Query 038619
Match_columns 129
No_of_seqs 116 out of 1028
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 22:30:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038619.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038619hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w9y_A 1-aminocyclopropane-1-c 100.0 1.2E-43 4E-48 282.1 12.5 127 3-129 154-289 (319)
2 1gp6_A Leucoanthocyanidin diox 100.0 8.4E-43 2.9E-47 280.6 11.3 125 3-128 209-340 (356)
3 3oox_A Putative 2OG-Fe(II) oxy 100.0 3.8E-42 1.3E-46 272.2 10.4 125 3-128 168-304 (312)
4 1dcs_A Deacetoxycephalosporin 100.0 1.2E-40 4.1E-45 263.8 8.5 126 3-129 156-301 (311)
5 1odm_A Isopenicillin N synthas 100.0 1.3E-39 4.5E-44 259.5 8.2 122 3-128 179-319 (331)
6 3on7_A Oxidoreductase, iron/as 100.0 5E-37 1.7E-41 240.0 8.0 110 4-128 150-272 (280)
7 3dkq_A PKHD-type hydroxylase S 94.5 0.14 4.7E-06 38.8 7.4 78 6-97 101-194 (243)
8 3s57_A Alpha-ketoglutarate-dep 93.7 0.22 7.4E-06 36.5 6.9 82 3-95 99-200 (204)
9 2rg4_A Uncharacterized protein 93.7 0.22 7.6E-06 36.7 7.0 42 50-99 166-208 (216)
10 2hbt_A EGL nine homolog 1; pro 93.6 0.3 1E-05 36.7 7.8 81 6-99 119-214 (247)
11 3i3q_A Alpha-ketoglutarate-dep 93.6 0.33 1.1E-05 35.9 7.8 79 4-95 105-200 (211)
12 2iuw_A Alkylated repair protei 93.5 0.34 1.2E-05 36.2 7.9 83 3-96 125-228 (238)
13 3tht_A Alkylated DNA repair pr 88.7 0.73 2.5E-05 36.5 5.5 66 3-76 197-269 (345)
14 2jig_A Prolyl-4 hydroxylase; h 88.4 0.57 2E-05 34.2 4.5 85 5-99 99-218 (224)
15 3itq_A Prolyl 4-hydroxylase, a 86.7 1.5 5E-05 32.4 5.8 84 4-98 111-212 (216)
16 1e5r_A Proline oxidase; oxidor 76.3 5.4 0.00018 30.9 5.8 65 22-96 103-175 (290)
17 1tq5_A Protein YHHW; bicupin, 69.2 11 0.00036 28.1 5.8 20 18-37 51-70 (242)
18 2p17_A Pirin-like protein; GK1 67.0 4.7 0.00016 30.7 3.5 31 5-37 38-68 (277)
19 2vec_A YHAK, pirin-like protei 53.8 35 0.0012 25.6 6.2 20 18-37 74-93 (256)
20 3dl3_A Tellurite resistance pr 40.0 30 0.001 23.2 3.5 22 77-99 80-101 (119)
21 3rcq_A Aspartyl/asparaginyl be 38.1 1E+02 0.0035 22.1 6.4 37 63-99 140-185 (197)
22 1j1l_A Pirin; beta sandwich, c 34.6 46 0.0016 25.3 4.3 19 19-37 51-70 (290)
23 3kt7_A PKHD-type hydroxylase T 28.7 1.9E+02 0.0064 24.8 7.3 81 6-99 126-229 (633)
24 2ww6_A Fibritin, T4 fibritin; 26.0 51 0.0018 16.3 2.1 13 44-56 12-24 (27)
25 2opk_A Hypothetical protein; p 23.8 70 0.0024 20.1 3.1 22 77-98 89-111 (112)
26 4diq_A Lysine-specific demethy 22.9 3.2E+02 0.011 22.5 7.6 79 17-97 172-264 (489)
No 1
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=1.2e-43 Score=282.09 Aligned_cols=127 Identities=27% Similarity=0.516 Sum_probs=116.0
Q ss_pred CceEEeeecCCCCCCCCccccccccCCCCeeEEeeCCCcceeEEEeCCeeEEecCCCCeeEeecccceecccCC----cc
Q 038619 3 LEPLAMNPISQMGKPEKVIRLTPHSDGSTLTILLQVCEVEGLQIKKDGKWTSVSPLRNAFIVNIGDMFEVLTIS----IN 78 (129)
Q Consensus 3 ~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTll~qd~~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~l~~~tng----~~ 78 (129)
.+.||++|||||++++..+|+++|||+|+||||+||++++||||.++|+|++|+|.+|++|||+||+||+|||| +.
T Consensus 154 ~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~~ 233 (319)
T 1w9y_A 154 NFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVM 233 (319)
T ss_dssp EEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCC
T ss_pred cceeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeeccc
Confidence 35799999999998888899999999999999999656999999999999999999999999999999999999 99
Q ss_pred eeecCCCCCCCceeEeeeeCC--eEEecCCcccCCC---CCCCCccccHHHHhhcC
Q 038619 79 QWELPSASQERISISTFYKAR--YEEHPASSLISEE---TPALFRRVTVEEYLRGR 129 (129)
Q Consensus 79 HRV~~~~~~~R~S~~~f~~p~--~~i~pl~~~~~~~---~~~~y~~~~~~dyl~~~ 129 (129)
|||+.+++++|+|++||+.|+ ++|+|++++++++ +|++|++++++||++.+
T Consensus 234 HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~ 289 (319)
T 1w9y_A 234 HRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLY 289 (319)
T ss_dssp EEECCCSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTT
T ss_pred ceecCCCCCCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHH
Confidence 999999889999999999999 9999999999987 59999999999999753
No 2
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=8.4e-43 Score=280.57 Aligned_cols=125 Identities=28% Similarity=0.444 Sum_probs=119.6
Q ss_pred CceEEeeecCCCCCCCCccccccccCCCCeeEEeeCCCcceeEEEeCCeeEEecCCCCeeEeecccceecccCC----cc
Q 038619 3 LEPLAMNPISQMGKPEKVIRLTPHSDGSTLTILLQVCEVEGLQIKKDGKWTSVSPLRNAFIVNIGDMFEVLTIS----IN 78 (129)
Q Consensus 3 ~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTll~qd~~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~l~~~tng----~~ 78 (129)
.+.||++||||+++++..+|+++|||+|+||||+|| +++||||+++|+|++|+|.+|++|||+||+||+|||| ++
T Consensus 209 ~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd-~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~ 287 (356)
T 1gp6_A 209 LLQMKINYYPKCPQPELALGVEAHTDVSALTFILHN-MVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSIL 287 (356)
T ss_dssp EEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEEC-SCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCC
T ss_pred cceeeeeecCCCCCcccccCcCCccCCCeEEEEEEc-CCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccC
Confidence 468999999999988889999999999999999996 5999999999999999999999999999999999999 99
Q ss_pred eeecCCCCCCCceeEeeeeCC--e-EEecCCcccCCCCCCCCccccHHHHhhc
Q 038619 79 QWELPSASQERISISTFYKAR--Y-EEHPASSLISEETPALFRRVTVEEYLRG 128 (129)
Q Consensus 79 HRV~~~~~~~R~S~~~f~~p~--~-~i~pl~~~~~~~~~~~y~~~~~~dyl~~ 128 (129)
|||+.+++++|||++||+.|+ + +|+|+++++++++|++|++++++||++.
T Consensus 288 HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~~~~~~p~~y~~~t~~eyl~~ 340 (356)
T 1gp6_A 288 HRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEH 340 (356)
T ss_dssp EEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCCSSSCCSSCCEEHHHHHHH
T ss_pred ceecCCCCCCEEEEEEeecCCCCCcEEeCChhhcCCCCCccCCCccHHHHHHH
Confidence 999999889999999999999 8 9999999999999999999999999964
No 3
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=3.8e-42 Score=272.18 Aligned_cols=125 Identities=27% Similarity=0.457 Sum_probs=114.3
Q ss_pred CceEEeeecCCCCCCCCccccccccCCCCeeEEeeCCCcceeEEE-eCCeeEEecCCCCeeEeecccceecccCC----c
Q 038619 3 LEPLAMNPISQMGKPEKVIRLTPHSDGSTLTILLQVCEVEGLQIK-KDGKWTSVSPLRNAFIVNIGDMFEVLTIS----I 77 (129)
Q Consensus 3 ~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTll~qd~~~~GLqv~-~~g~W~~v~~~~~~~vvn~Gd~l~~~tng----~ 77 (129)
.+.||++||||+++++..+|+++|||+|+||||+|| +++||||+ ++|+|++|+|.+|++|||+||+||+|||| +
T Consensus 168 ~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd-~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~TnG~~kS~ 246 (312)
T 3oox_A 168 NSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGA-EEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERLTNNVLPST 246 (312)
T ss_dssp CCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECC-TTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHHTTTSSCCC
T ss_pred cceeeeEecCCCCCCcCCcCccceecCceEEEEeEc-CcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHHhCCeecCC
Confidence 468999999999876555999999999999999996 59999997 58999999999999999999999999999 9
Q ss_pred ceeecCCC----CCCCceeEeeeeCC--eEEecCCcccCCCCCCCCc-cccHHHHhhc
Q 038619 78 NQWELPSA----SQERISISTFYKAR--YEEHPASSLISEETPALFR-RVTVEEYLRG 128 (129)
Q Consensus 78 ~HRV~~~~----~~~R~S~~~f~~p~--~~i~pl~~~~~~~~~~~y~-~~~~~dyl~~ 128 (129)
+|||+.+. +.+|||++||+.|+ ++|+|+++++++++|++|+ +++++||++.
T Consensus 247 ~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~ 304 (312)
T 3oox_A 247 VHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQ 304 (312)
T ss_dssp CEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHH
T ss_pred CceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHH
Confidence 99998764 46799999999999 9999999999999999999 9999999975
No 4
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=1.2e-40 Score=263.78 Aligned_cols=126 Identities=18% Similarity=0.223 Sum_probs=111.1
Q ss_pred CceEEeeecCCCCCCC--C--ccccccccCCCCeeEEeeCCCcce---eEEEeCCeeEEecCCCCeeEeecccceecccC
Q 038619 3 LEPLAMNPISQMGKPE--K--VIRLTPHSDGSTLTILLQVCEVEG---LQIKKDGKWTSVSPLRNAFIVNIGDMFEVLTI 75 (129)
Q Consensus 3 ~~~lrl~~Ypp~~~~~--~--~~g~~~HtD~~~lTll~qd~~~~G---Lqv~~~g~W~~v~~~~~~~vvn~Gd~l~~~tn 75 (129)
.+.||++||||+++++ + .+|+++|||+|+||||+||++++| |||+++|+|++|+|.+|++|||+||+||+|||
T Consensus 156 ~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~p~pg~lvVNiGD~l~~~Tn 235 (311)
T 1dcs_A 156 EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDAVLVFCGAIATLVTG 235 (311)
T ss_dssp CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTT
T ss_pred chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeCCEEEeCcCCCCeEEEEHHHHHHHHhC
Confidence 3679999999998653 3 678999999999999999635899 99999999999999999999999999999999
Q ss_pred C----cceeecCCC-----CCCCceeEeeeeCC--eEEecCCcccCCCCCCCC--ccccHHHHhhcC
Q 038619 76 S----INQWELPSA-----SQERISISTFYKAR--YEEHPASSLISEETPALF--RRVTVEEYLRGR 129 (129)
Q Consensus 76 g----~~HRV~~~~-----~~~R~S~~~f~~p~--~~i~pl~~~~~~~~~~~y--~~~~~~dyl~~~ 129 (129)
| ++|||+.++ +++|+|++||+.|+ ++|+ +++++++++|++| ++++++||++.+
T Consensus 236 G~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~~p~~y~~~~~t~~ey~~~~ 301 (311)
T 1dcs_A 236 GQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLARECGFDVSLDGETATFQDWIGGN 301 (311)
T ss_dssp SCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHTTCCCCCCSSEEEHHHHHCSS
T ss_pred CcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCCCCccccCCCCccHHHHHHHH
Confidence 9 999999987 67899999999999 9999 9999998899999 999999999763
No 5
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=1.3e-39 Score=259.53 Aligned_cols=122 Identities=17% Similarity=0.200 Sum_probs=112.9
Q ss_pred CceEE--eeecC------C---CCCCCC-ccccccccCCCCeeEEeeCCCcceeEEE-eCCeeEEecCCCCeeEeecccc
Q 038619 3 LEPLA--MNPIS------Q---MGKPEK-VIRLTPHSDGSTLTILLQVCEVEGLQIK-KDGKWTSVSPLRNAFIVNIGDM 69 (129)
Q Consensus 3 ~~~lr--l~~Yp------p---~~~~~~-~~g~~~HtD~~~lTll~qd~~~~GLqv~-~~g~W~~v~~~~~~~vvn~Gd~ 69 (129)
.+.|| ++||| | +++++. .+|+++|||+|+||||+|| +++||||+ ++| |++|+|.+|++|||+||+
T Consensus 179 ~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd-~v~GLQV~~~~g-Wi~V~p~pgalvVNiGD~ 256 (331)
T 1odm_A 179 DTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQS-NVQNLQVETAAG-YQDIEADDTGYLINCGSY 256 (331)
T ss_dssp TCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEEC-SSCCEEEEETTE-EEECCCCTTSEEEEECHH
T ss_pred HHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeC-CCCCEEEEcCCC-eEECCCCCCeEEEEccHH
Confidence 46899 99999 7 666665 8999999999999999996 59999999 578 999999999999999999
Q ss_pred eecccCC----cceeecCCCCCCCceeEeeeeCC--eEEecCCcccCCCCCCCCccccHHHHhhc
Q 038619 70 FEVLTIS----INQWELPSASQERISISTFYKAR--YEEHPASSLISEETPALFRRVTVEEYLRG 128 (129)
Q Consensus 70 l~~~tng----~~HRV~~~~~~~R~S~~~f~~p~--~~i~pl~~~~~~~~~~~y~~~~~~dyl~~ 128 (129)
||+|||| ++|||+.+ +++|+|++||+.|+ ++|+|+++++++++ ++|++++++||++.
T Consensus 257 l~~~TnG~~kS~~HRVv~~-~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~-~~y~~~t~~e~l~~ 319 (331)
T 1odm_A 257 MAHLTNNYYKAPIHRVKWV-NAERQSLPFFVNLGYDSVIDPFDPREPNGK-SDREPLSYGDYLQN 319 (331)
T ss_dssp HHHHTTTSSCCCCEEEECC-CSCEEEEEEEECCCTTCBCCCCCTTSTTCC-CSSCCCBHHHHHHH
T ss_pred HHHHhCCEeeCCCceeCCC-CCCEEEEEEEEcCCCCCEEeCCCccccccc-cCCCCccHHHHHHH
Confidence 9999999 99999864 78999999999999 99999999998887 89999999999975
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=5e-37 Score=240.05 Aligned_cols=110 Identities=29% Similarity=0.418 Sum_probs=99.7
Q ss_pred ceEEeeecCCCCCCC--CccccccccCCCCeeEEeeCCCcceeEEE-eCCeeEEecCCCCeeEeecccceecccCC----
Q 038619 4 EPLAMNPISQMGKPE--KVIRLTPHSDGSTLTILLQVCEVEGLQIK-KDGKWTSVSPLRNAFIVNIGDMFEVLTIS---- 76 (129)
Q Consensus 4 ~~lrl~~Ypp~~~~~--~~~g~~~HtD~~~lTll~qd~~~~GLqv~-~~g~W~~v~~~~~~~vvn~Gd~l~~~tng---- 76 (129)
+.||++||||++.++ ..+|+++|||+|+||||+|| +++||||+ ++|+|++|+|.||++|||+||+||+||||
T Consensus 150 ~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd-~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~Tng~~kS 228 (280)
T 3on7_A 150 TLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTA-NEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEASDGYFPS 228 (280)
T ss_dssp CEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECC-SCCCEEEECTTSCEEECCCCTTCEEEEECHHHHHHTTTSSCC
T ss_pred ceEEEEECCCCCCccccCcccccCCCCCCeEEEEEec-CCCCeEEEcCCCCEEECcCCCCEEEEEcChHHHHHhCCcccC
Confidence 789999999998654 57999999999999999996 68999999 48999999999999999999999999999
Q ss_pred cceeecCCC----CCCCceeEeeeeCC--eEEecCCcccCCCCCCCCccccHHHHhhc
Q 038619 77 INQWELPSA----SQERISISTFYKAR--YEEHPASSLISEETPALFRRVTVEEYLRG 128 (129)
Q Consensus 77 ~~HRV~~~~----~~~R~S~~~f~~p~--~~i~pl~~~~~~~~~~~y~~~~~~dyl~~ 128 (129)
++|||+.++ .++|||++||+.|+ ++|+| +++++||++.
T Consensus 229 ~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p--------------~ita~~~l~~ 272 (280)
T 3on7_A 229 TSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE--------------RYTADSYLME 272 (280)
T ss_dssp CCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS--------------SCBHHHHHHH
T ss_pred CCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC--------------CccHHHHHHH
Confidence 999999874 46899999999999 77763 5899999875
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=94.50 E-value=0.14 Score=38.80 Aligned_cols=78 Identities=19% Similarity=0.134 Sum_probs=54.2
Q ss_pred EEeeecCCCCCCCCccccccccCCC-----------CeeEEeeCCC----cce-eEEEeCCeeEEecCCCCeeEeecccc
Q 038619 6 LAMNPISQMGKPEKVIRLTPHSDGS-----------TLTILLQVCE----VEG-LQIKKDGKWTSVSPLRNAFIVNIGDM 69 (129)
Q Consensus 6 lrl~~Ypp~~~~~~~~g~~~HtD~~-----------~lTll~qd~~----~~G-Lqv~~~g~W~~v~~~~~~~vvn~Gd~ 69 (129)
+++++|.+- --..+|.|.. .+|+++.-++ .+| |.+.....=..|+|..|.+++.-.
T Consensus 101 ~~~~rY~~G------~~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~~~~V~P~~G~~v~F~s-- 172 (243)
T 3dkq_A 101 PLFNRYQGG------ETFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYGQQSIKLSAGSLVLYPS-- 172 (243)
T ss_dssp EEEEEECTT------CEEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTEEEEECCCTTCEEEEET--
T ss_pred ceEEEECCC------CeeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCCcEEEecCCCEEEEECC--
Confidence 778889772 2367777763 4566555322 233 666665445789999999998743
Q ss_pred eecccCCcceeecCCCCCCCceeEeeee
Q 038619 70 FEVLTISINQWELPSASQERISISTFYK 97 (129)
Q Consensus 70 l~~~tng~~HRV~~~~~~~R~S~~~f~~ 97 (129)
+.+|+|.......|++++.+++
T Consensus 173 ------~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 173 ------SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp ------TSEEEECCEEEECEEEEEEEEE
T ss_pred ------CCeEcCccccccCEEEEEEehh
Confidence 3699998766679999998875
No 8
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=93.70 E-value=0.22 Score=36.52 Aligned_cols=82 Identities=5% Similarity=-0.007 Sum_probs=55.6
Q ss_pred CceEEeeecCCCCCCCCccccccccCCC--------CeeEEeeCCCcceeEEEeC----------CeeEEecCCCCeeEe
Q 038619 3 LEPLAMNPISQMGKPEKVIRLTPHSDGS--------TLTILLQVCEVEGLQIKKD----------GKWTSVSPLRNAFIV 64 (129)
Q Consensus 3 ~~~lrl~~Ypp~~~~~~~~g~~~HtD~~--------~lTll~qd~~~~GLqv~~~----------g~W~~v~~~~~~~vv 64 (129)
+...-+|+|.+- .-++++|.|-. .++|-+. +..-+.+.+. +..+.+...+|+++|
T Consensus 99 ~n~~LvN~Y~~G-----~d~i~~H~D~~~~~~~~~~IasvSLG--~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~Gsllv 171 (204)
T 3s57_A 99 FNFVLINRYKDG-----SDHICEHRDDERELAPGSPIASVSFG--ASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLM 171 (204)
T ss_dssp CSEEEEEEESST-----TCCEEEECCCCTTBCTTCCEEEEEEE--SCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEE
T ss_pred CceeEEEEECCC-----CCcccceecChhhccCCCcEEEEECC--CceEEEEEEcCCCccccccCCceEEEECCCCCEEE
Confidence 456678999772 22688898872 2344333 1344555531 257888899999999
Q ss_pred ecccceecccCCcceeecCCC--CCCCceeEee
Q 038619 65 NIGDMFEVLTISINQWELPSA--SQERISISTF 95 (129)
Q Consensus 65 n~Gd~l~~~tng~~HRV~~~~--~~~R~S~~~f 95 (129)
.-|++=..| .|.|-... ...|+|+.|=
T Consensus 172 M~g~~q~~w----~H~Ip~~~~~~~~RislTFR 200 (204)
T 3s57_A 172 MNHPTNTHW----YHSLPVRKKVLAPRVNLTFR 200 (204)
T ss_dssp EETTHHHHE----EEEECCCTTCCSCEEEEEEE
T ss_pred ECchhhhee----EeeccccCCCCCCEEEEEee
Confidence 999988888 77776543 3689999883
No 9
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=93.68 E-value=0.22 Score=36.68 Aligned_cols=42 Identities=21% Similarity=0.164 Sum_probs=33.5
Q ss_pred CeeEEecCCCCeeEeecccceecccCCcceeecCCCC-CCCceeEeeeeCC
Q 038619 50 GKWTSVSPLRNAFIVNIGDMFEVLTISINQWELPSAS-QERISISTFYKAR 99 (129)
Q Consensus 50 g~W~~v~~~~~~~vvn~Gd~l~~~tng~~HRV~~~~~-~~R~S~~~f~~p~ 99 (129)
..+..+.|.+|.+|++-+. + .|.|..... ++|+|++|.+.+.
T Consensus 166 ~~~~~i~P~~G~lvlFpS~----l----~H~V~p~~~~~~RiSIsFN~~~~ 208 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESW----L----RHEVPMNMAEEDRISVSFNYAWG 208 (216)
T ss_dssp CSEEEECCCTTEEEEEETT----S----CEEECCCCSSSCEEEEEEEEEC-
T ss_pred CCeeEecCCCCeEEEECCC----C----EEeccCCCCCCCEEEEEEEeecC
Confidence 3567889999999998764 3 899998654 6899999998775
No 10
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=93.62 E-value=0.3 Score=36.72 Aligned_cols=81 Identities=16% Similarity=0.209 Sum_probs=56.6
Q ss_pred EEeeecCCCCCCCCccccccccCCC-----CeeEEeeCCC------cce-eEEEeCC--eeEEecCCCCeeEeeccccee
Q 038619 6 LAMNPISQMGKPEKVIRLTPHSDGS-----TLTILLQVCE------VEG-LQIKKDG--KWTSVSPLRNAFIVNIGDMFE 71 (129)
Q Consensus 6 lrl~~Ypp~~~~~~~~g~~~HtD~~-----~lTll~qd~~------~~G-Lqv~~~g--~W~~v~~~~~~~vvn~Gd~l~ 71 (129)
+.+.+|++ ..-....|.|.. .+|+++--+. .+| |+++.++ ....|.|..|.++++-.
T Consensus 119 ~~~~~Y~~-----~G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s---- 189 (247)
T 2hbt_A 119 AMVACYPG-----NGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWS---- 189 (247)
T ss_dssp EEEEEECS-----SSCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEEC----
T ss_pred EEEEEecC-----CCCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEec----
Confidence 56778875 123467788872 5777765322 134 7788654 67899999999999864
Q ss_pred cccCC-cceeecCCCCCCCceeEeeeeCC
Q 038619 72 VLTIS-INQWELPSASQERISISTFYKAR 99 (129)
Q Consensus 72 ~~tng-~~HRV~~~~~~~R~S~~~f~~p~ 99 (129)
+. ..|.|.. ..+.|+|++.+++-.
T Consensus 190 ---~~~~~H~V~p-~~~~R~sit~W~~~~ 214 (247)
T 2hbt_A 190 ---DRRNPHEVQP-AYATRYAITVWYFDA 214 (247)
T ss_dssp ---STTCCEEECC-BSSCEEEEEEEEEEH
T ss_pred ---CCCceeeecc-CCCEEEEEEEEEcCC
Confidence 33 6999986 457999999876654
No 11
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=93.57 E-value=0.33 Score=35.86 Aligned_cols=79 Identities=13% Similarity=0.104 Sum_probs=53.9
Q ss_pred ceEEeeecCCCCCCCCccccccccCC-----C--CeeEEeeCCCcceeEEEe---CCeeEEecCCCCeeEeecccceecc
Q 038619 4 EPLAMNPISQMGKPEKVIRLTPHSDG-----S--TLTILLQVCEVEGLQIKK---DGKWTSVSPLRNAFIVNIGDMFEVL 73 (129)
Q Consensus 4 ~~lrl~~Ypp~~~~~~~~g~~~HtD~-----~--~lTll~qd~~~~GLqv~~---~g~W~~v~~~~~~~vvn~Gd~l~~~ 73 (129)
...-+|+|.+ +. ++++|.|. + ++|+-+. ...-+.+.+ ++....+.-.+|+++|.-|+.- .|
T Consensus 105 n~~LvN~Y~~-----G~-~i~~H~D~~e~~~~~pI~svSLG--~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r-~~ 175 (211)
T 3i3q_A 105 DACLINRYAP-----GA-KLSLHQDKDEPDLRAPIVSVSLG--LPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESR-LF 175 (211)
T ss_dssp CEEEEEEECT-----TC-CEEEECCCCCSCTTSCEEEEEEE--SCEEEEECCSSTTSCCEEEEECTTCEEEECGGGT-TC
T ss_pred CEEEEEEEcC-----CC-CcccccCCCccccCCCEEEEECC--CCeEEEEecccCCCceEEEECCCCCEEEECchHH-ce
Confidence 5677888876 23 79999993 1 3344344 134455543 3678899999999999999884 46
Q ss_pred cCCcceeecCCCC-------CCCceeEee
Q 038619 74 TISINQWELPSAS-------QERISISTF 95 (129)
Q Consensus 74 tng~~HRV~~~~~-------~~R~S~~~f 95 (129)
.|.|..... ..|+|+.|=
T Consensus 176 ----~H~I~~~~~~~~p~~~~~RIsLTFR 200 (211)
T 3i3q_A 176 ----YHGIQPLKAGFHPLTIDCRYNLTFR 200 (211)
T ss_dssp ----CEEECCCCCCCBTTTBTCEEEEEEE
T ss_pred ----EeccCcccCCcCCCCCCCEEEEEee
Confidence 677765432 369999884
No 12
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=93.52 E-value=0.34 Score=36.24 Aligned_cols=83 Identities=10% Similarity=0.083 Sum_probs=56.5
Q ss_pred CceEEeeecCCCCCCCCccccccccCC--------CCeeEEeeCCCcceeEEEe-C----------CeeEEecCCCCeeE
Q 038619 3 LEPLAMNPISQMGKPEKVIRLTPHSDG--------STLTILLQVCEVEGLQIKK-D----------GKWTSVSPLRNAFI 63 (129)
Q Consensus 3 ~~~lrl~~Ypp~~~~~~~~g~~~HtD~--------~~lTll~qd~~~~GLqv~~-~----------g~W~~v~~~~~~~v 63 (129)
...+.+|+|++- .-++++|.|- .++||=+.. ..=+.+.. . +..+.+.-.+|+++
T Consensus 125 ~n~~LvN~Y~~G-----~d~i~~H~D~~~~~~~~~~IaslSLG~--~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsll 197 (238)
T 2iuw_A 125 FNSLLCNLYRNE-----KDSVDWHSDDEPSLGRCPIIASLSFGA--TRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLL 197 (238)
T ss_dssp CCEEEEEEECST-----TCCEEEECCCCGGGCSSCCEEEEEEES--CEEEEEEECCC--------CCCEEEEEECTTCEE
T ss_pred CCEEEEEEECCC-----CCceeCCcCChhhcCCCCcEEEEECCC--CEEEEEeccCCccccCcccCCceEEEEcCCCCEE
Confidence 456778999772 2268889885 233444431 23355543 1 36889999999999
Q ss_pred eecccceecccCCcceeecCC--CCCCCceeEeee
Q 038619 64 VNIGDMFEVLTISINQWELPS--ASQERISISTFY 96 (129)
Q Consensus 64 vn~Gd~l~~~tng~~HRV~~~--~~~~R~S~~~f~ 96 (129)
|.-|+.=..| .|.|... ....|+|+.|=.
T Consensus 198 vM~G~~r~~w----~H~I~~~~~~~~~RIsLTfR~ 228 (238)
T 2iuw_A 198 IMEGATQADW----QHRVPKEYHSREPRVNLTFRT 228 (238)
T ss_dssp EEEETHHHHE----EEEECCCSSCCCCEEEEEEEC
T ss_pred EEChhhhCcc----EecCCCcCCCCCCEEEEEeee
Confidence 9999988888 6766543 246899999843
No 13
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=88.71 E-value=0.73 Score=36.50 Aligned_cols=66 Identities=18% Similarity=0.201 Sum_probs=47.6
Q ss_pred CceEEeeecCCCCCCCCccccccccCCC------CeeEEeeCCCcceeEEEe-CCeeEEecCCCCeeEeecccceecccC
Q 038619 3 LEPLAMNPISQMGKPEKVIRLTPHSDGS------TLTILLQVCEVEGLQIKK-DGKWTSVSPLRNAFIVNIGDMFEVLTI 75 (129)
Q Consensus 3 ~~~lrl~~Ypp~~~~~~~~g~~~HtD~~------~lTll~qd~~~~GLqv~~-~g~W~~v~~~~~~~vvn~Gd~l~~~tn 75 (129)
...+-+|.|.+ .-++++|.|.. ++|+=+. ...=+.+.. ++.++.+.-.+++++|.-|+.=..|..
T Consensus 197 ~n~~lvN~Y~~------G~~I~~H~D~~~~~~~~I~slSLG--~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~H 268 (345)
T 3tht_A 197 PDQMTINQYEP------GQGIPAHIDTHSAFEDEIVSLSLG--SEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTH 268 (345)
T ss_dssp CSEEEEEEECT------TCCEEEECCCTTTBCSCEEEEEES--SCEEEEEECTTSCEEEEEECTTEEEEECTHHHHTSEE
T ss_pred CCEEEEEEecC------CCCEeeccCCchhcCCeEEEEECC--CceeEEEccCCCceEEEEcCCCcEEEEChHHhhceEc
Confidence 35667888876 22799999984 3333333 133455554 577999999999999999999999977
Q ss_pred C
Q 038619 76 S 76 (129)
Q Consensus 76 g 76 (129)
|
T Consensus 269 ~ 269 (345)
T 3tht_A 269 G 269 (345)
T ss_dssp E
T ss_pred c
Confidence 7
No 14
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=88.39 E-value=0.57 Score=34.20 Aligned_cols=85 Identities=14% Similarity=0.171 Sum_probs=53.6
Q ss_pred eEEeeecCCCCCCCCccccccccCCC--------------CeeEEee--CCCcce-eEEEeCC-------------eeEE
Q 038619 5 PLAMNPISQMGKPEKVIRLTPHSDGS--------------TLTILLQ--VCEVEG-LQIKKDG-------------KWTS 54 (129)
Q Consensus 5 ~lrl~~Ypp~~~~~~~~g~~~HtD~~--------------~lTll~q--d~~~~G-Lqv~~~g-------------~W~~ 54 (129)
.+++++|.+- -...+|.|.. .+|+++- |...+| +.+...+ .-+.
T Consensus 99 ~~qv~rY~~G------~~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~c~~~~~~ 172 (224)
T 2jig_A 99 GLQVLHYHDG------QKYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQKVTGDGWSECAKRGLA 172 (224)
T ss_dssp CCEEEEEETT------CCEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSSSCCCSTTSCTTGGGSEE
T ss_pred ceEEEecCCC------ccccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCcccccccccccccccCceE
Confidence 4778888762 2356777741 4677644 333344 4332211 2478
Q ss_pred ecCCCCeeEeecccceecccCC-----cceeecCCCCCCCceeEeeeeCC
Q 038619 55 VSPLRNAFIVNIGDMFEVLTIS-----INQWELPSASQERISISTFYKAR 99 (129)
Q Consensus 55 v~~~~~~~vvn~Gd~l~~~tng-----~~HRV~~~~~~~R~S~~~f~~p~ 99 (129)
|.|..|.+++.-- ...+| ++|+|.......|+++..+++-.
T Consensus 173 V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~ 218 (224)
T 2jig_A 173 VKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHVA 218 (224)
T ss_dssp ECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEESS
T ss_pred EecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEcC
Confidence 9999988887653 22334 89999876567899998887643
No 15
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=86.75 E-value=1.5 Score=32.41 Aligned_cols=84 Identities=14% Similarity=0.041 Sum_probs=53.2
Q ss_pred ceEEeeecCCCCCCCCccccccccCCC-----------CeeEEeeC--CCcceeEEEeCCeeEEecCCCCeeEeecccce
Q 038619 4 EPLAMNPISQMGKPEKVIRLTPHSDGS-----------TLTILLQV--CEVEGLQIKKDGKWTSVSPLRNAFIVNIGDMF 70 (129)
Q Consensus 4 ~~lrl~~Ypp~~~~~~~~g~~~HtD~~-----------~lTll~qd--~~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~l 70 (129)
..+++.+|.+-. ...+|.|.. .+|+++-- ...+|=-+..+ .-+.|.|..|.+++.-.
T Consensus 111 E~lqv~~Y~~G~------~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~-~~~~V~P~~G~al~f~~--- 180 (216)
T 3itq_A 111 EGLHILNYEVDQ------QYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFFPK-LNLSVHPRKGMAVYFEY--- 180 (216)
T ss_dssp CCCEEEEECBTC------CEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEETT-TTEEECCCTTCEEEEEC---
T ss_pred cceeEEEeCCCC------ccccccCCCcCCCcccCCceEEEEEEecccCCcCceeEecC-CCCEEecCCCeEEEEec---
Confidence 357888887622 256777763 36666553 22334223322 12678899998888654
Q ss_pred ecccCC-----cceeecCCCCCCCceeEeeeeC
Q 038619 71 EVLTIS-----INQWELPSASQERISISTFYKA 98 (129)
Q Consensus 71 ~~~tng-----~~HRV~~~~~~~R~S~~~f~~p 98 (129)
...+| ++|++.......|+++..+++-
T Consensus 181 -~~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~~ 212 (216)
T 3itq_A 181 -FYQDQSLNELTLHGGAPVTKGEKWIATQWVRR 212 (216)
T ss_dssp -CCSSHHHHHTTCEEECCEEESCEEEEEEEEES
T ss_pred -cCCCCCCCCccccccceeccccEEEEEeeEec
Confidence 22344 8999987666789999888753
No 16
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=76.33 E-value=5.4 Score=30.86 Aligned_cols=65 Identities=9% Similarity=0.114 Sum_probs=40.0
Q ss_pred ccccccCC--------CCeeEEeeCCCcceeEEEeCCeeEEecCCCCeeEeecccceecccCCcceeecCCCCCCCceeE
Q 038619 22 RLTPHSDG--------STLTILLQVCEVEGLQIKKDGKWTSVSPLRNAFIVNIGDMFEVLTISINQWELPSASQERISIS 93 (129)
Q Consensus 22 g~~~HtD~--------~~lTll~qd~~~~GLqv~~~g~W~~v~~~~~~~vvn~Gd~l~~~tng~~HRV~~~~~~~R~S~~ 93 (129)
.+.+|.|. +.+.++..-.+.+|..+..+|+-+..++ ..+..+|.. ..|+|.+.++.+|+.+.
T Consensus 103 ~I~~HrD~~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~~~~m~~-GE~w~~d~~---------~~H~v~N~g~~~RIhLv 172 (290)
T 1e5r_A 103 IVIPHRDFVELDREVDRYFRTFMVLEDSPLAFHSNEDTVIHMRP-GEIWFLDAA---------TVHSAVNFSEISRQSLC 172 (290)
T ss_dssp EEEEECCC--------CBCCEEEECSCCTTEEEEETTEEECCCT-TEEEECCTT---------SCEEEEESSSSCCCEEE
T ss_pred EeeCccCccccccccCCceEEEeeEecCCCcEEEECCEEEecCC-CCEEEEcCC---------CeeEEEcCCCCCeEEEE
Confidence 47888888 3345544433456666666665544433 111221111 79999999999999988
Q ss_pred eee
Q 038619 94 TFY 96 (129)
Q Consensus 94 ~f~ 96 (129)
+=+
T Consensus 173 ~D~ 175 (290)
T 1e5r_A 173 VDF 175 (290)
T ss_dssp EEE
T ss_pred EEe
Confidence 755
No 17
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=69.17 E-value=11 Score=28.14 Aligned_cols=20 Identities=30% Similarity=0.395 Sum_probs=16.2
Q ss_pred CCccccccccCCCCeeEEee
Q 038619 18 EKVIRLTPHSDGSTLTILLQ 37 (129)
Q Consensus 18 ~~~~g~~~HtD~~~lTll~q 37 (129)
...++.-+|.+...+|.+++
T Consensus 51 g~gf~~HPHrg~EtvTyvl~ 70 (242)
T 1tq5_A 51 GQGFGTHPHKDMEILTYVLE 70 (242)
T ss_dssp TCEEEEEEECSCEEEEEEEE
T ss_pred CCcCCCcCCCCcEEEEEEEE
Confidence 34567778899999999988
No 18
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=67.03 E-value=4.7 Score=30.71 Aligned_cols=31 Identities=16% Similarity=0.211 Sum_probs=21.4
Q ss_pred eEEeeecCCCCCCCCccccccccCCCCeeEEee
Q 038619 5 PLAMNPISQMGKPEKVIRLTPHSDGSTLTILLQ 37 (129)
Q Consensus 5 ~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTll~q 37 (129)
.++++...+ .+...++..+|.+..++|++++
T Consensus 38 pf~~ld~~~--~~~~gf~~HPHrg~EtVTyvl~ 68 (277)
T 2p17_A 38 PFLLLMEDI--FERGTFDVHPHRGIETVTYVIS 68 (277)
T ss_dssp TEEEEEEEE--ECTTCCCCEEECSEEEEEEEEE
T ss_pred CEEEEecCC--CCCCCCCCCCCCCcEEEEEEEE
Confidence 345544422 3344677889999999999998
No 19
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=53.83 E-value=35 Score=25.55 Aligned_cols=20 Identities=10% Similarity=0.162 Sum_probs=15.8
Q ss_pred CCccccccccCCCCeeEEee
Q 038619 18 EKVIRLTPHSDGSTLTILLQ 37 (129)
Q Consensus 18 ~~~~g~~~HtD~~~lTll~q 37 (129)
...++.-+|.+...+|.+++
T Consensus 74 g~gf~~HPHrg~EtvTyvl~ 93 (256)
T 2vec_A 74 GAAFQPRTYPKVDILNVILD 93 (256)
T ss_dssp TCEEEEECCSSEEEEEEEEE
T ss_pred CCccCCcCCCCcEEEEEEEe
Confidence 34567778888889999888
No 20
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=40.04 E-value=30 Score=23.21 Aligned_cols=22 Identities=5% Similarity=-0.028 Sum_probs=18.7
Q ss_pred cceeecCCCCCCCceeEeeeeCC
Q 038619 77 INQWELPSASQERISISTFYKAR 99 (129)
Q Consensus 77 ~~HRV~~~~~~~R~S~~~f~~p~ 99 (129)
..|||. .++.-|+-+-|++.|.
T Consensus 80 ~wHrVe-~sdD~~f~leFyc~~~ 101 (119)
T 3dl3_A 80 YWHRIE-LSDDAQFNINFWSDQD 101 (119)
T ss_dssp CEEEEE-ECTTCEEEEEEEECC-
T ss_pred ceEEEE-ECCCeEEEEEEEECch
Confidence 899999 6677899999999887
No 21
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=38.06 E-value=1e+02 Score=22.12 Aligned_cols=37 Identities=8% Similarity=0.044 Sum_probs=27.3
Q ss_pred EeecccceecccCC--------cceeecCCCCCCCceeEe-eeeCC
Q 038619 63 IVNIGDMFEVLTIS--------INQWELPSASQERISIST-FYKAR 99 (129)
Q Consensus 63 vvn~Gd~l~~~tng--------~~HRV~~~~~~~R~S~~~-f~~p~ 99 (129)
.+.+|+.-..|..| -.|.|...++++|+-+.+ |.+|.
T Consensus 140 ~i~V~~~~~~w~eGe~~~fDds~~Hev~N~~d~~RvvL~~D~~rPd 185 (197)
T 3rcq_A 140 KIRCANETKTWEEGKVLIFDDSFEHEVWQDASSFRLIFIVDVWHPE 185 (197)
T ss_dssp EEEETTEEECCCBTCEEEECTTSCEEEEECSSSCEEEEEEEEECTT
T ss_pred EEEECCEEEEeeCCcEEEEcCCeEEEEEECCCCCEEEEEEeeeCCC
Confidence 34567777788888 899999988888887655 44444
No 22
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=34.57 E-value=46 Score=25.32 Aligned_cols=19 Identities=26% Similarity=0.212 Sum_probs=15.8
Q ss_pred CccccccccCCCCeeEEe-e
Q 038619 19 KVIRLTPHSDGSTLTILL-Q 37 (129)
Q Consensus 19 ~~~g~~~HtD~~~lTll~-q 37 (129)
..++..+|.+..++|+++ +
T Consensus 51 ~Gf~~HPHrg~EtVTyvl~~ 70 (290)
T 1j1l_A 51 GGFPDHPHRGFETVSYLLEG 70 (290)
T ss_dssp CBEEEEEEBSEEEEEEECSS
T ss_pred CCCCCCCCCCeEEEEEECcc
Confidence 357788899999999999 5
No 23
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=28.67 E-value=1.9e+02 Score=24.76 Aligned_cols=81 Identities=16% Similarity=0.211 Sum_probs=50.8
Q ss_pred EEeeecCCCCCCCCccccccccCC-C--CeeEEeeCCC---------cceeEEEeC--------CeeEEecCCCCeeEee
Q 038619 6 LAMNPISQMGKPEKVIRLTPHSDG-S--TLTILLQVCE---------VEGLQIKKD--------GKWTSVSPLRNAFIVN 65 (129)
Q Consensus 6 lrl~~Ypp~~~~~~~~g~~~HtD~-~--~lTll~qd~~---------~~GLqv~~~--------g~W~~v~~~~~~~vvn 65 (129)
+-++.|++ +-.+..|.|. + .+|+++--+. .+.|+++.. .....+.|..|.++++
T Consensus 126 ~~~a~Y~~------G~fL~~H~D~~~~RrvS~VLYLN~pd~~W~~e~GGeL~Lyd~d~~~~P~~d~~~~I~P~fNrLV~F 199 (633)
T 3kt7_A 126 MSINTYTK------GCHLLTHDDVIGSRRISFILYLPDPDRKWKSHYGGGLRLFPSILPNVPHSDPSAKLVPQFNQIAFF 199 (633)
T ss_dssp EEEEEECT------TCEEEEECCCCTTEEEEEEEECSCTTSCCCGGGBCCEEECCEEETTEECSSCSEEECCCTTEEEEE
T ss_pred EEEEEeCC------CCeeeecCCCCCCeEEEEEEEcCCCCCCCCccCCceEEEecCCCcCCCCCCceEEEecCCCeEEEE
Confidence 44566655 3347789995 2 3666553221 233888752 2467788999999887
Q ss_pred cccceecccC-C-cceeecCC-CCCCCceeEeeeeCC
Q 038619 66 IGDMFEVLTI-S-INQWELPS-ASQERISISTFYKAR 99 (129)
Q Consensus 66 ~Gd~l~~~tn-g-~~HRV~~~-~~~~R~S~~~f~~p~ 99 (129)
.- . + ..|.|... .++.|+||+-.++-+
T Consensus 200 ~v-------sp~~S~H~V~eV~~~~~RlSItGWF~~p 229 (633)
T 3kt7_A 200 KV-------LPGFSFHDXEEVKVDKHRLSIQGWYHIP 229 (633)
T ss_dssp EC-------CTTTCCEEECCBCSSCCEEEEEEEEECC
T ss_pred Ec-------CCCCCcCCCCccCCCCCEEEEEEEeccC
Confidence 53 3 3 67876332 278999999776644
No 24
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=26.02 E-value=51 Score=16.27 Aligned_cols=13 Identities=31% Similarity=0.654 Sum_probs=9.7
Q ss_pred eEEEeCCeeEEec
Q 038619 44 LQIKKDGKWTSVS 56 (129)
Q Consensus 44 Lqv~~~g~W~~v~ 56 (129)
..|.++|.|+...
T Consensus 12 ~Yvr~dg~WV~l~ 24 (27)
T 2ww6_A 12 AYVRKFGEWVLLS 24 (27)
T ss_dssp EEEEETTEEEEGG
T ss_pred eeEEEcCeEEEcc
Confidence 4567899999753
No 25
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=23.78 E-value=70 Score=20.06 Aligned_cols=22 Identities=5% Similarity=-0.049 Sum_probs=13.0
Q ss_pred cceeecCCCCC-CCceeEeeeeC
Q 038619 77 INQWELPSASQ-ERISISTFYKA 98 (129)
Q Consensus 77 ~~HRV~~~~~~-~R~S~~~f~~p 98 (129)
..||+...+.. ..+=+++|+.|
T Consensus 89 ~~H~~~n~~~~~~~~~l~v~~~~ 111 (112)
T 2opk_A 89 CRHRVAWTDGGEPTVWLAVHCDA 111 (112)
T ss_dssp CCEEEEEECSSSCEEEEEEEECC
T ss_pred CcEEEEeCCCCCCEEEEEEEEeC
Confidence 88999876543 33335555543
No 26
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=22.93 E-value=3.2e+02 Score=22.48 Aligned_cols=79 Identities=11% Similarity=0.087 Sum_probs=41.5
Q ss_pred CCCccccccccCCCCeeEEeeCCCcceeEEEeCCee---------EEecC-----CCCeeEeecccceecccCCcceeec
Q 038619 17 PEKVIRLTPHSDGSTLTILLQVCEVEGLQIKKDGKW---------TSVSP-----LRNAFIVNIGDMFEVLTISINQWEL 82 (129)
Q Consensus 17 ~~~~~g~~~HtD~~~lTll~qd~~~~GLqv~~~g~W---------~~v~~-----~~~~~vvn~Gd~l~~~tng~~HRV~ 82 (129)
+.+..|+++|.|.--+ +++|-.+..--+++..... ..+.. ..-.+++..||+| .+--|.+|.|.
T Consensus 172 p~Gs~g~~pH~D~~Dv-FllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvL-YiP~g~~H~~~ 249 (489)
T 4diq_A 172 PPNSQGFAPHYDDIEA-FVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLL-YFPRGFIHQAE 249 (489)
T ss_dssp CSSBCCSCCBCCSSEE-EEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEE-EECTTCEEEEE
T ss_pred CCCcccccCccCCcce-EEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEE-EECCCCceEEE
Confidence 3456789999998643 5555212222333321110 00000 0013778888887 45566899999
Q ss_pred CCCCCCCceeEeeee
Q 038619 83 PSASQERISISTFYK 97 (129)
Q Consensus 83 ~~~~~~R~S~~~f~~ 97 (129)
...+..-+++.+-..
T Consensus 250 s~~~~~SlhlTi~~~ 264 (489)
T 4diq_A 250 CQDGVHSLHLTLSTY 264 (489)
T ss_dssp BCSSCCEEEEEEEEC
T ss_pred ecCCCceEEEeeccc
Confidence 875443444444443
Done!