Query 038619
Match_columns 129
No_of_seqs 116 out of 1028
Neff 7.0
Searched_HMMs 46136
Date Fri Mar 29 12:53:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038619.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038619hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02216 protein SRG1 100.0 1.5E-43 3.2E-48 286.8 10.8 126 3-128 209-340 (357)
2 PLN03001 oxidoreductase, 2OG-F 100.0 1.5E-43 3.3E-48 276.5 10.0 125 3-128 115-245 (262)
3 PLN02947 oxidoreductase 100.0 2.7E-43 5.9E-48 286.8 11.4 125 3-128 224-354 (374)
4 PLN02639 oxidoreductase, 2OG-F 100.0 3.3E-43 7.1E-48 282.7 10.5 126 3-128 189-320 (337)
5 PLN02254 gibberellin 3-beta-di 100.0 4.7E-43 1E-47 284.0 9.9 125 3-128 209-340 (358)
6 PLN02758 oxidoreductase, 2OG-F 100.0 9.1E-43 2E-47 282.5 11.0 126 3-128 210-342 (361)
7 PLN02997 flavonol synthase 100.0 1.2E-42 2.6E-47 278.5 10.5 124 4-128 183-312 (325)
8 PLN02276 gibberellin 20-oxidas 100.0 1.6E-42 3.4E-47 281.0 10.7 125 3-128 205-335 (361)
9 PLN02393 leucoanthocyanidin di 100.0 2E-42 4.3E-47 280.6 10.7 125 4-128 213-343 (362)
10 PLN02704 flavonol synthase 100.0 1.2E-42 2.5E-47 279.3 9.1 124 4-128 199-328 (335)
11 PLN02912 oxidoreductase, 2OG-F 100.0 1.9E-42 4.2E-47 279.4 10.0 125 3-128 196-328 (348)
12 PLN02299 1-aminocyclopropane-1 100.0 2.2E-42 4.8E-47 276.5 9.2 125 4-128 158-290 (321)
13 PLN02365 2-oxoglutarate-depend 100.0 3.4E-42 7.4E-47 273.0 10.0 125 4-128 149-281 (300)
14 KOG0143 Iron/ascorbate family 100.0 6.5E-42 1.4E-46 274.1 10.4 126 3-129 175-307 (322)
15 PLN02904 oxidoreductase 100.0 6.1E-42 1.3E-46 277.4 10.2 124 3-128 207-337 (357)
16 PLN02750 oxidoreductase, 2OG-F 100.0 8.5E-42 1.9E-46 275.2 10.5 125 3-128 192-324 (345)
17 PLN02156 gibberellin 2-beta-di 100.0 1.2E-41 2.6E-46 273.7 10.7 125 3-128 177-310 (335)
18 PLN03178 leucoanthocyanidin di 100.0 6.4E-42 1.4E-46 277.3 9.1 125 3-128 210-341 (360)
19 PLN02485 oxidoreductase 100.0 2.7E-41 5.9E-46 270.5 10.0 126 3-128 183-321 (329)
20 PLN00417 oxidoreductase, 2OG-F 100.0 4.8E-41 1E-45 271.3 10.5 122 4-125 203-330 (348)
21 PLN03002 oxidoreductase, 2OG-F 100.0 7.4E-41 1.6E-45 268.7 10.3 124 3-128 181-316 (332)
22 PLN02515 naringenin,2-oxogluta 100.0 1.1E-40 2.3E-45 270.2 11.0 124 3-128 194-325 (358)
23 PTZ00273 oxidase reductase; Pr 100.0 2.1E-40 4.5E-45 264.4 10.2 124 3-128 176-307 (320)
24 PLN02984 oxidoreductase, 2OG-F 100.0 1.6E-38 3.5E-43 256.1 10.0 115 3-128 199-320 (341)
25 PLN02403 aminocyclopropanecarb 100.0 1.5E-38 3.3E-43 252.8 9.7 118 4-128 153-278 (303)
26 COG3491 PcbC Isopenicillin N s 100.0 4.8E-35 1E-39 231.0 8.6 117 3-120 173-297 (322)
27 PF03171 2OG-FeII_Oxy: 2OG-Fe( 99.9 3.4E-26 7.5E-31 153.2 7.4 91 4-98 2-98 (98)
28 PF13640 2OG-FeII_Oxy_3: 2OG-F 97.4 0.00019 4.1E-09 47.5 3.3 79 6-97 1-100 (100)
29 PRK05467 Fe(II)-dependent oxyg 94.7 0.14 2.9E-06 39.7 6.6 78 5-96 81-176 (226)
30 smart00702 P4Hc Prolyl 4-hydro 94.4 0.27 5.9E-06 35.6 7.3 83 4-97 83-178 (178)
31 PF12851 Tet_JBP: Oxygenase do 94.0 0.22 4.9E-06 36.7 6.3 70 21-97 85-170 (171)
32 PRK15401 alpha-ketoglutarate-d 92.3 1 2.2E-05 34.6 7.7 79 3-94 115-210 (213)
33 PF13532 2OG-FeII_Oxy_2: 2OG-F 91.1 1.1 2.3E-05 32.7 6.5 79 3-94 96-193 (194)
34 PF13759 2OG-FeII_Oxy_5: Putat 87.7 0.74 1.6E-05 30.5 3.2 37 50-94 63-100 (101)
35 TIGR02466 conserved hypothetic 84.7 1.4 3.1E-05 33.4 3.7 38 51-96 160-198 (201)
36 TIGR00568 alkb DNA alkylation 61.8 30 0.00066 25.4 5.7 59 3-69 94-162 (169)
37 COG3695 Predicted methylated D 54.5 4.5 9.8E-05 27.6 0.2 26 65-92 41-69 (103)
38 PF05118 Asp_Arg_Hydrox: Aspar 53.6 49 0.0011 23.8 5.6 32 63-94 118-157 (163)
39 PF02678 Pirin: Pirin; InterP 48.8 47 0.001 22.6 4.5 56 18-86 39-96 (107)
40 PLN00052 prolyl 4-hydroxylase; 43.5 87 0.0019 25.3 6.0 43 53-99 206-253 (310)
41 COG2140 Thermophilic glucose-6 41.8 88 0.0019 24.0 5.5 66 5-76 91-163 (209)
42 smart00460 TGc Transglutaminas 37.6 36 0.00079 19.9 2.4 17 43-59 52-68 (68)
43 PF14402 7TM_transglut: 7 tran 31.2 86 0.0019 25.6 4.1 52 41-94 32-84 (313)
44 COG1741 Pirin-related protein 29.1 2.4E+02 0.0053 22.4 6.4 18 20-37 56-73 (276)
45 TIGR02451 anti_sig_ChrR anti-s 26.6 1E+02 0.0022 23.3 3.7 10 48-57 166-175 (215)
46 PF11142 DUF2917: Protein of u 24.8 1.7E+02 0.0037 17.7 4.7 33 44-76 20-52 (63)
47 PF15390 DUF4613: Domain of un 23.6 1.7E+02 0.0037 26.2 4.8 56 20-76 115-184 (671)
48 PF12852 Cupin_6: Cupin 23.0 2.1E+02 0.0045 20.4 4.7 40 43-83 37-77 (186)
49 PF02373 JmjC: JmjC domain, hy 21.6 1E+02 0.0022 19.9 2.5 33 41-73 78-111 (114)
50 PF11876 DUF3396: Protein of u 21.5 18 0.00039 27.4 -1.3 44 26-69 104-152 (208)
No 1
>PLN02216 protein SRG1
Probab=100.00 E-value=1.5e-43 Score=286.77 Aligned_cols=126 Identities=48% Similarity=0.766 Sum_probs=120.1
Q ss_pred CceEEeeecCCCCCCCCccccccccCCCCeeEEeeCCCcceeEEEeCCeeEEecCCCCeeEeecccceecccCC----cc
Q 038619 3 LEPLAMNPISQMGKPEKVIRLTPHSDGSTLTILLQVCEVEGLQIKKDGKWTSVSPLRNAFIVNIGDMFEVLTIS----IN 78 (129)
Q Consensus 3 ~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTll~qd~~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~l~~~tng----~~ 78 (129)
.+.||++|||||++++..+|+++|||+|+||||+||++++||||+++|+|++|+|.+|++|||+||+||+|||| ++
T Consensus 209 ~~~lRl~~YPp~p~~~~~~G~~~HtD~g~lTlL~q~~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~L~~~TNG~~kS~~ 288 (357)
T PLN02216 209 GQSIRMNYYPPCPQPDQVIGLTPHSDAVGLTILLQVNEVEGLQIKKDGKWVSVKPLPNALVVNVGDILEIITNGTYRSIE 288 (357)
T ss_pred hheeEEeecCCCCCcccccCccCcccCceEEEEEecCCCCceeEEECCEEEECCCCCCeEEEEcchhhHhhcCCeeeccC
Confidence 35899999999998888999999999999999999656999999999999999999999999999999999999 99
Q ss_pred eeecCCCCCCCceeEeeeeCC--eEEecCCcccCCCCCCCCccccHHHHhhc
Q 038619 79 QWELPSASQERISISTFYKAR--YEEHPASSLISEETPALFRRVTVEEYLRG 128 (129)
Q Consensus 79 HRV~~~~~~~R~S~~~f~~p~--~~i~pl~~~~~~~~~~~y~~~~~~dyl~~ 128 (129)
|||+.++.++|||++||+.|+ ++|+|+++++++++|++|++++++||++.
T Consensus 289 HRVv~~~~~~R~Si~~F~~P~~d~~i~p~~~lv~~~~p~~Y~~~t~~ey~~~ 340 (357)
T PLN02216 289 HRGVVNSEKERLSVATFHNTGMGKEIGPAKSLVERQKAALFKSLTTKEYFDG 340 (357)
T ss_pred ceeecCCCCCEEEEEEEecCCCCCeEeCcHHHcCCCCCCCCCCcCHHHHHHH
Confidence 999988888999999999999 99999999999999999999999999864
No 2
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.5e-43 Score=276.54 Aligned_cols=125 Identities=30% Similarity=0.511 Sum_probs=118.8
Q ss_pred CceEEeeecCCCCCCCCccccccccCCCCeeEEeeCCCcceeEEEeCCeeEEecCCCCeeEeecccceecccCC----cc
Q 038619 3 LEPLAMNPISQMGKPEKVIRLTPHSDGSTLTILLQVCEVEGLQIKKDGKWTSVSPLRNAFIVNIGDMFEVLTIS----IN 78 (129)
Q Consensus 3 ~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTll~qd~~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~l~~~tng----~~ 78 (129)
.+.||++||||++.++..+|+++|||.|+||||+|| +++||||+++|+|++|+|.+|++|||+||+|++|||| ++
T Consensus 115 ~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd-~v~GLqV~~~g~Wi~V~p~p~a~vVNiGD~l~~~tng~~~S~~ 193 (262)
T PLN03001 115 YQNITVSYYPPCPQPELTLGLQSHSDFGAITLLIQD-DVEGLQLLKDAEWLMVPPISDAILIIIADQTEIITNGNYKSAQ 193 (262)
T ss_pred chhheeecCCCCCCcccccCCcCCcCCCeeEEEEeC-CCCceEEeeCCeEEECCCCCCcEEEEccHHHHHHhCCcccccc
Confidence 357999999999988889999999999999999996 5899999999999999999999999999999999999 99
Q ss_pred eeecCCCCCCCceeEeeeeCC--eEEecCCcccCCCCCCCCccccHHHHhhc
Q 038619 79 QWELPSASQERISISTFYKAR--YEEHPASSLISEETPALFRRVTVEEYLRG 128 (129)
Q Consensus 79 HRV~~~~~~~R~S~~~f~~p~--~~i~pl~~~~~~~~~~~y~~~~~~dyl~~ 128 (129)
|||+.+..++|||++||+.|+ ++|+|+++++++++|++|++++++||++.
T Consensus 194 HRVv~~~~~~R~Sia~F~~p~~d~~i~p~~e~v~~~~p~~y~~~~~~e~l~~ 245 (262)
T PLN03001 194 HRAIANANKARLSVATFHDPAKTAKIAPASALSTESFPPRYCEIVYGEYVSS 245 (262)
T ss_pred ceEEcCCCCCEEEEEEEEcCCCCCEEeCChHhcCCCCCCcCCCccHHHHHHH
Confidence 999998888999999999999 99999999999999999999999999864
No 3
>PLN02947 oxidoreductase
Probab=100.00 E-value=2.7e-43 Score=286.77 Aligned_cols=125 Identities=30% Similarity=0.520 Sum_probs=120.2
Q ss_pred CceEEeeecCCCCCCCCccccccccCCCCeeEEeeCCCcceeEEEeCCeeEEecCCCCeeEeecccceecccCC----cc
Q 038619 3 LEPLAMNPISQMGKPEKVIRLTPHSDGSTLTILLQVCEVEGLQIKKDGKWTSVSPLRNAFIVNIGDMFEVLTIS----IN 78 (129)
Q Consensus 3 ~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTll~qd~~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~l~~~tng----~~ 78 (129)
.+.||+||||||++++..+|+++|||.|+||||+|| +++||||+++|+|++|+|.+|++|||+||+||+|||| ++
T Consensus 224 ~~~lrln~YPp~p~~~~~~G~~~HTD~g~lTlL~Qd-~v~GLQV~~~g~Wi~V~p~pga~VVNvGD~Lq~~SNG~~kS~~ 302 (374)
T PLN02947 224 SQMMVVNCYPACPEPELTLGMPPHSDYGFLTLLLQD-EVEGLQIMHAGRWVTVEPIPGSFVVNVGDHLEIFSNGRYKSVL 302 (374)
T ss_pred ceeeeeecCCCCCCcccccCCCCccCCCceEEEEec-CCCCeeEeECCEEEeCCCCCCeEEEEeCceeeeeeCCEEeccc
Confidence 468999999999998889999999999999999996 6999999999999999999999999999999999999 99
Q ss_pred eeecCCCCCCCceeEeeeeCC--eEEecCCcccCCCCCCCCccccHHHHhhc
Q 038619 79 QWELPSASQERISISTFYKAR--YEEHPASSLISEETPALFRRVTVEEYLRG 128 (129)
Q Consensus 79 HRV~~~~~~~R~S~~~f~~p~--~~i~pl~~~~~~~~~~~y~~~~~~dyl~~ 128 (129)
|||+.++.++|||++||+.|+ ++|+|+++++++++|++|++++++||+++
T Consensus 303 HRVv~~~~~~R~Sia~F~~P~~d~~i~Pl~~lv~~~~p~~Y~~~~~~ey~~~ 354 (374)
T PLN02947 303 HRVRVNSTKPRISVASLHSLPFERVVGPAPELVDEQNPRRYMDTDFATFLAY 354 (374)
T ss_pred cccccCCCCCEEEEEEEecCCCCCEEeCChHhcCCCCCCcCCCCCHHHHHHH
Confidence 999998888999999999999 99999999999999999999999999975
No 4
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=3.3e-43 Score=282.67 Aligned_cols=126 Identities=35% Similarity=0.550 Sum_probs=119.5
Q ss_pred CceEEeeecCCCCCCCCccccccccCCCCeeEEeeCCCcceeEEEeCCeeEEecCCCCeeEeecccceecccCC----cc
Q 038619 3 LEPLAMNPISQMGKPEKVIRLTPHSDGSTLTILLQVCEVEGLQIKKDGKWTSVSPLRNAFIVNIGDMFEVLTIS----IN 78 (129)
Q Consensus 3 ~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTll~qd~~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~l~~~tng----~~ 78 (129)
.+.||++||||++.++..+|+++|||+|+||||+||++++||||+++|+|++|+|.+|++|||+||+||+|||| ++
T Consensus 189 ~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pg~lVVNiGD~L~~~TNG~~kSt~ 268 (337)
T PLN02639 189 GQHMAVNYYPPCPEPELTYGLPAHTDPNALTILLQDQQVAGLQVLKDGKWVAVNPHPGAFVINIGDQLQALSNGRYKSVW 268 (337)
T ss_pred ccEEEEEcCCCCCCcccccCCCCCcCCCceEEEEecCCcCceEeecCCeEEeccCCCCeEEEechhHHHHHhCCeeeccC
Confidence 46899999999998888899999999999999999645899999999999999999999999999999999999 99
Q ss_pred eeecCCCCCCCceeEeeeeCC--eEEecCCcccCCCCCCCCccccHHHHhhc
Q 038619 79 QWELPSASQERISISTFYKAR--YEEHPASSLISEETPALFRRVTVEEYLRG 128 (129)
Q Consensus 79 HRV~~~~~~~R~S~~~f~~p~--~~i~pl~~~~~~~~~~~y~~~~~~dyl~~ 128 (129)
|||+.++.++|||++||+.|+ ++|+|+++++++++|++|++++++||++.
T Consensus 269 HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~~~~~~~p~~y~p~~~~e~~~~ 320 (337)
T PLN02639 269 HRAVVNTDKERMSVASFLCPCDDAVISPAKKLTDDGTAAVYRDFTYAEYYKK 320 (337)
T ss_pred cccccCCCCCEEEEEEEecCCCCceEeCchHHcCCCCCCCCCCCCHHHHHHH
Confidence 999988888999999999999 99999999999999999999999999865
No 5
>PLN02254 gibberellin 3-beta-dioxygenase
Probab=100.00 E-value=4.7e-43 Score=283.98 Aligned_cols=125 Identities=32% Similarity=0.632 Sum_probs=118.7
Q ss_pred CceEEeeecCCCCCCCCccccccccCCCCeeEEeeCCCcceeEEEeCC-eeEEecCCCCeeEeecccceecccCC----c
Q 038619 3 LEPLAMNPISQMGKPEKVIRLTPHSDGSTLTILLQVCEVEGLQIKKDG-KWTSVSPLRNAFIVNIGDMFEVLTIS----I 77 (129)
Q Consensus 3 ~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTll~qd~~~~GLqv~~~g-~W~~v~~~~~~~vvn~Gd~l~~~tng----~ 77 (129)
.+.||+||||||++++..+|+++|||+|+||||+|| +++||||+++| +|++|+|.+|++|||+||+||+|||| +
T Consensus 209 ~~~lRl~~YPp~p~~~~~~G~~~HtD~g~lTiL~Qd-~v~GLQV~~~~~~Wi~V~p~pgalVVNiGD~lq~~SNg~~kS~ 287 (358)
T PLN02254 209 QAALQLNSYPVCPDPDRAMGLAPHTDSSLLTILYQS-NTSGLQVFREGVGWVTVPPVPGSLVVNVGDLLHILSNGRFPSV 287 (358)
T ss_pred ceeEEEecCCCCCCcccccCcCCccCCCcEEEEecC-CCCCceEECCCCEEEEcccCCCCEEEEhHHHHHHHhCCeeccc
Confidence 368999999999988889999999999999999996 69999999866 89999999999999999999999999 9
Q ss_pred ceeecCCCCCCCceeEeeeeCC--eEEecCCcccCCCCCCCCccccHHHHhhc
Q 038619 78 NQWELPSASQERISISTFYKAR--YEEHPASSLISEETPALFRRVTVEEYLRG 128 (129)
Q Consensus 78 ~HRV~~~~~~~R~S~~~f~~p~--~~i~pl~~~~~~~~~~~y~~~~~~dyl~~ 128 (129)
+|||+.++.++|||++||+.|+ ++|+|+++++++++|++|++++++||++.
T Consensus 288 ~HRVv~~~~~~R~Sia~F~~P~~d~~i~pl~~lv~~~~p~~Y~~~t~~ey~~~ 340 (358)
T PLN02254 288 LHRAVVNKTRHRISVAYFYGPPSDVQISPLPKLVDPNHPPLYRSVTWKEYLAT 340 (358)
T ss_pred cceeecCCCCCEEEEEEEecCCCCcEEeCcHHhcCCCCCcccCCcCHHHHHHH
Confidence 9999999889999999999999 99999999999999999999999999864
No 6
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=9.1e-43 Score=282.49 Aligned_cols=126 Identities=40% Similarity=0.670 Sum_probs=119.7
Q ss_pred CceEEeeecCCCCCCCCccccccccCCCCeeEEeeCC-CcceeEEEeCCeeEEecCCCCeeEeecccceecccCC----c
Q 038619 3 LEPLAMNPISQMGKPEKVIRLTPHSDGSTLTILLQVC-EVEGLQIKKDGKWTSVSPLRNAFIVNIGDMFEVLTIS----I 77 (129)
Q Consensus 3 ~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTll~qd~-~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~l~~~tng----~ 77 (129)
.+.||++|||||++++..+|+++|||.|+||||+||+ +++||||+++|+|++|+|.+|++|||+||+||+|||| +
T Consensus 210 ~~~lR~~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~~~v~GLQV~~~g~Wi~V~p~pgalVVNiGD~L~~~SNG~~kS~ 289 (361)
T PLN02758 210 VQAVRMNYYPPCSRPDLVLGLSPHSDGSALTVLQQGKGSCVGLQILKDNTWVPVHPVPNALVINIGDTLEVLTNGKYKSV 289 (361)
T ss_pred cceeeeecCCCCCCcccccCccCccCCceeEEEEeCCCCCCCeeeeeCCEEEeCCCCCCeEEEEccchhhhhcCCeeecc
Confidence 4689999999999888899999999999999999974 4889999999999999999999999999999999999 9
Q ss_pred ceeecCCCCCCCceeEeeeeCC--eEEecCCcccCCCCCCCCccccHHHHhhc
Q 038619 78 NQWELPSASQERISISTFYKAR--YEEHPASSLISEETPALFRRVTVEEYLRG 128 (129)
Q Consensus 78 ~HRV~~~~~~~R~S~~~f~~p~--~~i~pl~~~~~~~~~~~y~~~~~~dyl~~ 128 (129)
+|||+.++.++|||++||+.|+ ++|+|+++++++++|++|++++++||+.+
T Consensus 290 ~HRVv~~~~~~R~Sia~F~~P~~d~~i~pl~elv~~~~p~~Y~~~~~~ey~~~ 342 (361)
T PLN02758 290 EHRAVTNKEKDRLSIVTFYAPSYEVELGPMPELVDDENPCKYRRYNHGEYSRH 342 (361)
T ss_pred cceeecCCCCCEEEEEEEecCCCCCeEeCCHHHcCCCCCCcCCCccHHHHHHH
Confidence 9999988888999999999999 99999999999999999999999999974
No 7
>PLN02997 flavonol synthase
Probab=100.00 E-value=1.2e-42 Score=278.47 Aligned_cols=124 Identities=27% Similarity=0.397 Sum_probs=118.7
Q ss_pred ceEEeeecCCCCCCCCccccccccCCCCeeEEeeCCCcceeEEEeCCeeEEecCCCCeeEeecccceecccCC----cce
Q 038619 4 EPLAMNPISQMGKPEKVIRLTPHSDGSTLTILLQVCEVEGLQIKKDGKWTSVSPLRNAFIVNIGDMFEVLTIS----INQ 79 (129)
Q Consensus 4 ~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTll~qd~~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~l~~~tng----~~H 79 (129)
+.||++||||++.++..+|+++|||+|+||||+|| +++||||+++|+|++|+|.+|++|||+||+||+|||| ++|
T Consensus 183 ~~lRl~~YP~~~~~~~~~g~~~HTD~g~lTlL~Qd-~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~Le~~TNG~~kSt~H 261 (325)
T PLN02997 183 YVLRVNFYPPTQDTELVIGAAAHSDMGAIALLIPN-EVPGLQAFKDEQWLDLNYINSAVVVIIGDQLMRMTNGRFKNVLH 261 (325)
T ss_pred ceeeeecCCCCCCcccccCccCccCCCceEEEecC-CCCCEEEeECCcEEECCCCCCeEEEEechHHHHHhCCccccccc
Confidence 47999999999988888999999999999999996 6999999999999999999999999999999999999 999
Q ss_pred eecCCCCCCCceeEeeeeCC--eEEecCCcccCCCCCCCCccccHHHHhhc
Q 038619 80 WELPSASQERISISTFYKAR--YEEHPASSLISEETPALFRRVTVEEYLRG 128 (129)
Q Consensus 80 RV~~~~~~~R~S~~~f~~p~--~~i~pl~~~~~~~~~~~y~~~~~~dyl~~ 128 (129)
||+.++++.|||++||+.|+ ++|+|+++++++++|++|++++++||++.
T Consensus 262 RVv~~~~~~R~Si~fF~~P~~d~~i~Plp~~v~~~~p~~y~~~~~~e~l~~ 312 (325)
T PLN02997 262 RAKTDKERLRISWPVFVAPRADMSVGPLPELTGDENPPKFETLIYNDYIDQ 312 (325)
T ss_pred eeeCCCCCCEEEEEEEecCCCCCeEeCChHHcCCCCCCcCCCccHHHHHHH
Confidence 99988888999999999999 99999999999999999999999999875
No 8
>PLN02276 gibberellin 20-oxidase
Probab=100.00 E-value=1.6e-42 Score=281.02 Aligned_cols=125 Identities=31% Similarity=0.432 Sum_probs=119.6
Q ss_pred CceEEeeecCCCCCCCCccccccccCCCCeeEEeeCCCcceeEEEeCCeeEEecCCCCeeEeecccceecccCC----cc
Q 038619 3 LEPLAMNPISQMGKPEKVIRLTPHSDGSTLTILLQVCEVEGLQIKKDGKWTSVSPLRNAFIVNIGDMFEVLTIS----IN 78 (129)
Q Consensus 3 ~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTll~qd~~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~l~~~tng----~~ 78 (129)
.+.||++||||++.++..+|+++|||+|+||||+|| +++||||+.+|+|++|+|.+|++|||+||+||+|||| ++
T Consensus 205 ~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~Qd-~v~GLQV~~~g~Wi~V~p~pgalVVNiGD~L~~~TNG~~kSt~ 283 (361)
T PLN02276 205 DSIMRCNYYPPCQEPELTLGTGPHCDPTSLTILHQD-QVGGLQVFVDNKWRSVRPRPGALVVNIGDTFMALSNGRYKSCL 283 (361)
T ss_pred cceeeeEeCCCCCCcccccCCccccCCceeEEEEec-CCCceEEEECCEEEEcCCCCCeEEEEcHHHHHHHhCCcccccc
Confidence 468999999999988888999999999999999996 6999999999999999999999999999999999999 99
Q ss_pred eeecCCCCCCCceeEeeeeCC--eEEecCCcccCCCCCCCCccccHHHHhhc
Q 038619 79 QWELPSASQERISISTFYKAR--YEEHPASSLISEETPALFRRVTVEEYLRG 128 (129)
Q Consensus 79 HRV~~~~~~~R~S~~~f~~p~--~~i~pl~~~~~~~~~~~y~~~~~~dyl~~ 128 (129)
|||+.+..++|||++||+.|+ ++|+|+++++++++|++|++++++||+++
T Consensus 284 HRVv~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~~~ey~~~ 335 (361)
T PLN02276 284 HRAVVNSERERRSLAFFLCPKEDKVVRPPQELVDREGPRKYPDFTWSDLLEF 335 (361)
T ss_pred ceeecCCCCCEEEEEEEecCCCCCEEeCChHhcCCCCCCcCCCCCHHHHHHH
Confidence 999988889999999999999 99999999999999999999999999864
No 9
>PLN02393 leucoanthocyanidin dioxygenase like protein
Probab=100.00 E-value=2e-42 Score=280.57 Aligned_cols=125 Identities=34% Similarity=0.624 Sum_probs=119.2
Q ss_pred ceEEeeecCCCCCCCCccccccccCCCCeeEEeeCCCcceeEEEeCCeeEEecCCCCeeEeecccceecccCC----cce
Q 038619 4 EPLAMNPISQMGKPEKVIRLTPHSDGSTLTILLQVCEVEGLQIKKDGKWTSVSPLRNAFIVNIGDMFEVLTIS----INQ 79 (129)
Q Consensus 4 ~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTll~qd~~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~l~~~tng----~~H 79 (129)
+.||++|||+++.++..+|+++|||+|+||||+||++++||||+++|+|++|+|.+|++|||+||+||+|||| ++|
T Consensus 213 ~~lRl~~YP~~p~~~~~~g~~~HtD~g~lTlL~q~~~v~GLQV~~~g~W~~V~p~pgalVVNiGD~l~~~Tng~~kSt~H 292 (362)
T PLN02393 213 ACLRVNYYPKCPQPDLTLGLSPHSDPGGMTILLPDDNVAGLQVRRDDAWITVKPVPDAFIVNIGDQIQVLSNAIYKSVEH 292 (362)
T ss_pred ceeeeeecCCCCCcccccccccccCCceEEEEeeCCCCCcceeeECCEEEECCCCCCeEEEEcchhhHhhcCCeeeccce
Confidence 6899999999998888899999999999999999656899999999999999999999999999999999999 999
Q ss_pred eecCCCCCCCceeEeeeeCC--eEEecCCcccCCCCCCCCccccHHHHhhc
Q 038619 80 WELPSASQERISISTFYKAR--YEEHPASSLISEETPALFRRVTVEEYLRG 128 (129)
Q Consensus 80 RV~~~~~~~R~S~~~f~~p~--~~i~pl~~~~~~~~~~~y~~~~~~dyl~~ 128 (129)
||+.+..++|||++||+.|+ ++|+|+++++++++|++|++++++||+++
T Consensus 293 RVv~~~~~~R~SiafF~~P~~d~~i~pl~~~v~~~~p~~y~~~~~~ey~~~ 343 (362)
T PLN02393 293 RVIVNSAKERVSLAFFYNPKSDLPIEPLKELVTPDRPALYPPMTFDEYRLF 343 (362)
T ss_pred ecccCCCCCEEEEEEEecCCCCceEeCcHHhcCCCCCCCCCCccHHHHHHH
Confidence 99998888999999999999 99999999999999999999999999864
No 10
>PLN02704 flavonol synthase
Probab=100.00 E-value=1.2e-42 Score=279.31 Aligned_cols=124 Identities=27% Similarity=0.486 Sum_probs=118.5
Q ss_pred ceEEeeecCCCCCCCCccccccccCCCCeeEEeeCCCcceeEEEeCCeeEEecCCCCeeEeecccceecccCC----cce
Q 038619 4 EPLAMNPISQMGKPEKVIRLTPHSDGSTLTILLQVCEVEGLQIKKDGKWTSVSPLRNAFIVNIGDMFEVLTIS----INQ 79 (129)
Q Consensus 4 ~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTll~qd~~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~l~~~tng----~~H 79 (129)
+.||++||||++.++..+|+++|||+|+||||+|| +++||||+++|+|++|+|.+|++|||+||+||+|||| ++|
T Consensus 199 ~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd-~v~GLQV~~~g~Wi~V~p~pg~lvVNvGD~L~~~TNg~~kSt~H 277 (335)
T PLN02704 199 YLLKINYYPPCPRPDLALGVVAHTDMSAITILVPN-EVQGLQVFRDDHWFDVKYIPNALVIHIGDQIEILSNGKYKSVLH 277 (335)
T ss_pred hhhhhhcCCCCCCcccccCccCccCCcceEEEecC-CCCceeEeECCEEEeCCCCCCeEEEEechHHHHHhCCeeecccc
Confidence 47999999999988889999999999999999996 5999999999999999999999999999999999999 999
Q ss_pred eecCCCCCCCceeEeeeeCC--eEEecCCcccCCCCCCCCccccHHHHhhc
Q 038619 80 WELPSASQERISISTFYKAR--YEEHPASSLISEETPALFRRVTVEEYLRG 128 (129)
Q Consensus 80 RV~~~~~~~R~S~~~f~~p~--~~i~pl~~~~~~~~~~~y~~~~~~dyl~~ 128 (129)
||+.++.++|||++||+.|+ ++|+|+++++++++|++|++++++||+..
T Consensus 278 RVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~p~~Y~~~~~~e~~~~ 328 (335)
T PLN02704 278 RTTVNKEKTRMSWPVFLEPPSELAVGPLPKLINEDNPPKFKTKKFKDYVYC 328 (335)
T ss_pred eeecCCCCCeEEEEEEecCCCCceEeCChHhcCCCCCccCCCCCHHHHHHH
Confidence 99988888999999999999 99999999999999999999999999864
No 11
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.9e-42 Score=279.43 Aligned_cols=125 Identities=40% Similarity=0.626 Sum_probs=117.7
Q ss_pred CceEEeeecCCCCCCCCccccccccCCCCeeEEeeCCCcceeEEEeCCeeEEecCCCCeeEeecccceecccCC----cc
Q 038619 3 LEPLAMNPISQMGKPEKVIRLTPHSDGSTLTILLQVCEVEGLQIKKDGKWTSVSPLRNAFIVNIGDMFEVLTIS----IN 78 (129)
Q Consensus 3 ~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTll~qd~~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~l~~~tng----~~ 78 (129)
.+.||++||||++.++..+|+++|||+|+||||+|| +++||||+++|+|++|+|.+|++|||+||+||+|||| ++
T Consensus 196 ~~~lrl~~YPp~~~~~~~~G~~~HtD~g~lTlL~Qd-~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~L~~~TNG~~kSt~ 274 (348)
T PLN02912 196 GQHMAINYYPPCPQPELTYGLPGHKDANLITVLLQD-EVSGLQVFKDGKWIAVNPIPNTFIVNLGDQMQVISNDKYKSVL 274 (348)
T ss_pred cceeeeeecCCCCChhhcCCcCCCcCCCceEEEEEC-CCCceEEEECCcEEECCCcCCeEEEEcCHHHHHHhCCEEEccc
Confidence 468999999999988789999999999999999996 6899999999999999999999999999999999999 99
Q ss_pred eeecCCCCCCCceeEeeeeCC--eEEecCCcccCCC--CCCCCccccHHHHhhc
Q 038619 79 QWELPSASQERISISTFYKAR--YEEHPASSLISEE--TPALFRRVTVEEYLRG 128 (129)
Q Consensus 79 HRV~~~~~~~R~S~~~f~~p~--~~i~pl~~~~~~~--~~~~y~~~~~~dyl~~ 128 (129)
|||+.++.++|||++||+.|+ ++|+|++++++++ +|++|++++++||++.
T Consensus 275 HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~~v~~~~~~p~~y~~~~~~ey~~~ 328 (348)
T PLN02912 275 HRAVVNTDKERISIPTFYCPSEDAVIGPAQELINEEEDSLAIYRNFTYAEYFEK 328 (348)
T ss_pred ccccCCCCCCEEEEEEEecCCCCCeEeCCHHHhCcCCCCCCCCCCCcHHHHHHH
Confidence 999988888999999999999 9999999999875 4899999999999864
No 12
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase
Probab=100.00 E-value=2.2e-42 Score=276.49 Aligned_cols=125 Identities=30% Similarity=0.545 Sum_probs=117.1
Q ss_pred ceEEeeecCCCCCCCCccccccccCCCCeeEEeeCCCcceeEEEeCCeeEEecCCCCeeEeecccceecccCC----cce
Q 038619 4 EPLAMNPISQMGKPEKVIRLTPHSDGSTLTILLQVCEVEGLQIKKDGKWTSVSPLRNAFIVNIGDMFEVLTIS----INQ 79 (129)
Q Consensus 4 ~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTll~qd~~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~l~~~tng----~~H 79 (129)
..||++||||++.++..+|+++|||+|+||||+||++++||||+++|+|++|+|.+|++|||+||+||+|||| ++|
T Consensus 158 ~~lRl~~YPp~~~~~~~~G~~~HTD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pg~lvVNiGD~l~~~Tng~~kS~~H 237 (321)
T PLN02299 158 FGTKVSNYPPCPKPDLVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITNGKYKSVMH 237 (321)
T ss_pred ceeeeEecCCCCCcccccCccCccCCCeEEEEEecCCCCCcCcccCCeEEECCCCCCeEEEEeCHHHHHHhCCceecccc
Confidence 4799999999998877899999999999999999645899999999999999999999999999999999999 999
Q ss_pred eecCCCCCCCceeEeeeeCC--eEEecCCcccCCC--CCCCCccccHHHHhhc
Q 038619 80 WELPSASQERISISTFYKAR--YEEHPASSLISEE--TPALFRRVTVEEYLRG 128 (129)
Q Consensus 80 RV~~~~~~~R~S~~~f~~p~--~~i~pl~~~~~~~--~~~~y~~~~~~dyl~~ 128 (129)
||+.+.+++|||++||+.|+ ++|+|++++++++ +|++|++++++||++.
T Consensus 238 RVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~v~~~~~~p~~y~p~~~~e~l~~ 290 (321)
T PLN02299 238 RVVAQTDGNRMSIASFYNPGSDAVIYPAPALVEKEAEEEQVYPKFVFEDYMKL 290 (321)
T ss_pred eeecCCCCCEEEEEEEecCCCCceEeCchHhcCcccCCCcCCCCCcHHHHHHH
Confidence 99988888999999999999 9999999999875 5899999999999965
No 13
>PLN02365 2-oxoglutarate-dependent dioxygenase
Probab=100.00 E-value=3.4e-42 Score=273.03 Aligned_cols=125 Identities=23% Similarity=0.377 Sum_probs=117.4
Q ss_pred ceEEeeecCCCCCCCCccccccccCCCCeeEEeeCCCcceeEEEe--CCeeEEecCCCCeeEeecccceecccCC----c
Q 038619 4 EPLAMNPISQMGKPEKVIRLTPHSDGSTLTILLQVCEVEGLQIKK--DGKWTSVSPLRNAFIVNIGDMFEVLTIS----I 77 (129)
Q Consensus 4 ~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTll~qd~~~~GLqv~~--~g~W~~v~~~~~~~vvn~Gd~l~~~tng----~ 77 (129)
+.||++||||++.++..+|+++|||+|+||||+||++++||||++ +|+|++|+|.+|++|||+||+||+|||| +
T Consensus 149 ~~lr~~~YP~~p~~~~~~g~~~HtD~g~lTlL~qd~~~~GLqV~~~~~g~Wi~V~p~pga~vVNiGD~l~~~TNG~~~St 228 (300)
T PLN02365 149 SQFRINKYNFTPETVGSSGVQIHTDSGFLTILQDDENVGGLEVMDPSSGEFVPVDPLPGTLLVNLGDVATAWSNGRLCNV 228 (300)
T ss_pred cceeeeecCCCCCccccccccCccCCCceEEEecCCCcCceEEEECCCCeEEecCCCCCeEEEEhhHHHHHHhCCceecc
Confidence 579999999998888889999999999999999964489999986 6899999999999999999999999999 9
Q ss_pred ceeecCCCCCCCceeEeeeeCC--eEEecCCcccCCCCCCCCccccHHHHhhc
Q 038619 78 NQWELPSASQERISISTFYKAR--YEEHPASSLISEETPALFRRVTVEEYLRG 128 (129)
Q Consensus 78 ~HRV~~~~~~~R~S~~~f~~p~--~~i~pl~~~~~~~~~~~y~~~~~~dyl~~ 128 (129)
+|||+.++.++|||++||+.|+ ++|+|+++++++++|++|++++++||++.
T Consensus 229 ~HRVv~~~~~~R~Si~~F~~p~~d~~i~p~~~~v~~~~p~~y~~~~~~e~~~~ 281 (300)
T PLN02365 229 KHRVQCKEATMRISIASFLLGPKDDDVEAPPEFVDAEHPRLYKPFTYEDYRKL 281 (300)
T ss_pred cceeEcCCCCCEEEEEEEecCCCCCeEeCCHHHcCCCCCccCCCccHHHHHHH
Confidence 9999988888999999999999 99999999999999999999999999874
No 14
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=100.00 E-value=6.5e-42 Score=274.06 Aligned_cols=126 Identities=37% Similarity=0.555 Sum_probs=119.7
Q ss_pred CceEEeeecCCCCCCCCccccccccCCCCeeEEeeCCCcceeEEE-eCCeeEEecCCCCeeEeecccceecccCC----c
Q 038619 3 LEPLAMNPISQMGKPEKVIRLTPHSDGSTLTILLQVCEVEGLQIK-KDGKWTSVSPLRNAFIVNIGDMFEVLTIS----I 77 (129)
Q Consensus 3 ~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTll~qd~~~~GLqv~-~~g~W~~v~~~~~~~vvn~Gd~l~~~tng----~ 77 (129)
.+.||+||||||++++.++|+++|||.++||+|+||++++||||. ++|+|++|+|.|+++|||+||+||+|||| +
T Consensus 175 ~~~~r~n~Yp~cp~pe~~lGl~~HtD~~~lTiLlqd~~V~GLQv~~~dg~Wi~V~P~p~a~vVNiGD~l~~lSNG~ykSv 254 (322)
T KOG0143|consen 175 GQVMRLNYYPPCPEPELTLGLGAHTDKSFLTILLQDDDVGGLQVFTKDGKWIDVPPIPGAFVVNIGDMLQILSNGRYKSV 254 (322)
T ss_pred ceEEEEeecCCCcCccccccccCccCcCceEEEEccCCcCceEEEecCCeEEECCCCCCCEEEEcccHHhHhhCCcccce
Confidence 458999999999999999999999999999999997679999999 59999999999999999999999999999 9
Q ss_pred ceeecCCCCCCCceeEeeeeCC--eEEecCCcccCCCCCCCCccccHHHHhhcC
Q 038619 78 NQWELPSASQERISISTFYKAR--YEEHPASSLISEETPALFRRVTVEEYLRGR 129 (129)
Q Consensus 78 ~HRV~~~~~~~R~S~~~f~~p~--~~i~pl~~~~~~~~~~~y~~~~~~dyl~~~ 129 (129)
.|||+.+++++|+|+|+|+.|. .+|.|++++++++ |++|+++++.+|++++
T Consensus 255 ~HRV~~n~~~~R~Sia~F~~p~~d~~i~p~~elv~~~-~~~Y~~~~~~~y~~~~ 307 (322)
T KOG0143|consen 255 LHRVVVNGEKERISVAFFVFPPLDKVIGPPEELVDEE-PPKYKPFTFGDYLEFY 307 (322)
T ss_pred EEEEEeCCCCceEEEEEEecCCCCceecChhhhCCCC-CCccCcEEHHHHHHHH
Confidence 9999999988899999999999 8999999999887 8889999999999753
No 15
>PLN02904 oxidoreductase
Probab=100.00 E-value=6.1e-42 Score=277.36 Aligned_cols=124 Identities=29% Similarity=0.476 Sum_probs=117.3
Q ss_pred CceEEeeecCCCCCCCCccccccccCCCCeeEEeeCCCcceeEEEe-CCeeEEecCCCCeeEeecccceecccCC----c
Q 038619 3 LEPLAMNPISQMGKPEKVIRLTPHSDGSTLTILLQVCEVEGLQIKK-DGKWTSVSPLRNAFIVNIGDMFEVLTIS----I 77 (129)
Q Consensus 3 ~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTll~qd~~~~GLqv~~-~g~W~~v~~~~~~~vvn~Gd~l~~~tng----~ 77 (129)
.+.||++|||||+.++..+|+++|||+|+||||+|| .+||||++ +|+|++|+|.||++|||+||+||+|||| +
T Consensus 207 ~~~lrl~~YPp~p~~~~~~g~~~HtD~g~lTlL~qd--~~GLQV~~~~g~Wi~V~p~pgalVVNiGD~Le~~TNG~~kSt 284 (357)
T PLN02904 207 SQVMAVNCYPACPEPEIALGMPPHSDFGSLTILLQS--SQGLQIMDCNKNWVCVPYIEGALIVQLGDQVEVMSNGIYKSV 284 (357)
T ss_pred ccEEEeeecCCCCCcccccCCcCccCCCceEEEecC--CCeeeEEeCCCCEEECCCCCCeEEEEccHHHHHHhCCeeecc
Confidence 357999999999988889999999999999999995 48999997 7999999999999999999999999999 9
Q ss_pred ceeecCCCCCCCceeEeeeeCC--eEEecCCcccCCCCCCCCccccHHHHhhc
Q 038619 78 NQWELPSASQERISISTFYKAR--YEEHPASSLISEETPALFRRVTVEEYLRG 128 (129)
Q Consensus 78 ~HRV~~~~~~~R~S~~~f~~p~--~~i~pl~~~~~~~~~~~y~~~~~~dyl~~ 128 (129)
+|||+.+++++|||++||+.|+ +.|+|+++++++++|++|++++++||++.
T Consensus 285 ~HRVv~~~~~~R~Si~~F~~p~~d~~i~Pl~~~v~~~~p~~Y~~~~~~ey~~~ 337 (357)
T PLN02904 285 VHRVTVNKDYKRLSFASLHSLPLHKKISPAPELVNENKPAAYGEFSFNDFLDY 337 (357)
T ss_pred CCcccCCCCCCEEEEEEeecCCCCCeEeCCHHHcCCCCCCcCCCCCHHHHHHH
Confidence 9999998888999999999999 99999999999999999999999999864
No 16
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=8.5e-42 Score=275.19 Aligned_cols=125 Identities=30% Similarity=0.547 Sum_probs=118.0
Q ss_pred CceEEeeecCCCCCCCCccccccccCCCCeeEEeeCCCcceeEEEe--CCeeEEecCCCCeeEeecccceecccCC----
Q 038619 3 LEPLAMNPISQMGKPEKVIRLTPHSDGSTLTILLQVCEVEGLQIKK--DGKWTSVSPLRNAFIVNIGDMFEVLTIS---- 76 (129)
Q Consensus 3 ~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTll~qd~~~~GLqv~~--~g~W~~v~~~~~~~vvn~Gd~l~~~tng---- 76 (129)
.+.||++||||++.++..+|+++|||+|+||||+|| +++||||+. +|+|++|+|.+|++|||+||+||+||||
T Consensus 192 ~~~lR~~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd-~v~GLQV~~~~~g~Wi~V~p~pg~~vVNiGD~L~~~Tng~~~S 270 (345)
T PLN02750 192 ISFARFNHYPPCPAPHLALGVGRHKDGGALTVLAQD-DVGGLQISRRSDGEWIPVKPIPDAFIINIGNCMQVWTNDLYWS 270 (345)
T ss_pred ceEEEEEecCCCCCcccccCcCCCCCCCeEEEEecC-CCCceEEeecCCCeEEEccCCCCeEEEEhHHHHHHHhCCeeec
Confidence 468999999999887788999999999999999996 589999974 8999999999999999999999999999
Q ss_pred cceeecCCCCCCCceeEeeeeCC--eEEecCCcccCCCCCCCCccccHHHHhhc
Q 038619 77 INQWELPSASQERISISTFYKAR--YEEHPASSLISEETPALFRRVTVEEYLRG 128 (129)
Q Consensus 77 ~~HRV~~~~~~~R~S~~~f~~p~--~~i~pl~~~~~~~~~~~y~~~~~~dyl~~ 128 (129)
++|||+.+..++|||++||+.|+ ++|+|+++++++++|++|++++++||+..
T Consensus 271 t~HRVv~~~~~~R~Si~~F~~P~~d~~i~pl~~~v~~~~p~~y~p~~~~e~~~~ 324 (345)
T PLN02750 271 AEHRVVVNSQKERFSIPFFFFPSHYVNIKPLDELINEQNPPKYKEFNWGKFFAS 324 (345)
T ss_pred ccceeccCCCCCEEEEEEeecCCCCCeecCcHHhcCCCCCCccCCccHHHHHHH
Confidence 99999988888999999999999 99999999999999999999999999864
No 17
>PLN02156 gibberellin 2-beta-dioxygenase
Probab=100.00 E-value=1.2e-41 Score=273.73 Aligned_cols=125 Identities=26% Similarity=0.426 Sum_probs=116.4
Q ss_pred CceEEeeecCCCCCC--CCccccccccCCCCeeEEeeCCCcceeEEE-eCCeeEEecCCCCeeEeecccceecccCC---
Q 038619 3 LEPLAMNPISQMGKP--EKVIRLTPHSDGSTLTILLQVCEVEGLQIK-KDGKWTSVSPLRNAFIVNIGDMFEVLTIS--- 76 (129)
Q Consensus 3 ~~~lrl~~Ypp~~~~--~~~~g~~~HtD~~~lTll~qd~~~~GLqv~-~~g~W~~v~~~~~~~vvn~Gd~l~~~tng--- 76 (129)
.+.||++||||++.. +..+|+++|||+|+||||+|| +++||||+ ++|+|++|+|.+|++|||+||+||+||||
T Consensus 177 ~~~lRl~~YP~~~~~~~~~~~g~~~HTD~g~lTlL~Qd-~v~GLQV~~~~g~Wi~Vpp~pga~VVNiGD~l~~wTNg~~k 255 (335)
T PLN02156 177 DSCLRMNHYPEKEETPEKVEIGFGEHTDPQLISLLRSN-DTAGLQICVKDGTWVDVPPDHSSFFVLVGDTLQVMTNGRFK 255 (335)
T ss_pred cceEeEEeCCCCCCCccccccCCCCccCCCceEEEEeC-CCCceEEEeCCCCEEEccCCCCcEEEEhHHHHHHHhCCeee
Confidence 368999999999752 357999999999999999996 68999998 58999999999999999999999999999
Q ss_pred -cceeecCCCCCCCceeEeeeeCC--eEEecCCcccCCCCCCCCccccHHHHhhc
Q 038619 77 -INQWELPSASQERISISTFYKAR--YEEHPASSLISEETPALFRRVTVEEYLRG 128 (129)
Q Consensus 77 -~~HRV~~~~~~~R~S~~~f~~p~--~~i~pl~~~~~~~~~~~y~~~~~~dyl~~ 128 (129)
+.|||+.+.+++|||++||+.|+ ++|+|+++++++++|++|++++++||+..
T Consensus 256 St~HRVv~~~~~~R~SiafF~~P~~d~~i~pl~~~v~~~~p~~y~p~~~~ey~~~ 310 (335)
T PLN02156 256 SVKHRVVTNTKRSRISMIYFAGPPLSEKIAPLSCLVPKQDDCLYNEFTWSQYKLS 310 (335)
T ss_pred ccceeeecCCCCCEEEEEEeecCCCCCEEeCChHhcCCCCCccCCCccHHHHHHH
Confidence 99999988888999999999999 99999999999999999999999999864
No 18
>PLN03178 leucoanthocyanidin dioxygenase; Provisional
Probab=100.00 E-value=6.4e-42 Score=277.32 Aligned_cols=125 Identities=28% Similarity=0.443 Sum_probs=117.2
Q ss_pred CceEEeeecCCCCCCCCccccccccCCCCeeEEeeCCCcceeEEEeCCeeEEecCCCCeeEeecccceecccCC----cc
Q 038619 3 LEPLAMNPISQMGKPEKVIRLTPHSDGSTLTILLQVCEVEGLQIKKDGKWTSVSPLRNAFIVNIGDMFEVLTIS----IN 78 (129)
Q Consensus 3 ~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTll~qd~~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~l~~~tng----~~ 78 (129)
.+.||++|||+++.++..+|+++|||+|+||||+|| +++||||+++|+|++|+|.+|++|||+||+||+|||| ++
T Consensus 210 ~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~qd-~v~GLQV~~~g~Wi~V~p~pg~lvVNiGD~L~~~TNG~~kSt~ 288 (360)
T PLN03178 210 LLQMKINYYPRCPQPDLALGVEAHTDVSALTFILHN-MVPGLQVLYEGKWVTAKCVPDSIVVHIGDTLEILSNGRYKSIL 288 (360)
T ss_pred hhhhheeccCCCCCCccccCcCCccCCCceEEEeeC-CCCceeEeECCEEEEcCCCCCeEEEEccHHHHHHhCCcccccc
Confidence 357999999999988889999999999999999996 6999999999999999999999999999999999999 99
Q ss_pred eeecCCCCCCCceeEeeeeCC--e-EEecCCcccCCCCCCCCccccHHHHhhc
Q 038619 79 QWELPSASQERISISTFYKAR--Y-EEHPASSLISEETPALFRRVTVEEYLRG 128 (129)
Q Consensus 79 HRV~~~~~~~R~S~~~f~~p~--~-~i~pl~~~~~~~~~~~y~~~~~~dyl~~ 128 (129)
|||+.+++.+|||++||+.|+ + +++|+++++++++|++|++++++||++.
T Consensus 289 HRVv~~~~~~R~Si~~F~~P~~d~~v~~pl~~~v~~~~p~~y~p~~~~eyl~~ 341 (360)
T PLN03178 289 HRGLVNKEKVRISWAVFCEPPKEKIILKPLPELVSKEEPPKFPPRTFGQHVSH 341 (360)
T ss_pred ceeecCCCCCeEEEEEEecCCcccccccCcHHHcCCCCcccCCCccHHHHHHH
Confidence 999988888899999999999 4 4599999999999999999999999864
No 19
>PLN02485 oxidoreductase
Probab=100.00 E-value=2.7e-41 Score=270.48 Aligned_cols=126 Identities=22% Similarity=0.388 Sum_probs=116.0
Q ss_pred CceEEeeecCCCCC----CCCccccccccCCCCeeEEeeCCCcceeEEEe-CCeeEEecCCCCeeEeecccceecccCC-
Q 038619 3 LEPLAMNPISQMGK----PEKVIRLTPHSDGSTLTILLQVCEVEGLQIKK-DGKWTSVSPLRNAFIVNIGDMFEVLTIS- 76 (129)
Q Consensus 3 ~~~lrl~~Ypp~~~----~~~~~g~~~HtD~~~lTll~qd~~~~GLqv~~-~g~W~~v~~~~~~~vvn~Gd~l~~~tng- 76 (129)
.+.||++||||++. ++..+|+++|||+|+||||+||++++||||+. +|+|++|+|.+|++|||+||+||+||||
T Consensus 183 ~~~lrl~~YP~~~~~~~~~~~~~g~~~HTD~g~lTlL~qd~~~~GLqV~~~~g~Wi~V~p~pg~~vVNiGD~L~~~TnG~ 262 (329)
T PLN02485 183 FWVMRIIGYPGVSNLNGPPENDIGCGAHTDYGLLTLVNQDDDITALQVRNLSGEWIWAIPIPGTFVCNIGDMLKIWSNGV 262 (329)
T ss_pred cceEEEEeCCCCccccCCcccCcccccccCCCeEEEEeccCCCCeeeEEcCCCcEEECCCCCCcEEEEhHHHHHHHHCCE
Confidence 35799999999975 45679999999999999999975689999984 8999999999999999999999999999
Q ss_pred ---cceeecCCCCCCCceeEeeeeCC--eEEecCCcccC--CCCCCCCccccHHHHhhc
Q 038619 77 ---INQWELPSASQERISISTFYKAR--YEEHPASSLIS--EETPALFRRVTVEEYLRG 128 (129)
Q Consensus 77 ---~~HRV~~~~~~~R~S~~~f~~p~--~~i~pl~~~~~--~~~~~~y~~~~~~dyl~~ 128 (129)
++|||+.+++++|||++||++|+ ++|+|++++++ +++|++|++++++||+..
T Consensus 263 ~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~~~y~~~t~~e~~~~ 321 (329)
T PLN02485 263 YQSTLHRVINNSPKYRVCVAFFYETNFDAAVEPLDICKEKRTGGSQVFKRVVYGEHLVN 321 (329)
T ss_pred eeCCCceecCCCCCCeEEEEEEecCCCCceeecchhhcccccCCCCCCCcEeHHHHHHH
Confidence 99999988888999999999999 99999999987 667899999999999874
No 20
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=4.8e-41 Score=271.33 Aligned_cols=122 Identities=34% Similarity=0.553 Sum_probs=114.5
Q ss_pred ceEEeeecCCCCCCCCccccccccCCCCeeEEeeCCCcceeEEEeCCeeEEecCCCCeeEeecccceecccCC----cce
Q 038619 4 EPLAMNPISQMGKPEKVIRLTPHSDGSTLTILLQVCEVEGLQIKKDGKWTSVSPLRNAFIVNIGDMFEVLTIS----INQ 79 (129)
Q Consensus 4 ~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTll~qd~~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~l~~~tng----~~H 79 (129)
+.||++||||++.++..+|+++|||+|+||||+||++++||||+++|+|++|+|.+|++|||+||+||+|||| ++|
T Consensus 203 ~~lRl~~YPp~~~~~~~~g~~~HTD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pg~lVVNiGD~Le~~Tng~~kSt~H 282 (348)
T PLN00417 203 MDTRFNMYPPCPRPDKVIGVKPHADGSAFTLLLPDKDVEGLQFLKDGKWYKAPIVPDTILINVGDQMEIMSNGIYKSPVH 282 (348)
T ss_pred ceeeeeecCCCCCcccccCCcCccCCCceEEEEecCCCCceeEeECCeEEECCCCCCcEEEEcChHHHHHhCCeecccce
Confidence 4699999999998888899999999999999999646899999999999999999999999999999999999 999
Q ss_pred eecCCCCCCCceeEeeeeCC--eEEecCCcccCCCCCCCCccccHHHH
Q 038619 80 WELPSASQERISISTFYKAR--YEEHPASSLISEETPALFRRVTVEEY 125 (129)
Q Consensus 80 RV~~~~~~~R~S~~~f~~p~--~~i~pl~~~~~~~~~~~y~~~~~~dy 125 (129)
||+.+..++|||++||+.|+ ++|+|+++++++++|++|++++..++
T Consensus 283 RVv~~~~~~R~Si~fF~~P~~d~~i~pl~~~v~~~~p~~Y~~~~~~~~ 330 (348)
T PLN00417 283 RVVTNREKERISVATFCIPGADKEIQPVDGLVSEARPRLYKTVKKYVE 330 (348)
T ss_pred EEecCCCCCEEEEEEEecCCCCceecCchHhcCCCCCCCCCCHHHHHH
Confidence 99988888999999999999 99999999999999999999995543
No 21
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=7.4e-41 Score=268.65 Aligned_cols=124 Identities=30% Similarity=0.409 Sum_probs=114.4
Q ss_pred CceEEeeecCCCCCCC-CccccccccCCCCeeEEeeCCCcceeEEEeC-----CeeEEecCCCCeeEeecccceecccCC
Q 038619 3 LEPLAMNPISQMGKPE-KVIRLTPHSDGSTLTILLQVCEVEGLQIKKD-----GKWTSVSPLRNAFIVNIGDMFEVLTIS 76 (129)
Q Consensus 3 ~~~lrl~~Ypp~~~~~-~~~g~~~HtD~~~lTll~qd~~~~GLqv~~~-----g~W~~v~~~~~~~vvn~Gd~l~~~tng 76 (129)
.+.||++||||++.++ ..+|+++|||+|+||||+|| +++||||+++ |+|++|+|.||++|||+||+||+||||
T Consensus 181 ~~~lrl~~YP~~~~~~~~~~g~~~HTD~g~lTlL~qd-~v~GLQV~~~~~~~~g~Wi~Vpp~pg~~VVNiGD~L~~wTng 259 (332)
T PLN03002 181 IATMRLLRYQGISDPSKGIYACGAHSDFGMMTLLATD-GVMGLQICKDKNAMPQKWEYVPPIKGAFIVNLGDMLERWSNG 259 (332)
T ss_pred chheeeeeCCCCCCcccCccccccccCCCeEEEEeeC-CCCceEEecCCCCCCCcEEECCCCCCeEEEEHHHHHHHHhCC
Confidence 3679999999998654 47999999999999999996 6999999863 689999999999999999999999999
Q ss_pred ----cceeecCCCCCCCceeEeeeeCC--eEEecCCcccCCCCCCCCccccHHHHhhc
Q 038619 77 ----INQWELPSASQERISISTFYKAR--YEEHPASSLISEETPALFRRVTVEEYLRG 128 (129)
Q Consensus 77 ----~~HRV~~~~~~~R~S~~~f~~p~--~~i~pl~~~~~~~~~~~y~~~~~~dyl~~ 128 (129)
++|||+.+. .+|||++||+.|+ ++|+|+++++++++|++|++++++||++.
T Consensus 260 ~~kSt~HRVv~~~-~~R~Sia~F~~p~~d~~i~pl~~~~~~~~p~~y~~~~~~e~l~~ 316 (332)
T PLN03002 260 FFKSTLHRVLGNG-QERYSIPFFVEPNHDCLVECLPTCKSESDLPKYPPIKCSTYLTQ 316 (332)
T ss_pred eeECcCCeecCCC-CCeeEEEEEecCCCCeeEecCCcccCCCCcccCCCccHHHHHHH
Confidence 999999775 5799999999999 99999999999999999999999999975
No 22
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase
Probab=100.00 E-value=1.1e-40 Score=270.24 Aligned_cols=124 Identities=31% Similarity=0.483 Sum_probs=114.1
Q ss_pred CceEEeeecCCCCCCCCccccccccCCCCeeEEeeCCCcceeEEEeCC--eeEEecCCCCeeEeecccceecccCC----
Q 038619 3 LEPLAMNPISQMGKPEKVIRLTPHSDGSTLTILLQVCEVEGLQIKKDG--KWTSVSPLRNAFIVNIGDMFEVLTIS---- 76 (129)
Q Consensus 3 ~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTll~qd~~~~GLqv~~~g--~W~~v~~~~~~~vvn~Gd~l~~~tng---- 76 (129)
.+.+|++|||+++.++..+|+++|||+|+||||+|| +++||||++++ +|++|+|.||++|||+||+||+||||
T Consensus 194 ~~~lrl~~YP~~~~~~~~~G~~~HTD~g~lTlL~Qd-~v~GLQV~~~~~~~Wi~Vpp~pgalVVNiGD~L~~~TNG~~kS 272 (358)
T PLN02515 194 DQKVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQD-QVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKN 272 (358)
T ss_pred cceEEEeecCCCCChhhccCCCCCCCCCeEEEEecC-CCCceEEEECCCCeEEECCCCCCeEEEEccHHHHHHhCCeeee
Confidence 357999999999888889999999999999999996 68999998743 79999999999999999999999999
Q ss_pred cceeecCCCCCCCceeEeeeeCC--eEEecCCcccCCCCCCCCccccHHHHhhc
Q 038619 77 INQWELPSASQERISISTFYKAR--YEEHPASSLISEETPALFRRVTVEEYLRG 128 (129)
Q Consensus 77 ~~HRV~~~~~~~R~S~~~f~~p~--~~i~pl~~~~~~~~~~~y~~~~~~dyl~~ 128 (129)
++|||+.+..++|||++||+.|+ ++|+|++ ++++++|++|++++++||++.
T Consensus 273 t~HRVv~~~~~~R~Si~~F~~P~~d~~i~Pl~-~~~~~~p~~y~~~t~~eyl~~ 325 (358)
T PLN02515 273 ADHQAVVNSNCSRLSIATFQNPAPDATVYPLK-VREGEKPILEEPITFAEMYRR 325 (358)
T ss_pred ecceEECCCCCCEEEEEEEecCCCCCEEECCC-cCCCCCCCcCCCcCHHHHHHH
Confidence 99999988888999999999999 9999997 556678999999999999864
No 23
>PTZ00273 oxidase reductase; Provisional
Probab=100.00 E-value=2.1e-40 Score=264.40 Aligned_cols=124 Identities=27% Similarity=0.426 Sum_probs=115.0
Q ss_pred CceEEeeecCCCCC-CCCccccccccCCCCeeEEeeCCCcceeEEEe-CCeeEEecCCCCeeEeecccceecccCC----
Q 038619 3 LEPLAMNPISQMGK-PEKVIRLTPHSDGSTLTILLQVCEVEGLQIKK-DGKWTSVSPLRNAFIVNIGDMFEVLTIS---- 76 (129)
Q Consensus 3 ~~~lrl~~Ypp~~~-~~~~~g~~~HtD~~~lTll~qd~~~~GLqv~~-~g~W~~v~~~~~~~vvn~Gd~l~~~tng---- 76 (129)
.+.||++||||++. ++..+|+++|||+|+||||+|| .++||||+. +|+|++|+|.+|++|||+||+||+||||
T Consensus 176 ~~~lrl~~YP~~~~~~~~~~g~~~HTD~g~lTlL~qd-~~~GLqV~~~~g~Wi~V~p~pg~lvVNvGD~l~~~TnG~~kS 254 (320)
T PTZ00273 176 LSVFRMKHYPALPQTKKGRTVCGEHTDYGIITLLYQD-SVGGLQVRNLSGEWMDVPPLEGSFVVNIGDMMEMWSNGRYRS 254 (320)
T ss_pred cceeeeeecCCCCCccccCcccccccCCCeEEEEecC-CCCceEEECCCCCEEeCCCCCCeEEEEHHHHHHHHHCCeeeC
Confidence 46799999999986 3567899999999999999996 589999985 8999999999999999999999999999
Q ss_pred cceeecCCCCCCCceeEeeeeCC--eEEecCCcccCCCCCCCCccccHHHHhhc
Q 038619 77 INQWELPSASQERISISTFYKAR--YEEHPASSLISEETPALFRRVTVEEYLRG 128 (129)
Q Consensus 77 ~~HRV~~~~~~~R~S~~~f~~p~--~~i~pl~~~~~~~~~~~y~~~~~~dyl~~ 128 (129)
++|||+.+ ..+|||++||+.|+ ++|+|+++++++++|++|++++++||++.
T Consensus 255 t~HRVv~~-~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~y~~~~~~e~~~~ 307 (320)
T PTZ00273 255 TPHRVVNT-GVERYSMPFFCEPNPNVIIKCLDNCHSEENPPKYPPVRAVDWLLK 307 (320)
T ss_pred CCccccCC-CCCeEEEEEEEcCCCCceEecCccccCCCCcccCCceeHHHHHHH
Confidence 99999854 57899999999999 99999999999999999999999999875
No 24
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.6e-38 Score=256.15 Aligned_cols=115 Identities=26% Similarity=0.419 Sum_probs=105.8
Q ss_pred CceEEeeecCCCCCCCCccccccccCCCCeeEEeeCCCcceeEEEeCCeeEEecCCCCeeEeecccceecccCC----cc
Q 038619 3 LEPLAMNPISQMGKPEKVIRLTPHSDGSTLTILLQVCEVEGLQIKKDGKWTSVSPLRNAFIVNIGDMFEVLTIS----IN 78 (129)
Q Consensus 3 ~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTll~qd~~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~l~~~tng----~~ 78 (129)
.+.||++||||++.++..+|+++|||+|+||||+|| +++||||+++|+|++|+|.||++|||+||+||+|||| ++
T Consensus 199 ~~~lRl~~YPp~~~~~~~~g~~aHTD~g~lTlL~Qd-~v~GLQV~~~g~Wv~V~p~pgalVVNiGD~Le~wTNg~~kSt~ 277 (341)
T PLN02984 199 TGVIRVYRYPQCSNEAEAPGMEVHTDSSVISILNQD-EVGGLEVMKDGEWFNVKPIANTLVVNLGDMMQVISDDEYKSVL 277 (341)
T ss_pred cceEEEEeCCCCCCcccccCccCccCCCceEEEEeC-CCCCeeEeeCCceEECCCCCCeEEEECChhhhhhcCCeeeCCC
Confidence 458999999999887778999999999999999996 6999999999999999999999999999999999999 99
Q ss_pred eeec-CCCCCCCceeEeeeeCC--eEEecCCcccCCCCCCCCccccHHHHhhc
Q 038619 79 QWEL-PSASQERISISTFYKAR--YEEHPASSLISEETPALFRRVTVEEYLRG 128 (129)
Q Consensus 79 HRV~-~~~~~~R~S~~~f~~p~--~~i~pl~~~~~~~~~~~y~~~~~~dyl~~ 128 (129)
|||+ .+..+.|||++||+.|+ ++|+ |++|++++++||+++
T Consensus 278 HRVv~~~~~~~R~Sia~F~~P~~d~~i~----------p~~y~p~t~~e~l~~ 320 (341)
T PLN02984 278 HRVGKRNKKKERYSICYFVFPEEDCVIK----------SSKYKPFTYSDFEAQ 320 (341)
T ss_pred CccccCCCCCCeEEEEEEecCCCCCEEc----------cCCcCcccHHHHHHH
Confidence 9996 45568899999999999 7775 469999999999975
No 25
>PLN02403 aminocyclopropanecarboxylate oxidase
Probab=100.00 E-value=1.5e-38 Score=252.79 Aligned_cols=118 Identities=31% Similarity=0.519 Sum_probs=108.0
Q ss_pred ceEEeeecCCCCCCCCccccccccCCCCeeEEeeCCCcceeEEEeCCeeEEecCCC-CeeEeecccceecccCC----cc
Q 038619 4 EPLAMNPISQMGKPEKVIRLTPHSDGSTLTILLQVCEVEGLQIKKDGKWTSVSPLR-NAFIVNIGDMFEVLTIS----IN 78 (129)
Q Consensus 4 ~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTll~qd~~~~GLqv~~~g~W~~v~~~~-~~~vvn~Gd~l~~~tng----~~ 78 (129)
..||++||||+++++..+|+++|||+|+||||+|+++++||||+++|+|++|+|.+ +++|||+||+||+|||| ++
T Consensus 153 ~~lrl~~YP~~~~~~~~~G~~~HtD~g~lTlL~q~~~v~GLqV~~~g~Wi~V~p~p~~~lvVNvGD~L~~~Tng~~~S~~ 232 (303)
T PLN02403 153 VGTKVAKYPECPRPELVRGLREHTDAGGIILLLQDDQVPGLEFLKDGKWVPIPPSKNNTIFVNTGDQLEVLSNGRYKSTL 232 (303)
T ss_pred ceeeeEcCCCCCCcccccCccCccCCCeEEEEEecCCCCceEeccCCeEEECCCCCCCEEEEEehHHHHHHhCCeeeccc
Confidence 36999999999887778899999999999999996458999999999999999999 69999999999999999 99
Q ss_pred eeecCCCCCCCceeEeeeeCC--eEEecCCcccCCCCCCCCc-cccHHHHhhc
Q 038619 79 QWELPSASQERISISTFYKAR--YEEHPASSLISEETPALFR-RVTVEEYLRG 128 (129)
Q Consensus 79 HRV~~~~~~~R~S~~~f~~p~--~~i~pl~~~~~~~~~~~y~-~~~~~dyl~~ 128 (129)
|||+.+.+++|||++||+.|+ ++|+|+++++ |+ +++++||+++
T Consensus 233 HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~~-------~~~~~~~~eyl~~ 278 (303)
T PLN02403 233 HRVMADKNGSRLSIATFYNPAGDAIISPAPKLL-------YPSNYRFQDYLKL 278 (303)
T ss_pred ceeecCCCCCEEEEEEEEcCCCCCeEeCchhhC-------CCCCccHHHHHHH
Confidence 999988888999999999999 9999999875 34 3999999975
No 26
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only]
Probab=100.00 E-value=4.8e-35 Score=231.00 Aligned_cols=117 Identities=25% Similarity=0.295 Sum_probs=106.2
Q ss_pred CceEEeeecCCCCCCCCccccccccCCCCeeEEeeCCCcceeEEEeC-CeeEEecCCCCeeEeecccceecccCC----c
Q 038619 3 LEPLAMNPISQMGKPEKVIRLTPHSDGSTLTILLQVCEVEGLQIKKD-GKWTSVSPLRNAFIVNIGDMFEVLTIS----I 77 (129)
Q Consensus 3 ~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTll~qd~~~~GLqv~~~-g~W~~v~~~~~~~vvn~Gd~l~~~tng----~ 77 (129)
.++|||++||+.+..+..-|.++|+|+|+||||+|| +++||||... |+|++|+|.||++|||+|||||+|||| +
T Consensus 173 ~~~~RLlrYP~~~~~~~~~~~GaHtD~G~lTLl~Qd-~~~GLqv~~~~g~Wl~v~P~pgtlvVNiGdmLe~~Tng~lrST 251 (322)
T COG3491 173 NSVLRLLRYPSRPAREGADGVGAHTDYGLLTLLFQD-DVGGLEVRPPNGGWLDVPPIPGTLVVNIGDMLERWTNGRLRST 251 (322)
T ss_pred hheEEEEecCCCcccccccccccccCCCeEEEEEec-ccCCeEEecCCCCeeECCCCCCeEEEeHHHHHHHHhCCeeccc
Confidence 578999999999988888899999999999999997 6999999985 999999999999999999999999999 9
Q ss_pred ceeecCCCCCCCceeEeeeeCC--eEEecCC-cccCCCCCCCCccc
Q 038619 78 NQWELPSASQERISISTFYKAR--YEEHPAS-SLISEETPALFRRV 120 (129)
Q Consensus 78 ~HRV~~~~~~~R~S~~~f~~p~--~~i~pl~-~~~~~~~~~~y~~~ 120 (129)
+|||+.++..+||||+||+.|+ +.|.|+. ...+.+.++++.+-
T Consensus 252 ~HRV~~~~~~~R~SipfF~~p~~Da~I~Pl~~l~~~~a~~~~~~~t 297 (322)
T COG3491 252 VHRVRNPPGVDRYSIPFFLEPNFDAEIAPLLPLCPEAANEPRGPGT 297 (322)
T ss_pred cceeecCCCccceeeeeeccCCCCccccccCCCCcccccCCcCCCC
Confidence 9999999888999999999999 9999876 44455567777663
No 27
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit. The holoenzyme has the activity (1.14.11.2 from EC) catalysing the reaction: Procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2. The full enzyme consists of a alpha2 beta2 complex with the alpha subunit contributing most of the parts of the active site []. The family also includes lysyl hydrolases, isopenicillin synthases and AlkB. ; GO: 0016491 oxidoreductase activity, 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0055114 oxidation-reduction process; PDB: 3ON7_D 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=99.93 E-value=3.4e-26 Score=153.18 Aligned_cols=91 Identities=40% Similarity=0.684 Sum_probs=74.4
Q ss_pred ceEEeeecCCCCCCCCccccccccCC--CCeeEEeeCCCcceeEEEeCCeeEEecCCCCeeEeecccceecccCC----c
Q 038619 4 EPLAMNPISQMGKPEKVIRLTPHSDG--STLTILLQVCEVEGLQIKKDGKWTSVSPLRNAFIVNIGDMFEVLTIS----I 77 (129)
Q Consensus 4 ~~lrl~~Ypp~~~~~~~~g~~~HtD~--~~lTll~qd~~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~l~~~tng----~ 77 (129)
+.||+++|+| ++...|+++|+|. +++|+++|+ +.+|||+..+++|+.|++.++.++||+||+|++|||| +
T Consensus 2 ~~~~~~~Y~~---~~~~~~~~~H~D~~~~~~Til~~~-~~~gL~~~~~~~~~~v~~~~~~~~v~~G~~l~~~t~g~~~~~ 77 (98)
T PF03171_consen 2 SQLRLNRYPP---PENGVGIGPHTDDEDGLLTILFQD-EVGGLQVRDDGEWVDVPPPPGGFIVNFGDALEILTNGRYPAT 77 (98)
T ss_dssp -EEEEEEE-S---CCGCEEEEEEEES--SSEEEEEET-STS-EEEEETTEEEE----TTCEEEEEBHHHHHHTTTSS---
T ss_pred CEEEEEECCC---cccCCceeCCCcCCCCeEEEEecc-cchheeccccccccCccCccceeeeeceeeeecccCCccCCc
Confidence 5799999999 6678999999999 999999994 6999999999999999999999999999999999999 9
Q ss_pred ceeecCCCCCCCceeEeeeeC
Q 038619 78 NQWELPSASQERISISTFYKA 98 (129)
Q Consensus 78 ~HRV~~~~~~~R~S~~~f~~p 98 (129)
.|||....+..|+|++||++|
T Consensus 78 ~HrV~~~~~~~R~s~~~f~~p 98 (98)
T PF03171_consen 78 LHRVVPPTEGERYSLTFFLRP 98 (98)
T ss_dssp -EEEE--STS-EEEEEEEEE-
T ss_pred eeeeEcCCCCCEEEEEEEECC
Confidence 999999988999999999987
No 28
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A ....
Probab=97.37 E-value=0.00019 Score=47.46 Aligned_cols=79 Identities=19% Similarity=0.232 Sum_probs=54.7
Q ss_pred EEeeecCCCCCCCCccccccccCC-----CCeeEEeeCC--C----cceeEEEe----CCeeEEec-----CCCCeeEee
Q 038619 6 LAMNPISQMGKPEKVIRLTPHSDG-----STLTILLQVC--E----VEGLQIKK----DGKWTSVS-----PLRNAFIVN 65 (129)
Q Consensus 6 lrl~~Ypp~~~~~~~~g~~~HtD~-----~~lTll~qd~--~----~~GLqv~~----~g~W~~v~-----~~~~~~vvn 65 (129)
|++++|++ .-.+.+|+|. ..+|+++.-+ . -+.|++.. ++....++ |.+|.+++.
T Consensus 1 ~~~~~y~~------G~~~~~H~D~~~~~~~~~t~llyL~~~~~~~~GG~l~~~~~~~~~~~~~~~~~~~~~p~~g~~v~F 74 (100)
T PF13640_consen 1 MQLNRYPP------GGFFGPHTDNSYDPHRRVTLLLYLNDPEWEFEGGELEFYPSKDSDDVSREVEDFDIVPKPGRLVIF 74 (100)
T ss_dssp -EEEEEET------TEEEEEEESSSCCCSEEEEEEEESS-CS-HCEE--EEETTTS-TSSTCEEEGGGSEE-BTTEEEEE
T ss_pred CEEEEECc------CCEEeeeECCCCCCcceEEEEEEECCCCcccCCCEEEEeccccCCCcceEEEeccccCCCCEEEEE
Confidence 57788866 4458899999 4888885432 1 23477774 35566666 888888887
Q ss_pred cccceecccCCcceeecCC-CCCCCceeEeeee
Q 038619 66 IGDMFEVLTISINQWELPS-ASQERISISTFYK 97 (129)
Q Consensus 66 ~Gd~l~~~tng~~HRV~~~-~~~~R~S~~~f~~ 97 (129)
-+ ...+|+|... .+..|+++.+|+.
T Consensus 75 ~~-------~~~~H~v~~v~~~~~R~~l~~~~~ 100 (100)
T PF13640_consen 75 PS-------DNSLHGVTPVGEGGRRYSLTFWFH 100 (100)
T ss_dssp ES-------CTCEEEEEEE-EESEEEEEEEEEE
T ss_pred eC-------CCCeecCcccCCCCCEEEEEEEEC
Confidence 77 2269999887 6788999999874
No 29
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional
Probab=94.72 E-value=0.14 Score=39.65 Aligned_cols=78 Identities=14% Similarity=0.066 Sum_probs=50.7
Q ss_pred eEEeeecCCCCCCCCccccccccCCCC---------------eeEEeeCC---CcceeEEEeCCeeEEecCCCCeeEeec
Q 038619 5 PLAMNPISQMGKPEKVIRLTPHSDGST---------------LTILLQVC---EVEGLQIKKDGKWTSVSPLRNAFIVNI 66 (129)
Q Consensus 5 ~lrl~~Ypp~~~~~~~~g~~~HtD~~~---------------lTll~qd~---~~~GLqv~~~g~W~~v~~~~~~~vvn~ 66 (129)
-+++++|.+- -..++|.|... +|+.+.|. +-+.|.+.....=..|+|..|.+|+.-
T Consensus 81 ~~~f~rY~~G------~~y~~H~D~~~~~~~~~~~~~rs~lS~~lyLnd~~~yeGGEl~~~~~~g~~~Vkp~aG~~vlfp 154 (226)
T PRK05467 81 PPLFNRYEGG------MSYGFHVDNAVRSLPGTGGRVRTDLSATLFLSDPDDYDGGELVIEDTYGEHRVKLPAGDLVLYP 154 (226)
T ss_pred cceEEEECCC------CccCccccCCcccCCCCCcceeEEEEEEEEeCCCCCCcCCceEEecCCCcEEEecCCCeEEEEC
Confidence 4567888762 34666776642 23334432 134477775323367888888888877
Q ss_pred ccceecccCCcceeecCCCCCCCceeEeee
Q 038619 67 GDMFEVLTISINQWELPSASQERISISTFY 96 (129)
Q Consensus 67 Gd~l~~~tng~~HRV~~~~~~~R~S~~~f~ 96 (129)
.. .+|+|..-....||++.++.
T Consensus 155 s~--------~lH~v~pVt~G~R~~~~~Wi 176 (226)
T PRK05467 155 ST--------SLHRVTPVTRGVRVASFFWI 176 (226)
T ss_pred CC--------CceeeeeccCccEEEEEecH
Confidence 42 68999976778899987764
No 30
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues. Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.
Probab=94.36 E-value=0.27 Score=35.59 Aligned_cols=83 Identities=19% Similarity=0.155 Sum_probs=55.9
Q ss_pred ceEEeeecCCCCCCCCccccccccCCC--------CeeEEee--CCCcce-eEEEeCC--eeEEecCCCCeeEeecccce
Q 038619 4 EPLAMNPISQMGKPEKVIRLTPHSDGS--------TLTILLQ--VCEVEG-LQIKKDG--KWTSVSPLRNAFIVNIGDMF 70 (129)
Q Consensus 4 ~~lrl~~Ypp~~~~~~~~g~~~HtD~~--------~lTll~q--d~~~~G-Lqv~~~g--~W~~v~~~~~~~vvn~Gd~l 70 (129)
..+++.+|.+ .-...+|.|.. .+|+++. |...+| |.+...+ ....|.|..|.+++.-...-
T Consensus 83 ~~~~~~~Y~~------g~~~~~H~D~~~~~~~~~r~~T~~~yLn~~~~GG~~~f~~~~~~~~~~v~P~~G~~v~f~~~~~ 156 (178)
T smart00702 83 EDAQVARYGP------GGHYGPHVDNFEDDENGDRIATFLLYLNDVEEGGELVFPGLGLMVCATVKPKKGDLLFFPSGRG 156 (178)
T ss_pred cceEEEEECC------CCcccCcCCCCCCCCCCCeEEEEEEEeccCCcCceEEecCCCCccceEEeCCCCcEEEEeCCCC
Confidence 4577888877 23477899965 5777655 322344 6666544 36688898888877543200
Q ss_pred ecccCCcceeecCCCCCCCceeEeeee
Q 038619 71 EVLTISINQWELPSASQERISISTFYK 97 (129)
Q Consensus 71 ~~~tng~~HRV~~~~~~~R~S~~~f~~ 97 (129)
..+|.|.......|+++..+++
T Consensus 157 -----~~~H~v~pv~~G~r~~~~~W~~ 178 (178)
T smart00702 157 -----RSLHGVCPVTRGSRWAITGWIR 178 (178)
T ss_pred -----CccccCCcceeCCEEEEEEEEC
Confidence 2789998777789999988763
No 31
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro []. Interestingly TET2 is considered as an oncogene, as it is found mutated in some types of cancer []. This entry represents the double-stranded beta helix (DSBH) fold of the 2-oxoglutarate (2OG) - Fe(II) oxygenases. DSBH comprises a part of the catalytic domain in TETS. It is found in many organisms including fruit fly, African malaria mosquito, zebrafish, mouse and human.
Probab=94.03 E-value=0.22 Score=36.68 Aligned_cols=70 Identities=11% Similarity=-0.021 Sum_probs=45.7
Q ss_pred cccccccCC----CCeeEEeeCC---CcceeEEEeC----CeeEEecCCCCeeEeecccceecccCCcceeecCCC----
Q 038619 21 IRLTPHSDG----STLTILLQVC---EVEGLQIKKD----GKWTSVSPLRNAFIVNIGDMFEVLTISINQWELPSA---- 85 (129)
Q Consensus 21 ~g~~~HtD~----~~lTll~qd~---~~~GLqv~~~----g~W~~v~~~~~~~vvn~Gd~l~~~tng~~HRV~~~~---- 85 (129)
.....|.|. ...|+++.-. ..+|+.+... .-=+.+.+.+|++++..|..+ .|-|..-.
T Consensus 85 r~t~~HrD~~~~~~~~~~~~t~~~gd~~~g~l~lp~~~~~~~g~~~~~~~GtVl~~~~~~~-------~Hgvtpv~~~~~ 157 (171)
T PF12851_consen 85 RCTHSHRDTHNMPNGYDVLCTLGRGDYDGGRLELPGLDPNILGVAFAYQPGTVLIFCAKRE-------LHGVTPVESPNR 157 (171)
T ss_pred cCccceecCCCCCCCeEEEEecCCccccCceEeccccccccCCEEEecCCCcEEEEcccce-------eeecCcccCCCC
Confidence 457789999 7778877631 1345444432 244667788888888887544 45554322
Q ss_pred -CCCCceeEeeee
Q 038619 86 -SQERISISTFYK 97 (129)
Q Consensus 86 -~~~R~S~~~f~~ 97 (129)
+..|+|++||++
T Consensus 158 ~~~~R~slvfy~h 170 (171)
T PF12851_consen 158 NHGTRISLVFYQH 170 (171)
T ss_pred CCCeEEEEEEEeE
Confidence 368999999986
No 32
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional
Probab=92.34 E-value=1 Score=34.61 Aligned_cols=79 Identities=15% Similarity=0.166 Sum_probs=50.0
Q ss_pred CceEEeeecCCCCCCCCccccccccCCC-------CeeEEeeCCCcceeEEE---eCCeeEEecCCCCeeEeecccceec
Q 038619 3 LEPLAMNPISQMGKPEKVIRLTPHSDGS-------TLTILLQVCEVEGLQIK---KDGKWTSVSPLRNAFIVNIGDMFEV 72 (129)
Q Consensus 3 ~~~lrl~~Ypp~~~~~~~~g~~~HtD~~-------~lTll~qd~~~~GLqv~---~~g~W~~v~~~~~~~vvn~Gd~l~~ 72 (129)
.+..-+|+|.+- . +++.|.|-. ++++=+.+ ..=+.+. +++.+..+.-.+|.++|.-|+. +.
T Consensus 115 p~a~LvN~Y~~G-----~-~mg~H~D~~E~~~~~pI~SvSLG~--~~~F~~~~~~~~~~~~~l~L~~Gdllvm~G~s-r~ 185 (213)
T PRK15401 115 PDACLINRYAPG-----A-KLSLHQDKDERDFRAPIVSVSLGL--PAVFQFGGLKRSDPLQRILLEHGDVVVWGGPS-RL 185 (213)
T ss_pred CCEEEEEeccCc-----C-ccccccCCCcccCCCCEEEEeCCC--CeEEEecccCCCCceEEEEeCCCCEEEECchH-hh
Confidence 356778999862 2 799999942 22222221 2223343 2456899999999999999997 66
Q ss_pred ccCCcceeecCCC-------CCCCceeEe
Q 038619 73 LTISINQWELPSA-------SQERISIST 94 (129)
Q Consensus 73 ~tng~~HRV~~~~-------~~~R~S~~~ 94 (129)
| .|.|.... +..|+|+.|
T Consensus 186 ~----~HgVp~~~~~~~p~~g~~RINLTF 210 (213)
T PRK15401 186 R----YHGILPLKAGEHPLTGECRINLTF 210 (213)
T ss_pred e----eccCCcCCCCcCCCCCCCeEEEEe
Confidence 6 45553221 236999887
No 33
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A ....
Probab=91.11 E-value=1.1 Score=32.70 Aligned_cols=79 Identities=18% Similarity=0.179 Sum_probs=44.7
Q ss_pred CceEEeeecCCCCCCCCccccccccCCCCe-------eEEeeCCCcceeEEEe---CCeeEEecCCCCeeEeecccceec
Q 038619 3 LEPLAMNPISQMGKPEKVIRLTPHSDGSTL-------TILLQVCEVEGLQIKK---DGKWTSVSPLRNAFIVNIGDMFEV 72 (129)
Q Consensus 3 ~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~l-------Tll~qd~~~~GLqv~~---~g~W~~v~~~~~~~vvn~Gd~l~~ 72 (129)
....-+|+|.+ +. ++++|.|.-.+ +|=+. ...-+.+.. .+..+.+...+|+++|.-|++=..
T Consensus 96 ~n~~liN~Y~~-----g~-~i~~H~D~~~~~~~~~I~slSLG--~~~~~~f~~~~~~~~~~~~~L~~gsl~vm~g~~r~~ 167 (194)
T PF13532_consen 96 PNQCLINYYRD-----GS-GIGPHSDDEEYGFGPPIASLSLG--SSRVFRFRNKSDDDEPIEVPLPPGSLLVMSGEARYD 167 (194)
T ss_dssp -SEEEEEEESS-----TT--EEEE---TTC-CCSEEEEEEEE--S-EEEEEEECGGTS-EEEEEE-TTEEEEEETTHHHH
T ss_pred CCEEEEEecCC-----CC-CcCCCCCcccccCCCcEEEEEEc--cCceEEEeeccCCCccEEEEcCCCCEEEeChHHhhh
Confidence 45667888977 33 89999998733 22222 122344443 478999999999999999988666
Q ss_pred ccCCcceeecCCC---------CCCCceeEe
Q 038619 73 LTISINQWELPSA---------SQERISIST 94 (129)
Q Consensus 73 ~tng~~HRV~~~~---------~~~R~S~~~ 94 (129)
| |.|.... ...|+|+.|
T Consensus 168 ~-----H~I~~~~~~~~~~~~~~~~RislTf 193 (194)
T PF13532_consen 168 W-----HGIPPVKKDTHPSHYVRGRRISLTF 193 (194)
T ss_dssp E-----EEE-S-SCEEEESTEE-S-EEEEEE
T ss_pred e-----eEcccccCCccccccCCCCEEEEEe
Confidence 6 4444332 247999876
No 34
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A.
Probab=87.70 E-value=0.74 Score=30.50 Aligned_cols=37 Identities=27% Similarity=0.257 Sum_probs=23.4
Q ss_pred CeeEEecCCCCeeEeecccceecccCCcceeecCCCC-CCCceeEe
Q 038619 50 GKWTSVSPLRNAFIVNIGDMFEVLTISINQWELPSAS-QERISIST 94 (129)
Q Consensus 50 g~W~~v~~~~~~~vvn~Gd~l~~~tng~~HRV~~~~~-~~R~S~~~ 94 (129)
..+..++|.+|.++|+-+.+ .|+|....+ .+|+|++|
T Consensus 63 ~~~~~~~p~~G~lvlFPs~l--------~H~v~p~~~~~~Risisf 100 (101)
T PF13759_consen 63 SPYYIVEPEEGDLVLFPSWL--------WHGVPPNNSDEERISISF 100 (101)
T ss_dssp -SEEEE---TTEEEEEETTS--------EEEE----SSS-EEEEEE
T ss_pred CceEEeCCCCCEEEEeCCCC--------EEeccCcCCCCCEEEEEc
Confidence 46788999999999998843 899987754 58999997
No 35
>TIGR02466 conserved hypothetical protein. This family consists of uncharacterized proteins in Caulobacter crescentus CB15, Bdellovibrio bacteriovorus HD100, Synechococcus sp. WH 8102 (2), Silicibacter pomeroyi DSS-3 (2), and Hyphomonas neptunium ATCC 15444. The context of nearby genes differs substantially between members and does point to any specific biological role.
Probab=84.66 E-value=1.4 Score=33.37 Aligned_cols=38 Identities=29% Similarity=0.354 Sum_probs=30.9
Q ss_pred eeEEecCCCCeeEeecccceecccCCcceeecCCCC-CCCceeEeee
Q 038619 51 KWTSVSPLRNAFIVNIGDMFEVLTISINQWELPSAS-QERISISTFY 96 (129)
Q Consensus 51 ~W~~v~~~~~~~vvn~Gd~l~~~tng~~HRV~~~~~-~~R~S~~~f~ 96 (129)
.|+.+.|.+|.++++-+. + .|+|..+.+ .+|+|++|=+
T Consensus 160 ~~~~v~P~~G~lvlFPS~----L----~H~v~p~~~~~~RISiSFNl 198 (201)
T TIGR02466 160 RFVYVPPQEGRVLLFESW----L----RHEVPPNESEEERISVSFNY 198 (201)
T ss_pred ccEEECCCCCeEEEECCC----C----ceecCCCCCCCCEEEEEEee
Confidence 578889999988888873 3 899998764 7899999854
No 36
>TIGR00568 alkb DNA alkylation damage repair protein AlkB. Proteins in this family have an as of yet undetermined function in the repair of alkylation damage to DNA. Alignment and family designation based on phylogenomic analysis of Jonathan A. Eisen (PhD Thesis, Stanford University, 1999).
Probab=61.81 E-value=30 Score=25.37 Aligned_cols=59 Identities=12% Similarity=0.103 Sum_probs=36.7
Q ss_pred CceEEeeecCCCCCCCCccccccccCCCCe-------eEEeeCCCcceeEEE---eCCeeEEecCCCCeeEeecccc
Q 038619 3 LEPLAMNPISQMGKPEKVIRLTPHSDGSTL-------TILLQVCEVEGLQIK---KDGKWTSVSPLRNAFIVNIGDM 69 (129)
Q Consensus 3 ~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~l-------Tll~qd~~~~GLqv~---~~g~W~~v~~~~~~~vvn~Gd~ 69 (129)
+...-+|+|++- -++++|.|-.-+ ++=+.+ ..=+.+. +++....+.-.+|+++|.-|+.
T Consensus 94 ~n~~LvN~Y~~G------d~mg~H~D~~e~~~~~pI~SvSLG~--~r~F~~~~~~~~~~~~~l~L~sGsllvM~G~s 162 (169)
T TIGR00568 94 PDACLVNRYAPG------ATLSLHQDRDEPDLRAPLLSVSLGL--PAIFLIGGLKRNDPPKRLRLHSGDVVIMGGES 162 (169)
T ss_pred CCEEEEEeecCC------CccccccccccccCCCCEEEEeCCC--CEEEEecCCcCCCceEEEEeCCCCEEEECCch
Confidence 456788999873 369999995322 111110 1113332 2456788888999999988863
No 37
>COG3695 Predicted methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair]
Probab=54.55 E-value=4.5 Score=27.64 Aligned_cols=26 Identities=23% Similarity=0.294 Sum_probs=20.4
Q ss_pred ecccceecccCC---cceeecCCCCCCCcee
Q 038619 65 NIGDMFEVLTIS---INQWELPSASQERISI 92 (129)
Q Consensus 65 n~Gd~l~~~tng---~~HRV~~~~~~~R~S~ 92 (129)
.+|-.|..++.| +.|||+... .|+|.
T Consensus 41 qVG~il~~l~~~s~lPWhRVvns~--G~isl 69 (103)
T COG3695 41 QVGRILKHLPEGSDLPWHRVVNSD--GRISL 69 (103)
T ss_pred HHHHHHhhCCCCCCCChhheecCC--CcccC
Confidence 468889999999 999999765 45553
No 38
>PF05118 Asp_Arg_Hydrox: Aspartyl/Asparaginyl beta-hydroxylase; InterPro: IPR007803 The alpha-ketoglutarate-dependent dioxygenase aspartyl (asparaginyl) beta-hydroxylase (1.14.11.16 from EC) specifically hydroxylates one aspartic or asparagine residue in certain epidermal growth factor-like domains of a number of proteins. Its action may be due to histidine-675, which, when mutated to an alanine residue, causes the loss of enzymatic activity in the protein []. An invertebrate alpha-ketoglutarate-dependent aspartyl/asparaginyl beta-hydroxylase, which posttranslationally hydroxylates specific aspartyl or asparaginyl residues within epidermal growth factor-like modules [], activity was found to be similar to that of the purified mammalian aspartyl/asparaginyl beta-hydroxylase with respect to cofactor requirements, stereochemistry and substrate sequence specificity []. This enzyme requires Fe2+ as a cofactor. Some vitamin K-dependent coagulation factors, as well as synthetic peptides based on the structure of the first epidermal growth factor domain of human coagulation factor IX or X, can act as acceptors.; GO: 0018193 peptidyl-amino acid modification, 0030176 integral to endoplasmic reticulum membrane; PDB: 3RCQ_A 1E5S_A 1E5R_B.
Probab=53.62 E-value=49 Score=23.81 Aligned_cols=32 Identities=6% Similarity=0.137 Sum_probs=18.9
Q ss_pred EeecccceecccCC--------cceeecCCCCCCCceeEe
Q 038619 63 IVNIGDMFEVLTIS--------INQWELPSASQERISIST 94 (129)
Q Consensus 63 vvn~Gd~l~~~tng--------~~HRV~~~~~~~R~S~~~ 94 (129)
.+.+|+.-..|..| -.|.|...++.+|+-+.+
T Consensus 118 ~~~v~~~~~~w~~G~~~~fD~s~~H~~~N~~~~~Rv~L~v 157 (163)
T PF05118_consen 118 YIRVGGETRHWREGECWVFDDSFEHEVWNNGDEDRVVLIV 157 (163)
T ss_dssp EEEETTEEEB--CTEEEEE-TTS-EEEEESSSS-EEEEEE
T ss_pred EEEECCeEEEeccCcEEEEeCCEEEEEEeCCCCCEEEEEE
Confidence 33344555556666 789999888888887654
No 39
>PF02678 Pirin: Pirin; InterPro: IPR003829 This entry represents N-terminal domain of Pirin proteins from both eukaryotes and prokaryotes. The function of Pirin is unknown but the gene coding for this protein is known to be expressed in all tissues in the human body although it is expressed most strongly in the liver and heart. Pirin is known to be a nuclear protein, exclusively localised within the nucleoplasma and predominantly concentrated within dot-like subnuclear structures []. Pirin is composed of two structurally similar domains arranged face to face. The N-terminal domain additionally features four beta-strands, and the C-terminal domain also includes four additional -strands and a short alpha-helix. Although the two domains are similar, the C-terminal domain of Pirin differs from the N-terminal domain as it does not contain a metal binding site and its sequence does not contain the conserved metal-coordinating residues []. Pirin is confirmed to be a member of the cupin superfamily on the basis of primary sequence and structural similarity. The presence of a metal binding site in the N-terminal beta-barrel of Pirin, may be significant in its role in regulating NFI DNA replication and NF-kappaB transcription factor activity []. Pirin structure has been found to closely resemble members of the cupin superfamily. Pirin contains the two characteristic sequences of the cupin superfamily, namely PG-(X)5-HXH-(X)4-E-(X)6-G and G-(X)5-PXG-(X)2-H-(X)3-N separated by a variable stretch of 15-50 amino acids. These motifs are best conserved in the N-terminal where the conserved histidine and glutamic acid residues correspond to the metal-coordinating residues. The C-terminal domain motifs lack the metal binding residues normally associated with the cupin fold []. Pirin was identified to be a metal-binding protein [], and was found that the metal-binding residues of Pirins are highly conserved across mammals, plants, fungi, and prokaryotic organisms. Pirin acts as a cofactor for the transcription factor NFI, the regulatory mechanism of which is generally believed to require the assistance of a metal ion []. Structural data supports the hypothesis that the bound iron of Pirin may participate in this transcriptional regulation by enhancing and stabilising the formation of the p50,Bcl3,DNA complex []. Metals have been implicated directly or indirectly in the NF-kappaB family of transcription factors that control expression of a number of early response genes associated with inflammatory responses, cell growth, cell cycle progression, and neoplastic transformation []. However, most metal-dependent transcription factors are DNA-binding proteins that bind to specific sequences when the metal binds to the protein. Pirin, on the other hand, appears to function differently and bind to the transcription factor DNA complex [].; PDB: 2VEC_A 1J1L_A 3ACL_A 2P17_A 1TQ5_A.
Probab=48.82 E-value=47 Score=22.56 Aligned_cols=56 Identities=20% Similarity=0.230 Sum_probs=32.5
Q ss_pred CCccccccccCCCCeeEEeeCCCcceeEEEeCCeeEEecCCCCeeEeecccceecccCC--cceeecCCCC
Q 038619 18 EKVIRLTPHSDGSTLTILLQVCEVEGLQIKKDGKWTSVSPLRNAFIVNIGDMFEVLTIS--INQWELPSAS 86 (129)
Q Consensus 18 ~~~~g~~~HtD~~~lTll~qd~~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~l~~~tng--~~HRV~~~~~ 86 (129)
...++.-+|.+...+|.+++ +.++-.+ ...+.-++..| -++.+|-| ..|.-....+
T Consensus 39 ~~gf~~HPH~g~eivTyv~~----G~~~H~D--------s~G~~~~l~~G-~vq~m~AG~Gi~H~E~~~~~ 96 (107)
T PF02678_consen 39 GAGFPMHPHRGFEIVTYVLE----GELRHRD--------SLGNRGVLRAG-DVQWMTAGSGIVHSERNASD 96 (107)
T ss_dssp TTEEEEEEECSEEEEEEEEE----SEEEEEE--------TTSEEEEEETT-EEEEEE-TTTEEEEEEE-TS
T ss_pred CCCCCCcCCCCceEEEEEec----CEEEEEC--------CCCCeeEeCCC-eEEEEeCCCCceEEEecCCC
Confidence 45678889999999999987 2333333 22223345555 34555555 7776655443
No 40
>PLN00052 prolyl 4-hydroxylase; Provisional
Probab=43.49 E-value=87 Score=25.33 Aligned_cols=43 Identities=14% Similarity=0.174 Sum_probs=31.5
Q ss_pred EEecCCCCeeEeecccceecccCC-----cceeecCCCCCCCceeEeeeeCC
Q 038619 53 TSVSPLRNAFIVNIGDMFEVLTIS-----INQWELPSASQERISISTFYKAR 99 (129)
Q Consensus 53 ~~v~~~~~~~vvn~Gd~l~~~tng-----~~HRV~~~~~~~R~S~~~f~~p~ 99 (129)
+.|+|..|..++.-- ...|| ++|....--...++++..+++..
T Consensus 206 l~VkPkkG~ALlF~n----l~~dG~~D~~SlHagcPVi~G~Kw~atkWi~~~ 253 (310)
T PLN00052 206 LAVKPVKGDAVLFFS----LHIDGVPDPLSLHGSCPVIEGEKWSAPKWIHIR 253 (310)
T ss_pred eEeccCcceEEEEec----cCCCCCCCcccccCCCeeecCeEEEEEEeeecc
Confidence 778888887766543 22345 89988766667899999888877
No 41
>COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes [Carbohydrate transport and metabolism / General function prediction only]
Probab=41.84 E-value=88 Score=24.04 Aligned_cols=66 Identities=18% Similarity=0.185 Sum_probs=37.9
Q ss_pred eEEeeecCCCC-CCCCccccccccCCCCeeEEeeCCCcceeEEEe--CCeeEEecCCCCeeEeecccc----eecccCC
Q 038619 5 PLAMNPISQMG-KPEKVIRLTPHSDGSTLTILLQVCEVEGLQIKK--DGKWTSVSPLRNAFIVNIGDM----FEVLTIS 76 (129)
Q Consensus 5 ~lrl~~Ypp~~-~~~~~~g~~~HtD~~~lTll~qd~~~~GLqv~~--~g~W~~v~~~~~~~vvn~Gd~----l~~~tng 76 (129)
.+|.+||-|.. ++|-...+. |--.+++|+. .+-..+.. .|+=+-||+.-++.++|+||- +..+.++
T Consensus 91 ~~~~~H~Hp~ade~E~y~vi~-----G~g~m~v~~~-~G~~~v~~~~~Gd~iyVPp~~gH~t~N~Gd~pLvf~~v~~~~ 163 (209)
T COG2140 91 AMRELHYHPNADEPEIYYVLK-----GEGRMLVQKP-EGEARVIAVRAGDVIYVPPGYGHYTINTGDEPLVFLNVYPAD 163 (209)
T ss_pred cccccccCCCCCcccEEEEEe-----ccEEEEEEcC-CCcEEEEEecCCcEEEeCCCcceEeecCCCCCEEEEEEEeCC
Confidence 45666666543 233222222 2234455532 23344443 688899999999999999984 4444444
No 42
>smart00460 TGc Transglutaminase/protease-like homologues. Transglutaminases are enzymes that establish covalent links between proteins. A subset of transglutaminase homologues appear to catalyse the reverse reaction, the hydrolysis of peptide bonds. Proteins with this domain are both extracellular and intracellular, and it is likely that the eukaryotic intracellular proteins are involved in signalling events.
Probab=37.64 E-value=36 Score=19.93 Aligned_cols=17 Identities=24% Similarity=0.540 Sum_probs=13.2
Q ss_pred eeEEEeCCeeEEecCCC
Q 038619 43 GLQIKKDGKWTSVSPLR 59 (129)
Q Consensus 43 GLqv~~~g~W~~v~~~~ 59 (129)
=+||+.+++|+.+.|.+
T Consensus 52 W~ev~~~~~W~~~D~~~ 68 (68)
T smart00460 52 WAEVYLEGGWVPVDPTP 68 (68)
T ss_pred EEEEEECCCeEEEeCCC
Confidence 36777789999998754
No 43
>PF14402 7TM_transglut: 7 transmembrane helices usually fused to an inactive transglutaminase
Probab=31.23 E-value=86 Score=25.56 Aligned_cols=52 Identities=13% Similarity=0.029 Sum_probs=33.2
Q ss_pred cceeEEEeCCeeEEecCCCCeeEeecccceecccCC-cceeecCCCCCCCceeEe
Q 038619 41 VEGLQIKKDGKWTSVSPLRNAFIVNIGDMFEVLTIS-INQWELPSASQERISIST 94 (129)
Q Consensus 41 ~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~l~~~tng-~~HRV~~~~~~~R~S~~~ 94 (129)
.+=+||+++++|..+.|..|.. -.-.|.|-.+.++ ++=.|...+ ..|+|++.
T Consensus 32 ~~~lev~~~~~W~~f~p~tg~~-g~p~n~L~W~~g~~~ll~v~Gg~-ns~v~Fs~ 84 (313)
T PF14402_consen 32 EPWLEVFNGGKWVLFNPRTGEQ-GLPENFLLWWRGDESLLDVEGGK-NSQVSFSM 84 (313)
T ss_pred HhHHheeeCCeEEEECCCCCCc-CCCCCEEEEEECCcccEEEEcCc-CCeEEEEE
Confidence 3447889999999999988876 4456666555555 555555332 34444333
No 44
>COG1741 Pirin-related protein [General function prediction only]
Probab=29.13 E-value=2.4e+02 Score=22.40 Aligned_cols=18 Identities=28% Similarity=0.303 Sum_probs=15.2
Q ss_pred ccccccccCCCCeeEEee
Q 038619 20 VIRLTPHSDGSTLTILLQ 37 (129)
Q Consensus 20 ~~g~~~HtD~~~lTll~q 37 (129)
.++--+|.+..+||.+++
T Consensus 56 ~f~pHPHrg~etvTyvl~ 73 (276)
T COG1741 56 GFPPHPHRGLETVTYVLD 73 (276)
T ss_pred cCCCCCCCCcEEEEEEEc
Confidence 466778899999999998
No 45
>TIGR02451 anti_sig_ChrR anti-sigma factor, putative, ChrR family. The member of this family from Rhodobacter sphaeroides has been shown both to form a complex with sigma(E) and to negatively regulate tetrapyrrole biosynthesis. This protein likely contains (at least) two distinct functional domains; several smaller homologs (excluded by the model) show homology only to the C-terminal, including a motif PxHxHxGxE.
Probab=26.62 E-value=1e+02 Score=23.31 Aligned_cols=10 Identities=10% Similarity=0.195 Sum_probs=5.4
Q ss_pred eCCeeEEecC
Q 038619 48 KDGKWTSVSP 57 (129)
Q Consensus 48 ~~g~W~~v~~ 57 (129)
..|+|+..++
T Consensus 166 ~~Gd~i~~p~ 175 (215)
T TIGR02451 166 GVGDFEEADG 175 (215)
T ss_pred CCCeEEECCC
Confidence 3566665544
No 46
>PF11142 DUF2917: Protein of unknown function (DUF2917); InterPro: IPR021317 This bacterial family of proteins appears to be restricted to Proteobacteria.
Probab=24.82 E-value=1.7e+02 Score=17.75 Aligned_cols=33 Identities=12% Similarity=0.284 Sum_probs=27.6
Q ss_pred eEEEeCCeeEEecCCCCeeEeecccceecccCC
Q 038619 44 LQIKKDGKWTSVSPLRNAFIVNIGDMFEVLTIS 76 (129)
Q Consensus 44 Lqv~~~g~W~~v~~~~~~~vvn~Gd~l~~~tng 76 (129)
|++...--|+.+.-.++..++..||.|..-.++
T Consensus 20 l~v~~G~vWlT~~g~~~D~~L~~G~~l~l~~g~ 52 (63)
T PF11142_consen 20 LRVESGRVWLTREGDPDDYWLQAGDSLRLRRGG 52 (63)
T ss_pred EEEccccEEEECCCCCCCEEECCCCEEEeCCCC
Confidence 555566789999999999999999999877655
No 47
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=23.59 E-value=1.7e+02 Score=26.24 Aligned_cols=56 Identities=16% Similarity=0.134 Sum_probs=37.0
Q ss_pred ccccccccCCCCeeEEeeCCCcceeE-EEeCCeeEEecCC-------------CCeeEeecccceecccCC
Q 038619 20 VIRLTPHSDGSTLTILLQVCEVEGLQ-IKKDGKWTSVSPL-------------RNAFIVNIGDMFEVLTIS 76 (129)
Q Consensus 20 ~~g~~~HtD~~~lTll~qd~~~~GLq-v~~~g~W~~v~~~-------------~~~~vvn~Gd~l~~~tng 76 (129)
.-||-+|.-...||+|..++ +.=|. |..|+..+.+... ...+||-+|..|.-..-+
T Consensus 115 pQGCVWHPk~~iL~VLT~~d-vSV~~sV~~d~srVkaDi~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd 184 (671)
T PF15390_consen 115 PQGCVWHPKKAILTVLTARD-VSVLPSVHCDSSRVKADIKTSGLIHCACWTKDGQRLVVAVGSSLHSYIWD 184 (671)
T ss_pred CCcccccCCCceEEEEecCc-eeEeeeeeeCCceEEEeccCCceEEEEEecCcCCEEEEEeCCeEEEEEec
Confidence 46999999999999999853 43333 3446666655532 234777788777655444
No 48
>PF12852 Cupin_6: Cupin
Probab=23.03 E-value=2.1e+02 Score=20.44 Aligned_cols=40 Identities=13% Similarity=0.232 Sum_probs=28.1
Q ss_pred eeEEE-eCCeeEEecCCCCeeEeecccceecccCCcceeecC
Q 038619 43 GLQIK-KDGKWTSVSPLRNAFIVNIGDMFEVLTISINQWELP 83 (129)
Q Consensus 43 GLqv~-~~g~W~~v~~~~~~~vvn~Gd~l~~~tng~~HRV~~ 83 (129)
.+.+- ...-|+.++-....+.++.||++ .+.+|.-|+...
T Consensus 37 ~fh~V~~G~~~l~~~~~~~~~~L~~GDiv-llp~g~~H~l~~ 77 (186)
T PF12852_consen 37 SFHVVLRGSCWLRVPGGGEPIRLEAGDIV-LLPRGTAHVLSS 77 (186)
T ss_pred EEEEEECCeEEEEEcCCCCeEEecCCCEE-EEcCCCCeEeCC
Confidence 34433 35578887765677899999988 777777777643
No 49
>PF02373 JmjC: JmjC domain, hydroxylase; InterPro: IPR013129 Jumonji protein is required for neural tube formation in mice [].There is evidence of domain swapping within the jumonji family of transcription factors []. This domain is often associated with jmjN (see IPR003349 from INTERPRO) and belongs to the Cupin superfamily [].; PDB: 2YU2_A 2YU1_A 3AVR_A 3AVS_A 2OX0_B 2OQ6_B 2WWJ_A 2Q8D_A 3PDQ_A 2YBK_A ....
Probab=21.64 E-value=1e+02 Score=19.89 Aligned_cols=33 Identities=18% Similarity=0.332 Sum_probs=21.3
Q ss_pred cceeEE-EeCCeeEEecCCCCeeEeecccceecc
Q 038619 41 VEGLQI-KKDGKWTSVSPLRNAFIVNIGDMFEVL 73 (129)
Q Consensus 41 ~~GLqv-~~~g~W~~v~~~~~~~vvn~Gd~l~~~ 73 (129)
.+...+ ++.|+.+-++|.-=..++|.|+.+..-
T Consensus 78 i~~~~~~Q~~Ge~V~i~pg~~H~v~n~g~~i~~a 111 (114)
T PF02373_consen 78 IPVYRFVQKPGEFVFIPPGAYHQVFNLGDNISEA 111 (114)
T ss_dssp S--EEEEEETT-EEEE-TT-EEEEEESSSEEEEE
T ss_pred cccccceECCCCEEEECCCceEEEEeCCceEEEE
Confidence 344443 358999999998888999999887653
No 50
>PF11876 DUF3396: Protein of unknown function (DUF3396); InterPro: IPR021815 This family of proteins are functionally uncharacterised. This protein is found in bacteria and viruses. Proteins in this family are typically between 302 to 382 amino acids in length.
Probab=21.52 E-value=18 Score=27.45 Aligned_cols=44 Identities=18% Similarity=0.311 Sum_probs=33.0
Q ss_pred ccCCCCeeEEeeC--CCcceeEEE---eCCeeEEecCCCCeeEeecccc
Q 038619 26 HSDGSTLTILLQV--CEVEGLQIK---KDGKWTSVSPLRNAFIVNIGDM 69 (129)
Q Consensus 26 HtD~~~lTll~qd--~~~~GLqv~---~~g~W~~v~~~~~~~vvn~Gd~ 69 (129)
-...+.+|+|-+. +..+|.+.. -++.|+.+.+-++.++|.+|+.
T Consensus 104 Ik~v~WlT~Lg~~~l~~LGG~~~lr~~L~~~~~~i~~~~~g~vI~aG~~ 152 (208)
T PF11876_consen 104 IKGVNWLTFLGDPLLEKLGGEDALRSALPGPWIRIHPYGGGVVIQAGEW 152 (208)
T ss_pred CCCcchhheeCHHHHHhhccHHHHHhhCCCCceEEEECCCcEEEEeCCC
Confidence 3456789998773 235565532 2789999999999999999986
Done!