Query         038621
Match_columns 477
No_of_seqs    173 out of 2168
Neff          10.9
Searched_HMMs 46136
Date          Fri Mar 29 12:54:35 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038621.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038621hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 PLN02196 abscisic acid 8'-hydr 100.0 2.8E-80   6E-85  603.6  46.2  462    1-465     1-462 (463)
  2 KOG0156 Cytochrome P450 CYP2 s 100.0   1E-78 2.3E-83  579.5  43.9  404   33-442    24-463 (489)
  3 PLN02500 cytochrome P450 90B1  100.0 2.3E-77 5.1E-82  588.3  45.8  430   31-464    34-488 (490)
  4 PLN02774 brassinosteroid-6-oxi 100.0 1.2E-76 2.5E-81  578.7  44.9  426   34-464    30-462 (463)
  5 KOG0158 Cytochrome P450 CYP3/C 100.0   8E-77 1.7E-81  557.5  41.9  430   31-466    27-499 (499)
  6 PLN03141 3-epi-6-deoxocathaste 100.0 6.3E-75 1.4E-79  565.3  43.7  434   30-467     2-451 (452)
  7 PLN02302 ent-kaurenoic acid ox 100.0 1.3E-73 2.9E-78  564.2  47.8  436   29-467    36-489 (490)
  8 PLN02971 tryptophan N-hydroxyl 100.0 1.1E-73 2.3E-78  566.8  46.7  427   32-465    54-533 (543)
  9 PLN02290 cytokinin trans-hydro 100.0 3.4E-74 7.5E-79  570.0  41.3  426   32-467    39-516 (516)
 10 PLN00168 Cytochrome P450; Prov 100.0 2.8E-73 6.1E-78  562.4  46.3  462    1-467     1-518 (519)
 11 PLN02183 ferulate 5-hydroxylas 100.0 3.1E-73 6.6E-78  561.7  45.7  409   26-442    27-482 (516)
 12 PLN02987 Cytochrome P450, fami 100.0 1.1E-72 2.5E-77  548.1  46.4  433   29-466    24-469 (472)
 13 PTZ00404 cytochrome P450; Prov 100.0 2.6E-73 5.6E-78  559.4  41.7  426   31-465    25-482 (482)
 14 PLN02687 flavonoid 3'-monooxyg 100.0 9.3E-73   2E-77  558.4  44.8  429   31-466    30-509 (517)
 15 KOG0157 Cytochrome P450 CYP4/C 100.0 4.5E-74 9.9E-79  559.4  34.4  428   33-466    33-496 (497)
 16 PLN03234 cytochrome P450 83B1; 100.0 3.4E-72 7.4E-77  553.9  44.6  428   31-465    24-498 (499)
 17 PLN00110 flavonoid 3',5'-hydro 100.0 4.7E-72   1E-76  550.0  45.1  453    5-466     3-497 (504)
 18 PLN02394 trans-cinnamate 4-mon 100.0 3.2E-71 6.9E-76  547.5  44.5  429   32-466    27-502 (503)
 19 PLN03112 cytochrome P450 famil 100.0 4.9E-71 1.1E-75  547.2  45.6  453    8-467     5-509 (514)
 20 PLN02966 cytochrome P450 83A1  100.0 4.9E-70 1.1E-74  537.5  44.5  414   26-443    20-471 (502)
 21 PLN02169 fatty acid (omega-1)- 100.0 9.1E-70   2E-74  532.8  44.7  418   35-465    31-499 (500)
 22 PLN03018 homomethionine N-hydr 100.0 2.3E-69 4.9E-74  531.8  47.5  459    1-465     2-523 (534)
 23 PLN02655 ent-kaurene oxidase   100.0   9E-70 1.9E-74  530.7  42.7  423   37-466     1-464 (466)
 24 KOG0684 Cytochrome P450 [Secon 100.0   2E-69 4.3E-74  482.9  38.1  426   35-466    31-485 (486)
 25 PLN03195 fatty acid omega-hydr 100.0 2.6E-69 5.6E-74  534.7  42.4  428   36-466    31-516 (516)
 26 PLN02738 carotene beta-ring hy 100.0 4.5E-69 9.8E-74  535.1  41.5  415   46-468   142-597 (633)
 27 PF00067 p450:  Cytochrome P450 100.0 6.2E-70 1.4E-74  536.7  33.5  419   37-462     1-463 (463)
 28 KOG0159 Cytochrome P450 CYP11/ 100.0 4.2E-68 9.2E-73  486.7  37.0  429   32-466    47-518 (519)
 29 PLN02936 epsilon-ring hydroxyl 100.0 1.6E-67 3.5E-72  517.0  39.4  428   36-471    13-487 (489)
 30 PLN02426 cytochrome P450, fami 100.0 2.6E-65 5.5E-70  500.5  42.9  413   43-466    49-500 (502)
 31 PLN02648 allene oxide synthase 100.0   3E-61 6.5E-66  464.4  24.9  391   32-443    14-463 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 3.1E-55 6.7E-60  418.0  34.0  375   57-465    24-410 (411)
 33 PF12508 DUF3714:  Protein of u  66.3     2.4 5.2E-05   35.9   0.6   44  328-372    51-94  (200)
 34 PF08492 SRP72:  SRP72 RNA-bind  64.3     5.8 0.00013   25.9   1.9    8  391-398    44-51  (59)
 35 PF02468 PsbN:  Photosystem II   54.0      23 0.00049   21.4   3.0   35    1-35      1-35  (43)
 36 PF05952 ComX:  Bacillus compet  53.1      14  0.0003   24.0   2.2   19  286-304     4-22  (57)
 37 PHA03049 IMV membrane protein;  51.2      49  0.0011   22.0   4.4   37   12-48      8-44  (68)
 38 PF12554 MOZART1:  Mitotic-spin  48.4      58  0.0013   20.3   4.3   42  264-305     6-47  (48)
 39 TIGR03779 Bac_Flav_CT_M Bacter  46.5     6.5 0.00014   37.3  -0.0   44  329-373   255-298 (410)
 40 PF05961 Chordopox_A13L:  Chord  40.4      89  0.0019   21.0   4.4   19   11-29      7-25  (68)
 41 COG1742 Uncharacterized conser  38.7      22 0.00049   26.1   1.7   64    8-74      7-70  (109)
 42 PF15102 TMEM154:  TMEM154 prot  36.7      22 0.00047   28.2   1.5   13    6-18     60-72  (146)
 43 PF11138 DUF2911:  Protein of u  31.7      57  0.0012   26.1   3.1   42  352-394    51-99  (145)
 44 PF13625 Helicase_C_3:  Helicas  31.6      84  0.0018   24.5   4.1   40   57-98     76-115 (129)
 45 PRK02237 hypothetical protein;  31.3      21 0.00045   26.6   0.6   66    5-73      5-70  (109)
 46 PF13893 RRM_5:  RNA recognitio  30.5 1.4E+02  0.0031   18.7   4.8   34   62-95      2-39  (56)
 47 KOG0114 Predicted RNA-binding   30.4 2.2E+02  0.0047   21.3   5.5   63   33-98     10-78  (124)
 48 PF02694 UPF0060:  Uncharacteri  29.9      37 0.00081   25.3   1.7   64    6-73      5-68  (107)
 49 PF09201 SRX:  SRX;  InterPro:   28.5      45 0.00097   26.1   2.0   24  412-435    18-41  (148)
 50 PF14483 Cut8_M:  Cut8 dimerisa  28.3      91   0.002   18.3   2.8   17  287-303    18-35  (38)
 51 PF10717 ODV-E18:  Occlusion-de  28.0 1.5E+02  0.0032   20.9   4.2   12   11-22     31-42  (85)
 52 PRK06789 flagellar motor switc  26.4      76  0.0016   22.0   2.6   40  334-373    20-62  (74)
 53 PF14459 Prok-E2_C:  Prokaryoti  25.9      77  0.0017   23.5   2.7   25  400-424   103-127 (131)
 54 PF01102 Glycophorin_A:  Glycop  25.6      67  0.0014   24.8   2.5    8    8-15     68-75  (122)
 55 KOG3506 40S ribosomal protein   25.4      33 0.00071   21.8   0.6   10  406-415    13-22  (56)
 56 PHA02681 ORF089 virion membran  24.5   2E+02  0.0044   20.2   4.3    9    1-9       1-9   (92)
 57 COG0851 MinE Septum formation   22.0 2.6E+02  0.0056   20.1   4.6   34  279-312    13-53  (88)
 58 KOG2376 Signal recognition par  21.9      60  0.0013   32.4   1.9   37  380-416   571-607 (652)
 59 KOG3653 Transforming growth fa  21.6 4.7E+02    0.01   25.8   7.5   48   56-103   210-258 (534)
 60 PF07849 DUF1641:  Protein of u  20.8 1.2E+02  0.0027   18.2   2.5   20  284-303    12-31  (42)

No 1  
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=2.8e-80  Score=603.63  Aligned_cols=462  Identities=82%  Similarity=1.326  Sum_probs=397.2

Q ss_pred             CCchhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCccccccccchhccccCchHHHHHHHHhhCCeEEEeecCcc
Q 038621            1 MDFTFLFLLPFASICFILCFYLFLKFISSNGRNLPLPPGTLGWPYIGETFELYSQNPNVFFASKVKRYGSIFKTHILGCP   80 (477)
Q Consensus         1 m~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~~~~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~yG~i~~i~~~~~~   80 (477)
                      |+++.++.+.+++.++++++.++..+.....++.++||||+++|++||++.+..++++.++.+++++||++|++++++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~   80 (463)
T PLN02196          1 MDFSALFLTLFAGALFLCLLRFLAGFRRSSSTKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCP   80 (463)
T ss_pred             CchHhhhhHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCc
Confidence            78888888766665555555555555555667789999999999999998865678999999999999999999999999


Q ss_pred             EEEEcCHHHHHHHHhhCCcccccCchhhhhhhhcCCceeecCChhHHHhHHHHHhcCCHHHHHhhHHHHHHHHHHHHHHh
Q 038621           81 CVMISSPEAAKFVLVTRAHLFKPTFPASKERMIGKQAIFFHQGDYHIKLRKLVLRAFMPEAIKNIIPDIECIAKDSLQSW  160 (477)
Q Consensus        81 ~vvv~~~~~~~~il~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~  160 (477)
                      +|+++||+++++++.++...|+..........+|..++++.+|+.|+++|+++++.|++++++.+.+.+.+.++++++.|
T Consensus        81 ~v~v~~p~~~~~vl~~~~~~~~~~~~~~~~~~~g~~~l~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~i~~~~~~~~~~~  160 (463)
T PLN02196         81 CVMISSPEAAKFVLVTKSHLFKPTFPASKERMLGKQAIFFHQGDYHAKLRKLVLRAFMPDAIRNMVPDIESIAQESLNSW  160 (463)
T ss_pred             eEEEcCHHHHHHHHhCCCCcccccCchHHHHHcCcccccccCcHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHcC
Confidence            99999999999999887776654333333445665688888999999999999999999999999999999999999999


Q ss_pred             cCCcccHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHHhhcccccCccCCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 038621          161 QGRLINTYQEMKIYTFNVALLSIFGKDEVLYREDLKRCYYILEKGYNSMPINLPGTLFHKSMKARKELAQIVAKIISTRR  240 (477)
Q Consensus       161 ~~~~v~~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~  240 (477)
                      .++.+|+.++++.+++++++.++||.+.......+.+.+..+...+..+|..+|....++..++++.+.+++.+.+++++
T Consensus       161 ~~~~v~~~~~~~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~i~~~~  240 (463)
T PLN02196        161 EGTQINTYQEMKTYTFNVALLSIFGKDEVLYREDLKRCYYILEKGYNSMPINLPGTLFHKSMKARKELAQILAKILSKRR  240 (463)
T ss_pred             CCCeEEeHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhcchhcccccCCCccchHHHHHHHHHHHHHHHHHHHHh
Confidence            87789999999999999999999998744333444444444444444455556665556777888999999999999887


Q ss_pred             hcccCCCChHHhhhhcCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcChhHHHHHHHHHHHHhhhcccCCcccc
Q 038621          241 QMKLDHNDLLGSFMGAKEGLTDEQIADNIIGVIFAARDTTASALTWIVKYLGENPGVLQAVTEEQEAIIKSKEKSGEEEV  320 (477)
Q Consensus       241 ~~~~~~~d~l~~ll~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~  320 (477)
                      +...+..|+++.++++.++++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++.+... .+  ..
T Consensus       241 ~~~~~~~d~l~~ll~~~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~-~~--~~  317 (463)
T PLN02196        241 QNGSSHNDLLGSFMGDKEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKE-EG--ES  317 (463)
T ss_pred             hcCCCcccHHHHHHhcCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccc-cC--CC
Confidence            6655567999999876567899999999999999999999999999999999999999999999999875421 12  45


Q ss_pred             CChhhcCCCchHHHHHHhhhcCCCCccccceeeeccceeCCEEeCCCCEEeecccccccCCCCCCCCCCCCCCCCCCCCC
Q 038621          321 LSWADTKKMPITSRVIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSPEIFPDPEKFDPSRFEVSPK  400 (477)
Q Consensus       321 ~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~~~  400 (477)
                      +++++++++||++|||+|+||++|++++..|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||+++..
T Consensus       318 ~~~~~~~~l~yl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~~  397 (463)
T PLN02196        318 LTWEDTKKMPLTSRVIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAPK  397 (463)
T ss_pred             CCHHHHhcChHHHHHHHHHHhcCCCccccceeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCCCC
Confidence            89999999999999999999999999988899999999999999999999999999999999999999999999998777


Q ss_pred             CCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCeEEEecCCCcccccccccCCCCccEEEEEc
Q 038621          401 PNTFMPFGNGTHSCPGNELAKLEILVLLHHLTTKYRWTVVGTNTGIQYGPFALPMNGLPIRLAQK  465 (477)
Q Consensus       401 ~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  465 (477)
                      +..++|||+|+|.|+|+++|++|++++++.|+++|++++.+++....+..+..|+++++|++++.
T Consensus       398 ~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  462 (463)
T PLN02196        398 PNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTSNGIQYGPFALPQNGLPIALSRK  462 (463)
T ss_pred             CCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCCCceEEcccccCCCCceEEEecC
Confidence            78999999999999999999999999999999999999987765666777788999999999875


No 2  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1e-78  Score=579.51  Aligned_cols=404  Identities=30%  Similarity=0.464  Sum_probs=341.4

Q ss_pred             CCCCCCCCccccccccchhccccCchHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHhhCCcccccCchh--hhh
Q 038621           33 NLPLPPGTLGWPYIGETFELYSQNPNVFFASKVKRYGSIFKTHILGCPCVMISSPEAAKFVLVTRAHLFKPTFPA--SKE  110 (477)
Q Consensus        33 ~~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~yG~i~~i~~~~~~~vvv~~~~~~~~il~~~~~~~~~~~~~--~~~  110 (477)
                      ..++||||++||+|||++++....++..+.+++++|||||++++|..++|||+|+++++|++++++..|++++..  ...
T Consensus        24 ~~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~  103 (489)
T KOG0156|consen   24 RRNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLK  103 (489)
T ss_pred             CCCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHH
Confidence            378999999999999999984334899999999999999999999999999999999999999999999998752  334


Q ss_pred             hhh-cCCceeec-CChhHHHhHHHHHhc-CCHHHHHhhHHHHHHHHHHHHHHhc----CCcccHHHHHHHHHHHHHHHHh
Q 038621          111 RMI-GKQAIFFH-QGDYHIKLRKLVLRA-FMPEAIKNIIPDIECIAKDSLQSWQ----GRLINTYQEMKIYTFNVALLSI  183 (477)
Q Consensus       111 ~~~-g~~~~~~~-~g~~w~~~R~~~~~~-~~~~~l~~~~~~~~~~~~~~l~~~~----~~~v~~~~~~~~~~~~~~~~~~  183 (477)
                      .+. |+.++.++ +|+.|+.+||+.... ++...+++....-.++++.+++.+.    ++++|+...+..++.++|++++
T Consensus       104 ~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~~~~~~vdl~~~l~~~~~nvI~~~~  183 (489)
T KOG0156|consen  104 YLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKSKKGEPVDLSELLDLLVGNVICRML  183 (489)
T ss_pred             HhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhcCCCceeeHHHHHHHHHHHHHHHHH
Confidence            444 56888877 899999999998775 6677777777777888888888874    2689999999999999999999


Q ss_pred             cCCCchhh----HHHHHHHHHHHhhcc------cccC-c--cCCC--hhhHHHHHHHHHHHHHHHHHHHHHHhcc--cCC
Q 038621          184 FGKDEVLY----REDLKRCYYILEKGY------NSMP-I--NLPG--TLFHKSMKARKELAQIVAKIISTRRQMK--LDH  246 (477)
Q Consensus       184 fG~~~~~~----~~~~~~~~~~~~~~~------~~~~-~--~~p~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~  246 (477)
                      ||.++...    ..++.+.........      ..+| +  +++.  ...++......++..++++.++++++..  ++.
T Consensus       184 fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~~~~~~  263 (489)
T KOG0156|consen  184 FGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKIGDEEG  263 (489)
T ss_pred             hCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Confidence            99986542    122444433333221      1233 1  1221  1223344445568999999999987642  233


Q ss_pred             CChHHhhhhcCC-----CCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcChhHHHHHHHHHHHHhhhcccCCccccC
Q 038621          247 NDLLGSFMGAKE-----GLTDEQIADNIIGVIFAARDTTASALTWIVKYLGENPGVLQAVTEEQEAIIKSKEKSGEEEVL  321 (477)
Q Consensus       247 ~d~l~~ll~~~~-----~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~  321 (477)
                      .|+++.+++..+     .++++++...+.++++||+|||++++.|++.+|++||++|+|+|+|++.+++.+      +.+
T Consensus       264 ~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~------r~v  337 (489)
T KOG0156|consen  264 RDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKG------RLV  337 (489)
T ss_pred             CcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC------CCC
Confidence            799999997631     289999999999999999999999999999999999999999999999998763      349


Q ss_pred             ChhhcCCCchHHHHHHhhhcCCCCcccc-ceeeeccceeCCEEeCCCCEEeecccccccCCCCCCCCCCCCCCCCCCCC-
Q 038621          322 SWADTKKMPITSRVIQETLRVASILSFT-FREAVEDVEYEGYLIPKGWKVLPLFRNIHHSPEIFPDPEKFDPSRFEVSP-  399 (477)
Q Consensus       322 ~~~~l~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~~-  399 (477)
                      +..|+.+||||+|+|+|++|++|++|+. +|.+.+|++++||.|||||.|+++.|++||||++|+||++|+||||+++. 
T Consensus       338 ~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~~d  417 (489)
T KOG0156|consen  338 SESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDSND  417 (489)
T ss_pred             ChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCCcc
Confidence            9999999999999999999999999964 69999999999999999999999999999999999999999999999964 


Q ss_pred             ---CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCeEEEecC
Q 038621          400 ---KPNTFMPFGNGTHSCPGNELAKLEILVLLHHLTTKYRWTVVGT  442 (477)
Q Consensus       400 ---~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~  442 (477)
                         ....++|||.|+|.|||..+|++++.+++|+|+++|||+++++
T Consensus       418 ~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~  463 (489)
T KOG0156|consen  418 GKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG  463 (489)
T ss_pred             ccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC
Confidence               5778999999999999999999999999999999999999866


No 3  
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=2.3e-77  Score=588.32  Aligned_cols=430  Identities=32%  Similarity=0.650  Sum_probs=353.8

Q ss_pred             CCCCCCCCCCccccccccchhccc----cCchHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHhhCCcccccCch
Q 038621           31 GRNLPLPPGTLGWPYIGETFELYS----QNPNVFFASKVKRYGSIFKTHILGCPCVMISSPEAAKFVLVTRAHLFKPTFP  106 (477)
Q Consensus        31 ~~~~~~ppgp~~~P~~G~~~~~~~----~~~~~~~~~~~~~yG~i~~i~~~~~~~vvv~~~~~~~~il~~~~~~~~~~~~  106 (477)
                      .++.+.||||+++|++||++.+..    +.++.++.+++++||++|++++|++++|+++||+++++++++++..|..+.+
T Consensus        34 ~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~  113 (490)
T PLN02500         34 QKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYP  113 (490)
T ss_pred             cCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCc
Confidence            455578999999999999876532    3466789999999999999999999999999999999999988776754444


Q ss_pred             hhhhhhhcCCceeecCChhHHHhHHHHHhcCCHHHHHh-hHHHHHHHHHHHHHHhc-CCcccHHHHHHHHHHHHHHHHhc
Q 038621          107 ASKERMIGKQAIFFHQGDYHIKLRKLVLRAFMPEAIKN-IIPDIECIAKDSLQSWQ-GRLINTYQEMKIYTFNVALLSIF  184 (477)
Q Consensus       107 ~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~~~~~l~~-~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~f  184 (477)
                      ......+|..++++.+|+.|+++|+++.+.|+..+++. +.+.+.+.+..+++.+. ++.+|+.+.++.++++++++++|
T Consensus       114 ~~~~~~~g~~~~~~~~g~~wr~~Rk~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~f  193 (490)
T PLN02500        114 RSIGGILGKWSMLVLVGDMHRDMRSISLNFLSHARLRTHLLKEVERHTLLVLDSWKENSTFSAQDEAKKFTFNLMAKHIM  193 (490)
T ss_pred             hHHHHHhCcccccccCCHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCCCCEEehHHHHHHHHHHHHHHHh
Confidence            33344556457888899999999999999999999987 57788888888888884 56799999999999999999999


Q ss_pred             CCCchh-hHHHHHHHHHHHhhcccccCccCCChhhHHHHHHHHHHHHHHHHHHHHHHhc---cc---CCCChHHhhhhcC
Q 038621          185 GKDEVL-YREDLKRCYYILEKGYNSMPINLPGTLFHKSMKARKELAQIVAKIISTRRQM---KL---DHNDLLGSFMGAK  257 (477)
Q Consensus       185 G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~---~~~d~l~~ll~~~  257 (477)
                      |.+.+. ....+.+.+..........+.++|...+++..++++.+.+++.+.++++++.   .+   ...|+++.+++. 
T Consensus       194 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~-  272 (490)
T PLN02500        194 SMDPGEEETEQLKKEYVTFMKGVVSAPLNFPGTAYRKALKSRATILKFIERKMEERIEKLKEEDESVEEDDLLGWVLKH-  272 (490)
T ss_pred             CCCCCchHHHHHHHHHHHHHhhhhcchhcCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCcchHHHHHHhc-
Confidence            986432 2233333333333322223344555445666777888899999988887643   11   246899999875 


Q ss_pred             CCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcChhHHHHHHHHHHHHhhhcc-cCCccccCChhhcCCCchHHHHH
Q 038621          258 EGLTDEQIADNIIGVIFAARDTTASALTWIVKYLGENPGVLQAVTEEQEAIIKSKE-KSGEEEVLSWADTKKMPITSRVI  336 (477)
Q Consensus       258 ~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~-~~~~~~~~~~~~l~~lp~l~a~i  336 (477)
                      ..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++.+... .++  ..++++++++|||++|||
T Consensus       273 ~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~--~~~~~~d~~~lpyl~avi  350 (490)
T PLN02500        273 SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGE--SELNWEDYKKMEFTQCVI  350 (490)
T ss_pred             cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCC--CCCCHHHhccCHHHHHHH
Confidence            46899999999999999999999999999999999999999999999999874311 011  458999999999999999


Q ss_pred             HhhhcCCCCccccceeeeccceeCCEEeCCCCEEeecccccccCCCCCCCCCCCCCCCCCCCC-----------CCCCcc
Q 038621          337 QETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSPEIFPDPEKFDPSRFEVSP-----------KPNTFM  405 (477)
Q Consensus       337 ~E~lRl~p~~~~~~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~~-----------~~~~~~  405 (477)
                      +|+||++|++|.++|.+.+|++++||.|||||.|+++.|++||||++|+||++|+||||+++.           .+..++
T Consensus       351 kEtlRl~P~~~~~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~l  430 (490)
T PLN02500        351 NETLRLGNVVRFLHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFM  430 (490)
T ss_pred             HHHHhcCCCccCeeeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChhhccCCCcccccccccCCCCCCCc
Confidence            999999999998889999999999999999999999999999999999999999999999641           346799


Q ss_pred             ccCCCCCCCccHHHHHHHHHHHHHHHHhcCeEEEecCCCcccccccccCCCCccEEEEE
Q 038621          406 PFGNGTHSCPGNELAKLEILVLLHHLTTKYRWTVVGTNTGIQYGPFALPMNGLPIRLAQ  464 (477)
Q Consensus       406 ~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  464 (477)
                      |||.|+|.|+|+++|++|+++++|.|+++|++++.++..... .++..++++++|++++
T Consensus       431 pFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~~~~-~~~~~~~~~l~~~~~~  488 (490)
T PLN02500        431 PFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQAFA-FPFVDFPKGLPIRVRR  488 (490)
T ss_pred             CCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCccee-cccccCCCCceEEEEe
Confidence            999999999999999999999999999999999977654333 2344566799999876


No 4  
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=1.2e-76  Score=578.74  Aligned_cols=426  Identities=35%  Similarity=0.638  Sum_probs=361.3

Q ss_pred             CCCCCCCccccccccchhccccCchHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHhhCCcccccCchhhhhhhh
Q 038621           34 LPLPPGTLGWPYIGETFELYSQNPNVFFASKVKRYGSIFKTHILGCPCVMISSPEAAKFVLVTRAHLFKPTFPASKERMI  113 (477)
Q Consensus        34 ~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~yG~i~~i~~~~~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~~~~  113 (477)
                      .+.||||+++|++||++.+. +++..++.+++++||++|+++++++++++++||++++++++++...+...........+
T Consensus        30 ~~~ppgp~~~P~~G~~~~~~-~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~l  108 (463)
T PLN02774         30 KGLPPGTMGWPLFGETTEFL-KQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSMLDIL  108 (463)
T ss_pred             CCCCCCCCCCCchhhHHHHH-HhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHHHHh
Confidence            35788999999999998874 67888999999999999999999999999999999999998777666444333333456


Q ss_pred             cCCceeecCChhHHHhHHHHHhcCCHHHHHh-hHHHHHHHHHHHHHHhc-CCcccHHHHHHHHHHHHHHHHhcCCCchhh
Q 038621          114 GKQAIFFHQGDYHIKLRKLVLRAFMPEAIKN-IIPDIECIAKDSLQSWQ-GRLINTYQEMKIYTFNVALLSIFGKDEVLY  191 (477)
Q Consensus       114 g~~~~~~~~g~~w~~~R~~~~~~~~~~~l~~-~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~fG~~~~~~  191 (477)
                      |..++++.+|+.|+++|+.+.+.|++..++. +.+.+.+.+++++++|. ++.+|+.+.+..+++++++.++||.+....
T Consensus       109 g~~~~~~~~g~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~~  188 (463)
T PLN02774        109 GTCNIAAVHGSTHRYMRGSLLSLISPTMIRDHLLPKIDEFMRSHLSGWDGLKTIDIQEKTKEMALLSALKQIAGTLSKPI  188 (463)
T ss_pred             CccchhhcCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhCCCCCEEeeHHHHHHHHHHHHHHHcCCCChHH
Confidence            6567887899999999999999999999876 78999999999999885 467999999999999999999999865443


Q ss_pred             HHHHHHHHHHHhhcccccCccCCChhhHHHHHHHHHHHHHHHHHHHHHHhcccCCCChHHhhhhcCC---CCCHHHHHHH
Q 038621          192 REDLKRCYYILEKGYNSMPINLPGTLFHKSMKARKELAQIVAKIISTRRQMKLDHNDLLGSFMGAKE---GLTDEQIADN  268 (477)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~l~~ll~~~~---~~~~~~i~~~  268 (477)
                      ..++.+.+..+......++.++|...+++..++++.+.+++.+.++++++.....+|+++.+++..+   .++++++.++
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~d~l~~ll~~~~~~~~~s~~ei~~~  268 (463)
T PLN02774        189 SEEFKTEFFKLVLGTLSLPIDLPGTNYRSGVQARKNIVRMLRQLIQERRASGETHTDMLGYLMRKEGNRYKLTDEEIIDQ  268 (463)
T ss_pred             HHHHHHHHHHHhcccccCCcCCCChhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHhCccCCCCCCHHHHHHH
Confidence            4444444444443333455566766567777889999999999999987765556799999986432   4799999999


Q ss_pred             HHHHHhhcccchHHHHHHHHHHHhcChhHHHHHHHHHHHHhhhcccCCccccCChhhcCCCchHHHHHHhhhcCCCCccc
Q 038621          269 IIGVIFAARDTTASALTWIVKYLGENPGVLQAVTEEQEAIIKSKEKSGEEEVLSWADTKKMPITSRVIQETLRVASILSF  348 (477)
Q Consensus       269 ~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~  348 (477)
                      +.++++||+|||+++++|++++|++||++|+|+++|++++.+... +.  ..++++++++|||++|||+|+||++|+++.
T Consensus       269 ~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~-~~--~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~  345 (463)
T PLN02774        269 IITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKR-PE--DPIDWNDYKSMRFTRAVIFETSRLATIVNG  345 (463)
T ss_pred             HHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccC-CC--CCCCHHHHhcCcHHHHHHHHHHhcCCCCCC
Confidence            999999999999999999999999999999999999999975321 11  458999999999999999999999999998


Q ss_pred             cceeeeccceeCCEEeCCCCEEeecccccccCCCCCCCCCCCCCCCCCCCC--CCCCccccCCCCCCCccHHHHHHHHHH
Q 038621          349 TFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSPEIFPDPEKFDPSRFEVSP--KPNTFMPFGNGTHSCPGNELAKLEILV  426 (477)
Q Consensus       349 ~~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~~--~~~~~~~Fg~G~r~C~G~~lA~~~~~~  426 (477)
                      +.|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||+++.  ....++|||+|+|.|||+++|.+|+++
T Consensus       346 ~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~~~~~~lpFG~G~r~C~G~~~A~~e~~~  425 (463)
T PLN02774        346 VLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSLESHNYFFLFGGGTRLCPGKELGIVEIST  425 (463)
T ss_pred             cccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCcCCCccccCcCCCCCcCCcHHHHHHHHHH
Confidence            789999999999999999999999999999999999999999999999753  234689999999999999999999999


Q ss_pred             HHHHHHhcCeEEEecCCCcccccccccCCCCccEEEEE
Q 038621          427 LLHHLTTKYRWTVVGTNTGIQYGPFALPMNGLPIRLAQ  464 (477)
Q Consensus       427 ~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  464 (477)
                      +++.|+++|++++.++.. ....++..|++|++|++++
T Consensus       426 ~la~Ll~~f~~~~~~~~~-~~~~~~~~p~~g~~~~~~~  462 (463)
T PLN02774        426 FLHYFVTRYRWEEVGGDK-LMKFPRVEAPNGLHIRVSP  462 (463)
T ss_pred             HHHHHHHhceEEECCCCc-cccCCCCCCCCCceEEeee
Confidence            999999999999976643 2334566688999999873


No 5  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=8e-77  Score=557.50  Aligned_cols=430  Identities=25%  Similarity=0.392  Sum_probs=350.0

Q ss_pred             CCCCCCCCCCccccccccchhcccc-CchHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHhhCCcccccC--chh
Q 038621           31 GRNLPLPPGTLGWPYIGETFELYSQ-NPNVFFASKVKRYGSIFKTHILGCPCVMISSPEAAKFVLVTRAHLFKPT--FPA  107 (477)
Q Consensus        31 ~~~~~~ppgp~~~P~~G~~~~~~~~-~~~~~~~~~~~~yG~i~~i~~~~~~~vvv~~~~~~~~il~~~~~~~~~~--~~~  107 (477)
                      ....++.|+|+++|++||+..+... .+.....+.+.+||+++.++.+.++.++|+||+.+++|+.+....|.++  ...
T Consensus        27 yw~rrGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~  106 (499)
T KOG0158|consen   27 YWRRRGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIY  106 (499)
T ss_pred             hhccCCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCc
Confidence            4455689999999999999888532 2344444444555999999999999999999999999999998888873  221


Q ss_pred             hhhh-hhcCCceeecCChhHHHhHHHHHhcCCHHHHHhhHHHHHHHHHHHHHHhc--C---CcccHHHHHHHHHHHHHHH
Q 038621          108 SKER-MIGKQAIFFHQGDYHIKLRKLVLRAFMPEAIKNIIPDIECIAKDSLQSWQ--G---RLINTYQEMKIYTFNVALL  181 (477)
Q Consensus       108 ~~~~-~~g~~~~~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~--~---~~v~~~~~~~~~~~~~~~~  181 (477)
                      .-.. -.+..+++..+|+.|+++|..+.|.|++.+++++.+.+++.++++++.++  .   ..+++.+.+.+++.|+|++
T Consensus       107 ~d~~~~l~~~~Lf~~~g~~WK~lR~~lsP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DVI~~  186 (499)
T KOG0158|consen  107 GDPEDPLSALNLFFLRGERWKRLRTKLSPTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDVIGS  186 (499)
T ss_pred             CCCCCcccccCchhccCchHHHHHHhhccccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHHHhH
Confidence            1111 23347788899999999999999999999999999999999999998883  2   3889999999999999999


Q ss_pred             HhcCCCchhhH---HHHHHHHHHHhhc-ccccCc------cCCCh-----hhHHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 038621          182 SIFGKDEVLYR---EDLKRCYYILEKG-YNSMPI------NLPGT-----LFHKSMKARKELAQIVAKIISTRRQMKLDH  246 (477)
Q Consensus       182 ~~fG~~~~~~~---~~~~~~~~~~~~~-~~~~~~------~~p~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  246 (477)
                      ++||.+.+...   ..+.......... ....+.      .+|..     ......+..+.+.+.+.+.++.|..++..+
T Consensus       187 ~AfG~~~~s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l~~~~~~~~~~~~~~~~v~~~v~~R~~~~~~r  266 (499)
T KOG0158|consen  187 CAFGLDANSLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPLRVKLFPEDVTDFFRKLVNSRVEQREKENIER  266 (499)
T ss_pred             hhcccchhhhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhhhcccChHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence            99999754332   2222211111111 111111      01111     011123455677777788888886666678


Q ss_pred             CChHHhhhhcCC----------CCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcChhHHHHHHHHHHHHhhhcccCC
Q 038621          247 NDLLGSFMGAKE----------GLTDEQIADNIIGVIFAARDTTASALTWIVKYLGENPGVLQAVTEEQEAIIKSKEKSG  316 (477)
Q Consensus       247 ~d~l~~ll~~~~----------~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~  316 (477)
                      +|+++.+++.+.          .++.++++++++.+++||.||||+++++++|.||+|||+|+|+|+||++++...    
T Consensus       267 ~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~----  342 (499)
T KOG0158|consen  267 NDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEVLEEK----  342 (499)
T ss_pred             chHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhccc----
Confidence            999999998763          489999999999999999999999999999999999999999999999997552    


Q ss_pred             ccccCChhhcCCCchHHHHHHhhhcCCCCccccceeeeccceeC-CEEeCCCCEEeecccccccCCCCCCCCCCCCCCCC
Q 038621          317 EEEVLSWADTKKMPITSRVIQETLRVASILSFTFREAVEDVEYE-GYLIPKGWKVLPLFRNIHHSPEIFPDPEKFDPSRF  395 (477)
Q Consensus       317 ~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~i~-g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeR~  395 (477)
                        ..+++|.+.+|+||++||+||||+||++|.+-|+|++|++++ ++.||||+.|.++.|++||||++||||++|+||||
T Consensus       343 --~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PERF  420 (499)
T KOG0158|consen  343 --EGLTYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFKPERF  420 (499)
T ss_pred             --CCCCHHHHhCCcHHHHHHHHHHhhCCCcccccceecCceecCCCeEeCCCCEEEeecccccCCcccCCCcccCCCccC
Confidence              239999999999999999999999999998779999999999 99999999999999999999999999999999999


Q ss_pred             CCC----CCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCeEEEecCCCc-ccc---cccccCCCCccEEEEEcc
Q 038621          396 EVS----PKPNTFMPFGNGTHSCPGNELAKLEILVLLHHLTTKYRWTVVGTNTG-IQY---GPFALPMNGLPIRLAQKS  466 (477)
Q Consensus       396 l~~----~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~-~~~---~~~~~~~~~~~v~~~~r~  466 (477)
                      .++    .++..|+|||.|||+|+|+++|.+|+|+.|+.||++|+++..+.... ...   +.+..|++|+.+++++|.
T Consensus       421 ~~~~~~~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t~~~~~~~~~~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  421 EEENNKSRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTTIIPLEGDPKGFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             CCCcccccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCcccCcccCCccceeeecCCceEEEEEeCC
Confidence            975    36789999999999999999999999999999999999999874221 222   567899999999999984


No 6  
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=6.3e-75  Score=565.28  Aligned_cols=434  Identities=34%  Similarity=0.617  Sum_probs=366.8

Q ss_pred             CCCCCCCCCCCccccccccchhcc----ccCchHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHhhCCcccccCc
Q 038621           30 NGRNLPLPPGTLGWPYIGETFELY----SQNPNVFFASKVKRYGSIFKTHILGCPCVMISSPEAAKFVLVTRAHLFKPTF  105 (477)
Q Consensus        30 ~~~~~~~ppgp~~~P~~G~~~~~~----~~~~~~~~~~~~~~yG~i~~i~~~~~~~vvv~~~~~~~~il~~~~~~~~~~~  105 (477)
                      ++++.+.||||.++|++||++.+.    ..+++.++.+++++||+||++++++.++|+++||+++++++.+++..|..+.
T Consensus         2 ~~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~   81 (452)
T PLN03141          2 SKKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAY   81 (452)
T ss_pred             CCCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccC
Confidence            355667899999999999998873    2468899999999999999999999999999999999999998887777654


Q ss_pred             hhhhhhhhcCCceeecCChhHHHhHHHHHhcCCHHHHHh-hHHHHHHHHHHHHHHhc-CCcccHHHHHHHHHHHHHHHHh
Q 038621          106 PASKERMIGKQAIFFHQGDYHIKLRKLVLRAFMPEAIKN-IIPDIECIAKDSLQSWQ-GRLINTYQEMKIYTFNVALLSI  183 (477)
Q Consensus       106 ~~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~~~~~l~~-~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~  183 (477)
                      .......+|..++++.+|+.|+++|+++.+.|+...+.. +.+.+.+.+.++++++. ++.+++.+.+..++++++++++
T Consensus        82 ~~~~~~l~g~~~~~~~~g~~wr~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~  161 (452)
T PLN03141         82 PKSLTELMGKSSILLINGSLQRRVHGLIGAFLKSPHLKAQITRDMERYVSESLDSWRDDPPVLVQDETKKIAFEVLVKAL  161 (452)
T ss_pred             chhHHHHhCcccccccCcHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhccCCCCEEhHHHHHHHHHHHHHHHH
Confidence            444455677567888899999999999999998887766 46778888888888774 5678999999999999999999


Q ss_pred             cCCCchhhHHHHHHHHHHHhhcccccCccCCChhhHHHHHHHHHHHHHHHHHHHHHHhccc--------CCCChHHhhhh
Q 038621          184 FGKDEVLYREDLKRCYYILEKGYNSMPINLPGTLFHKSMKARKELAQIVAKIISTRRQMKL--------DHNDLLGSFMG  255 (477)
Q Consensus       184 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--------~~~d~l~~ll~  255 (477)
                      ||.+..+....+.+.+..+......+|.++|.+.+++..++++++.+++.+.++++++..+        ...|+++.+++
T Consensus       162 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~  241 (452)
T PLN03141        162 ISLEPGEEMEFLKKEFQEFIKGLMSLPIKLPGTRLYRSLQAKKRMVKLVKKIIEEKRRAMKNKEEDETGIPKDVVDVLLR  241 (452)
T ss_pred             cCCCchHHHHHHHHHHHHHhhhHHhCccCCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhHHHHHHh
Confidence            9986544444555555555444444565667665666677889999999999988875421        13589999887


Q ss_pred             cC-CCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcChhHHHHHHHHHHHHhhhcccCCccccCChhhcCCCchHHH
Q 038621          256 AK-EGLTDEQIADNIIGVIFAARDTTASALTWIVKYLGENPGVLQAVTEEQEAIIKSKEKSGEEEVLSWADTKKMPITSR  334 (477)
Q Consensus       256 ~~-~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~lp~l~a  334 (477)
                      .. ..++++++..++.++++||+|||+.+++|++++|++||++|+++++|++++.+.....+  ..++.+++.+|||++|
T Consensus       242 ~~~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~--~~~~~~~~~~lpyl~a  319 (452)
T PLN03141        242 DGSDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTG--EPLYWTDYMSLPFTQN  319 (452)
T ss_pred             cCCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCCC--CCCCHHHHhccHHHHH
Confidence            64 35899999999999999999999999999999999999999999999998864221112  4589999999999999


Q ss_pred             HHHhhhcCCCCccccceeeeccceeCCEEeCCCCEEeecccccccCCCCCCCCCCCCCCCCCCC-CCCCCccccCCCCCC
Q 038621          335 VIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSPEIFPDPEKFDPSRFEVS-PKPNTFMPFGNGTHS  413 (477)
Q Consensus       335 ~i~E~lRl~p~~~~~~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~-~~~~~~~~Fg~G~r~  413 (477)
                      ||+|++|++|++++++|.+.+|++++||.||||+.|+++.+++|||+++|+||++|+||||+++ ..+..++|||+|+|.
T Consensus       320 vi~E~lRl~p~~~~~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~pFG~G~R~  399 (452)
T PLN03141        320 VITETLRMGNIINGVMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEKDMNNSSFTPFGGGQRL  399 (452)
T ss_pred             HHHHHHhccCCcCCcceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCcccccCCCCCCCCCCCCCCCCCC
Confidence            9999999999998888999999999999999999999999999999999999999999999975 345689999999999


Q ss_pred             CccHHHHHHHHHHHHHHHHhcCeEEEecCCCcccccccccCCCCccEEEEEccC
Q 038621          414 CPGNELAKLEILVLLHHLTTKYRWTVVGTNTGIQYGPFALPMNGLPIRLAQKSK  467 (477)
Q Consensus       414 C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  467 (477)
                      |+|+++|.+|+++++|.|+++|++++.++..  ...++..|..+++|++++|+.
T Consensus       400 C~G~~lA~~el~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  451 (452)
T PLN03141        400 CPGLDLARLEASIFLHHLVTRFRWVAEEDTI--VNFPTVRMKRKLPIWVTRIDD  451 (452)
T ss_pred             CChHHHHHHHHHHHHHHHHhcCeeecCCCCe--eecccccCCCCceEEEEeCCC
Confidence            9999999999999999999999999876542  224688999999999999953


No 7  
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=1.3e-73  Score=564.16  Aligned_cols=436  Identities=38%  Similarity=0.689  Sum_probs=363.5

Q ss_pred             cCCCCCCCCCCCccccccccchhcc----ccCchHHHHHHHHhhCC--eEEEeecCccEEEEcCHHHHHHHHhhCCcccc
Q 038621           29 SNGRNLPLPPGTLGWPYIGETFELY----SQNPNVFFASKVKRYGS--IFKTHILGCPCVMISSPEAAKFVLVTRAHLFK  102 (477)
Q Consensus        29 ~~~~~~~~ppgp~~~P~~G~~~~~~----~~~~~~~~~~~~~~yG~--i~~i~~~~~~~vvv~~~~~~~~il~~~~~~~~  102 (477)
                      +..++.+.||||+++|++|+++.+.    ..+++.++.+++++||+  +|++++++.+.|+++||+++++++.+++ .|.
T Consensus        36 ~~~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~~-~f~  114 (490)
T PLN02302         36 LGEGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDDD-AFE  114 (490)
T ss_pred             hccCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCCC-ccc
Confidence            3556667899999999999998774    24688999999999997  7999999999999999999999998764 454


Q ss_pred             cCchhhhhhhhcCCceeecCChhHHHhHHHHHhcCC-HHHHHhhHHHHHHHHHHHHHHhc-CCcccHHHHHHHHHHHHHH
Q 038621          103 PTFPASKERMIGKQAIFFHQGDYHIKLRKLVLRAFM-PEAIKNIIPDIECIAKDSLQSWQ-GRLINTYQEMKIYTFNVAL  180 (477)
Q Consensus       103 ~~~~~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~~-~~~l~~~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~  180 (477)
                      .+.+......+|..++...+|+.|+++|+.+.+.|+ ++.++.+.+.+.+.++++++.+. ++.+|+.+++..+++++++
T Consensus       115 ~~~~~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~~~~v~~~~~~~~~~~~vi~  194 (490)
T PLN02302        115 PGWPESTVELIGRKSFVGITGEEHKRLRRLTAAPVNGPEALSTYIPYIEENVKSCLEKWSKMGEIEFLTELRKLTFKIIM  194 (490)
T ss_pred             cCCchhHHHHhccccccccCcHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHhcCCCCEehHHHHHHHHHHHHH
Confidence            443332223566555666799999999999999995 78899999999999999999983 5679999999999999999


Q ss_pred             HHhcCCCchhhHHHHHHHHHHHhhcccccCccCCChhhHHHHHHHHHHHHHHHHHHHHHHhcc-----cCCCChHHhhhh
Q 038621          181 LSIFGKDEVLYREDLKRCYYILEKGYNSMPINLPGTLFHKSMKARKELAQIVAKIISTRRQMK-----LDHNDLLGSFMG  255 (477)
Q Consensus       181 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~d~l~~ll~  255 (477)
                      +++||.+.....+.+.+.+..+...+...+..+|...+++..++.+.+.+++.+.++++++..     ....|+++.+++
T Consensus       195 ~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~  274 (490)
T PLN02302        195 YIFLSSESELVMEALEREYTTLNYGVRAMAINLPGFAYHRALKARKKLVALFQSIVDERRNSRKQNISPRKKDMLDLLLD  274 (490)
T ss_pred             HHHcCCCChHHHHHHHHHHHHHHHHhhhCCcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcCCHHHHHHh
Confidence            999998755444444443333333333333445655556666778889999999998876542     134789999986


Q ss_pred             cC----CCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcChhHHHHHHHHHHHHhhhcccCCccccCChhhcCCCch
Q 038621          256 AK----EGLTDEQIADNIIGVIFAARDTTASALTWIVKYLGENPGVLQAVTEEQEAIIKSKEKSGEEEVLSWADTKKMPI  331 (477)
Q Consensus       256 ~~----~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~lp~  331 (477)
                      ..    ..++++++.+++.++++||+|||+.+++|++++|++||++|+|+++|++++.+......  ..++++++++|||
T Consensus       275 ~~~~~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~--~~~~~~~l~~lpy  352 (490)
T PLN02302        275 AEDENGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQ--KGLTLKDVRKMEY  352 (490)
T ss_pred             hhccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCC--CCCCHHHHhcChH
Confidence            53    24789999999999999999999999999999999999999999999999976422111  2378999999999


Q ss_pred             HHHHHHhhhcCCCCccccceeeeccceeCCEEeCCCCEEeecccccccCCCCCCCCCCCCCCCCCCC-CCCCCccccCCC
Q 038621          332 TSRVIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSPEIFPDPEKFDPSRFEVS-PKPNTFMPFGNG  410 (477)
Q Consensus       332 l~a~i~E~lRl~p~~~~~~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~-~~~~~~~~Fg~G  410 (477)
                      ++|||+|+||++|++|...|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||+++ ..+..++|||+|
T Consensus       353 l~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~~~~~~~~pFG~G  432 (490)
T PLN02302        353 LSQVIDETLRLINISLTVFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYTPKAGTFLPFGLG  432 (490)
T ss_pred             HHHHHHHHHHhCCCcccchhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccChhhcCCCCCCCCCccCCCCC
Confidence            9999999999999999888999999999999999999999999999999999999999999999975 345789999999


Q ss_pred             CCCCccHHHHHHHHHHHHHHHHhcCeEEEecCCCcccccccccCCCCccEEEEEccC
Q 038621          411 THSCPGNELAKLEILVLLHHLTTKYRWTVVGTNTGIQYGPFALPMNGLPIRLAQKSK  467 (477)
Q Consensus       411 ~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  467 (477)
                      +|.|+|+++|.+|++++++.|+++|++++.++...+...+...|.+++++++++|+.
T Consensus       433 ~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  489 (490)
T PLN02302        433 SRLCPGNDLAKLEISIFLHHFLLGYRLERLNPGCKVMYLPHPRPKDNCLARITKVAS  489 (490)
T ss_pred             CcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCCCcceeCCCCCCCCCceEEEEeccC
Confidence            999999999999999999999999999998665445556678999999999998863


No 8  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=1.1e-73  Score=566.77  Aligned_cols=427  Identities=19%  Similarity=0.315  Sum_probs=336.6

Q ss_pred             CCCCCCCCCccccccccchhccccCc-hHHHHHHHHhhC-CeEEEeecCccEEEEcCHHHHHHHHhhCCcccccCchhhh
Q 038621           32 RNLPLPPGTLGWPYIGETFELYSQNP-NVFFASKVKRYG-SIFKTHILGCPCVMISSPEAAKFVLVTRAHLFKPTFPASK  109 (477)
Q Consensus        32 ~~~~~ppgp~~~P~~G~~~~~~~~~~-~~~~~~~~~~yG-~i~~i~~~~~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~  109 (477)
                      ++.+.||||+++|++||++.+..+.+ +.++.+++++|| +||++++|+.++|+++||+++++++.+++..|.+++....
T Consensus        54 r~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~  133 (543)
T PLN02971         54 KLHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYA  133 (543)
T ss_pred             CCCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccc
Confidence            45678999999999999988753333 678999999999 7999999999999999999999999998877877654333


Q ss_pred             hhhhcCC---ceeecCChhHHHhHHHHHhc-CCHHHHHhhHHHHHHHHHHHHHHh-----cCCcccHHHHHHHHHHHHHH
Q 038621          110 ERMIGKQ---AIFFHQGDYHIKLRKLVLRA-FMPEAIKNIIPDIECIAKDSLQSW-----QGRLINTYQEMKIYTFNVAL  180 (477)
Q Consensus       110 ~~~~g~~---~~~~~~g~~w~~~R~~~~~~-~~~~~l~~~~~~~~~~~~~~l~~~-----~~~~v~~~~~~~~~~~~~~~  180 (477)
                      ...+|..   +++..+|+.|+++|+++.+. +++..++.+.+.++++++.+++.+     .++++|+.+.++++++++++
T Consensus       134 ~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~  213 (543)
T PLN02971        134 QKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAIK  213 (543)
T ss_pred             hhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHHH
Confidence            3444422   36777899999999999764 555566677788888877776654     24579999999999999999


Q ss_pred             HHhcCCCchh--------hHHHHHHHHHHHhhc----cc-ccCccCCCh------h-hHHHHHHHHHHHHHHHHHHHHHH
Q 038621          181 LSIFGKDEVL--------YREDLKRCYYILEKG----YN-SMPINLPGT------L-FHKSMKARKELAQIVAKIISTRR  240 (477)
Q Consensus       181 ~~~fG~~~~~--------~~~~~~~~~~~~~~~----~~-~~~~~~p~~------~-~~~~~~~~~~~~~~~~~~i~~~~  240 (477)
                      +++||.+...        ...+..+....+...    .. .++.++|..      . .+...+..+.+.+++.+.+++++
T Consensus       214 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  293 (543)
T PLN02971        214 RLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDERI  293 (543)
T ss_pred             HHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999986311        011111122221111    10 111112211      1 12334456677888888888775


Q ss_pred             hc---c--cCCCChHHhhhhcCC-----CCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcChhHHHHHHHHHHHHhh
Q 038621          241 QM---K--LDHNDLLGSFMGAKE-----GLTDEQIADNIIGVIFAARDTTASALTWIVKYLGENPGVLQAVTEEQEAIIK  310 (477)
Q Consensus       241 ~~---~--~~~~d~l~~ll~~~~-----~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~  310 (477)
                      +.   .  ....|+++.+++..+     .++++++.+++.++++||+|||+++++|++++|+.||++|+|+++|++++++
T Consensus       294 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v~g  373 (543)
T PLN02971        294 KMWREGKRTQIEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVVG  373 (543)
T ss_pred             HHHhccCCCCCcCHHHHHHhhhcccCCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC
Confidence            42   1  124699999997431     3899999999999999999999999999999999999999999999999986


Q ss_pred             hcccCCccccCChhhcCCCchHHHHHHhhhcCCCCccc-cceeeeccceeCCEEeCCCCEEeecccccccCCCCCCCCCC
Q 038621          311 SKEKSGEEEVLSWADTKKMPITSRVIQETLRVASILSF-TFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSPEIFPDPEK  389 (477)
Q Consensus       311 ~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  389 (477)
                      .+      ..++++++++|||++|||+|+||++|++|. ++|.+.+|++++||.||||+.|+++.|++||||++|+||++
T Consensus       374 ~~------~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~  447 (543)
T PLN02971        374 KE------RFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLS  447 (543)
T ss_pred             CC------CCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCccc
Confidence            42      568999999999999999999999999997 56999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCC-------CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCeEEEecCCCcccc----cccccCCCCc
Q 038621          390 FDPSRFEVSP-------KPNTFMPFGNGTHSCPGNELAKLEILVLLHHLTTKYRWTVVGTNTGIQY----GPFALPMNGL  458 (477)
Q Consensus       390 F~PeR~l~~~-------~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~----~~~~~~~~~~  458 (477)
                      |+||||+++.       .+..++|||+|+|.|+|+++|+.|+++++|+|+++|++++.++......    + +..-++++
T Consensus       448 F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~  526 (543)
T PLN02971        448 FKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELMESSH-DMFLSKPL  526 (543)
T ss_pred             cCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcchhhhcC-cccccccc
Confidence            9999999641       3457999999999999999999999999999999999998765433322    4 33233468


Q ss_pred             cEEEEEc
Q 038621          459 PIRLAQK  465 (477)
Q Consensus       459 ~v~~~~r  465 (477)
                      .+.+++|
T Consensus       527 ~~~~~~~  533 (543)
T PLN02971        527 VMVGELR  533 (543)
T ss_pred             eeeeeec
Confidence            8999999


No 9  
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=3.4e-74  Score=569.96  Aligned_cols=426  Identities=23%  Similarity=0.305  Sum_probs=345.7

Q ss_pred             CCCCCCCCCccccccccchhccc------------------cCchHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHH
Q 038621           32 RNLPLPPGTLGWPYIGETFELYS------------------QNPNVFFASKVKRYGSIFKTHILGCPCVMISSPEAAKFV   93 (477)
Q Consensus        32 ~~~~~ppgp~~~P~~G~~~~~~~------------------~~~~~~~~~~~~~yG~i~~i~~~~~~~vvv~~~~~~~~i   93 (477)
                      ...++||||+++|++||++.+..                  .+....+.+|+++||++|++++|+.++|+++||+.++++
T Consensus        39 ~~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~i  118 (516)
T PLN02290         39 MERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKEL  118 (516)
T ss_pred             HHHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHH
Confidence            34567999999999999987631                  123345788999999999999999999999999999999


Q ss_pred             HhhCCcccccCch---hhhhhhhcCCceeecCChhHHHhHHHHHhcCCHHHHHhhHHHHHHHHHHHHHHhc-----C-Cc
Q 038621           94 LVTRAHLFKPTFP---ASKERMIGKQAIFFHQGDYHIKLRKLVLRAFMPEAIKNIIPDIECIAKDSLQSWQ-----G-RL  164 (477)
Q Consensus        94 l~~~~~~~~~~~~---~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~-----~-~~  164 (477)
                      +.++.. +.++..   ......+| .++++.+|+.|+++|+++.+.|+.++++.+.+.+.++++++++.+.     + ..
T Consensus       119 l~~~~~-~~~r~~~~~~~~~~~~g-~~l~~~~g~~Wk~~Rk~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~  196 (516)
T PLN02290        119 LTKYNT-VTGKSWLQQQGTKHFIG-RGLLMANGADWYHQRHIAAPAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQTE  196 (516)
T ss_pred             HhcCCC-CCCCcchhhhHHHHHhc-CCccccCchHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCce
Confidence            988744 333321   11223455 6788889999999999999999999999999999999999999882     2 47


Q ss_pred             ccHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHHh---h-cc--cccCc--cCCChhhHHHHHHHHHHHHHHHHHH
Q 038621          165 INTYQEMKIYTFNVALLSIFGKDEVLYREDLKRCYYILE---K-GY--NSMPI--NLPGTLFHKSMKARKELAQIVAKII  236 (477)
Q Consensus       165 v~~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~---~-~~--~~~~~--~~p~~~~~~~~~~~~~~~~~~~~~i  236 (477)
                      +|+.+.++.++++++++++||.+.+.. +++.+.+..+.   . ..  ..+|.  ++|....++..+..+.+.+++.+.+
T Consensus       197 vd~~~~~~~~~~~vi~~~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~~~~~~~~~~~~~~~~~~~i  275 (516)
T PLN02290        197 VEIGEYMTRLTADIISRTEFDSSYEKG-KQIFHLLTVLQRLCAQATRHLCFPGSRFFPSKYNREIKSLKGEVERLLMEII  275 (516)
T ss_pred             EEhHHHHHHHHHHHHHHHHcCCccccc-hHHHHHHHHHHHHHHHhhhhhcCchhhhCCChhHHHHHHHHHHHHHHHHHHH
Confidence            899999999999999999999864322 11212211111   1 11  11221  2333323344556678888888888


Q ss_pred             HHHHhcc------cCCCChHHhhhhcC-------CCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcChhHHHHHHH
Q 038621          237 STRRQMK------LDHNDLLGSFMGAK-------EGLTDEQIADNIIGVIFAARDTTASALTWIVKYLGENPGVLQAVTE  303 (477)
Q Consensus       237 ~~~~~~~------~~~~d~l~~ll~~~-------~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~  303 (477)
                      +++++..      ....|+++.+++..       ..++++++.+++.++++||+|||+++++|++++|++||++|+|+++
T Consensus       276 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P~vq~kl~~  355 (516)
T PLN02290        276 QSRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASNPTWQDKVRA  355 (516)
T ss_pred             HHHHHHhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence            8876531      12468999988642       1368899999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhcccCCccccCChhhcCCCchHHHHHHhhhcCCCCccccceeeeccceeCCEEeCCCCEEeecccccccCCCC
Q 038621          304 EQEAIIKSKEKSGEEEVLSWADTKKMPITSRVIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSPEI  383 (477)
Q Consensus       304 Ei~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~  383 (477)
                      |++++++.       ..++++++++||||+|||+||||++|++|.++|.+.+|++++||.|||||.|.++.|++||||++
T Consensus       356 Ei~~v~~~-------~~~~~~~l~~lpYl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp~~  428 (516)
T PLN02290        356 EVAEVCGG-------ETPSVDHLSKLTLLNMVINESLRLYPPATLLPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEEL  428 (516)
T ss_pred             HHHHHhCC-------CCCCHHHHhcChHHHHHHHHHHHcCCCccccceeecCCeeECCEEECCCCEEEecHHHhcCChhh
Confidence            99999864       45899999999999999999999999999888999999999999999999999999999999999


Q ss_pred             C-CCCCCCCCCCCCCC--CCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCeEEEecCCC-cccccccccCCCCcc
Q 038621          384 F-PDPEKFDPSRFEVS--PKPNTFMPFGNGTHSCPGNELAKLEILVLLHHLTTKYRWTVVGTNT-GIQYGPFALPMNGLP  459 (477)
Q Consensus       384 ~-~~p~~F~PeR~l~~--~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~  459 (477)
                      | +||++|+||||+++  .....++|||.|+|.|+|+++|++|++++++.|+++|++++.++.. ....+.+..|.++++
T Consensus       429 ~~~dP~~F~PeRfl~~~~~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~  508 (516)
T PLN02290        429 WGKDANEFNPDRFAGRPFAPGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYRHAPVVVLTIKPKYGVQ  508 (516)
T ss_pred             hCCChhhcCccccCCCCCCCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCcccCccceeeecCCCCCe
Confidence            9 89999999999964  2345799999999999999999999999999999999999876522 222356789999999


Q ss_pred             EEEEEccC
Q 038621          460 IRLAQKSK  467 (477)
Q Consensus       460 v~~~~r~~  467 (477)
                      |++++|++
T Consensus       509 ~~~~~~~~  516 (516)
T PLN02290        509 VCLKPLNP  516 (516)
T ss_pred             EEEEeCCC
Confidence            99999975


No 10 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=2.8e-73  Score=562.37  Aligned_cols=462  Identities=22%  Similarity=0.326  Sum_probs=363.9

Q ss_pred             CCchhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCccccccccchhcc--ccCchHHHHHHHHhhCCeEEEeecC
Q 038621            1 MDFTFLFLLPFASICFILCFYLFLKFISSNGRNLPLPPGTLGWPYIGETFELY--SQNPNVFFASKVKRYGSIFKTHILG   78 (477)
Q Consensus         1 m~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~~~~~~ppgp~~~P~~G~~~~~~--~~~~~~~~~~~~~~yG~i~~i~~~~   78 (477)
                      |+.+.+++++++++++++++++.+.......+..+.||||+++|++||++.+.  ..+++.++.+++++||++|++++|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~   80 (519)
T PLN00168          1 MDATQLLLLAALLLLPLLLLLLGKHGGRGGKKGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGS   80 (519)
T ss_pred             CcHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCC
Confidence            67777777766666655555554433333445567899999999999997652  2357889999999999999999999


Q ss_pred             ccEEEEcCHHHHHHHHhhCCcccccCchhhhhhhhcC-Cceee--cCChhHHHhHH-HHHhcCCHHHHHhhHHHHHHHHH
Q 038621           79 CPCVMISSPEAAKFVLVTRAHLFKPTFPASKERMIGK-QAIFF--HQGDYHIKLRK-LVLRAFMPEAIKNIIPDIECIAK  154 (477)
Q Consensus        79 ~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~~~~g~-~~~~~--~~g~~w~~~R~-~~~~~~~~~~l~~~~~~~~~~~~  154 (477)
                      .++|+++||+++++++.++...|..++......++|. .+++.  .+|+.|+++|+ ++.+.|+.++++++.+.+.+.++
T Consensus        81 ~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~  160 (519)
T PLN00168         81 RLSVFVADRRLAHAALVERGAALADRPAVASSRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRR  160 (519)
T ss_pred             ccEEEECCHHHHHHHHHhcCCccccCCcccchhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence            9999999999999999988777776544333334452 23443  68999999886 78999999999999999999999


Q ss_pred             HHHHHhc-----CCcccHHHHHHHHHHHHHHHHhcCCCchhhH-HHHHHHHHHHh---hc----ccccCccC---CChhh
Q 038621          155 DSLQSWQ-----GRLINTYQEMKIYTFNVALLSIFGKDEVLYR-EDLKRCYYILE---KG----YNSMPINL---PGTLF  218 (477)
Q Consensus       155 ~~l~~~~-----~~~v~~~~~~~~~~~~~~~~~~fG~~~~~~~-~~~~~~~~~~~---~~----~~~~~~~~---p~~~~  218 (477)
                      ++++.+.     ++.+|+.+.++.++.++++.++||.+.+... ..+......+.   ..    ...+|.+.   ....+
T Consensus       161 ~l~~~l~~~~~~~~~v~~~~~~~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~  240 (519)
T PLN00168        161 VLVDKLRREAEDAAAPRVVETFQYAMFCLLVLMCFGERLDEPAVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRL  240 (519)
T ss_pred             HHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHcCCCcChhhHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHH
Confidence            9998882     2467899999999999999999998654321 22222222211   11    11122211   11123


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcc------c--------CCCChHHhhhhcC------CCCCHHHHHHHHHHHHhhccc
Q 038621          219 HKSMKARKELAQIVAKIISTRRQMK------L--------DHNDLLGSFMGAK------EGLTDEQIADNIIGVIFAARD  278 (477)
Q Consensus       219 ~~~~~~~~~~~~~~~~~i~~~~~~~------~--------~~~d~l~~ll~~~------~~~~~~~i~~~~~~~~~ag~~  278 (477)
                      ++..+..+++.+++.++++++++..      +        ...|+++.+++..      ..++++++.+++.++++||+|
T Consensus       241 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~d  320 (519)
T PLN00168        241 QKALALRRRQKELFVPLIDARREYKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTD  320 (519)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcch
Confidence            3455677888888888888775431      0        1358999998642      248999999999999999999


Q ss_pred             chHHHHHHHHHHHhcChhHHHHHHHHHHHHhhhcccCCccccCChhhcCCCchHHHHHHhhhcCCCCcccc-ceeeeccc
Q 038621          279 TTASALTWIVKYLGENPGVLQAVTEEQEAIIKSKEKSGEEEVLSWADTKKMPITSRVIQETLRVASILSFT-FREAVEDV  357 (477)
Q Consensus       279 tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~d~  357 (477)
                      ||+++++|++++|++||++|+|+++|+++++++..     ..++.+++++||||+|||+|+||++|++++. +|.+.+|+
T Consensus       321 TTa~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~-----~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~  395 (519)
T PLN00168        321 TTSTALQWIMAELVKNPSIQSKLHDEIKAKTGDDQ-----EEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDM  395 (519)
T ss_pred             HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCC-----CCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCc
Confidence            99999999999999999999999999999985421     4589999999999999999999999999875 69999999


Q ss_pred             eeCCEEeCCCCEEeecccccccCCCCCCCCCCCCCCCCCCCC----------CCCCccccCCCCCCCccHHHHHHHHHHH
Q 038621          358 EYEGYLIPKGWKVLPLFRNIHHSPEIFPDPEKFDPSRFEVSP----------KPNTFMPFGNGTHSCPGNELAKLEILVL  427 (477)
Q Consensus       358 ~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~~----------~~~~~~~Fg~G~r~C~G~~lA~~~~~~~  427 (477)
                      +++||.|||||.|.++.+++||||++|+||++|+||||+++.          .+..++|||.|+|.|+|+++|++|++++
T Consensus       396 ~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~  475 (519)
T PLN00168        396 EVGGYLIPKGATVNFMVAEMGRDEREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYF  475 (519)
T ss_pred             cCCCEEECCCCEEEEChHHHhcCccccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999631          2357999999999999999999999999


Q ss_pred             HHHHHhcCeEEEecCCC-ccc--ccccccCCCCccEEEEEccC
Q 038621          428 LHHLTTKYRWTVVGTNT-GIQ--YGPFALPMNGLPIRLAQKSK  467 (477)
Q Consensus       428 l~~ll~~f~~~~~~~~~-~~~--~~~~~~~~~~~~v~~~~r~~  467 (477)
                      ++.|+++|+|++.++.. ...  .+.+..+++++++++++|+.
T Consensus       476 la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~  518 (519)
T PLN00168        476 VANMVREFEWKEVPGDEVDFAEKREFTTVMAKPLRARLVPRRT  518 (519)
T ss_pred             HHHHHHHccceeCCCCcCChhhhceeEEeecCCcEEEEEeccC
Confidence            99999999999976532 211  23466777789999998863


No 11 
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=3.1e-73  Score=561.71  Aligned_cols=409  Identities=26%  Similarity=0.415  Sum_probs=333.5

Q ss_pred             HhhcCCCCCCCCCCCccccccccchhccccCchHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHhhCCcccccCc
Q 038621           26 FISSNGRNLPLPPGTLGWPYIGETFELYSQNPNVFFASKVKRYGSIFKTHILGCPCVMISSPEAAKFVLVTRAHLFKPTF  105 (477)
Q Consensus        26 ~~~~~~~~~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~yG~i~~i~~~~~~~vvv~~~~~~~~il~~~~~~~~~~~  105 (477)
                      .+.+..+..+.||||+++|++|+++.+ ...++.++.+++++||++|++++++.++|+++||+++++++.++...|..+.
T Consensus        27 ~~~~~~~~~~~ppgp~~~Pl~G~l~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~  105 (516)
T PLN02183         27 LISRLRRRLPYPPGPKGLPIIGNMLMM-DQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRP  105 (516)
T ss_pred             HHhhccCCCCCCcCCCCCCeeccHHhc-CCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCC
Confidence            344444456789999999999999876 4557788999999999999999999999999999999999998776666553


Q ss_pred             hhh-hhhhhc--CCceeecCChhHHHhHHH-HHhcCCHHHHHhhHHHHHHHHHHHHHHh---cCCcccHHHHHHHHHHHH
Q 038621          106 PAS-KERMIG--KQAIFFHQGDYHIKLRKL-VLRAFMPEAIKNIIPDIECIAKDSLQSW---QGRLINTYQEMKIYTFNV  178 (477)
Q Consensus       106 ~~~-~~~~~g--~~~~~~~~g~~w~~~R~~-~~~~~~~~~l~~~~~~~~~~~~~~l~~~---~~~~v~~~~~~~~~~~~~  178 (477)
                      ... .....+  ..++++.+|+.|+++|++ +.+.|+.+.++.+.+. .++++.+++.+   .++++|+.+++..+++++
T Consensus       106 ~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~v  184 (516)
T PLN02183        106 ANIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASV-RDEVDSMVRSVSSNIGKPVNIGELIFTLTRNI  184 (516)
T ss_pred             cccchhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHH
Confidence            321 112222  356777899999999998 5789999999888875 45788888888   266899999999999999


Q ss_pred             HHHHhcCCCchhhHHHHHHHHHHHhhcc------cccCcc--C-CChhhHHHHHHHHHHHHHHHHHHHHHHhc---c---
Q 038621          179 ALLSIFGKDEVLYREDLKRCYYILEKGY------NSMPIN--L-PGTLFHKSMKARKELAQIVAKIISTRRQM---K---  243 (477)
Q Consensus       179 ~~~~~fG~~~~~~~~~~~~~~~~~~~~~------~~~~~~--~-p~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~---  243 (477)
                      +++++||.+.+...+.+.+.+..+...+      ..+|+.  + +....++..+.++.+.+++.+.++++.+.   .   
T Consensus       185 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  264 (516)
T PLN02183        185 TYRAAFGSSSNEGQDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNAD  264 (516)
T ss_pred             HHhHhhcCcccchHHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence            9999999865444444555444433221      112221  1 21223455566777888888877766432   1   


Q ss_pred             ----cCCCChHHhhhhcC---------------CCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcChhHHHHHHHH
Q 038621          244 ----LDHNDLLGSFMGAK---------------EGLTDEQIADNIIGVIFAARDTTASALTWIVKYLGENPGVLQAVTEE  304 (477)
Q Consensus       244 ----~~~~d~l~~ll~~~---------------~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~E  304 (477)
                          ....|+++.+++..               ..++++++.+++.++++||+|||+.+++|++++|++||++|+|+++|
T Consensus       265 ~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~E  344 (516)
T PLN02183        265 NDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQE  344 (516)
T ss_pred             cccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence                12358999988631               14789999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhcccCCccccCChhhcCCCchHHHHHHhhhcCCCCccccceeeeccceeCCEEeCCCCEEeecccccccCCCCC
Q 038621          305 QEAIIKSKEKSGEEEVLSWADTKKMPITSRVIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSPEIF  384 (477)
Q Consensus       305 i~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~  384 (477)
                      ++++++..      ..++.+++++|||++|||+|+||++|++|+..|++.+|++++||.|||||.|.++.|++||||++|
T Consensus       345 i~~v~~~~------~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~  418 (516)
T PLN02183        345 LADVVGLN------RRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSW  418 (516)
T ss_pred             HHHHcCCC------CCCCHHHhccChHHHHHHHHHhccCCCccceeeeccCceeECCEEECCCCEEEEehhhhcCCcccc
Confidence            99998531      458999999999999999999999999998889999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCC------CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCeEEEecC
Q 038621          385 PDPEKFDPSRFEVSP------KPNTFMPFGNGTHSCPGNELAKLEILVLLHHLTTKYRWTVVGT  442 (477)
Q Consensus       385 ~~p~~F~PeR~l~~~------~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~  442 (477)
                      +||++|+||||+++.      ....++|||+|+|.|+|+++|++|+++++|.|+++|++++.++
T Consensus       419 ~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~  482 (516)
T PLN02183        419 EDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDG  482 (516)
T ss_pred             CCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCC
Confidence            999999999999642      3457999999999999999999999999999999999998765


No 12 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=1.1e-72  Score=548.06  Aligned_cols=433  Identities=34%  Similarity=0.662  Sum_probs=355.0

Q ss_pred             cCCCCCCCCCCCccccccccchhccc----cCchHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHhhCCcccccC
Q 038621           29 SNGRNLPLPPGTLGWPYIGETFELYS----QNPNVFFASKVKRYGSIFKTHILGCPCVMISSPEAAKFVLVTRAHLFKPT  104 (477)
Q Consensus        29 ~~~~~~~~ppgp~~~P~~G~~~~~~~----~~~~~~~~~~~~~yG~i~~i~~~~~~~vvv~~~~~~~~il~~~~~~~~~~  104 (477)
                      ....+.+.||||.++|++||++.+..    .+++.++.+++++||++|+++++++++|+++||++++++++++...|..+
T Consensus        24 ~~~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~  103 (472)
T PLN02987         24 TRYRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECS  103 (472)
T ss_pred             hccCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEec
Confidence            33455568999999999999988742    46889999999999999999999999999999999999999887777555


Q ss_pred             chhhhhhhhcCCceeecCChhHHHhHHHHHhcCCHHHHHhhH-HHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHh
Q 038621          105 FPASKERMIGKQAIFFHQGDYHIKLRKLVLRAFMPEAIKNII-PDIECIAKDSLQSWQGRLINTYQEMKIYTFNVALLSI  183 (477)
Q Consensus       105 ~~~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~~~~~l~~~~-~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~  183 (477)
                      +......++|+.++++.+|+.|+++|+++.+.++...++.+. ..+.+.++..+++|. +++++.+.+.+++++++++++
T Consensus       104 ~~~~~~~~lg~~~l~~~~g~~wr~~R~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~t~~vi~~~~  182 (472)
T PLN02987        104 YPGSISNLLGKHSLLLMKGNLHKKMHSLTMSFANSSIIKDHLLLDIDRLIRFNLDSWS-SRVLLMEEAKKITFELTVKQL  182 (472)
T ss_pred             CcHHHHHHhCcccccccCcHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhhc-cceehHHHHHHHHHHHHHHHH
Confidence            444445666766888889999999999987655555555543 234455555566663 468999999999999999999


Q ss_pred             cCCCchhhHHHHHHHHHHHhhcccccCccCCChhhHHHHHHHHHHHHHHHHHHHHHHhcc----cCCCChHHhhhhcCCC
Q 038621          184 FGKDEVLYREDLKRCYYILEKGYNSMPINLPGTLFHKSMKARKELAQIVAKIISTRRQMK----LDHNDLLGSFMGAKEG  259 (477)
Q Consensus       184 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~d~l~~ll~~~~~  259 (477)
                      ||.+..+..+.+.+.+......+...++.+....+++..++++++.+++.+.++++++..    ....|+++.+++..++
T Consensus       183 fg~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l~~ll~~~~~  262 (472)
T PLN02987        183 MSFDPGEWTESLRKEYVLVIEGFFSVPLPLFSTTYRRAIQARTKVAEALTLVVMKRRKEEEEGAEKKKDMLAALLASDDG  262 (472)
T ss_pred             cCCCChHHHHHHHHHHHHHHhhhhcCCCcCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhccCcccccHHHHHHhcCCC
Confidence            998654433444444433332222222211123356778889999999999999887642    1347999999987667


Q ss_pred             CCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcChhHHHHHHHHHHHHhhhcccCCccccCChhhcCCCchHHHHHHhh
Q 038621          260 LTDEQIADNIIGVIFAARDTTASALTWIVKYLGENPGVLQAVTEEQEAIIKSKEKSGEEEVLSWADTKKMPITSRVIQET  339 (477)
Q Consensus       260 ~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~  339 (477)
                      ++++++.+++.++++||+|||+.+++|++++|+.||++|+++++|++++.+... .+  ..++++++++|||++||++|+
T Consensus       263 ~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~-~~--~~~~~~~l~~lpyl~a~i~Et  339 (472)
T PLN02987        263 FSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKS-DS--YSLEWSDYKSMPFTQCVVNET  339 (472)
T ss_pred             CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccC-CC--CCCCHHHHhcChHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999875321 11  457899999999999999999


Q ss_pred             hcCCCCccccceeeeccceeCCEEeCCCCEEeecccccccCCCCCCCCCCCCCCCCCCC----CCCCCccccCCCCCCCc
Q 038621          340 LRVASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSPEIFPDPEKFDPSRFEVS----PKPNTFMPFGNGTHSCP  415 (477)
Q Consensus       340 lRl~p~~~~~~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~----~~~~~~~~Fg~G~r~C~  415 (477)
                      ||++|+++.+.|.+.+|++++||.||||+.|+++.+.+|+||++|+||++|+||||+++    .....++|||+|+|.|+
T Consensus       340 LRl~p~~~~~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~l~FG~G~r~C~  419 (472)
T PLN02987        340 LRVANIIGGIFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGTTVPSNVFTPFGGGPRLCP  419 (472)
T ss_pred             HHccCCcCCccccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCCCCCCcceECCCCCCcCCC
Confidence            99999999888999999999999999999999999999999999999999999999964    22467999999999999


Q ss_pred             cHHHHHHHHHHHHHHHHhcCeEEEecCCCcccccccccCCCCccEEEEEcc
Q 038621          416 GNELAKLEILVLLHHLTTKYRWTVVGTNTGIQYGPFALPMNGLPIRLAQKS  466 (477)
Q Consensus       416 G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  466 (477)
                      |+++|..|++++++.|+++|++++.+++ +....++.+|.+++++++++|.
T Consensus       420 G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~~~~~~p~~~~~~~~~~r~  469 (472)
T PLN02987        420 GYELARVALSVFLHRLVTRFSWVPAEQD-KLVFFPTTRTQKRYPINVKRRD  469 (472)
T ss_pred             cHHHHHHHHHHHHHHHHhceEEEECCCC-ceeecccccCCCCceEEEEecc
Confidence            9999999999999999999999997665 3445678999999999999984


No 13 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=2.6e-73  Score=559.38  Aligned_cols=426  Identities=22%  Similarity=0.337  Sum_probs=342.7

Q ss_pred             CCCCCCCCCCccccccccchhccccCchHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHhhCCcccccCch-hh-
Q 038621           31 GRNLPLPPGTLGWPYIGETFELYSQNPNVFFASKVKRYGSIFKTHILGCPCVMISSPEAAKFVLVTRAHLFKPTFP-AS-  108 (477)
Q Consensus        31 ~~~~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~yG~i~~i~~~~~~~vvv~~~~~~~~il~~~~~~~~~~~~-~~-  108 (477)
                      +...+.+|||+++|++||++.+ ..+++.++.+++++||++|++++|+.++|+++||+++++++.++...|..+.. .. 
T Consensus        25 ~~~~~~~pgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~  103 (482)
T PTZ00404         25 KIHKNELKGPIPIPILGNLHQL-GNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSI  103 (482)
T ss_pred             hccCCCCCCCCCCCeeccHhhh-cccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCccee
Confidence            3456678999999999999988 46899999999999999999999999999999999999999876655544322 11 


Q ss_pred             hhhhhcCCceeecCChhHHHhHHHHHhcCCHHHHHhhHHHHHHHHHHHHHHh-----cCCcccHHHHHHHHHHHHHHHHh
Q 038621          109 KERMIGKQAIFFHQGDYHIKLRKLVLRAFMPEAIKNIIPDIECIAKDSLQSW-----QGRLINTYQEMKIYTFNVALLSI  183 (477)
Q Consensus       109 ~~~~~g~~~~~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~-----~~~~v~~~~~~~~~~~~~~~~~~  183 (477)
                      ....+| .|+++.+|+.|+++|+++.+.|+.+.++++.+.+.+.++++++.+     .++.+|+.+++.++++++++.++
T Consensus       104 ~~~~~~-~~l~~~~g~~w~~~Rk~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~  182 (482)
T PTZ00404        104 KHGTFY-HGIVTSSGEYWKRNREIVGKAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAMFKYI  182 (482)
T ss_pred             eeeccC-CceeccChHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHH
Confidence            112234 788889999999999999999999999999999999999998877     25579999999999999999999


Q ss_pred             cCCCchhh-------HHHHHHHHHHHhhcccc------cCccCCCh--hhHHHHHHHHHHHHHHHHHHHHHHhc--ccCC
Q 038621          184 FGKDEVLY-------REDLKRCYYILEKGYNS------MPINLPGT--LFHKSMKARKELAQIVAKIISTRRQM--KLDH  246 (477)
Q Consensus       184 fG~~~~~~-------~~~~~~~~~~~~~~~~~------~~~~~p~~--~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~  246 (477)
                      ||.+....       ...+.+....+......      ++...+..  ......+..+.+.+++.+.++++++.  ....
T Consensus       183 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  262 (482)
T PTZ00404        183 FNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLYYQYLEHTDKNFKKIKKFIKEKYHEHLKTIDPEVP  262 (482)
T ss_pred             hccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCc
Confidence            99864321       12333333332221110      11111110  11222345566777777777766543  2235


Q ss_pred             CChHHhhhhcCCCCCHH---HHHHHHHHHHhhcccchHHHHHHHHHHHhcChhHHHHHHHHHHHHhhhcccCCccccCCh
Q 038621          247 NDLLGSFMGAKEGLTDE---QIADNIIGVIFAARDTTASALTWIVKYLGENPGVLQAVTEEQEAIIKSKEKSGEEEVLSW  323 (477)
Q Consensus       247 ~d~l~~ll~~~~~~~~~---~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~  323 (477)
                      .|+++.++++.+..+++   ++.+++.++++||+|||+++++|++++|++||++|+|+++|+++++++.      ..+++
T Consensus       263 ~dll~~ll~~~~~~~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~------~~~~~  336 (482)
T PTZ00404        263 RDLLDLLIKEYGTNTDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGR------NKVLL  336 (482)
T ss_pred             ccHHHHHHHHhccCCcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCC------CCCCc
Confidence            79999999764333333   4889999999999999999999999999999999999999999998642      45789


Q ss_pred             hhcCCCchHHHHHHhhhcCCCCccc-cceeeecccee-CCEEeCCCCEEeecccccccCCCCCCCCCCCCCCCCCCCCCC
Q 038621          324 ADTKKMPITSRVIQETLRVASILSF-TFREAVEDVEY-EGYLIPKGWKVLPLFRNIHHSPEIFPDPEKFDPSRFEVSPKP  401 (477)
Q Consensus       324 ~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~i-~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~~~~  401 (477)
                      +++++|||++|||+|+||++|++|. ++|.+.+|+++ +||.|||||.|.++.+++||||++|+||++|+||||++...+
T Consensus       337 ~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~~~~~  416 (482)
T PTZ00404        337 SDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLNPDSN  416 (482)
T ss_pred             cccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccCCCCCC
Confidence            9999999999999999999999996 57999999999 999999999999999999999999999999999999987677


Q ss_pred             CCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCeEEEecCCCc-c--cccccccCCCCccEEEEEc
Q 038621          402 NTFMPFGNGTHSCPGNELAKLEILVLLHHLTTKYRWTVVGTNTG-I--QYGPFALPMNGLPIRLAQK  465 (477)
Q Consensus       402 ~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~-~--~~~~~~~~~~~~~v~~~~r  465 (477)
                      ..++|||.|+|.|+|+++|++|++++++.|+++|++++.+++.. .  ..+.+.. +.++.|++++|
T Consensus       417 ~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~R  482 (482)
T PTZ00404        417 DAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKIDETEEYGLTLK-PNKFKVLLEKR  482 (482)
T ss_pred             CceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCCCcccccceeec-CCCceeeeecC
Confidence            89999999999999999999999999999999999998655321 1  2244455 45799999876


No 14 
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=9.3e-73  Score=558.39  Aligned_cols=429  Identities=24%  Similarity=0.367  Sum_probs=347.9

Q ss_pred             CCCCCCCCCCccccccccchhccccCchHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHhhCCcccccCchhhhh
Q 038621           31 GRNLPLPPGTLGWPYIGETFELYSQNPNVFFASKVKRYGSIFKTHILGCPCVMISSPEAAKFVLVTRAHLFKPTFPASKE  110 (477)
Q Consensus        31 ~~~~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~yG~i~~i~~~~~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~  110 (477)
                      ++..+.||||.++|++||++.+ ..+++.++.+++++||++|++++|+.++|+++||+++++++.++...|..+......
T Consensus        30 ~~~~~~pPgp~~~P~iG~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~  108 (517)
T PLN02687         30 KHKRPLPPGPRGWPVLGNLPQL-GPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGA  108 (517)
T ss_pred             CCCCCCCccCCCCCccccHHhc-CCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccch
Confidence            3455689999999999999888 467999999999999999999999999999999999999999877667765432222


Q ss_pred             hhh---cCCceeecCChhHHHhHHHHH-hcCCHHHHHhhHHHHHHHHHHHHHHhc----CCcccHHHHHHHHHHHHHHHH
Q 038621          111 RMI---GKQAIFFHQGDYHIKLRKLVL-RAFMPEAIKNIIPDIECIAKDSLQSWQ----GRLINTYQEMKIYTFNVALLS  182 (477)
Q Consensus       111 ~~~---g~~~~~~~~g~~w~~~R~~~~-~~~~~~~l~~~~~~~~~~~~~~l~~~~----~~~v~~~~~~~~~~~~~~~~~  182 (477)
                      ..+   +..+++..+|+.|+++|+.+. +.|+.++++++.+.++++++++++.+.    ++++|+.++++.+++|+++..
T Consensus       109 ~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~t~dvi~~~  188 (517)
T PLN02687        109 EHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQHGTAPVNLGQLVNVCTTNALGRA  188 (517)
T ss_pred             hhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHH
Confidence            222   234556668999999999998 799999999999999999999998882    457999999999999999999


Q ss_pred             hcCCCch-----hhHHHHHHHHHHHhhcc------cccCc--cCCC-hhhHHHHHHHHHHHHHHHHHHHHHHhcc----c
Q 038621          183 IFGKDEV-----LYREDLKRCYYILEKGY------NSMPI--NLPG-TLFHKSMKARKELAQIVAKIISTRRQMK----L  244 (477)
Q Consensus       183 ~fG~~~~-----~~~~~~~~~~~~~~~~~------~~~~~--~~p~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~  244 (477)
                      +||.+..     .....+.+.+..+....      ..+|.  +++. ...++..+..+.+.+++.+.++++++..    .
T Consensus       189 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~  268 (517)
T PLN02687        189 MVGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQTGSE  268 (517)
T ss_pred             HhCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhccccCc
Confidence            9997632     12234444444333211      11221  1111 1123455667788889999999887642    2


Q ss_pred             CCCChHHhhhhcC---------CCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcChhHHHHHHHHHHHHhhhcccC
Q 038621          245 DHNDLLGSFMGAK---------EGLTDEQIADNIIGVIFAARDTTASALTWIVKYLGENPGVLQAVTEEQEAIIKSKEKS  315 (477)
Q Consensus       245 ~~~d~l~~ll~~~---------~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~  315 (477)
                      ...|+++.+++..         ..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++++..   
T Consensus       269 ~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~---  345 (517)
T PLN02687        269 EHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGRD---  345 (517)
T ss_pred             ccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCC---
Confidence            3469999998642         2488999999999999999999999999999999999999999999999987542   


Q ss_pred             CccccCChhhcCCCchHHHHHHhhhcCCCCccc-cceeeeccceeCCEEeCCCCEEeecccccccCCCCCCCCCCCCCCC
Q 038621          316 GEEEVLSWADTKKMPITSRVIQETLRVASILSF-TFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSPEIFPDPEKFDPSR  394 (477)
Q Consensus       316 ~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeR  394 (477)
                         ..++.+++++||||+|||+|+||++|+++. ++|.+.+|++++||.|||||.|.++.|++||||++|+||++|+|||
T Consensus       346 ---~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeR  422 (517)
T PLN02687        346 ---RLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDR  422 (517)
T ss_pred             ---CCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchh
Confidence               458999999999999999999999999996 5799999999999999999999999999999999999999999999


Q ss_pred             CCCCC---------CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCeEEEecCCC--ccc----ccccccCCCCcc
Q 038621          395 FEVSP---------KPNTFMPFGNGTHSCPGNELAKLEILVLLHHLTTKYRWTVVGTNT--GIQ----YGPFALPMNGLP  459 (477)
Q Consensus       395 ~l~~~---------~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~--~~~----~~~~~~~~~~~~  459 (477)
                      |+++.         .+..++|||+|+|.|+|+++|++|+++++|.|+++|++++.++..  ...    .+....+..++.
T Consensus       423 fl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  502 (517)
T PLN02687        423 FLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLM  502 (517)
T ss_pred             cCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccceeeecCCCeE
Confidence            99631         234789999999999999999999999999999999999876532  221    233344555677


Q ss_pred             EEEEEcc
Q 038621          460 IRLAQKS  466 (477)
Q Consensus       460 v~~~~r~  466 (477)
                      +++++|.
T Consensus       503 ~~~~~R~  509 (517)
T PLN02687        503 VHPRPRL  509 (517)
T ss_pred             EeeccCC
Confidence            7777774


No 15 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=4.5e-74  Score=559.45  Aligned_cols=428  Identities=31%  Similarity=0.497  Sum_probs=348.4

Q ss_pred             CCCCCCCCccccccccchhcccc--CchHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHhhCCccc--ccCchhh
Q 038621           33 NLPLPPGTLGWPYIGETFELYSQ--NPNVFFASKVKRYGSIFKTHILGCPCVMISSPEAAKFVLVTRAHLF--KPTFPAS  108 (477)
Q Consensus        33 ~~~~ppgp~~~P~~G~~~~~~~~--~~~~~~~~~~~~yG~i~~i~~~~~~~vvv~~~~~~~~il~~~~~~~--~~~~~~~  108 (477)
                      +...||||.+||++|++..+...  +...++.++..+||++|+.|+||.++|+++||+.+++|+.++....  ...+...
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            55689999999999999988543  5667889999999999999999999999999999999996443322  3344457


Q ss_pred             hhhhhcCCceeecCChhHHHhHHHHHhcCCHHHHHhhHHHHHHHHHHHHHHh---c-CCcccHHHHHHHHHHHHHHHHhc
Q 038621          109 KERMIGKQAIFFHQGDYHIKLRKLVLRAFMPEAIKNIIPDIECIAKDSLQSW---Q-GRLINTYQEMKIYTFNVALLSIF  184 (477)
Q Consensus       109 ~~~~~g~~~~~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~---~-~~~v~~~~~~~~~~~~~~~~~~f  184 (477)
                      +..++| .|+++++|+.|.++|+++.+.|+.+.++.+...+.+.+..+...+   . ++.+|+.+.+.++++|+++.++|
T Consensus       113 ~~~~lG-~gll~~~g~~W~~~Rk~~~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~tld~i~~~~~  191 (497)
T KOG0157|consen  113 LKPWLG-DGLLFSDGEKWHKHRKLLTPAFHFEILKSFVPVFIESSLILLLLLELAASGEEVDLQDLLKRLTLDIICKTAM  191 (497)
T ss_pred             HHHHhc-CccccCCchHHHHHHhhccHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEcHHHHHHHHHHHHHHHHhc
Confidence            888999 599999999999999999999999999999888888777766554   2 33399999999999999999999


Q ss_pred             CCCc-hhh---HHHHHHHHHHHhhc---ccccCc---cCCCh-hhHHHHHHHHHHHHHHHHHHHHHHhc----c----cC
Q 038621          185 GKDE-VLY---REDLKRCYYILEKG---YNSMPI---NLPGT-LFHKSMKARKELAQIVAKIISTRRQM----K----LD  245 (477)
Q Consensus       185 G~~~-~~~---~~~~~~~~~~~~~~---~~~~~~---~~p~~-~~~~~~~~~~~~~~~~~~~i~~~~~~----~----~~  245 (477)
                      |... ...   ......++......   ....|.   ++... ..++..++.+.+++.++++|++|+++    .    .+
T Consensus       192 G~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~~~~~~~~  271 (497)
T KOG0157|consen  192 GPESLDAEGPELFEYVQAFDDLTELISKRINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEKEGSGEEKK  271 (497)
T ss_pred             CCccccccCCcccHHHHHHHHHHHHHHHHHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccch
Confidence            9321 111   11222333222111   111221   01111 34566778999999999999998864    1    23


Q ss_pred             CCChHHhh-hhcCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcChhHHHHHHHHHHHHhhhcccCCccccCChh
Q 038621          246 HNDLLGSF-MGAKEGLTDEQIADNIIGVIFAARDTTASALTWIVKYLGENPGVLQAVTEEQEAIIKSKEKSGEEEVLSWA  324 (477)
Q Consensus       246 ~~d~l~~l-l~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~  324 (477)
                      ..|+++.+ .+....++++++.+++.++++||+|||+++++|+++.|+.||++|+|+++|++++++...     ...+..
T Consensus       272 ~~d~L~~~~~~~~~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~-----~~~~~~  346 (497)
T KOG0157|consen  272 RLDFLDTLLLEEDKPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRD-----DKWEVE  346 (497)
T ss_pred             hhhHHHHHHHhccCCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCC-----CCCChh
Confidence            46788843 333347899999999999999999999999999999999999999999999999987532     112222


Q ss_pred             hcCCCchHHHHHHhhhcCCCCccccceeeeccceeC-CEEeCCCCEEeecccccccCCCCCC-CCCCCCCCCCCCC----
Q 038621          325 DTKKMPITSRVIQETLRVASILSFTFREAVEDVEYE-GYLIPKGWKVLPLFRNIHHSPEIFP-DPEKFDPSRFEVS----  398 (477)
Q Consensus       325 ~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~i~-g~~ip~G~~v~~~~~~~~~d~~~~~-~p~~F~PeR~l~~----  398 (477)
                      +.++|+|+++||+||||||||+|++.|.+.+|++++ ||.||||+.|.++.+++|||+.+|+ ||++||||||+++    
T Consensus       347 ~~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~~~~~~  426 (497)
T KOG0157|consen  347 KLDQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLDGEEKA  426 (497)
T ss_pred             hhhhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCCCCCcC
Confidence            333699999999999999999999999999999995 8999999999999999999999996 9999999999953    


Q ss_pred             -CCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCeEEEecCC-CcccccccccCCCCccEEEEEcc
Q 038621          399 -PKPNTFMPFGNGTHSCPGNELAKLEILVLLHHLTTKYRWTVVGTN-TGIQYGPFALPMNGLPIRLAQKS  466 (477)
Q Consensus       399 -~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~r~  466 (477)
                       .++..|+|||+|+|.|+|+++|++|+|++++.|+++|++++..+. .......+.+|.+|++|++++|.
T Consensus       427 ~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~~~~~~~~~l~~~~gl~v~~~~r~  496 (497)
T KOG0157|consen  427 KRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDKPKPVPELTLRPKNGLKVKLRPRG  496 (497)
T ss_pred             CCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCCceeeeEEEEEecCCeEEEEEeCC
Confidence             346899999999999999999999999999999999999998776 34556889999999999999985


No 16 
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=3.4e-72  Score=553.86  Aligned_cols=428  Identities=24%  Similarity=0.363  Sum_probs=344.1

Q ss_pred             CCCCCCCCCCccccccccchhccccCchHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHhhCCcccccCchhhhh
Q 038621           31 GRNLPLPPGTLGWPYIGETFELYSQNPNVFFASKVKRYGSIFKTHILGCPCVMISSPEAAKFVLVTRAHLFKPTFPASKE  110 (477)
Q Consensus        31 ~~~~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~yG~i~~i~~~~~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~  110 (477)
                      .++.+.||||+++|++||++.+...+++.++.+++++||++|++++|+.++|+++||+++++++.++...|..+......
T Consensus        24 ~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~  103 (499)
T PLN03234         24 KKSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQ  103 (499)
T ss_pred             CCCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhh
Confidence            34457899999999999999884347889999999999999999999999999999999999999877667655432111


Q ss_pred             h---hhcCCceeecCChhHHHhHHHH-HhcCCHHHHHhhHHHHHHHHHHHHHHh-----cCCcccHHHHHHHHHHHHHHH
Q 038621          111 R---MIGKQAIFFHQGDYHIKLRKLV-LRAFMPEAIKNIIPDIECIAKDSLQSW-----QGRLINTYQEMKIYTFNVALL  181 (477)
Q Consensus       111 ~---~~g~~~~~~~~g~~w~~~R~~~-~~~~~~~~l~~~~~~~~~~~~~~l~~~-----~~~~v~~~~~~~~~~~~~~~~  181 (477)
                      .   ..|....+...++.|+++|+.+ .+.|+++++..+.+.+++.++++++.+     .++++|+.+.+..+++++++.
T Consensus       104 ~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~dvi~~  183 (499)
T PLN03234        104 QTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVVCR  183 (499)
T ss_pred             hhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHHHHHHH
Confidence            1   1121112334678999999985 689999999999999999999999987     256899999999999999999


Q ss_pred             HhcCCCchhhH---HHHHHHHHHHhhccc------ccCcc-----CCChhhHHHHHHHHHHHHHHHHHHHHHHhcc---c
Q 038621          182 SIFGKDEVLYR---EDLKRCYYILEKGYN------SMPIN-----LPGTLFHKSMKARKELAQIVAKIISTRRQMK---L  244 (477)
Q Consensus       182 ~~fG~~~~~~~---~~~~~~~~~~~~~~~------~~~~~-----~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~  244 (477)
                      ++||.+.+...   ..+.+.+........      .+|.+     +++ ..++..++.+.+.+++.+.++++++..   .
T Consensus       184 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  262 (499)
T PLN03234        184 QAFGKRYNEYGTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTG-LSARLKKAFKELDTYLQELLDETLDPNRPKQ  262 (499)
T ss_pred             HHhCCcccccchhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhh-HHHHHHHHHHHHHHHHHHHHHHHHhhcccCC
Confidence            99998654322   223333222221111      11111     111 134566788899999999998876431   2


Q ss_pred             CCCChHHhhhhcC------CCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcChhHHHHHHHHHHHHhhhcccCCcc
Q 038621          245 DHNDLLGSFMGAK------EGLTDEQIADNIIGVIFAARDTTASALTWIVKYLGENPGVLQAVTEEQEAIIKSKEKSGEE  318 (477)
Q Consensus       245 ~~~d~l~~ll~~~------~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~  318 (477)
                      ...|+++.+++..      ..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|+++++++.      
T Consensus       263 ~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~------  336 (499)
T PLN03234        263 ETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDK------  336 (499)
T ss_pred             CcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC------
Confidence            3468888887542      1478999999999999999999999999999999999999999999999997542      


Q ss_pred             ccCChhhcCCCchHHHHHHhhhcCCCCcccc-ceeeeccceeCCEEeCCCCEEeecccccccCCCCC-CCCCCCCCCCCC
Q 038621          319 EVLSWADTKKMPITSRVIQETLRVASILSFT-FREAVEDVEYEGYLIPKGWKVLPLFRNIHHSPEIF-PDPEKFDPSRFE  396 (477)
Q Consensus       319 ~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~PeR~l  396 (477)
                      ..++++++++|||++|||+|++|++|++|+. .|.+.+|++++||.|||||.|.++.+.+||||++| +||++|+||||+
T Consensus       337 ~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l  416 (499)
T PLN03234        337 GYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFM  416 (499)
T ss_pred             CCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhc
Confidence            4589999999999999999999999999975 59999999999999999999999999999999999 899999999999


Q ss_pred             CCC-------CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCeEEEecCC--Ccc----cccccccCCCCccEEEE
Q 038621          397 VSP-------KPNTFMPFGNGTHSCPGNELAKLEILVLLHHLTTKYRWTVVGTN--TGI----QYGPFALPMNGLPIRLA  463 (477)
Q Consensus       397 ~~~-------~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~--~~~----~~~~~~~~~~~~~v~~~  463 (477)
                      ++.       .+..++|||+|+|.|+|+++|++|+++++|.|+++|++++.++.  ...    .++.+..|++.+++..+
T Consensus       417 ~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  496 (499)
T PLN03234        417 KEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAPT  496 (499)
T ss_pred             CCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccccccccCCCeEEEee
Confidence            742       24578999999999999999999999999999999999998652  112    23555667777777776


Q ss_pred             Ec
Q 038621          464 QK  465 (477)
Q Consensus       464 ~r  465 (477)
                      +|
T Consensus       497 ~~  498 (499)
T PLN03234        497 KH  498 (499)
T ss_pred             cC
Confidence            65


No 17 
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=4.7e-72  Score=550.01  Aligned_cols=453  Identities=21%  Similarity=0.326  Sum_probs=359.6

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCccccccccchhccccCchHHHHHHHHhhCCeEEEeecCccEEEE
Q 038621            5 FLFLLPFASICFILCFYLFLKFISSNGRNLPLPPGTLGWPYIGETFELYSQNPNVFFASKVKRYGSIFKTHILGCPCVMI   84 (477)
Q Consensus         5 ~~~ll~~~~l~~~~~~~~~~~~~~~~~~~~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~yG~i~~i~~~~~~~vvv   84 (477)
                      .++.|+++.++..+..+++..+  .+++..+.||||+++|++||++.+ ..+++.++.+++++||+||++++|++++|++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~pPgp~~~Pl~G~l~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv   79 (504)
T PLN00110          3 LLLELAAATLLFFITRFFIRSL--LPKPSRKLPPGPRGWPLLGALPLL-GNMPHVALAKMAKRYGPVMFLKMGTNSMVVA   79 (504)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH--hhcccCCCcccCCCCCeeechhhc-CCchHHHHHHHHHHhCCeEEEEcCCccEEEE
Confidence            4556655555544444443333  344555789999999999999877 4678999999999999999999999999999


Q ss_pred             cCHHHHHHHHhhCCcccccCchhh--hhhhhc-CCceeecCChhHHHhHHHHHh-cCCHHHHHhhHHHHHHHHHHHHHHh
Q 038621           85 SSPEAAKFVLVTRAHLFKPTFPAS--KERMIG-KQAIFFHQGDYHIKLRKLVLR-AFMPEAIKNIIPDIECIAKDSLQSW  160 (477)
Q Consensus        85 ~~~~~~~~il~~~~~~~~~~~~~~--~~~~~g-~~~~~~~~g~~w~~~R~~~~~-~~~~~~l~~~~~~~~~~~~~~l~~~  160 (477)
                      +||+++++++.++...|..+....  .....| ..++++.+|+.|+++|+.+.+ .|+++.++.+.+.+.++++++++.+
T Consensus        80 ~dpe~~~~vl~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l  159 (504)
T PLN00110         80 STPEAARAFLKTLDINFSNRPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAM  159 (504)
T ss_pred             CCHHHHHHHHHhcchhhcCCCCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHH
Confidence            999999999998776676654321  112233 356777789999999999985 7999999999999988888877776


Q ss_pred             -----cCCcccHHHHHHHHHHHHHHHHhcCCCc----hhhHHHHHHHHHHHhhcc------cccCc--cCCCh-hhHHHH
Q 038621          161 -----QGRLINTYQEMKIYTFNVALLSIFGKDE----VLYREDLKRCYYILEKGY------NSMPI--NLPGT-LFHKSM  222 (477)
Q Consensus       161 -----~~~~v~~~~~~~~~~~~~~~~~~fG~~~----~~~~~~~~~~~~~~~~~~------~~~~~--~~p~~-~~~~~~  222 (477)
                           +++++|+.+++..+++++++.++||.+.    ....+++.+.+.......      ..+|.  +++.. ..++..
T Consensus       160 ~~~~~~g~~~~~~~~~~~~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~  239 (504)
T PLN00110        160 LELSQRGEPVVVPEMLTFSMANMIGQVILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMK  239 (504)
T ss_pred             HHhccCCCcEeHHHHHHHHHHHHHHHHHhCCcccccCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHH
Confidence                 2567999999999999999999999753    112233444443332211      11221  11211 123344


Q ss_pred             HHHHHHHHHHHHHHHHHHhcc---cCCCChHHhhhhcC-----CCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcC
Q 038621          223 KARKELAQIVAKIISTRRQMK---LDHNDLLGSFMGAK-----EGLTDEQIADNIIGVIFAARDTTASALTWIVKYLGEN  294 (477)
Q Consensus       223 ~~~~~~~~~~~~~i~~~~~~~---~~~~d~l~~ll~~~-----~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~  294 (477)
                      +..+.+.+++.+.++++++..   ....|+++.+++..     ..++++++.+++.++++||+|||+++++|++++|++|
T Consensus       240 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~  319 (504)
T PLN00110        240 HLHKKFDKLLTRMIEEHTASAHERKGNPDFLDVVMANQENSTGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKN  319 (504)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccccccCCChhhHHhhcccccCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhC
Confidence            556777888888888776532   23468999998642     2488999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhhhcccCCccccCChhhcCCCchHHHHHHhhhcCCCCccc-cceeeeccceeCCEEeCCCCEEeec
Q 038621          295 PGVLQAVTEEQEAIIKSKEKSGEEEVLSWADTKKMPITSRVIQETLRVASILSF-TFREAVEDVEYEGYLIPKGWKVLPL  373 (477)
Q Consensus       295 p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~i~g~~ip~G~~v~~~  373 (477)
                      |++|+|+++|++++.+..      ..++++++++|||++|||+|+||++|++|+ ++|.+.+|++++||.|||||.|.++
T Consensus       320 P~~~~kl~~Ei~~~~~~~------~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~  393 (504)
T PLN00110        320 PSILKRAHEEMDQVIGRN------RRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVN  393 (504)
T ss_pred             HHHHHHHHHHHHHHhCCC------CCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEe
Confidence            999999999999997542      458999999999999999999999999997 5699999999999999999999999


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCC--------CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCeEEEecCCCc
Q 038621          374 FRNIHHSPEIFPDPEKFDPSRFEVSP--------KPNTFMPFGNGTHSCPGNELAKLEILVLLHHLTTKYRWTVVGTNTG  445 (477)
Q Consensus       374 ~~~~~~d~~~~~~p~~F~PeR~l~~~--------~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~  445 (477)
                      .+++||||++|+||++|+||||+++.        ....++|||+|+|.|+|+++|.+|+++++|+|+++|++++.++...
T Consensus       394 ~~~~h~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~  473 (504)
T PLN00110        394 IWAIGRDPDVWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGVEL  473 (504)
T ss_pred             HHHhcCChhhcCCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCCcc
Confidence            99999999999999999999999631        1246899999999999999999999999999999999998765321


Q ss_pred             ---ccccccccCCCCccEEEEEcc
Q 038621          446 ---IQYGPFALPMNGLPIRLAQKS  466 (477)
Q Consensus       446 ---~~~~~~~~~~~~~~v~~~~r~  466 (477)
                         ...+.+..|+.++++++++|.
T Consensus       474 ~~~~~~~~~~~~~~~~~~~~~~r~  497 (504)
T PLN00110        474 NMDEAFGLALQKAVPLSAMVTPRL  497 (504)
T ss_pred             CcccccccccccCCCceEeeccCC
Confidence               123556778889999999995


No 18 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=3.2e-71  Score=547.48  Aligned_cols=429  Identities=21%  Similarity=0.313  Sum_probs=330.3

Q ss_pred             CCCCCCCCCccccccccchhccccCchHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHhhCCcccccCchh-hhh
Q 038621           32 RNLPLPPGTLGWPYIGETFELYSQNPNVFFASKVKRYGSIFKTHILGCPCVMISSPEAAKFVLVTRAHLFKPTFPA-SKE  110 (477)
Q Consensus        32 ~~~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~yG~i~~i~~~~~~~vvv~~~~~~~~il~~~~~~~~~~~~~-~~~  110 (477)
                      ++.+.||||+++|++|+++.+..+..+..+.+++++||++|++++|++++|+++||+.+++++.++...|..+... ...
T Consensus        27 ~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~~  106 (503)
T PLN02394         27 KKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFD  106 (503)
T ss_pred             CcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcchHh
Confidence            4467899999999999998874333578999999999999999999999999999999999998776666654322 223


Q ss_pred             hhhc--CCceeecCChhHHHhHHHHH-hcCCHHHHHhhHHHHHHHHHHHHHHhc------CCcccHHHHHHHHHHHHHHH
Q 038621          111 RMIG--KQAIFFHQGDYHIKLRKLVL-RAFMPEAIKNIIPDIECIAKDSLQSWQ------GRLINTYQEMKIYTFNVALL  181 (477)
Q Consensus       111 ~~~g--~~~~~~~~g~~w~~~R~~~~-~~~~~~~l~~~~~~~~~~~~~~l~~~~------~~~v~~~~~~~~~~~~~~~~  181 (477)
                      .+.|  ..++++.+|+.|+++|+.+. +.|+++.++.+.+.++++++++++.+.      ++.+++.+.++.+++|+++.
T Consensus       107 ~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi~~  186 (503)
T PLN02394        107 IFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIMYR  186 (503)
T ss_pred             HhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHHHH
Confidence            3333  24467778999999999996 889999999999999999999988872      34589999999999999999


Q ss_pred             HhcCCCchhhHH----HHHHHHHHHh---hcc-----cccCccCCCh-hh-HHHHHHHHHHHH-HHHHHHHHHHhc----
Q 038621          182 SIFGKDEVLYRE----DLKRCYYILE---KGY-----NSMPINLPGT-LF-HKSMKARKELAQ-IVAKIISTRRQM----  242 (477)
Q Consensus       182 ~~fG~~~~~~~~----~~~~~~~~~~---~~~-----~~~~~~~p~~-~~-~~~~~~~~~~~~-~~~~~i~~~~~~----  242 (477)
                      ++||.+.....+    .+........   ..+     ..+|...+.. .+ +........... +.+..++++++.    
T Consensus       187 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  266 (503)
T PLN02394        187 MMFDRRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICQDVKERRLALFKDYFVDERKKLMSAK  266 (503)
T ss_pred             HHhCCCcccccchhHHHHHHHHHHHHHHhcccccchhhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            999986542211    1111111111   100     1111111110 01 111111121122 223345544331    


Q ss_pred             ---ccCCCChHHhhhhcC--CCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcChhHHHHHHHHHHHHhhhcccCCc
Q 038621          243 ---KLDHNDLLGSFMGAK--EGLTDEQIADNIIGVIFAARDTTASALTWIVKYLGENPGVLQAVTEEQEAIIKSKEKSGE  317 (477)
Q Consensus       243 ---~~~~~d~l~~ll~~~--~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~  317 (477)
                         .....|+++.+++..  +.++++++..++.++++||+|||+++++|++++|++||++|+|+++|++++.+.+     
T Consensus       267 ~~~~~~~~d~l~~ll~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~-----  341 (503)
T PLN02394        267 GMDKEGLKCAIDHILEAQKKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGPG-----  341 (503)
T ss_pred             cCCcchhhhHHHHHHhccccCCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCC-----
Confidence               113368899999753  3588999999999999999999999999999999999999999999999998542     


Q ss_pred             cccCChhhcCCCchHHHHHHhhhcCCCCcccc-ceeeeccceeCCEEeCCCCEEeecccccccCCCCCCCCCCCCCCCCC
Q 038621          318 EEVLSWADTKKMPITSRVIQETLRVASILSFT-FREAVEDVEYEGYLIPKGWKVLPLFRNIHHSPEIFPDPEKFDPSRFE  396 (477)
Q Consensus       318 ~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeR~l  396 (477)
                       ..++++++++||||+|||+|+||++|++|+. .|.+.+|++++||.|||||.|.++.|++||||++|+||++|+||||+
T Consensus       342 -~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRwl  420 (503)
T PLN02394        342 -NQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERFL  420 (503)
T ss_pred             -CCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccccC
Confidence             4578999999999999999999999999976 48899999999999999999999999999999999999999999998


Q ss_pred             CCC-------CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCeEEEecCCCccc----cc-ccccCCCCccEEEEE
Q 038621          397 VSP-------KPNTFMPFGNGTHSCPGNELAKLEILVLLHHLTTKYRWTVVGTNTGIQ----YG-PFALPMNGLPIRLAQ  464 (477)
Q Consensus       397 ~~~-------~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~----~~-~~~~~~~~~~v~~~~  464 (477)
                      ++.       ....++|||.|+|.|+|+++|++|+++++|.|+++|++++.++.....    ++ .+...+.++.+++.+
T Consensus       421 ~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  500 (503)
T PLN02394        421 EEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQSKIDVSEKGGQFSLHIAKHSTVVFKP  500 (503)
T ss_pred             CCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcCccccccCceeeccCCCceEEeec
Confidence            631       245799999999999999999999999999999999999876542111    22 344344468999999


Q ss_pred             cc
Q 038621          465 KS  466 (477)
Q Consensus       465 r~  466 (477)
                      |.
T Consensus       501 r~  502 (503)
T PLN02394        501 RS  502 (503)
T ss_pred             CC
Confidence            85


No 19 
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=4.9e-71  Score=547.16  Aligned_cols=453  Identities=21%  Similarity=0.319  Sum_probs=356.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCccccccccchhccccCchHHHHHHHHhhCCeEEEeecCccEEEEcCH
Q 038621            8 LLPFASICFILCFYLFLKFISSNGRNLPLPPGTLGWPYIGETFELYSQNPNVFFASKVKRYGSIFKTHILGCPCVMISSP   87 (477)
Q Consensus         8 ll~~~~l~~~~~~~~~~~~~~~~~~~~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~yG~i~~i~~~~~~~vvv~~~   87 (477)
                      ++.++++++++.+++..++.....++.+.||||+++|++||++.+ ..+++.++.+++++||++|++++++.++|+++||
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~pl~G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dp   83 (514)
T PLN03112          5 LLSLLFSVLIFNVLIWRWLNASMRKSLRLPPGPPRWPIVGNLLQL-GPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDP   83 (514)
T ss_pred             HHHHHHHHHHHHHHHHHHccccccCCCCCccCCCCCCeeeeHHhc-CCchHHHHHHHHHHhCCeEEEEecCccEEEECCH
Confidence            333444444443444334444556667889999999999999887 4678999999999999999999999999999999


Q ss_pred             HHHHHHHhhCCcccccCchhh--hhhhhc-CCceeecCChhHHHhHHHH-HhcCCHHHHHhhHHHHHHHHHHHHHHh---
Q 038621           88 EAAKFVLVTRAHLFKPTFPAS--KERMIG-KQAIFFHQGDYHIKLRKLV-LRAFMPEAIKNIIPDIECIAKDSLQSW---  160 (477)
Q Consensus        88 ~~~~~il~~~~~~~~~~~~~~--~~~~~g-~~~~~~~~g~~w~~~R~~~-~~~~~~~~l~~~~~~~~~~~~~~l~~~---  160 (477)
                      +++++++.++...|+.+....  ....+| ..+++..+|+.|+++|+.+ .+.|+.++++.+.+.+.+.++.+++.+   
T Consensus        84 e~~~~vl~~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~  163 (514)
T PLN03112         84 ELIREILLRQDDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEA  163 (514)
T ss_pred             HHHHHHHHhCCcccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence            999999988777776643321  122334 2345667899999999995 468999999999999999999988765   


Q ss_pred             --cCCcccHHHHHHHHHHHHHHHHhcCCCch-------hhHHHHHHHHHHHhhcc------cccCcc--C-CChhhHHHH
Q 038621          161 --QGRLINTYQEMKIYTFNVALLSIFGKDEV-------LYREDLKRCYYILEKGY------NSMPIN--L-PGTLFHKSM  222 (477)
Q Consensus       161 --~~~~v~~~~~~~~~~~~~~~~~~fG~~~~-------~~~~~~~~~~~~~~~~~------~~~~~~--~-p~~~~~~~~  222 (477)
                        +++++|+.+.++.+++++++.++||.+..       .....+.+.+..+....      ..+|.+  + +....++..
T Consensus       164 ~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  243 (514)
T PLN03112        164 AQTGKPVNLREVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMR  243 (514)
T ss_pred             hccCCeeeHHHHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHH
Confidence              25679999999999999999999998631       11223444333332211      112221  1 211234455


Q ss_pred             HHHHHHHHHHHHHHHHHHhcc------cCCCChHHhhhhcC-----CCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHH
Q 038621          223 KARKELAQIVAKIISTRRQMK------LDHNDLLGSFMGAK-----EGLTDEQIADNIIGVIFAARDTTASALTWIVKYL  291 (477)
Q Consensus       223 ~~~~~~~~~~~~~i~~~~~~~------~~~~d~l~~ll~~~-----~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L  291 (477)
                      +..+.+.+++++.++++++..      .+..|+++.++++.     ..++++++.+++.++++||+|||+++++|++++|
T Consensus       244 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L  323 (514)
T PLN03112        244 EVEKRVDEFHDKIIDEHRRARSGKLPGGKDMDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEV  323 (514)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcccccCCccchHHHHHHHhhccccccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHH
Confidence            667778888888888766531      23458999998742     1378999999999999999999999999999999


Q ss_pred             hcChhHHHHHHHHHHHHhhhcccCCccccCChhhcCCCchHHHHHHhhhcCCCCccc-cceeeeccceeCCEEeCCCCEE
Q 038621          292 GENPGVLQAVTEEQEAIIKSKEKSGEEEVLSWADTKKMPITSRVIQETLRVASILSF-TFREAVEDVEYEGYLIPKGWKV  370 (477)
Q Consensus       292 ~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~i~g~~ip~G~~v  370 (477)
                      ++||++|+|+++|++++.+..      +.++.+++++|||++|||+|++|++|++|+ ..|.+.+|++++||.|||||.|
T Consensus       324 ~~~P~vq~kl~~Ei~~~~~~~------~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v  397 (514)
T PLN03112        324 IKNPRVLRKIQEELDSVVGRN------RMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRV  397 (514)
T ss_pred             HhChHHHHHHHHHHHHhcCCC------CcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEE
Confidence            999999999999999997542      458999999999999999999999999996 4699999999999999999999


Q ss_pred             eecccccccCCCCCCCCCCCCCCCCCCC---------CCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCeEEEec
Q 038621          371 LPLFRNIHHSPEIFPDPEKFDPSRFEVS---------PKPNTFMPFGNGTHSCPGNELAKLEILVLLHHLTTKYRWTVVG  441 (477)
Q Consensus       371 ~~~~~~~~~d~~~~~~p~~F~PeR~l~~---------~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~  441 (477)
                      .++.+++||||++|+||++|+||||+.+         .....++|||.|+|.|+|+++|++|++++++.|+++|++++.+
T Consensus       398 ~~~~~~~h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~  477 (514)
T PLN03112        398 FINTHGLGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPD  477 (514)
T ss_pred             EEehHHhhCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCC
Confidence            9999999999999999999999997642         1235799999999999999999999999999999999999875


Q ss_pred             CCC--ccc----ccccccCCCCccEEEEEccC
Q 038621          442 TNT--GIQ----YGPFALPMNGLPIRLAQKSK  467 (477)
Q Consensus       442 ~~~--~~~----~~~~~~~~~~~~v~~~~r~~  467 (477)
                      +..  .+.    ++....+.+++.+++.+|..
T Consensus       478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  509 (514)
T PLN03112        478 GLRPEDIDTQEVYGMTMPKAKPLRAVATPRLA  509 (514)
T ss_pred             CCCcccCCCccccCcccccCCCeEEEeecCCc
Confidence            431  222    23445566789999999963


No 20 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=4.9e-70  Score=537.52  Aligned_cols=414  Identities=24%  Similarity=0.383  Sum_probs=328.4

Q ss_pred             HhhcCCCCCCCCCCCccccccccchhccccCchHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHhhCCcccccCc
Q 038621           26 FISSNGRNLPLPPGTLGWPYIGETFELYSQNPNVFFASKVKRYGSIFKTHILGCPCVMISSPEAAKFVLVTRAHLFKPTF  105 (477)
Q Consensus        26 ~~~~~~~~~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~yG~i~~i~~~~~~~vvv~~~~~~~~il~~~~~~~~~~~  105 (477)
                      +.+...+..+.||||+++|++||++.+...+++.++.+++++||++|++++++.++|+++||+++++++.++...|..+.
T Consensus        20 ~~~~~~~~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~   99 (502)
T PLN02966         20 YQKPKTKRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRP   99 (502)
T ss_pred             HhccccCCCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCC
Confidence            33334444578999999999999998854578999999999999999999999999999999999999988776665443


Q ss_pred             hhhhhhh--hcCCce-eecCChhHHHhHHH-HHhcCCHHHHHhhHHHHHHHHHHHHHHhc-----CCcccHHHHHHHHHH
Q 038621          106 PASKERM--IGKQAI-FFHQGDYHIKLRKL-VLRAFMPEAIKNIIPDIECIAKDSLQSWQ-----GRLINTYQEMKIYTF  176 (477)
Q Consensus       106 ~~~~~~~--~g~~~~-~~~~g~~w~~~R~~-~~~~~~~~~l~~~~~~~~~~~~~~l~~~~-----~~~v~~~~~~~~~~~  176 (477)
                      .......  .|..++ +..+|+.|+++|+. +++.|+..+++.+.+.+.+.++++++.+.     ++.+|+.+++..+++
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~  179 (502)
T PLN02966        100 PHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTN  179 (502)
T ss_pred             CCccceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHH
Confidence            3221112  232223 44579999999999 78899999999999999999999998882     457999999999999


Q ss_pred             HHHHHHhcCCCchhhHH---HHHHHHHHHhhcc------cccCcc--CCC-hh-hHHHHHHHHHHHHHHHHHHHHHHhc-
Q 038621          177 NVALLSIFGKDEVLYRE---DLKRCYYILEKGY------NSMPIN--LPG-TL-FHKSMKARKELAQIVAKIISTRRQM-  242 (477)
Q Consensus       177 ~~~~~~~fG~~~~~~~~---~~~~~~~~~~~~~------~~~~~~--~p~-~~-~~~~~~~~~~~~~~~~~~i~~~~~~-  242 (477)
                      ++++.++||.+.+...+   .+.+.+.......      ..+|..  ++. .. .+....+.+...+++.+.++++.+. 
T Consensus       180 dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  259 (502)
T PLN02966        180 SVVCRQAFGKKYNEDGEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPK  259 (502)
T ss_pred             HHHHHHHhCCccCccchHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            99999999986432222   2333222211111      112211  110 00 1122234556667777777665432 


Q ss_pred             --ccCCCChHHhhhhcC------CCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcChhHHHHHHHHHHHHhhhccc
Q 038621          243 --KLDHNDLLGSFMGAK------EGLTDEQIADNIIGVIFAARDTTASALTWIVKYLGENPGVLQAVTEEQEAIIKSKEK  314 (477)
Q Consensus       243 --~~~~~d~l~~ll~~~------~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~  314 (477)
                        ..+..|+++.+++..      ..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++++... 
T Consensus       260 ~~~~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~-  338 (502)
T PLN02966        260 RVKPETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKG-  338 (502)
T ss_pred             ccccccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccC-
Confidence              123468888888532      24789999999999999999999999999999999999999999999999986421 


Q ss_pred             CCccccCChhhcCCCchHHHHHHhhhcCCCCcccc-ceeeeccceeCCEEeCCCCEEeecccccccCCCCC-CCCCCCCC
Q 038621          315 SGEEEVLSWADTKKMPITSRVIQETLRVASILSFT-FREAVEDVEYEGYLIPKGWKVLPLFRNIHHSPEIF-PDPEKFDP  392 (477)
Q Consensus       315 ~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P  392 (477)
                       +  ..++++++++|||++|||+|+||++|++|+. .|.+.+|++++||.|||||.|.++.|++||||++| +||++|+|
T Consensus       339 -~--~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~P  415 (502)
T PLN02966        339 -S--TFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRP  415 (502)
T ss_pred             -C--CcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCCh
Confidence             1  3579999999999999999999999999974 69999999999999999999999999999999999 99999999


Q ss_pred             CCCCCC-----CCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCeEEEecCC
Q 038621          393 SRFEVS-----PKPNTFMPFGNGTHSCPGNELAKLEILVLLHHLTTKYRWTVVGTN  443 (477)
Q Consensus       393 eR~l~~-----~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~  443 (477)
                      |||+++     ..+..++|||.|+|.|+|+++|++|+++++|.|+++|+|++.++.
T Consensus       416 eRwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~  471 (502)
T PLN02966        416 ERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGM  471 (502)
T ss_pred             hhhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCC
Confidence            999974     235689999999999999999999999999999999999987653


No 21 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=9.1e-70  Score=532.76  Aligned_cols=418  Identities=19%  Similarity=0.287  Sum_probs=327.1

Q ss_pred             CCCCCCccccccccchhccccCc--hHHHHHHHHhhCCeEE---EeecCccEEEEcCHHHHHHHHhhCCcccccCch-hh
Q 038621           35 PLPPGTLGWPYIGETFELYSQNP--NVFFASKVKRYGSIFK---THILGCPCVMISSPEAAKFVLVTRAHLFKPTFP-AS  108 (477)
Q Consensus        35 ~~ppgp~~~P~~G~~~~~~~~~~--~~~~~~~~~~yG~i~~---i~~~~~~~vvv~~~~~~~~il~~~~~~~~~~~~-~~  108 (477)
                      ++.|||.+||++||+..+.++..  .+++.+..++||..++   .++|+.++|+++||+.+++|+.++...|..... ..
T Consensus        31 ~~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~  110 (500)
T PLN02169         31 HGQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKK  110 (500)
T ss_pred             CCCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHH
Confidence            35788889999999987743322  2334444445887665   577899999999999999999887666655432 23


Q ss_pred             hhhhhcCCceeecCChhHHHhHHHHHhcCCHHHHHhh--HHHHHHHHHHHHHHh-----cCCcccHHHHHHHHHHHHHHH
Q 038621          109 KERMIGKQAIFFHQGDYHIKLRKLVLRAFMPEAIKNI--IPDIECIAKDSLQSW-----QGRLINTYQEMKIYTFNVALL  181 (477)
Q Consensus       109 ~~~~~g~~~~~~~~g~~w~~~R~~~~~~~~~~~l~~~--~~~~~~~~~~~l~~~-----~~~~v~~~~~~~~~~~~~~~~  181 (477)
                      ....+| .|+++++|+.|+++|+++++.|+...+..+  .+.+.+.++.+++.+     +++.+|+.+.+.++++|+++.
T Consensus       111 ~~~~~g-~gl~~~~g~~Wr~~Rk~l~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dvi~~  189 (500)
T PLN02169        111 IFDVLG-EGILTVDFELWEDLRKSNHALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDTSSI  189 (500)
T ss_pred             HHHhhc-CcccccCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHHHHh
Confidence            334456 899999999999999999999998877642  355656666665554     256799999999999999999


Q ss_pred             HhcCCCchhh-----HHHHHHHHHHHhhcc---cccCc-------cCCChhhHHHHHHHHHHHHHHHHHHHHHHhcc---
Q 038621          182 SIFGKDEVLY-----REDLKRCYYILEKGY---NSMPI-------NLPGTLFHKSMKARKELAQIVAKIISTRRQMK---  243 (477)
Q Consensus       182 ~~fG~~~~~~-----~~~~~~~~~~~~~~~---~~~~~-------~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---  243 (477)
                      ++||.+.+..     ...+.+.+.......   ...|+       +++....++..++.+.+.+++.+.|+++++..   
T Consensus       190 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~~~  269 (500)
T PLN02169        190 LMTGYDPMSLSIEMLEVEFGEAADIGEEAIYYRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSRRKEEISR  269 (500)
T ss_pred             heeCCCccccCCCCCCCHHHHHHHHHHHHHHhHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            9999864311     123333322221110   11121       12222345566788889999999998886531   


Q ss_pred             ----cCCCChHHhhhhcCC-------CCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcChhHHHHHHHHHHHHhhhc
Q 038621          244 ----LDHNDLLGSFMGAKE-------GLTDEQIADNIIGVIFAARDTTASALTWIVKYLGENPGVLQAVTEEQEAIIKSK  312 (477)
Q Consensus       244 ----~~~~d~l~~ll~~~~-------~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~  312 (477)
                          ...+|+++.+++..+       .++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++    
T Consensus       270 ~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v----  345 (500)
T PLN02169        270 AETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTK----  345 (500)
T ss_pred             ccccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhh----
Confidence                123689998887531       26788999999999999999999999999999999999999999999875    


Q ss_pred             ccCCccccCChhhcCCCchHHHHHHhhhcCCCCccccceeeecccee-CCEEeCCCCEEeecccccccCCCCC-CCCCCC
Q 038621          313 EKSGEEEVLSWADTKKMPITSRVIQETLRVASILSFTFREAVEDVEY-EGYLIPKGWKVLPLFRNIHHSPEIF-PDPEKF  390 (477)
Q Consensus       313 ~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~i-~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F  390 (477)
                              ++.+++++||||+||++||||+||++|...|.+.+|.++ +|+.||||+.|.++.|++||||++| +||++|
T Consensus       346 --------~~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~F  417 (500)
T PLN02169        346 --------FDNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDALDF  417 (500)
T ss_pred             --------CCHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCChhhc
Confidence                    457899999999999999999999999888888777665 8999999999999999999999999 899999


Q ss_pred             CCCCCCCC------CCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCeEEEecCCC-cccccccccCCCCccEEEE
Q 038621          391 DPSRFEVS------PKPNTFMPFGNGTHSCPGNELAKLEILVLLHHLTTKYRWTVVGTNT-GIQYGPFALPMNGLPIRLA  463 (477)
Q Consensus       391 ~PeR~l~~------~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~v~~~  463 (477)
                      +||||+++      ..+..++|||+|+|.|+|+++|++|+++++|.|+++|++++.++.. ....+.+.+|++|++|+++
T Consensus       418 ~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~~~~~~~~~~l~~~~gl~l~l~  497 (500)
T PLN02169        418 KPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGHKIEAIPSILLRMKHGLKVTVT  497 (500)
T ss_pred             CccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCCCcccccceEEecCCCEEEEEE
Confidence            99999964      1256899999999999999999999999999999999999975532 2233567789999999999


Q ss_pred             Ec
Q 038621          464 QK  465 (477)
Q Consensus       464 ~r  465 (477)
                      +|
T Consensus       498 ~~  499 (500)
T PLN02169        498 KK  499 (500)
T ss_pred             eC
Confidence            87


No 22 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=2.3e-69  Score=531.77  Aligned_cols=459  Identities=20%  Similarity=0.334  Sum_probs=344.4

Q ss_pred             CCchhhhHHHHHHHHHHHHHHHHHHHhhc----CCCCCCCCCCCccccccccchhccccCch-HHHHHHHHhh-CCeEEE
Q 038621            1 MDFTFLFLLPFASICFILCFYLFLKFISS----NGRNLPLPPGTLGWPYIGETFELYSQNPN-VFFASKVKRY-GSIFKT   74 (477)
Q Consensus         1 m~~~~~~ll~~~~l~~~~~~~~~~~~~~~----~~~~~~~ppgp~~~P~~G~~~~~~~~~~~-~~~~~~~~~y-G~i~~i   74 (477)
                      |.+++.|-+.++.++.+....++-....+    +....+.||||+++|++||++.+..+++. .++.++.++| |+||++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~   81 (534)
T PLN03018          2 MSFNTSFQILLGFIVFIASITLLGRILSRPSKTKDRSRQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACF   81 (534)
T ss_pred             CCcCchHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEE
Confidence            55677777777777666655543333222    22333468999999999999987533443 4566666666 799999


Q ss_pred             eecCccEEEEcCHHHHHHHHhhCCcccccCchhhhhhhhcC--Cceeec-CChhHHHhHHHHHhcCCHHHHHh-hHHHHH
Q 038621           75 HILGCPCVMISSPEAAKFVLVTRAHLFKPTFPASKERMIGK--QAIFFH-QGDYHIKLRKLVLRAFMPEAIKN-IIPDIE  150 (477)
Q Consensus        75 ~~~~~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~~~~g~--~~~~~~-~g~~w~~~R~~~~~~~~~~~l~~-~~~~~~  150 (477)
                      ++|+.++|+|+||++++++++++...|++++.......++.  .++++. +|+.|+++|+++++.|......+ +.+..+
T Consensus        82 ~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~  161 (534)
T PLN03018         82 NFAGTHTITINSDEIAREAFRERDADLADRPQLSIMETIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAART  161 (534)
T ss_pred             EeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhhhhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence            99999999999999999999988777877654333233442  246665 59999999999999875544444 445555


Q ss_pred             HHHHHHHHHh-----cCCcccHHHHHHHHHHHHHHHHhcCCCchh----------hHHHHHHHHHHHhhccccc------
Q 038621          151 CIAKDSLQSW-----QGRLINTYQEMKIYTFNVALLSIFGKDEVL----------YREDLKRCYYILEKGYNSM------  209 (477)
Q Consensus       151 ~~~~~~l~~~-----~~~~v~~~~~~~~~~~~~~~~~~fG~~~~~----------~~~~~~~~~~~~~~~~~~~------  209 (477)
                      ++++++++.+     .++++|+.+.+.+++++++++++||.+...          ....+......+......+      
T Consensus       162 ~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (534)
T PLN03018        162 IEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTMRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPV  241 (534)
T ss_pred             HHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHHHHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHH
Confidence            5667776665     245799999999999999999999986321          0111211122111111111      


Q ss_pred             ---CccCCC----hhhHHHHHHHHHHHHHHHHHHHHHHhc----cc--CCCChHHhhhhcC---C--CCCHHHHHHHHHH
Q 038621          210 ---PINLPG----TLFHKSMKARKELAQIVAKIISTRRQM----KL--DHNDLLGSFMGAK---E--GLTDEQIADNIIG  271 (477)
Q Consensus       210 ---~~~~p~----~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~--~~~d~l~~ll~~~---~--~~~~~~i~~~~~~  271 (477)
                         +.++..    ....+.....+.+.+++++.++++++.    .+  ...|+++.+++..   .  .++++++.+++.+
T Consensus       242 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~  321 (534)
T PLN03018        242 DYVERWLRGWNIDGQEERAKVNVNLVRSYNNPIIDERVELWREKGGKAAVEDWLDTFITLKDQNGKYLVTPDEIKAQCVE  321 (534)
T ss_pred             HHhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcccHHHHHHHhhcccCCCCCCHHHHHHHHHH
Confidence               111110    011223334566778888888877542    11  2368999998643   1  2899999999999


Q ss_pred             HHhhcccchHHHHHHHHHHHhcChhHHHHHHHHHHHHhhhcccCCccccCChhhcCCCchHHHHHHhhhcCCCCcccc-c
Q 038621          272 VIFAARDTTASALTWIVKYLGENPGVLQAVTEEQEAIIKSKEKSGEEEVLSWADTKKMPITSRVIQETLRVASILSFT-F  350 (477)
Q Consensus       272 ~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~-~  350 (477)
                      +++||+|||+.+++|++++|+.||++|+|+++|++++++..      ..++.+++.+|||++|||+|+||++|++|.. .
T Consensus       322 ~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~------~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~  395 (534)
T PLN03018        322 FCIAAIDNPANNMEWTLGEMLKNPEILRKALKELDEVVGKD------RLVQESDIPNLNYLKACCRETFRIHPSAHYVPP  395 (534)
T ss_pred             HHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCC------CCCCHHHhcCCHHHHHHHHHHHhcCCCccccCC
Confidence            99999999999999999999999999999999999998542      4588999999999999999999999999976 4


Q ss_pred             eeeeccceeCCEEeCCCCEEeecccccccCCCCCCCCCCCCCCCCCCCC----------CCCCccccCCCCCCCccHHHH
Q 038621          351 REAVEDVEYEGYLIPKGWKVLPLFRNIHHSPEIFPDPEKFDPSRFEVSP----------KPNTFMPFGNGTHSCPGNELA  420 (477)
Q Consensus       351 r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~~----------~~~~~~~Fg~G~r~C~G~~lA  420 (477)
                      |.+.+|++++||.||||+.|+++.|++||||++|+||++|+||||++..          .+..++|||.|+|.|+|+++|
T Consensus       396 r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA  475 (534)
T PLN03018        396 HVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVG  475 (534)
T ss_pred             cccCCCeeECCEEECCCCEEEEChHHhcCCcccCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHH
Confidence            9999999999999999999999999999999999999999999999631          245799999999999999999


Q ss_pred             HHHHHHHHHHHHhcCeEEEecCCCccc---ccccccCCCCccEEEEEc
Q 038621          421 KLEILVLLHHLTTKYRWTVVGTNTGIQ---YGPFALPMNGLPIRLAQK  465 (477)
Q Consensus       421 ~~~~~~~l~~ll~~f~~~~~~~~~~~~---~~~~~~~~~~~~v~~~~r  465 (477)
                      .+|+++++|+|+++|++++.++.....   ...+...+.++.|++++|
T Consensus       476 ~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~~R  523 (534)
T PLN03018        476 TIMMVMMLARFLQGFNWKLHQDFGPLSLEEDDASLLMAKPLLLSVEPR  523 (534)
T ss_pred             HHHHHHHHHHHHHhceEEeCCCCCCCCccccccceecCCCeEEEEEec
Confidence            999999999999999999876531221   112333456899999999


No 23 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=9e-70  Score=530.69  Aligned_cols=423  Identities=20%  Similarity=0.285  Sum_probs=336.4

Q ss_pred             CCCCccccccccchhccccCchHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHhhCCcccccCch-hhhhhhhcC
Q 038621           37 PPGTLGWPYIGETFELYSQNPNVFFASKVKRYGSIFKTHILGCPCVMISSPEAAKFVLVTRAHLFKPTFP-ASKERMIGK  115 (477)
Q Consensus        37 ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~yG~i~~i~~~~~~~vvv~~~~~~~~il~~~~~~~~~~~~-~~~~~~~g~  115 (477)
                      ||||+++|++||++++..++++.++.+++++||++|++++++.++|+|+||+++++++.++...|..+.. .....+.|.
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~   80 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD   80 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence            7899999999999998645689999999999999999999999999999999999999988777766543 223334442


Q ss_pred             -Cceeec-CChhHHHhHHHHH-hcCCHHHHHhhHHHHHHHHHHHHHHh-------cCCcccHHHHHHHHHHHHHHHHhcC
Q 038621          116 -QAIFFH-QGDYHIKLRKLVL-RAFMPEAIKNIIPDIECIAKDSLQSW-------QGRLINTYQEMKIYTFNVALLSIFG  185 (477)
Q Consensus       116 -~~~~~~-~g~~w~~~R~~~~-~~~~~~~l~~~~~~~~~~~~~~l~~~-------~~~~v~~~~~~~~~~~~~~~~~~fG  185 (477)
                       .++++. +|+.|+++|+.+. +.++...++.+.+.+.+.++.+++.+       .++++|+.+.++.+++++++.++||
T Consensus        81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG  160 (466)
T PLN02655         81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALG  160 (466)
T ss_pred             CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhc
Confidence             335554 4899999998665 46777777777777777666655554       2567999999999999999999999


Q ss_pred             CCchhhH-----------HHHHHHHHHHhhcc------cccCc--cCCChhhHHH-HHHHHHHHHHHHHHHHHHHhc---
Q 038621          186 KDEVLYR-----------EDLKRCYYILEKGY------NSMPI--NLPGTLFHKS-MKARKELAQIVAKIISTRRQM---  242 (477)
Q Consensus       186 ~~~~~~~-----------~~~~~~~~~~~~~~------~~~~~--~~p~~~~~~~-~~~~~~~~~~~~~~i~~~~~~---  242 (477)
                      .+.+...           ..+...+..+....      ..+|.  +++...+.+. .+......+++++.++++++.   
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  240 (466)
T PLN02655        161 EDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKRIAR  240 (466)
T ss_pred             cccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            8633211           11222222222211      12221  2232222222 222344457777777766543   


Q ss_pred             ccCCCChHHhhhhcCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcChhHHHHHHHHHHHHhhhcccCCccccCC
Q 038621          243 KLDHNDLLGSFMGAKEGLTDEQIADNIIGVIFAARDTTASALTWIVKYLGENPGVLQAVTEEQEAIIKSKEKSGEEEVLS  322 (477)
Q Consensus       243 ~~~~~d~l~~ll~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~  322 (477)
                      ..+..|+++.+++....++++++.+++.++++||+|||+++++|++++|+.||++|+|+++|++++.+.       ..++
T Consensus       241 ~~~~~d~l~~ll~~~~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~-------~~~~  313 (466)
T PLN02655        241 GEERDCYLDFLLSEATHLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGD-------ERVT  313 (466)
T ss_pred             CCCcccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCC-------CCCC
Confidence            223468999999876679999999999999999999999999999999999999999999999999754       3389


Q ss_pred             hhhcCCCchHHHHHHhhhcCCCCcccc-ceeeeccceeCCEEeCCCCEEeecccccccCCCCCCCCCCCCCCCCCCCC--
Q 038621          323 WADTKKMPITSRVIQETLRVASILSFT-FREAVEDVEYEGYLIPKGWKVLPLFRNIHHSPEIFPDPEKFDPSRFEVSP--  399 (477)
Q Consensus       323 ~~~l~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~~--  399 (477)
                      +++++++||++||++|+||++|+++.. +|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||+++.  
T Consensus       314 ~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~~~~  393 (466)
T PLN02655        314 EEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEKYE  393 (466)
T ss_pred             HHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCCCCcc
Confidence            999999999999999999999999976 59999999999999999999999999999999999999999999999752  


Q ss_pred             --CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCeEEEecCCCc--ccccccccCCCCccEEEEEcc
Q 038621          400 --KPNTFMPFGNGTHSCPGNELAKLEILVLLHHLTTKYRWTVVGTNTG--IQYGPFALPMNGLPIRLAQKS  466 (477)
Q Consensus       400 --~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~r~  466 (477)
                        ....++|||+|+|.|||+++|..+++++++.|+++|++++.++...  ...+.+..+++++.|++++|.
T Consensus       394 ~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  464 (466)
T PLN02655        394 SADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDEEKEDTVQLTTQKLHPLHAHLKPRG  464 (466)
T ss_pred             cCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCccccchhheeEeecCCcEEEEeecC
Confidence              3468999999999999999999999999999999999999765422  223556778899999998874


No 24 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2e-69  Score=482.95  Aligned_cols=426  Identities=28%  Similarity=0.492  Sum_probs=358.8

Q ss_pred             CCCCCCccc-cccccchhccccCchHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHhhCCc--ccccCchhhhhh
Q 038621           35 PLPPGTLGW-PYIGETFELYSQNPNVFFASKVKRYGSIFKTHILGCPCVMISSPEAAKFVLVTRAH--LFKPTFPASKER  111 (477)
Q Consensus        35 ~~ppgp~~~-P~~G~~~~~~~~~~~~~~~~~~~~yG~i~~i~~~~~~~vvv~~~~~~~~il~~~~~--~~~~~~~~~~~~  111 (477)
                      +.||.-.+| ||+|++.+| +++|..++++.++|||+||++.++|+.+.++.||+....+++....  ++.........+
T Consensus        31 ~~PPli~gwiP~lG~a~~f-gk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~  109 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAF-GKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTP  109 (486)
T ss_pred             CCCcccccCcchhhHHHHh-ccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhh
Confidence            678876665 999999999 7999999999999999999999999999999999999999988733  344444456678


Q ss_pred             hhcCCceeecCChhHHHhHHHHHhcCCHHHHHhhHHHHHHHHHHHHHH-h-c-CCcccHHHHHHHHHHHHHHHHhcCCCc
Q 038621          112 MIGKQAIFFHQGDYHIKLRKLVLRAFMPEAIKNIIPDIECIAKDSLQS-W-Q-GRLINTYQEMKIYTFNVALLSIFGKDE  188 (477)
Q Consensus       112 ~~g~~~~~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~~~~~~~~l~~-~-~-~~~v~~~~~~~~~~~~~~~~~~fG~~~  188 (477)
                      +||+......++....++.+++..++...+++++.+.|.+++++.++. + + +.+-.+.+..+...+.+...+++|...
T Consensus       110 vFg~~v~~d~~~~~~~e~~~~~k~~L~~~~lk~~~e~m~~el~~~f~~~~~~s~~~d~l~~~~~~ii~tAs~~ll~~e~r  189 (486)
T KOG0684|consen  110 VFGKGVVYDVPNHVMMEQKKFFKSALGGVALKSLVELMLEELHAYFETSLGESGETDGLYTFCRLIIFTASRLLLGGEVR  189 (486)
T ss_pred             hcCCCccccCCCchHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhcccccccchhHhhhhhHHHhhhhHHHhhhhhhh
Confidence            888444445578889999999999999999999999999999999887 5 3 444556677777777777777777654


Q ss_pred             hhhHHHHHHHHHHHhhccc----ccCccCCChhhHHHHHHHHHHHHHHHHHHHHHHhccc-CCCChHHhhhh--c-CCCC
Q 038621          189 VLYREDLKRCYYILEKGYN----SMPINLPGTLFHKSMKARKELAQIVAKIISTRRQMKL-DHNDLLGSFMG--A-KEGL  260 (477)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~d~l~~ll~--~-~~~~  260 (477)
                      ...+++....+.++.+++.    .+|.++|....++..++++++.+.+...+.++++..+ ...|+++.+++  . ....
T Consensus       190 ~~~d~~~a~l~~dLd~~F~~~d~~FP~~LP~~~~r~~~ra~~~i~k~f~~~i~~rr~s~s~~~~dmlq~l~~~y~dg~~~  269 (486)
T KOG0684|consen  190 DQLDADVAKLYHDLDQGFQPFDFLFPYNLPIPLLRRRDRARKKISKIFSKIILDRRASISKWDNDMLQSLMEKYKDGRPT  269 (486)
T ss_pred             hhhcchHHHHHHHHhccccchHhhcccCCCcchhhhHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHhhcCCcC
Confidence            4333343444444444332    2455777777888889999999999999999998754 44688888887  2 2368


Q ss_pred             CHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcChhHHHHHHHHHHHHhhhcccCCccccCChhhcCCCchHHHHHHhhh
Q 038621          261 TDEQIADNIIGVIFAARDTTASALTWIVKYLGENPGVLQAVTEEQEAIIKSKEKSGEEEVLSWADTKKMPITSRVIQETL  340 (477)
Q Consensus       261 ~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~l  340 (477)
                      +++|+....+.+++||+.|++.+..|++++|++|||+++.+++|++.+++.+.     ..++.+++++||.|++||+|||
T Consensus       270 te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~-----~~l~~d~L~~lplL~~~IkEtL  344 (486)
T KOG0684|consen  270 TEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKK-----EKLTYDQLKDLPLLDSCIKETL  344 (486)
T ss_pred             cHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccC-----CCCCHHHHhcchHHHHHHHHHH
Confidence            89999999999999999999999999999999999999999999999997653     4489999999999999999999


Q ss_pred             cCCCCccccceeeeccceeCC----EEeCCCCEEeecccccccCCCCCCCCCCCCCCCCCCCC---------CCCCcccc
Q 038621          341 RVASILSFTFREAVEDVEYEG----YLIPKGWKVLPLFRNIHHSPEIFPDPEKFDPSRFEVSP---------KPNTFMPF  407 (477)
Q Consensus       341 Rl~p~~~~~~r~~~~d~~i~g----~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~~---------~~~~~~~F  407 (477)
                      ||+||.+.+.|.+.+|+++.+    |.||+|..|..+.+.+|+||++|+||++|+|+||+++.         -...++||
T Consensus       345 RL~~p~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpf  424 (486)
T KOG0684|consen  345 RLHPPAHSLMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNGESKKNGEKLDYYYMPF  424 (486)
T ss_pred             hcCCchhhHHHhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCCccccccccccccccccc
Confidence            999998988899999999976    99999999999999999999999999999999999641         12356999


Q ss_pred             CCCCCCCccHHHHHHHHHHHHHHHHhcCeEEEecCCC-cccc-cccccCCCCccEEEEEcc
Q 038621          408 GNGTHSCPGNELAKLEILVLLHHLTTKYRWTVVGTNT-GIQY-GPFALPMNGLPIRLAQKS  466 (477)
Q Consensus       408 g~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~-~~~~-~~~~~~~~~~~v~~~~r~  466 (477)
                      |+|+|.|||+++|.+|+++++..+|+.||+++.+++. ++++ ..+..|..++.+++++|+
T Consensus       425 GaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~P~~d~s~~v~~P~g~v~irYK~R~  485 (486)
T KOG0684|consen  425 GAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGPFPEVDYSRMVMQPEGDVRIRYKRRP  485 (486)
T ss_pred             CCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCCCCCCCHHHhhcCCCCCceEEEeecC
Confidence            9999999999999999999999999999999998642 3444 347889899999999986


No 25 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=2.6e-69  Score=534.71  Aligned_cols=428  Identities=20%  Similarity=0.263  Sum_probs=331.0

Q ss_pred             CCCCCccccccccchhccccCchHHHHHHHHhh---CCeEEEeecCccEEEEcCHHHHHHHHhhCCcccccCch--hhhh
Q 038621           36 LPPGTLGWPYIGETFELYSQNPNVFFASKVKRY---GSIFKTHILGCPCVMISSPEAAKFVLVTRAHLFKPTFP--ASKE  110 (477)
Q Consensus        36 ~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~y---G~i~~i~~~~~~~vvv~~~~~~~~il~~~~~~~~~~~~--~~~~  110 (477)
                      .+|||+++|++||++.+. .+ +..+.++.++|   |++|.+++++.+.|+++||+.+++++.++...+.....  ....
T Consensus        31 ~~pgp~~~p~~G~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~  108 (516)
T PLN03195         31 NRKGPKSWPIIGAALEQL-KN-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYME  108 (516)
T ss_pred             ccCCCCCCCeecchHHHH-hc-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHH
Confidence            368999999999998764 33 34456677777   89999999999999999999999999876444543321  1222


Q ss_pred             hhhcCCceeecCChhHHHhHHHHHhcCCHHHHHhhHHHH-HHHHHHHHHHh-----cCCcccHHHHHHHHHHHHHHHHhc
Q 038621          111 RMIGKQAIFFHQGDYHIKLRKLVLRAFMPEAIKNIIPDI-ECIAKDSLQSW-----QGRLINTYQEMKIYTFNVALLSIF  184 (477)
Q Consensus       111 ~~~g~~~~~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~-~~~~~~~l~~~-----~~~~v~~~~~~~~~~~~~~~~~~f  184 (477)
                      ...| .++++.+|+.|+++|+++++.|+.++++.+.+.+ .+.++.+.+.+     .++.+|+.++++.+++++++.++|
T Consensus       109 ~~~g-~~l~~~~g~~w~~~Rr~l~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~f  187 (516)
T PLN03195        109 VLLG-DGIFNVDGELWRKQRKTASFEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKVGF  187 (516)
T ss_pred             HHhc-CeeeccCcHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHHHh
Confidence            3345 6788889999999999999999999999998876 55555554443     256799999999999999999999


Q ss_pred             CCCchhh-----HHHHHHHHHHHhhcc--cc-cCcc-----CCChhhHHHHHHHHHHHHHHHHHHHHHHhcc--------
Q 038621          185 GKDEVLY-----REDLKRCYYILEKGY--NS-MPIN-----LPGTLFHKSMKARKELAQIVAKIISTRRQMK--------  243 (477)
Q Consensus       185 G~~~~~~-----~~~~~~~~~~~~~~~--~~-~~~~-----~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--------  243 (477)
                      |.+.+..     ...+.+.+.......  .. .|.+     ++....++..+..+.+.+++.+.++++++..        
T Consensus       188 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  267 (516)
T PLN03195        188 GVEIGTLSPSLPENPFAQAFDTANIIVTLRFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEARKSGK  267 (516)
T ss_pred             CCCccccccCCCccHHHHHHHHHHHHHHHHHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence            9864321     122333332221110  00 1111     1111123334566778888888888775431        


Q ss_pred             cCCCChHHhhhhcC----CCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcChhHHHHHHHHHHHHhhhcc----c-
Q 038621          244 LDHNDLLGSFMGAK----EGLTDEQIADNIIGVIFAARDTTASALTWIVKYLGENPGVLQAVTEEQEAIIKSKE----K-  314 (477)
Q Consensus       244 ~~~~d~l~~ll~~~----~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~----~-  314 (477)
                      ....|+++.+++..    ..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++.....    . 
T Consensus       268 ~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~  347 (516)
T PLN03195        268 KVKHDILSRFIELGEDPDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEEDPE  347 (516)
T ss_pred             cccccHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccccccccc
Confidence            12468999998643    24899999999999999999999999999999999999999999999999874320    0 


Q ss_pred             ---------CCccccCChhhcCCCchHHHHHHhhhcCCCCccccceeeecccee-CCEEeCCCCEEeecccccccCCCCC
Q 038621          315 ---------SGEEEVLSWADTKKMPITSRVIQETLRVASILSFTFREAVEDVEY-EGYLIPKGWKVLPLFRNIHHSPEIF  384 (477)
Q Consensus       315 ---------~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~i-~g~~ip~G~~v~~~~~~~~~d~~~~  384 (477)
                               .+....++++++++||||+|||+|+||++|++|...|.+.+|.++ +|+.|||||.|.++.|++||||++|
T Consensus       348 ~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~dp~~~  427 (516)
T PLN03195        348 DSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNW  427 (516)
T ss_pred             ccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchhhhhccCcCcCCCcEECCCCEEEEehHhhccChhhh
Confidence                     000145899999999999999999999999999888878887666 8999999999999999999999999


Q ss_pred             -CCCCCCCCCCCCCC-----CCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCeEEEecCCC-cccccccccCCCC
Q 038621          385 -PDPEKFDPSRFEVS-----PKPNTFMPFGNGTHSCPGNELAKLEILVLLHHLTTKYRWTVVGTNT-GIQYGPFALPMNG  457 (477)
Q Consensus       385 -~~p~~F~PeR~l~~-----~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~  457 (477)
                       +||++|+||||++.     ..+..++|||+|+|.|+|+++|++|+++++|.|+++|++++.++.. ......+..|.++
T Consensus       428 g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  507 (516)
T PLN03195        428 GPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGHPVKYRMMTILSMANG  507 (516)
T ss_pred             ccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCCcceeeeeeEEecCCC
Confidence             99999999999963     2345799999999999999999999999999999999999875432 2223456778899


Q ss_pred             ccEEEEEcc
Q 038621          458 LPIRLAQKS  466 (477)
Q Consensus       458 ~~v~~~~r~  466 (477)
                      +.|++++|.
T Consensus       508 ~~v~~~~r~  516 (516)
T PLN03195        508 LKVTVSRRS  516 (516)
T ss_pred             EEEEEEeCC
Confidence            999999873


No 26 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=4.5e-69  Score=535.08  Aligned_cols=415  Identities=20%  Similarity=0.357  Sum_probs=331.3

Q ss_pred             cccchhccccCchHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHhhCCcccccCchhh-hhhhhcCCceeecCCh
Q 038621           46 IGETFELYSQNPNVFFASKVKRYGSIFKTHILGCPCVMISSPEAAKFVLVTRAHLFKPTFPAS-KERMIGKQAIFFHQGD  124 (477)
Q Consensus        46 ~G~~~~~~~~~~~~~~~~~~~~yG~i~~i~~~~~~~vvv~~~~~~~~il~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~  124 (477)
                      +||+..+..+..+..+.+++++|||||++++|+.++++|+||+.+++++.++...|....... .....| .++++.+|+
T Consensus       142 ~G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~~g-~~l~~~dge  220 (633)
T PLN02738        142 KGSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVMG-KGLIPADGE  220 (633)
T ss_pred             cCcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhccC-CceecCCcH
Confidence            455555544456688999999999999999988999999999999999997766565543322 222334 678888999


Q ss_pred             hHHHhHHHHHhcCCHHHHHhhHHHHHHHHHHHHHHh-----cCCcccHHHHHHHHHHHHHHHHhcCCCchhh--HHHHHH
Q 038621          125 YHIKLRKLVLRAFMPEAIKNIIPDIECIAKDSLQSW-----QGRLINTYQEMKIYTFNVALLSIFGKDEVLY--REDLKR  197 (477)
Q Consensus       125 ~w~~~R~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~-----~~~~v~~~~~~~~~~~~~~~~~~fG~~~~~~--~~~~~~  197 (477)
                      .|+++|+.+++.|+...+.++++.+.+.++++++.+     .++.+|+.+.++.+++|+++.++||.+.+..  .+.+.+
T Consensus       221 ~wr~rRr~l~p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~~~~~  300 (633)
T PLN02738        221 IWRVRRRAIVPALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGIVE  300 (633)
T ss_pred             HHHHHHHhccHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccccchHHHH
Confidence            999999999999999999999999999999998887     2568999999999999999999999865421  112222


Q ss_pred             H----HHHHhh-cccccCcc-CCC-----hhhHHHHHHHHHHHHHHHHHHHHHHhc-------------ccCCCChHHhh
Q 038621          198 C----YYILEK-GYNSMPIN-LPG-----TLFHKSMKARKELAQIVAKIISTRRQM-------------KLDHNDLLGSF  253 (477)
Q Consensus       198 ~----~~~~~~-~~~~~~~~-~p~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~-------------~~~~~d~l~~l  253 (477)
                      .    +..... ....++.+ +|.     ...++..+..+.+...++++++.+++.             .....|+++.+
T Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~dil~~L  380 (633)
T PLN02738        301 AVYTVLREAEDRSVSPIPVWEIPIWKDISPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSILHFL  380 (633)
T ss_pred             HHHHHHHHHHHHhhcchhhhhhhHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccchHHHHH
Confidence            2    221111 11111211 111     112333344555555555555543221             11235799999


Q ss_pred             hhcCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcChhHHHHHHHHHHHHhhhcccCCccccCChhhcCCCchHH
Q 038621          254 MGAKEGLTDEQIADNIIGVIFAARDTTASALTWIVKYLGENPGVLQAVTEEQEAIIKSKEKSGEEEVLSWADTKKMPITS  333 (477)
Q Consensus       254 l~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~lp~l~  333 (477)
                      ++..+.++++++.+++..+++||+|||+.+++|++++|++||++|+|+|+|++++++.       ..++++++++||||+
T Consensus       381 l~~~~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~-------~~~t~edL~kLPYL~  453 (633)
T PLN02738        381 LASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD-------RFPTIEDMKKLKYTT  453 (633)
T ss_pred             HHcCCCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC-------CCCCHHHHccCHHHH
Confidence            9876678999999999999999999999999999999999999999999999999753       457999999999999


Q ss_pred             HHHHhhhcCCCCccccceeeeccceeCCEEeCCCCEEeecccccccCCCCCCCCCCCCCCCCCCC-------CCCCCccc
Q 038621          334 RVIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSPEIFPDPEKFDPSRFEVS-------PKPNTFMP  406 (477)
Q Consensus       334 a~i~E~lRl~p~~~~~~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~-------~~~~~~~~  406 (477)
                      |||+|+||++|++|.++|++.+|++++||.|||||.|.++.|.+||||++|+||++|+||||+..       .....++|
T Consensus       454 AVIkEtLRL~p~~p~~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vp  533 (633)
T PLN02738        454 RVINESLRLYPQPPVLIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLP  533 (633)
T ss_pred             HHHHHHHhcCCCccccceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCCCceeC
Confidence            99999999999999888999999999999999999999999999999999999999999999842       13457999


Q ss_pred             cCCCCCCCccHHHHHHHHHHHHHHHHhcCeEEEecCCCccc--ccccccCCCCccEEEEEccCC
Q 038621          407 FGNGTHSCPGNELAKLEILVLLHHLTTKYRWTVVGTNTGIQ--YGPFALPMNGLPIRLAQKSKD  468 (477)
Q Consensus       407 Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~r~~~  468 (477)
                      ||.|+|.|+|++||++|+++++|.|+++|++++.++..+..  .+.+..|+++++|++++|..+
T Consensus       534 FG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~~~~~~~~~~~~p~~~l~v~l~~R~~~  597 (633)
T PLN02738        534 FGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAPPVKMTTGATIHTTEGLKMTVTRRTKP  597 (633)
T ss_pred             CCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCCCcccccceEEeeCCCcEEEEEECCCC
Confidence            99999999999999999999999999999999976643222  345777889999999999753


No 27 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=6.2e-70  Score=536.74  Aligned_cols=419  Identities=32%  Similarity=0.545  Sum_probs=347.5

Q ss_pred             CCCCccccccccchhccc-cCchHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHhhCCcccccCch-hhhh---h
Q 038621           37 PPGTLGWPYIGETFELYS-QNPNVFFASKVKRYGSIFKTHILGCPCVMISSPEAAKFVLVTRAHLFKPTFP-ASKE---R  111 (477)
Q Consensus        37 ppgp~~~P~~G~~~~~~~-~~~~~~~~~~~~~yG~i~~i~~~~~~~vvv~~~~~~~~il~~~~~~~~~~~~-~~~~---~  111 (477)
                      ||||+++|++||+..+.. ++++.++.+++++||+||++++++.++++|+||+++++++.++...++.+.. ....   .
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            899999999999999852 6788999999999999999999999999999999999999998776766432 1222   1


Q ss_pred             hhcCCceeecCChhHHHhHHHHHhcCCHH-HHHhhHHHHHHHHHHHHHHhc-----CCcccHHHHHHHHHHHHHHHHhcC
Q 038621          112 MIGKQAIFFHQGDYHIKLRKLVLRAFMPE-AIKNIIPDIECIAKDSLQSWQ-----GRLINTYQEMKIYTFNVALLSIFG  185 (477)
Q Consensus       112 ~~g~~~~~~~~g~~w~~~R~~~~~~~~~~-~l~~~~~~~~~~~~~~l~~~~-----~~~v~~~~~~~~~~~~~~~~~~fG  185 (477)
                      ..++.++++.+|+.|+.+|+.+.+.|+.. .+ ++.+.+.+.++++++.+.     ++.+|+.++++.+++++++.++||
T Consensus        81 ~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~fG  159 (463)
T PF00067_consen   81 PFGGKGLFFSDGERWRRQRRLLAPAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVLFG  159 (463)
T ss_dssp             HHTTTSSTTSSHHHHHHHHHHHHHHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHHHS
T ss_pred             cccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccceeeeeccccccccccccccccc
Confidence            23458888889999999999999999988 66 899999999999999882     236999999999999999999999


Q ss_pred             CCchhh----HHHHHHHHHHHhhc--------ccccC--ccCCChhhHHHHHHHHHHHHHHHHHHHHHHhccc----CCC
Q 038621          186 KDEVLY----REDLKRCYYILEKG--------YNSMP--INLPGTLFHKSMKARKELAQIVAKIISTRRQMKL----DHN  247 (477)
Q Consensus       186 ~~~~~~----~~~~~~~~~~~~~~--------~~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~  247 (477)
                      .+....    ...+.+.+..+...        ...+|  .+++....++..++++.+.+++.+.++++++...    ...
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  239 (463)
T PF00067_consen  160 KDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLPTPLFRRFKRARDRLRKYIKEIIEERREELDDGDESRR  239 (463)
T ss_dssp             SHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHSSSSSCS
T ss_pred             ceeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            864411    12233333333211        11122  2245555666667788999999999999887632    457


Q ss_pred             ChHHhhhhcC------CCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcChhHHHHHHHHHHHHhhhcccCCccccC
Q 038621          248 DLLGSFMGAK------EGLTDEQIADNIIGVIFAARDTTASALTWIVKYLGENPGVLQAVTEEQEAIIKSKEKSGEEEVL  321 (477)
Q Consensus       248 d~l~~ll~~~------~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~  321 (477)
                      |+++.+++..      ..++++++.+++..+++||+|||+.+++|++++|++||++|+++++|++++.+.    +  ..+
T Consensus       240 d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~----~--~~~  313 (463)
T PF00067_consen  240 DLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGD----G--REI  313 (463)
T ss_dssp             SHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTT----S--SSH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc----c--ccc
Confidence            9999999764      268999999999999999999999999999999999999999999999999743    1  468


Q ss_pred             ChhhcCCCchHHHHHHhhhcCCCCcc-ccceeeeccceeCCEEeCCCCEEeecccccccCCCCCCCCCCCCCCCCCCC--
Q 038621          322 SWADTKKMPITSRVIQETLRVASILS-FTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSPEIFPDPEKFDPSRFEVS--  398 (477)
Q Consensus       322 ~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~--  398 (477)
                      +.+++++||||+|||+||||++|+++ .+.|++.+|++++||.|||||.|+++.+++|+||++|+||++|+||||++.  
T Consensus       314 ~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~  393 (463)
T PF00067_consen  314 TFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDERG  393 (463)
T ss_dssp             HHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTTTS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            89999999999999999999999999 677999999999999999999999999999999999999999999999986  


Q ss_pred             ---CCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCeEEEecCCCcc-cc--cccccCCCCccEEE
Q 038621          399 ---PKPNTFMPFGNGTHSCPGNELAKLEILVLLHHLTTKYRWTVVGTNTGI-QY--GPFALPMNGLPIRL  462 (477)
Q Consensus       399 ---~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~-~~--~~~~~~~~~~~v~~  462 (477)
                         ..+..++|||.|+|.|||+++|++|+++++|.|+++||+++.++.... ..  ..+..|+.++.|.|
T Consensus       394 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  463 (463)
T PF00067_consen  394 ISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQNGFLLPPKPLKVKF  463 (463)
T ss_dssp             TBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEECSCSSSEEESSSEEEE
T ss_pred             ccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCccccCceEeeCCCcEEeC
Confidence               357889999999999999999999999999999999999997654322 22  23666666677765


No 28 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=4.2e-68  Score=486.66  Aligned_cols=429  Identities=21%  Similarity=0.350  Sum_probs=355.5

Q ss_pred             CCCCCCCCCccccccccchhc---cccCchHHHHHHHHhhCCeEEEe-ecCccEEEEcCHHHHHHHHhhCCccccc--Cc
Q 038621           32 RNLPLPPGTLGWPYIGETFEL---YSQNPNVFFASKVKRYGSIFKTH-ILGCPCVMISSPEAAKFVLVTRAHLFKP--TF  105 (477)
Q Consensus        32 ~~~~~ppgp~~~P~~G~~~~~---~~~~~~~~~~~~~~~yG~i~~i~-~~~~~~vvv~~~~~~~~il~~~~~~~~~--~~  105 (477)
                      +++..+|||.++|++|.++.+   -..+.++.....+++||+||+.. +|+...|.+.||++++.++..++...-.  ..
T Consensus        47 r~~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~~P~Rp~~~  126 (519)
T KOG0159|consen   47 RPFEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGKYPFRPLLI  126 (519)
T ss_pred             CChhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCCCCCccccc
Confidence            445567999999999999843   22466888999999999999999 8889999999999999999988753211  11


Q ss_pred             -h-hhhhhhhc-CCceeecCChhHHHhHHHHHhc-CCHHHHHhhHHHHHHHHHHHHHHh----c----CCcccHHHHHHH
Q 038621          106 -P-ASKERMIG-KQAIFFHQGDYHIKLRKLVLRA-FMPEAIKNIIPDIECIAKDSLQSW----Q----GRLINTYQEMKI  173 (477)
Q Consensus       106 -~-~~~~~~~g-~~~~~~~~g~~w~~~R~~~~~~-~~~~~l~~~~~~~~~~~~~~l~~~----~----~~~v~~~~~~~~  173 (477)
                       + ....+.++ ..|+++.+|+.|.+.|..+++. ++++.++.|.+.+++.+++++..+    .    ..+.|+.+.+.+
T Consensus       127 ~~w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~  206 (519)
T KOG0159|consen  127 EPWVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYR  206 (519)
T ss_pred             chhhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHH
Confidence             1 22334444 6889999999999999999986 678999999999999999988876    1    336789999999


Q ss_pred             HHHHHHHHHhcCCCc-------hhhHHHHHHHHHHHhhc---cccc-Ccc--CCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 038621          174 YTFNVALLSIFGKDE-------VLYREDLKRCYYILEKG---YNSM-PIN--LPGTLFHKSMKARKELAQIVAKIISTRR  240 (477)
Q Consensus       174 ~~~~~~~~~~fG~~~-------~~~~~~~~~~~~~~~~~---~~~~-~~~--~p~~~~~~~~~~~~~~~~~~~~~i~~~~  240 (477)
                      ++++.+|.++||.+.       ++....+.++...+...   +... ++|  ++.+.|++..++.+.+.+...+.|++..
T Consensus       207 wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~~p~l~r~~~t~~wk~~~~~~D~i~~~~~~~Id~~l  286 (519)
T KOG0159|consen  207 WSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLMLMPSLWRYFPTKVWKDFVRAWDQIFDVGDKYIDNAL  286 (519)
T ss_pred             HHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHhcchHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999852       23344555554444332   1222 222  6777789999999999888888888776


Q ss_pred             hcc----c---CCCChHHhhhhcCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcChhHHHHHHHHHHHHhhhcc
Q 038621          241 QMK----L---DHNDLLGSFMGAKEGLTDEQIADNIIGVIFAARDTTASALTWIVKYLGENPGVLQAVTEEQEAIIKSKE  313 (477)
Q Consensus       241 ~~~----~---~~~d~l~~ll~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~  313 (477)
                      +.-    .   +..+.+..++.. ..++.+++..++.++++||.|||+.++.|+||.|++||++|+++++|+.++.+.+.
T Consensus       287 ~~l~~~~~~~~~~~~~l~~~L~~-~~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~~~~p~~~  365 (519)
T KOG0159|consen  287 EELEKQDSAGSEYTGSLLELLLR-KELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREEILAVLPSGN  365 (519)
T ss_pred             HHHHhccccccchhHHHHHHHHH-ccCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHHhhCCCcc
Confidence            541    1   112233333332 46899999999999999999999999999999999999999999999999986532


Q ss_pred             cCCccccCChhhcCCCchHHHHHHhhhcCCCCccccceeeeccceeCCEEeCCCCEEeecccccccCCCCCCCCCCCCCC
Q 038621          314 KSGEEEVLSWADTKKMPITSRVIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSPEIFPDPEKFDPS  393 (477)
Q Consensus       314 ~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~Pe  393 (477)
                           ..++.+++.+||||+||||||+||||.+|+..|...+|..++||.|||||.|.++.+.+.+||++|++|++|+||
T Consensus       366 -----~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~F~Pe  440 (519)
T KOG0159|consen  366 -----SELTQKALTNMPYLRACIKETLRLYPVVPGNGRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEEFLPE  440 (519)
T ss_pred             -----cccchHHHhhCHHHHHHHHhhhceeccccccccccchhceeccceecCCCeEEEeehhhccChhhCCCccccChh
Confidence                 678999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCC----CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCeEEEecC-CCcccccccccCCCCccEEEEEcc
Q 038621          394 RFEVSP----KPNTFMPFGNGTHSCPGNELAKLEILVLLHHLTTKYRWTVVGT-NTGIQYGPFALPMNGLPIRLAQKS  466 (477)
Q Consensus       394 R~l~~~----~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~r~  466 (477)
                      |||++.    ++..++|||.|+|+|+|+++|++|+-+++|+++++|+++..++ +.......+..|..++..+|++|+
T Consensus       441 RWL~~~~~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~pv~~~~~~il~P~~~l~f~f~~r~  518 (519)
T KOG0159|consen  441 RWLKPSTKTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEEPVEYVYRFILVPNRPLRFKFRPRN  518 (519)
T ss_pred             hhcccccCCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCCCccceeEEEEcCCCCcceeeeeCC
Confidence            999863    6778999999999999999999999999999999999999874 445556788899988999999886


No 29 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=1.6e-67  Score=517.04  Aligned_cols=428  Identities=21%  Similarity=0.349  Sum_probs=341.4

Q ss_pred             CCCCCccccccccchhcc----ccCchHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHhhCCcccccCchh-hhh
Q 038621           36 LPPGTLGWPYIGETFELY----SQNPNVFFASKVKRYGSIFKTHILGCPCVMISSPEAAKFVLVTRAHLFKPTFPA-SKE  110 (477)
Q Consensus        36 ~ppgp~~~P~~G~~~~~~----~~~~~~~~~~~~~~yG~i~~i~~~~~~~vvv~~~~~~~~il~~~~~~~~~~~~~-~~~  110 (477)
                      +=.|..|||++|..+++.    .+.++..+.+++++||++|++++|+.+.|+++||+++++++.+.+..|...... ...
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~   92 (489)
T PLN02936         13 LWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSE   92 (489)
T ss_pred             cCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhH
Confidence            346788999999887663    356789999999999999999999999999999999999998765566554332 222


Q ss_pred             hhhcCCceeecCChhHHHhHHHHHhcCCHHHHHhhHH-HHHHHHHHHHHHh-----cCCcccHHHHHHHHHHHHHHHHhc
Q 038621          111 RMIGKQAIFFHQGDYHIKLRKLVLRAFMPEAIKNIIP-DIECIAKDSLQSW-----QGRLINTYQEMKIYTFNVALLSIF  184 (477)
Q Consensus       111 ~~~g~~~~~~~~g~~w~~~R~~~~~~~~~~~l~~~~~-~~~~~~~~~l~~~-----~~~~v~~~~~~~~~~~~~~~~~~f  184 (477)
                      ..+| .++++.+|+.|+++|+++++.|+...+..+.+ .+.+.++.+++.+     .++++|+.++++.+++++++.++|
T Consensus        93 ~~~~-~~i~~~~g~~wk~~Rk~l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~~~~f  171 (489)
T PLN02936         93 FLFG-SGFAIAEGELWTARRRAVVPSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIGLSVF  171 (489)
T ss_pred             HHhc-CccccCCchHHHHHHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHc
Confidence            3455 77888899999999999999999988888755 6777788887776     256899999999999999999999


Q ss_pred             CCCchhh--HHHHHHHHHH----Hh-hcccccCcc-CC-----ChhhHHHHHHHHHHHHHHHHHHHHHHhc----c----
Q 038621          185 GKDEVLY--REDLKRCYYI----LE-KGYNSMPIN-LP-----GTLFHKSMKARKELAQIVAKIISTRRQM----K----  243 (477)
Q Consensus       185 G~~~~~~--~~~~~~~~~~----~~-~~~~~~~~~-~p-----~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~----  243 (477)
                      |.+.+..  ...+.+.+..    .. .....+|.+ .+     .+..++..++.+.+.+++.+.++++++.    .    
T Consensus       172 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~  251 (489)
T PLN02936        172 NYNFDSLTTDSPVIQAVYTALKEAETRSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIVEAEGEVIE  251 (489)
T ss_pred             CCCccccccCcHHHHHHHHHHHHHHHhhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence            9875421  1112222111    11 111112211 00     1123455667778888888888765532    0    


Q ss_pred             ------cCCCChHHhhhhcCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcChhHHHHHHHHHHHHhhhcccCCc
Q 038621          244 ------LDHNDLLGSFMGAKEGLTDEQIADNIIGVIFAARDTTASALTWIVKYLGENPGVLQAVTEEQEAIIKSKEKSGE  317 (477)
Q Consensus       244 ------~~~~d~l~~ll~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~  317 (477)
                            ....|+++.|++..+.++++++.+++.++++||+|||+++++|++++|++||++|+++++|++++++.      
T Consensus       252 ~~~~~~~~~~d~l~~ll~~~~~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~------  325 (489)
T PLN02936        252 GEEYVNDSDPSVLRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQG------  325 (489)
T ss_pred             cccccccCchHHHHHHHhccccCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcC------
Confidence                  12357899998876679999999999999999999999999999999999999999999999999753      


Q ss_pred             cccCChhhcCCCchHHHHHHhhhcCCCCccccc-eeeeccceeCCEEeCCCCEEeecccccccCCCCCCCCCCCCCCCCC
Q 038621          318 EEVLSWADTKKMPITSRVIQETLRVASILSFTF-REAVEDVEYEGYLIPKGWKVLPLFRNIHHSPEIFPDPEKFDPSRFE  396 (477)
Q Consensus       318 ~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~-r~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeR~l  396 (477)
                       ..++++++++||||+|||+||||++|++|... |.+.+|+.++||.||||+.|+++.+++||||++|+||++|+||||+
T Consensus       326 -~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeRwl  404 (489)
T PLN02936        326 -RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPERFD  404 (489)
T ss_pred             -CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCccccCccccC
Confidence             34789999999999999999999999998766 5556777789999999999999999999999999999999999999


Q ss_pred             CCC-------CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCeEEEecCCCc-ccccccccCCCCccEEEEEccCC
Q 038621          397 VSP-------KPNTFMPFGNGTHSCPGNELAKLEILVLLHHLTTKYRWTVVGTNTG-IQYGPFALPMNGLPIRLAQKSKD  468 (477)
Q Consensus       397 ~~~-------~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~r~~~  468 (477)
                      .+.       .+..++|||.|+|.|+|+++|++|++++++.|+++|++++.+++.. ...+.+..|+++++|++++|...
T Consensus       405 ~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~~  484 (489)
T PLN02936        405 LDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQDIVMTTGATIHTTNGLYMTVSRRRVP  484 (489)
T ss_pred             CCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCccceecceEEeeCCCeEEEEEeeeCC
Confidence            531       2357999999999999999999999999999999999999865431 22245677888999999999865


Q ss_pred             ccc
Q 038621          469 KSE  471 (477)
Q Consensus       469 ~~~  471 (477)
                      -.+
T Consensus       485 ~~~  487 (489)
T PLN02936        485 DGD  487 (489)
T ss_pred             CCC
Confidence            443


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=2.6e-65  Score=500.47  Aligned_cols=413  Identities=23%  Similarity=0.338  Sum_probs=328.7

Q ss_pred             ccccccchhccccCchHHHHHHHHhhC-CeEEEeecCccEEEEcCHHHHHHHHhhCCcccccCch--hhhhhhhcCCcee
Q 038621           43 WPYIGETFELYSQNPNVFFASKVKRYG-SIFKTHILGCPCVMISSPEAAKFVLVTRAHLFKPTFP--ASKERMIGKQAIF  119 (477)
Q Consensus        43 ~P~~G~~~~~~~~~~~~~~~~~~~~yG-~i~~i~~~~~~~vvv~~~~~~~~il~~~~~~~~~~~~--~~~~~~~g~~~~~  119 (477)
                      .++.|+....+ .+...++..+.++++ .+++++.++.  ++++||+.+++++.++...|.....  ......+| .|++
T Consensus        49 ~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g-~gi~  124 (502)
T PLN02426         49 AYLTASWAKDF-DNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLG-RGIF  124 (502)
T ss_pred             CCccHHHHHhc-ccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcC-Ccee
Confidence            35778887753 466777777888887 5778776564  8999999999999887555643322  23335566 7899


Q ss_pred             ecCChhHHHhHHHHHhcCCHHHHHhhH--HHHHHHHHHHHHHh----c---CCcccHHHHHHHHHHHHHHHHhcCCCchh
Q 038621          120 FHQGDYHIKLRKLVLRAFMPEAIKNII--PDIECIAKDSLQSW----Q---GRLINTYQEMKIYTFNVALLSIFGKDEVL  190 (477)
Q Consensus       120 ~~~g~~w~~~R~~~~~~~~~~~l~~~~--~~~~~~~~~~l~~~----~---~~~v~~~~~~~~~~~~~~~~~~fG~~~~~  190 (477)
                      +.+|+.|+++||.+++.|+..+++.+.  +.+++..+++++.+    +   +.++|+.++++++++|+++.++||.+.+.
T Consensus       125 ~~~g~~wk~~Rk~l~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~  204 (502)
T PLN02426        125 NVDGDSWRFQRKMASLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDPGC  204 (502)
T ss_pred             ecCcHHHHHHHHHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCCcc
Confidence            999999999999999999999888764  56666666666554    1   25699999999999999999999986432


Q ss_pred             h-----HHHHHHHHHHHhh-----cccccCc------cCCChhhHHHHHHHHHHHHHHHHHHHHHHhcc-cCCCChHHhh
Q 038621          191 Y-----REDLKRCYYILEK-----GYNSMPI------NLPGTLFHKSMKARKELAQIVAKIISTRRQMK-LDHNDLLGSF  253 (477)
Q Consensus       191 ~-----~~~~~~~~~~~~~-----~~~~~~~------~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~d~l~~l  253 (477)
                      .     ..++.+.+..+..     ....+|+      +++....++..++.+.+.+++.+.++++++.. ....|+++.+
T Consensus       205 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~~~~~dll~~l  284 (502)
T PLN02426        205 LELSLPISEFADAFDTASKLSAERAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLGFSASKDLLSRF  284 (502)
T ss_pred             cCCCCCccHHHHHHHHHHHHHHHHHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhcccCCcchHHHHH
Confidence            1     1233333332211     1111121      12222234566778889999999999887642 2357999999


Q ss_pred             hhcCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcChhHHHHHHHHHHHHhhhcccCCccccCChhhcCCCchHH
Q 038621          254 MGAKEGLTDEQIADNIIGVIFAARDTTASALTWIVKYLGENPGVLQAVTEEQEAIIKSKEKSGEEEVLSWADTKKMPITS  333 (477)
Q Consensus       254 l~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~lp~l~  333 (477)
                      ++..  .+++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++.+..   .  ..++++++++||||+
T Consensus       285 l~~~--~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~---~--~~~t~~~l~~LpYl~  357 (502)
T PLN02426        285 MASI--NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPN---Q--EAASFEEMKEMHYLH  357 (502)
T ss_pred             HhcC--CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCC---C--CCCCHHHHhcChHHH
Confidence            9763  47889999999999999999999999999999999999999999999987542   1  458999999999999


Q ss_pred             HHHHhhhcCCCCccccceeeecccee-CCEEeCCCCEEeecccccccCCCCC-CCCCCCCCCCCCCC-----CCCCCccc
Q 038621          334 RVIQETLRVASILSFTFREAVEDVEY-EGYLIPKGWKVLPLFRNIHHSPEIF-PDPEKFDPSRFEVS-----PKPNTFMP  406 (477)
Q Consensus       334 a~i~E~lRl~p~~~~~~r~~~~d~~i-~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~PeR~l~~-----~~~~~~~~  406 (477)
                      |||+|+||++|++|...|.+.+|.++ +|+.|||||.|.++.+++||||++| +||++|+||||+++     ..+..++|
T Consensus       358 avi~EtLRl~p~v~~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~~~~~~~~~~p  437 (502)
T PLN02426        358 AALYESMRLFPPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVFVPENPFKYPV  437 (502)
T ss_pred             HHHHHHHhCCCCCCCcceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCCcCCCCCcccCC
Confidence            99999999999999878999999887 8999999999999999999999999 99999999999973     23457899


Q ss_pred             cCCCCCCCccHHHHHHHHHHHHHHHHhcCeEEEecCCC---cccccccccCCCCccEEEEEcc
Q 038621          407 FGNGTHSCPGNELAKLEILVLLHHLTTKYRWTVVGTNT---GIQYGPFALPMNGLPIRLAQKS  466 (477)
Q Consensus       407 Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~---~~~~~~~~~~~~~~~v~~~~r~  466 (477)
                      ||+|+|.|+|+++|++|++++++.|+++|++++.+++.   ....+.+.+|++|++|++++|.
T Consensus       438 Fg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~r~  500 (502)
T PLN02426        438 FQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLTATVRGGLPVRVRERV  500 (502)
T ss_pred             CCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCcccceeEEecCCCEEEEEEEcc
Confidence            99999999999999999999999999999999865432   2223567889999999999883


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=3e-61  Score=464.39  Aligned_cols=391  Identities=20%  Similarity=0.346  Sum_probs=299.5

Q ss_pred             CCCCCCCCCccccccccchhcc----ccCchHHHHHHHHhhCC-eEEEeecCccE-------EEEcCHHHHHHHHhh---
Q 038621           32 RNLPLPPGTLGWPYIGETFELY----SQNPNVFFASKVKRYGS-IFKTHILGCPC-------VMISSPEAAKFVLVT---   96 (477)
Q Consensus        32 ~~~~~ppgp~~~P~~G~~~~~~----~~~~~~~~~~~~~~yG~-i~~i~~~~~~~-------vvv~~~~~~~~il~~---   96 (477)
                      .+.+.|||+.|||++|+..+|+    ..++..|+.+.++|||+ ||+++++|.++       |+++|+++++.+|..   
T Consensus        14 ~~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~   93 (480)
T PLN02648         14 LPLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKV   93 (480)
T ss_pred             CCCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhc
Confidence            4456699999999999998653    35668999999999999 99999998655       999999999999975   


Q ss_pred             -CCcccccCchhhhhhhhcCC---ceeecCChhHHHhHHHHHhcCCHHHHHhhHHHHHHHHHHHHHHhc-----CCcccH
Q 038621           97 -RAHLFKPTFPASKERMIGKQ---AIFFHQGDYHIKLRKLVLRAFMPEAIKNIIPDIECIAKDSLQSWQ-----GRLINT  167 (477)
Q Consensus        97 -~~~~~~~~~~~~~~~~~g~~---~~~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~-----~~~v~~  167 (477)
                       +...+...++.... ++|..   +++..+|+.|+++|+++.+.|+ ..++.+.+.+.+.++++++.|+     ++.+|+
T Consensus        94 ~~~~~~~~~~~~~~~-l~G~~~~~s~~~~~g~~H~r~Rrll~~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~~~~~vdv  171 (480)
T PLN02648         94 DKRDVFTGTYMPSTA-FTGGYRVLSYLDPSEPKHAKLKSFLFELLK-SRHRRFIPEFRAAFAELFDTWEAELAKKGKAEF  171 (480)
T ss_pred             cccccceeeeccCcc-ccCCceeeeecCCCCchHHHHHHHHHHHHH-HhhhhhhhHHHHHHHHHHHHHHHHHhhCCCccc
Confidence             44445444454554 78865   7777899999999999999999 5778899999999999999993     347999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHHhhcccc---cCcc---CCChhhH-----------HHHHHHHHHHH
Q 038621          168 YQEMKIYTFNVALLSIFGKDEVLYREDLKRCYYILEKGYNS---MPIN---LPGTLFH-----------KSMKARKELAQ  230 (477)
Q Consensus       168 ~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~p~~~~~-----------~~~~~~~~~~~  230 (477)
                      .+.+..++++++++++||.+.+.  ..+.+.+..+...+..   +|..   ++....+           ...+..+.+.+
T Consensus       172 ~~~~~~lt~~vi~~~lfG~~~~~--~~l~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~  249 (480)
T PLN02648        172 NDPLDQMAFNFLCKALTGKDPSE--TALGSDGPALIQKWLALQLAPLASTGLPHVLEELLLHTFPLPFFLVKSDYDKLYD  249 (480)
T ss_pred             cchHHHHHHHHHHHHHcCCCcch--hhhccchhHHHHHHHHHHhhHHHHcCchHHHHHHhhcccCCchhhhhccHHHHHH
Confidence            99999999999999999986544  1222222111111100   1110   1100000           00011122222


Q ss_pred             HHHHHHHHHHhcccCCCChHHhhhhcCCCCCHHHHHHHHHH-HHhhcccchHHHHHHHHHHHhcChh-HHHHHHHHHHHH
Q 038621          231 IVAKIISTRRQMKLDHNDLLGSFMGAKEGLTDEQIADNIIG-VIFAARDTTASALTWIVKYLGENPG-VLQAVTEEQEAI  308 (477)
Q Consensus       231 ~~~~~i~~~~~~~~~~~d~l~~ll~~~~~~~~~~i~~~~~~-~~~ag~~tt~~~l~~~l~~L~~~p~-~~~~l~~Ei~~~  308 (477)
                      ++++.+.          ++++...+  .+++++++.++++. +.+++++|++++++|++++|++||+ +|+++++|++.+
T Consensus       250 ~~~~~~~----------~ll~~~~~--~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~~  317 (480)
T PLN02648        250 FFRASAT----------EALDLAEK--FGISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRAGEELQARLAEEVRSA  317 (480)
T ss_pred             HHHHHHH----------HHHHHHHh--cCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence            2222211          12222111  35899999999875 4567788888999999999999995 999999999999


Q ss_pred             hhhcccCCccccCChhhcCCCchHHHHHHhhhcCCCCccccceeeeccceeC----CEEeCCCCEEeecccccccCCCCC
Q 038621          309 IKSKEKSGEEEVLSWADTKKMPITSRVIQETLRVASILSFTFREAVEDVEYE----GYLIPKGWKVLPLFRNIHHSPEIF  384 (477)
Q Consensus       309 ~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~i~----g~~ip~G~~v~~~~~~~~~d~~~~  384 (477)
                      .+..   +  ..++++++++|||+++||+|+||++|++++..|++.+|++++    ||.||||+.|+++.+.+||||++|
T Consensus       318 ~~~~---~--~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~  392 (480)
T PLN02648        318 VKAG---G--GGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFVIESHDAAFEIKKGEMLFGYQPLVTRDPKVF  392 (480)
T ss_pred             hccC---C--CCCCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCEEEecCCceEEECCCCEEEEChHHHhCCcccC
Confidence            7531   1  458999999999999999999999999998889999999996    799999999999999999999999


Q ss_pred             CCCCCCCCCCCCCC--CCCCCcccc---------CCCCCCCccHHHHHHHHHHHHHHHHhcCe-EEEecCC
Q 038621          385 PDPEKFDPSRFEVS--PKPNTFMPF---------GNGTHSCPGNELAKLEILVLLHHLTTKYR-WTVVGTN  443 (477)
Q Consensus       385 ~~p~~F~PeR~l~~--~~~~~~~~F---------g~G~r~C~G~~lA~~~~~~~l~~ll~~f~-~~~~~~~  443 (477)
                      +||++|+||||+++  .....+++|         |+|+|.|+|+++|++|++++++.|+++|+ +++.++.
T Consensus       393 ~dP~~F~PeRf~~~~~~~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~~~l~~~~  463 (480)
T PLN02648        393 DRPEEFVPDRFMGEEGEKLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDSFEIEVDT  463 (480)
T ss_pred             CCcceeCCCCCCCCCccccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCEEeecCCc
Confidence            99999999999864  222345555         56779999999999999999999999998 9986553


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=3.1e-55  Score=418.01  Aligned_cols=375  Identities=29%  Similarity=0.486  Sum_probs=306.1

Q ss_pred             chHHHHHHHHhhCCeEEEeecCcc--EEEEcCHHHHHHHHhhCCcccccCch-----hhhhhhhcCCceeecCChhHHHh
Q 038621           57 PNVFFASKVKRYGSIFKTHILGCP--CVMISSPEAAKFVLVTRAHLFKPTFP-----ASKERMIGKQAIFFHQGDYHIKL  129 (477)
Q Consensus        57 ~~~~~~~~~~~yG~i~~i~~~~~~--~vvv~~~~~~~~il~~~~~~~~~~~~-----~~~~~~~g~~~~~~~~g~~w~~~  129 (477)
                      +......+.+.||.++.++..++.  ++++++++++++++.++. .++....     ......+|..++++.||+.|.++
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~  102 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRL  102 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHH
Confidence            445566677889999988876655  899999999999998875 2222211     11345666455888999999999


Q ss_pred             HHHHHhcCCHHHHHhhHHHHHHHHHHHHHHhc-CCcccHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHHhhcccc
Q 038621          130 RKLVLRAFMPEAIKNIIPDIECIAKDSLQSWQ-GRLINTYQEMKIYTFNVALLSIFGKDEVLYREDLKRCYYILEKGYNS  208 (477)
Q Consensus       130 R~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~  208 (477)
                      ||+++++|+++.++++.+.+.+.++++++.+. ++..++.++...+++++++ .+||...++...........+.. .. 
T Consensus       103 Rkl~~~~F~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~~~~~~~~~~~~~~-~~-  179 (411)
T COG2124         103 RKLLAPAFTPRALRGYRPLIREIADRLLDDLWQGGADLVLDFAAELTLRVIA-ELLGVPLEDRPQLLRWSDALLLR-LD-  179 (411)
T ss_pred             HHHhccccCHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHhhhhhHHHHH-HHhCCCHHHHHHHHHHHHHHHhc-cC-
Confidence            99999999999999999999999999999873 3567789999999999999 99998655543333332222222 11 


Q ss_pred             cCccCCChhhHHHHHHHHHHHHHHHHHHHHHHhcccCCCChHHhhhhcCC----CCCHHHHHHHHHHHHhhcccchHHHH
Q 038621          209 MPINLPGTLFHKSMKARKELAQIVAKIISTRRQMKLDHNDLLGSFMGAKE----GLTDEQIADNIIGVIFAARDTTASAL  284 (477)
Q Consensus       209 ~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~l~~ll~~~~----~~~~~~i~~~~~~~~~ag~~tt~~~l  284 (477)
                       +...+.....+..++.+.+.+++.++|++++..  ...|+++.++.+.+    .++++|+.++++++++||+|||++++
T Consensus       180 -~~~~~~~~~~~~~~a~~~~~~~~~~li~~rR~~--~~~dlls~l~~a~~~~~~~lsd~Ei~~~~~~ll~AGheTTa~~l  256 (411)
T COG2124         180 -PDLGPEEPWRRARAARRELDAYLRALIAERRAA--PRDDLLSLLLSAEDDGGGRLSDDEIRDELITLLVAGHETTANAL  256 (411)
T ss_pred             -cccCCcccHHHHHHHHHHHHHHHHHHHHHhccC--CcccHHHHHHHHhhCCCCcCCHHHHHHHHHHHHHhhhHHHHHHH
Confidence             333333446678889999999999999999943  34799999986642    38999999999999999999999999


Q ss_pred             HHHHHHHhcChhHHHHHHHHHHHHhhhcccCCccccCChhhcCCCchHHHHHHhhhcCCCCccccceeeeccceeCCEEe
Q 038621          285 TWIVKYLGENPGVLQAVTEEQEAIIKSKEKSGEEEVLSWADTKKMPITSRVIQETLRVASILSFTFREAVEDVEYEGYLI  364 (477)
Q Consensus       285 ~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~i~g~~i  364 (477)
                      +|+++.|++||++++++++|.+.                      ||++++++|+||++||++...|.+.+|++++|+.|
T Consensus       257 ~~a~~~L~~~P~~~~~l~~e~~~----------------------~~~~~~v~E~LR~~ppv~~~~R~~~~d~~igg~~I  314 (411)
T COG2124         257 AWALYALLRHPDQLAKLRAEPDR----------------------PLLEAVVEETLRLYPPVPLARRVATEDVELGGYRI  314 (411)
T ss_pred             HHHHHHHHHCchHHHHHHhCcch----------------------HHHHHHHHHHHHhCCchhccceeccCCEeeCCEEe
Confidence            99999999999999999888532                      67899999999999999986699999999999999


Q ss_pred             CCCCEEeecccccccCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhcCeEEEecCCC
Q 038621          365 PKGWKVLPLFRNIHHSPEIFPDPEKFDPSRFEVSPKPNTFMPFGNGTHSCPGNELAKLEILVLLHHLTTKYRWTVVGTNT  444 (477)
Q Consensus       365 p~G~~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~  444 (477)
                      |||+.|+++.+++||||++|++|++|+||||.     ..++|||+|+|.|+|++||++|++++++.++++|++....++.
T Consensus       315 p~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~-----~~~l~FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~~~  389 (411)
T COG2124         315 PAGTVVLLSIGAANRDPEVFPDPDEFDPERFN-----NAHLPFGGGPHRCLGAALARLELKVALAELLRRFPLLLLAEPP  389 (411)
T ss_pred             CCCCEEEecHhhhcCChhhCCChhhcCCCCCC-----CCCcCCCCCCccccCHHHHHHHHHHHHHHHHHhCchhhcCCCC
Confidence            99999999999999999999999999999988     8899999999999999999999999999999999987765521


Q ss_pred             cccccccccCCCCccEEEEEc
Q 038621          445 GIQYGPFALPMNGLPIRLAQK  465 (477)
Q Consensus       445 ~~~~~~~~~~~~~~~v~~~~r  465 (477)
                      ......+..+..+..+.++.+
T Consensus       390 ~~~~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         390 PLVRRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             CccccccccCCCcceeeeecC
Confidence            122345555555555555544


No 33 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=66.32  E-value=2.4  Score=35.88  Aligned_cols=44  Identities=25%  Similarity=0.263  Sum_probs=33.1

Q ss_pred             CCchHHHHHHhhhcCCCCccccceeeeccceeCCEEeCCCCEEee
Q 038621          328 KMPITSRVIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLP  372 (477)
Q Consensus       328 ~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~i~g~~ip~G~~v~~  372 (477)
                      .-..+.|||.|+.-..-..- +--+..+|+.++|..|||||.++.
T Consensus        51 ~~n~I~A~V~~~qtv~~Gs~-vrlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDGSR-VRLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCCeEEEEEecceEEeCCCE-EEEEEcCceEECCEEeCCCCEEEE
Confidence            34567899999987655421 223567899999999999998876


No 34 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=64.28  E-value=5.8  Score=25.93  Aligned_cols=8  Identities=38%  Similarity=0.680  Sum_probs=6.4

Q ss_pred             CCCCCCCC
Q 038621          391 DPSRFEVS  398 (477)
Q Consensus       391 ~PeR~l~~  398 (477)
                      ||||||.-
T Consensus        44 DPERWLP~   51 (59)
T PF08492_consen   44 DPERWLPK   51 (59)
T ss_pred             CccccCch
Confidence            78999864


No 35 
>PF02468 PsbN:  Photosystem II reaction centre N protein (psbN);  InterPro: IPR003398 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection [].   This family represents the low molecular weight transmembrane protein PsbN found in PSII. PsbN may have a role in PSII stability, however its actual function unknown. PsbN does not appear to be essential for photoautotrophic growth or normal PSII function.; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane
Probab=54.02  E-value=23  Score=21.39  Aligned_cols=35  Identities=9%  Similarity=0.165  Sum_probs=13.9

Q ss_pred             CCchhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 038621            1 MDFTFLFLLPFASICFILCFYLFLKFISSNGRNLP   35 (477)
Q Consensus         1 m~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~~~~~   35 (477)
                      |+-.+++.+.++.+++.+..+-+|.-+..+++..+
T Consensus         1 Me~a~~~~i~i~~~lv~~Tgy~iYtaFGppSk~Lr   35 (43)
T PF02468_consen    1 METATVLAIFISCLLVSITGYAIYTAFGPPSKELR   35 (43)
T ss_pred             CCceeeHHHHHHHHHHHHHhhhhhheeCCCccccC
Confidence            55444444433333333323333444434444333


No 36 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=53.12  E-value=14  Score=23.99  Aligned_cols=19  Identities=47%  Similarity=0.669  Sum_probs=16.2

Q ss_pred             HHHHHHhcChhHHHHHHHH
Q 038621          286 WIVKYLGENPGVLQAVTEE  304 (477)
Q Consensus       286 ~~l~~L~~~p~~~~~l~~E  304 (477)
                      -++.||.+||++.+++.+.
T Consensus         4 ~iV~YLv~nPevl~kl~~g   22 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEG   22 (57)
T ss_pred             HHHHHHHHChHHHHHHHcC
Confidence            4678999999999999764


No 37 
>PHA03049 IMV membrane protein; Provisional
Probab=51.19  E-value=49  Score=22.02  Aligned_cols=37  Identities=11%  Similarity=0.262  Sum_probs=16.7

Q ss_pred             HHHHHHHHHHHHHHHhhcCCCCCCCCCCCcccccccc
Q 038621           12 ASICFILCFYLFLKFISSNGRNLPLPPGTLGWPYIGE   48 (477)
Q Consensus        12 ~~l~~~~~~~~~~~~~~~~~~~~~~ppgp~~~P~~G~   48 (477)
                      .++|++++.+++|-.+.+.......||.|--.+-.-+
T Consensus         8 ~iICVaIi~lIvYgiYnkk~~~q~~~p~~e~ye~~e~   44 (68)
T PHA03049          8 VIICVVIIGLIVYGIYNKKTTTSQNPPSQEKYEKMED   44 (68)
T ss_pred             HHHHHHHHHHHHHHHHhcccccCCCCCChhhccCchh
Confidence            4455444444445454444444444554433333333


No 38 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=48.39  E-value=58  Score=20.32  Aligned_cols=42  Identities=21%  Similarity=0.236  Sum_probs=30.8

Q ss_pred             HHHHHHHHHHhhcccchHHHHHHHHHHHhcChhHHHHHHHHH
Q 038621          264 QIADNIIGVIFAARDTTASALTWIVKYLGENPGVLQAVTEEQ  305 (477)
Q Consensus       264 ~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei  305 (477)
                      ++...+..++-.|.|..+-.+.--+...--||+..+.+-+|+
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            445556666677777777777777777778999888887775


No 39 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=46.53  E-value=6.5  Score=37.28  Aligned_cols=44  Identities=18%  Similarity=0.126  Sum_probs=33.0

Q ss_pred             CchHHHHHHhhhcCCCCccccceeeeccceeCCEEeCCCCEEeec
Q 038621          329 MPITSRVIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLPL  373 (477)
Q Consensus       329 lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~i~g~~ip~G~~v~~~  373 (477)
                      -..+.|||.|+.-+.-.. .+--+..+|+.++|..|||||.|+..
T Consensus       255 ~n~I~A~V~~~qtv~~G~-~vrlRLle~~~v~~~~ipkgt~l~g~  298 (410)
T TIGR03779       255 RNTIRACVHETQTVVDGS-AVKLRLLEPIQAGDLVIPKGTVLYGT  298 (410)
T ss_pred             CCceEEEEcCceEEecCC-EEEEEEcCceeeCCEEecCCCEEEEE
Confidence            455789999998875432 22235678999999999999987654


No 40 
>PF05961 Chordopox_A13L:  Chordopoxvirus A13L protein;  InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=40.40  E-value=89  Score=20.97  Aligned_cols=19  Identities=11%  Similarity=0.272  Sum_probs=8.8

Q ss_pred             HHHHHHHHHHHHHHHHhhc
Q 038621           11 FASICFILCFYLFLKFISS   29 (477)
Q Consensus        11 ~~~l~~~~~~~~~~~~~~~   29 (477)
                      +.++|++++.+++|-.+.+
T Consensus         7 Li~ICVaii~lIlY~iYnr   25 (68)
T PF05961_consen    7 LIIICVAIIGLILYGIYNR   25 (68)
T ss_pred             HHHHHHHHHHHHHHHHHhc
Confidence            3445554444444444433


No 41 
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=38.66  E-value=22  Score=26.14  Aligned_cols=64  Identities=25%  Similarity=0.398  Sum_probs=37.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCccccccccchhccccCchHHHHHHHHhhCCeEEE
Q 038621            8 LLPFASICFILCFYLFLKFISSNGRNLPLPPGTLGWPYIGETFELYSQNPNVFFASKVKRYGSIFKT   74 (477)
Q Consensus         8 ll~~~~l~~~~~~~~~~~~~~~~~~~~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~yG~i~~i   74 (477)
                      +..++.++=+.-.+++.+|.+..++..=.+||--.+.++|-+..+   .+...+-+.+..||.||-+
T Consensus         7 ~f~lAalaEI~Gcyl~WlWLR~gks~~~~l~g~~sL~lf~~llT~---~~~~a~GRvYAAYGGvyI~   70 (109)
T COG1742           7 LFVLAALAEIGGCYLVWLWLRLGKSALWLLPGALSLALFGWLLTL---QPAAAFGRVYAAYGGVYIA   70 (109)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHcCCchHhHHHHHHHHHHHHHHHHc---CCchhhhhHHHHhcchHHH
Confidence            333455665655666667776666655455554444445544443   4445566677889988753


No 42 
>PF15102 TMEM154:  TMEM154 protein family
Probab=36.69  E-value=22  Score=28.23  Aligned_cols=13  Identities=23%  Similarity=0.764  Sum_probs=5.3

Q ss_pred             hhHHHHHHHHHHH
Q 038621            6 LFLLPFASICFIL   18 (477)
Q Consensus         6 ~~ll~~~~l~~~~   18 (477)
                      +.+++++++++++
T Consensus        60 mIlIP~VLLvlLL   72 (146)
T PF15102_consen   60 MILIPLVLLVLLL   72 (146)
T ss_pred             EEeHHHHHHHHHH
Confidence            3344444443333


No 43 
>PF11138 DUF2911:  Protein of unknown function (DUF2911);  InterPro: IPR021314  This bacterial family of proteins has no known function. 
Probab=31.74  E-value=57  Score=26.11  Aligned_cols=42  Identities=19%  Similarity=0.248  Sum_probs=26.9

Q ss_pred             eeeccceeCCEEeCCCCEEeeccc-------ccccCCCCCCCCCCCCCCC
Q 038621          352 EAVEDVEYEGYLIPKGWKVLPLFR-------NIHHSPEIFPDPEKFDPSR  394 (477)
Q Consensus       352 ~~~~d~~i~g~~ip~G~~v~~~~~-------~~~~d~~~~~~p~~F~PeR  394 (477)
                      .-.+|++++|..||+|+.-+....       .+|++...|.. ..++|+.
T Consensus        51 ~f~~dv~igGk~l~AG~Ysl~tiP~~~~WtvI~n~~~~~wG~-~~Y~~~~   99 (145)
T PF11138_consen   51 TFSKDVTIGGKKLKAGTYSLFTIPGEDEWTVIFNKDTDQWGA-YNYDPSK   99 (145)
T ss_pred             EECCCeEECCEEcCCeeEEEEEecCCCeEEEEEECCCCccCc-cccCchh
Confidence            445789999999999997655432       23556556644 4444444


No 44 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=31.58  E-value=84  Score=24.50  Aligned_cols=40  Identities=18%  Similarity=0.199  Sum_probs=31.6

Q ss_pred             chHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHhhCC
Q 038621           57 PNVFFASKVKRYGSIFKTHILGCPCVMISSPEAAKFVLVTRA   98 (477)
Q Consensus        57 ~~~~~~~~~~~yG~i~~i~~~~~~~vvv~~~~~~~~il~~~~   98 (477)
                      ....+.+|.++||.+--..  +...+...|++.++++...+.
T Consensus        76 v~~~i~~w~~~~g~v~l~~--~~~~l~~~d~~~l~~l~~~~~  115 (129)
T PF13625_consen   76 VEQSIEDWARRYGRVRLYK--GAYLLECDDPELLDELLADPE  115 (129)
T ss_pred             HHHHHHHHHHhcCCEEEec--CeEEEEECCHHHHHHHHhChh
Confidence            3467899999999876532  577888999999999987654


No 45 
>PRK02237 hypothetical protein; Provisional
Probab=31.30  E-value=21  Score=26.61  Aligned_cols=66  Identities=23%  Similarity=0.375  Sum_probs=34.4

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCccccccccchhccccCchHHHHHHHHhhCCeEE
Q 038621            5 FLFLLPFASICFILCFYLFLKFISSNGRNLPLPPGTLGWPYIGETFELYSQNPNVFFASKVKRYGSIFK   73 (477)
Q Consensus         5 ~~~ll~~~~l~~~~~~~~~~~~~~~~~~~~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~yG~i~~   73 (477)
                      ++.+..++.++=+.-.++.+.+.+..++..=..||--.+-.+|-+..+   .|...+-+.+.-||.||-
T Consensus         5 ~~~lF~laalaEI~Gcyl~w~wlR~~ks~~~~~pg~~~L~lfg~llTl---~p~~~~GRvYAAYGGvyI   70 (109)
T PRK02237          5 SILLFVLAALAEIGGCYLPWLWLREGKSAWWLLPGALSLALFGWLLTL---QPDAAFGRVYAAYGGVYV   70 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHhc---CCchhhhhHHHHhhhHHH
Confidence            344444555665555566666665443322233443333334444443   232337778888998774


No 46 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=30.47  E-value=1.4e+02  Score=18.73  Aligned_cols=34  Identities=21%  Similarity=0.257  Sum_probs=24.2

Q ss_pred             HHHHHhhCCeEEEeecC----ccEEEEcCHHHHHHHHh
Q 038621           62 ASKVKRYGSIFKTHILG----CPCVMISSPEAAKFVLV   95 (477)
Q Consensus        62 ~~~~~~yG~i~~i~~~~----~~~vvv~~~~~~~~il~   95 (477)
                      .++..+||+|-.+.+..    .-+|-..+.+.++.+..
T Consensus         2 ~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~   39 (56)
T PF13893_consen    2 YKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE   39 (56)
T ss_dssp             HHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred             hHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence            45678999999888744    34666678888887775


No 47 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=30.45  E-value=2.2e+02  Score=21.30  Aligned_cols=63  Identities=21%  Similarity=0.130  Sum_probs=39.4

Q ss_pred             CCCCCCCCccccccccchhccccCchHHHHHHHHhhCCeEEEeecC------ccEEEEcCHHHHHHHHhhCC
Q 038621           33 NLPLPPGTLGWPYIGETFELYSQNPNVFFASKVKRYGSIFKTHILG------CPCVMISSPEAAKFVLVTRA   98 (477)
Q Consensus        33 ~~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~yG~i~~i~~~~------~~~vvv~~~~~~~~il~~~~   98 (477)
                      +.+.||--..+-++-|+.-   +=-.+.+-++.-+||+|.+|++|.      .-+||-.|-..++....+=+
T Consensus        10 ~~rlppevnriLyirNLp~---~ITseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dhls   78 (124)
T KOG0114|consen   10 NIRLPPEVNRILYIRNLPF---KITSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDHLS   78 (124)
T ss_pred             CCCCChhhheeEEEecCCc---cccHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHHhc
Confidence            3445554444444444421   122355667788999999999864      45777777777777765433


No 48 
>PF02694 UPF0060:  Uncharacterised BCR, YnfA/UPF0060 family;  InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=29.86  E-value=37  Score=25.25  Aligned_cols=64  Identities=27%  Similarity=0.421  Sum_probs=35.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCccccccccchhccccCchHHHHHHHHhhCCeEE
Q 038621            6 LFLLPFASICFILCFYLFLKFISSNGRNLPLPPGTLGWPYIGETFELYSQNPNVFFASKVKRYGSIFK   73 (477)
Q Consensus         6 ~~ll~~~~l~~~~~~~~~~~~~~~~~~~~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~yG~i~~   73 (477)
                      +.+..++.++=+.--+++..+.+..++..=..||--.+-.+|-+..+   .| ..+-+.+.-||.||-
T Consensus         5 ~~lF~lAalaEIgG~yl~W~wlR~~k~~~~~~~G~~~L~lfg~l~Tl---~p-~~fGRvYAAYGGvfI   68 (107)
T PF02694_consen    5 LLLFVLAALAEIGGCYLVWLWLREGKSPWWLLPGALSLALFGWLLTL---QP-AAFGRVYAAYGGVFI   68 (107)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCeeeHhhHHHHHHHHHHHhhc---Cc-ccchhHHHHhhhhHH
Confidence            33444455565555556666665554443344554434444544443   34 556777888998774


No 49 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=28.49  E-value=45  Score=26.08  Aligned_cols=24  Identities=25%  Similarity=0.498  Sum_probs=17.3

Q ss_pred             CCCccHHHHHHHHHHHHHHHHhcC
Q 038621          412 HSCPGNELAKLEILVLLHHLTTKY  435 (477)
Q Consensus       412 r~C~G~~lA~~~~~~~l~~ll~~f  435 (477)
                      -+|.|+.+|+..+-.++..|+..-
T Consensus        18 yN~~gKKFsE~QiN~FIs~lItsP   41 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITSP   41 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS-
T ss_pred             ecccchHHHHHHHHHHHHHHhcCC
Confidence            489999999999999999998764


No 50 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=28.27  E-value=91  Score=18.33  Aligned_cols=17  Identities=18%  Similarity=0.430  Sum_probs=11.2

Q ss_pred             HHHHHh-cChhHHHHHHH
Q 038621          287 IVKYLG-ENPGVLQAVTE  303 (477)
Q Consensus       287 ~l~~L~-~~p~~~~~l~~  303 (477)
                      ++..++ +|||+++.+++
T Consensus        18 lL~~l~~~HPei~~~i~~   35 (38)
T PF14483_consen   18 LLQSLCERHPEIQQEIRS   35 (38)
T ss_dssp             HHHHHHHHSTHHHHHHHT
T ss_pred             HHHHHHHhChhHHHHHHh
Confidence            344444 89999887754


No 51 
>PF10717 ODV-E18:  Occlusion-derived virus envelope protein ODV-E18;  InterPro: IPR019655  Baculovirus occlusion-derived virus (ODV) derives its envelope from an intranuclear membrane source. Occlusion-derived viral envelope proteins that are detected in viral-induced intranuclear microvesicles, but not detected in the plasma membrane, cytoplasmic membranes, or the nuclear envelope. This entry represents ODV-E18 protein which is encoded by baculovirus late genes with transcription initiating from a TAAG motif. ODV-E18 exists as a dimer in the ODV envelope, which contains a hydrophobic domain that putatively acts as a target or retention signal for intranuclear microvesicles []. ; GO: 0019031 viral envelope
Probab=28.01  E-value=1.5e+02  Score=20.95  Aligned_cols=12  Identities=8%  Similarity=0.373  Sum_probs=4.6

Q ss_pred             HHHHHHHHHHHH
Q 038621           11 FASICFILCFYL   22 (477)
Q Consensus        11 ~~~l~~~~~~~~   22 (477)
                      ++++++++++++
T Consensus        31 LivLVIIiLlIm   42 (85)
T PF10717_consen   31 LIVLVIIILLIM   42 (85)
T ss_pred             HHHHHHHHHHHH
Confidence            333444443333


No 52 
>PRK06789 flagellar motor switch protein; Validated
Probab=26.36  E-value=76  Score=22.00  Aligned_cols=40  Identities=13%  Similarity=0.123  Sum_probs=29.6

Q ss_pred             HHHHhhhcCCCCccccc-eeeecc--ceeCCEEeCCCCEEeec
Q 038621          334 RVIQETLRVASILSFTF-REAVED--VEYEGYLIPKGWKVLPL  373 (477)
Q Consensus       334 a~i~E~lRl~p~~~~~~-r~~~~d--~~i~g~~ip~G~~v~~~  373 (477)
                      --++|-+.|.+..-.-. |.+.++  +.++|..|.+|..|.++
T Consensus        20 ~~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         20 KKIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             eEHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            34788899988754333 666664  45689999999998876


No 53 
>PF14459 Prok-E2_C:  Prokaryotic E2 family C
Probab=25.86  E-value=77  Score=23.50  Aligned_cols=25  Identities=24%  Similarity=0.335  Sum_probs=18.7

Q ss_pred             CCCCccccCCCCCCCccHHHHHHHH
Q 038621          400 KPNTFMPFGNGTHSCPGNELAKLEI  424 (477)
Q Consensus       400 ~~~~~~~Fg~G~r~C~G~~lA~~~~  424 (477)
                      .....+|||.|.-.|.|..-....+
T Consensus       103 ~gss~~p~GaGaAaC~aAaNvFR~i  127 (131)
T PF14459_consen  103 CGSSNNPFGAGAAACFAAANVFRHI  127 (131)
T ss_pred             cCcccCCcCccHHHHHHHHHHHHHH
Confidence            4567899999999999975544433


No 54 
>PF01102 Glycophorin_A:  Glycophorin A;  InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=25.60  E-value=67  Score=24.83  Aligned_cols=8  Identities=13%  Similarity=0.223  Sum_probs=3.3

Q ss_pred             HHHHHHHH
Q 038621            8 LLPFASIC   15 (477)
Q Consensus         8 ll~~~~l~   15 (477)
                      +..+++++
T Consensus        68 ~Ii~gv~a   75 (122)
T PF01102_consen   68 GIIFGVMA   75 (122)
T ss_dssp             HHHHHHHH
T ss_pred             ehhHHHHH
Confidence            33344444


No 55 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=25.40  E-value=33  Score=21.82  Aligned_cols=10  Identities=50%  Similarity=1.172  Sum_probs=8.3

Q ss_pred             ccCCCCCCCc
Q 038621          406 PFGNGTHSCP  415 (477)
Q Consensus       406 ~Fg~G~r~C~  415 (477)
                      +||-|.|.|-
T Consensus        13 kfg~GsrsC~   22 (56)
T KOG3506|consen   13 KFGQGSRSCR   22 (56)
T ss_pred             ccCCCCccee
Confidence            6999999873


No 56 
>PHA02681 ORF089 virion membrane protein; Provisional
Probab=24.47  E-value=2e+02  Score=20.17  Aligned_cols=9  Identities=22%  Similarity=0.154  Sum_probs=3.9

Q ss_pred             CCchhhhHH
Q 038621            1 MDFTFLFLL    9 (477)
Q Consensus         1 m~~~~~~ll    9 (477)
                      |.+..-|++
T Consensus         1 Mgl~Da~~~    9 (92)
T PHA02681          1 MGLLDALLT    9 (92)
T ss_pred             CchHHHHHH
Confidence            444444443


No 57 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=22.02  E-value=2.6e+02  Score=20.11  Aligned_cols=34  Identities=15%  Similarity=0.186  Sum_probs=22.4

Q ss_pred             chHHHHHHHHHHHhc-------ChhHHHHHHHHHHHHhhhc
Q 038621          279 TTASALTWIVKYLGE-------NPGVLQAVTEEQEAIIKSK  312 (477)
Q Consensus       279 tt~~~l~~~l~~L~~-------~p~~~~~l~~Ei~~~~~~~  312 (477)
                      +|+...--=|..++.       .|+..+.+|+||-+++...
T Consensus        13 ~Sa~~AkeRLQiilA~eR~~~~~pd~l~~Lr~eIl~VI~KY   53 (88)
T COG0851          13 NSAETAKERLQLILAHERAAGLQPDYLEQLRKEILEVISKY   53 (88)
T ss_pred             CcHHHHHHHHHHhhhhhhhcCCCcchHHHHHHHHHHHHHHH
Confidence            455444444433333       3889999999999998764


No 58 
>KOG2376 consensus Signal recognition particle, subunit Srp72 [Intracellular trafficking, secretion, and vesicular transport]
Probab=21.88  E-value=60  Score=32.39  Aligned_cols=37  Identities=19%  Similarity=0.266  Sum_probs=21.0

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCcc
Q 038621          380 SPEIFPDPEKFDPSRFEVSPKPNTFMPFGNGTHSCPG  416 (477)
Q Consensus       380 d~~~~~~p~~F~PeR~l~~~~~~~~~~Fg~G~r~C~G  416 (477)
                      +|+.|..--+=||||||.-.....|-|=..|+|.-.|
T Consensus       571 ~pknyn~~~tPDPERWLP~reRS~yr~KrK~k~~~~~  607 (652)
T KOG2376|consen  571 LPKNYNPKVTPDPERWLPRRERSTYRPKRKGKRAAII  607 (652)
T ss_pred             CcccCCCCCCCChhhcccchhccccCcccccchhhhh
Confidence            3444422233457888876566667766666664433


No 59 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=21.55  E-value=4.7e+02  Score=25.83  Aligned_cols=48  Identities=15%  Similarity=0.259  Sum_probs=23.5

Q ss_pred             CchHHHHHHH-HhhCCeEEEeecCccEEEEcCHHHHHHHHhhCCccccc
Q 038621           56 NPNVFFASKV-KRYGSIFKTHILGCPCVMISSPEAAKFVLVTRAHLFKP  103 (477)
Q Consensus        56 ~~~~~~~~~~-~~yG~i~~i~~~~~~~vvv~~~~~~~~il~~~~~~~~~  103 (477)
                      +|...+.-.. -+||.|+.-.+-++.+-|=.=|.--++-+.+....|+.
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~l  258 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYSL  258 (534)
T ss_pred             CchhhHHHhhcCccceeehhhccCceeEEEecCHHHHHHHHhHHHHHhc
Confidence            3444444333 35778887666554443333333333444444445554


No 60 
>PF07849 DUF1641:  Protein of unknown function (DUF1641);  InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long. 
Probab=20.80  E-value=1.2e+02  Score=18.20  Aligned_cols=20  Identities=10%  Similarity=-0.054  Sum_probs=15.4

Q ss_pred             HHHHHHHHhcChhHHHHHHH
Q 038621          284 LTWIVKYLGENPGVLQAVTE  303 (477)
Q Consensus       284 l~~~l~~L~~~p~~~~~l~~  303 (477)
                      -.|-++.++++||+|.-+.-
T Consensus        12 gl~gl~~~l~DpdvqrgL~~   31 (42)
T PF07849_consen   12 GLFGLLRALRDPDVQRGLGF   31 (42)
T ss_pred             CHHHHHHHHcCHHHHHHHHH
Confidence            35677888999999887753


Done!