccccCccceeecc-C-ChhHHHHHHhCCCCeEEEeCC-------hHHHH
Q 038617 128 PLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTN-G-GVDVCEQLLQQKWNKIFFTGS-------PRVGS 198 (484)
Q Consensus 128 ~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~alp~g~v~~v~-g-~~~~~~~L~~~~vd~v~ftGs-------~~~g~ 198 (484)
+-...+.+|..++- +.-|+..|.+. ..++-..++=++ + +..+++.+.+..||+|+||=+ ..-+.
T Consensus 23 ~~~~~ll~Gf~l~A-----T~gTa~~L~e~--~Gl~v~~v~k~~~eG~p~I~d~I~~geIdlVInt~~pl~~~~h~~D~~ 95 (134)
T 2xw6_A 23 QRHREVLARFPLVA-----TGTTGRRIEEA--TGLTVEKLLSGPLGGDQQMGARVAEGRILAVIFFRDPLTAQPHEPDVQ 95 (134)
T ss_dssp HHTHHHHTTSCEEE-----CHHHHHHHHHH--HCCCCEECSCGGGTHHHHHHHHHHTTCEEEEEEECCTTTCCTTSCCSH
T ss_pred HHHHHHhCCCEEEE-----ccHHHHHHHHh--hCceEEEEEecCCCCcchHHHHHHCCCccEEEEccCcccCCCccchHH
Confidence 33345555665553 34565555542 127766665555 5 344556555556999999876 23457
Q ss_pred HHHHHHhcccCceee
Q 038617 199 IVMSAAAKHLTPVTL 213 (484)
Q Consensus 199 ~i~~~a~~~~~~~~l 213 (484)
.|.+.|..+..|+.-
T Consensus 96 ~IrR~A~~~~IP~~T 110 (134)
T 2xw6_A 96 ALLRVCDVHGVPLAT 110 (134)
T ss_dssp HHHHHHHHHTCCEEC
T ss_pred HHHHHHHHcCCCeEc
Confidence 788888777777653
No 60
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=29.89 E-value=83 Score=26.43 Aligned_cols=114 Identities=9% Similarity=0.034 Sum_probs=68.6
Q ss_pred eEEEEEccCc-hhHHHHHhHHHHHHhhCCEEEEeCCcccHHHHHHHHHHhccccCccceeeccC--ChhHHHHHHhCCCC
Q 038617 110 GVVLICSAWN-FPINLALEPLIGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNG--GVDVCEQLLQQKWN 186 (484)
Q Consensus 110 GVv~~i~p~n-~P~~~~~~~i~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~alp~g~v~~v~g--~~~~~~~L~~~~vd 186 (484)
|.|+++..=+ =+-...+.+-...+.+|..++-- .-|+..|.+. ..++-..++=++. +..+++.+.+..||
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~AT-----~gTa~~L~e~--~Gl~v~~v~k~~eGG~p~I~d~I~~geId 84 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYAT-----GTTGNLISRA--TGMNVNAMLSGPMGGDQQVGALISEGKID 84 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEEE-----TTHHHHHHHH--HCCCCEEECCGGGTHHHHHHHHHHTTCCC
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEEc-----cHHHHHHHHH--hCceeEEEEecCCCCCchHHHHHHCCCcc
Confidence 6555554433 35555555556677788887753 3455555441 1277655554432 23455555555699
Q ss_pred eEEEeCC-------hHHHHHHHHHHhcccCceeeecCCcCceEEcCCCCCCCHHHHHHHHHHhhcccCCC
Q 038617 187 KIFFTGS-------PRVGSIVMSAAAKHLTPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNG 249 (484)
Q Consensus 187 ~v~ftGs-------~~~g~~i~~~a~~~~~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~~~~~~~G 249 (484)
+|+||-+ ..-+..|.+.|..+..|+.--+ ..++.++.+.++ +..
T Consensus 85 lVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~l------------------atA~a~v~ai~~-~~~ 135 (152)
T 1b93_A 85 VLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATNV------------------ATADFIIQSPHF-NDA 135 (152)
T ss_dssp EEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEESSH------------------HHHHHHHTSGGG-GSC
T ss_pred EEEEcCCcccCCcccccHHHHHHHHHHcCCCEEeCH------------------HHHHHHHHHHhc-ccc
Confidence 9999866 3467888888887777755322 346667777776 443
No 61
>3lo3_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.38A {Colwellia psychrerythraea} SCOP: d.58.4.0
Probab=27.35 E-value=88 Score=23.69 Aligned_cols=23 Identities=9% Similarity=0.166 Sum_probs=19.9
Q ss_pred ceeeeeeeCCHHHHHHHHhcCCC
Q 038617 350 PILPIITLNNIQESIEFINSRPK 372 (484)
Q Consensus 350 Pvl~v~~~~~~~eai~~~n~~~~ 372 (484)
.-+.|+.|+|.+.|.++.|+..|
T Consensus 53 ~~~viieFps~~aa~a~y~SpeY 75 (94)
T 3lo3_A 53 KAQVILEFPSREDAYNWYHSEEY 75 (94)
T ss_dssp SEEEEEEESSHHHHHHHHHSHHH
T ss_pred CeEEEEECCCHHHHHHHHCCHHH
Confidence 57789999999999999987654
No 62
>3fgh_A Transcription factor A, mitochondrial; HMG domain, mitochondrial transcription, activator, DNA- binding, mitochondrion, phosphoprotein; 1.35A {Homo sapiens}
Probab=26.71 E-value=70 Score=22.24 Aligned_cols=37 Identities=8% Similarity=-0.070 Sum_probs=27.4
Q ss_pred HHHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHH
Q 038617 14 ELRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFK 50 (484)
Q Consensus 14 ~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~ 50 (484)
.++.....|..+|.++|..+.......-+++..++..
T Consensus 29 i~k~lg~~Wk~ls~~eK~~y~~~A~~~k~~Y~~e~~~ 65 (67)
T 3fgh_A 29 KLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMKS 65 (67)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455667799999999999888777766666665543
No 63
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=26.51 E-value=1.6e+02 Score=27.82 Aligned_cols=59 Identities=19% Similarity=0.173 Sum_probs=39.4
Q ss_pred CCCCeEEEeCChHHHHHHHHHHh----cccCcee-eecC-CcCce-EEcCCCCCCCHHHHHHHHHHhhc
Q 038617 183 QKWNKIFFTGSPRVGSIVMSAAA----KHLTPVT-LELG-GKCPA-ILDTLSSPLDIKVTVKRIIGGKF 244 (484)
Q Consensus 183 ~~vd~v~ftGs~~~g~~i~~~a~----~~~~~~~-lelg-G~~p~-iV~~~~~daDl~~aa~~i~~~~~ 244 (484)
...|.|+.-|+..|-..+++... ....|+. +=+| ||.-+ -+.- ..|++.+++.++.+.+
T Consensus 81 ~~~d~vvv~GGDGTl~~v~~~l~~~~~~~~~plgiiP~Gt~N~fa~~l~i---~~~~~~al~~i~~g~~ 146 (332)
T 2bon_A 81 FGVATVIAGGGDGTINEVSTALIQCEGDDIPALGILPLGTANDFATSVGI---PEALDKALKLAIAGDA 146 (332)
T ss_dssp HTCSEEEEEESHHHHHHHHHHHHHCCSSCCCEEEEEECSSSCHHHHHTTC---CSSHHHHHHHHHHSEE
T ss_pred cCCCEEEEEccchHHHHHHHHHhhcccCCCCeEEEecCcCHHHHHHhcCC---CCCHHHHHHHHHcCCe
Confidence 34799999999999999988776 3334543 3344 33222 1221 3478999999988766
No 64
>2co9_A Thymus high mobility group box protein TOX; TOX protein, HMG box domain, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=24.92 E-value=1.7e+02 Score=22.31 Aligned_cols=43 Identities=0% Similarity=-0.244 Sum_probs=31.2
Q ss_pred HHHHhHhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcC
Q 038617 15 LRQTFRSGITKSVAWRKNQLRALIELLQDNEDKIFKALHQDLG 57 (484)
Q Consensus 15 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~G 57 (484)
++.....|..++.++|..+...+...-+++..++...-....-
T Consensus 49 sk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~~Y~~~~~~ 91 (102)
T 2co9_A 49 SKIVASMWDGLGEEQKQVYKKKTEAAKKEYLKQLAAYRASLVS 91 (102)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 4445567999999999999888887777777776665544433
No 65
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=24.73 E-value=44 Score=27.30 Aligned_cols=46 Identities=22% Similarity=0.227 Sum_probs=30.4
Q ss_pred cceeeccCChhH-HHHHHh-CCCCeEEEeCChHHHHHHHHHHhcccCc
Q 038617 165 KAIKVTNGGVDV-CEQLLQ-QKWNKIFFTGSPRVGSIVMSAAAKHLTP 210 (484)
Q Consensus 165 g~v~~v~g~~~~-~~~L~~-~~vd~v~ftGs~~~g~~i~~~a~~~~~~ 210 (484)
|.+++++|+.+. -..+++ .++..|++||+...-..+.+.|-+...|
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~~~~ip 100 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAEERGVP 100 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHHHHTCC
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHHHCCCe
Confidence 567777775543 334444 4588999999988777777776554433
No 66
>3hhl_A RPA0582; alpha-beta-barrel, structural genomics, PSI-2, protein struc initiative, reductive methylation; HET: MLY MLZ PGE 2PE PE8 1PE PG4; 2.65A {Rhodopseudomonas palustris} PDB: 3hhl_B* 3hhl_C* 3dca_A
Probab=22.36 E-value=1e+02 Score=25.46 Aligned_cols=65 Identities=12% Similarity=0.132 Sum_probs=40.1
Q ss_pred ccCHHHHHHHHHHhhchh--cCCceeeCCCcCCCCCeeeeEEEeCCCCCCcccccceecceeeeeeeCCHHHHHHHHhcC
Q 038617 293 IINEYHFERLRKLLKDPL--VADAIVHGGLLDKENLFIEPTILLDPPLDAEIMTEEIFGPILPIITLNNIQESIEFINSR 370 (484)
Q Consensus 293 li~~~~~~~~~~~i~~a~--~~~~~~~gg~~~~~g~~~~Ptil~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~ 370 (484)
+.+++.+++..+....+. .|++++.-|.. +.++.+... |.+ .-+.|+.|+|.+.|+++.|+.
T Consensus 45 vtd~e~y~~Y~~~~~~~l~~~GG~~l~rG~~--------~~~lEG~~~-------e~~-~~~viieFPS~~aa~a~y~Sp 108 (143)
T 3hhl_A 45 TTGAEAYAAYGRDSGPVSERLGGXVVWQGQF--------ELMLIGPQD-------EHW-DHVFIAEYPSVAAFVEMIRDP 108 (143)
T ss_dssp CBHHHHHHHHHHHHHHHHHHTTCEEEEEEEE--------EEEEESCTT-------CCC-SEEEEEEESCHHHHHHHHHCH
T ss_pred cCCHHHHHHHHHHHHHHHHHcCCEEEeecCC--------ceeEECCCC-------CCC-CeEEEEECCCHHHHHHHHcCH
Confidence 455666666666665543 26776654432 234444221 112 477899999999999998876
Q ss_pred CCC
Q 038617 371 PKP 373 (484)
Q Consensus 371 ~~g 373 (484)
.|.
T Consensus 109 eYq 111 (143)
T 3hhl_A 109 VYR 111 (143)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 67
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=21.86 E-value=74 Score=20.69 Aligned_cols=28 Identities=25% Similarity=0.395 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHhcHHHHHHHHHHHcC
Q 038617 30 RKNQLRALIELLQDNEDKIFKALHQDLG 57 (484)
Q Consensus 30 R~~~L~~~a~~l~~~~~~la~~~~~e~G 57 (484)
..++|..+...|.+-.++|++++..|..
T Consensus 13 KqEIL~E~RkElqK~K~EIIeAi~~El~ 40 (45)
T 1use_A 13 KQELLEEVKKELQKVKEEIIEAFVQELR 40 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3578888888888888888888877654
No 68
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=21.29 E-value=2.3e+02 Score=25.83 Aligned_cols=88 Identities=10% Similarity=0.026 Sum_probs=53.0
Q ss_pred EEEeCCcccHHHHHHHHHHhccccCccceeeccCChhHHHHHHhCCCCeEEEeCChHHHHHHHHHHhcc--cCcee-eec
Q 038617 139 VMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQKWNKIFFTGSPRVGSIVMSAAAKH--LTPVT-LEL 215 (484)
Q Consensus 139 Vvlkps~~~~~t~~~l~~~l~~alp~g~v~~v~g~~~~~~~L~~~~vd~v~ftGs~~~g~~i~~~a~~~--~~~~~-lel 215 (484)
+|.+|++.+......+.+.+.+. | +.+. ....|.|+.-|+..+-...++..... .+|++ .-+
T Consensus 5 ii~n~~~~~~~~~~~l~~~l~~~---g-~~v~-----------~~~~D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~ 69 (272)
T 2i2c_A 5 ITSKGDEKSDLLRLNMIAGFGEY---D-MEYD-----------DVEPEIVISIGGDGTFLSAFHQYEERLDEIAFIGIHT 69 (272)
T ss_dssp EEECCSHHHHHHHHHHHHHHTTS---S-CEEC-----------SSSCSEEEEEESHHHHHHHHHHTGGGTTTCEEEEEES
T ss_pred EEECCCHHHHHHHHHHHHHHHHC---C-CEeC-----------CCCCCEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeC
Confidence 55666554444455555555443 1 1110 12479999999999999888877654 56744 444
Q ss_pred CCcCceEE-cCCCCCCCHHHHHHHHHHhhcc
Q 038617 216 GGKCPAIL-DTLSSPLDIKVTVKRIIGGKFA 245 (484)
Q Consensus 216 gG~~p~iV-~~~~~daDl~~aa~~i~~~~~~ 245 (484)
|-.+ ++- .. ..|++.+++.+..+.+.
T Consensus 70 G~lg-fl~~~~---~~~~~~~l~~l~~g~~~ 96 (272)
T 2i2c_A 70 GHLG-FYADWR---PAEADKLVKLLAKGEYQ 96 (272)
T ss_dssp SSCC-SSCCBC---GGGHHHHHHHHHTTCCE
T ss_pred CCCC-cCCcCC---HHHHHHHHHHHHcCCCE
Confidence 4333 221 12 35789999999887543
No 69
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=20.58 E-value=4.5e+02 Score=24.86 Aligned_cols=124 Identities=8% Similarity=-0.002 Sum_probs=67.1
Q ss_pred HHHHhhCCEEEEeCCcccHHHHHHHHHHhccccCccceeeccCChhHHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccc
Q 038617 130 IGAIAAGNTVMLKPSELAVECASFLAETIPLYLDCKAIKVTNGGVDVCEQLLQQK-WNKIFFTGSPRVGSIVMSAAAKHL 208 (484)
Q Consensus 130 ~~ALaaGN~Vvlkps~~~~~t~~~l~~~l~~alp~g~v~~v~g~~~~~~~L~~~~-vd~v~ftGs~~~g~~i~~~a~~~~ 208 (484)
++++...+.-|+--....+..+..+++.+. ...+. ...+.|++.+ +|.|+....+.....+...+.+.+
T Consensus 43 ~~~~~~~~~~lvav~d~~~~~a~~~a~~~~------~~~~~----~~~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aG 112 (361)
T 3u3x_A 43 VNCLLRAGARLAGFHEKDDALAAEFSAVYA------DARRI----ATAEEILEDENIGLIVSAAVSSERAELAIRAMQHG 112 (361)
T ss_dssp HHHHHHTTCEEEEEECSCHHHHHHHHHHSS------SCCEE----SCHHHHHTCTTCCEEEECCCHHHHHHHHHHHHHTT
T ss_pred HHHhhcCCcEEEEEEcCCHHHHHHHHHHcC------CCccc----CCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHCC
Confidence 344443444443334445555555555432 11111 2346677765 999999988988888888888777
Q ss_pred CceeeecCCcCceEEcCCCCCCCHHHHHHHHHHhhcccCCCCccccCCceEEccchHH-HHHHHHHHHHHhhcCC
Q 038617 209 TPVTLELGGKCPAILDTLSSPLDIKVTVKRIIGGKFASCNGQVCVGVDYILVEKKFAA-TLIESLKTTIKKFYGE 282 (484)
Q Consensus 209 ~~~~lelgG~~p~iV~~~~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~-~f~~~l~~~~~~~~~g 282 (484)
|++++|-. ...+++.+-+ ++..+- .+|..+ .+-+...++ ..+..+++.+..-.+|
T Consensus 113 khVl~EKP-----------la~~~~ea~~-l~~~a~--~~g~~l-----~v~~~~R~~~p~~~~~k~~i~~g~iG 168 (361)
T 3u3x_A 113 KDVLVDKP-----------GMTSFDQLAK-LRRVQA--ETGRIF-----SILYSEHFESPATVKAGELVAAGAIG 168 (361)
T ss_dssp CEEEEESC-----------SCSSHHHHHH-HHHHHH--TTCCCE-----EEECHHHHTCHHHHHHHHHHHTTTTS
T ss_pred CeEEEeCC-----------CCCCHHHHHH-HHHHHH--HcCCEE-----EEechHhhCCHHHHHHHHHHHcCCCC
Confidence 77666632 1345555444 333322 344321 222333354 6666777766643333
Done!