BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038622
(587 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 996 bits (2574), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/585 (79%), Positives = 535/585 (91%), Gaps = 2/585 (0%)
Query: 1 LKLVETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTT 60
LKLVE +HA M GIKPDVSTFN+LIKALC+AHQ+RPAILM+E+MP YGL PDE+TFTT
Sbjct: 170 LKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTT 229
Query: 61 LMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSE- 119
+MQG IEEG+LDGALRIREQMVE GC +NV+VNV+VHGFCKEGR+EDAL+FIQEM ++
Sbjct: 230 VMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQD 289
Query: 120 GFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEA 179
GF PDQ+T+NTLVNGLCK GHVK A+E+MD+MLQEG+DPDV+TYNS+ISGLCKLGEV+EA
Sbjct: 290 GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEA 349
Query: 180 VEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 239
VE+L+QMI RDCSPNT+TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG
Sbjct: 350 VEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 409
Query: 240 LCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARN 299
LCLT N VAMELF+EM++KGC+PDEFTYNMLIDSLCS+G L+EAL +LK+ME SGCAR+
Sbjct: 410 LCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS 469
Query: 300 VVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMD 359
V+TYNTLIDGFCK + EAEEIFDEME+ G+SRNSVTYNTLIDGLCKSRRVEDAAQLMD
Sbjct: 470 VITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMD 529
Query: 360 QMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAG 419
QMIMEG KPDK+TYNSLLT++CR GDIK+AADIVQ MTSNGCEPDIVTYGTLI GLCKAG
Sbjct: 530 QMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAG 589
Query: 420 RVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKAD-PPDALTY 478
RVEVASKLLRSIQMKGI LTP AYNPVIQ LFR+++TTEA+ LFREM+E+ + PPDA++Y
Sbjct: 590 RVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSY 649
Query: 479 KHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELIDMVM 538
+ VFRGLCNGGGPI EAVDF++E+LE+GF+PEFSS YMLAEGL++L EETLV+L++MVM
Sbjct: 650 RIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVM 709
Query: 539 DKAKFSDRETSMVRGFLKIRKFQDALATFGDILDSRMPRKTFRSR 583
KA+FS+ E SMV+G LKIRKFQDALAT G +LDSR PR+T+RSR
Sbjct: 710 QKARFSEEEVSMVKGLLKIRKFQDALATLGGVLDSRQPRRTYRSR 754
Score = 122 bits (306), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 182/417 (43%), Gaps = 75/417 (17%)
Query: 228 PDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEE---- 283
P+ + ++ L + +FD ++ ++MK+ C+ T+ +LI+S + +E
Sbjct: 81 PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 140
Query: 284 ----------------------------ALKLLK----EMESSGCARNVVTYNTLIDGFC 311
+LKL++ +M G +V T+N LI C
Sbjct: 141 VDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALC 200
Query: 312 KLKRIEEAEEIFDEMEIQGI-----------------------------------SRNSV 336
+ ++ A + ++M G+ S ++V
Sbjct: 201 RAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNV 260
Query: 337 TYNTLIDGLCKSRRVEDAAQLMDQMI-MEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQN 395
+ N ++ G CK RVEDA + +M +G PD++T+N+L+ C+AG +K A +I+
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 396 MTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKR 455
M G +PD+ TY ++I GLCK G V+ A ++L + + YN +I L + +
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 456 TTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFY 515
EA L R + K PD T+ + +GLC A++ EM +G P+ ++
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH-RVAMELFEEMRSKGCEPDEFTYN 439
Query: 516 MLAEGLVSLGK-EETLVELIDMVMDK-AKFSDRETSMVRGFLKIRKFQDALATFGDI 570
ML + L S GK +E L L M + A+ +++ GF K K ++A F ++
Sbjct: 440 MLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM 496
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 151/360 (41%), Gaps = 41/360 (11%)
Query: 248 VAMELFQ-EMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTL 306
A+ LF K P+ Y ++ L G ++ K+L++M+SS C T+ L
Sbjct: 65 AALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLIL 124
Query: 307 IDGFCKLKRIEEAEEIFD------------------------------------EMEIQG 330
I+ + + + +E + D +M + G
Sbjct: 125 IESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWG 184
Query: 331 ISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAA 390
I + T+N LI LC++ ++ A +++ M GL PD+ T+ +++ Y GD+ A
Sbjct: 185 IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGAL 244
Query: 391 DIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMK-GIVLTPQAYNPVIQA 449
I + M GC V+ ++ G CK GRVE A ++ + + G +N ++
Sbjct: 245 RIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNG 304
Query: 450 LFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLP 509
L + A+ + M+++ PD TY V GLC G + EAV+ + +M+ R P
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCK-LGEVKEAVEVLDQMITRDCSP 363
Query: 510 EFSSFYMLAEGLVSLGKEETLVELIDMVMDKAKFSDRET--SMVRGFLKIRKFQDALATF 567
++ L L + E EL ++ K D T S+++G R + A+ F
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 332 bits (850), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 181/533 (33%), Positives = 293/533 (54%), Gaps = 1/533 (0%)
Query: 2 KLVETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTL 61
+LV M S+GI + T +I+I C+ ++ A M ++ G PD F TL
Sbjct: 105 ELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTL 164
Query: 62 MQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGF 121
+ GL E + AL + ++MVE G T +T+N LV+G C G++ DA+ I MV GF
Sbjct: 165 LNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGF 224
Query: 122 NPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVE 181
P++ TY ++N +CK G A+E++ M + D Y+ +I GLCK G ++ A
Sbjct: 225 QPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFN 284
Query: 182 ILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 241
+ N+M ++ + ITYNTLI C + ++ +L R + + I P+V TF+ LI
Sbjct: 285 LFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFV 344
Query: 242 LTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVV 301
A +L +EM +G P+ TYN LID C LEEA++++ M S GC +++
Sbjct: 345 KEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIM 404
Query: 302 TYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 361
T+N LI+G+CK RI++ E+F EM ++G+ N+VTYNTL+ G C+S ++E A +L +M
Sbjct: 405 TFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464
Query: 362 IMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRV 421
+ ++PD +Y LL C G++++A +I + + E DI Y +I G+C A +V
Sbjct: 465 VSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKV 524
Query: 422 EVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHV 481
+ A L S+ +KG+ L +AYN +I L R+ ++A LFR+M E+ PD LTY +
Sbjct: 525 DDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNIL 584
Query: 482 FRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELI 534
R G A + + EM GF + S+ M+ L S +++ ++++
Sbjct: 585 IRAHL-GDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDML 636
Score = 267 bits (682), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 133/418 (31%), Positives = 233/418 (55%)
Query: 72 DGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTL 131
D A+ + M++ L T + N L K + E L+ ++M S+G +T + +
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 132 VNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDC 191
+N C+ + A M +++ G++PD +N+L++GLC V EA+E++++M+
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 192 SPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAME 251
P IT NTL++ LC +V +A L + G P+ T+ ++ +C + +AME
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 252 LFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFC 311
L ++M+ + + D Y+++ID LC G L+ A L EME G +++TYNTLI GFC
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309
Query: 312 KLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKF 371
R ++ ++ +M + IS N VT++ LID K ++ +A QL+ +M+ G+ P+
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369
Query: 372 TYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSI 431
TYNSL+ +C+ ++ A +V M S GC+PDI+T+ LI G CKA R++ +L R +
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM 429
Query: 432 QMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGG 489
++G++ YN ++Q + + A +LF+EM+ + PD ++YK + GLC+ G
Sbjct: 430 SLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNG 487
Score = 169 bits (427), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 187/378 (49%), Gaps = 3/378 (0%)
Query: 192 SPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAME 251
S ++Y +S+ + ++A +L R + LP V FN L + T +++ +
Sbjct: 50 SDRNLSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLA 109
Query: 252 LFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFC 311
L ++M++KG +T +++I+ C L A + ++ G + V +NTL++G C
Sbjct: 110 LCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLC 169
Query: 312 KLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKF 371
R+ EA E+ D M G +T NTL++GLC + +V DA L+D+M+ G +P++
Sbjct: 170 LECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEV 229
Query: 372 TYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSI 431
TY +L C++G A ++++ M + D V Y +I GLCK G ++ A L +
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 289
Query: 432 QMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGP 491
++KG YN +I R + +L R+M+++ P+ +T+ + G
Sbjct: 290 EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVK-EGK 348
Query: 492 IGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELIDMVMDKAKFSDRET--S 549
+ EA + EM++RG P ++ L +G + E ++++D+++ K D T
Sbjct: 349 LREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNI 408
Query: 550 MVRGFLKIRKFQDALATF 567
++ G+ K + D L F
Sbjct: 409 LINGYCKANRIDDGLELF 426
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 152/285 (53%)
Query: 10 DMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEG 69
+M+ RGI P+ T+N LI CK +++ AI M++ M G PD TF L+ G +
Sbjct: 358 EMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKAN 417
Query: 70 NLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYN 129
+D L + +M G + VT N LV GFC+ G++E A QEMVS PD +Y
Sbjct: 418 RIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYK 477
Query: 130 TLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILR 189
L++GLC G +++ALE+ + + + D+ Y +I G+C +V++A ++ + L+
Sbjct: 478 ILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLK 537
Query: 190 DCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVA 249
+ YN +IS LC+++ + +A L R +T +G PD T+N LI+ + A
Sbjct: 538 GVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTA 597
Query: 250 MELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESS 294
EL +EMK+ G D T M+I+ L S + + L +L +S
Sbjct: 598 AELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDMLSTTRAS 642
Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 85/179 (47%), Gaps = 1/179 (0%)
Query: 1 LKLVETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTT 60
L++ + +MVSR ++PD+ ++ IL+ LC ++ A+ + ++ + D +
Sbjct: 454 LEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMI 513
Query: 61 LMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEG 120
++ G+ +D A + + G + N+++ C++ + A ++M EG
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEG 573
Query: 121 FNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEA 179
PD+ TYN L+ A E+++ M GF DV T +I+ L GE++++
Sbjct: 574 HAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSS-GELDKS 631
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 328 bits (840), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 164/492 (33%), Positives = 277/492 (56%), Gaps = 4/492 (0%)
Query: 62 MQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGF 121
++ ++ G L+ + E MV HG + + L+ GFC+ G+ A ++ + G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 122 NPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVE 181
PD TYN +++G CK G + AL V+D M PDV TYN+++ LC G++++A+E
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 182 ILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 241
+L++M+ RDC P+ ITY LI C+++ V A +L + +G PDV T+N L+ G+C
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 242 LTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVV 301
D A++ +M + GCQP+ T+N+++ S+CS G +A KLL +M G + +VV
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 302 TYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 361
T+N LI+ C+ + A +I ++M G NS++YN L+ G CK ++++ A + +++M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 362 IMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRV 421
+ G PD TYN++LT C+ G ++ A +I+ ++S GC P ++TY T+I GL KAG+
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465
Query: 422 EVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHV 481
A KLL ++ K + Y+ ++ L R + EA++ F E P+A+T+ +
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI 525
Query: 482 FRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELIDMVMDKA 541
GLC A+DF++ M+ RG P +S+ +L EGL G + +EL++ + +K
Sbjct: 526 MLGLCKSR-QTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Query: 542 KFSDRETSMVRG 553
V G
Sbjct: 585 LMKKSSAEQVAG 596
Score = 301 bits (770), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 163/495 (32%), Positives = 276/495 (55%), Gaps = 5/495 (1%)
Query: 19 DVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGALRIR 78
DV + N L + + + ++ +E M +G PD TTL++G G A +I
Sbjct: 102 DVESNNHL-RQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKIL 160
Query: 79 EQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCKV 138
E + G + +T NV++ G+CK G I +ALS + M +PD TYNT++ LC
Sbjct: 161 EILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDS 217
Query: 139 GHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTITY 198
G +KQA+EV+D MLQ PDV TY LI C+ V A+++L++M R C+P+ +TY
Sbjct: 218 GKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTY 277
Query: 199 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKT 258
N L++ +CKE +++EA + + S G P+V T N +++ +C T + A +L +M
Sbjct: 278 NVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR 337
Query: 259 KGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIEE 318
KG P T+N+LI+ LC +G+L A+ +L++M GC N ++YN L+ GFCK K+++
Sbjct: 338 KGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDR 397
Query: 319 AEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLT 378
A E + M +G + VTYNT++ LCK +VEDA ++++Q+ +G P TYN+++
Sbjct: 398 AIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVID 457
Query: 379 YYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVL 438
+AG +A ++ M + +PD +TY +L+GGL + G+V+ A K + GI
Sbjct: 458 GLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRP 517
Query: 439 TPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDF 498
+N ++ L + ++T A+ M+ + P+ +Y + GL G EA++
Sbjct: 518 NAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAY-EGMAKEALEL 576
Query: 499 VIEMLERGFLPEFSS 513
+ E+ +G + + S+
Sbjct: 577 LNELCNKGLMKKSSA 591
Score = 280 bits (716), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 147/461 (31%), Positives = 245/461 (53%), Gaps = 3/461 (0%)
Query: 10 DMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEG 69
+MV G PD+ LI+ C+ + R A ++E + G G PD T+ ++ G + G
Sbjct: 127 NMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAG 186
Query: 70 NLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYN 129
++ AL + ++M + VT N ++ C G+++ A+ + M+ PD TY
Sbjct: 187 EINNALSVLDRMSVSPDV---VTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYT 243
Query: 130 TLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILR 189
L+ C+ V A++++D M G PDV TYN L++G+CK G ++EA++ LN M
Sbjct: 244 ILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS 303
Query: 190 DCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVA 249
C PN IT+N ++ ++C + +A +L + KG P V TFN LI LC A
Sbjct: 304 GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRA 363
Query: 250 MELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDG 309
+++ ++M GCQP+ +YN L+ C ++ A++ L+ M S GC ++VTYNT++
Sbjct: 364 IDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTA 423
Query: 310 FCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPD 369
CK ++E+A EI +++ +G S +TYNT+IDGL K+ + A +L+D+M + LKPD
Sbjct: 424 LCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPD 483
Query: 370 KFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLR 429
TY+SL+ R G + A G P+ VT+ +++ GLCK+ + + A L
Sbjct: 484 TITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLV 543
Query: 430 SIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKA 470
+ +G +Y +I+ L EA+ L E+ K
Sbjct: 544 FMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Score = 278 bits (711), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 133/428 (31%), Positives = 247/428 (57%), Gaps = 3/428 (0%)
Query: 15 GIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGA 74
G PDV T+N++I CKA +I A+ +++ M ++PD T+ T+++ L + G L A
Sbjct: 167 GAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQA 223
Query: 75 LRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNG 134
+ + ++M++ C +T +L+ C++ + A+ + EM G PD TYN LVNG
Sbjct: 224 MEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNG 283
Query: 135 LCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPN 194
+CK G + +A++ ++ M G P+V T+N ++ +C G +A ++L M+ + SP+
Sbjct: 284 ICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPS 343
Query: 195 TITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQ 254
+T+N LI+ LC++ + A ++ + G P+ ++N L+ G C D A+E +
Sbjct: 344 VVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE 403
Query: 255 EMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLK 314
M ++GC PD TYN ++ +LC G +E+A+++L ++ S GC+ ++TYNT+IDG K
Sbjct: 404 RMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG 463
Query: 315 RIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYN 374
+ +A ++ DEM + + +++TY++L+ GL + +V++A + + G++P+ T+N
Sbjct: 464 KTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFN 523
Query: 375 SLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMK 434
S++ C++ RA D + M + GC+P+ +Y LI GL G + A +LL + K
Sbjct: 524 SIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNK 583
Query: 435 GIVLTPQA 442
G++ A
Sbjct: 584 GLMKKSSA 591
Score = 250 bits (639), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/356 (34%), Positives = 208/356 (58%)
Query: 11 MVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGN 70
M+ R PDV T+ ILI+A C+ + A+ +++EM G PD T+ L+ G+ +EG
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 71 LDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNT 130
LD A++ M GC +T N+++ C GR DA + +M+ +GF+P T+N
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349
Query: 131 LVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRD 190
L+N LC+ G + +A+++++ M Q G P+ +YN L+ G CK +++ A+E L +M+ R
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Query: 191 CSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAM 250
C P+ +TYNT+++ LCK+ +VE+A E+ L+SKG P + T+N++I GL A+
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469
Query: 251 ELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGF 310
+L EM+ K +PD TY+ L+ L G ++EA+K E E G N VT+N+++ G
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 529
Query: 311 CKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGL 366
CK ++ + A + M +G N +Y LI+GL ++A +L++++ +GL
Sbjct: 530 CKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 210 bits (534), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 184/326 (56%)
Query: 10 DMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEG 69
+M RG PDV T+N+L+ +CK ++ AI + +MP G P+ T +++ + G
Sbjct: 264 EMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTG 323
Query: 70 NLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYN 129
A ++ M+ G + VT N+L++ C++G + A+ +++M G P+ +YN
Sbjct: 324 RWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYN 383
Query: 130 TLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILR 189
L++G CK + +A+E ++ M+ G PD+ TYN++++ LCK G+VE+AVEILNQ+ +
Sbjct: 384 PLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 443
Query: 190 DCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVA 249
CSP ITYNT+I L K + +A +L + +K + PD T++SL+ GL D A
Sbjct: 444 GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Query: 250 MELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDG 309
++ F E + G +P+ T+N ++ LC + A+ L M + GC N +Y LI+G
Sbjct: 504 IKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEG 563
Query: 310 FCKLKRIEEAEEIFDEMEIQGISRNS 335
+EA E+ +E+ +G+ + S
Sbjct: 564 LAYEGMAKEALELLNELCNKGLMKKS 589
Score = 182 bits (462), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 148/252 (58%)
Query: 9 ADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEE 68
ADM+ +G P V TFNILI LC+ + AI ++E+MP +G P+ ++ L+ G +E
Sbjct: 333 ADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKE 392
Query: 69 GNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTY 128
+D A+ E+MV GC VT N ++ CK+G++EDA+ + ++ S+G +P TY
Sbjct: 393 KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITY 452
Query: 129 NTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMIL 188
NT+++GL K G +A++++D M + PD TY+SL+ GL + G+V+EA++ ++
Sbjct: 453 NTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFER 512
Query: 189 RDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDV 248
PN +T+N+++ LCK Q + A + + ++G P+ ++ LI+GL
Sbjct: 513 MGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKE 572
Query: 249 AMELFQEMKTKG 260
A+EL E+ KG
Sbjct: 573 ALELLNELCNKG 584
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 324 bits (831), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 183/561 (32%), Positives = 286/561 (50%), Gaps = 71/561 (12%)
Query: 2 KLVETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTL 61
K+ DM+SR I P + TF +++KA C ++I A+ ++ +M +G P+ + TL
Sbjct: 199 KVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTL 258
Query: 62 MQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGF 121
+ L + ++ AL++ E+M GC+ T N ++ G CK RI +A + M+ GF
Sbjct: 259 IHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGF 318
Query: 122 NPDQFTYNTLVNGLCKVGHVKQALEVM--------------------------------D 149
PD TY L+NGLCK+G V A ++ D
Sbjct: 319 APDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSD 378
Query: 150 MMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKEN 209
M+ G PDV TYNSLI G K G V A+E+L+ M + C PN +Y L+ CK
Sbjct: 379 MVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLG 438
Query: 210 QVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYN 269
+++EA + +++ G+ P+ FN LI C A+E+F+EM KGC+PD +T+N
Sbjct: 439 KIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFN 498
Query: 270 MLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQ 329
LI LC ++ AL LL++M S G N VTYNTLI+ F + I+EA ++ +EM Q
Sbjct: 499 SLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQ 558
Query: 330 GISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRA 389
G + +TYN+LI GLC++ V+ A L ++M+ +G P + N L+ CR+G ++ A
Sbjct: 559 GSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEA 618
Query: 390 ADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQA 449
+ + M G PDIVT+ +LI GLC+AGR+E + R +Q +GI
Sbjct: 619 VEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI------------- 665
Query: 450 LFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLP 509
PPD +T+ + LC GG + +A + E +E GF+P
Sbjct: 666 ----------------------PPDTVTFNTLMSWLCKGGF-VYDACLLLDEGIEDGFVP 702
Query: 510 EFSSFYMLAEGLVSLGKEETL 530
++ +L + ++ +ETL
Sbjct: 703 NHRTWSILLQSIIP---QETL 720
Score = 200 bits (509), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 159/273 (58%)
Query: 10 DMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEG 69
+M + G+KP+ FN LI A CK H+I A+ + EMP G PD TF +L+ GL E
Sbjct: 449 EMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVD 508
Query: 70 NLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYN 129
+ AL + M+ G + VT N L++ F + G I++A + EMV +G D+ TYN
Sbjct: 509 EIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYN 568
Query: 130 TLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILR 189
+L+ GLC+ G V +A + + ML++G P + N LI+GLC+ G VEEAVE +M+LR
Sbjct: 569 SLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLR 628
Query: 190 DCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVA 249
+P+ +T+N+LI+ LC+ ++E+ + R L ++GI PD TFN+L+ LC A
Sbjct: 629 GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688
Query: 250 MELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLE 282
L E G P+ T+++L+ S+ + L+
Sbjct: 689 CLLLDEGIEDGFVPNHRTWSILLQSIIPQETLD 721
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/486 (26%), Positives = 223/486 (45%), Gaps = 37/486 (7%)
Query: 127 TYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQM 186
Y L+ L G K ++ M EG + S++ K G + ++ +M
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM 172
Query: 187 I-LRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSN 245
+ C P +YN ++ L N + A + + S+ I P + TF +++ C +
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE 232
Query: 246 FDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNT 305
D A+ L ++M GC P+ Y LI SL + EAL+LL+EM GC + T+N
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292
Query: 306 LIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDA----------- 354
+I G CK RI EA ++ + M I+G + + +TY L++GLCK RV+ A
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPE 352
Query: 355 ---------------------AQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIV 393
A L D + G+ PD TYNSL+ Y + G + A +++
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL 412
Query: 394 QNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRR 453
+M + GC+P++ +Y L+ G CK G+++ A +L + G+ +N +I A +
Sbjct: 413 HDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKE 472
Query: 454 KRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSS 513
R EA+ +FREM K PD T+ + GLC I A+ + +M+ G + +
Sbjct: 473 HRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE-VDEIKHALWLLRDMISEGVVANTVT 531
Query: 514 FYMLAEGLVSLGKEETLVELIDMVMDKAKFSDRET--SMVRGFLKIRKFQDALATFGDIL 571
+ L + G+ + +L++ ++ + D T S+++G + + A + F +L
Sbjct: 532 YNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKML 591
Query: 572 -DSRMP 576
D P
Sbjct: 592 RDGHAP 597
Score = 139 bits (350), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 173/386 (44%), Gaps = 14/386 (3%)
Query: 197 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEM 256
Y LI L + + L + +GI+ F S+++ L EM
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM 172
Query: 257 KT-KGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKR 315
+ C+P +YN++++ L S + A + +M S + T+ ++ FC +
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE 232
Query: 316 IEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNS 375
I+ A + +M G NSV Y TLI L K RV +A QL+++M + G PD T+N
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292
Query: 376 LLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKG 435
++ C+ I AA +V M G PD +TYG L+ GLCK GRV+ A L I
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPE 352
Query: 436 IVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKAD-PPDALTYKHVFRGLCNGGGPIGE 494
IV+ +N +I R +A + +M+ PD TY + G G +G
Sbjct: 353 IVI----FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK-EGLVGL 407
Query: 495 AVDFVIEMLERGFLPEFSSFYMLAEGLVSLGK-EETLVELIDMVMDKAKFSDRE-TSMVR 552
A++ + +M +G P S+ +L +G LGK +E L +M D K + ++
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLIS 467
Query: 553 GFLKIRKFQDALATFGDILDSRMPRK 578
F K + +A+ F + MPRK
Sbjct: 468 AFCKEHRIPEAVEIFRE-----MPRK 488
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 319 bits (817), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 169/488 (34%), Positives = 265/488 (54%)
Query: 1 LKLVETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTT 60
L L A M+ G +PD+ T + L+ C + +I A+ ++++M G PD TFTT
Sbjct: 134 LSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTT 193
Query: 61 LMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEG 120
L+ GL A+ + +QMV+ GC VT +V+G CK G I+ ALS +++M
Sbjct: 194 LIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGK 253
Query: 121 FNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAV 180
D YNT+++GLCK H+ AL + M +G PDVFTY+SLIS LC G +A
Sbjct: 254 IEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 313
Query: 181 EILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 240
+L+ MI R +PN +T++ LI KE ++ EA +L + + I PD+ T++SLI G
Sbjct: 314 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 373
Query: 241 CLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNV 300
C+ D A +F+ M +K C P+ TY+ LI C +EE ++L +EM G N
Sbjct: 374 CMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 433
Query: 301 VTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQ 360
VTY TLI GF + + + A+ +F +M G+ N +TYN L+DGLCK+ ++ A + +
Sbjct: 434 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY 493
Query: 361 MIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGR 420
+ ++PD +TYN ++ C+AG ++ ++ N++ G P+++ Y T+I G C+ G
Sbjct: 494 LQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGS 553
Query: 421 VEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKH 480
E A LL+ ++ G + YN +I+A R + L +EM DA T
Sbjct: 554 KEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGL 613
Query: 481 VFRGLCNG 488
V L +G
Sbjct: 614 VTNMLHDG 621
Score = 317 bits (813), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 175/513 (34%), Positives = 275/513 (53%), Gaps = 1/513 (0%)
Query: 1 LKLVETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTT 60
+LV + M + GI D+ T++I I C+ Q+ A+ ++ +M G PD T ++
Sbjct: 99 FELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSS 158
Query: 61 LMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEG 120
L+ G + A+ + +QMVE G T L+HG + +A++ + +MV G
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 121 FNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAV 180
PD TY T+VNGLCK G + AL ++ M + + DV YN++I GLCK +++A+
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDAL 278
Query: 181 EILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 240
+ +M + P+ TY++LIS LC + +A+ L + + I P+V TF++LI
Sbjct: 279 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 338
Query: 241 CLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNV 300
A +L+ EM + PD FTY+ LI+ C L+EA + + M S C NV
Sbjct: 339 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 398
Query: 301 VTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQ 360
VTY+TLI GFCK KR+EE E+F EM +G+ N+VTY TLI G ++R ++A + Q
Sbjct: 399 VTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 458
Query: 361 MIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGR 420
M+ G+ P+ TYN LL C+ G + +A + + + + EPDI TY +I G+CKAG+
Sbjct: 459 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 518
Query: 421 VEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKH 480
VE +L ++ +KG+ AYN +I R+ EA L ++M E P++ TY
Sbjct: 519 VEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNT 578
Query: 481 VFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSS 513
+ R G A + + EM GF + S+
Sbjct: 579 LIRARLRDGDREASA-ELIKEMRSCGFAGDAST 610
Score = 295 bits (755), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 168/526 (31%), Positives = 277/526 (52%), Gaps = 1/526 (0%)
Query: 9 ADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEE 68
DMV P + FN L+ A+ K ++ I + E+M G++ D T++ +
Sbjct: 72 GDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRR 131
Query: 69 GNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTY 128
L AL + +M++ G VT++ L++G+C RI DA++ + +MV G+ PD FT+
Sbjct: 132 SQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTF 191
Query: 129 NTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMIL 188
TL++GL +A+ ++D M+Q G PD+ TY ++++GLCK G+++ A+ +L +M
Sbjct: 192 TTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEK 251
Query: 189 RDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDV 248
+ + YNT+I LCK +++A L + +KGI PDV T++SLI LC +
Sbjct: 252 GKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD 311
Query: 249 AMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLID 308
A L +M + P+ T++ LID+ G L EA KL EM ++ TY++LI+
Sbjct: 312 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 371
Query: 309 GFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKP 368
GFC R++EA+ +F+ M + N VTY+TLI G CK++RVE+ +L +M GL
Sbjct: 372 GFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG 431
Query: 369 DKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLL 428
+ TY +L+ + +A D A + + M S G P+I+TY L+ GLCK G++ A +
Sbjct: 432 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF 491
Query: 429 RSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNG 488
+Q + YN +I+ + + + + LF + K P+ + Y + G C
Sbjct: 492 EYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRK 551
Query: 489 GGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELI 534
G EA + +M E G LP ++ L + G E ELI
Sbjct: 552 GSK-EEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELI 596
Score = 270 bits (691), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 147/464 (31%), Positives = 250/464 (53%), Gaps = 3/464 (0%)
Query: 71 LDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNT 130
+D A+ + MV+ + V N L+ K + E +S ++M + G + D +TY+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 131 LVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRD 190
+N C+ + AL V+ M++ G++PD+ T +SL++G C + +AV +++QM+
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 191 CSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAM 250
P+T T+ TLI L N+ EA L + +G PD+ T+ +++ GLC + D+A+
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 251 ELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGF 310
L ++M+ + D YN +ID LC +++AL L EM++ G +V TY++LI
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 311 CKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDK 370
C R +A + +M + I+ N VT++ LID K ++ +A +L D+MI + PD
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Query: 371 FTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRS 430
FTY+SL+ +C + A + + M S C P++VTY TLI G CKA RVE +L R
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFRE 423
Query: 431 IQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGG 490
+ +G+V Y +I F+ + A +F++M+ P+ LTY + GLC G
Sbjct: 424 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK-NG 482
Query: 491 PIGEAVDFVIEMLERGFL-PEFSSFYMLAEGLVSLGKEETLVEL 533
+ +A+ V E L+R + P+ ++ ++ EG+ GK E EL
Sbjct: 483 KLAKAM-VVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWEL 525
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 194/391 (49%), Gaps = 1/391 (0%)
Query: 131 LVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRD 190
L N L + V A+++ M++ P + +N L+S + K+ + E + + QM
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113
Query: 191 CSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAM 250
S + TY+ I+ C+ +Q+ A + + G PD+ T +SL+ G C + A+
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 251 ELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGF 310
L +M G +PD FT+ LI L EA+ L+ +M GC ++VTY T+++G
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 311 CKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDK 370
CK I+ A + +ME I + V YNT+IDGLCK + ++DA L +M +G++PD
Sbjct: 234 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293
Query: 371 FTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRS 430
FTY+SL++ C G A+ ++ +M P++VT+ LI K G++ A KL
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 431 IQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGG 490
+ + I Y+ +I R EA +F M+ K P+ +TY + +G C
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK-AK 412
Query: 491 PIGEAVDFVIEMLERGFLPEFSSFYMLAEGL 521
+ E ++ EM +RG + ++ L G
Sbjct: 413 RVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 319 bits (817), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 178/511 (34%), Positives = 271/511 (53%), Gaps = 1/511 (0%)
Query: 3 LVETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLM 62
LV + M + GI ++ T++ILI C+ Q+ A+ ++ +M G PD T +L+
Sbjct: 99 LVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLL 158
Query: 63 QGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFN 122
G + A+ + QMVE G + T N L+HG + R +A++ + MV +G
Sbjct: 159 NGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQ 218
Query: 123 PDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEI 182
PD TY +VNGLCK G + AL ++ M Q +P V YN++I LC V +A+ +
Sbjct: 219 PDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNL 278
Query: 183 LNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 242
+M + PN +TYN+LI LC + +A+ L + + I P+V TF++LI
Sbjct: 279 FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 338
Query: 243 TSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVT 302
A +L+ EM + PD FTY+ LI+ C L+EA + + M S C NVVT
Sbjct: 339 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 398
Query: 303 YNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI 362
YNTLI GFCK KR++E E+F EM +G+ N+VTY TLI G ++R ++A + QM+
Sbjct: 399 YNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMV 458
Query: 363 MEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVE 422
+G+ PD TY+ LL C G ++ A + + + + EPDI TY +I G+CKAG+VE
Sbjct: 459 SDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVE 518
Query: 423 VASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVF 482
L S+ +KG+ Y ++ R+ EA LFREM E+ PD+ TY +
Sbjct: 519 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Query: 483 RGLCNGGGPIGEAVDFVIEMLERGFLPEFSS 513
R G A + + EM F+ + S+
Sbjct: 579 RAHLRDGDKAASA-ELIREMRSCRFVGDAST 608
Score = 305 bits (782), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 159/466 (34%), Positives = 254/466 (54%)
Query: 1 LKLVETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTT 60
L L A M+ G +PD+ T N L+ C ++I A+ ++ +M G PD TF T
Sbjct: 132 LSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNT 191
Query: 61 LMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEG 120
L+ GL A+ + ++MV GC VT ++V+G CK G I+ ALS +++M
Sbjct: 192 LIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGK 251
Query: 121 FNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAV 180
P YNT+++ LC +V AL + M +G P+V TYNSLI LC G +A
Sbjct: 252 IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 311
Query: 181 EILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 240
+L+ MI R +PN +T++ LI KE ++ EA +L + + I PD+ T++SLI G
Sbjct: 312 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 371
Query: 241 CLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNV 300
C+ D A +F+ M +K C P+ TYN LI C ++E ++L +EM G N
Sbjct: 372 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431
Query: 301 VTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQ 360
VTY TLI GF + + + A+ +F +M G+ + +TY+ L+DGLC + +VE A + +
Sbjct: 432 VTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEY 491
Query: 361 MIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGR 420
+ ++PD +TYN ++ C+AG ++ D+ +++ G +P++VTY T++ G C+ G
Sbjct: 492 LQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGL 551
Query: 421 VEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREM 466
E A L R ++ +G + YN +I+A R + L REM
Sbjct: 552 KEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 302 bits (773), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 173/527 (32%), Positives = 282/527 (53%), Gaps = 3/527 (0%)
Query: 9 ADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEE 68
DMV P + F+ L+ A+ K ++ I + E+M G++ + T++ L+
Sbjct: 70 GDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRR 129
Query: 69 GNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTY 128
L AL + +M++ G VT+N L++GFC RI DA+S + +MV G+ PD FT+
Sbjct: 130 SQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTF 189
Query: 129 NTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMIL 188
NTL++GL + +A+ ++D M+ +G PD+ TY +++GLCK G+++ A+ +L +M
Sbjct: 190 NTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQ 249
Query: 189 RDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDV 248
P + YNT+I LC V +A L + +KGI P+V T+NSLI+ LC +
Sbjct: 250 GKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 309
Query: 249 AMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLID 308
A L +M + P+ T++ LID+ G L EA KL EM ++ TY++LI+
Sbjct: 310 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 369
Query: 309 GFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKP 368
GFC R++EA+ +F+ M + N VTYNTLI G CK++RV++ +L +M GL
Sbjct: 370 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG 429
Query: 369 DKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLL 428
+ TY +L+ + +A + A + + M S+G PDI+TY L+ GLC G+VE A +
Sbjct: 430 NTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVF 489
Query: 429 RSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNG 488
+Q + YN +I+ + + + + LF + K P+ +TY + G C
Sbjct: 490 EYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 549
Query: 489 GGPIGEAVDFVI-EMLERGFLPEFSSFYMLAEGLVSLGKEETLVELI 534
G + E D + EM E G LP+ ++ L + G + ELI
Sbjct: 550 G--LKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELI 594
Score = 278 bits (710), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 149/459 (32%), Positives = 249/459 (54%), Gaps = 3/459 (0%)
Query: 71 LDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNT 130
LD A+ + MV+ + V + L+ K + + +S ++M + G + + +TY+
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 131 LVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRD 190
L+N C+ + AL V+ M++ G++PD+ T NSL++G C + +AV ++ QM+
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 191 CSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAM 250
P++ T+NTLI L + N+ EA L + KG PD+ T+ ++ GLC + D+A+
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 251 ELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGF 310
L ++M+ +P YN +ID+LC+ + +AL L EM++ G NVVTYN+LI
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 311 CKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDK 370
C R +A + +M + I+ N VT++ LID K ++ +A +L D+MI + PD
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 371 FTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRS 430
FTY+SL+ +C + A + + M S C P++VTY TLI G CKA RV+ +L R
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421
Query: 431 IQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGG 490
+ +G+V Y +I F+ + A +F++M+ PD +TY + GLCN G
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481
Query: 491 PIGEAVDFVIEMLERGFL-PEFSSFYMLAEGLVSLGKEE 528
E V E L+R + P+ ++ ++ EG+ GK E
Sbjct: 482 V--ETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVE 518
Score = 175 bits (443), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 189/382 (49%), Gaps = 3/382 (0%)
Query: 188 LRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFD 247
+RD S Y + + ++++A L + P + F+ L+ + + FD
Sbjct: 39 VRDFSGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFD 98
Query: 248 VAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLI 307
+ + L ++M+ G + +TY++LI+ C R L AL +L +M G ++VT N+L+
Sbjct: 99 LVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLL 158
Query: 308 DGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLK 367
+GFC RI +A + +M G +S T+NTLI GL + R +A L+D+M+++G +
Sbjct: 159 NGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQ 218
Query: 368 PDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKL 427
PD TY ++ C+ GDI A +++ M EP +V Y T+I LC V A L
Sbjct: 219 PDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNL 278
Query: 428 LRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCN 487
+ KGI YN +I+ L R ++A RL +M+E+ P+ +T+ +
Sbjct: 279 FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 338
Query: 488 GGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELIDMVMDKAKFSDRE 547
G + EA EM++R P+ ++ L G + + + ++++ K F +
Sbjct: 339 EGKLV-EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 397
Query: 548 T--SMVRGFLKIRKFQDALATF 567
T ++++GF K ++ + + F
Sbjct: 398 TYNTLIKGFCKAKRVDEGMELF 419
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 157/289 (54%), Gaps = 2/289 (0%)
Query: 2 KLVETA--HADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFT 59
KLVE + +M+ R I PD+ T++ LI C ++ A M E M P+ T+
Sbjct: 341 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 400
Query: 60 TLMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSE 119
TL++G + +D + + +M + G + VT L+HGF + ++A ++MVS+
Sbjct: 401 TLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSD 460
Query: 120 GFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEA 179
G PD TY+ L++GLC G V+ AL V + + + +PD++TYN +I G+CK G+VE+
Sbjct: 461 GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDG 520
Query: 180 VEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 239
++ + L+ PN +TY T++S C++ EEA L R + +G LPD T+N+LI+
Sbjct: 521 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA 580
Query: 240 LCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLL 288
+ + EL +EM++ D T ++ + L + + LK+L
Sbjct: 581 HLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLHDGRLDKSFLKML 629
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 317 bits (812), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 179/519 (34%), Positives = 277/519 (53%), Gaps = 1/519 (0%)
Query: 16 IKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGAL 75
I D+ ++NILI C+ Q+ A+ ++ +M G PD T ++L+ G + A+
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 170
Query: 76 RIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGL 135
+ +QM VT N L+HG + +A++ I MV+ G PD FTY T+VNGL
Sbjct: 171 ALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 230
Query: 136 CKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNT 195
CK G + AL ++ M + + DV Y ++I LC V +A+ + +M + PN
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 290
Query: 196 ITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQE 255
+TYN+LI LC + +A+ L + + I P+V TF++LI A +L+ E
Sbjct: 291 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350
Query: 256 MKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKR 315
M + PD FTY+ LI+ C L+EA + + M S C NVVTYNTLI GFCK KR
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 316 IEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNS 375
+EE E+F EM +G+ N+VTYNTLI GL ++ + A ++ +M+ +G+ PD TY+
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470
Query: 376 LLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKG 435
LL C+ G +++A + + + + EPDI TY +I G+CKAG+VE L S+ +KG
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530
Query: 436 IVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEA 495
+ Y +I R+ EA LFREM E P++ TY + R G A
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASA 590
Query: 496 VDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELI 534
+ + EM GF+ + S+ M+ L E++ +E++
Sbjct: 591 -ELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEML 628
Score = 293 bits (749), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 159/488 (32%), Positives = 254/488 (52%)
Query: 1 LKLVETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTT 60
L L M+ G +PD+ T + L+ C +I A+ ++++M P+ TF T
Sbjct: 131 LPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNT 190
Query: 61 LMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEG 120
L+ GL A+ + ++MV GC T +V+G CK G I+ ALS +++M
Sbjct: 191 LIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK 250
Query: 121 FNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAV 180
D Y T+++ LC +V AL + M +G P+V TYNSLI LC G +A
Sbjct: 251 IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 310
Query: 181 EILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 240
+L+ MI R +PN +T++ LI KE ++ EA +L + + I PD+ T++SLI G
Sbjct: 311 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370
Query: 241 CLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNV 300
C+ D A +F+ M +K C P+ TYN LI C +EE ++L +EM G N
Sbjct: 371 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 430
Query: 301 VTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQ 360
VTYNTLI G + + A++IF +M G+ + +TY+ L+DGLCK ++E A + +
Sbjct: 431 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEY 490
Query: 361 MIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGR 420
+ ++PD +TYN ++ C+AG ++ D+ +++ G +P+++ Y T+I G C+ G
Sbjct: 491 LQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGL 550
Query: 421 VEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKH 480
E A L R ++ G + YN +I+A R + L +EM DA T
Sbjct: 551 KEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISM 610
Query: 481 VFRGLCNG 488
V L +G
Sbjct: 611 VINMLHDG 618
Score = 286 bits (731), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 154/459 (33%), Positives = 255/459 (55%), Gaps = 3/459 (0%)
Query: 71 LDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNT 130
LD A+ + +MV+ L + V N L+ K + + +S + M + + D ++YN
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 131 LVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRD 190
L+N C+ + AL V+ M++ G++PD+ T +SL++G C + EAV +++QM + +
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 191 CSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAM 250
PNT+T+NTLI L N+ EA L + ++G PD+ T+ +++ GLC + D+A+
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 251 ELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGF 310
L ++M+ + D Y +ID+LC+ + +AL L EM++ G NVVTYN+LI
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 311 CKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDK 370
C R +A + +M + I+ N VT++ LID K ++ +A +L D+MI + PD
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 371 FTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRS 430
FTY+SL+ +C + A + + M S C P++VTY TLI G CKA RVE +L R
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420
Query: 431 IQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGG 490
+ +G+V YN +IQ LF+ A ++F++M+ PPD +TY + GLC G
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480
Query: 491 PIGEAVDFVIEMLERGFL-PEFSSFYMLAEGLVSLGKEE 528
E V E L++ + P+ ++ ++ EG+ GK E
Sbjct: 481 L--EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 517
Score = 285 bits (729), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 167/527 (31%), Positives = 275/527 (52%), Gaps = 3/527 (0%)
Query: 9 ADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEE 68
+MV P + FN L+ A+ K ++ I + E M ++ D ++ L+
Sbjct: 69 GEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRR 128
Query: 69 GNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTY 128
L AL + +M++ G VT++ L++G+C RI +A++ + +M + P+ T+
Sbjct: 129 SQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTF 188
Query: 129 NTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMIL 188
NTL++GL +A+ ++D M+ G PD+FTY ++++GLCK G+++ A+ +L +M
Sbjct: 189 NTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEK 248
Query: 189 RDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDV 248
+ + Y T+I LC V +A L + +KGI P+V T+NSLI+ LC +
Sbjct: 249 GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 308
Query: 249 AMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLID 308
A L +M + P+ T++ LID+ G L EA KL EM ++ TY++LI+
Sbjct: 309 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 368
Query: 309 GFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKP 368
GFC R++EA+ +F+ M + N VTYNTLI G CK++RVE+ +L +M GL
Sbjct: 369 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 428
Query: 369 DKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLL 428
+ TYN+L+ +AGD A I + M S+G PDI+TY L+ GLCK G++E A +
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 488
Query: 429 RSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNG 488
+Q + YN +I+ + + + + LF + K P+ + Y + G C
Sbjct: 489 EYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 548
Query: 489 GGPIGEAVDFVI-EMLERGFLPEFSSFYMLAEGLVSLGKEETLVELI 534
G + E D + EM E G LP ++ L + G + ELI
Sbjct: 549 G--LKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELI 593
Score = 172 bits (435), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 36/311 (11%)
Query: 9 ADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEE 68
+DM+ R I P+V TF+ LI A K ++ A + +EM + PD T+++L+ G
Sbjct: 314 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 373
Query: 69 GNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEM------------ 116
LD A + E M+ C VT N L+ GFCK R+E+ + +EM
Sbjct: 374 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 433
Query: 117 -----------------------VSEGFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQ 153
VS+G PD TY+ L++GLCK G +++AL V + + +
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 493
Query: 154 EGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEE 213
+PD++TYN +I G+CK G+VE+ ++ + L+ PN I Y T+IS C++ EE
Sbjct: 494 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 553
Query: 214 ATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLID 273
A L R + G LP+ T+N+LI+ + + EL +EM++ G D T +M+I+
Sbjct: 554 ADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613
Query: 274 SLCSRGMLEEA 284
L G LE++
Sbjct: 614 ML-HDGRLEKS 623
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 315 bits (808), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 182/507 (35%), Positives = 277/507 (54%), Gaps = 2/507 (0%)
Query: 9 ADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEE 68
DMV P + F+ L+ A+ K ++ I + E+M G++ + T++ +
Sbjct: 64 GDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRR 123
Query: 69 GNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTY 128
L AL I +M++ G + VT+N L++GFC RI +A++ + +MV G+ PD T+
Sbjct: 124 SQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTF 183
Query: 129 NTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMIL 188
TLV+GL + +A+ +++ M+ +G PD+ TY ++I+GLCK GE + A+ +LN+M
Sbjct: 184 TTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK 243
Query: 189 RDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDV 248
+ + YNT+I LCK +++A +L + +KGI PDV T+N LI LC +
Sbjct: 244 GKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSD 303
Query: 249 AMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEM-ESSGCARNVVTYNTLI 307
A L +M K PD +N LID+ G L EA KL EM +S C +VV YNTLI
Sbjct: 304 ASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLI 363
Query: 308 DGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLK 367
GFCK KR+EE E+F EM +G+ N+VTY TLI G ++R ++A + QM+ +G+
Sbjct: 364 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 423
Query: 368 PDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKL 427
PD TYN LL C G+++ A + + M + DIVTY T+I LCKAG+VE L
Sbjct: 424 PDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDL 483
Query: 428 LRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCN 487
S+ +KG+ Y ++ R+ EA LF EM E P++ TY + R
Sbjct: 484 FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLR 543
Query: 488 GGGPIGEAVDFVIEMLERGFLPEFSSF 514
G A + + EM GF + S+F
Sbjct: 544 DGDEAASA-ELIKEMRSCGFAGDASTF 569
Score = 280 bits (716), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 156/487 (32%), Positives = 252/487 (51%), Gaps = 1/487 (0%)
Query: 3 LVETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLM 62
LV + M + GI ++ T++I I C+ Q+ A+ ++ +M G P T +L+
Sbjct: 93 LVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLL 152
Query: 63 QGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFN 122
G + A+ + +QMVE G VT LVHG + + +A++ ++ MV +G
Sbjct: 153 NGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQ 212
Query: 123 PDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEI 182
PD TY ++NGLCK G AL +++ M + + DV YN++I GLCK +++A ++
Sbjct: 213 PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDL 272
Query: 183 LNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 242
N+M + P+ TYN LIS LC + +A+ L + K I PD+ FN+LI
Sbjct: 273 FNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVK 332
Query: 243 TSNFDVAMELFQEM-KTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVV 301
A +L+ EM K+K C PD YN LI C +EE +++ +EM G N V
Sbjct: 333 EGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 392
Query: 302 TYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 361
TY TLI GF + + + A+ +F +M G+ + +TYN L+DGLC + VE A + + M
Sbjct: 393 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYM 452
Query: 362 IMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRV 421
+K D TY +++ C+AG ++ D+ +++ G +P++VTY T++ G C+ G
Sbjct: 453 QKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLK 512
Query: 422 EVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHV 481
E A L ++ G + YN +I+A R + L +EM DA T+ V
Sbjct: 513 EEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLV 572
Query: 482 FRGLCNG 488
L +G
Sbjct: 573 TNMLHDG 579
Score = 245 bits (625), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 135/426 (31%), Positives = 221/426 (51%), Gaps = 4/426 (0%)
Query: 105 RIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYN 164
+++DA+ +MV P ++ L++ + K+ + + + M G +++TY+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 165 SLISGLCKLGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSK 224
I+ C+ ++ A+ IL +M+ P+ +T N+L++ C N++ EA L +
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 225 GILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEA 284
G PD TF +L+ GL + A+ L + M KGCQPD TY +I+ LC RG + A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 285 LKLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDG 344
L LL +ME +VV YNT+IDG CK K +++A ++F++ME +GI + TYN LI
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 345 LCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMT-SNGCEP 403
LC R DA++L+ M+ + + PD +N+L+ + + G + A + M S C P
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354
Query: 404 DIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLF 463
D+V Y TLI G CK RVE ++ R + +G+V Y +I F+ + A +F
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414
Query: 464 REMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIE-MLERGFLPEFSSFYMLAEGLV 522
++M+ PD +TY + GLCN G E V E M +R + ++ + E L
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNV--ETALVVFEYMQKRDMKLDIVTYTTMIEALC 472
Query: 523 SLGKEE 528
GK E
Sbjct: 473 KAGKVE 478
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 312 bits (800), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 165/478 (34%), Positives = 258/478 (53%)
Query: 11 MVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGN 70
M+ G P + T N L+ C ++I A+ ++++M G PD TFTTL+ GL +
Sbjct: 126 MMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNK 185
Query: 71 LDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNT 130
A+ + E+MV GC VT +++G CK G + AL+ + +M D Y+T
Sbjct: 186 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYST 245
Query: 131 LVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRD 190
+++ LCK HV AL + M +G PDVFTY+SLIS LC G +A +L+ M+ R
Sbjct: 246 VIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK 305
Query: 191 CSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAM 250
+PN +T+N+LI KE ++ EA +L + + I P++ T+NSLI G C+ D A
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQ 365
Query: 251 ELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGF 310
++F M +K C PD TYN LI+ C + + ++L ++M G N VTY TLI GF
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425
Query: 311 CKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDK 370
+ + A+ +F +M G+ N +TYNTL+DGLCK+ ++E A + + + ++PD
Sbjct: 426 FQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDI 485
Query: 371 FTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRS 430
+TYN + C+AG ++ D+ +++ G +PD++ Y T+I G CK G E A L
Sbjct: 486 YTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIK 545
Query: 431 IQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNG 488
++ G + YN +I+A R + L +EM DA TY V L +G
Sbjct: 546 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDG 603
Score = 307 bits (787), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 168/507 (33%), Positives = 273/507 (53%), Gaps = 1/507 (0%)
Query: 15 GIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGA 74
G+ ++ T+NI+I LC+ Q+ A+ ++ +M G P T +L+ G + A
Sbjct: 95 GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154
Query: 75 LRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNG 134
+ + +QMVE G VT LVHG + + +A++ ++ MV +G PD TY ++NG
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 214
Query: 135 LCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPN 194
LCK G AL +++ M + + DV Y+++I LCK V++A+ + +M + P+
Sbjct: 215 LCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPD 274
Query: 195 TITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQ 254
TY++LIS LC + +A+ L + + I P+V TFNSLI A +LF
Sbjct: 275 VFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 334
Query: 255 EMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLK 314
EM + P+ TYN LI+ C L+EA ++ M S C +VVTYNTLI+GFCK K
Sbjct: 335 EMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAK 394
Query: 315 RIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYN 374
++ + E+F +M +G+ N+VTY TLI G ++ ++A + QM+ +G+ P+ TYN
Sbjct: 395 KVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYN 454
Query: 375 SLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMK 434
+LL C+ G +++A + + + + EPDI TY + G+CKAG+VE L S+ +K
Sbjct: 455 TLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLK 514
Query: 435 GIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGE 494
G+ AYN +I ++ EA LF +M E PD+ TY + R G
Sbjct: 515 GVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAAS 574
Query: 495 AVDFVIEMLERGFLPEFSSFYMLAEGL 521
A + + EM F + S++ ++ + L
Sbjct: 575 A-ELIKEMRSCRFAGDASTYGLVTDML 600
Score = 299 bits (766), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 179/536 (33%), Positives = 285/536 (53%), Gaps = 3/536 (0%)
Query: 1 LKLVETA--HADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTF 58
LKL E +MV P + F+ L+ A+ K + I E+M G++ + T+
Sbjct: 44 LKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTY 103
Query: 59 TTLMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVS 118
++ L L AL I +M++ G + VT+N L++GFC RI +A++ + +MV
Sbjct: 104 NIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 163
Query: 119 EGFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEE 178
G+ PD T+ TLV+GL + +A+ +++ M+ +G PD+ TY ++I+GLCK GE +
Sbjct: 164 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 223
Query: 179 AVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ 238
A+ +LN+M + + Y+T+I +LCK V++A L + +KGI PDV T++SLI
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283
Query: 239 GLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCAR 298
LC + A L +M + P+ T+N LID+ G L EA KL EM
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343
Query: 299 NVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLM 358
N+VTYN+LI+GFC R++EA++IF M + + VTYNTLI+G CK+++V D +L
Sbjct: 344 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF 403
Query: 359 DQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKA 418
M GL + TY +L+ + +A D A + + M S+G P+I+TY TL+ GLCK
Sbjct: 404 RDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 463
Query: 419 GRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTY 478
G++E A + +Q + YN + + + + + + LF + K PD + Y
Sbjct: 464 GKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAY 523
Query: 479 KHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELI 534
+ G C G EA I+M E G LP+ ++ L + G + ELI
Sbjct: 524 NTMISGFCKKGLK-EEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELI 578
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 174/340 (51%)
Query: 10 DMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEG 69
+M ++GI+PDV T++ LI LC + A ++ +M + P+ TF +L+ +EG
Sbjct: 265 EMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEG 324
Query: 70 NLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYN 129
L A ++ ++M++ VT N L++GFC R+++A MVS+ PD TYN
Sbjct: 325 KLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYN 384
Query: 130 TLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILR 189
TL+NG CK V +E+ M + G + TY +LI G + + + A + QM+
Sbjct: 385 TLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSD 444
Query: 190 DCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVA 249
PN +TYNTL+ LCK ++E+A + L + PD+ T+N + +G+C +
Sbjct: 445 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDG 504
Query: 250 MELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDG 309
+LF + KG +PD YN +I C +G+ EEA L +M+ G + TYNTLI
Sbjct: 505 WDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
Query: 310 FCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSR 349
+ + E+ EM + ++ TY + D L R
Sbjct: 565 HLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGR 604
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/300 (34%), Positives = 157/300 (52%)
Query: 9 ADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEE 68
+DM+ R I P+V TFN LI A K ++ A + +EM + P+ T+ +L+ G
Sbjct: 299 SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 358
Query: 69 GNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTY 128
LD A +I MV CL VT N L++GFCK ++ D + ++M G + TY
Sbjct: 359 DRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTY 418
Query: 129 NTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMIL 188
TL++G + A V M+ +G P++ TYN+L+ GLCK G++E+A+ + +
Sbjct: 419 TTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQK 478
Query: 189 RDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDV 248
P+ TYN + +CK +VE+ +L L+ KG+ PDV +N++I G C +
Sbjct: 479 SKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEE 538
Query: 249 AMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLID 308
A LF +MK G PD TYN LI + G + +L+KEM S A + TY + D
Sbjct: 539 AYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 598
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 157/326 (48%), Gaps = 7/326 (2%)
Query: 246 FDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNT 305
D A++LF EM P ++ L+ ++ + + ++ME G + N+ TYN
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 306 LIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 365
+I+ C+ ++ A I +M G + VT N+L++G C R+ +A L+DQM+ G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 366 LKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVAS 425
+PD T+ +L+ + A +V+ M GC+PD+VTYG +I GLCK G ++A
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 426 KLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGL 485
LL ++ I Y+ VI +L + + +A+ LF EM K PD TY + L
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 486 CNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGK----EETLVELIDMVMDKA 541
CN G +A + +MLER P +F L + GK E+ E+I +D
Sbjct: 286 CN-YGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 542 KFSDRETSMVRGFLKIRKFQDALATF 567
+ S++ GF + +A F
Sbjct: 345 IVT--YNSLINGFCMHDRLDEAQQIF 368
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%)
Query: 16 IKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGAL 75
++PD+ T+NI+ + +CKA ++ + + G+ PD + T++ G ++G + A
Sbjct: 481 MEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAY 540
Query: 76 RIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGL 135
+ +M E G L + T N L+ ++G + I+EM S F D TY + + L
Sbjct: 541 TLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 600
Query: 136 CKVGHVKQALEVM 148
K LEV+
Sbjct: 601 HDGRLDKGFLEVL 613
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 310 bits (793), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 171/507 (33%), Positives = 274/507 (54%), Gaps = 1/507 (0%)
Query: 15 GIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGA 74
GI+ D+ T I+I C+ ++ A ++ G PD TF+TL+ G EG + A
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 159
Query: 75 LRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNG 134
+ + ++MVE VTV+ L++G C +GR+ +AL I MV GF PD+ TY ++N
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 219
Query: 135 LCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPN 194
LCK G+ AL++ M + V Y+ +I LCK G ++A+ + N+M ++ +
Sbjct: 220 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD 279
Query: 195 TITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQ 254
+TY++LI LC + + ++ ++ R + + I+PDV TF++LI A EL+
Sbjct: 280 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN 339
Query: 255 EMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLK 314
EM T+G PD TYN LID C L EA ++ M S GC ++VTY+ LI+ +CK K
Sbjct: 340 EMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAK 399
Query: 315 RIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYN 374
R+++ +F E+ +G+ N++TYNTL+ G C+S ++ A +L +M+ G+ P TY
Sbjct: 400 RVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYG 459
Query: 375 SLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMK 434
LL C G++ +A +I + M + I Y +I G+C A +V+ A L S+ K
Sbjct: 460 ILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK 519
Query: 435 GIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGE 494
G+ YN +I L ++ +EA LFR+M E PD TY + R G G I
Sbjct: 520 GVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLI-S 578
Query: 495 AVDFVIEMLERGFLPEFSSFYMLAEGL 521
+V+ + EM GF + S+ M+ + L
Sbjct: 579 SVELIEEMKVCGFSADSSTIKMVIDML 605
Score = 295 bits (756), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 171/518 (33%), Positives = 275/518 (53%), Gaps = 1/518 (0%)
Query: 18 PDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGALRI 77
P FN L A+ + Q + + M G+ D T T ++ + L A +
Sbjct: 68 PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSV 127
Query: 78 REQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCK 137
+ + G +T + LV+GFC EGR+ +A++ + MV PD T +TL+NGLC
Sbjct: 128 LGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCL 187
Query: 138 VGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTIT 197
G V +AL ++D M++ GF PD TY +++ LCK G A+++ +M R+ + +
Sbjct: 188 KGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ 247
Query: 198 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMK 257
Y+ +I +LCK+ ++A L + KGI DV T++SLI GLC +D ++ +EM
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 258 TKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIE 317
+ PD T++ LID G L EA +L EM + G A + +TYN+LIDGFCK +
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 318 EAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLL 377
EA ++FD M +G + VTY+ LI+ CK++RV+D +L ++ +GL P+ TYN+L+
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 378 TYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIV 437
+C++G + A ++ Q M S G P +VTYG L+ GLC G + A ++ +Q +
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487
Query: 438 LTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVD 497
L YN +I + + +A LF + +K PD +TY + GLC G + EA
Sbjct: 488 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS-LSEADM 546
Query: 498 FVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELID 535
+M E G P+ ++ +L + + VELI+
Sbjct: 547 LFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIE 584
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 112/340 (32%), Positives = 176/340 (51%)
Query: 10 DMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEG 69
+M +GIK DV T++ LI LC + M+ EM G + PD TF+ L+ ++EG
Sbjct: 270 EMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEG 329
Query: 70 NLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYN 129
L A + +M+ G +T N L+ GFCKE + +A MVS+G PD TY+
Sbjct: 330 KLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYS 389
Query: 130 TLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILR 189
L+N CK V + + + +G P+ TYN+L+ G C+ G++ A E+ +M+ R
Sbjct: 390 ILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR 449
Query: 190 DCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVA 249
P+ +TY L+ LC ++ +A E+ + + + +N +I G+C S D A
Sbjct: 450 GVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDA 509
Query: 250 MELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDG 309
LF + KG +PD TYN++I LC +G L EA L ++M+ GC + TYN LI
Sbjct: 510 WSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 569
Query: 310 FCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSR 349
+ + E+ +EM++ G S +S T +ID L R
Sbjct: 570 HLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRR 609
Score = 169 bits (427), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 149/289 (51%), Gaps = 2/289 (0%)
Query: 2 KLVETA--HADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFT 59
KL+E + +M++RGI PD T+N LI CK + + A M + M G PD T++
Sbjct: 330 KLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYS 389
Query: 60 TLMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSE 119
L+ + +D +R+ ++ G + +T N LV GFC+ G++ A QEMVS
Sbjct: 390 ILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR 449
Query: 120 GFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEA 179
G P TY L++GLC G + +ALE+ + M + + YN +I G+C +V++A
Sbjct: 450 GVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDA 509
Query: 180 VEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 239
+ + + P+ +TYN +I LCK+ + EA L R + G PD T+N LI+
Sbjct: 510 WSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 569
Query: 240 LCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLL 288
S ++EL +EMK G D T M+ID L R + + L +L
Sbjct: 570 HLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLDML 618
Score = 135 bits (340), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 154/321 (47%), Gaps = 3/321 (0%)
Query: 249 AMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLID 308
A++LF+ M P +N L ++ + L K ME +G ++ T +I+
Sbjct: 54 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMIN 113
Query: 309 GFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKP 368
+C+ K++ A + G +++T++TL++G C RV +A L+D+M+ +P
Sbjct: 114 CYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP 173
Query: 369 DKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLL 428
D T ++L+ C G + A ++ M G +PD VTYG ++ LCK+G +A L
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233
Query: 429 RSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNG 488
R ++ + I + Y+ VI +L + +A+ LF EM K D +TY + GLCN
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293
Query: 489 GGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELIDMVMDKAKFSDRET 548
G + + EM+ R +P+ +F L + V GK EL + ++ + D T
Sbjct: 294 G-KWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTIT 352
Query: 549 --SMVRGFLKIRKFQDALATF 567
S++ GF K +A F
Sbjct: 353 YNSLIDGFCKENCLHEANQMF 373
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 310 bits (793), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 171/503 (33%), Positives = 271/503 (53%), Gaps = 1/503 (0%)
Query: 11 MVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGN 70
M + GI + T++ILI C+ Q+ A+ ++ +M G P+ T ++L+ G
Sbjct: 107 MQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKR 166
Query: 71 LDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNT 130
+ A+ + +QM G VT N L+HG + +A++ I MV++G PD TY
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV 226
Query: 131 LVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRD 190
+VNGLCK G A +++ M Q +P V YN++I GLCK +++A+ + +M +
Sbjct: 227 VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 286
Query: 191 CSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAM 250
PN +TY++LIS LC + +A+ L + + I PDV TF++LI A
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 346
Query: 251 ELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGF 310
+L+ EM + P TY+ LI+ C L+EA ++ + M S C +VVTYNTLI GF
Sbjct: 347 KLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGF 406
Query: 311 CKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDK 370
CK KR+EE E+F EM +G+ N+VTYN LI GL ++ + A ++ +M+ +G+ P+
Sbjct: 407 CKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 466
Query: 371 FTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRS 430
TYN+LL C+ G +++A + + + + EP I TY +I G+CKAG+VE L +
Sbjct: 467 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN 526
Query: 431 IQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGG 490
+ +KG+ AYN +I R+ EA LF+EM E P++ Y + R G
Sbjct: 527 LSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD 586
Query: 491 PIGEAVDFVIEMLERGFLPEFSS 513
A + + EM GF + S+
Sbjct: 587 REASA-ELIKEMRSCGFAGDAST 608
Score = 305 bits (781), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 164/488 (33%), Positives = 258/488 (52%)
Query: 1 LKLVETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTT 60
L L M+ G +P++ T + L+ C + +I A+ ++++M G P+ TF T
Sbjct: 132 LPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNT 191
Query: 61 LMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEG 120
L+ GL A+ + ++MV GC VT V+V+G CK G + A + + +M
Sbjct: 192 LIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK 251
Query: 121 FNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAV 180
P YNT+++GLCK H+ AL + M +G P+V TY+SLIS LC G +A
Sbjct: 252 LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 311
Query: 181 EILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 240
+L+ MI R +P+ T++ LI KE ++ EA +L + + I P + T++SLI G
Sbjct: 312 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371
Query: 241 CLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNV 300
C+ D A ++F+ M +K C PD TYN LI C +EE +++ +EM G N
Sbjct: 372 CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 431
Query: 301 VTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQ 360
VTYN LI G + + A+EIF EM G+ N +TYNTL+DGLCK+ ++E A + +
Sbjct: 432 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 491
Query: 361 MIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGR 420
+ ++P +TYN ++ C+AG ++ D+ N++ G +PD+V Y T+I G C+ G
Sbjct: 492 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 551
Query: 421 VEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKH 480
E A L + ++ G + YN +I+A R + L +EM DA T
Sbjct: 552 KEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGL 611
Query: 481 VFRGLCNG 488
V L +G
Sbjct: 612 VTNMLHDG 619
Score = 303 bits (776), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 173/526 (32%), Positives = 280/526 (53%), Gaps = 1/526 (0%)
Query: 9 ADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEE 68
+MV P + F+ L+ A+ K ++ I + E+M G+ + T++ L+
Sbjct: 70 GEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRR 129
Query: 69 GNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTY 128
L AL + +M++ G VT++ L++G+C RI +A++ + +M G+ P+ T+
Sbjct: 130 SQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTF 189
Query: 129 NTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMIL 188
NTL++GL +A+ ++D M+ +G PD+ TY +++GLCK G+ + A +LN+M
Sbjct: 190 NTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQ 249
Query: 189 RDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDV 248
P + YNT+I LCK +++A L + + +KGI P+V T++SLI LC +
Sbjct: 250 GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSD 309
Query: 249 AMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLID 308
A L +M + PD FT++ LID+ G L EA KL EM ++VTY++LI+
Sbjct: 310 ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 369
Query: 309 GFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKP 368
GFC R++EA+++F+ M + + VTYNTLI G CK +RVE+ ++ +M GL
Sbjct: 370 GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 429
Query: 369 DKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLL 428
+ TYN L+ +AGD A +I + M S+G P+I+TY TL+ GLCK G++E A +
Sbjct: 430 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 489
Query: 429 RSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNG 488
+Q + T YN +I+ + + + + LF + K PD + Y + G C
Sbjct: 490 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRK 549
Query: 489 GGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELI 534
G EA EM E G LP + L + G E ELI
Sbjct: 550 GSK-EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELI 594
Score = 276 bits (707), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 160/515 (31%), Positives = 269/515 (52%), Gaps = 6/515 (1%)
Query: 66 IEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQ 125
+ E LD A+ + +MV+ + + + L+ K + + +S ++M + G +
Sbjct: 57 LSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNH 116
Query: 126 FTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQ 185
+TY+ L+N C+ + AL V+ M++ G++P++ T +SL++G C + EAV +++Q
Sbjct: 117 YTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 176
Query: 186 MILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSN 245
M + PNT+T+NTLI L N+ EA L + +KG PD+ T+ ++ GLC +
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 236
Query: 246 FDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNT 305
D+A L +M+ +P YN +ID LC +++AL L KEME+ G NVVTY++
Sbjct: 237 TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSS 296
Query: 306 LIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 365
LI C R +A + +M + I+ + T++ LID K ++ +A +L D+M+
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 356
Query: 366 LKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVAS 425
+ P TY+SL+ +C + A + + M S C PD+VTY TLI G CK RVE
Sbjct: 357 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 416
Query: 426 KLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGL 485
++ R + +G+V YN +IQ LF+ A +F+EM+ PP+ +TY + GL
Sbjct: 417 EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476
Query: 486 CNGGGPIGEAVDFVIEMLERGFL-PEFSSFYMLAEGLVSLGKEETLVELIDMVMDKAKFS 544
C G E V E L+R + P ++ ++ EG+ GK E +L + K
Sbjct: 477 CKNGKL--EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP 534
Query: 545 D--RETSMVRGFLKIRKFQDALATFGDIL-DSRMP 576
D +M+ GF + ++A A F ++ D +P
Sbjct: 535 DVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 569
Score = 166 bits (420), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 155/287 (54%), Gaps = 6/287 (2%)
Query: 2 KLVETA--HADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFT 59
KLVE + +MV R I P + T++ LI C ++ A M E M PD T+
Sbjct: 341 KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYN 400
Query: 60 TLMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSE 119
TL++G + ++ + + +M + G + VT N+L+ G + G + A +EMVS+
Sbjct: 401 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD 460
Query: 120 GFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEA 179
G P+ TYNTL++GLCK G +++A+ V + + + +P ++TYN +I G+CK G+VE+
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 520
Query: 180 VEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 239
++ + L+ P+ + YNT+IS C++ EEA L + + G LP+ +N+LI+
Sbjct: 521 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Query: 240 LCLTSNFDVAMELFQEMKTKGCQPDEFTY----NMLIDSLCSRGMLE 282
+ + + EL +EM++ G D T NML D + L+
Sbjct: 581 RLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLD 627
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 309 bits (792), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 179/567 (31%), Positives = 300/567 (52%), Gaps = 21/567 (3%)
Query: 1 LKLVETAHADMVSRGIKPDVSTFNILIKALCKAHQ-IRPAILMMEEMPGYGLAPDERTFT 59
L +V A A G P V ++N ++ A ++ + I A + +EM ++P+ T+
Sbjct: 154 LSIVHLAQA----HGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYN 209
Query: 60 TLMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSE 119
L++G GN+D AL + ++M GCL VT N L+ G+CK +I+D ++ M +
Sbjct: 210 ILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK 269
Query: 120 GFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEA 179
G P+ +YN ++NGLC+ G +K+ V+ M + G+ D TYN+LI G CK G +A
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 180 VEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 239
+ + +M+ +P+ ITY +LI ++CK + A E + +G+ P+ T+ +L+ G
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDG 389
Query: 240 LCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARN 299
+ A + +EM G P TYN LI+ C G +E+A+ +L++M+ G + +
Sbjct: 390 FSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD 449
Query: 300 VVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMD 359
VV+Y+T++ GFC+ ++EA + EM +GI +++TY++LI G C+ RR ++A L +
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYE 509
Query: 360 QMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAG 419
+M+ GL PD+FTY +L+ YC GD+++A + M G PD+VTY LI GL K
Sbjct: 510 EMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQS 569
Query: 420 RVEVASKLLRSIQMKGIVLTPQAYNPVIQ-----------ALFR----RKRTTEAMRLFR 464
R A +LL + + V + Y+ +I+ +L + + TEA ++F
Sbjct: 570 RTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFE 629
Query: 465 EMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSL 524
M+ K PD Y + G C G I +A EM++ GFL + L + L
Sbjct: 630 SMLGKNHKPDGTAYNIMIHGHCRAGD-IRKAYTLYKEMVKSGFLLHTVTVIALVKALHKE 688
Query: 525 GKEETLVELIDMVMDKAKFSDRETSMV 551
GK L +I V+ + S+ E + V
Sbjct: 689 GKVNELNSVIVHVLRSCELSEAEQAKV 715
Score = 264 bits (675), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 139/437 (31%), Positives = 232/437 (53%), Gaps = 2/437 (0%)
Query: 86 CLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCKVG-HVKQA 144
C T+ +++V + + I+ ALS + + GF P +YN +++ + ++ A
Sbjct: 130 CYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFA 189
Query: 145 LEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTITYNTLIST 204
V ML+ P+VFTYN LI G C G ++ A+ + ++M + C PN +TYNTLI
Sbjct: 190 ENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDG 249
Query: 205 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPD 264
CK ++++ +L R + KG+ P++ ++N +I GLC + EM +G D
Sbjct: 250 YCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLD 309
Query: 265 EFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFD 324
E TYN LI C G +AL + EM G +V+TY +LI CK + A E D
Sbjct: 310 EVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLD 369
Query: 325 EMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAG 384
+M ++G+ N TY TL+DG + + +A +++ +M G P TYN+L+ +C G
Sbjct: 370 QMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTG 429
Query: 385 DIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYN 444
++ A ++++M G PD+V+Y T++ G C++ V+ A ++ R + KGI Y+
Sbjct: 430 KMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYS 489
Query: 445 PVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLE 504
+IQ ++RT EA L+ EM+ PPD TY + C G + +A+ EM+E
Sbjct: 490 SLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGD-LEKALQLHNEMVE 548
Query: 505 RGFLPEFSSFYMLAEGL 521
+G LP+ ++ +L GL
Sbjct: 549 KGVLPDVVTYSVLINGL 565
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%)
Query: 11 MVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGN 70
M+ + KPD + +NI+I C+A IR A + +EM G T L++ L +EG
Sbjct: 631 MLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGK 690
Query: 71 LDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPD 124
++ + ++ L VLV +EG ++ L + EM +GF P+
Sbjct: 691 VNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
Score = 33.9 bits (76), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 57/147 (38%), Gaps = 4/147 (2%)
Query: 422 EVASKLLRSIQ--MKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYK 479
E AS + +S+Q T ++ V+++ R +A+ + P L+Y
Sbjct: 114 EYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYN 173
Query: 480 HVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELIDMVMD 539
V I A + EMLE P ++ +L G G + + L D +
Sbjct: 174 AVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMET 233
Query: 540 KAKFSDRET--SMVRGFLKIRKFQDAL 564
K + T +++ G+ K+RK D
Sbjct: 234 KGCLPNVVTYNTLIDGYCKLRKIDDGF 260
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 307 bits (787), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 175/509 (34%), Positives = 277/509 (54%), Gaps = 4/509 (0%)
Query: 9 ADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEE 68
DMV P + FN L+ A+ K ++ I + E+M G++ D T++ +
Sbjct: 72 GDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRR 131
Query: 69 GNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTY 128
L AL + +M++ G VT++ L++G+C RI DA++ + +MV G+ PD FT+
Sbjct: 132 SQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTF 191
Query: 129 NTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMIL 188
TL++GL +A+ ++D M+Q G PD+ TY ++++GLCK G+++ A+ +LN+M
Sbjct: 192 TTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEA 251
Query: 189 RDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDV 248
N + +NT+I +LCK VE A +L + +KGI P+V T+NSLI LC +
Sbjct: 252 ARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSD 311
Query: 249 AMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLID 308
A L M K P+ T+N LID+ G L EA KL +EM + +TYN LI+
Sbjct: 312 ASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLIN 371
Query: 309 GFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKP 368
GFC R++EA+++F M + N TYNTLI+G CK +RVED +L +M GL
Sbjct: 372 GFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVG 431
Query: 369 DKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLL 428
+ TY +++ + +AGD A + + M SN DI+TY L+ GLC G+++ A +
Sbjct: 432 NTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIF 491
Query: 429 RSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNG 488
+ +Q + L YN +I+ + + + EA LF + K PD +TY + GLC+
Sbjct: 492 KYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVTYNTMISGLCS- 547
Query: 489 GGPIGEAVDFVIEMLERGFLPEFSSFYML 517
+ EA D +M E G LP ++ L
Sbjct: 548 KRLLQEADDLFRKMKEDGTLPNSGTYNTL 576
Score = 300 bits (768), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 175/521 (33%), Positives = 272/521 (52%), Gaps = 4/521 (0%)
Query: 1 LKLVETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTT 60
+LV + M + GI D+ T++I I C+ Q+ A+ ++ +M G PD T ++
Sbjct: 99 FELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSS 158
Query: 61 LMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEG 120
L+ G + A+ + +QMVE G T L+HG + +A++ + +MV G
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 121 FNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAV 180
PD TY T+VNGLCK G + AL +++ M +V +N++I LCK VE AV
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAV 278
Query: 181 EILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 240
++ +M + PN +TYN+LI+ LC + +A+ L + K I P+V TFN+LI
Sbjct: 279 DLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAF 338
Query: 241 CLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNV 300
A +L +EM + PD TYN+LI+ C L+EA ++ K M S C N+
Sbjct: 339 FKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNI 398
Query: 301 VTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQ 360
TYNTLI+GFCK KR+E+ E+F EM +G+ N+VTY T+I G ++ + A + Q
Sbjct: 399 QTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQ 458
Query: 361 MIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGR 420
M+ + D TY+ LL C G + A I + + + E +I Y T+I G+CKAG+
Sbjct: 459 MVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGK 518
Query: 421 VEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKH 480
V A L S+ +K V+T YN +I L ++ EA LFR+M E P++ TY
Sbjct: 519 VGEAWDLFCSLSIKPDVVT---YNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNT 575
Query: 481 VFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGL 521
+ R A + + EM GF+ + S+ ++ L
Sbjct: 576 LIRANLRDCDRAASA-ELIKEMRSSGFVGDASTISLVTNML 615
Score = 283 bits (725), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 156/488 (31%), Positives = 260/488 (53%), Gaps = 3/488 (0%)
Query: 1 LKLVETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTT 60
L L A M+ G +PD+ T + L+ C + +I A+ ++++M G PD TFTT
Sbjct: 134 LSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTT 193
Query: 61 LMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEG 120
L+ GL A+ + +QMV+ GC VT +V+G CK G I+ AL+ + +M +
Sbjct: 194 LIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAAR 253
Query: 121 FNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAV 180
+ +NT+++ LCK HV+ A+++ M +G P+V TYNSLI+ LC G +A
Sbjct: 254 IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDAS 313
Query: 181 EILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 240
+L+ M+ + +PN +T+N LI KE ++ EA +L + + I PD T+N LI G
Sbjct: 314 RLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGF 373
Query: 241 CLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNV 300
C+ + D A ++F+ M +K C P+ TYN LI+ C +E+ ++L +EM G N
Sbjct: 374 CMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNT 433
Query: 301 VTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQ 360
VTY T+I GF + + A+ +F +M + + +TY+ L+ GLC +++ A +
Sbjct: 434 VTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKY 493
Query: 361 MIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGR 420
+ ++ + F YN+++ C+AG + A D+ +++ +PD+VTY T+I GLC
Sbjct: 494 LQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCSKRL 550
Query: 421 VEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKH 480
++ A L R ++ G + YN +I+A R + L +EM DA T
Sbjct: 551 LQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISL 610
Query: 481 VFRGLCNG 488
V L +G
Sbjct: 611 VTNMLHDG 618
Score = 259 bits (663), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 136/419 (32%), Positives = 223/419 (53%)
Query: 71 LDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNT 130
+D A+ + MV+ + V N L+ K + E +S ++M + G + D +TY+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 131 LVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRD 190
+N C+ + AL V+ M++ G++PD+ T +SL++G C + +AV +++QM+
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 191 CSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAM 250
P+T T+ TLI L N+ EA L + +G PD+ T+ +++ GLC + D+A+
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 251 ELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGF 310
L +M+ + + +N +IDSLC +E A+ L EME+ G NVVTYN+LI+
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 311 CKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDK 370
C R +A + M + I+ N VT+N LID K ++ +A +L ++MI + PD
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363
Query: 371 FTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRS 430
TYN L+ +C + A + + M S C P+I TY TLI G CK RVE +L R
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFRE 423
Query: 431 IQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGG 489
+ +G+V Y +IQ F+ A +F++M+ P D +TY + GLC+ G
Sbjct: 424 MSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYG 482
Score = 239 bits (611), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 228/426 (53%), Gaps = 3/426 (0%)
Query: 105 RIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYN 164
+++DA+ +MV P +N L++ + K+ + + + + M G D++TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 165 SLISGLCKLGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSK 224
I+ C+ ++ A+ +L +M+ P+ +T ++L++ C ++ +A L +
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 225 GILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEA 284
G PD TF +LI GL L + A+ L +M +GCQPD TY +++ LC RG ++ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 285 LKLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDG 344
L LL +ME++ NVV +NT+ID CK + +E A ++F EME +GI N VTYN+LI+
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 345 LCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPD 404
LC R DA++L+ M+ + + P+ T+N+L+ + + G + A + + M +PD
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 405 IVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFR 464
+TY LI G C R++ A ++ + + K + Q YN +I + KR + + LFR
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422
Query: 465 EMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLP-EFSSFYMLAEGLVS 523
EM ++ + +TY + +G G ++ V + + +P + ++ +L GL S
Sbjct: 423 EMSQRGLVGNTVTYTTIIQGFFQAGD--CDSAQMVFKQMVSNRVPTDIMTYSILLHGLCS 480
Query: 524 LGKEET 529
GK +T
Sbjct: 481 YGKLDT 486
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/452 (28%), Positives = 212/452 (46%), Gaps = 3/452 (0%)
Query: 131 LVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRD 190
L N L + V A+++ M++ P + +N L+S + K+ + E + + QM
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113
Query: 191 CSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAM 250
S + TY+ I+ C+ +Q+ A + + G PD+ T +SL+ G C + A+
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 251 ELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGF 310
L +M G +PD FT+ LI L EA+ L+ +M GC ++VTY T+++G
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 311 CKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDK 370
CK I+ A + ++ME I N V +NT+ID LCK R VE A L +M +G++P+
Sbjct: 234 CKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNV 293
Query: 371 FTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRS 430
TYNSL+ C G A+ ++ NM P++VT+ LI K G++ A KL
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEE 353
Query: 431 IQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGG 490
+ + I YN +I R EA ++F+ M+ K P+ TY + G C
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCK-CK 412
Query: 491 PIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELIDMVMDKAKFSDRETS- 549
+ + V+ EM +RG + ++ + +G G ++ + ++ +D T
Sbjct: 413 RVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYS 472
Query: 550 -MVRGFLKIRKFQDALATFGDILDSRMPRKTF 580
++ G K AL F + S M F
Sbjct: 473 ILLHGLCSYGKLDTALVIFKYLQKSEMELNIF 504
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 307 bits (786), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 167/475 (35%), Positives = 258/475 (54%)
Query: 3 LVETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLM 62
LV + M GI ++ T+NILI C+ QI A+ ++ +M G P T ++L+
Sbjct: 103 LVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 63 QGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFN 122
G + A+ + +QMVE G +T L+HG + +A++ + MV G
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222
Query: 123 PDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEI 182
P+ TY +VNGLCK G + A +++ M + +V Y+++I LCK ++A+ +
Sbjct: 223 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNL 282
Query: 183 LNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 242
+M + PN ITY++LIS LC + +A+ L + + I P+V TFN+LI
Sbjct: 283 FTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVK 342
Query: 243 TSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVT 302
A +L+ EM + PD FTY+ LI+ C L+EA + + M S C NVVT
Sbjct: 343 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 402
Query: 303 YNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI 362
YNTLI+GFCK KRI+E E+F EM +G+ N+VTY TLI G ++R ++A + QM+
Sbjct: 403 YNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 462
Query: 363 MEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVE 422
+G+ P+ TYN+LL C+ G +++A + + + + EP I TY +I G+CKAG+VE
Sbjct: 463 SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 522
Query: 423 VASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALT 477
L S+ +KG+ YN +I R+ EA LFR+M E PD+ T
Sbjct: 523 DGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 286 bits (733), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 161/501 (32%), Positives = 272/501 (54%), Gaps = 3/501 (0%)
Query: 11 MVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGN 70
MV P + FN L+ A+ K + I + E+M G++ + T+ L+
Sbjct: 76 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 135
Query: 71 LDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNT 130
+ AL + +M++ G + VT++ L++G+C RI DA++ + +MV G+ PD T+ T
Sbjct: 136 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 195
Query: 131 LVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRD 190
L++GL +A+ ++D M+Q G P++ TY +++GLCK G+++ A +LN+M
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 255
Query: 191 CSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAM 250
N + Y+T+I +LCK ++A L + +KG+ P+V T++SLI LC + A
Sbjct: 256 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDAS 315
Query: 251 ELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGF 310
L +M + P+ T+N LID+ G L EA KL EM ++ TY++LI+GF
Sbjct: 316 RLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375
Query: 311 CKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDK 370
C R++EA+ +F+ M + N VTYNTLI+G CK++R+++ +L +M GL +
Sbjct: 376 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNT 435
Query: 371 FTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRS 430
TY +L+ + +A D A + + M S+G P+I+TY TL+ GLCK G++E A +
Sbjct: 436 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 495
Query: 431 IQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGG 490
+Q + T YN +I+ + + + + LF + K PD + Y + G C G
Sbjct: 496 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKG- 554
Query: 491 PIGEAVDFVI-EMLERGFLPE 510
+ E D + +M E G LP+
Sbjct: 555 -LKEEADALFRKMREDGPLPD 574
Score = 263 bits (672), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 153/523 (29%), Positives = 266/523 (50%), Gaps = 5/523 (0%)
Query: 48 GYGLAPDERTFTTLMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIE 107
G + + +++ + LD A+ + MV+ L + N L+ K + +
Sbjct: 43 GRAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFD 102
Query: 108 DALSFIQEMVSEGFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLI 167
+S ++M G + + +TYN L+N C+ + AL ++ M++ G++P + T +SL+
Sbjct: 103 LVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 168 SGLCKLGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGIL 227
+G C + +AV +++QM+ P+TIT+ TLI L N+ EA L + +G
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222
Query: 228 PDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKL 287
P++ T+ ++ GLC + D+A L +M+ + + Y+ +IDSLC ++AL L
Sbjct: 223 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNL 282
Query: 288 LKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCK 347
EME+ G NV+TY++LI C +R +A + +M + I+ N VT+N LID K
Sbjct: 283 FTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVK 342
Query: 348 SRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVT 407
++ +A +L D+MI + PD FTY+SL+ +C + A + + M S C P++VT
Sbjct: 343 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 402
Query: 408 YGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMM 467
Y TLI G CKA R++ +L R + +G+V Y +I F+ + A +F++M+
Sbjct: 403 YNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 462
Query: 468 EKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFL-PEFSSFYMLAEGLVSLGK 526
P+ +TY + GLC G E V E L+R + P ++ ++ EG+ GK
Sbjct: 463 SDGVHPNIMTYNTLLDGLCKNGKL--EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 520
Query: 527 EETLVELIDMVMDKAKFSDR--ETSMVRGFLKIRKFQDALATF 567
E +L + K D +M+ GF + ++A A F
Sbjct: 521 VEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALF 563
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 103/245 (42%), Gaps = 5/245 (2%)
Query: 329 QGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKR 388
+ S S Y ++ S +++DA L M+ P F +N LL+ +
Sbjct: 44 RAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDL 103
Query: 389 AADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQ 448
+ + M G ++ TY LI C+ ++ +A LL + G + + ++
Sbjct: 104 VISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163
Query: 449 ALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFL 508
KR ++A+ L +M+E PD +T+ + GL EAV V M++RG
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF-LHNKASEAVALVDRMVQRGCQ 222
Query: 509 PEFSSFYMLAEGLVSLGKEETLVELIDMVMDKAKFSDR---ETSMVRGFLKIRKFQDALA 565
P ++ ++ GL G + L++ M+ AK ++++ K R DAL
Sbjct: 223 PNLVTYGVVVNGLCKRGDIDLAFNLLNK-MEAAKIEANVVIYSTVIDSLCKYRHEDDALN 281
Query: 566 TFGDI 570
F ++
Sbjct: 282 LFTEM 286
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 304 bits (778), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 168/504 (33%), Positives = 277/504 (54%), Gaps = 35/504 (6%)
Query: 11 MVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGN 70
M++ G+ +STFN L++ LCK ++ +++++ G+ P+ T+ +QGL + G
Sbjct: 207 MLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGE 266
Query: 71 LDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNT 130
LDGA+R+ ++E G +T N L++G CK + ++A ++ +MV+EG PD +TYNT
Sbjct: 267 LDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNT 326
Query: 131 LVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRD 190
L+ G CK G V+ A ++ + GF PD FTY SLI GLC GE A+ + N+ + +
Sbjct: 327 LIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKG 386
Query: 191 CSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAM 250
PN I YNTLI L + + EA +LA ++ KG++P+V TFN L+ GLC A
Sbjct: 387 IKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDAD 446
Query: 251 ELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGF 310
L + M +KG PD FT+N+LI ++ +E AL++L M +G +V TYN+L++G
Sbjct: 447 GLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGL 506
Query: 311 CKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDK 370
CK + E+ E + M +G + N T+N L++ LC+ R++++A L+++M + + PD
Sbjct: 507 CKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDA 566
Query: 371 FTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRS 430
T+ +L+ +C+ GD+ A + + M E A K+ S
Sbjct: 567 VTFGTLIDGFCKNGDLDGAYTLFRKM-------------------------EEAYKVSSS 601
Query: 431 IQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGG 490
TP YN +I A + T A +LF+EM+++ PD TY+ + G C G
Sbjct: 602 --------TP-TYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGN 652
Query: 491 PIGEAVDFVIEMLERGFLPEFSSF 514
+ F++EM+E GF+P ++
Sbjct: 653 -VNLGYKFLLEMMENGFIPSLTTL 675
Score = 273 bits (697), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 157/473 (33%), Positives = 247/473 (52%)
Query: 17 KPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGALR 76
+P V ++N ++ L + A + M G+ PD +FT M+ + ALR
Sbjct: 108 EPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALR 167
Query: 77 IREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGLC 136
+ M GC + V +V GF +E + +M++ G + T+N L+ LC
Sbjct: 168 LLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLC 227
Query: 137 KVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTI 196
K G VK+ +++D +++ G P++FTYN I GLC+ GE++ AV ++ +I + P+ I
Sbjct: 228 KKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVI 287
Query: 197 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEM 256
TYN LI LCK ++ +EA + ++G+ PD T+N+LI G C +A + +
Sbjct: 288 TYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDA 347
Query: 257 KTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRI 316
G PD+FTY LID LC G AL L E G NV+ YNTLI G I
Sbjct: 348 VFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMI 407
Query: 317 EEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSL 376
EA ++ +EM +G+ T+N L++GLCK V DA L+ MI +G PD FT+N L
Sbjct: 408 LEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNIL 467
Query: 377 LTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGI 436
+ Y ++ A +I+ M NG +PD+ TY +L+ GLCK + E + +++ KG
Sbjct: 468 IHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGC 527
Query: 437 VLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGG 489
+N ++++L R ++ EA+ L EM K+ PDA+T+ + G C G
Sbjct: 528 APNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNG 580
Score = 253 bits (646), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 158/482 (32%), Positives = 246/482 (51%), Gaps = 44/482 (9%)
Query: 11 MVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGN 70
++ +G KPDV T+N LI LCK + + A + + +M GL PD T+ TL+ G + G
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGM 336
Query: 71 LDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNT 130
+ A RI V +G + T L+ G C EG AL+ E + +G P+ YNT
Sbjct: 337 VQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNT 396
Query: 131 LVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRD 190
L+ GL G + +A ++ + M ++G P+V T+N L++GLCK+G V +A ++ MI +
Sbjct: 397 LIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG 456
Query: 191 CSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAM 250
P+ T+N LI + ++E A E+ V+ G+ PDV T+NSL+ GLC TS F+ M
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVM 516
Query: 251 ELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGF 310
E ++ M KGC P+ FT+N+L++SLC L+EAL LL+EM++ + VT+ TLIDGF
Sbjct: 517 ETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGF 576
Query: 311 CK----------LKRIEEA--------------------------EEIFDEMEIQGISRN 334
CK +++EEA E++F EM + + +
Sbjct: 577 CKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPD 636
Query: 335 SVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQ 394
TY ++DG CK+ V + + +M+ G P T ++ C + AA I+
Sbjct: 637 GYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIH 696
Query: 395 NMTSNGCEPDIVTYGTLIGGLCKAGRVEVAS-KLLRSIQMKGIVLTPQAYNPVIQALFRR 453
M G P+ V +C + EVA+ KL+ +K +T AY + L R
Sbjct: 697 RMVQKGLVPEAVN------TICDVDKKEVAAPKLVLEDLLKKSCITYYAYELLFDGL-RD 749
Query: 454 KR 455
KR
Sbjct: 750 KR 751
Score = 232 bits (591), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 127/373 (34%), Positives = 204/373 (54%), Gaps = 7/373 (1%)
Query: 1 LKLVETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTT 60
++L E D V G PD T+ LI LC + A+ + E G G+ P+ + T
Sbjct: 337 VQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNT 396
Query: 61 LMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEG 120
L++GL +G + A ++ +M E G + T N+LV+G CK G + DA ++ M+S+G
Sbjct: 397 LIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG 456
Query: 121 FNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAV 180
+ PD FT+N L++G ++ ALE++D+ML G DPDV+TYNSL++GLCK + E+ +
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVM 516
Query: 181 EILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 240
E M+ + C+PN T+N L+ +LC+ +++EA L + +K + PD TF +LI G
Sbjct: 517 ETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGF 576
Query: 241 CLTSNFDVAMELFQEM----KTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGC 296
C + D A LF++M K P TYN++I + + + A KL +EM
Sbjct: 577 CKNGDLDGAYTLFRKMEEAYKVSSSTP---TYNIIIHAFTEKLNVTMAEKLFQEMVDRCL 633
Query: 297 ARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQ 356
+ TY ++DGFCK + + EM G + T +I+ LC RV +AA
Sbjct: 634 GPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAG 693
Query: 357 LMDQMIMEGLKPD 369
++ +M+ +GL P+
Sbjct: 694 IIHRMVQKGLVPE 706
Score = 223 bits (568), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 151/558 (27%), Positives = 257/558 (46%), Gaps = 8/558 (1%)
Query: 15 GIKPDVSTFNILIKALC---KAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNL 71
G K +ST+ +I+ L K + ++ M E G + E + M+ +G +
Sbjct: 35 GFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHML--EGVYVGAMKNYGRKGKV 92
Query: 72 DGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTL 131
A+ + E+M + C T + N ++ G + A M G PD +++
Sbjct: 93 QEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIR 152
Query: 132 VNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDC 191
+ CK AL +++ M +G + +V Y +++ G + E E+ +M+
Sbjct: 153 MKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGV 212
Query: 192 SPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAME 251
S T+N L+ LCK+ V+E +L + +G+LP++ T+N IQGLC D A+
Sbjct: 213 SLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVR 272
Query: 252 LFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFC 311
+ + +G +PD TYN LI LC +EA L +M + G + TYNTLI G+C
Sbjct: 273 MVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYC 332
Query: 312 KLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKF 371
K ++ AE I + G + TY +LIDGLC A L ++ + +G+KP+
Sbjct: 333 KGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVI 392
Query: 372 TYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSI 431
YN+L+ G I AA + M+ G P++ T+ L+ GLCK G V A L++ +
Sbjct: 393 LYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM 452
Query: 432 QMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGP 491
KG +N +I + + A+ + M++ PD TY + GLC
Sbjct: 453 ISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCK-TSK 511
Query: 492 IGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELIDMVMDKAKFSDRET--S 549
+ ++ M+E+G P +F +L E L K + + L++ + +K+ D T +
Sbjct: 512 FEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGT 571
Query: 550 MVRGFLKIRKFQDALATF 567
++ GF K A F
Sbjct: 572 LIDGFCKNGDLDGAYTLF 589
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 143/504 (28%), Positives = 232/504 (46%), Gaps = 75/504 (14%)
Query: 143 QALEVMDMMLQE-GFDPDVFTYNSLISGL------------------------------- 170
+ALE+ + M +E GF + TY S+I L
Sbjct: 22 KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVG 81
Query: 171 -----CKLGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKG 225
+ G+V+EAV + +M DC P +YN ++S L ++A ++ + +G
Sbjct: 82 AMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRG 141
Query: 226 ILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEF------------------- 266
I PDV +F ++ C TS A+ L M ++GC+ +
Sbjct: 142 ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGY 201
Query: 267 ----------------TYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGF 310
T+N L+ LC +G ++E KLL ++ G N+ TYN I G
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261
Query: 311 CKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDK 370
C+ ++ A + + QG + +TYN LI GLCK+ + ++A + +M+ EGL+PD
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321
Query: 371 FTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRS 430
+TYN+L+ YC+ G ++ A IV + NG PD TY +LI GLC G A L
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE 381
Query: 431 IQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGG 490
KGI YN +I+ L + EA +L EM EK P+ T+ + GLC G
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCK-MG 440
Query: 491 PIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELIDMVMDKAKFSDRET-- 548
+ +A V M+ +G+ P+ +F +L G + K E +E++D+++D D T
Sbjct: 441 CVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYN 500
Query: 549 SMVRGFLKIRKFQDALATFGDILD 572
S++ G K KF+D + T+ +++
Sbjct: 501 SLLNGLCKTSKFEDVMETYKTMVE 524
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 115/213 (53%), Gaps = 7/213 (3%)
Query: 4 VETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQ 63
V + MV +G P++ TFNIL+++LC+ ++ A+ ++EEM + PD TF TL+
Sbjct: 515 VMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLID 574
Query: 64 GLIEEGNLDGALRIREQMVE-HGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFN 122
G + G+LDGA + +M E + + T N+++H F ++ + A QEMV
Sbjct: 575 GFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLG 634
Query: 123 PDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEI 182
PD +TY +V+G CK G+V + + M++ GF P + T +I+ LC V EA I
Sbjct: 635 PDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGI 694
Query: 183 LNQMILRDCSPNTITYNTLISTLCKENQVEEAT 215
+++M+ + P ++T+C ++ E A
Sbjct: 695 IHRMVQKGLVPEA------VNTICDVDKKEVAA 721
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 304 bits (778), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 167/507 (32%), Positives = 270/507 (53%), Gaps = 1/507 (0%)
Query: 15 GIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGA 74
GI ++ T+NILI C+ QI A+ ++ +M G P T ++L+ G + A
Sbjct: 40 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 99
Query: 75 LRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNG 134
+ + +QMVE G +T L+HG + +A++ + MV G P+ TY +VNG
Sbjct: 100 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 159
Query: 135 LCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPN 194
LCK G + A +++ M + DV +N++I LCK V++A+ + +M + PN
Sbjct: 160 LCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 219
Query: 195 TITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQ 254
+TY++LIS LC + +A++L + K I P++ TFN+LI F A +L
Sbjct: 220 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHD 279
Query: 255 EMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLK 314
+M + PD FTYN LI+ C L++A ++ + M S C ++ TYNTLI GFCK K
Sbjct: 280 DMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSK 339
Query: 315 RIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYN 374
R+E+ E+F EM +G+ ++VTY TLI GL ++A ++ QM+ +G+ PD TY+
Sbjct: 340 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYS 399
Query: 375 SLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMK 434
LL C G +++A ++ M + + DI Y T+I G+CKAG+V+ L S+ +K
Sbjct: 400 ILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 459
Query: 435 GIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGE 494
G+ YN +I L ++ EA L ++M E PD+ TY + R G
Sbjct: 460 GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAAS 519
Query: 495 AVDFVIEMLERGFLPEFSSFYMLAEGL 521
A + + EM F+ + S+ ++A L
Sbjct: 520 A-ELIREMRSCRFVGDASTIGLVANML 545
Score = 296 bits (758), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 154/456 (33%), Positives = 249/456 (54%)
Query: 11 MVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGN 70
M+ G +P + T + L+ C +I A+ ++++M G PD TFTTL+ GL
Sbjct: 71 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 130
Query: 71 LDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNT 130
A+ + ++MV+ GC VT V+V+G CK G I+ A + + +M + D +NT
Sbjct: 131 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNT 190
Query: 131 LVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRD 190
+++ LCK HV AL + M +G P+V TY+SLIS LC G +A ++L+ MI +
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 250
Query: 191 CSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAM 250
+PN +T+N LI KE + EA +L + + I PD+ T+NSLI G C+ D A
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAK 310
Query: 251 ELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGF 310
++F+ M +K C PD TYN LI C +E+ +L +EM G + VTY TLI G
Sbjct: 311 QMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 370
Query: 311 CKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDK 370
+ A+++F +M G+ + +TY+ L+DGLC + ++E A ++ D M +K D
Sbjct: 371 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 430
Query: 371 FTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRS 430
+ Y +++ C+AG + D+ +++ G +P++VTY T+I GLC ++ A LL+
Sbjct: 431 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 490
Query: 431 IQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREM 466
++ G + YN +I+A R + L REM
Sbjct: 491 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 295 bits (754), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 168/524 (32%), Positives = 280/524 (53%), Gaps = 1/524 (0%)
Query: 11 MVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGN 70
MV P + FN L+ A+ K + I + E+M G++ + T+ L+
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 71 LDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNT 130
+ AL + +M++ G + VT++ L++G+C RI DA++ + +MV G+ PD T+ T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 131 LVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRD 190
L++GL +A+ ++D M+Q G P++ TY +++GLCK G+++ A +LN+M
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 191 CSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAM 250
+ + +NT+I +LCK V++A L + + +KGI P+V T++SLI LC + A
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 251 ELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGF 310
+L +M K P+ T+N LID+ G EA KL +M ++ TYN+LI+GF
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 311 CKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDK 370
C R+++A+++F+ M + + TYNTLI G CKS+RVED +L +M GL D
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360
Query: 371 FTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRS 430
TY +L+ GD A + + M S+G PDI+TY L+ GLC G++E A ++
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 420
Query: 431 IQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGG 490
+Q I L Y +I+ + + + + LF + K P+ +TY + GLC+
Sbjct: 421 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS-KR 479
Query: 491 PIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELI 534
+ EA + +M E G LP+ ++ L + G + ELI
Sbjct: 480 LLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELI 523
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 96/236 (40%), Gaps = 40/236 (16%)
Query: 338 YNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMT 397
+N L+ + K ++ + L ++M G+ + +TYN L+ +CR I A ++ M
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 398 SNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTT 457
G EP IVT +L+ G C KR +
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHG-----------------------------------KRIS 97
Query: 458 EAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYML 517
+A+ L +M+E PD +T+ + GL EAV V M++RG P ++ ++
Sbjct: 98 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA-SEAVALVDRMVQRGCQPNLVTYGVV 156
Query: 518 AEGLVSLGKEETLVELIDMVMDKAKFSDRE---TSMVRGFLKIRKFQDALATFGDI 570
GL G + L++ M+ AK +++ K R DAL F ++
Sbjct: 157 VNGLCKRGDIDLAFNLLNK-MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 211
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
Query: 403 PDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRL 462
P I + L+ + K + ++ L +Q GI YN +I RR + + A+ L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 463 FREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLV 522
+MM+ P +T + G C+G I +AV V +M+E G+ P+ +F L GL
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGK-RISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 523 SLGKEETLVELIDMVMDKA 541
K V L+D ++ +
Sbjct: 127 LHNKASEAVALVDRMVQRG 145
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 303 bits (777), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 162/530 (30%), Positives = 283/530 (53%), Gaps = 2/530 (0%)
Query: 19 DVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEE-GNLDGALRI 77
D F++ + L +R A + E+M YGL + + L ++ A+ +
Sbjct: 174 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 233
Query: 78 REQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCK 137
+ E G + N+++H C+ GRI++A + M +G+ PD +Y+T+VNG C+
Sbjct: 234 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 293
Query: 138 VGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTIT 197
G + + +++++M ++G P+ + Y S+I LC++ ++ EA E ++MI + P+T+
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 353
Query: 198 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMK 257
Y TLI CK + A++ + S+ I PDV T+ ++I G C + A +LF EM
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 258 TKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIE 317
KG +PD T+ LI+ C G +++A ++ M +GC+ NVVTY TLIDG CK ++
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 318 EAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLL 377
A E+ EM G+ N TYN++++GLCKS +E+A +L+ + GL D TY +L+
Sbjct: 474 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 533
Query: 378 TYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIV 437
YC++G++ +A +I++ M G +P IVT+ L+ G C G +E KLL + KGI
Sbjct: 534 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 593
Query: 438 LTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVD 497
+N +++ R A ++++M + PD TY+++ +G C + EA
Sbjct: 594 PNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN-MKEAWF 652
Query: 498 FVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELIDMVMDKAKFSDRE 547
EM +GF S++ +L +G + K E+ D + + +D+E
Sbjct: 653 LFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKE 702
Score = 298 bits (764), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 162/506 (32%), Positives = 279/506 (55%), Gaps = 11/506 (2%)
Query: 5 ETAHADMVSR-----GIKPDVSTFNILIKALCKAHQIRPA--ILMMEEMPGYGLAPDERT 57
+TA A +V R G+ +V+++NI+I +C+ +I+ A +L++ E+ GY PD +
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGY--TPDVIS 283
Query: 58 FTTLMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMV 117
++T++ G G LD ++ E M G + ++ C+ ++ +A EM+
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 343
Query: 118 SEGFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVE 177
+G PD Y TL++G CK G ++ A + M PDV TY ++ISG C++G++
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 178 EAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 237
EA ++ ++M + P+++T+ LI+ CK +++A + + G P+V T+ +LI
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Query: 238 QGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCA 297
GLC + D A EL EM G QP+ FTYN +++ LC G +EEA+KL+ E E++G
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 523
Query: 298 RNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQL 357
+ VTY TL+D +CK +++A+EI EM +G+ VT+N L++G C +ED +L
Sbjct: 524 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583
Query: 358 MDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCK 417
++ M+ +G+ P+ T+NSL+ YC ++K A I ++M S G PD TY L+ G CK
Sbjct: 584 LNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCK 643
Query: 418 AGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALT 477
A ++ A L + ++ KG ++ Y+ +I+ +RK+ EA +F +M + D
Sbjct: 644 ARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEI 703
Query: 478 YKHVFRGLCNGGGP--IGEAVDFVIE 501
+ G P I + +D +IE
Sbjct: 704 FDFFSDTKYKGKRPDTIVDPIDEIIE 729
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%)
Query: 1 LKLVETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTT 60
LK + DM SRG+ PD T+ L+K CKA ++ A + +EM G G + T++
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 671
Query: 61 LMQGLIEEGNLDGALRIREQMVEHG 85
L++G ++ A + +QM G
Sbjct: 672 LIKGFLKRKKFLEAREVFDQMRREG 696
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 303 bits (777), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 168/508 (33%), Positives = 273/508 (53%), Gaps = 1/508 (0%)
Query: 14 RGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDG 73
+GI ++ T +I+I C+ ++ A M ++ G PD TF+TL+ GL EG +
Sbjct: 101 KGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSE 160
Query: 74 ALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVN 133
AL + ++MVE G T +T+N LV+G C G++ DA+ I MV GF P++ TY ++
Sbjct: 161 ALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLK 220
Query: 134 GLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSP 193
+CK G A+E++ M + D Y+ +I GLCK G ++ A + N+M ++
Sbjct: 221 VMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 280
Query: 194 NTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELF 253
+ I Y TLI C + ++ +L R + + I PDV F++LI A EL
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELH 340
Query: 254 QEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKL 313
+EM +G PD TY LID C L++A +L M S GC N+ T+N LI+G+CK
Sbjct: 341 KEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Query: 314 KRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTY 373
I++ E+F +M ++G+ ++VTYNTLI G C+ ++E A +L +M+ ++PD +Y
Sbjct: 401 NLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSY 460
Query: 374 NSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQM 433
LL C G+ ++A +I + + + E DI Y +I G+C A +V+ A L S+ +
Sbjct: 461 KILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 520
Query: 434 KGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIG 493
KG+ + YN +I L ++ +EA LFR+M E P+ TY + R G G
Sbjct: 521 KGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHL-GEGDAT 579
Query: 494 EAVDFVIEMLERGFLPEFSSFYMLAEGL 521
++ + E+ GF + S+ M+ + L
Sbjct: 580 KSAKLIEEIKRCGFSVDASTVKMVVDML 607
Score = 270 bits (690), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 158/521 (30%), Positives = 261/521 (50%), Gaps = 1/521 (0%)
Query: 17 KPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGALR 76
+P + F+ L + + Q + + ++M G+A + T + ++ L A
Sbjct: 69 RPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFS 128
Query: 77 IREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGLC 136
++++ G VT + L++G C EGR+ +AL + MV G P T N LVNGLC
Sbjct: 129 AMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLC 188
Query: 137 KVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTI 196
G V A+ ++D M++ GF P+ TY ++ +CK G+ A+E+L +M R + +
Sbjct: 189 LNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAV 248
Query: 197 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEM 256
Y+ +I LCK+ ++ A L + KG D+ + +LI+G C +D +L ++M
Sbjct: 249 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM 308
Query: 257 KTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRI 316
+ PD ++ LID G L EA +L KEM G + + VTY +LIDGFCK ++
Sbjct: 309 IKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL 368
Query: 317 EEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSL 376
++A + D M +G N T+N LI+G CK+ ++D +L +M + G+ D TYN+L
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428
Query: 377 LTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGI 436
+ +C G ++ A ++ Q M S PDIV+Y L+ GLC G E A ++ I+ +
Sbjct: 429 IQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488
Query: 437 VLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAV 496
L YN +I + + +A LF + K PD TY + GLC G + EA
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCK-KGSLSEAD 547
Query: 497 DFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELIDMV 537
+M E G P ++ +L + G +LI+ +
Sbjct: 548 LLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI 588
Score = 264 bits (674), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/487 (30%), Positives = 258/487 (52%), Gaps = 1/487 (0%)
Query: 39 AILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVH 98
A+ + +EM P F+ L + D L + +QM G T++++++
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 99 GFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDP 158
C+ ++ A S + +++ G+ PD T++TL+NGLC G V +ALE++D M++ G P
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 159 DVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELA 218
+ T N+L++GLC G+V +AV ++++M+ PN +TY ++ +CK Q A EL
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235
Query: 219 RVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSR 278
R + + I D ++ +I GLC + D A LF EM+ KG + D Y LI C
Sbjct: 236 RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA 295
Query: 279 GMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTY 338
G ++ KLL++M +VV ++ LID F K ++ EAEE+ EM +GIS ++VTY
Sbjct: 296 GRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355
Query: 339 NTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTS 398
+LIDG CK +++ A ++D M+ +G P+ T+N L+ YC+A I ++ + M+
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 415
Query: 399 NGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTE 458
G D VTY TLI G C+ G++EVA +L + + + + +Y ++ L +
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 475
Query: 459 AMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLA 518
A+ +F ++ + D Y + G+CN + +A D + +G P+ ++ ++
Sbjct: 476 ALEIFEKIEKSKMELDIGIYNIIIHGMCN-ASKVDDAWDLFCSLPLKGVKPDVKTYNIMI 534
Query: 519 EGLVSLG 525
GL G
Sbjct: 535 GGLCKKG 541
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 132/464 (28%), Positives = 233/464 (50%), Gaps = 5/464 (1%)
Query: 107 EDALSFIQEMVSEGFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSL 166
+DA+ QEM P ++ L + + + L++ M +G +++T + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 167 ISGLCKLGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGI 226
I+ C+ ++ A + ++I P+T+T++TLI+ LC E +V EA EL + G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 227 LPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALK 286
P + T N+L+ GLCL A+ L M G QP+E TY ++ +C G A++
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 287 LLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLC 346
LL++ME + V Y+ +IDG CK ++ A +F+EMEI+G + + Y TLI G C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 347 KSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIV 406
+ R +D A+L+ MI + PD +++L+ + + G ++ A ++ + M G PD V
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 407 TYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREM 466
TY +LI G CK +++ A+ +L + KG + +N +I + + + LFR+M
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Query: 467 MEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGK 526
+ D +TY + +G C G + A + EM+ R P+ S+ +L +GL G+
Sbjct: 414 SLRGVVADTVTYNTLIQGFCE-LGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGE 472
Query: 527 EETLVELIDMVMDKAKFS---DRETSMVRGFLKIRKFQDALATF 567
E +E+ + + +K+K ++ G K DA F
Sbjct: 473 PEKALEIFEKI-EKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 515
Score = 199 bits (506), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 108/340 (31%), Positives = 178/340 (52%)
Query: 10 DMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEG 69
+M +G K D+ + LI+ C A + ++ +M + PD F+ L+ ++EG
Sbjct: 272 EMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEG 331
Query: 70 NLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYN 129
L A + ++M++ G VT L+ GFCKE +++ A + MVS+G P+ T+N
Sbjct: 332 KLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFN 391
Query: 130 TLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILR 189
L+NG CK + LE+ M G D TYN+LI G C+LG++E A E+ +M+ R
Sbjct: 392 ILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR 451
Query: 190 DCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVA 249
P+ ++Y L+ LC + E+A E+ + + D+ +N +I G+C S D A
Sbjct: 452 RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 511
Query: 250 MELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDG 309
+LF + KG +PD TYN++I LC +G L EA L ++ME G + N TYN LI
Sbjct: 512 WDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA 571
Query: 310 FCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSR 349
++ ++ +E++ G S ++ T ++D L R
Sbjct: 572 HLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGR 611
Score = 172 bits (437), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 152/285 (53%), Gaps = 1/285 (0%)
Query: 1 LKLVETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTT 60
L+ E H +M+ RGI PD T+ LI CK +Q+ A M++ M G P+ RTF
Sbjct: 333 LREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNI 392
Query: 61 LMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEG 120
L+ G + +D L + +M G + VT N L+ GFC+ G++E A QEMVS
Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR 452
Query: 121 FNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAV 180
PD +Y L++GLC G ++ALE+ + + + + D+ YN +I G+C +V++A
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 512
Query: 181 EILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 240
++ + L+ P+ TYN +I LCK+ + EA L R + G P+ CT+N LI+
Sbjct: 513 DLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAH 572
Query: 241 CLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEAL 285
+ + +L +E+K G D T M++D L S G L+++
Sbjct: 573 LGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML-SDGRLKKSF 616
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 106/260 (40%), Gaps = 46/260 (17%)
Query: 317 EEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSL 376
++A ++F EM + ++ L + ++++ + L QM ++G+ + +T + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 377 LTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGI 436
+ CR + A + + G EPD VT+ TLI GLC GRV
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRV--------------- 158
Query: 437 VLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAV 496
+EA+ L M+E P +T + GLC G + +AV
Sbjct: 159 --------------------SEALELVDRMVEMGHKPTLITLNALVNGLCL-NGKVSDAV 197
Query: 497 DFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELI------DMVMDKAKFSDRETSM 550
+ M+E GF P ++ + + + G+ +EL+ + +D K+S +
Sbjct: 198 LLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS----II 253
Query: 551 VRGFLKIRKFQDALATFGDI 570
+ G K +A F ++
Sbjct: 254 IDGLCKDGSLDNAFNLFNEM 273
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 303 bits (776), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 166/500 (33%), Positives = 268/500 (53%), Gaps = 1/500 (0%)
Query: 22 TFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGALRIREQM 81
T+NILI C+ QI A+ ++ +M G P T ++L+ G + A+ + +QM
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 82 VEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCKVGHV 141
VE G +T L+HG + +A++ + MV G P+ TY +VNGLCK G
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 142 KQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTITYNTL 201
AL +++ M + DV +N++I LCK V++A+ + +M + PN +TY++L
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 202 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGC 261
IS LC + +A++L + K I P++ TFN+LI F A +L+ +M +
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361
Query: 262 QPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEE 321
PD FTYN L++ C L++A ++ + M S C +VVTYNTLI GFCK KR+E+ E
Sbjct: 362 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 421
Query: 322 IFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYC 381
+F EM +G+ ++VTY TLI GL ++A ++ QM+ +G+ PD TY+ LL C
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481
Query: 382 RAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQ 441
G +++A ++ M + + DI Y T+I G+CKAG+V+ L S+ +KG+
Sbjct: 482 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 541
Query: 442 AYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIE 501
YN +I L ++ EA L ++M E P++ TY + R G A + + E
Sbjct: 542 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASA-ELIRE 600
Query: 502 MLERGFLPEFSSFYMLAEGL 521
M F+ + S+ ++A L
Sbjct: 601 MRSCRFVGDASTIGLVANML 620
Score = 296 bits (759), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 153/456 (33%), Positives = 249/456 (54%)
Query: 11 MVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGN 70
M+ G +P + T + L+ C +I A+ ++++M G PD TFTTL+ GL
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 71 LDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNT 130
A+ + ++MV+ GC VT V+V+G CK G + AL+ + +M + D +NT
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 265
Query: 131 LVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRD 190
+++ LCK HV AL + M +G P+V TY+SLIS LC G +A ++L+ MI +
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325
Query: 191 CSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAM 250
+PN +T+N LI KE + EA +L + + I PD+ T+NSL+ G C+ D A
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 385
Query: 251 ELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGF 310
++F+ M +K C PD TYN LI C +E+ +L +EM G + VTY TLI G
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445
Query: 311 CKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDK 370
+ A+++F +M G+ + +TY+ L+DGLC + ++E A ++ D M +K D
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 505
Query: 371 FTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRS 430
+ Y +++ C+AG + D+ +++ G +P++VTY T+I GLC ++ A LL+
Sbjct: 506 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 565
Query: 431 IQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREM 466
++ G + YN +I+A R + L REM
Sbjct: 566 MKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 292 bits (747), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 167/524 (31%), Positives = 277/524 (52%), Gaps = 1/524 (0%)
Query: 11 MVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGN 70
MV P + FN L+ A+ K + I + E+M + T+ L+
Sbjct: 76 MVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQ 135
Query: 71 LDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNT 130
+ AL + +M++ G + VT++ L++G+C RI DA++ + +MV G+ PD T+ T
Sbjct: 136 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 195
Query: 131 LVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRD 190
L++GL +A+ ++D M+Q G P++ TY +++GLCK G+ + A+ +LN+M
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAK 255
Query: 191 CSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAM 250
+ + +NT+I +LCK V++A L + + +KGI P+V T++SLI LC + A
Sbjct: 256 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 315
Query: 251 ELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGF 310
+L +M K P+ T+N LID+ G EA KL +M ++ TYN+L++GF
Sbjct: 316 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 375
Query: 311 CKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDK 370
C R+++A+++F+ M + + VTYNTLI G CKS+RVED +L +M GL D
Sbjct: 376 CMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 435
Query: 371 FTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRS 430
TY +L+ GD A + + M S+G PDI+TY L+ GLC G++E A ++
Sbjct: 436 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 495
Query: 431 IQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGG 490
+Q I L Y +I+ + + + + LF + K P+ +TY + GLC+
Sbjct: 496 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS-KR 554
Query: 491 PIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELI 534
+ EA + +M E G LP ++ L + G + ELI
Sbjct: 555 LLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELI 598
Score = 246 bits (628), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 148/498 (29%), Positives = 245/498 (49%), Gaps = 38/498 (7%)
Query: 105 RIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYN 164
+++DA+ MV P +N L++ + K+ + + + M + ++TYN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 165 SLISGLCKLGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSK 224
LI+ C+ ++ A+ +L +M+ P+ +T ++L++ C ++ +A L +
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 225 GILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEA 284
G PD TF +LI GL L + A+ L M +GCQP+ TY ++++ LC RG + A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 285 LKLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDG 344
L LL +ME++ +VV +NT+ID CK + +++A +F EME +GI N VTY++LI
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 345 LCKSRRVEDAAQLM-----------------------------------DQMIMEGLKPD 369
LC R DA+QL+ D MI + PD
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Query: 370 KFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLR 429
FTYNSL+ +C + +A + + M S C PD+VTY TLI G CK+ RVE ++L R
Sbjct: 365 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR 424
Query: 430 SIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGG 489
+ +G+V Y +IQ LF A ++F++M+ PPD +TY + GLCN
Sbjct: 425 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN-N 483
Query: 490 GPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELIDMVMDKAKFSDRET- 548
G + +A++ M + + + + EG+ GK + +L + K + T
Sbjct: 484 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 543
Query: 549 -SMVRGFLKIRKFQDALA 565
+M+ G R Q+A A
Sbjct: 544 NTMISGLCSKRLLQEAYA 561
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 165/318 (51%)
Query: 10 DMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEG 69
+M ++GI+P+V T++ LI LC + A ++ +M + P+ TF L+ ++EG
Sbjct: 285 EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 344
Query: 70 NLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYN 129
A ++ + M++ T N LV+GFC R++ A + MVS+ PD TYN
Sbjct: 345 KFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYN 404
Query: 130 TLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILR 189
TL+ G CK V+ E+ M G D TY +LI GL G+ + A ++ QM+
Sbjct: 405 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 464
Query: 190 DCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVA 249
P+ +TY+ L+ LC ++E+A E+ + I D+ + ++I+G+C D
Sbjct: 465 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 524
Query: 250 MELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDG 309
+LF + KG +P+ TYN +I LCS+ +L+EA LLK+M+ G N TYNTLI
Sbjct: 525 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584
Query: 310 FCKLKRIEEAEEIFDEME 327
+ + E+ EM
Sbjct: 585 HLRDGDKAASAELIREMR 602
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 151/285 (52%)
Query: 9 ADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEE 68
+DM+ + I P++ TFN LI A K + A + ++M + PD T+ +L+ G
Sbjct: 319 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378
Query: 69 GNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTY 128
LD A ++ E MV C VT N L+ GFCK R+ED +EM G D TY
Sbjct: 379 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 438
Query: 129 NTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMIL 188
TL+ GL G A +V M+ +G PD+ TY+ L+ GLC G++E+A+E+ + M
Sbjct: 439 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 498
Query: 189 RDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDV 248
+ + Y T+I +CK +V++ +L L+ KG+ P+V T+N++I GLC
Sbjct: 499 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 558
Query: 249 AMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMES 293
A L ++MK G P+ TYN LI + G + +L++EM S
Sbjct: 559 AYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603
Score = 166 bits (420), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 189/381 (49%), Gaps = 3/381 (0%)
Query: 189 RDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDV 248
R S + Y ++ + ++++A L + LP + FN L+ + FDV
Sbjct: 44 RAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDV 103
Query: 249 AMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLID 308
+ L ++M+ +TYN+LI+ C R + AL LL +M G ++VT ++L++
Sbjct: 104 VISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163
Query: 309 GFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKP 368
G+C KRI +A + D+M G +++T+ TLI GL + +A L+D+M+ G +P
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 223
Query: 369 DKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLL 428
+ TY ++ C+ GD A +++ M + E D+V + T+I LCK V+ A L
Sbjct: 224 NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 283
Query: 429 RSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNG 488
+ ++ KGI Y+ +I L R ++A +L +M+EK P+ +T+ +
Sbjct: 284 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 343
Query: 489 GGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELIDMVMDKAKFSDRET 548
G + EA +M++R P+ ++ L G + + ++ + ++ K F D T
Sbjct: 344 GKFV-EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT 402
Query: 549 --SMVRGFLKIRKFQDALATF 567
++++GF K ++ +D F
Sbjct: 403 YNTLIKGFCKSKRVEDGTELF 423
Score = 162 bits (411), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 139/254 (54%)
Query: 5 ETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQG 64
E + DM+ R I PD+ T+N L+ C ++ A M E M PD T+ TL++G
Sbjct: 350 EKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKG 409
Query: 65 LIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPD 124
+ ++ + +M G + VT L+ G +G ++A ++MVS+G PD
Sbjct: 410 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 469
Query: 125 QFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILN 184
TY+ L++GLC G +++ALEV D M + D++ Y ++I G+CK G+V++ ++
Sbjct: 470 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 529
Query: 185 QMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTS 244
+ L+ PN +TYNT+IS LC + ++EA L + + G LP+ T+N+LI+
Sbjct: 530 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 589
Query: 245 NFDVAMELFQEMKT 258
+ + EL +EM++
Sbjct: 590 DKAASAELIREMRS 603
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 302 bits (774), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 175/560 (31%), Positives = 277/560 (49%), Gaps = 37/560 (6%)
Query: 11 MVSRGIKPDVSTFNILIKALCKAHQIRPAI---LMMEEMPGYGLAPDERTFTTLMQGLIE 67
M G P+V ++NIL+K LC ++ + A+ MM + G G PD ++TT++ G +
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 208
Query: 68 EGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFT 127
EG+ D A +M++ G L VT N ++ CK ++ A+ + MV G PD T
Sbjct: 209 EGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 268
Query: 128 YNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMI 187
YN++++G C G K+A+ + M +G +PDV TY+ L+ LCK G EA +I + M
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMT 328
Query: 188 LRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFD 247
R P TY TL+ + + E L ++ GI PD F+ LI D
Sbjct: 329 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVD 388
Query: 248 VAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLI 307
AM +F +M+ +G P+ TY +I LC G +E+A+ ++M G + + YN+LI
Sbjct: 389 QAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLI 448
Query: 308 DGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLK 367
G C + E AEE+ EM +GI N++ +N++ID CK RV ++ +L + M+ G+K
Sbjct: 449 HGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVK 508
Query: 368 PDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKL 427
P+ TYN+L+ YC AG + A ++ M S G +P+ VTY TLI G CK R+E A L
Sbjct: 509 PNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVL 568
Query: 428 LRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCN 487
+ ++ G+ YN ++Q LF+ +RT A L+ + E + TY + GLC
Sbjct: 569 FKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCK 628
Query: 488 GG----------------------------------GPIGEAVDFVIEMLERGFLPEFSS 513
G EA D + G +P + +
Sbjct: 629 NKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWT 688
Query: 514 FYMLAEGLVSLGKEETLVEL 533
+ ++AE ++ G E L +L
Sbjct: 689 YRLMAENIIGQGLLEELDQL 708
Score = 271 bits (692), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 152/474 (32%), Positives = 253/474 (53%)
Query: 6 TAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGL 65
+ + +M+ RGI PDV T+N +I ALCKA + A+ ++ M G+ PD T+ +++ G
Sbjct: 217 STYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGY 276
Query: 66 IEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQ 125
G A+ ++M G VT ++L+ CK GR +A M G P+
Sbjct: 277 CSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEI 336
Query: 126 FTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQ 185
TY TL+ G G + + ++D+M++ G PD + ++ LI K G+V++A+ + ++
Sbjct: 337 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSK 396
Query: 186 MILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSN 245
M + +PN +TY +I LCK +VE+A + +G+ P +NSLI GLC +
Sbjct: 397 MRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 456
Query: 246 FDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNT 305
++ A EL EM +G + +N +IDS C G + E+ KL + M G NV+TYNT
Sbjct: 457 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNT 516
Query: 306 LIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 365
LI+G+C +++EA ++ M G+ N+VTY+TLI+G CK R+EDA L +M G
Sbjct: 517 LINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 576
Query: 366 LKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVAS 425
+ PD TYN +L + A ++ +T +G + ++ TY ++ GLCK + A
Sbjct: 577 VSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL 636
Query: 426 KLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYK 479
++ +++ + + L + +N +I AL + R EA LF P+ TY+
Sbjct: 637 QMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYR 690
Score = 270 bits (689), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 170/573 (29%), Positives = 281/573 (49%), Gaps = 9/573 (1%)
Query: 16 IKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGAL 75
+ PD+ T+ ILI C+A ++ + + G D FT L++GL + A+
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142
Query: 76 RI-REQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSE---GFNPDQFTYNTL 131
I +M E GC+ + N+L+ G C E R ++AL + M + G PD +Y T+
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202
Query: 132 VNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDC 191
+NG K G +A ML G PDV TYNS+I+ LCK +++A+E+LN M+
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262
Query: 192 SPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAME 251
P+ +TYN+++ C Q +EA + + S G+ PDV T++ L+ LC A +
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK 322
Query: 252 LFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFC 311
+F M +G +P+ TY L+ ++G L E LL M +G + ++ LI +
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 382
Query: 312 KLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKF 371
K ++++A +F +M QG++ N+VTY +I LCKS RVEDA +QMI EGL P
Sbjct: 383 KQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 442
Query: 372 TYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSI 431
YNSL+ C +RA +++ M G + + + ++I CK GRV + KL +
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELM 502
Query: 432 QMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGP 491
G+ YN +I + EAM+L M+ P+ +TY + G C
Sbjct: 503 VRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCK-ISR 561
Query: 492 IGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELIDMVMDKAKFSDRETS-- 549
+ +A+ EM G P+ ++ ++ +GL + EL + + + T
Sbjct: 562 MEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 621
Query: 550 MVRGFLKIRKFQDALATFGD--ILDSRMPRKTF 580
++ G K + DAL F + ++D ++ +TF
Sbjct: 622 ILHGLCKNKLTDDALQMFQNLCLMDLKLEARTF 654
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 116/441 (26%), Positives = 201/441 (45%), Gaps = 77/441 (17%)
Query: 177 EEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKG--ILPDVCT-- 232
E+A + ++++ R + N ++ + +++ + R+ + + PD+CT
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYG 91
Query: 233 ---------------------------------FNSLIQGLCLTSNFDVAMEL-FQEMKT 258
F L++GLC AM++ + M
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151
Query: 259 KGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEM---ESSGCARNVVTYNTLIDGFCKLKR 315
GC P+ F+YN+L+ LC +EAL+LL M G +VV+Y T+I+GF K
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211
Query: 316 IEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNS 375
++A + EM +GI + VTYN++I LCK++ ++ A ++++ M+ G+ PD TYNS
Sbjct: 212 SDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNS 271
Query: 376 LLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKG 435
+L YC +G K A ++ M S+G EPD+VTY L+ LCK GR A K+ S+ +G
Sbjct: 272 ILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRG 331
Query: 436 IVLTPQAYNPVIQ-----------------------------------ALFRRKRTTEAM 460
+ Y ++Q A ++ + +AM
Sbjct: 332 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAM 391
Query: 461 RLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEG 520
+F +M ++ P+A+TY V LC G + +A+ + +M++ G P + L G
Sbjct: 392 LVFSKMRQQGLNPNAVTYGAVIGILCK-SGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 450
Query: 521 LVSLGKEETLVELIDMVMDKA 541
L + K E ELI ++D+
Sbjct: 451 LCTCNKWERAEELILEMLDRG 471
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 173/379 (45%), Gaps = 35/379 (9%)
Query: 9 ADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLI-- 66
+ M +G+ P+ T+ +I LCK+ ++ A+L E+M GL+P + +L+ GL
Sbjct: 395 SKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTC 454
Query: 67 ---------------------------------EEGNLDGALRIREQMVEHGCLVTNVTV 93
+EG + + ++ E MV G +T
Sbjct: 455 NKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITY 514
Query: 94 NVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQ 153
N L++G+C G++++A+ + MVS G P+ TY+TL+NG CK+ ++ AL + M
Sbjct: 515 NTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMES 574
Query: 154 EGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEE 213
G PD+ TYN ++ GL + A E+ ++ TYN ++ LCK ++
Sbjct: 575 SGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDD 634
Query: 214 ATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLID 273
A ++ + L + + TFN +I L D A +LF + G P+ +TY ++ +
Sbjct: 635 ALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAE 694
Query: 274 SLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISR 333
++ +G+LEE +L ME +GC + N ++ + I A ++ + S
Sbjct: 695 NIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSL 754
Query: 334 NSVTYNTLIDGLCKSRRVE 352
+ T + ID L + E
Sbjct: 755 EASTASLFIDLLSGGKYQE 773
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 110/258 (42%), Gaps = 46/258 (17%)
Query: 352 EDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQN-MTSNGCE---PDIVT 407
EDA + D+++ G + N L R D AA N M G + PD+ T
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVAR--DSPAAAVSRYNRMARAGADEVTPDLCT 89
Query: 408 YGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRL-FREM 466
YG LIG C+AGR+++ L ++ KG + A+ P+++ L KRT++AM + R M
Sbjct: 90 YGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRM 149
Query: 467 MEKADPPDALTYKHVFRGLCN------------------GGGPIGEAVDFVI-------- 500
E P+ +Y + +GLC+ GGG + V +
Sbjct: 150 TELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKE 209
Query: 501 -----------EMLERGFLPEFSSFYMLAEGLVSLGKEETLVELIDMVMDKAKFSDRET- 548
EML+RG LP+ ++ + L + +E+++ ++ D T
Sbjct: 210 GDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 269
Query: 549 -SMVRGFLKIRKFQDALA 565
S++ G+ + ++A+
Sbjct: 270 NSILHGYCSSGQPKEAIG 287
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 301 bits (772), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 168/508 (33%), Positives = 274/508 (53%), Gaps = 1/508 (0%)
Query: 14 RGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDG 73
+GI ++ T +I+I C+ ++ A M ++ G P+ TF+TL+ GL EG +
Sbjct: 117 KGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSE 176
Query: 74 ALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVN 133
AL + ++MVE G +T+N LV+G C G+ +A+ I +MV G P+ TY ++N
Sbjct: 177 ALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLN 236
Query: 134 GLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSP 193
+CK G A+E++ M + D Y+ +I GLCK G ++ A + N+M ++ +
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITT 296
Query: 194 NTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELF 253
N ITYN LI C + ++ +L R + + I P+V TF+ LI A EL
Sbjct: 297 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELH 356
Query: 254 QEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKL 313
+EM +G PD TY LID C L++A +++ M S GC N+ T+N LI+G+CK
Sbjct: 357 KEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKA 416
Query: 314 KRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTY 373
RI++ E+F +M ++G+ ++VTYNTLI G C+ ++ A +L +M+ + P+ TY
Sbjct: 417 NRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTY 476
Query: 374 NSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQM 433
LL C G+ ++A +I + + + E DI Y +I G+C A +V+ A L S+ +
Sbjct: 477 KILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 536
Query: 434 KGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIG 493
KG+ + YN +I L ++ +EA LFR+M E PD TY + R G G
Sbjct: 537 KGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHL-GDGDAT 595
Query: 494 EAVDFVIEMLERGFLPEFSSFYMLAEGL 521
++V + E+ GF + S+ M+ + L
Sbjct: 596 KSVKLIEELKRCGFSVDASTIKMVIDML 623
Score = 287 bits (734), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 167/526 (31%), Positives = 271/526 (51%), Gaps = 1/526 (0%)
Query: 10 DMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEG 69
DM+ P V F+ L A+ K Q + + ++M G+A + T + ++
Sbjct: 78 DMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCR 137
Query: 70 NLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYN 129
L A ++++ G +T + L++G C EGR+ +AL + MV G PD T N
Sbjct: 138 KLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITIN 197
Query: 130 TLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILR 189
TLVNGLC G +A+ ++D M++ G P+ TY +++ +CK G+ A+E+L +M R
Sbjct: 198 TLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER 257
Query: 190 DCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVA 249
+ + + Y+ +I LCK ++ A L + KGI ++ T+N LI G C +D
Sbjct: 258 NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDG 317
Query: 250 MELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDG 309
+L ++M + P+ T+++LIDS G L EA +L KEM G A + +TY +LIDG
Sbjct: 318 AKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDG 377
Query: 310 FCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPD 369
FCK +++A ++ D M +G N T+N LI+G CK+ R++D +L +M + G+ D
Sbjct: 378 FCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVAD 437
Query: 370 KFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLR 429
TYN+L+ +C G + A ++ Q M S P+IVTY L+ GLC G E A ++
Sbjct: 438 TVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFE 497
Query: 430 SIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGG 489
I+ + L YN +I + + +A LF + K P TY + GLC
Sbjct: 498 KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCK-K 556
Query: 490 GPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELID 535
GP+ EA +M E G P+ ++ +L + G V+LI+
Sbjct: 557 GPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIE 602
Score = 287 bits (734), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 157/488 (32%), Positives = 260/488 (53%)
Query: 1 LKLVETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTT 60
L L +A ++ G +P+ TF+ LI LC ++ A+ +++ M G PD T T
Sbjct: 139 LCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINT 198
Query: 61 LMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEG 120
L+ GL G A+ + ++MVE+GC VT +++ CK G+ A+ +++M
Sbjct: 199 LVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN 258
Query: 121 FNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAV 180
D Y+ +++GLCK G + A + + M +G ++ TYN LI G C G ++
Sbjct: 259 IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGA 318
Query: 181 EILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 240
++L MI R +PN +T++ LI + KE ++ EA EL + + +GI PD T+ SLI G
Sbjct: 319 KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 378
Query: 241 CLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNV 300
C ++ D A ++ M +KGC P+ T+N+LI+ C +++ L+L ++M G +
Sbjct: 379 CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT 438
Query: 301 VTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQ 360
VTYNTLI GFC+L ++ A+E+F EM + + N VTY L+DGLC + E A ++ ++
Sbjct: 439 VTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK 498
Query: 361 MIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGR 420
+ ++ D YN ++ C A + A D+ ++ G +P + TY +IGGLCK G
Sbjct: 499 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGP 558
Query: 421 VEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKH 480
+ A L R ++ G YN +I+A T++++L E+ DA T K
Sbjct: 559 LSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKM 618
Query: 481 VFRGLCNG 488
V L +G
Sbjct: 619 VIDMLSDG 626
Score = 260 bits (664), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 132/418 (31%), Positives = 229/418 (54%)
Query: 72 DGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTL 131
D A+ + M+ L T + + L K + + L+ ++M +G + +T + +
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 132 VNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDC 191
+N C+ + A M +++ G++P+ T+++LI+GLC G V EA+E++++M+
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 192 SPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAME 251
P+ IT NTL++ LC + EA L + G P+ T+ ++ +C + +AME
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 252 LFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFC 311
L ++M+ + + D Y+++ID LC G L+ A L EME G N++TYN LI GFC
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309
Query: 312 KLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKF 371
R ++ ++ +M + I+ N VT++ LID K ++ +A +L +MI G+ PD
Sbjct: 310 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 369
Query: 372 TYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSI 431
TY SL+ +C+ + +A +V M S GC+P+I T+ LI G CKA R++ +L R +
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 429
Query: 432 QMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGG 489
++G+V YN +IQ + A LF+EM+ + PP+ +TYK + GLC+ G
Sbjct: 430 SLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 487
Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 135/466 (28%), Positives = 241/466 (51%), Gaps = 5/466 (1%)
Query: 105 RIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYN 164
+ +DA+ ++M+ P ++ L + + K L + M +G +++T +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 165 SLISGLCKLGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSK 224
+I+ C+ ++ A + ++I PNTIT++TLI+ LC E +V EA EL +
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 225 GILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEA 284
G PD+ T N+L+ GLCL+ AM L +M GCQP+ TY +++ +C G A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 285 LKLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDG 344
++LL++ME + V Y+ +IDG CK ++ A +F+EME++GI+ N +TYN LI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 345 LCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPD 404
C + R +D A+L+ MI + P+ T++ L+ + + G ++ A ++ + M G PD
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367
Query: 405 IVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFR 464
+TY +LI G CK ++ A++++ + KG + +N +I + R + + LFR
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427
Query: 465 EMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSL 524
+M + D +TY + +G C G + A + EM+ R P ++ +L +GL
Sbjct: 428 KMSLRGVVADTVTYNTLIQGFCELG-KLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486
Query: 525 GKEETLVELIDMVMDKAKFS---DRETSMVRGFLKIRKFQDALATF 567
G+ E +E+ + + +K+K ++ G K DA F
Sbjct: 487 GESEKALEIFEKI-EKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 531
Score = 165 bits (418), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 149/285 (52%), Gaps = 1/285 (0%)
Query: 1 LKLVETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTT 60
L+ E H +M+ RGI PD T+ LI CK + + A M++ M G P+ RTF
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 408
Query: 61 LMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEG 120
L+ G + +D L + +M G + VT N L+ GFC+ G++ A QEMVS
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468
Query: 121 FNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAV 180
P+ TY L++GLC G ++ALE+ + + + + D+ YN +I G+C +V++A
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 528
Query: 181 EILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 240
++ + L+ P TYN +I LCK+ + EA L R + G PD T+N LI+
Sbjct: 529 DLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAH 588
Query: 241 CLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEAL 285
+ +++L +E+K G D T M+ID L S G L+++
Sbjct: 589 LGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML-SDGRLKKSF 632
Score = 162 bits (410), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 186/378 (49%), Gaps = 3/378 (0%)
Query: 192 SPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAME 251
S ++Y + + + + ++A +L R + LP V F+ L + T +D+ +
Sbjct: 50 SDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLA 109
Query: 252 LFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFC 311
L ++M+ KG + +T +++I+ C L A + ++ G N +T++TLI+G C
Sbjct: 110 LCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLC 169
Query: 312 KLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKF 371
R+ EA E+ D M G + +T NTL++GLC S + +A L+D+M+ G +P+
Sbjct: 170 LEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAV 229
Query: 372 TYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSI 431
TY +L C++G A ++++ M + D V Y +I GLCK G ++ A L +
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 289
Query: 432 QMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGP 491
+MKGI YN +I R + +L R+M+++ P+ +T+ + G
Sbjct: 290 EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVK-EGK 348
Query: 492 IGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELIDMVMDKAKFSDRET--S 549
+ EA + EM+ RG P+ ++ L +G + +++D+++ K + T
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 408
Query: 550 MVRGFLKIRKFQDALATF 567
++ G+ K + D L F
Sbjct: 409 LINGYCKANRIDDGLELF 426
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 114/279 (40%), Gaps = 47/279 (16%)
Query: 298 RNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQL 357
RN+ L G +K ++A ++F +M + ++ L + K+++ + L
Sbjct: 52 RNLSYRERLRSGLVDIKA-DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLAL 110
Query: 358 MDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCK 417
QM ++G+ + +T + ++ +CR + A + + G EP+ +T+ TLI GLC
Sbjct: 111 CKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCL 170
Query: 418 AGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALT 477
GRV +EA+ L M+E PD +T
Sbjct: 171 EGRV-----------------------------------SEALELVDRMVEMGHKPDLIT 195
Query: 478 YKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELI--- 534
+ GLC G EA+ + +M+E G P ++ + + G+ +EL+
Sbjct: 196 INTLVNGLCLSGKE-AEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 535 ---DMVMDKAKFSDRETSMVRGFLKIRKFQDALATFGDI 570
++ +D K+S ++ G K +A F ++
Sbjct: 255 EERNIKLDAVKYS----IIIDGLCKHGSLDNAFNLFNEM 289
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 296 bits (757), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 180/596 (30%), Positives = 301/596 (50%), Gaps = 42/596 (7%)
Query: 15 GIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGA 74
G P V T N ++ ++ K+ + ++EM + PD TF L+ L EG+ + +
Sbjct: 153 GFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKS 212
Query: 75 LRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNG 134
+ ++M + G T VT N ++H +CK+GR + A+ + M S+G + D TYN L++
Sbjct: 213 SYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHD 272
Query: 135 LCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPN 194
LC+ + + ++ M + P+ TYN+LI+G G+V A ++LN+M+ SPN
Sbjct: 273 LCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPN 332
Query: 195 TITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQ 254
+T+N LI E +EA ++ ++ +KG+ P ++ L+ GLC + FD+A +
Sbjct: 333 HVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYM 392
Query: 255 EMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLK 314
MK G TY +ID LC G L+EA+ LL EM G ++VTY+ LI+GFCK+
Sbjct: 393 RMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVG 452
Query: 315 RIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYN 374
R + A+EI + G+S N + Y+TLI C+ +++A ++ + MI+EG D FT+N
Sbjct: 453 RFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFN 512
Query: 375 SLLTYYCRAGDIKRAADIVQNMTSNGCEPDIV---------------------------- 406
L+T C+AG + A + ++ MTS+G P+ V
Sbjct: 513 VLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKV 572
Query: 407 -------TYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEA 459
TYG+L+ GLCK G + A K L+S+ + YN ++ A+ + +A
Sbjct: 573 GHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKA 632
Query: 460 MRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERG-FLPEFSSFYMLA 518
+ LF EM++++ PD+ TY + GLC G + A+ F E RG LP +
Sbjct: 633 VSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV-IAILFAKEAEARGNVLPNKVMYTCFV 691
Query: 519 EGLVSLGKEETLVELIDMVMDKAKFSDRET--SMVRGFL---KIRKFQDALATFGD 569
+G+ G+ + + + + + D T +M+ G+ KI K D L G+
Sbjct: 692 DGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGN 747
Score = 223 bits (567), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 141/504 (27%), Positives = 245/504 (48%), Gaps = 1/504 (0%)
Query: 10 DMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEG 69
+M G P T+ L+K LCK +R A ++ + A D + TL+ + + G
Sbjct: 568 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 627
Query: 70 NLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEG-FNPDQFTY 128
NL A+ + +MV+ L + T L+ G C++G+ A+ F +E + G P++ Y
Sbjct: 628 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMY 687
Query: 129 NTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMIL 188
V+G+ K G K + + M G PD+ T N++I G ++G++E+ ++L +M
Sbjct: 688 TCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGN 747
Query: 189 RDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDV 248
++ PN TYN L+ K V + L R + GILPD T +SL+ G+C ++ ++
Sbjct: 748 QNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEI 807
Query: 249 AMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLID 308
+++ + +G + D +T+NMLI C+ G + A L+K M S G + + T + ++
Sbjct: 808 GLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVS 867
Query: 309 GFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKP 368
+ R +E+ + EM QGIS S Y LI+GLC+ ++ A + ++MI + P
Sbjct: 868 VLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICP 927
Query: 369 DKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLL 428
++++ + G A +++ M P I ++ TL+ CK G V A +L
Sbjct: 928 PNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELR 987
Query: 429 RSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNG 488
+ G+ L +YN +I L + A L+ EM +A TYK + RGL
Sbjct: 988 VVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLAR 1047
Query: 489 GGPIGEAVDFVIEMLERGFLPEFS 512
A + ++L RGF+ S
Sbjct: 1048 ETAFSGADIILKDLLARGFITSMS 1071
Score = 213 bits (542), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 131/434 (30%), Positives = 206/434 (47%), Gaps = 36/434 (8%)
Query: 122 NPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVE 181
N + Y+ L+ + G ++ +LE+ +M GF+P V+T N+++ + K GE
Sbjct: 120 NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 179
Query: 182 ILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 241
L +M+ R P+ T+N LI+ LC E E+++ L + + G P + T+N+++ C
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 239
Query: 242 LTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVV 301
F A+EL MK+KG D TYNMLI LC + + LL++M N V
Sbjct: 240 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 299
Query: 302 TYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 361
TYNTLI+GF ++ A ++ +EM G+S N VT+N LIDG ++A ++ M
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 359
Query: 362 IMEGLKPDKFTYNSLL-----------------------------TY------YCRAGDI 386
+GL P + +Y LL TY C+ G +
Sbjct: 360 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 419
Query: 387 KRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPV 446
A ++ M+ +G +PDIVTY LI G CK GR + A +++ I G+ Y+ +
Sbjct: 420 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 479
Query: 447 IQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERG 506
I R EA+R++ M+ + D T+ + LC G + EA +F+ M G
Sbjct: 480 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCK-AGKVAEAEEFMRCMTSDG 538
Query: 507 FLPEFSSFYMLAEG 520
LP SF L G
Sbjct: 539 ILPNTVSFDCLING 552
Score = 172 bits (436), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 180/347 (51%), Gaps = 3/347 (0%)
Query: 189 RDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDV 248
R C+ N Y+ LI +E ++++ E+ R++ G P V T N+++ G + S DV
Sbjct: 117 RLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAIL-GSVVKSGEDV 175
Query: 249 AMELF-QEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLI 307
++ F +EM + PD T+N+LI+ LC+ G E++ L+++ME SG A +VTYNT++
Sbjct: 176 SVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVL 235
Query: 308 DGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLK 367
+CK R + A E+ D M+ +G+ + TYN LI LC+S R+ L+ M +
Sbjct: 236 HWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 295
Query: 368 PDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKL 427
P++ TYN+L+ + G + A+ ++ M S G P+ VT+ LI G G + A K+
Sbjct: 296 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 355
Query: 428 LRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCN 487
++ KG+ + +Y ++ L + A + M +TY + GLC
Sbjct: 356 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK 415
Query: 488 GGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELI 534
G + EAV + EM + G P+ ++ L G +G+ +T E++
Sbjct: 416 -NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIV 461
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 295 bits (754), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 178/585 (30%), Positives = 288/585 (49%), Gaps = 48/585 (8%)
Query: 10 DMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEG 69
D+V +G+ PDV F I A CK ++ A+ + +M G+AP+ TF T++ GL G
Sbjct: 263 DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCG 322
Query: 70 NLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYN 129
D A +E+MVE G T +T ++LV G + RI DA ++EM +GF P+ YN
Sbjct: 323 RYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYN 382
Query: 130 TLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILN----- 184
L++ + G + +A+E+ D+M+ +G TYN+LI G CK G+ + A +L
Sbjct: 383 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 442
Query: 185 ------------------------------QMILRDCSPNTITYNTLISTLCKENQVEEA 214
+M+LR+ SP TLIS LCK + +A
Sbjct: 443 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 502
Query: 215 TELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDS 274
EL +KG + D T N+L+ GLC D A + +E+ +GC D +YN LI
Sbjct: 503 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 562
Query: 275 LCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRN 334
C + L+EA L EM G + TY+ LI G + ++EEA + +D+ + G+ +
Sbjct: 563 CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD 622
Query: 335 SVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQ 394
TY+ +IDG CK+ R E+ + D+M+ + ++P+ YN L+ YCR+G + A ++ +
Sbjct: 623 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 682
Query: 395 NMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRK 454
+M G P+ TY +LI G+ RVE A L ++M+G+ Y +I +
Sbjct: 683 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 742
Query: 455 RTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSF 514
+ + L REM K P+ +TY + G G + EA + EM E+G +P+ ++
Sbjct: 743 QMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGN-VTEASRLLNEMREKGIVPDSITY 801
Query: 515 YMLAEGLVSLGKEETLVELIDMVMDKAKFSDRE--TSMVRGFLKI 557
G + G V++ K SD E +++ G+ K+
Sbjct: 802 KEFIYGYLKQGG----------VLEAFKGSDEENYAAIIEGWNKL 836
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 163/353 (46%), Gaps = 37/353 (10%)
Query: 248 VAMELFQEMKTKGCQPDEFTYNMLIDSL-------------------------------- 275
+A+++F + KG P + T N+L+ SL
Sbjct: 222 LALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAIN 281
Query: 276 --CSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISR 333
C G +EEA+KL +ME +G A NVVT+NT+IDG R +EA ++M +G+
Sbjct: 282 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 341
Query: 334 NSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIV 393
+TY+ L+ GL +++R+ DA ++ +M +G P+ YN+L+ + AG + +A +I
Sbjct: 342 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 401
Query: 394 QNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRR 453
M S G TY TLI G CK G+ + A +LL+ + G + ++ VI L
Sbjct: 402 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 461
Query: 454 KRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSS 513
A+R EM+ + P + GLC G +A++ + L +GF+ + +
Sbjct: 462 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKH-SKALELWFQFLNKGFVVDTRT 520
Query: 514 FYMLAEGLVSLGKEETLVELIDMVMDKAKFSDRET--SMVRGFLKIRKFQDAL 564
L GL GK + + ++ + DR + +++ G +K +A
Sbjct: 521 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 573
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 293 bits (750), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 170/529 (32%), Positives = 275/529 (51%), Gaps = 23/529 (4%)
Query: 14 RGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGL-------- 65
R I ++ +FNILIK C H++ ++ ++ G PD TF TL+ GL
Sbjct: 135 RRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISE 194
Query: 66 --------IEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMV 117
+E G L+ A+ + +QMVE G +T N L++G C EGR+ +A + + +MV
Sbjct: 195 ALALFGYMVETGFLE-AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMV 253
Query: 118 SEGFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVE 177
+G + D TY T+VNG+CK+G K AL ++ M + PDV Y+++I LCK G
Sbjct: 254 GKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHS 313
Query: 178 EAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 237
+A + ++M+ + +PN TYN +I C + +A L R + + I PDV TFN+LI
Sbjct: 314 DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373
Query: 238 QGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCA 297
A +L EM + PD TYN +I C ++A + M S
Sbjct: 374 SASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP--- 430
Query: 298 RNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQL 357
+VVT+NT+ID +C+ KR++E ++ E+ +G+ N+ TYNTLI G C+ + A L
Sbjct: 431 -DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489
Query: 358 MDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCK 417
+MI G+ PD T N LL +C ++ A ++ + + + + D V Y +I G+CK
Sbjct: 490 FQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCK 549
Query: 418 AGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALT 477
+V+ A L S+ + G+ Q YN +I + ++A LF +M + PD T
Sbjct: 550 GSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNST 609
Query: 478 YKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGK 526
Y + RG C G I ++++ + EM GF + + M+A+ L++ G+
Sbjct: 610 YNTLIRG-CLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD-LITDGR 656
Score = 268 bits (684), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 144/425 (33%), Positives = 235/425 (55%), Gaps = 4/425 (0%)
Query: 11 MVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGN 70
MV G+ P V TFN LI LC ++ A ++ +M G GL D T+ T++ G+ + G+
Sbjct: 217 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 276
Query: 71 LDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNT 130
AL + +M E V + ++ CK+G DA EM+ +G P+ FTYN
Sbjct: 277 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 336
Query: 131 LVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRD 190
+++G C G A ++ M++ +PDV T+N+LIS K G++ EA ++ ++M+ R
Sbjct: 337 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 396
Query: 191 CSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAM 250
P+T+TYN++I CK N+ ++A + ++ S PDV TFN++I C D M
Sbjct: 397 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGM 452
Query: 251 ELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGF 310
+L +E+ +G + TYN LI C L A L +EM S G + +T N L+ GF
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512
Query: 311 CKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDK 370
C+ +++EEA E+F+ +++ I ++V YN +I G+CK +V++A L + + G++PD
Sbjct: 513 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572
Query: 371 FTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRS 430
TYN +++ +C I A + M NG EPD TY TLI G KAG ++ + +L+
Sbjct: 573 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 632
Query: 431 IQMKG 435
++ G
Sbjct: 633 MRSNG 637
Score = 258 bits (658), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/412 (32%), Positives = 224/412 (54%), Gaps = 5/412 (1%)
Query: 11 MVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGN 70
MV +G+ DV T+ ++ +CK + A+ ++ +M + PD ++ ++ L ++G+
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 311
Query: 71 LDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNT 130
A + +M+E G T N ++ GFC GR DA +++M+ NPD T+N
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 371
Query: 131 LVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRD 190
L++ K G + +A ++ D ML PD TYNS+I G CK ++A + + M
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM---- 427
Query: 191 CSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAM 250
SP+ +T+NT+I C+ +V+E +L R ++ +G++ + T+N+LI G C N + A
Sbjct: 428 ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ 487
Query: 251 ELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGF 310
+LFQEM + G PD T N+L+ C LEEAL+L + ++ S + V YN +I G
Sbjct: 488 DLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGM 547
Query: 311 CKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDK 370
CK +++EA ++F + I G+ + TYN +I G C + DA L +M G +PD
Sbjct: 548 CKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDN 607
Query: 371 FTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVE 422
TYN+L+ +AG+I ++ +++ M SNG D T ++ L GR++
Sbjct: 608 STYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI-KMVADLITDGRLD 658
Score = 229 bits (584), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 160/546 (29%), Positives = 248/546 (45%), Gaps = 82/546 (15%)
Query: 70 NLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYN 129
+LD A+ + MV T V N ++ F + R + A+S ++M + +++N
Sbjct: 86 SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145
Query: 130 TLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLC---KLGE--------VE- 177
L+ C + +L + + GF PDV T+N+L+ GLC ++ E VE
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
Query: 178 ---EAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 234
EAV + +QM+ +P IT+NTLI+ LC E +V EA L + KG+ DV T+
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 235 SLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESS 294
+++ G+C + A+ L +M+ +PD Y+ +ID LC G +A L EM
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 295 GCARNVVTYNTLIDGFCKLKRIE-----------------------------------EA 319
G A NV TYN +IDGFC R EA
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA 385
Query: 320 EEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMD-------------------- 359
E++ DEM + I ++VTYN++I G CK R +DA + D
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRA 445
Query: 360 -------QMIME----GLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTY 408
Q++ E GL + TYN+L+ +C ++ A D+ Q M S+G PD +T
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 505
Query: 409 GTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMME 468
L+ G C+ ++E A +L IQM I L AYN +I + + + EA LF +
Sbjct: 506 NILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 565
Query: 469 KADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEE 528
PD TY + G C G I +A +M + G P+ S++ L G + G+ +
Sbjct: 566 HGVEPDVQTYNVMISGFC-GKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEID 624
Query: 529 TLVELI 534
+ELI
Sbjct: 625 KSIELI 630
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 177/341 (51%), Gaps = 4/341 (1%)
Query: 9 ADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEE 68
++M+ +GI P+V T+N +I C + A ++ +M + PD TF L+ ++E
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 379
Query: 69 GNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTY 128
G L A ++ ++M+ VT N +++GFCK R +DA M S PD T+
Sbjct: 380 GKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTF 435
Query: 129 NTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMIL 188
NT+++ C+ V + ++++ + + G + TYN+LI G C++ + A ++ +MI
Sbjct: 436 NTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMIS 495
Query: 189 RDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDV 248
P+TIT N L+ C+ ++EEA EL V+ I D +N +I G+C S D
Sbjct: 496 HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE 555
Query: 249 AMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLID 308
A +LF + G +PD TYN++I C + + +A L +M+ +G + TYNTLI
Sbjct: 556 AWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 615
Query: 309 GFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSR 349
G K I+++ E+ EM G S ++ T + D + R
Sbjct: 616 GCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGR 656
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 170/372 (45%), Gaps = 21/372 (5%)
Query: 166 LISGLCKLGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKG 225
L SG +++A++ + M+ + N +I + N+ + A L R + +
Sbjct: 77 LKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRR 136
Query: 226 ILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEAL 285
I ++ +FN LI+ C ++ F ++ G QPD T+N L+ LC + EAL
Sbjct: 137 IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEAL 196
Query: 286 KLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGL 345
L M +G EA +FD+M G++ +T+NTLI+GL
Sbjct: 197 ALFGYMVETG--------------------FLEAVALFDQMVEIGLTPVVITFNTLINGL 236
Query: 346 CKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDI 405
C RV +AA L+++M+ +GL D TY +++ C+ GD K A +++ M +PD+
Sbjct: 237 CLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDV 296
Query: 406 VTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFRE 465
V Y +I LCK G A L + KGI YN +I R ++A RL R+
Sbjct: 297 VIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRD 356
Query: 466 MMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLG 525
M+E+ PD LT+ + G + EA EML R P+ ++ + G
Sbjct: 357 MIEREINPDVLTFNALISASVK-EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN 415
Query: 526 KEETLVELIDMV 537
+ + + D++
Sbjct: 416 RFDDAKHMFDLM 427
Score = 145 bits (367), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 99/323 (30%), Positives = 152/323 (47%), Gaps = 23/323 (7%)
Query: 247 DVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTL 306
DVA+ L+++M+ + + +++N+LI C L +L ++ G +VVT+NTL
Sbjct: 123 DVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTL 182
Query: 307 IDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGL 366
+ G C RI EA +F M G +A L DQM+ GL
Sbjct: 183 LHGLCLEDRISEALALFGYMVETGFL--------------------EAVALFDQMVEIGL 222
Query: 367 KPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASK 426
P T+N+L+ C G + AA +V M G D+VTYGT++ G+CK G + A
Sbjct: 223 TPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALN 282
Query: 427 LLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLC 486
LL ++ I Y+ +I L + ++A LF EM+EK P+ TY + G C
Sbjct: 283 LLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFC 342
Query: 487 NGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELIDMVMDKAKFSDR 546
+ G +A + +M+ER P+ +F L V GK +L D ++ + F D
Sbjct: 343 SFG-RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT 401
Query: 547 ET--SMVRGFLKIRKFQDALATF 567
T SM+ GF K +F DA F
Sbjct: 402 VTYNSMIYGFCKHNRFDDAKHMF 424
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 16/170 (9%)
Query: 411 LIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKA 470
+IG + R +VA L R ++++ I L ++N +I+ + + ++ F ++ +
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171
Query: 471 DPPDALTYKHVFRGLC------NGGGPIG--------EAVDFVIEMLERGFLPEFSSFYM 516
PD +T+ + GLC G EAV +M+E G P +F
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231
Query: 517 LAEGLVSLGKEETLVELIDMVMDKAKFSDRET--SMVRGFLKIRKFQDAL 564
L GL G+ L++ ++ K D T ++V G K+ + AL
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSAL 281
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 289 bits (739), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 154/420 (36%), Positives = 232/420 (55%)
Query: 18 PDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGALRI 77
P ++ F+ L+ A+ K + I + E+M G+ + T L+ L AL
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 78 REQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCK 137
+M++ G + VT L++GFC+ R+ DAL +MV G+ P+ YNT+++GLCK
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 138 VGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTIT 197
V AL++++ M ++G PDV TYNSLISGLC G +A +++ M R+ P+ T
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 198 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMK 257
+N LI KE +V EA E + + + PD+ T++ LI GLC+ S D A E+F M
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 258 TKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIE 317
+KGC PD TY++LI+ C +E +KL EM G RN VTY LI G+C+ ++
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378
Query: 318 EAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLL 377
AEEIF M G+ N +TYN L+ GLC + ++E A ++ M G+ D TYN ++
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIII 438
Query: 378 TYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIV 437
C+AG++ A DI ++ G PDI TY T++ GL K G A L R ++ GI+
Sbjct: 439 RGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGIL 498
Score = 284 bits (727), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 151/422 (35%), Positives = 239/422 (56%)
Query: 53 PDERTFTTLMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSF 112
P F+ L+ + + D + + EQM G T N+L++ FC+ ++ ALSF
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 113 IQEMVSEGFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCK 172
+ +M+ G P T+ +L+NG C+ V AL + D M+ G+ P+V YN++I GLCK
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 173 LGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCT 232
+V+ A+++LN+M P+ +TYN+LIS LC + +AT + +T + I PDV T
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 233 FNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEME 292
FN+LI A E ++EM + PD TY++LI LC L+EA ++ M
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 293 SSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVE 352
S GC +VVTY+ LI+G+CK K++E ++F EM +G+ RN+VTY LI G C++ ++
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378
Query: 353 DAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLI 412
A ++ +M+ G+ P+ TYN LL C G I++A I+ +M NG + DIVTY +I
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIII 438
Query: 413 GGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADP 472
G+CKAG V A + S+ +G++ Y ++ L+++ EA LFR+M E
Sbjct: 439 RGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGIL 498
Query: 473 PD 474
P+
Sbjct: 499 PN 500
Score = 244 bits (622), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/390 (33%), Positives = 207/390 (53%)
Query: 15 GIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGA 74
GI ++ T NIL+ C+ Q+ A+ + +M G P TF +L+ G + A
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDA 170
Query: 75 LRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNG 134
L + +QMV G V N ++ G CK ++++AL + M +G PD TYN+L++G
Sbjct: 171 LYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISG 230
Query: 135 LCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPN 194
LC G A ++ M + PDVFT+N+LI K G V EA E +MI R P+
Sbjct: 231 LCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPD 290
Query: 195 TITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQ 254
+TY+ LI LC ++++EA E+ + SKG PDV T++ LI G C + + M+LF
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFC 350
Query: 255 EMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLK 314
EM +G + TY +LI C G L A ++ + M G N++TYN L+ G C
Sbjct: 351 EMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNG 410
Query: 315 RIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYN 374
+IE+A I +M+ G+ + VTYN +I G+CK+ V DA + + +GL PD +TY
Sbjct: 411 KIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYT 470
Query: 375 SLLTYYCRAGDIKRAADIVQNMTSNGCEPD 404
+++ + G + A + + M +G P+
Sbjct: 471 TMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 235 bits (600), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 121/370 (32%), Positives = 200/370 (54%)
Query: 1 LKLVETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTT 60
L L + M+ G +P + TF L+ C+ ++ A+ M ++M G G P+ + T
Sbjct: 132 LSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNT 191
Query: 61 LMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEG 120
++ GL + +D AL + +M + G VT N L+ G C GR DA + M
Sbjct: 192 IIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKRE 251
Query: 121 FNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAV 180
PD FT+N L++ K G V +A E + M++ DPD+ TY+ LI GLC ++EA
Sbjct: 252 IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAE 311
Query: 181 EILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 240
E+ M+ + C P+ +TY+ LI+ CK +VE +L ++ +G++ + T+ LIQG
Sbjct: 312 EMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGY 371
Query: 241 CLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNV 300
C +VA E+F+ M G P+ TYN+L+ LC G +E+AL +L +M+ +G ++
Sbjct: 372 CRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADI 431
Query: 301 VTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQ 360
VTYN +I G CK + +A +I+ + QG+ + TY T++ GL K +A L +
Sbjct: 432 VTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRK 491
Query: 361 MIMEGLKPDK 370
M +G+ P++
Sbjct: 492 MKEDGILPNE 501
Score = 207 bits (528), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 214/421 (50%), Gaps = 1/421 (0%)
Query: 105 RIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYN 164
+++D+L MV P ++ L++ + K+ + + + M G ++ T N
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 165 SLISGLCKLGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSK 224
L++ C+ ++ A+ L +MI P+ +T+ +L++ C+ ++V +A + +
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 225 GILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEA 284
G P+V +N++I GLC + D A++L M+ G PD TYN LI LCS G +A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 285 LKLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDG 344
+++ M +V T+N LID K R+ EAEE ++EM + + + VTY+ LI G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 345 LCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPD 404
LC R+++A ++ M+ +G PD TY+ L+ YC++ ++ + M+ G +
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 405 IVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFR 464
VTY LI G C+AG++ VA ++ R + G+ YN ++ L + +A+ +
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILA 420
Query: 465 EMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSL 524
+M + D +TY + RG+C G + +A D + +G +P+ ++ + GL
Sbjct: 421 DMQKNGMDADIVTYNIIIRGMCK-AGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKK 479
Query: 525 G 525
G
Sbjct: 480 G 480
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 123/430 (28%), Positives = 201/430 (46%), Gaps = 16/430 (3%)
Query: 97 VHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGF 156
+ GFC R S +EM+ G + + +L++ M+Q
Sbjct: 33 ICGFCFSRRAYSNGSDYREMLRNGI---------------RFMKLDDSLDLFFHMVQCRP 77
Query: 157 DPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATE 216
P + ++ L+S + K+ + + + + QM + N T N L++ C+ +Q+ A
Sbjct: 78 LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS 137
Query: 217 LARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLC 276
+ G P + TF SL+ G C A+ +F +M G +P+ YN +ID LC
Sbjct: 138 FLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLC 197
Query: 277 SRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSV 336
++ AL LL ME G +VVTYN+LI G C R +A + M + I +
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVF 257
Query: 337 TYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNM 396
T+N LID K RV +A + ++MI L PD TY+ L+ C + A ++ M
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM 317
Query: 397 TSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRT 456
S GC PD+VTY LI G CK+ +VE KL + +G+V Y +IQ R +
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKL 377
Query: 457 TEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYM 516
A +FR M+ P+ +TY + GLC+ G I +A+ + +M + G + ++ +
Sbjct: 378 NVAEEIFRRMVFCGVHPNIITYNVLLHGLCD-NGKIEKALVILADMQKNGMDADIVTYNI 436
Query: 517 LAEGLVSLGK 526
+ G+ G+
Sbjct: 437 IIRGMCKAGE 446
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 125/227 (55%)
Query: 5 ETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQG 64
E + +M+ R + PD+ T+++LI LC ++ A M M G PD T++ L+ G
Sbjct: 276 EEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILING 335
Query: 65 LIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPD 124
+ ++ +++ +M + G + VT +L+ G+C+ G++ A + MV G +P+
Sbjct: 336 YCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPN 395
Query: 125 QFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILN 184
TYN L++GLC G +++AL ++ M + G D D+ TYN +I G+CK GEV +A +I
Sbjct: 396 IITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYC 455
Query: 185 QMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVC 231
+ + P+ TY T++ L K+ EA L R + GILP+ C
Sbjct: 456 SLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNEC 502
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 287 bits (734), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 150/474 (31%), Positives = 256/474 (54%)
Query: 15 GIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGA 74
GI ++ T NI+I C+ + A ++ ++ G PD TF TL++GL EG + A
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 75 LRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNG 134
+ + ++MVE+GC VT N +V+G C+ G AL +++M D FTY+T+++
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237
Query: 135 LCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPN 194
LC+ G + A+ + M +G V TYNSL+ GLCK G+ + +L M+ R+ PN
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297
Query: 195 TITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQ 254
IT+N L+ KE +++EA EL + + ++GI P++ T+N+L+ G C+ + A +
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 357
Query: 255 EMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLK 314
M C PD T+ LI C +++ +K+ + + G N VTY+ L+ GFC+
Sbjct: 358 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSG 417
Query: 315 RIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYN 374
+I+ AEE+F EM G+ + +TY L+DGLC + ++E A ++ + + + Y
Sbjct: 418 KIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYT 477
Query: 375 SLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMK 434
+++ C+ G ++ A ++ ++ G +P+++TY +I GLCK G + A+ LLR ++
Sbjct: 478 TIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEED 537
Query: 435 GIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNG 488
G YN +I+A R T + +L EM DA + K V L +G
Sbjct: 538 GNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSG 591
Score = 276 bits (706), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 158/512 (30%), Positives = 277/512 (54%), Gaps = 2/512 (0%)
Query: 39 AILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVH 98
AI + +EM P F+ + + L +Q+ +G T+N++++
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131
Query: 99 GFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDP 158
FC+ + A S + +++ G+ PD T+NTL+ GL G V +A+ ++D M++ G P
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 191
Query: 159 DVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELA 218
DV TYNS+++G+C+ G+ A+++L +M R+ + TY+T+I +LC++ ++ A L
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 219 RVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSR 278
+ + +KGI V T+NSL++GLC ++ L ++M ++ P+ T+N+L+D
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 311
Query: 279 GMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTY 338
G L+EA +L KEM + G + N++TYNTL+DG+C R+ EA + D M S + VT+
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371
Query: 339 NTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTS 398
+LI G C +RV+D ++ + GL + TY+ L+ +C++G IK A ++ Q M S
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 431
Query: 399 NGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTE 458
+G PD++TYG L+ GLC G++E A ++ +Q + L Y +I+ + + + +
Sbjct: 432 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED 491
Query: 459 AMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLA 518
A LF + K P+ +TY + GLC G + EA + +M E G P ++ L
Sbjct: 492 AWNLFCSLPCKGVKPNVMTYTVMISGLCK-KGSLSEANILLRKMEEDGNAPNDCTYNTLI 550
Query: 519 EGLVSLGKEETLVELIDMVMDKAKFSDRETSM 550
+ G +LI+ M FS +S+
Sbjct: 551 RAHLRDGDLTASAKLIEE-MKSCGFSADASSI 581
Score = 259 bits (663), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 127/394 (32%), Positives = 227/394 (57%)
Query: 11 MVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGN 70
MV G +PDV T+N ++ +C++ A+ ++ +M + D T++T++ L +G
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC 243
Query: 71 LDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNT 130
+D A+ + ++M G + VT N LV G CK G+ D +++MVS P+ T+N
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303
Query: 131 LVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRD 190
L++ K G +++A E+ M+ G P++ TYN+L+ G C + EA +L+ M+
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363
Query: 191 CSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAM 250
CSP+ +T+ +LI C +V++ ++ R ++ +G++ + T++ L+QG C + +A
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423
Query: 251 ELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGF 310
ELFQEM + G PD TY +L+D LC G LE+AL++ ++++ S +V Y T+I+G
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483
Query: 311 CKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDK 370
CK ++E+A +F + +G+ N +TY +I GLCK + +A L+ +M +G P+
Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPND 543
Query: 371 FTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPD 404
TYN+L+ + R GD+ +A +++ M S G D
Sbjct: 544 CTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 577
Score = 186 bits (471), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 180/336 (53%)
Query: 10 DMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEG 69
+M ++GIK V T+N L++ LCKA + L++++M + P+ TF L+ ++EG
Sbjct: 253 EMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEG 312
Query: 70 NLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYN 129
L A + ++M+ G +T N L+ G+C + R+ +A + + MV +PD T+
Sbjct: 313 KLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFT 372
Query: 130 TLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILR 189
+L+ G C V V ++V + + G + TY+ L+ G C+ G+++ A E+ +M+
Sbjct: 373 SLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSH 432
Query: 190 DCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVA 249
P+ +TY L+ LC ++E+A E+ L + + + ++I+G+C + A
Sbjct: 433 GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDA 492
Query: 250 MELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDG 309
LF + KG +P+ TY ++I LC +G L EA LL++ME G A N TYNTLI
Sbjct: 493 WNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
Query: 310 FCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGL 345
+ + + ++ +EM+ G S ++ + +ID L
Sbjct: 553 HLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 176 bits (445), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 158/281 (56%)
Query: 8 HADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIE 67
+ +M++RGI P++ T+N L+ C +++ A M++ M +PD TFT+L++G
Sbjct: 321 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCM 380
Query: 68 EGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFT 127
+D +++ + + G + VT ++LV GFC+ G+I+ A QEMVS G PD T
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440
Query: 128 YNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMI 187
Y L++GLC G +++ALE+ + + + D + Y ++I G+CK G+VE+A + +
Sbjct: 441 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 500
Query: 188 LRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFD 247
+ PN +TY +IS LCK+ + EA L R + G P+ CT+N+LI+ +
Sbjct: 501 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLT 560
Query: 248 VAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLL 288
+ +L +EMK+ G D + M+ID L S + + L +L
Sbjct: 561 ASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDKSFLDML 601
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 163/326 (50%), Gaps = 3/326 (0%)
Query: 247 DVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTL 306
D A+ LFQEM P ++ ++ L K++E +G A N+ T N +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 307 IDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGL 366
I+ FC+ + A + ++ G ++ T+NTLI GL +V +A L+D+M+ G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 367 KPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASK 426
+PD TYNS++ CR+GD A D+++ M + D+ TY T+I LC+ G ++ A
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 427 LLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLC 486
L + ++ KGI + YN +++ L + + + L ++M+ + P+ +T+ +V +
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITF-NVLLDVF 308
Query: 487 NGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELIDMVMDKAKFSD- 545
G + EA + EM+ RG P ++ L +G + ++D+++ D
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368
Query: 546 -RETSMVRGFLKIRKFQDALATFGDI 570
TS+++G+ +++ D + F +I
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNI 394
Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 94/179 (52%), Gaps = 1/179 (0%)
Query: 1 LKLVETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTT 60
+KL E +MVS G+ PDV T+ IL+ LC ++ A+ + E++ + +TT
Sbjct: 419 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT 478
Query: 61 LMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEG 120
+++G+ + G ++ A + + G +T V++ G CK+G + +A +++M +G
Sbjct: 479 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 538
Query: 121 FNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEA 179
P+ TYNTL+ + G + + ++++ M GF D + +I L GE++++
Sbjct: 539 NAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLS-GELDKS 596
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 283 bits (723), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 173/548 (31%), Positives = 267/548 (48%), Gaps = 28/548 (5%)
Query: 1 LKLVETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTT 60
++ V + DMV GI P TFN+LI+ALC + + A + +EMP G P+E TF
Sbjct: 128 VEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGI 187
Query: 61 LMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEG 120
L++G + G D L + M G L V N +V FC+EGR +D+ +++M EG
Sbjct: 188 LVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEG 247
Query: 121 FNPDQFTYNTLVNGLCKVGHVKQALEVM-DMMLQEGFD---PDVFTYNSLISGLCKLGEV 176
PD T+N+ ++ LCK G V A + DM L E P+ TYN ++ G CK+G +
Sbjct: 248 LVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLL 307
Query: 177 EEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSL 236
E+A + + D + +YN + L + + EA + + +T KGI P + ++N L
Sbjct: 308 EDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNIL 367
Query: 237 IQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGC 296
+ GLC A + MK G PD TY L+ CS G ++ A LL+EM + C
Sbjct: 368 MDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNC 427
Query: 297 ARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQ 356
N T N L+ K+ RI EAEE+ +M +G ++VT N ++DGLC S ++ A +
Sbjct: 428 LPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIE 487
Query: 357 LM-----------------------DQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIV 393
++ D +I PD TY++LL C+AG A ++
Sbjct: 488 IVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLF 547
Query: 394 QNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRR 453
M +PD V Y I CK G++ A ++L+ ++ KG + + YN +I L +
Sbjct: 548 AEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIK 607
Query: 454 KRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSS 513
+ E L EM EK P+ TY + LC G + +A + + EM+++ P S
Sbjct: 608 NQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCE-GEKVEDATNLLDEMMQKNIAPNVFS 666
Query: 514 FYMLAEGL 521
F L E
Sbjct: 667 FKYLIEAF 674
Score = 248 bits (634), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 156/556 (28%), Positives = 259/556 (46%), Gaps = 96/556 (17%)
Query: 11 MVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMP---GYGLA-PDERTFTTLMQGLI 66
M G+ PD+ TFN I ALCK ++ A + +M GL P+ T+ +++G
Sbjct: 243 MREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFC 302
Query: 67 EEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQF 126
+ G L+ A + E + E+ L + + N+ + G + G+ +A + +++M +G P +
Sbjct: 303 KVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIY 362
Query: 127 TYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQM 186
+YN L++GLCK+G + A ++ +M + G PD TY L+ G C +G+V+ A +L +M
Sbjct: 363 SYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEM 422
Query: 187 ILRDCSPN-----------------------------------TITYNTLISTLCKENQV 211
+ +C PN T+T N ++ LC ++
Sbjct: 423 MRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGEL 482
Query: 212 EEATELARVLTSKG-----------------------ILPDVCTFNSLIQGLCLTSNFDV 248
++A E+ + + G LPD+ T+++L+ GLC F
Sbjct: 483 DKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAE 542
Query: 249 AMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLID 308
A LF EM + QPD YN+ I C +G + A ++LK+ME GC +++ TYN+LI
Sbjct: 543 AKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLIL 602
Query: 309 GFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKP 368
G +I E + DEM+ +GIS N TYNT I LC+ +VEDA L+D+M+ + + P
Sbjct: 603 GLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAP 662
Query: 369 DKFTYNSLLTYYCR----------------------------------AGDIKRAADIVQ 394
+ F++ L+ +C+ AG + +A ++++
Sbjct: 663 NVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLE 722
Query: 395 NMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRK 454
+ G E Y L+ LCK +EVAS +L + +G P A PVI L +
Sbjct: 723 AVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMG 782
Query: 455 RTTEAMRLFREMMEKA 470
EA +MME A
Sbjct: 783 NKKEANSFADKMMEMA 798
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 189/353 (53%), Gaps = 5/353 (1%)
Query: 193 PNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMEL 252
P+ YN L+ + KE +VE + L + + GI P TFN LI+ LC +S D A EL
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 253 FQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCK 312
F EM KGC+P+EFT+ +L+ C G+ ++ L+LL MES G N V YNT++ FC+
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 313 LKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME---GL-KP 368
R +++E++ ++M +G+ + VT+N+ I LCK +V DA+++ M ++ GL +P
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289
Query: 369 DKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLL 428
+ TYN +L +C+ G ++ A + +++ N + +Y + GL + G+ A +L
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL 349
Query: 429 RSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNG 488
+ + KGI + +YN ++ L + ++A + M PDA+TY + G C+
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS- 408
Query: 489 GGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELIDMVMDKA 541
G + A + EM+ LP + +L L +G+ EL+ + +K
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKG 461
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 136/291 (46%), Gaps = 4/291 (1%)
Query: 18 PDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGALRI 77
PD+ T++ L+ LCKA + A + EM G L PD + + ++G + A R+
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 78 REQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCK 137
+ M + GC + T N L+ G + +I + + EM +G +P+ TYNT + LC+
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCE 641
Query: 138 VGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTIT 197
V+ A ++D M+Q+ P+VF++ LI CK+ + + A E+ + + C
Sbjct: 642 GEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF-ETAVSICGQKEGL 700
Query: 198 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMK 257
Y+ + + L Q+ +ATEL + +G + L++ LC +VA + +M
Sbjct: 701 YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMI 760
Query: 258 TKGCQPDEFTYNMLIDSLCSRGMLEEALKL---LKEMESSGCARNVVTYNT 305
+G D +ID L G +EA + EM S G N V N
Sbjct: 761 DRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMASVGEVANKVDPNA 811
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 112/237 (47%), Gaps = 11/237 (4%)
Query: 9 ADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEE 68
A+M+ ++PD +NI I CK +I A ++++M G T+ +L+ GL +
Sbjct: 548 AEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIK 607
Query: 69 GNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTY 128
+ + ++M E G T N + C+ ++EDA + + EM+ + P+ F++
Sbjct: 608 NQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSF 667
Query: 129 NTLVNGLCKVGHVKQALEVMDMML-----QEGFDPDVFTYNSLISGLCKLGEVEEAVEIL 183
L+ CKV A EV + + +EG Y+ + + L G++ +A E+L
Sbjct: 668 KYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL------YSLMFNELLAAGQLLKATELL 721
Query: 184 NQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 240
++ R T Y L+ +LCK++++E A+ + + +G D +I GL
Sbjct: 722 EAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGL 778
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 104/235 (44%), Gaps = 34/235 (14%)
Query: 338 YNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMT 397
YN L++ K RRVE + L M++ G+ P +T+N L+ C + + A ++ M
Sbjct: 115 YNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMP 174
Query: 398 SNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTT 457
GC+P+ T+G L+ G CKAG + +LL +++ G++ YN ++ + R R
Sbjct: 175 EKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRND 234
Query: 458 EAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFV-IEMLERGFLPEFSSF-Y 515
++ ++ +M E+ PD +T+ LC G + + F +E+ E LP +S Y
Sbjct: 235 DSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITY 294
Query: 516 MLAEGLVSLGKEETLVELIDMVMDKAKFSDRETSMVRGFLKIRKFQDALATFGDI 570
L M++GF K+ +DA F I
Sbjct: 295 NL--------------------------------MLKGFCKVGLLEDAKTLFESI 317
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 283 bits (723), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 164/530 (30%), Positives = 269/530 (50%), Gaps = 10/530 (1%)
Query: 4 VETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQ 63
++ + +M+ + P++ T+N ++ CK + A + ++ GL PD T+T+L+
Sbjct: 202 MKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIM 261
Query: 64 GLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNP 123
G + +LD A ++ +M GC V L+HG C RI++A+ +M + P
Sbjct: 262 GYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFP 321
Query: 124 DQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEIL 183
TY L+ LC +AL ++ M + G P++ TY LI LC + E+A E+L
Sbjct: 322 TVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELL 381
Query: 184 NQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLT 243
QM+ + PN ITYN LI+ CK +E+A ++ ++ S+ + P+ T+N LI+G C
Sbjct: 382 GQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-K 440
Query: 244 SNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTY 303
SN AM + +M + PD TYN LID C G + A +LL M G + TY
Sbjct: 441 SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTY 500
Query: 304 NTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIM 363
++ID CK KR+EEA ++FD +E +G++ N V Y LIDG CK+ +V++A ++++M+
Sbjct: 501 TSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLS 560
Query: 364 EGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEV 423
+ P+ T+N+L+ C G +K A + + M G +P + T LI L K G +
Sbjct: 561 KNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDH 620
Query: 424 ASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFR 483
A + + G Y IQ R R +A + +M E PD TY + +
Sbjct: 621 AYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIK 680
Query: 484 GLCNGGGPIGE---AVDFVIEMLERGFLPEFSSFYMLAEGLVSL--GKEE 528
G G +G+ A D + M + G P +F L + L+ + GK++
Sbjct: 681 GY----GDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQK 726
Score = 272 bits (695), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 151/432 (34%), Positives = 242/432 (56%), Gaps = 2/432 (0%)
Query: 94 NVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQ 153
N L++ + G +++ EM+ + P+ +TYN +VNG CK+G+V++A + + +++
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE 246
Query: 154 EGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEE 213
G DPD FTY SLI G C+ +++ A ++ N+M L+ C N + Y LI LC +++E
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDE 306
Query: 214 ATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLID 273
A +L + P V T+ LI+ LC + A+ L +EM+ G +P+ TY +LID
Sbjct: 307 AMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLID 366
Query: 274 SLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISR 333
SLCS+ E+A +LL +M G NV+TYN LI+G+CK IE+A ++ + ME + +S
Sbjct: 367 SLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSP 426
Query: 334 NSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIV 393
N+ TYN LI G CKS V A ++++M+ + PD TYNSL+ CR+G+ A ++
Sbjct: 427 NTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Query: 394 QNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRR 453
M G PD TY ++I LCK+ RVE A L S++ KG+ Y +I +
Sbjct: 486 SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKA 545
Query: 454 KRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSS 513
+ EA + +M+ K P++LT+ + GLC G + EA +M++ G P S+
Sbjct: 546 GKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLC-ADGKLKEATLLEEKMVKIGLQPTVST 604
Query: 514 FYMLAEGLVSLG 525
+L L+ G
Sbjct: 605 DTILIHRLLKDG 616
Score = 263 bits (671), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 158/538 (29%), Positives = 267/538 (49%), Gaps = 39/538 (7%)
Query: 58 FTTLMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMV 117
+ TL+ L G +D ++ +M+E T N +V+G+CK G +E+A ++ ++V
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 118 SEGFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVE 177
G +PD FTY +L+ G C+ + A +V + M +G + Y LI GLC ++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 178 EAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 237
EA+++ +M +C P TY LI +LC + EA L + + GI P++ T+ LI
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 238 QGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCA 297
LC F+ A EL +M KG P+ TYN LI+ C RGM+E+A+ +++ MES +
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 298 RNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQL 357
N TYN LI G+CK + +A + ++M + + + VTYN+LIDG C+S + A +L
Sbjct: 426 PNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 358 MDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCK 417
+ M GL PD++TY S++ C++ ++ A D+ ++ G P++V Y LI G CK
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 418 AGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRL--------------- 462
AG+V+ A +L + K + +N +I L + EA L
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVST 604
Query: 463 --------------------FREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEM 502
F++M+ PDA TY + C G + +A D + +M
Sbjct: 605 DTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLL-DAEDMMAKM 663
Query: 503 LERGFLPEFSSFYMLAEGLVSLGKEETLVELIDMVMDKAKFSDRET--SMVRGFLKIR 558
E G P+ ++ L +G LG+ +++ + D + T S+++ L+++
Sbjct: 664 RENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMK 721
Score = 259 bits (662), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 152/448 (33%), Positives = 239/448 (53%), Gaps = 4/448 (0%)
Query: 128 YNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMI 187
YNTL+N L + G V + +V ML++ P+++TYN +++G CKLG VEEA + +++++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 188 LRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFD 247
P+ TY +LI C+ ++ A ++ + KG + + LI GLC+ D
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 248 VAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLI 307
AM+LF +MK C P TY +LI SLC EAL L+KEME +G N+ TY LI
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 308 DGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLK 367
D C + E+A E+ +M +G+ N +TYN LI+G CK +EDA +++ M L
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 368 PDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKL 427
P+ TYN L+ YC++ ++ +A ++ M PD+VTY +LI G C++G + A +L
Sbjct: 426 PNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 428 LRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCN 487
L + +G+V Y +I +L + KR EA LF + +K P+ + Y + G C
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 488 GGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLG--KEETLVELIDMVMDKAKFSD 545
G + EA + +ML + LP +F L GL + G KE TL+E + +
Sbjct: 545 -AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVS 603
Query: 546 RETSMVRGFLKIRKFQDALATFGDILDS 573
+T ++ LK F A + F +L S
Sbjct: 604 TDTILIHRLLKDGDFDHAYSRFQQMLSS 631
Score = 241 bits (615), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 148/531 (27%), Positives = 271/531 (51%), Gaps = 25/531 (4%)
Query: 11 MVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGN 70
M+ +G+ P+V T+N LI CK I A+ ++E M L+P+ RT+ L++G + N
Sbjct: 384 MLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SN 442
Query: 71 LDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNT 130
+ A+ + +M+E L VT N L+ G C+ G + A + M G PDQ+TY +
Sbjct: 443 VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTS 502
Query: 131 LVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRD 190
+++ LCK V++A ++ D + Q+G +P+V Y +LI G CK G+V+EA +L +M+ ++
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 191 CSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAM 250
C PN++T+N LI LC + +++EAT L + G+ P V T LI L +FD A
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY 622
Query: 251 ELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGF 310
FQ+M + G +PD TY I + C G L +A ++ +M +G + ++ TY++LI G+
Sbjct: 623 SRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGY 682
Query: 311 CKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSR------------------RVE 352
L + A ++ M G + T+ +LI L + + +
Sbjct: 683 GDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFD 742
Query: 353 DAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSN-GCEPDIVTYGTL 411
+L+++M+ + P+ +Y L+ C G+++ A + +M N G P + + L
Sbjct: 743 TVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNAL 802
Query: 412 IGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKAD 471
+ CK + A+K++ + G + ++ +I L+++ +F+ +++
Sbjct: 803 LSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGY 862
Query: 472 PPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSS--FYMLAEG 520
D L +K + G+ G + EA + ++E+ +FSS + +L EG
Sbjct: 863 YEDELAWKIIIDGV--GKQGLVEAFYELFNVMEKNGC-KFSSQTYSLLIEG 910
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 280 bits (717), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 164/482 (34%), Positives = 255/482 (52%), Gaps = 3/482 (0%)
Query: 10 DMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPG-YGLAPDERTFTTLMQGLIEE 68
DMV G+ +V TFN+L+ C ++ A+ M+E M + + PD T+ T+++ + ++
Sbjct: 194 DMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKK 253
Query: 69 GNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTY 128
G L + M ++G + VT N LV+G+CK G +++A ++ M PD TY
Sbjct: 254 GRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTY 313
Query: 129 NTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMIL 188
N L+NGLC G +++ LE+MD M PDV TYN+LI G +LG EA +++ QM
Sbjct: 314 NILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMEN 373
Query: 189 RDCSPNTITYNTLISTLCKENQVEEATELARVLTS-KGILPDVCTFNSLIQGLCLTSNFD 247
N +T+N + LCKE + E T + L G PD+ T+++LI+ +
Sbjct: 374 DGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLS 433
Query: 248 VAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLI 307
A+E+ +EM KG + + T N ++D+LC L+EA LL G + VTY TLI
Sbjct: 434 GALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLI 493
Query: 308 DGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLK 367
GF + +++E+A E++DEM+ I+ T+N+LI GLC + E A + D++ GL
Sbjct: 494 MGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLL 553
Query: 368 PDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKL 427
PD T+NS++ YC+ G +++A + + +PD T L+ GLCK G E A
Sbjct: 554 PDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNF 613
Query: 428 LRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCN 487
++ + V T YN +I A + K+ EA L EM EK PD TY L
Sbjct: 614 FNTLIEEREVDT-VTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLME 672
Query: 488 GG 489
G
Sbjct: 673 DG 674
Score = 256 bits (654), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 168/574 (29%), Positives = 283/574 (49%), Gaps = 46/574 (8%)
Query: 18 PDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLI---EEGNLDGA 74
P + F+I + A + A+ + ++M L P+ T TL+ GL+ ++ A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 75 LRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSE-GFNPDQFTYNTLVN 133
+ + MV+ G + T NVLV+G+C EG++EDAL ++ MVSE NPD TYNT++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 134 GLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSP 193
+ K G + E++ M + G P+ TYN+L+ G CKLG ++EA +I+ M + P
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 194 NTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDV-AMEL 252
+ TYN LI+ LC + E EL + S + PDV T+N+LI G C + A +L
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDG-CFELGLSLEARKL 367
Query: 253 FQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEM-ESSGCARNVVTYNTLIDGFC 311
++M+ G + ++ T+N+ + LC E + +KE+ + G + ++VTY+TLI +
Sbjct: 368 MEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYL 427
Query: 312 KLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKF 371
K+ + A E+ EM +GI N++T NT++D LCK R++++A L++ G D+
Sbjct: 428 KVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEV 487
Query: 372 TYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSI 431
TY +L+ + R +++A ++ M P + T+ +LIGGLC G+ E+A + +
Sbjct: 488 TYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDEL 547
Query: 432 QMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGG-- 489
G++ +N +I + R +A + E ++ + PD T + GLC G
Sbjct: 548 AESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMT 607
Query: 490 -------------------------------GPIGEAVDFVIEMLERGFLPEFSSFYMLA 518
+ EA D + EM E+G P+ ++
Sbjct: 608 EKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFI 667
Query: 519 EGLVSLGKEETLVELIDMVMDKAKFSDRETSMVR 552
L+ GK EL+ KFS + SM R
Sbjct: 668 SLLMEDGKLSETDELL------KKFSGKFGSMKR 695
Score = 238 bits (607), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 143/488 (29%), Positives = 257/488 (52%), Gaps = 8/488 (1%)
Query: 94 NVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCKVGH---VKQALEVMDM 150
++ + + EG+ AL Q+M+ P+ T NTL+ GL + + A EV D
Sbjct: 135 DIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDD 194
Query: 151 MLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILR-DCSPNTITYNTLISTLCKEN 209
M++ G +V T+N L++G C G++E+A+ +L +M+ +P+ +TYNT++ + K+
Sbjct: 195 MVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKG 254
Query: 210 QVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYN 269
++ + EL + G++P+ T+N+L+ G C + A ++ + MK PD TYN
Sbjct: 255 RLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYN 314
Query: 270 MLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQ 329
+LI+ LC+ G + E L+L+ M+S +VVTYNTLIDG +L EA ++ ++ME
Sbjct: 315 ILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMEND 374
Query: 330 GISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI-MEGLKPDKFTYNSLLTYYCRAGDIKR 388
G+ N VT+N + LCK + E + + +++ M G PD TY++L+ Y + GD+
Sbjct: 375 GVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSG 434
Query: 389 AADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQ 448
A ++++ M G + + +T T++ LCK +++ A LL S +G ++ Y +I
Sbjct: 435 ALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIM 494
Query: 449 ALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFL 508
FR ++ +A+ ++ EM + P T+ + GLC+ G A++ E+ E G L
Sbjct: 495 GFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGK-TELAMEKFDELAESGLL 553
Query: 509 PEFSSFYMLAEGLVSLGKEETLVELIDMVMDKAKFSDRETS--MVRGFLKIRKFQDALAT 566
P+ S+F + G G+ E E + + + D T ++ G K + AL
Sbjct: 554 PDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNF 613
Query: 567 FGDILDSR 574
F +++ R
Sbjct: 614 FNTLIEER 621
Score = 226 bits (575), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 138/461 (29%), Positives = 229/461 (49%), Gaps = 38/461 (8%)
Query: 11 MVSR-GIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEG 69
MVS + PD T+N ++KA+ K ++ ++ +M GL P+ T+ L+ G + G
Sbjct: 230 MVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLG 289
Query: 70 NLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYN 129
+L A +I E M + L T N+L++G C G + + L + M S PD TYN
Sbjct: 290 SLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYN 349
Query: 130 TLVNGLCKVGHVKQALEVMDMMLQEG---------------------------------- 155
TL++G ++G +A ++M+ M +G
Sbjct: 350 TLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDM 409
Query: 156 --FDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEE 213
F PD+ TY++LI K+G++ A+E++ +M + NTIT NT++ LCKE +++E
Sbjct: 410 HGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDE 469
Query: 214 ATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLID 273
A L +G + D T+ +LI G + A+E++ EMK P T+N LI
Sbjct: 470 AHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIG 529
Query: 274 SLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISR 333
LC G E A++ E+ SG + T+N++I G+CK R+E+A E ++E
Sbjct: 530 GLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKP 589
Query: 334 NSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIV 393
++ T N L++GLCK E A + +I E + D TYN++++ +C+ +K A D++
Sbjct: 590 DNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLL 648
Query: 394 QNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMK 434
M G EPD TY + I L + G++ +LL+ K
Sbjct: 649 SEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGK 689
Score = 173 bits (438), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 109/346 (31%), Positives = 166/346 (47%), Gaps = 19/346 (5%)
Query: 14 RGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDG 73
G PD+ T++ LIKA K + A+ MM EM G+ + T T++ L +E LD
Sbjct: 410 HGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDE 469
Query: 74 ALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVN 133
A + + G +V VT L+ GF +E ++E AL EM P T+N+L+
Sbjct: 470 AHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIG 529
Query: 134 GLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSP 193
GLC G + A+E D + + G PD T+NS+I G CK G VE+A E N+ I P
Sbjct: 530 GLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKP 589
Query: 194 NTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELF 253
+ T N L++ LCKE E+A L + + D T+N++I C A +L
Sbjct: 590 DNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLL 648
Query: 254 QEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKL 313
EM+ KG +PD FTYN I L G L E +LLK+ F +
Sbjct: 649 SEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGK---------------FGSM 693
Query: 314 KR---IEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQ 356
KR +E + + ++ ++ Y+ +ID LC R+++ ++
Sbjct: 694 KRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKEHSR 739
Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 147/297 (49%), Gaps = 24/297 (8%)
Query: 10 DMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEG 69
+M +GIK + T N ++ ALCK ++ A ++ G DE T+ TL+ G E
Sbjct: 441 EMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREE 500
Query: 70 NLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYN 129
++ AL + ++M + T T N L+ G C G+ E A+ E+ G PD T+N
Sbjct: 501 KVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFN 560
Query: 130 TLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILR 189
+++ G CK G V++A E + ++ F PD +T N L++GLCK G E+A+ N +I
Sbjct: 561 SIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLI-E 619
Query: 190 DCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVA 249
+ +T+TYNT+IS CK+ +++EA +L + KG+ PD T+NS I L
Sbjct: 620 EREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSET 679
Query: 250 MELFQEMKTK-----------------------GCQPDEFTYNMLIDSLCSRGMLEE 283
EL ++ K + Y+ +ID LCSRG L+E
Sbjct: 680 DELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKE 736
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 280 bits (717), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 160/520 (30%), Positives = 253/520 (48%), Gaps = 44/520 (8%)
Query: 11 MVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGN 70
M++ G+ P + LI+ C+ +R ++ EM + T+ T+++G+ G+
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGD 432
Query: 71 LDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNT 130
LDGA I ++M+ GC V L+ F + R DA+ ++EM +G PD F YN+
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS 492
Query: 131 LVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRD 190
L+ GL K + +A + M++ G P+ FTY + ISG + E A + + +M R+
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM--RE 550
Query: 191 CS--PNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDV 248
C PN + LI+ CK+ +V EA R + +GIL D T+ L+ GL D
Sbjct: 551 CGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDD 610
Query: 249 AMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLID 308
A E+F+EM+ KG PD F+Y +LI+ G +++A + EM G NV+ YN L+
Sbjct: 611 AEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLG 670
Query: 309 GFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKP 368
GFC+ IE+A+E+ DEM ++G+ N+VTY T+IDG CKS + +A +L D+M ++GL P
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP 730
Query: 369 DKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGC--------------------------- 401
D F Y +L+ CR D++RA I GC
Sbjct: 731 DSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVFKFGKTELKTEVL 789
Query: 402 ------------EPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQA 449
+P+ VTY +I LCK G +E A +L +Q ++ T Y ++
Sbjct: 790 NRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNG 849
Query: 450 LFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGG 489
+ R E +F E + PD + Y + G
Sbjct: 850 YDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEG 889
Score = 277 bits (708), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 160/539 (29%), Positives = 269/539 (49%), Gaps = 6/539 (1%)
Query: 1 LKLVETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTT 60
LKL E+ M+ +G+ P T+++LI LCK ++ A ++ EM G++ D T++
Sbjct: 262 LKLKES----MICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
Query: 61 LMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEG 120
L+ GL++ N D A + +MV HG + + + KEG +E A + M++ G
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASG 377
Query: 121 FNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAV 180
P Y +L+ G C+ +V+Q E++ M + +TY +++ G+C G+++ A
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAY 437
Query: 181 EILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 240
I+ +MI C PN + Y TLI T + ++ +A + + + +GI PD+ +NSLI GL
Sbjct: 438 NIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGL 497
Query: 241 CLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNV 300
D A EM G +P+ FTY I A K +KEM G N
Sbjct: 498 SKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNK 557
Query: 301 VTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQ 360
V LI+ +CK ++ EA + M QGI ++ TY L++GL K+ +V+DA ++ +
Sbjct: 558 VLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFRE 617
Query: 361 MIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGR 420
M +G+ PD F+Y L+ + + G++++A+ I M G P+++ Y L+GG C++G
Sbjct: 618 MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE 677
Query: 421 VEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKH 480
+E A +LL + +KG+ Y +I + EA RLF EM K PD+ Y
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTT 737
Query: 481 VFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELIDMVMD 539
+ G C E + ++G + F L + GK E E+++ +MD
Sbjct: 738 LVDGCCRLNDV--ERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMD 794
Score = 245 bits (626), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 161/570 (28%), Positives = 272/570 (47%), Gaps = 17/570 (2%)
Query: 1 LKLVETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTT 60
L L + MV R + DV T+++LI A C+A + ++ L E+ F T
Sbjct: 202 LDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNV--------QLGKDVLFKTEKEFRT 253
Query: 61 LMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEG 120
N+DGAL+++E M+ G + T +VL+ G CK R+EDA S + EM S G
Sbjct: 254 ATL------NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLG 307
Query: 121 FNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAV 180
+ D TY+ L++GL K + A ++ M+ G + + Y+ I + K G +E+A
Sbjct: 308 VSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAK 367
Query: 181 EILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 240
+ + MI P Y +LI C+E V + EL + + I+ T+ ++++G+
Sbjct: 368 ALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGM 427
Query: 241 CLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNV 300
C + + D A + +EM GC+P+ Y LI + +A+++LKEM+ G A ++
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDI 487
Query: 301 VTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQ 360
YN+LI G K KR++EA EM G+ N+ TY I G ++ A + + +
Sbjct: 488 FCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547
Query: 361 MIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGR 420
M G+ P+K L+ YC+ G + A ++M G D TY L+ GL K +
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607
Query: 421 VEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKH 480
V+ A ++ R ++ KGI +Y +I + +A +F EM+E+ P+ + Y
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 481 VFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELIDMVMDK 540
+ G C G I +A + + EM +G P ++ + +G G L D + K
Sbjct: 668 LLGGFCR-SGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK 726
Query: 541 AKFSDR--ETSMVRGFLKIRKFQDALATFG 568
D T++V G ++ + A+ FG
Sbjct: 727 GLVPDSFVYTTLVDGCCRLNDVERAITIFG 756
Score = 243 bits (621), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 164/579 (28%), Positives = 267/579 (46%), Gaps = 24/579 (4%)
Query: 15 GIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGA 74
G D F IL I A+ + G L P L+ L+ LD
Sbjct: 146 GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205
Query: 75 LRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIE---------------------DALSFI 113
+ + MVE + T ++L+ C+ G ++ AL
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265
Query: 114 QEMVSEGFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKL 173
+ M+ +G P ++TY+ L++GLCK+ ++ A ++ M G D TY+ LI GL K
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325
Query: 174 GEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTF 233
+ A ++++M+ + Y+ I + KE +E+A L + + G++P +
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385
Query: 234 NSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMES 293
SLI+G C N EL EMK + +TY ++ +CS G L+ A ++KEM +
Sbjct: 386 ASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIA 445
Query: 294 SGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVED 353
SGC NVV Y TLI F + R +A + EM+ QGI+ + YN+LI GL K++R+++
Sbjct: 446 SGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDE 505
Query: 354 AAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIG 413
A + +M+ GLKP+ FTY + ++ Y A + A V+ M G P+ V LI
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565
Query: 414 GLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPP 473
CK G+V A RS+ +GI+ + Y ++ LF+ + +A +FREM K P
Sbjct: 566 EYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625
Query: 474 DALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVEL 533
D +Y + G G + +A EM+E G P + ML G G+ E EL
Sbjct: 626 DVFSYGVLINGFSKLGN-MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Query: 534 IDMVMDKAKFSDRET--SMVRGFLKIRKFQDALATFGDI 570
+D + K + T +++ G+ K +A F ++
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
Score = 241 bits (616), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 144/432 (33%), Positives = 213/432 (49%), Gaps = 5/432 (1%)
Query: 10 DMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEG 69
+M +GI PD+ +N LI L KA ++ A + EM GL P+ T+ + G IE
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEAS 536
Query: 70 NLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYN 129
A + ++M E G L V L++ +CK+G++ +A S + MV +G D TY
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYT 596
Query: 130 TLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILR 189
L+NGL K V A E+ M +G PDVF+Y LI+G KLG +++A I ++M+
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656
Query: 190 DCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVA 249
+PN I YN L+ C+ ++E+A EL ++ KG+ P+ T+ ++I G C + + A
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEA 716
Query: 250 MELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDG 309
LF EMK KG PD F Y L+D C +E A+ + GCA + +N LI+
Sbjct: 717 FRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINW 775
Query: 310 FCKLKRIEEAEEIFDEMEIQGISR----NSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 365
K + E E+ + + R N VTYN +ID LCK +E A +L QM
Sbjct: 776 VFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNAN 835
Query: 366 LKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVAS 425
L P TY SLL Y + G + + G EPD + Y +I K G A
Sbjct: 836 LMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKAL 895
Query: 426 KLLRSIQMKGIV 437
L+ + K V
Sbjct: 896 VLVDQMFAKNAV 907
Score = 220 bits (560), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 225/451 (49%), Gaps = 45/451 (9%)
Query: 10 DMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEG 69
+MV G+KP+ T+ I +A + A ++EM G+ P++ T L+ ++G
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKG 571
Query: 70 NLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYN 129
+ A MV+ G L T VL++G K +++DA +EM +G PD F+Y
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYG 631
Query: 130 TLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILR 189
L+NG K+G++++A + D M++EG P+V YN L+ G C+ GE+E+A E+L++M ++
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691
Query: 190 DCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVA 249
PN +TY T+I CK + EA L + KG++PD + +L+ G C ++ + A
Sbjct: 692 GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751
Query: 250 MELFQEMKTKGC---------------------------------------QPDEFTYNM 270
+ +F K KGC +P++ TYN+
Sbjct: 752 ITIFGTNK-KGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810
Query: 271 LIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQG 330
+ID LC G LE A +L +M+++ V+TY +L++G+ K+ R E +FDE G
Sbjct: 811 MIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAG 870
Query: 331 ISRNSVTYNTLIDGLCKSRRVEDAAQLMDQM-----IMEGLKPDKFTYNSLLTYYCRAGD 385
I + + Y+ +I+ K A L+DQM + +G K T +LL+ + + G+
Sbjct: 871 IEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGE 930
Query: 386 IKRAADIVQNMTSNGCEPDIVTYGTLIGGLC 416
++ A +++NM PD T LI C
Sbjct: 931 MEVAEKVMENMVRLQYIPDSATVIELINESC 961
Score = 192 bits (489), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 123/401 (30%), Positives = 197/401 (49%), Gaps = 47/401 (11%)
Query: 2 KLVE--TAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFT 59
K++E +A+ MV +GI D T+ +L+ L K ++ A + EM G G+APD ++
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYG 631
Query: 60 TLMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSE 119
L+ G + GN+ A I ++MVE G + N+L+ GFC+ G IE A + EM +
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691
Query: 120 GFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEA 179
G +P+ TY T+++G CK G + +A + D M +G PD F Y +L+ G C+L +VE A
Sbjct: 692 GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751
Query: 180 V----------------------------------EILNQMIL----RDCSPNTITYNTL 201
+ E+LN+++ R PN +TYN +
Sbjct: 752 ITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIM 811
Query: 202 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGC 261
I LCKE +E A EL + + ++P V T+ SL+ G +F E G
Sbjct: 812 IDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGI 871
Query: 262 QPDEFTYNMLIDSLCSRGMLEEALKLLKEMESS-----GCARNVVTYNTLIDGFCKLKRI 316
+PD Y+++I++ GM +AL L+ +M + GC ++ T L+ GF K+ +
Sbjct: 872 EPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEM 931
Query: 317 EEAEEIFDEMEIQGISRNSVTYNTLIDGLCKS--RRVEDAA 355
E AE++ + M +S T LI+ C S +RVE A
Sbjct: 932 EVAEKVMENMVRLQYIPDSATVIELINESCISSNQRVEADA 972
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 96/266 (36%), Gaps = 48/266 (18%)
Query: 267 TYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEM 326
+++ L LC+ G E+AL +++ M ++R E++ +
Sbjct: 99 SFSFLALDLCNFGSFEKALSVVERM---------------------IERNWPVAEVWSSI 137
Query: 327 -----EIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYC 381
E G S + V + L DG +E+A + + L P LL
Sbjct: 138 VRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALL 197
Query: 382 RAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEV------------------ 423
R + D+ + M D+ TY LI C+AG V++
Sbjct: 198 RWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLN 257
Query: 424 ---ASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKH 480
A KL S+ KG+V Y+ +I L + KR +A L EM D TY
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
Query: 481 VFRGLCNGGGPIGEAVDFVIEMLERG 506
+ GL G A V EM+ G
Sbjct: 318 LIDGLLKGRNA-DAAKGLVHEMVSHG 342
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 280 bits (716), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 169/534 (31%), Positives = 270/534 (50%), Gaps = 38/534 (7%)
Query: 9 ADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEE 68
A M+ RG +V NIL+K LC+ + A+ ++ EM L PD ++ T+++G E
Sbjct: 131 ALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEG 190
Query: 69 GNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTY 128
L+ AL + +M GC + VT +L+ FCK G++++A+ F++EM G D Y
Sbjct: 191 KELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVY 250
Query: 129 NTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMIL 188
+L+ G C G + + + D +L+ G P TYN+LI G CKLG+++EA EI MI
Sbjct: 251 TSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIE 310
Query: 189 RDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDV 248
R PN TY LI LC + +EA +L ++ K P+ T+N +I LC
Sbjct: 311 RGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVAD 370
Query: 249 AMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEM--ESSGCARNVVTYNTL 306
A+E+ + MK + +PD TYN+L+ LC++G L+EA KLL M +SS +V++YN L
Sbjct: 371 AVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNAL 430
Query: 307 IDGFCKLKRIEEAEEIFD-----------------------------EMEI------QGI 331
I G CK R+ +A +I+D ME+ I
Sbjct: 431 IHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKI 490
Query: 332 SRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAAD 391
RNS TY +IDG CK+ + A L+ +M + L+P F YN LL+ C+ G + +A
Sbjct: 491 VRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWR 550
Query: 392 IVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALF 451
+ + M + PD+V++ +I G KAG ++ A LL + G+ Y+ +I
Sbjct: 551 LFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFL 610
Query: 452 RRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLER 505
+ EA+ F +M++ PDA V + C G + + V +++++
Sbjct: 611 KLGYLDEAISFFDKMVDSGFEPDAHICDSVLK-YCISQGETDKLTELVKKLVDK 663
Score = 225 bits (574), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 130/423 (30%), Positives = 229/423 (54%), Gaps = 3/423 (0%)
Query: 10 DMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEG 69
+++ RG P T+N LI+ CK Q++ A + E M G+ P+ T+T L+ GL G
Sbjct: 272 EVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVG 331
Query: 70 NLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYN 129
AL++ M+E VT N++++ CK+G + DA+ ++ M PD TYN
Sbjct: 332 KTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYN 391
Query: 130 TLVNGLCKVGHVKQALEVMDMMLQEG--FDPDVFTYNSLISGLCKLGEVEEAVEILNQMI 187
L+ GLC G + +A +++ +ML++ DPDV +YN+LI GLCK + +A++I + ++
Sbjct: 392 ILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLV 451
Query: 188 LRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFD 247
+ + + +T N L+++ K V +A EL + ++ I+ + T+ ++I G C T +
Sbjct: 452 EKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLN 511
Query: 248 VAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLI 307
VA L +M+ QP F YN L+ SLC G L++A +L +EM+ +VV++N +I
Sbjct: 512 VAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMI 571
Query: 308 DGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLK 367
DG K I+ AE + M G+S + TY+ LI+ K +++A D+M+ G +
Sbjct: 572 DGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFE 631
Query: 368 PDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCK-AGRVEVASK 426
PD +S+L Y G+ + ++V+ + D T++ +C + +++A +
Sbjct: 632 PDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKR 691
Query: 427 LLR 429
LLR
Sbjct: 692 LLR 694
Score = 213 bits (542), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 145/474 (30%), Positives = 235/474 (49%), Gaps = 14/474 (2%)
Query: 60 TLMQGLIEEGN--LDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMV 117
T ++ L E+ N L A+ + +Q V+ G + N L+ + E A SF ++M+
Sbjct: 41 TKLRSLCEDSNPQLKNAVSVFQQAVDSGSSLA-FAGNNLMAKLVRSRNHELAFSFYRKML 99
Query: 118 SEGFNPDQFTYNTLVNGL--CKVGHVKQ--ALEVMDMMLQEGFDPDVFTYNSLISGLCKL 173
D F ++GL C V K A V+ +ML+ GF +V+ +N L+ GLC+
Sbjct: 100 E----TDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRN 155
Query: 174 GEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTF 233
E +AV +L +M P+ +YNT+I C+ ++E+A ELA + G + T+
Sbjct: 156 LECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTW 215
Query: 234 NSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMES 293
LI C D AM +EMK G + D Y LI C G L+ L E+
Sbjct: 216 GILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLE 275
Query: 294 SGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVED 353
G + +TYNTLI GFCKL +++EA EIF+ M +G+ N TY LIDGLC + ++
Sbjct: 276 RGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKE 335
Query: 354 AAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIG 413
A QL++ MI + +P+ TYN ++ C+ G + A +IV+ M PD +TY L+G
Sbjct: 336 ALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLG 395
Query: 414 GLCKAGRVEVASKLLRSIQMKGIVLTPQ--AYNPVIQALFRRKRTTEAMRLFREMMEKAD 471
GLC G ++ ASKLL + P +YN +I L + R +A+ ++ ++EK
Sbjct: 396 GLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLG 455
Query: 472 PPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLG 525
D +T + G + +A++ ++ + + ++ + +G G
Sbjct: 456 AGDRVTTNILLNSTLK-AGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTG 508
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 152/338 (44%), Gaps = 39/338 (11%)
Query: 237 IQGLCLTSN--FDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESS 294
++ LC SN A+ +FQ+ G F N L+ L E A ++M +
Sbjct: 43 LRSLCEDSNPQLKNAVSVFQQAVDSGSSL-AFAGNNLMAKLVRSRNHELAFSFYRKMLET 101
Query: 295 GCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDA 354
N V+ + L++ + ++++ A + M +G + N +N L+ GLC++ A
Sbjct: 102 DTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKA 161
Query: 355 AQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGG 414
L+ +M L PD F+YN+++ +C ++++A ++ M +GC +VT+G LI
Sbjct: 162 VSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDA 221
Query: 415 LCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPD 474
CKAG+++ A L+ ++ G+ Y +I+ LF E++E+ D P
Sbjct: 222 FCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPC 281
Query: 475 ALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGK-EETL--- 530
A+TY + RG C G + EA + M+ERG P ++ L +GL +GK +E L
Sbjct: 282 AITYNTLIRGFCKLG-QLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLL 340
Query: 531 -------------------------------VELIDMV 537
VE+++++
Sbjct: 341 NLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELM 378
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 101/242 (41%), Gaps = 16/242 (6%)
Query: 340 TLIDGLCKSR--RVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMT 397
T + LC+ ++++A + Q + G F N+L+ R+ + + A + M
Sbjct: 41 TKLRSLCEDSNPQLKNAVSVFQQAVDSG-SSLAFAGNNLMAKLVRSRNHELAFSFYRKML 99
Query: 398 SNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTT 457
+ V+ L+ + + A +L + +G +N +++ L R
Sbjct: 100 ETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECG 159
Query: 458 EAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYML 517
+A+ L REM + PD +Y V RG C G + +A++ EM G ++ +L
Sbjct: 160 KAVSLLREMRRNSLMPDVFSYNTVIRGFCEGK-ELEKALELANEMKGSGCSWSLVTWGIL 218
Query: 518 AEGLVSLGK-EETLVELIDMVMDKAKFSDRE------TSMVRGFLKIRKFQDALATFGDI 570
+ GK +E + L +M KF E TS++RGF + A F ++
Sbjct: 219 IDAFCKAGKMDEAMGFLKEM-----KFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV 273
Query: 571 LD 572
L+
Sbjct: 274 LE 275
Score = 36.2 bits (82), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 39/83 (46%)
Query: 1 LKLVETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTT 60
+K E+ M G+ PD+ T++ LI K + AI ++M G PD +
Sbjct: 580 IKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDS 639
Query: 61 LMQGLIEEGNLDGALRIREQMVE 83
+++ I +G D + +++V+
Sbjct: 640 VLKYCISQGETDKLTELVKKLVD 662
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 280 bits (716), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 161/556 (28%), Positives = 283/556 (50%), Gaps = 38/556 (6%)
Query: 4 VETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQ 63
VE+ A + G+ P++ T+N+LIK CK + A ++ M G PD +++T++
Sbjct: 133 VESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVIN 192
Query: 64 GLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSE-GFN 122
L + G LD AL + ++M E G N+L+ GF KE + A+ ++ +
Sbjct: 193 DLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVY 252
Query: 123 PDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEI 182
P+ T+N +++GL K G V L++ + M Q + D++TY+SLI GLC G V++A +
Sbjct: 253 PNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESV 312
Query: 183 LNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 242
N++ R S + +TYNT++ C+ +++E+ EL R++ K + ++ ++N LI+GL
Sbjct: 313 FNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLE 371
Query: 243 TSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVT 302
D A +++ M KG D+ TY + I LC G + +AL +++E+ESSG +V
Sbjct: 372 NGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYA 431
Query: 303 YNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNS--------------------------- 335
Y ++ID CK KR+EEA + EM G+ NS
Sbjct: 432 YASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMG 491
Query: 336 --------VTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIK 387
V+YN LI GLCK+ + +A+ + +M+ G KPD TY+ LL CR I
Sbjct: 492 KNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKID 551
Query: 388 RAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVI 447
A ++ +G E D++ + LI GLC G+++ A ++ +++ + YN ++
Sbjct: 552 LALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLM 611
Query: 448 QALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGF 507
+ F+ + A ++ M + PD ++Y + +GLC G + A++F + G
Sbjct: 612 EGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRG-VSYAMEFFDDARNHGI 670
Query: 508 LPEFSSFYMLAEGLVS 523
P ++ +L +V+
Sbjct: 671 FPTVYTWNILVRAVVN 686
Score = 259 bits (661), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 157/503 (31%), Positives = 261/503 (51%), Gaps = 6/503 (1%)
Query: 72 DGALRIREQMVE-HGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNT 130
D AL + ++M E GC + N L++ F + + S + G P+ TYN
Sbjct: 95 DQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNV 154
Query: 131 LVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRD 190
L+ CK ++A +D M +EGF PDVF+Y+++I+ L K G++++A+E+ ++M R
Sbjct: 155 LIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERG 214
Query: 191 CSPNTITYNTLISTLCKENQVEEATELA-RVLTSKGILPDVCTFNSLIQGLCLTSNFDVA 249
+P+ YN LI KE + A EL R+L + P+V T N +I GL D
Sbjct: 215 VAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDC 274
Query: 250 MELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDG 309
+++++ MK + D +TY+ LI LC G +++A + E++ + +VVTYNT++ G
Sbjct: 275 LKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGG 334
Query: 310 FCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPD 369
FC+ +I+E+ E++ ME + S N V+YN LI GL ++ ++++A + M +G D
Sbjct: 335 FCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAAD 393
Query: 370 KFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLR 429
K TY + C G + +A ++Q + S+G D+ Y ++I LCK R+E AS L++
Sbjct: 394 KTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVK 453
Query: 430 SIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGG 489
+ G+ L N +I L R R EA REM + P ++Y + GLC
Sbjct: 454 EMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCK-A 512
Query: 490 GPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELIDMVMDKAKFSD--RE 547
G GEA FV EMLE G+ P+ ++ +L GL K + +EL + +D
Sbjct: 513 GKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMH 572
Query: 548 TSMVRGFLKIRKFQDALATFGDI 570
++ G + K DA+ ++
Sbjct: 573 NILIHGLCSVGKLDDAMTVMANM 595
Score = 244 bits (624), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 148/514 (28%), Positives = 249/514 (48%), Gaps = 72/514 (14%)
Query: 11 MVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGN 70
M G KPDV +++ +I L KA ++ A+ + +EM G+APD + L+ G ++E +
Sbjct: 175 MWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKD 234
Query: 71 LDGALRIREQMVEHGCLVTNV-TVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYN 129
A+ + ++++E + NV T N+++ G K GR++D L + M D +TY+
Sbjct: 235 HKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYS 294
Query: 130 TLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILR 189
+L++GLC G+V +A V + + + DV TYN+++ G C+ G+++E++E+ M +
Sbjct: 295 SLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHK 354
Query: 190 DCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVA 249
+ S N ++YN LI L + +++EAT + R++ +KG D T+ I GLC+ + A
Sbjct: 355 N-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKA 413
Query: 250 MELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMES---------------- 293
+ + QE+++ G D + Y +ID LC + LEEA L+KEM
Sbjct: 414 LGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGG 473
Query: 294 -------------------SGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRN 334
+GC VV+YN LI G CK + EA EM G +
Sbjct: 474 LIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPD 533
Query: 335 SVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKF----------------------- 371
TY+ L+ GLC+ R+++ A +L Q + GL+ D
Sbjct: 534 LKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMA 593
Query: 372 ------------TYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAG 419
TYN+L+ + + GD RA I M G +PDI++Y T++ GLC
Sbjct: 594 NMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCR 653
Query: 420 RVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRR 453
V A + + GI T +N +++A+ R
Sbjct: 654 GVSYAMEFFDDARNHGIFPTVYTWNILVRAVVNR 687
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 186/372 (50%), Gaps = 3/372 (0%)
Query: 120 GFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEA 179
G+ Y+ ++ L + V +++++ + D S+I K ++A
Sbjct: 38 GYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQA 97
Query: 180 VEILNQMI-LRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ 238
+++ +M + C P +YNTL++ + Q + L + G+ P++ T+N LI+
Sbjct: 98 LDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIK 157
Query: 239 GLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCAR 298
C F+ A M +G +PD F+Y+ +I+ L G L++AL+L EM G A
Sbjct: 158 MSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAP 217
Query: 299 NVVTYNTLIDGFCKLKRIEEAEEIFDE-MEIQGISRNSVTYNTLIDGLCKSRRVEDAAQL 357
+V YN LIDGF K K + A E++D +E + N T+N +I GL K RV+D ++
Sbjct: 218 DVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKI 277
Query: 358 MDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCK 417
++M + D +TY+SL+ C AG++ +A + + D+VTY T++GG C+
Sbjct: 278 WERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCR 337
Query: 418 AGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALT 477
G+++ + +L R ++ K V +YN +I+ L + EA ++R M K D T
Sbjct: 338 CGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTT 396
Query: 478 YKHVFRGLCNGG 489
Y GLC G
Sbjct: 397 YGIFIHGLCVNG 408
Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 172/375 (45%), Gaps = 5/375 (1%)
Query: 193 PNTITYNTLISTLCKENQVEEATELARVLTSK-GILPDVCTFNSLIQGLCLTSNFDVAME 251
P +++ ++ L E A L T G ++ +++ L T +
Sbjct: 5 PKSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSR 64
Query: 252 LFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEM-ESSGCARNVVTYNTLIDGF 310
+ + ++++ C+ DE +I + M ++AL + K M E GC + +YNTL++ F
Sbjct: 65 IVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAF 124
Query: 311 CKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDK 370
+ K+ + E +F E G++ N TYN LI CK + E A +D M EG KPD
Sbjct: 125 VEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDV 184
Query: 371 FTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLL-R 429
F+Y++++ +AG + A ++ M+ G PD+ Y LI G K + A +L R
Sbjct: 185 FSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDR 244
Query: 430 SIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGG 489
++ + + +N +I L + R + ++++ M + D TY + GLC+ G
Sbjct: 245 LLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAG 304
Query: 490 GPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELIDMVMDKAKFSDRETS 549
+ +A E+ ER + ++ + G GK + +EL ++ K + +
Sbjct: 305 N-VDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYN 363
Query: 550 -MVRGFLKIRKFQDA 563
+++G L+ K +A
Sbjct: 364 ILIKGLLENGKIDEA 378
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 280 bits (716), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 162/491 (32%), Positives = 257/491 (52%), Gaps = 30/491 (6%)
Query: 16 IKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGAL 75
I P+ +FN++IKALCK + AI + MP PD T+ TLM GL +E +D A+
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 76 RIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGL 135
+ ++M GC + V NVL+ G CK+G + + M +G P++ TYNTL++GL
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 136 CKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNT 195
C G + +A+ +++ M+ P+ TY +LI+GL K +AV +L+ M R N
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQ 362
Query: 196 ITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQE 255
Y+ LIS L KE + EEA L R + KG P++ ++ L+ GLC + A E+
Sbjct: 363 HIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNR 422
Query: 256 MKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKR 315
M GC P+ +TY+ L+ G+ EEA+++ KEM+ +GC+RN Y+ LIDG C + R
Sbjct: 423 MIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGR 482
Query: 316 IEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME---GLKPDKFT 372
++EA ++ +M GI ++V Y+++I GLC ++ A +L +M+ + +PD T
Sbjct: 483 VKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVT 542
Query: 373 YNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGL------CKAGRVEVASK 426
YN LL C DI RA D++ +M GC+PD++T T + L C GR +
Sbjct: 543 YNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEEL 602
Query: 427 LLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLC 486
++R L +R+R + A + M+ K P T+ + R +C
Sbjct: 603 VVR--------------------LLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREIC 642
Query: 487 NGGGPIGEAVD 497
I A+D
Sbjct: 643 K-PKKINAAID 652
Score = 253 bits (645), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 150/464 (32%), Positives = 244/464 (52%), Gaps = 9/464 (1%)
Query: 55 ERTFTTLMQGLIEEGNLDGALRIREQMV-EHGCLVTNVTVNVLVHGFCKEGRIEDALSFI 113
ER+F + + + D A+ + +MV E C + + N +++ EG L F
Sbjct: 112 ERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFY 171
Query: 114 QEMVSEGFN----PDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISG 169
+V+ N P+ ++N ++ LCK+ V +A+EV M + PD +TY +L+ G
Sbjct: 172 DYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDG 231
Query: 170 LCKLGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPD 229
LCK ++EAV +L++M CSP+ + YN LI LCK+ + T+L + KG +P+
Sbjct: 232 LCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPN 291
Query: 230 VCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLK 289
T+N+LI GLCL D A+ L + M + C P++ TY LI+ L + +A++LL
Sbjct: 292 EVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLS 351
Query: 290 EMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSR 349
ME G N Y+ LI G K + EEA ++ +M +G N V Y+ L+DGLC+
Sbjct: 352 SMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREG 411
Query: 350 RVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYG 409
+ +A +++++MI G P+ +TY+SL+ + + G + A + + M GC + Y
Sbjct: 412 KPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYS 471
Query: 410 TLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEK 469
LI GLC GRV+ A + + GI AY+ +I+ L A++L+ EM+ +
Sbjct: 472 VLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQ 531
Query: 470 ADP---PDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPE 510
+P PD +TY + GLC I AVD + ML+RG P+
Sbjct: 532 EEPKSQPDVVTYNILLDGLCMQKD-ISRAVDLLNSMLDRGCDPD 574
Score = 247 bits (631), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/438 (31%), Positives = 233/438 (53%), Gaps = 24/438 (5%)
Query: 11 MVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGN 70
M R PD T+ L+ LCK +I A+L+++EM G +P + L+ GL ++G+
Sbjct: 213 MPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGD 272
Query: 71 LDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNT 130
L ++ + M GC+ VT N L+HG C +G+++ A+S ++ MVS P+ TY T
Sbjct: 273 LTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGT 332
Query: 131 LVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRD 190
L+NGL K A+ ++ M + G+ + Y+ LISGL K G+ EEA+ + +M +
Sbjct: 333 LINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKG 392
Query: 191 CSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAM 250
C PN + Y+ L+ LC+E + EA E+ + + G LP+ T++SL++G T + A+
Sbjct: 393 CKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAV 452
Query: 251 ELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGF 310
++++EM GC ++F Y++LID LC G ++EA+ + +M + G + V Y+++I G
Sbjct: 453 QVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGL 512
Query: 311 CKLKRIEEAEEIFDEMEIQGISRNS---VTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLK 367
C + ++ A +++ EM Q ++ VTYN L+DGLC + + A L++ M+ G
Sbjct: 513 CGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCD 572
Query: 368 PDKFTYNSLL------TYYCRAGD----------IKR-----AADIVQNMTSNGCEPDIV 406
PD T N+ L + C G +KR A IV+ M P
Sbjct: 573 PDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTS 632
Query: 407 TYGTLIGGLCKAGRVEVA 424
T+ ++ +CK ++ A
Sbjct: 633 TWAMIVREICKPKKINAA 650
Score = 237 bits (604), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 149/496 (30%), Positives = 247/496 (49%), Gaps = 11/496 (2%)
Query: 55 ERTFTTLMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQ 114
+ T +++++ G+ D ++ ++ ++ + V+ + K + A+
Sbjct: 77 DSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFH 136
Query: 115 EMVSEGFNPDQF--TYNTLVNGLCKVGHVKQALEVMDMMLQEGFD----PDVFTYNSLIS 168
MV E F + ++N+++N + G + LE D ++ + P+ ++N +I
Sbjct: 137 RMVDE-FRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIK 195
Query: 169 GLCKLGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILP 228
LCKL V+ A+E+ M R C P+ TY TL+ LCKE +++EA L + S+G P
Sbjct: 196 ALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSP 255
Query: 229 DVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLL 288
+N LI GLC + +L M KGC P+E TYN LI LC +G L++A+ LL
Sbjct: 256 SPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLL 315
Query: 289 KEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKS 348
+ M SS C N VTY TLI+G K +R +A + ME +G N Y+ LI GL K
Sbjct: 316 ERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKE 375
Query: 349 RRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTY 408
+ E+A L +M +G KP+ Y+ L+ CR G A +I+ M ++GC P+ TY
Sbjct: 376 GKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTY 435
Query: 409 GTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMME 468
+L+ G K G E A ++ + + G Y+ +I L R EAM ++ +M+
Sbjct: 436 SSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLT 495
Query: 469 KADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEML---ERGFLPEFSSFYMLAEGLVSLG 525
PD + Y + +GLC G G + A+ EML E P+ ++ +L +GL
Sbjct: 496 IGIKPDTVAYSSIIKGLC-GIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQK 554
Query: 526 KEETLVELIDMVMDKA 541
V+L++ ++D+
Sbjct: 555 DISRAVDLLNSMLDRG 570
Score = 236 bits (603), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 143/495 (28%), Positives = 247/495 (49%), Gaps = 14/495 (2%)
Query: 22 TFNILIKALCKAHQIRPAILMMEEMPG-YGLAPDERTFTTLMQGLIEEGNLDGALRIREQ 80
+F ++ +A KAH A+ + M + ++F +++ +I EG L +
Sbjct: 114 SFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDY 173
Query: 81 MVEHGCLVT----NVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGLC 136
+V + ++ N+++ CK ++ A+ + M PD +TY TL++GLC
Sbjct: 174 VVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLC 233
Query: 137 KVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTI 196
K + +A+ ++D M EG P YN LI GLCK G++ ++++ M L+ C PN +
Sbjct: 234 KEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEV 293
Query: 197 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEM 256
TYNTLI LC + ++++A L + S +P+ T+ +LI GL A+ L M
Sbjct: 294 TYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSM 353
Query: 257 KTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRI 316
+ +G ++ Y++LI L G EEA+ L ++M GC N+V Y+ L+DG C+ +
Sbjct: 354 EERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKP 413
Query: 317 EEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSL 376
EA+EI + M G N+ TY++L+ G K+ E+A Q+ +M G +KF Y+ L
Sbjct: 414 NEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVL 473
Query: 377 LTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSI----- 431
+ C G +K A + M + G +PD V Y ++I GLC G ++ A KL +
Sbjct: 474 IDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEE 533
Query: 432 -QMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGG 490
+ + V+T YN ++ L +K + A+ L M+++ PD +T L
Sbjct: 534 PKSQPDVVT---YNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSN 590
Query: 491 PIGEAVDFVIEMLER 505
+ F+ E++ R
Sbjct: 591 SCDKGRSFLEELVVR 605
Score = 146 bits (368), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 151/314 (48%), Gaps = 17/314 (5%)
Query: 9 ADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEE 68
+ M RG + +++LI L K + A+ + +M G P+ ++ L+ GL E
Sbjct: 351 SSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCRE 410
Query: 69 GNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTY 128
G + A I +M+ GCL T + L+ GF K G E+A+ +EM G + ++F Y
Sbjct: 411 GKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCY 470
Query: 129 NTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMIL 188
+ L++GLC VG VK+A+ V ML G PD Y+S+I GLC +G ++ A+++ ++M+
Sbjct: 471 SVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLC 530
Query: 189 RD---CSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSN 245
++ P+ +TYN L+ LC + + A +L + +G PDV T N+ + L SN
Sbjct: 531 QEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSN 590
Query: 246 FDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNT 305
C L+ L R + A +++ M A T+
Sbjct: 591 --------------SCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAM 636
Query: 306 LIDGFCKLKRIEEA 319
++ CK K+I A
Sbjct: 637 IVREICKPKKINAA 650
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 118/265 (44%), Gaps = 59/265 (22%)
Query: 11 MVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGN 70
M +G KP++ +++L+ LC+ + A ++ M G P+ T+++LM+G + G
Sbjct: 388 MAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGL 447
Query: 71 LDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNT 130
+ A+++ ++M + GC +VL+ G C GR+++A+ +M++ G PD Y++
Sbjct: 448 CEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSS 507
Query: 131 LVNGLCKVGH--------------------------------------VKQALEVMDMML 152
++ GLC +G + +A+++++ ML
Sbjct: 508 IIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSML 567
Query: 153 QEGFDPDVFTYNSLISGL------CKLGE---------------VEEAVEILNQMILRDC 191
G DPDV T N+ ++ L C G V A I+ M+ +
Sbjct: 568 DRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYL 627
Query: 192 SPNTITYNTLISTLCKENQVEEATE 216
+P T T+ ++ +CK ++ A +
Sbjct: 628 APKTSTWAMIVREICKPKKINAAID 652
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 278 bits (711), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 172/559 (30%), Positives = 283/559 (50%), Gaps = 24/559 (4%)
Query: 12 VSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNL 71
+ RG ++F ILI AL KA+ PA +++ + L P + F L
Sbjct: 96 LHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSD-VFNVLFS-------- 146
Query: 72 DGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSE-GFNPDQFTYNT 130
E L ++ + ++L+ + + R+ D + + M+++ P+ T +
Sbjct: 147 ---------CYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSA 197
Query: 131 LVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRD 190
L++GL K H A+E+ + M+ G PDV+ Y +I LC+L ++ A E++ M
Sbjct: 198 LLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATG 257
Query: 191 CSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAM 250
C N + YN LI LCK+ +V EA + + L K + PDV T+ +L+ GLC F++ +
Sbjct: 258 CDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGL 317
Query: 251 ELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGF 310
E+ EM P E + L++ L RG +EEAL L+K + G + N+ YN LID
Sbjct: 318 EMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSL 377
Query: 311 CKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDK 370
CK ++ EAE +FD M G+ N VTY+ LID C+ +++ A + +M+ GLK
Sbjct: 378 CKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSV 437
Query: 371 FTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRS 430
+ YNSL+ +C+ GDI A + M + EP +VTY +L+GG C G++ A +L
Sbjct: 438 YPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHE 497
Query: 431 IQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGG 490
+ KGI + + ++ LFR +A++LF EM E P+ +TY + G C G
Sbjct: 498 MTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCE-EG 556
Query: 491 PIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELIDMVMDKAKFSDRE--- 547
+ +A +F+ EM E+G +P+ S+ L GL G+ +D + K E
Sbjct: 557 DMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDG-LHKGNCELNEICY 615
Query: 548 TSMVRGFLKIRKFQDALAT 566
T ++ GF + K ++AL+
Sbjct: 616 TGLLHGFCREGKLEEALSV 634
Score = 256 bits (655), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 143/464 (30%), Positives = 230/464 (49%), Gaps = 35/464 (7%)
Query: 9 ADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEE 68
+MV G+K V +N LI CK I A M EM L P T+T+LM G +
Sbjct: 426 GEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSK 485
Query: 69 GNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTY 128
G ++ ALR+ +M G + T L+ G + G I DA+ EM P++ TY
Sbjct: 486 GKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTY 545
Query: 129 NTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMIL 188
N ++ G C+ G + +A E + M ++G PD ++Y LI GLC G+ EA ++ +
Sbjct: 546 NVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605
Query: 189 RDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDV 248
+C N I Y L+ C+E ++EEA + + + +G+ D+ + LI G + +
Sbjct: 606 GNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKL 665
Query: 249 AMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLID 308
L +EM +G +PD+ Y +ID+ G +EA + M + GC N VTY +I+
Sbjct: 666 FFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN 725
Query: 309 GFCKLKRIEEAEEIFDEME-----------------------------------IQGISR 333
G CK + EAE + +M+ ++G+
Sbjct: 726 GLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLA 785
Query: 334 NSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIV 393
N+ TYN LI G C+ R+E+A++L+ +MI +G+ PD TY +++ CR D+K+A ++
Sbjct: 786 NTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELW 845
Query: 394 QNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIV 437
+MT G PD V Y TLI G C AG + A++L + +G++
Sbjct: 846 NSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLI 889
Score = 254 bits (650), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 181/680 (26%), Positives = 286/680 (42%), Gaps = 141/680 (20%)
Query: 10 DMVSRGIKPDVST-----------------------------------FNILIKALCKAH 34
DMVS GI+PDV +N+LI LCK
Sbjct: 217 DMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQ 276
Query: 35 QIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVN 94
++ A+ + +++ G L PD T+ TL+ GL + + L + ++M+ + V+
Sbjct: 277 KVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVS 336
Query: 95 VLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCK----------------- 137
LV G K G+IE+AL+ ++ +V G +P+ F YN L++ LCK
Sbjct: 337 SLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKI 396
Query: 138 ------------------VGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEA 179
G + AL + M+ G V+ YNSLI+G CK G++ A
Sbjct: 397 GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA 456
Query: 180 VEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 239
+ +MI + P +TY +L+ C + ++ +A L +T KGI P + TF +L+ G
Sbjct: 457 EGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSG 516
Query: 240 LCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSG---- 295
L A++LF EM +P+ TYN++I+ C G + +A + LKEM G
Sbjct: 517 LFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPD 576
Query: 296 -------------------------------CARNVVTYNTLIDGFCKLKRIEEAEEIFD 324
C N + Y L+ GFC+ ++EEA +
Sbjct: 577 TYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQ 636
Query: 325 EMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAG 384
EM +G+ + V Y LIDG K + + L+ +M GLKPD Y S++ + G
Sbjct: 637 EMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTG 696
Query: 385 DIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQ------------ 432
D K A I M + GC P+ VTY +I GLCKAG V A L +Q
Sbjct: 697 DFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYG 756
Query: 433 -----------------------MKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEK 469
+KG++ YN +I+ R+ R EA L M+
Sbjct: 757 CFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGD 816
Query: 470 ADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEET 529
PD +TY + LC + +A++ M E+G P+ ++ L G G+
Sbjct: 817 GVSPDCITYTTMINELCR-RNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGK 875
Query: 530 LVELIDMVMDKAKFSDRETS 549
EL + ++ + + +TS
Sbjct: 876 ATELRNEMLRQGLIPNNKTS 895
Score = 254 bits (648), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 154/501 (30%), Positives = 248/501 (49%), Gaps = 17/501 (3%)
Query: 18 PDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGALRI 77
P+V T + L+ L K A+ + +M G+ PD +T +++ L E +L A +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 78 REQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCK 137
M GC V V NVL+ G CK+ ++ +A+ +++ + PD TY TLV GLCK
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 138 VGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTIT 197
V + LE+MD ML F P +SL+ GL K G++EEA+ ++ +++ SPN
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369
Query: 198 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMK 257
YN LI +LCK + EA L + G+ P+ T++ LI C D A+ EM
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 258 TKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIE 317
G + + YN LI+ C G + A + EM + VVTY +L+ G+C +I
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489
Query: 318 EAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLL 377
+A ++ EM +GI+ + T+ TL+ GL ++ + DA +L ++M +KP++ TYN ++
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI 549
Query: 378 TYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIV 437
YC GD+ +A + ++ MT G PD +Y LI GLC G+ A + +
Sbjct: 550 EGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCE 609
Query: 438 LTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTY--------KHVFRGLCNGG 489
L Y ++ R + EA+ + +EM+++ D + Y KH R L G
Sbjct: 610 LNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFG- 668
Query: 490 GPIGEAVDFVIEMLERGFLPE 510
+ EM +RG P+
Sbjct: 669 --------LLKEMHDRGLKPD 681
Score = 246 bits (629), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 161/561 (28%), Positives = 280/561 (49%), Gaps = 11/561 (1%)
Query: 9 ADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEE 68
A M + G ++ +N+LI LCK ++ A+ + +++ G L PD T+ TL+ GL +
Sbjct: 251 AHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKV 310
Query: 69 GNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTY 128
+ L + ++M+ + V+ LV G K G+IE+AL+ ++ +V G +P+ F Y
Sbjct: 311 QEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVY 370
Query: 129 NTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMIL 188
N L++ LCK +A + D M + G P+ TY+ LI C+ G+++ A+ L +M+
Sbjct: 371 NALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD 430
Query: 189 RDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDV 248
+ YN+LI+ CK + A + +K + P V T+ SL+ G C +
Sbjct: 431 TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490
Query: 249 AMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLID 308
A+ L+ EM KG P +T+ L+ L G++ +A+KL EM N VTYN +I+
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE 550
Query: 309 GFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKP 368
G+C+ + +A E EM +GI ++ +Y LI GLC + + +A +D + +
Sbjct: 551 GYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCEL 610
Query: 369 DKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLL 428
++ Y LL +CR G ++ A + Q M G + D+V YG LI G K ++ LL
Sbjct: 611 NEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLL 670
Query: 429 RSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNG 488
+ + +G+ Y +I A + EA ++ M+ + P+ +TY V GLC
Sbjct: 671 KEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKA 730
Query: 489 GGPIGEAVDFVIEMLERGFLPE---FSSFY-MLAEGLVSLGKEETLVELIDMVMDKAKFS 544
G + EA +M +P + F +L +G V + K VEL + ++ K +
Sbjct: 731 GF-VNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKA---VELHNAIL-KGLLA 785
Query: 545 DRETS--MVRGFLKIRKFQDA 563
+ T ++RGF + + ++A
Sbjct: 786 NTATYNMLIRGFCRQGRIEEA 806
Score = 237 bits (604), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 130/431 (30%), Positives = 217/431 (50%), Gaps = 35/431 (8%)
Query: 9 ADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEE 68
A+M+++ ++P V T+ L+ C +I A+ + EM G G+AP TFTTL+ GL
Sbjct: 461 AEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRA 520
Query: 69 GNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTY 128
G + A+++ +M E VT NV++ G+C+EG + A F++EM +G PD ++Y
Sbjct: 521 GLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSY 580
Query: 129 NTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMIL 188
L++GLC G +A +D + + + + Y L+ G C+ G++EEA+ + +M+
Sbjct: 581 RPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQ 640
Query: 189 RDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDV 248
R + + Y LI K + L + + +G+ PD + S+I T +F
Sbjct: 641 RGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKE 700
Query: 249 AMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEME---------SSGC--- 296
A ++ M +GC P+E TY +I+ LC G + EA L +M+ + GC
Sbjct: 701 AFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLD 760
Query: 297 -----------------------ARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISR 333
N TYN LI GFC+ RIEEA E+ M G+S
Sbjct: 761 ILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSP 820
Query: 334 NSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIV 393
+ +TY T+I+ LC+ V+ A +L + M +G++PD+ YN+L+ C AG++ +A ++
Sbjct: 821 DCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELR 880
Query: 394 QNMTSNGCEPD 404
M G P+
Sbjct: 881 NEMLRQGLIPN 891
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 110/195 (56%), Gaps = 2/195 (1%)
Query: 11 MVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIE-EG 69
M++ G P+ T+ +I LCKA + A ++ +M P++ T+ + L + E
Sbjct: 708 MINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEV 767
Query: 70 NLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYN 129
++ A+ + +++ G L T N+L+ GFC++GRIE+A I M+ +G +PD TY
Sbjct: 768 DMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYT 826
Query: 130 TLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILR 189
T++N LC+ VK+A+E+ + M ++G PD YN+LI G C GE+ +A E+ N+M+ +
Sbjct: 827 TMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQ 886
Query: 190 DCSPNTITYNTLIST 204
PN T T S
Sbjct: 887 GLIPNNKTSRTTTSN 901
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 277 bits (708), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 162/540 (30%), Positives = 277/540 (51%), Gaps = 38/540 (7%)
Query: 21 STFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGALRIREQ 80
S F++LI+ +A ++R A + G L+ L+ G ++ A + ++
Sbjct: 166 SVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQE 225
Query: 81 MVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCKVGH 140
+ G + T+N++V+ CK+G++E +F+ ++ +G PD TYNTL++ G
Sbjct: 226 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285
Query: 141 VKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTITYNT 200
+++A E+M+ M +GF P V+TYN++I+GLCK G+ E A E+ +M+ SP++ TY +
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 201 LISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKG 260
L+ CK+ V E ++ + S+ ++PD+ F+S++ + N D A+ F +K G
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 261 CQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAE 320
PD Y +LI C +GM+ A+ L EM GCA +VVTYNT++ G CK K + EA+
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 321 EIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYY 380
++F+EM + + +S T LIDG CK +++A +L +M + ++ D TYN+LL +
Sbjct: 466 KLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGF 525
Query: 381 CRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRV--------EVASKLLRSIQ 432
+ GDI A +I +M S P ++Y L+ LC G + E+ SK ++
Sbjct: 526 GKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTV 585
Query: 433 M---------------------------KGIVLTPQAYNPVIQALFRRKRTTEAMRLFRE 465
M +G V +YN +I R + ++A L ++
Sbjct: 586 MICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKK 645
Query: 466 MMEKADP--PDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVS 523
M E+ PD TY + G C + EA + +M+ERG P+ S++ + G VS
Sbjct: 646 MEEEQGGLVPDVFTYNSILHGFCR-QNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVS 704
Score = 265 bits (677), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 163/547 (29%), Positives = 267/547 (48%), Gaps = 38/547 (6%)
Query: 1 LKLVETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTT 60
L+ A + S+G + N LI +L + + A + +E+ G+ + T
Sbjct: 181 LREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNI 240
Query: 61 LMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEG 120
++ L ++G ++ Q+ E G VT N L+ + +G +E+A + M +G
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG 300
Query: 121 FNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAV 180
F+P +TYNT++NGLCK G ++A EV ML+ G PD TY SL+ CK G+V E
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE 360
Query: 181 EILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 240
++ + M RD P+ + +++++S + +++A + G++PD + LIQG
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 420
Query: 241 CLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESS------ 294
C VAM L EM +GC D TYN ++ LC R ML EA KL EM
Sbjct: 421 CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDS 480
Query: 295 -------------GCARN----------------VVTYNTLIDGFCKLKRIEEAEEIFDE 325
G +N VVTYNTL+DGF K+ I+ A+EI+ +
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWAD 540
Query: 326 MEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGD 385
M + I ++Y+ L++ LC + +A ++ D+MI + +KP NS++ YCR+G+
Sbjct: 541 MVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGN 600
Query: 386 IKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQ--AY 443
++ M S G PD ++Y TLI G + + A L++ ++ + L P Y
Sbjct: 601 ASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTY 660
Query: 444 NPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEML 503
N ++ R+ + EA + R+M+E+ PD TY + G + + EA EML
Sbjct: 661 NSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDN-LTEAFRIHDEML 719
Query: 504 ERGFLPE 510
+RGF P+
Sbjct: 720 QRGFSPD 726
Score = 241 bits (614), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 140/486 (28%), Positives = 246/486 (50%), Gaps = 4/486 (0%)
Query: 52 APDERTFTTLMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALS 111
++ F L++ ++ L A + G V+ N L+ + G +E A
Sbjct: 162 GSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWG 221
Query: 112 FIQEMVSEGFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLC 171
QE+ G + +T N +VN LCK G +++ + + ++G PD+ TYN+LIS
Sbjct: 222 VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYS 281
Query: 172 KLGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVC 231
G +EEA E++N M + SP TYNT+I+ LCK + E A E+ + G+ PD
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 341
Query: 232 TFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEM 291
T+ SL+ C + ++F +M+++ PD ++ ++ G L++AL +
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401
Query: 292 ESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRV 351
+ +G + V Y LI G+C+ I A + +EM QG + + VTYNT++ GLCK + +
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461
Query: 352 EDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTL 411
+A +L ++M L PD +T L+ +C+ G+++ A ++ Q M D+VTY TL
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTL 521
Query: 412 IGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKAD 471
+ G K G ++ A ++ + K I+ TP +Y+ ++ AL + EA R++ EM+ K
Sbjct: 522 LDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581
Query: 472 PPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLV 531
P + + +G C G + F+ +M+ GF+P+ S+ L G V +EE +
Sbjct: 582 KPTVMICNSMIKGYCRSGNA-SDGESFLEKMISEGFVPDCISYNTLIYGFV---REENMS 637
Query: 532 ELIDMV 537
+ +V
Sbjct: 638 KAFGLV 643
Score = 189 bits (481), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 212/443 (47%), Gaps = 25/443 (5%)
Query: 153 QEGFDPDVFTYNSL-----ISGLCKLGEVEEAVEILNQMILR-----------------D 190
Q GF F + SL I L + G + +A L +MI R +
Sbjct: 101 QLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSN 160
Query: 191 CSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAM 250
C N ++ LI T + ++ EA E +L SKG + N+LI L ++A
Sbjct: 161 CGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAW 220
Query: 251 ELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGF 310
++QE+ G + +T N+++++LC G +E+ L +++ G ++VTYNTLI +
Sbjct: 221 GVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAY 280
Query: 311 CKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDK 370
+EEA E+ + M +G S TYNT+I+GLCK + E A ++ +M+ GL PD
Sbjct: 281 SSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDS 340
Query: 371 FTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRS 430
TY SLL C+ GD+ + +M S PD+V + +++ ++G ++ A S
Sbjct: 341 TTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNS 400
Query: 431 IQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGG 490
++ G++ Y +IQ R+ + AM L EM+++ D +TY + GLC
Sbjct: 401 VKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCK-RK 459
Query: 491 PIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELIDMVMDKAKFSDRET-- 548
+GEA EM ER P+ + +L +G LG + +EL + +K D T
Sbjct: 460 MLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYN 519
Query: 549 SMVRGFLKIRKFQDALATFGDIL 571
+++ GF K+ A + D++
Sbjct: 520 TLLDGFGKVGDIDTAKEIWADMV 542
Score = 145 bits (367), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 134/293 (45%), Gaps = 37/293 (12%)
Query: 10 DMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEG 69
+M+ +G DV T+N ++ LCK + A + EM L PD T T L+ G + G
Sbjct: 435 EMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLG 494
Query: 70 NLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYN 129
NL A+ + ++M E + VT N L+ GF K G I+ A +MVS+ P +Y+
Sbjct: 495 NLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYS 554
Query: 130 TLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMI-- 187
LVN LC GH+ +A V D M+ + P V NS+I G C+ G + L +MI
Sbjct: 555 ILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE 614
Query: 188 --LRDC---------------------------------SPNTITYNTLISTLCKENQVE 212
+ DC P+ TYN+++ C++NQ++
Sbjct: 615 GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMK 674
Query: 213 EATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDE 265
EA + R + +G+ PD T+ +I G N A + EM +G PD+
Sbjct: 675 EAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
Score = 37.0 bits (84), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 27/56 (48%)
Query: 1 LKLVETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDER 56
+K E M+ RG+ PD ST+ +I + A + +EM G +PD++
Sbjct: 673 MKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDK 728
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 276 bits (705), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 144/421 (34%), Positives = 236/421 (56%), Gaps = 5/421 (1%)
Query: 18 PDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGALRI 77
P + F+ ++ + K+ I + M G+ D ++ ++ L AL +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 78 REQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCK 137
+M++ G VTV+ L++GFC+ R+ DA+ + +M GF PD YNT+++G CK
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 138 VGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTIT 197
+G V A+E+ D M ++G D TYNSL++GLC G +A ++ M++RD PN IT
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 198 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMK 257
+ +I KE + EA +L +T + + PDV T+NSLI GLC+ D A ++ M
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 258 TKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIE 317
TKGC PD TYN LI+ C ++E KL +EM G + +TYNT+I G+ + R +
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366
Query: 318 EAEEIFDEMEIQGISRNSV-TYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSL 376
A+EIF M+ SR ++ TY+ L+ GLC + RVE A L + M ++ D TYN +
Sbjct: 367 AAQEIFSRMD----SRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIV 422
Query: 377 LTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGI 436
+ C+ G+++ A D+ ++++ G +PD+V+Y T+I G C+ + + + L R +Q G+
Sbjct: 423 IHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 482
Query: 437 V 437
+
Sbjct: 483 L 483
Score = 265 bits (678), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 148/447 (33%), Positives = 244/447 (54%), Gaps = 16/447 (3%)
Query: 27 IKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGALRIREQMVEHGC 86
I CK Q RP P F+ ++ + + N D + + M G
Sbjct: 54 IDLFCKMIQSRPL-------------PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGI 100
Query: 87 LVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCKVGHVKQALE 146
+ N++++ C+ R ALS + +M+ G+ PD T ++L+NG C+ V A++
Sbjct: 101 GHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAID 160
Query: 147 VMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTITYNTLISTLC 206
++ M + GF PDV YN++I G CK+G V +AVE+ ++M + +TYN+L++ LC
Sbjct: 161 LVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLC 220
Query: 207 KENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEF 266
+ +A L R + + I+P+V TF ++I F AM+L++EM + PD F
Sbjct: 221 CSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF 280
Query: 267 TYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEM 326
TYN LI+ LC G ++EA ++L M + GC +VVTYNTLI+GFCK KR++E ++F EM
Sbjct: 281 TYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340
Query: 327 EIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDI 386
+G+ +++TYNT+I G ++ R + A ++ +M +P+ TY+ LL C +
Sbjct: 341 AQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRV 397
Query: 387 KRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPV 446
++A + +NM + E DI TY +I G+CK G VE A L RS+ KG+ +Y +
Sbjct: 398 EKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTM 457
Query: 447 IQALFRRKRTTEAMRLFREMMEKADPP 473
I R+++ ++ L+R+M E P
Sbjct: 458 ISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 243 bits (620), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 142/431 (32%), Positives = 226/431 (52%), Gaps = 7/431 (1%)
Query: 56 RTFTTLMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQE 115
RTF+T + NL+ + + +M++ L + V + ++ K + +S
Sbjct: 39 RTFSTKRSSM----NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHH 94
Query: 116 MVSEGFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGE 175
M G D ++YN ++N LC+ AL V+ M++ G++PDV T +SLI+G C+
Sbjct: 95 MEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNR 154
Query: 176 VEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNS 235
V +A++++++M P+ + YNT+I CK V +A EL + G+ D T+NS
Sbjct: 155 VFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNS 214
Query: 236 LIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSG 295
L+ GLC + + A L ++M + P+ T+ +ID G EA+KL +EM
Sbjct: 215 LVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC 274
Query: 296 CARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAA 355
+V TYN+LI+G C R++EA+++ D M +G + VTYNTLI+G CKS+RV++
Sbjct: 275 VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGT 334
Query: 356 QLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGL 415
+L +M GL D TYN+++ Y +AG A +I M S P+I TY L+ GL
Sbjct: 335 KLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGL 391
Query: 416 CKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDA 475
C RVE A L ++Q I L YN VI + + +A LFR + K PD
Sbjct: 392 CMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDV 451
Query: 476 LTYKHVFRGLC 486
++Y + G C
Sbjct: 452 VSYTTMISGFC 462
Score = 239 bits (610), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 122/358 (34%), Positives = 207/358 (57%), Gaps = 3/358 (0%)
Query: 11 MVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGN 70
M+ G +PDV T + LI C+ +++ AI ++ +M G PD + T++ G + G
Sbjct: 130 MMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGL 189
Query: 71 LDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNT 130
++ A+ + ++M G VT N LV G C GR DA +++MV P+ T+
Sbjct: 190 VNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTA 249
Query: 131 LVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRD 190
+++ K G +A+++ + M + DPDVFTYNSLI+GLC G V+EA ++L+ M+ +
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309
Query: 191 CSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAM 250
C P+ +TYNTLI+ CK +V+E T+L R + +G++ D T+N++IQG D A
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ 369
Query: 251 ELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGF 310
E+F M ++ P+ TY++L+ LC +E+AL L + M+ S ++ TYN +I G
Sbjct: 370 EIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGM 426
Query: 311 CKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKP 368
CK+ +E+A ++F + +G+ + V+Y T+I G C+ R+ + + L +M +GL P
Sbjct: 427 CKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 231 bits (589), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 126/389 (32%), Positives = 207/389 (53%), Gaps = 3/389 (0%)
Query: 15 GIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGA 74
GI D+ ++NI+I LC+ + A+ ++ +M +G PD T ++L+ G + + A
Sbjct: 99 GIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDA 158
Query: 75 LRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNG 134
+ + +M E G V N ++ G CK G + DA+ M +G D TYN+LV G
Sbjct: 159 IDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAG 218
Query: 135 LCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPN 194
LC G A +M M+ P+V T+ ++I K G+ EA+++ +M R P+
Sbjct: 219 LCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPD 278
Query: 195 TITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQ 254
TYN+LI+ LC +V+EA ++ ++ +KG LPDV T+N+LI G C + D +LF+
Sbjct: 279 VFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFR 338
Query: 255 EMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLK 314
EM +G D TYN +I G + A ++ M+S N+ TY+ L+ G C
Sbjct: 339 EMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRP---NIRTYSILLYGLCMNW 395
Query: 315 RIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYN 374
R+E+A +F+ M+ I + TYN +I G+CK VEDA L + +GLKPD +Y
Sbjct: 396 RVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYT 455
Query: 375 SLLTYYCRAGDIKRAADIVQNMTSNGCEP 403
++++ +CR ++ + + M +G P
Sbjct: 456 TMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 122/396 (30%), Positives = 204/396 (51%), Gaps = 8/396 (2%)
Query: 175 EVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 234
+EE +++ +MI P+ + ++ ++S + K + L + GI D+ ++N
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108
Query: 235 SLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESS 294
+I LC S F +A+ + +M G +PD T + LI+ C + +A+ L+ +ME
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168
Query: 295 GCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDA 354
G +VV YNT+IDG CK+ + +A E+FD ME G+ ++VTYN+L+ GLC S R DA
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 355 AQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGG 414
A+LM M+M + P+ T+ +++ + + G A + + MT +PD+ TY +LI G
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288
Query: 415 LCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPD 474
LC GRV+ A ++L + KG + YN +I + KR E +LFREM ++ D
Sbjct: 289 LCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 348
Query: 475 ALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELI 534
+TY + +G G P A + M R P ++ +L GL + E + L
Sbjct: 349 TITYNTIIQGYFQAGRP-DAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLF 404
Query: 535 DMVMDKAKFSDRETS---MVRGFLKIRKFQDALATF 567
+ M K++ T+ ++ G KI +DA F
Sbjct: 405 EN-MQKSEIELDITTYNIVIHGMCKIGNVEDAWDLF 439
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 135/254 (53%), Gaps = 3/254 (1%)
Query: 10 DMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEG 69
DMV R I P+V TF +I K + A+ + EEM + PD T+ +L+ GL G
Sbjct: 234 DMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 293
Query: 70 NLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYN 129
+D A ++ + MV GCL VT N L++GFCK R+++ +EM G D TYN
Sbjct: 294 RVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYN 353
Query: 130 TLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILR 189
T++ G + G A E+ M P++ TY+ L+ GLC VE+A+ + M
Sbjct: 354 TIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKS 410
Query: 190 DCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVA 249
+ + TYN +I +CK VE+A +L R L+ KG+ PDV ++ ++I G C +D +
Sbjct: 411 EIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKS 470
Query: 250 MELFQEMKTKGCQP 263
L+++M+ G P
Sbjct: 471 DLLYRKMQEDGLLP 484
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 180/389 (46%), Gaps = 15/389 (3%)
Query: 199 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTS-----NFDVAMELF 253
+T IS K N+ L L KG P + F S G ++ N + ++LF
Sbjct: 4 STTISIASKANKF-----LNLCLLQKGN-PVIVPFISRFWGRTFSTKRSSMNLEEEIDLF 57
Query: 254 QEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKL 313
+M P ++ ++ + + + L ME G ++ +YN +I+ C+
Sbjct: 58 CKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRC 117
Query: 314 KRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTY 373
R A + +M G + VT ++LI+G C+ RV DA L+ +M G +PD Y
Sbjct: 118 SRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIY 177
Query: 374 NSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQM 433
N+++ C+ G + A ++ M +G D VTY +L+ GLC +GR A++L+R + M
Sbjct: 178 NTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVM 237
Query: 434 KGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIG 493
+ IV + VI + + +EAM+L+ EM + PD TY + GLC G +
Sbjct: 238 RDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCM-HGRVD 296
Query: 494 EAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELIDMVMDKAKFSDRET--SMV 551
EA + M+ +G LP+ ++ L G + + +L + + D T +++
Sbjct: 297 EAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTII 356
Query: 552 RGFLKIRKFQDALATFGDILDSRMPRKTF 580
+G+ + + DA +DSR +T+
Sbjct: 357 QGYFQAGR-PDAAQEIFSRMDSRPNIRTY 384
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 119/221 (53%), Gaps = 3/221 (1%)
Query: 8 HADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIE 67
+ +M R + PDV T+N LI LC ++ A M++ M G PD T+ TL+ G +
Sbjct: 267 YEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCK 326
Query: 68 EGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFT 127
+D ++ +M + G + +T N ++ G+ + GR + A M S P+ T
Sbjct: 327 SKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRT 383
Query: 128 YNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMI 187
Y+ L+ GLC V++AL + + M + + D+ TYN +I G+CK+G VE+A ++ +
Sbjct: 384 YSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLS 443
Query: 188 LRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILP 228
+ P+ ++Y T+IS C++ Q +++ L R + G+LP
Sbjct: 444 CKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890
OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1
Length = 701
Score = 275 bits (703), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 160/498 (32%), Positives = 263/498 (52%), Gaps = 7/498 (1%)
Query: 10 DMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEG 69
DM ++G+ P T N +++ + I A + +EM G+ PD ++ ++ G +G
Sbjct: 172 DMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDG 231
Query: 70 NLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYN 129
+ A R M++ G + N T +++ C+ G + A+ + ++M+ GF P+ +
Sbjct: 232 KIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFT 291
Query: 130 TLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILR 189
+L++GLCK G +KQA E+++ M++ G+ P+V+T+ +LI GLCK G E+A + +++
Sbjct: 292 SLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRS 351
Query: 190 DC-SPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDV 248
D PN TY ++I CKE+++ A L + +G+ P+V T+ +LI G C +F
Sbjct: 352 DTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGR 411
Query: 249 AMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLID 308
A EL M +G P+ +TYN IDSLC + EA +LL + S G + VTY LI
Sbjct: 412 AYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQ 471
Query: 309 GFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKP 368
CK I +A F M G + N LI C+ ++++++ +L ++ GL P
Sbjct: 472 EQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIP 531
Query: 369 DKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLL 428
K TY S+++ YC+ GDI A NM +GC PD TYG+LI GLCK V+ A KL
Sbjct: 532 TKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLY 591
Query: 429 RSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDAL-TYKHVFRGLCN 487
++ +G L+P V A KR A + ++E D + T + + R LC+
Sbjct: 592 EAMIDRG--LSPPEVTRVTLAYEYCKRNDSANAMI--LLEPLDKKLWIRTVRTLVRKLCS 647
Query: 488 GGGPIGEAVDFVIEMLER 505
+G A F ++LE+
Sbjct: 648 -EKKVGVAALFFQKLLEK 664
Score = 227 bits (578), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 142/507 (28%), Positives = 244/507 (48%), Gaps = 6/507 (1%)
Query: 1 LKLVETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTT 60
++ E +M RG+ PD S++ +++ + +I+ A + M G PD T T
Sbjct: 198 IEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTL 257
Query: 61 LMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEG 120
++ L E G ++ A+ +M++ G + L+ G CK+G I+ A ++EMV G
Sbjct: 258 ILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNG 317
Query: 121 FNPDQFTYNTLVNGLCKVGHVKQALEV-MDMMLQEGFDPDVFTYNSLISGLCKLGEVEEA 179
+ P+ +T+ L++GLCK G ++A + + ++ + + P+V TY S+I G CK ++ A
Sbjct: 318 WKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRA 377
Query: 180 VEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 239
+ ++M + PN TY TLI+ CK A EL ++ +G +P++ T+N+ I
Sbjct: 378 EMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDS 437
Query: 240 LCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARN 299
LC S A EL + + G + D TY +LI C + + +AL M +G +
Sbjct: 438 LCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEAD 497
Query: 300 VVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMD 359
+ N LI FC+ K+++E+E +F + G+ TY ++I CK ++ A +
Sbjct: 498 MRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFH 557
Query: 360 QMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAG 419
M G PD FTY SL++ C+ + A + + M G P VT TL CK
Sbjct: 558 NMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRN 617
Query: 420 RVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYK 479
A LL + K + T + +++ L K+ A F++++EK D +T
Sbjct: 618 DSANAMILLEPLDKKLWIRTVRT---LVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLA 674
Query: 480 HVFRGLCNGGGPIGEAVDFVIEMLERG 506
F C+ G D + E + RG
Sbjct: 675 -AFTTACSESGKNNLVTD-LTERISRG 699
Score = 212 bits (539), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 142/487 (29%), Positives = 229/487 (47%), Gaps = 17/487 (3%)
Query: 56 RTFTTLMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQE 115
R + L+ GNL A + C++ N F + GR+ +A+ + +
Sbjct: 128 RLYLVTADSLLANGNLQKAHEVMR------CMLRN---------FSEIGRLNEAVGMVMD 172
Query: 116 MVSEGFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGE 175
M ++G P T N ++ ++G ++ A V D M G PD +Y ++ G + G+
Sbjct: 173 MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGK 232
Query: 176 VEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNS 235
++EA L MI R P+ T +++ LC+ V A R + G P++ F S
Sbjct: 233 IQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTS 292
Query: 236 LIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKL-LKEMESS 294
LI GLC + A E+ +EM G +P+ +T+ LID LC RG E+A +L LK + S
Sbjct: 293 LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD 352
Query: 295 GCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDA 354
NV TY ++I G+CK ++ AE +F M+ QG+ N TY TLI+G CK+ A
Sbjct: 353 TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRA 412
Query: 355 AQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGG 414
+LM+ M EG P+ +TYN+ + C+ A +++ S G E D VTY LI
Sbjct: 413 YELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQE 472
Query: 415 LCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPD 474
CK + A + G + N +I A R+K+ E+ RLF+ ++ P
Sbjct: 473 QCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPT 532
Query: 475 ALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELI 534
TY + C G I A+ + M G +P+ ++ L GL + +L
Sbjct: 533 KETYTSMISCYCK-EGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLY 591
Query: 535 DMVMDKA 541
+ ++D+
Sbjct: 592 EAMIDRG 598
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 273 bits (699), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 158/483 (32%), Positives = 257/483 (53%), Gaps = 6/483 (1%)
Query: 1 LKLVETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTT 60
L L+ET MV +G PDV LIK I A+ +ME + +G PD +
Sbjct: 109 LHLLET----MVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNA 163
Query: 61 LMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEG 120
L+ G + +D A R+ ++M VT N+++ C G+++ AL + +++S+
Sbjct: 164 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDN 223
Query: 121 FNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAV 180
P TY L+ G V +AL++MD ML G PD+FTYN++I G+CK G V+ A
Sbjct: 224 CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAF 283
Query: 181 EILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 240
E++ + L+ C P+ I+YN L+ L + + EE +L + S+ P+V T++ LI L
Sbjct: 284 EMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTL 343
Query: 241 CLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNV 300
C + AM L + MK KG PD ++Y+ LI + C G L+ A++ L+ M S GC ++
Sbjct: 344 CRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 403
Query: 301 VTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQ 360
V YNT++ CK + ++A EIF ++ G S NS +YNT+ L S A ++ +
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463
Query: 361 MIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGR 420
M+ G+ PD+ TYNS+++ CR G + A +++ +M S P +VTY ++ G CKA R
Sbjct: 464 MMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 523
Query: 421 VEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKH 480
+E A +L S+ G Y +I+ + EAM L +++ + D ++K
Sbjct: 524 IEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV-RIDAISEYSFKR 582
Query: 481 VFR 483
+ R
Sbjct: 583 LHR 585
Score = 273 bits (698), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 137/440 (31%), Positives = 244/440 (55%), Gaps = 2/440 (0%)
Query: 96 LVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEG 155
+ H C+ G ++L ++ MV +G+NPD L+ G + ++ +A+ VM+++ + G
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 156 FDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEAT 215
PDVF YN+LI+G CK+ +++A +L++M +D SP+T+TYN +I +LC +++ A
Sbjct: 155 -QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 216 ELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSL 275
++ L S P V T+ LI+ L D A++L EM ++G +PD FTYN +I +
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 276 CSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNS 335
C GM++ A ++++ +E GC +V++YN L+ + EE E++ +M + N
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333
Query: 336 VTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQN 395
VTY+ LI LC+ ++E+A L+ M +GL PD ++Y+ L+ +CR G + A + ++
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393
Query: 396 MTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKR 455
M S+GC PDIV Y T++ LCK G+ + A ++ + G +YN + AL+
Sbjct: 394 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD 453
Query: 456 TTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFY 515
A+ + EMM PD +TY + LC G + EA + +++M F P ++
Sbjct: 454 KIRALHMILEMMSNGIDPDEITYNSMISCLCR-EGMVDEAFELLVDMRSCEFHPSVVTYN 512
Query: 516 MLAEGLVSLGKEETLVELID 535
++ G + E + +++
Sbjct: 513 IVLLGFCKAHRIEDAINVLE 532
Score = 265 bits (676), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 159/501 (31%), Positives = 257/501 (51%), Gaps = 3/501 (0%)
Query: 69 GNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTY 128
GN +L + E MV G + L+ GF I A+ + E++ + PD F Y
Sbjct: 103 GNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVR-VMEILEKFGQPDVFAY 161
Query: 129 NTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMIL 188
N L+NG CK+ + A V+D M + F PD TYN +I LC G+++ A+++LNQ++
Sbjct: 162 NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLS 221
Query: 189 RDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDV 248
+C P ITY LI E V+EA +L + S+G+ PD+ T+N++I+G+C D
Sbjct: 222 DNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDR 281
Query: 249 AMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLID 308
A E+ + ++ KGC+PD +YN+L+ +L ++G EE KL+ +M S C NVVTY+ LI
Sbjct: 282 AFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILIT 341
Query: 309 GFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKP 368
C+ +IEEA + M+ +G++ ++ +Y+ LI C+ R++ A + ++ MI +G P
Sbjct: 342 TLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLP 401
Query: 369 DKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLL 428
D YN++L C+ G +A +I + GC P+ +Y T+ L +G A ++
Sbjct: 402 DIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMI 461
Query: 429 RSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNG 488
+ GI YN +I L R EA L +M P +TY V G C
Sbjct: 462 LEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCK- 520
Query: 489 GGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELI-DMVMDKAKFSDRE 547
I +A++ + M+ G P +++ +L EG+ G +EL D+V A
Sbjct: 521 AHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSF 580
Query: 548 TSMVRGFLKIRKFQDALATFG 568
+ R F + Q + TFG
Sbjct: 581 KRLHRTFPLLNVLQRSSQTFG 601
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 273 bits (699), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 145/429 (33%), Positives = 233/429 (54%)
Query: 9 ADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEE 68
+DMV P + FN L+ A+ K + I + ++M G+ D TF ++
Sbjct: 74 SDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCC 133
Query: 69 GNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTY 128
+ AL I +M++ G VT+ LV+GFC+ R+ DA+S + +MV G+ PD Y
Sbjct: 134 FQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAY 193
Query: 129 NTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMIL 188
N +++ LCK V A + + ++G P+V TY +L++GLC +A +L+ MI
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK 253
Query: 189 RDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDV 248
+ +PN ITY+ L+ K +V EA EL + I PD+ T++SLI GLCL D
Sbjct: 254 KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDE 313
Query: 249 AMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLID 308
A ++F M +KGC D +YN LI+ C +E+ +KL +EM G N VTYNTLI
Sbjct: 314 ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQ 373
Query: 309 GFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKP 368
GF + +++A+E F +M+ GIS + TYN L+ GLC + +E A + + M +
Sbjct: 374 GFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 433
Query: 369 DKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLL 428
D TY +++ C+ G ++ A + +++ G +PDIVTY T++ GLC G + L
Sbjct: 434 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY 493
Query: 429 RSIQMKGIV 437
++ +G++
Sbjct: 494 TKMKQEGLM 502
Score = 265 bits (676), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 150/477 (31%), Positives = 250/477 (52%), Gaps = 9/477 (1%)
Query: 35 QIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVN 94
++ AI + +M P F L+ +++ D + + ++M G T N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 95 VLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQE 154
++++ FC ++ ALS + +M+ G+ PD+ T +LVNG C+ V A+ ++D M++
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 155 GFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEA 214
G+ PD+ YN++I LCK V +A + ++ + PN +TY L++ LC ++ +A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 215 TELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDS 274
L + K I P+V T+++L+ A ELF+EM PD TY+ LI+
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 275 LCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRN 334
LC ++EA ++ M S GC +VV+YNTLI+GFCK KR+E+ ++F EM +G+ N
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 335 SVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQ 394
+VTYNTLI G ++ V+ A + QM G+ PD +TYN LL C G++++A I +
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424
Query: 395 NMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRK 454
+M + DIVTY T+I G+CK G+VE A L S+ +KG+ Y ++ L +
Sbjct: 425 DMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
Query: 455 RTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEF 511
E L+ +M ++ + T G I + + + +ML G+ P
Sbjct: 485 LLHEVEALYTKMKQEGLMKNDCTLSD---------GDITLSAELIKKMLSCGYAPSL 532
Score = 247 bits (630), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 133/430 (30%), Positives = 228/430 (53%), Gaps = 29/430 (6%)
Query: 15 GIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGA 74
GI+ D+ TFNI+I C Q+ A+ ++ +M G PD T +L+ G + A
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 174
Query: 75 LRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNG 134
+ + ++MVE G V N ++ CK R+ DA F +E+ +G P+ TY LVNG
Sbjct: 175 VSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG 234
Query: 135 LCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPN 194
LC A ++ M+++ P+V TY++L+ K G+V EA E+ +M+ P+
Sbjct: 235 LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294
Query: 195 TITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQ 254
+TY++LI+ LC ++++EA ++ ++ SKG L DV ++N+LI G C + M+LF+
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFR 354
Query: 255 EMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLK 314
EM +G + TYN LI G +++A + +M+ G + ++ TYN L+ G C
Sbjct: 355 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNG 414
Query: 315 RIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYN 374
+E+A IF++M+ + + + VTY T+I G+CK+ +VE+A L + ++GLKPD TY
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYT 474
Query: 375 SLLTYYCRA---------------------------GDIKRAADIVQNMTSNGCEPDIVT 407
++++ C GDI +A++++ M S G P ++
Sbjct: 475 TMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLK 534
Query: 408 YGTLIGGLCK 417
+ G+CK
Sbjct: 535 --DIKSGVCK 542
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 165/304 (54%), Gaps = 10/304 (3%)
Query: 9 ADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEE 68
+DM+ + I P+V T++ L+ A K ++ A + EEM + PD T+++L+ GL
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 308
Query: 69 GNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTY 128
+D A ++ + MV GCL V+ N L++GFCK R+ED + +EM G + TY
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368
Query: 129 NTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMIL 188
NTL+ G + G V +A E M G PD++TYN L+ GLC GE+E+A+ I M
Sbjct: 369 NTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK 428
Query: 189 RDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDV 248
R+ + +TY T+I +CK +VEEA L L+ KG+ PD+ T+ +++ GLC
Sbjct: 429 REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHE 488
Query: 249 AMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLID 308
L+ +MK +G ++ T S G + + +L+K+M S G A +++ +
Sbjct: 489 VEALYTKMKQEGLMKNDCTL--------SDGDITLSAELIKKMLSCGYAPSLL--KDIKS 538
Query: 309 GFCK 312
G CK
Sbjct: 539 GVCK 542
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 268 bits (685), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 143/410 (34%), Positives = 228/410 (55%)
Query: 15 GIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGA 74
GI ++ T+NILI C+ ++ A+ ++ +M G PD T +L+ G + A
Sbjct: 108 GISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 167
Query: 75 LRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNG 134
+ + +QMVE G VT L+HG + +A++ I MV G PD TY +VNG
Sbjct: 168 VALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNG 227
Query: 135 LCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPN 194
LCK G AL +++ M + +V Y+++I LCK ++A+ + +M + PN
Sbjct: 228 LCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 287
Query: 195 TITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQ 254
ITY++LIS LC + +A+ L + + I P++ TF++LI A +L++
Sbjct: 288 VITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYE 347
Query: 255 EMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLK 314
EM + P+ FTY+ LI+ C L EA ++L+ M C NVVTYNTLI+GFCK K
Sbjct: 348 EMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAK 407
Query: 315 RIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYN 374
R+++ E+F EM +G+ N+VTY TLI G ++R ++A + QM+ G+ P+ TYN
Sbjct: 408 RVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN 467
Query: 375 SLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVA 424
LL C+ G + +A + + + + EPDI TY +I G+CKAG+ ++
Sbjct: 468 ILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517
Score = 253 bits (647), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 140/459 (30%), Positives = 245/459 (53%), Gaps = 3/459 (0%)
Query: 71 LDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNT 130
LD A+ + M + + + + L+ K + + +SF ++M G + + +TYN
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 131 LVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRD 190
L+N C+ + AL ++ M++ G++PD+ T NSL++G C + +AV +++QM+
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 191 CSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAM 250
P+T+T+ TLI L N+ EA L + +G PD+ T+ +++ GLC + D+A+
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 251 ELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGF 310
L +M+ + + Y+ +IDSLC ++AL L EME+ G NV+TY++LI
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298
Query: 311 CKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDK 370
C R +A + +M + I+ N VT++ LID K ++ A +L ++MI + P+
Sbjct: 299 CNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNI 358
Query: 371 FTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRS 430
FTY+SL+ +C + A +++ M C P++VTY TLI G CKA RV+ +L R
Sbjct: 359 FTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFRE 418
Query: 431 IQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGG 490
+ +G+V Y +I F+ + A +F++M+ P+ LTY + GLC G
Sbjct: 419 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 478
Query: 491 PIGEAVDFVIEMLERGFL-PEFSSFYMLAEGLVSLGKEE 528
V V E L+R + P+ ++ ++ EG+ GK +
Sbjct: 479 LAKAMV--VFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
Score = 253 bits (646), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 151/487 (31%), Positives = 250/487 (51%), Gaps = 35/487 (7%)
Query: 18 PDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGALRI 77
P + F+ L+ A+ K ++ I E+M G++ + T+ L+ L AL +
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 78 REQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCK 137
+M++ G VT+N L++GFC RI DA++ + +MV G+ PD T+ TL++GL
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFL 195
Query: 138 VGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTIT 197
+A+ ++D M+Q G PD+ TY ++++GLCK G+ + A+ +LN+M N +
Sbjct: 196 HNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 255
Query: 198 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMK 257
Y+T+I +LCK ++A L + +KG+ P+V T++SLI LC + A L +M
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 258 TKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIE 317
+ P+ T++ LID+ +G L +A KL +EM N+ TY++LI+GFC L R+
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375
Query: 318 EAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLL 377
EA+++ + M + N VTYNTLI+G CK++RV+ +L +M GL + TY +L+
Sbjct: 376 EAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI 435
Query: 378 TYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIV 437
+ +A D A + + M S G P+I+TY L+ GLCK G++
Sbjct: 436 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL---------------- 479
Query: 438 LTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVD 497
+AM +F + PD TY + G+C G +
Sbjct: 480 -------------------AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIY 520
Query: 498 FVIEMLE 504
FV L+
Sbjct: 521 FVASALK 527
Score = 249 bits (635), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 126/377 (33%), Positives = 210/377 (55%)
Query: 11 MVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGN 70
M+ G +PD+ T N L+ C ++I A+ ++++M G PD TFTTL+ GL
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNK 198
Query: 71 LDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNT 130
A+ + ++MV+ GC VT +V+G CK G + AL+ + +M + + Y+T
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 258
Query: 131 LVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRD 190
+++ LCK H AL + M +G P+V TY+SLIS LC G +A +L+ MI R
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK 318
Query: 191 CSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAM 250
+PN +T++ LI K+ ++ +A +L + + I P++ T++SLI G C+ A
Sbjct: 319 INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAK 378
Query: 251 ELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGF 310
++ + M K C P+ TYN LI+ C +++ ++L +EM G N VTY TLI GF
Sbjct: 379 QMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGF 438
Query: 311 CKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDK 370
+ + + A+ +F +M G+ N +TYN L+DGLCK+ ++ A + + + ++PD
Sbjct: 439 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDI 498
Query: 371 FTYNSLLTYYCRAGDIK 387
+TYN ++ C+AG K
Sbjct: 499 YTYNIMIEGMCKAGKWK 515
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 184/372 (49%), Gaps = 3/372 (0%)
Query: 198 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMK 257
Y ++ T + ++++A L V+ P + F+ L+ + + FD+ + ++M+
Sbjct: 46 YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105
Query: 258 TKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIE 317
G + +TYN+LI+ C L AL LL +M G ++VT N+L++GFC RI
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRIS 165
Query: 318 EAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLL 377
+A + D+M G ++VT+ TLI GL + +A L+D+M+ G +PD TY +++
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225
Query: 378 TYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIV 437
C+ GD A +++ M + E ++V Y T+I LCK + A L ++ KG+
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285
Query: 438 LTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVD 497
Y+ +I L R ++A RL +M+E+ P+ +T+ + G + +A
Sbjct: 286 PNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLV-KAEK 344
Query: 498 FVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELIDMVMDKAKFSDRET--SMVRGFL 555
EM++R P ++ L G L + +++++++ K + T +++ GF
Sbjct: 345 LYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFC 404
Query: 556 KIRKFQDALATF 567
K ++ + F
Sbjct: 405 KAKRVDKGMELF 416
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 188/395 (47%), Gaps = 3/395 (0%)
Query: 175 EVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 234
E+++A+ + M P+ I ++ L+S + K N+ + + GI ++ T+N
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 235 SLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESS 294
LI C S +A+ L +M G +PD T N L++ C + +A+ L+ +M
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 295 GCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDA 354
G + VT+ TLI G + EA + D M +G + VTY +++GLCK + A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 355 AQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGG 414
L+++M ++ + Y++++ C+ A ++ M + G P+++TY +LI
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 415 LCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPD 474
LC GR AS+LL + + I ++ +I A ++ + +A +L+ EM++++ P+
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357
Query: 475 ALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELI 534
TY + G C +GEA + M+ + LP ++ L G + + +EL
Sbjct: 358 IFTYSSLINGFCM-LDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELF 416
Query: 535 DMVMDKAKFSD--RETSMVRGFLKIRKFQDALATF 567
+ + + T+++ GF + R +A F
Sbjct: 417 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 451
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 126/232 (54%)
Query: 10 DMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEG 69
+M ++G++P+V T++ LI LC + A ++ +M + P+ TF+ L+ +++G
Sbjct: 278 EMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKG 337
Query: 70 NLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYN 129
L A ++ E+M++ T + L++GFC R+ +A ++ M+ + P+ TYN
Sbjct: 338 KLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYN 397
Query: 130 TLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILR 189
TL+NG CK V + +E+ M Q G + TY +LI G + + + A + QM+
Sbjct: 398 TLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV 457
Query: 190 DCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 241
PN +TYN L+ LCK ++ +A + L + PD+ T+N +I+G+C
Sbjct: 458 GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 509
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 105/202 (51%)
Query: 9 ADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEE 68
+DM+ R I P++ TF+ LI A K ++ A + EEM + P+ T+++L+ G
Sbjct: 312 SDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCML 371
Query: 69 GNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTY 128
L A ++ E M+ CL VT N L++GFCK R++ + +EM G + TY
Sbjct: 372 DRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTY 431
Query: 129 NTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMIL 188
TL++G + A V M+ G P++ TYN L+ GLCK G++ +A+ + +
Sbjct: 432 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 491
Query: 189 RDCSPNTITYNTLISTLCKENQ 210
P+ TYN +I +CK +
Sbjct: 492 STMEPDIYTYNIMIEGMCKAGK 513
Score = 112 bits (280), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 96/171 (56%)
Query: 5 ETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQG 64
E + +M+ R I P++ T++ LI C ++ A M+E M P+ T+ TL+ G
Sbjct: 343 EKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLING 402
Query: 65 LIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPD 124
+ +D + + +M + G + VT L+HGF + ++A ++MVS G +P+
Sbjct: 403 FCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 462
Query: 125 QFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGE 175
TYN L++GLCK G + +A+ V + + + +PD++TYN +I G+CK G+
Sbjct: 463 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 91/223 (40%), Gaps = 5/223 (2%)
Query: 351 VEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGT 410
++DA L M P ++ LL+ + + M G ++ TY
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 411 LIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKA 470
LI C+ R+ +A LL + G N ++ R ++A+ L +M+E
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 471 DPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETL 530
PD +T+ + GL EAV + M++RG P+ ++ + GL G +
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKA-SEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 531 VELIDMVMDKAKFSDR---ETSMVRGFLKIRKFQDALATFGDI 570
+ L++ M+ AK ++++ K R DAL F ++
Sbjct: 238 LNLLNK-MEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 279
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 266 bits (681), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 159/497 (31%), Positives = 259/497 (52%), Gaps = 3/497 (0%)
Query: 13 SRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLD 72
++G P V +N ++ L K ++ A+ + EEM AP+ T+ L+ L G LD
Sbjct: 336 AKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLD 394
Query: 73 GALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLV 132
A +R+ M + G TVN++V CK ++++A + +EM + PD+ T+ +L+
Sbjct: 395 TAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLI 454
Query: 133 NGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCS 192
+GL KVG V A +V + ML + Y SLI G E+ +I MI ++CS
Sbjct: 455 DGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCS 514
Query: 193 PNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMEL 252
P+ NT + + K + E+ + + ++ +PD +++ LI GL + EL
Sbjct: 515 PDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYEL 574
Query: 253 FQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCK 312
F MK +GC D YN++ID C G + +A +LL+EM++ G VVTY ++IDG K
Sbjct: 575 FYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAK 634
Query: 313 LKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFT 372
+ R++EA +F+E + + I N V Y++LIDG K R+++A ++++++ +GL P+ +T
Sbjct: 635 IDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYT 694
Query: 373 YNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQ 432
+NSLL +A +I A Q+M C P+ VTYG LI GLCK + A + +Q
Sbjct: 695 WNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQ 754
Query: 433 MKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPI 492
+G+ + +Y +I L + EA LF PD+ Y + GL NG +
Sbjct: 755 KQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAM 814
Query: 493 GEAVDFVIEMLERGFLP 509
+A E RG LP
Sbjct: 815 -DAFSLFEETRRRG-LP 829
Score = 249 bits (637), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 163/561 (29%), Positives = 273/561 (48%), Gaps = 12/561 (2%)
Query: 9 ADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEE 68
+M G P V+T ++ KA+++R +++ M + P +TTL+
Sbjct: 122 GEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAV 181
Query: 69 GNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTY 128
+ D L + +QM E G T L+ GF KEGR++ ALS + EM S + D Y
Sbjct: 182 NHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLY 241
Query: 129 NTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMIL 188
N ++ KVG V A + + G PD TY S+I LCK ++EAVE+ +
Sbjct: 242 NVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEK 301
Query: 189 RDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDV 248
P T YNT+I + +EA L +KG +P V +N ++ L D
Sbjct: 302 NRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDE 361
Query: 249 AMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLID 308
A+++F+EMK K P+ TYN+LID LC G L+ A +L M+ +G NV T N ++D
Sbjct: 362 ALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVD 420
Query: 309 GFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKP 368
CK ++++EA +F+EM+ + + + +T+ +LIDGL K RV+DA ++ ++M+ +
Sbjct: 421 RLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRT 480
Query: 369 DKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLL 428
+ Y SL+ + G + I ++M + C PD+ T + + KAG E +
Sbjct: 481 NSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMF 540
Query: 429 RSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNG 488
I+ + V ++Y+ +I L + E LF M E+ D Y V G C
Sbjct: 541 EEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK- 599
Query: 489 GGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELIDMVMDKAKFSDRE- 547
G + +A + EM +GF P ++ + +GL + + ++ M+ ++AK E
Sbjct: 600 CGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDR----LDEAYMLFEEAKSKRIEL 655
Query: 548 -----TSMVRGFLKIRKFQDA 563
+S++ GF K+ + +A
Sbjct: 656 NVVIYSSLIDGFGKVGRIDEA 676
Score = 249 bits (635), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 169/604 (27%), Positives = 281/604 (46%), Gaps = 45/604 (7%)
Query: 16 IKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGAL 75
+P S + LI A + + + ++M G P FTTL++G +EG +D AL
Sbjct: 164 FRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSAL 223
Query: 76 RIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGL 135
+ ++M V NV + F K G+++ A F E+ + G PD+ TY +++ L
Sbjct: 224 SLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVL 283
Query: 136 CKVGHVKQALEVMD----------------MMLQEG----FD---------------PDV 160
CK + +A+E+ + M++ G FD P V
Sbjct: 284 CKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSV 343
Query: 161 FTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARV 220
YN +++ L K+G+V+EA+++ +M +D +PN TYN LI LC+ +++ A EL
Sbjct: 344 IAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDS 402
Query: 221 LTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGM 280
+ G+ P+V T N ++ LC + D A +F+EM K C PDE T+ LID L G
Sbjct: 403 MQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGR 462
Query: 281 LEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNT 340
+++A K+ ++M S C N + Y +LI F R E+ +I+ +M Q S + NT
Sbjct: 463 VDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNT 522
Query: 341 LIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNG 400
+D + K+ E + +++ PD +Y+ L+ +AG ++ +M G
Sbjct: 523 YMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQG 582
Query: 401 CEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAM 460
C D Y +I G CK G+V A +LL ++ KG T Y VI L + R EA
Sbjct: 583 CVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAY 642
Query: 461 RLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEG 520
LF E K + + Y + G G I EA + E++++G P ++ L +
Sbjct: 643 MLFEEAKSKRIELNVVIYSSLIDGF-GKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDA 701
Query: 521 LVSLGKEETLVELID--MVMDKAKFSDRETS---MVRGFLKIRKFQDALATFGDILDSRM 575
LV K E + E + M + K + + + ++ G K+RKF A + ++ M
Sbjct: 702 LV---KAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGM 758
Query: 576 PRKT 579
T
Sbjct: 759 KPST 762
Score = 238 bits (606), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 135/426 (31%), Positives = 216/426 (50%)
Query: 11 MVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGN 70
M G+ P+V T NI++ LCK+ ++ A M EEM PDE TF +L+ GL + G
Sbjct: 403 MQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGR 462
Query: 71 LDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNT 130
+D A ++ E+M++ C ++ L+ F GR ED ++M+++ +PD NT
Sbjct: 463 VDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNT 522
Query: 131 LVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRD 190
++ + K G ++ + + + F PD +Y+ LI GL K G E E+ M +
Sbjct: 523 YMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQG 582
Query: 191 CSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAM 250
C +T YN +I CK +V +A +L + +KG P V T+ S+I GL D A
Sbjct: 583 CVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAY 642
Query: 251 ELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGF 310
LF+E K+K + + Y+ LID G ++EA +L+E+ G N+ T+N+L+D
Sbjct: 643 MLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDAL 702
Query: 311 CKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDK 370
K + I EA F M+ + N VTY LI+GLCK R+ A +M +G+KP
Sbjct: 703 VKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPST 762
Query: 371 FTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRS 430
+Y ++++ +AG+I A + +NG PD Y +I GL R A L
Sbjct: 763 ISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEE 822
Query: 431 IQMKGI 436
+ +G+
Sbjct: 823 TRRRGL 828
Score = 197 bits (502), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 135/533 (25%), Positives = 245/533 (45%), Gaps = 19/533 (3%)
Query: 57 TFTTLMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEM 116
++ +L+ + N D +I +M G + T +V G K ++ + +Q M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 117 VSEGFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEV 176
F P Y TL+ V H L + M + G++P V + +LI G K G V
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 177 EEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSL 236
+ A+ +L++M + + YN I + K +V+ A + + + G+ PD T+ S+
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 237 IQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGC 296
I LC + D A+E+F+ ++ P + YN +I S G +EA LL+ + G
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339
Query: 297 ARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQ 356
+V+ YN ++ K+ +++EA ++F+EM+ + + N TYN LID LC++ +++ A +
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFE 398
Query: 357 LMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLC 416
L D M GL P+ T N ++ C++ + A + + M C PD +T+ +LI GL
Sbjct: 399 LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLG 458
Query: 417 KAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDAL 476
K GRV+ A K+ + Y +I+ F R + +++++M+ + PD
Sbjct: 459 KVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQ 518
Query: 477 TYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELIDM 536
+ G P F E+ R F+P+ S+ +L GL+ G EL
Sbjct: 519 LLNTYMDCMFKAGEPEKGRAMFE-EIKARRFVPDARSYSILIHGLIKAGFANETYELFYS 577
Query: 537 VMDKAKFSDRETS--MVRGF---------------LKIRKFQDALATFGDILD 572
+ ++ D ++ GF +K + F+ + T+G ++D
Sbjct: 578 MKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVID 630
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 181/348 (52%)
Query: 8 HADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIE 67
+ DM+++ PD+ N + + KA + M EE+ PD R+++ L+ GLI+
Sbjct: 505 YKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIK 564
Query: 68 EGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFT 127
G + + M E GC++ N+++ GFCK G++ A ++EM ++GF P T
Sbjct: 565 AGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVT 624
Query: 128 YNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMI 187
Y ++++GL K+ + +A + + + + +V Y+SLI G K+G ++EA IL +++
Sbjct: 625 YGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELM 684
Query: 188 LRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFD 247
+ +PN T+N+L+ L K ++ EA + + P+ T+ LI GLC F+
Sbjct: 685 QKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFN 744
Query: 248 VAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLI 307
A +QEM+ +G +P +Y +I L G + EA L +++G + YN +I
Sbjct: 745 KAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMI 804
Query: 308 DGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAA 355
+G R +A +F+E +G+ ++ T L+D L K+ +E AA
Sbjct: 805 EGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAA 852
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 265 bits (678), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 152/482 (31%), Positives = 252/482 (52%), Gaps = 9/482 (1%)
Query: 1 LKLVETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTT 60
++++ + DM G +P+V T+N+L+KALCK +++ A ++ EM G PD ++TT
Sbjct: 162 IQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTT 221
Query: 61 LMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEG 120
++ + E G + + E+ V +V N L++G CKE + A ++EMV +G
Sbjct: 222 VISSMCEVGLVKEGRELAERFEP----VVSV-YNALINGLCKEHDYKGAFELMREMVEKG 276
Query: 121 FNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAV 180
+P+ +Y+TL+N LC G ++ A + ML+ G P+++T +SL+ G G +A+
Sbjct: 277 ISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDAL 336
Query: 181 EILNQMILR-DCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 239
++ NQMI PN + YNTL+ C + +A + + G P++ T+ SLI G
Sbjct: 337 DLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLING 396
Query: 240 LCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARN 299
+ D A+ ++ +M T GC P+ Y ++++LC +EA L++ M CA +
Sbjct: 397 FAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPS 456
Query: 300 VVTYNTLIDGFCKLKRIEEAEEIFDEMEIQG-ISRNSVTYNTLIDGLCKSRRVEDAAQLM 358
V T+N I G C R++ AE++F +ME Q N VTYN L+DGL K+ R+E+A L
Sbjct: 457 VPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLT 516
Query: 359 DQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKA 418
++ M G++ TYN+LL C AG A +V M +G PD +T +I CK
Sbjct: 517 REIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQ 576
Query: 419 GRVEVASKLLRSIQMKGIVLTPQ--AYNPVIQALFRRKRTTEAMRLFREMMEKADPPDAL 476
G+ E A+++L + P +Y VI L R + + L M+ P
Sbjct: 577 GKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIA 636
Query: 477 TY 478
T+
Sbjct: 637 TW 638
Score = 255 bits (651), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 158/520 (30%), Positives = 259/520 (49%), Gaps = 12/520 (2%)
Query: 22 TFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGALRIREQM 81
TF ++I+ L Q+ ++++M G E F +++ + G + A+ + ++
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 137
Query: 82 VEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCKVGHV 141
E GC + N ++ E RI+ ++M +GF P+ FTYN L+ LCK V
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 197
Query: 142 KQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTITYNTL 201
A +++ M +G PD +Y ++IS +C++G V+E E+ + P YN L
Sbjct: 198 DGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF-----EPVVSVYNAL 252
Query: 202 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGC 261
I+ LCKE+ + A EL R + KGI P+V ++++LI LC + ++A +M +GC
Sbjct: 253 INGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGC 312
Query: 262 QPDEFTYNMLIDSLCSRGMLEEALKLLKEM-ESSGCARNVVTYNTLIDGFCKLKRIEEAE 320
P+ +T + L+ RG +AL L +M G NVV YNTL+ GFC I +A
Sbjct: 313 HPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAV 372
Query: 321 EIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYY 380
+F ME G S N TY +LI+G K ++ A + ++M+ G P+ Y +++
Sbjct: 373 SVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEAL 432
Query: 381 CRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTP 440
CR K A +++ M+ C P + T+ I GLC AGR++ A K+ R QM+ P
Sbjct: 433 CRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFR--QMEQQHRCP 490
Query: 441 Q---AYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVD 497
YN ++ L + R EA L RE+ + + TY + G CN G P G A+
Sbjct: 491 PNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLP-GIALQ 549
Query: 498 FVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELIDMV 537
V +M+ G P+ + M+ GK E +++D+V
Sbjct: 550 LVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLV 589
Score = 238 bits (606), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 132/400 (33%), Positives = 212/400 (53%), Gaps = 4/400 (1%)
Query: 17 KPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGALR 76
+P VS +N LI LCK H + A +M EM G++P+ +++TL+ L G ++ A
Sbjct: 243 EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFS 302
Query: 77 IREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSE-GFNPDQFTYNTLVNGL 135
QM++ GC T++ LV G G DAL +M+ G P+ YNTLV G
Sbjct: 303 FLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGF 362
Query: 136 CKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNT 195
C G++ +A+ V M + G P++ TY SLI+G K G ++ AV I N+M+ C PN
Sbjct: 363 CSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNV 422
Query: 196 ITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQE 255
+ Y ++ LC+ ++ +EA L +++ + P V TFN+ I+GLC D A ++F++
Sbjct: 423 VVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQ 482
Query: 256 MKTKG-CQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLK 314
M+ + C P+ TYN L+D L +EEA L +E+ G + TYNTL+ G C
Sbjct: 483 MEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAG 542
Query: 315 RIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIM--EGLKPDKFT 372
A ++ +M + G S + +T N +I CK + E AAQ++D + +PD +
Sbjct: 543 LPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVIS 602
Query: 373 YNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLI 412
Y +++ CR+ + +++ M S G P I T+ LI
Sbjct: 603 YTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLI 642
Score = 189 bits (481), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 124/425 (29%), Positives = 199/425 (46%), Gaps = 42/425 (9%)
Query: 102 KEGRIEDALSFIQEMVSEG-FNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDV 160
+E + AL F + + + F T+ ++ L G V ++ M +GF
Sbjct: 52 QESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSE 111
Query: 161 FTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARV 220
+ S+IS ++G E AVE+ ++ C P+ YN ++ TL EN+++ + R
Sbjct: 112 DLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRD 171
Query: 221 LTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGM 280
+ G P+V T+N L++ LC + D A +L EM KGC PD +Y +I S+C G+
Sbjct: 172 MKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGL 231
Query: 281 LEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNT 340
++E +L + E V YN LI+G CK + A E+ EM +GIS N ++Y+T
Sbjct: 232 VKEGRELAERFEPV-----VSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYST 286
Query: 341 LIDGLCKSRRVE-----------------------------------DAAQLMDQMIME- 364
LI+ LC S ++E DA L +QMI
Sbjct: 287 LINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGF 346
Query: 365 GLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVA 424
GL+P+ YN+L+ +C G+I +A + +M GC P+I TYG+LI G K G ++ A
Sbjct: 347 GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGA 406
Query: 425 SKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRG 484
+ + G Y +++AL R + EA L M ++ P T+ +G
Sbjct: 407 VYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKG 466
Query: 485 LCNGG 489
LC+ G
Sbjct: 467 LCDAG 471
Score = 152 bits (383), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 147/299 (49%), Gaps = 3/299 (1%)
Query: 15 GIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGA 74
G++P+V +N L++ C I A+ + M G +P+ RT+ +L+ G + G+LDGA
Sbjct: 347 GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGA 406
Query: 75 LRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNG 134
+ I +M+ GC V +V C+ + ++A S I+ M E P T+N + G
Sbjct: 407 VYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKG 466
Query: 135 LCKVGHVKQALEVMDMMLQEG-FDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSP 193
LC G + A +V M Q+ P++ TYN L+ GL K +EEA + ++ +R
Sbjct: 467 LCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEW 526
Query: 194 NTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELF 253
++ TYNTL+ C A +L + G PD T N +I C + A ++
Sbjct: 527 SSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML 586
Query: 254 QEMKT--KGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGF 310
+ + +PD +Y +I LC E+ + LL+ M S+G ++ T++ LI+ F
Sbjct: 587 DLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 132/292 (45%), Gaps = 11/292 (3%)
Query: 284 ALKLLKEMESSGCARNV-VTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLI 342
AL K + +S ++ +T+ +I +++ + + +M++QG + + ++I
Sbjct: 59 ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVI 118
Query: 343 DGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCE 402
+ E A ++ ++ G P YN +L I+ + ++M +G E
Sbjct: 119 SVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFE 178
Query: 403 PDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRL 462
P++ TY L+ LCK +V+ A KLL + KG +Y VI ++ E
Sbjct: 179 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG--- 235
Query: 463 FREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLV 522
RE+ E+ +P ++ Y + GLC G A + + EM+E+G P S+ L L
Sbjct: 236 -RELAERFEPVVSV-YNALINGLCKEHDYKG-AFELMREMVEKGISPNVISYSTLINVLC 292
Query: 523 SLGKEETLVELIDMVMDKAKFSDRET--SMVRG-FLKIRKFQDALATFGDIL 571
+ G+ E + ++ + + T S+V+G FL+ F DAL + ++
Sbjct: 293 NSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTF-DALDLWNQMI 343
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 264 bits (674), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 160/440 (36%), Positives = 235/440 (53%), Gaps = 3/440 (0%)
Query: 11 MVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGN 70
M +G P T N ++ L + ++I A + +M + + TF ++ L +EG
Sbjct: 181 MKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGK 240
Query: 71 LDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNT 130
L A M G T VT N LV GF GRIE A I EM S+GF PD TYN
Sbjct: 241 LKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNP 300
Query: 131 LVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRD 190
+++ +C G +A EV+ M + G PD +YN LI G G++E A ++M+ +
Sbjct: 301 ILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQG 357
Query: 191 CSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAM 250
P TYNTLI L EN++E A L R + KGI+ D T+N LI G C + A
Sbjct: 358 MVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAF 417
Query: 251 ELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGF 310
L EM T G QP +FTY LI LC + EA +L +++ G ++V NTL+DG
Sbjct: 418 ALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGH 477
Query: 311 CKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDK 370
C + ++ A + EM++ I+ + VTYN L+ GLC + E+A +LM +M G+KPD
Sbjct: 478 CAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDH 537
Query: 371 FTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRS 430
+YN+L++ Y + GD K A + M S G P ++TY L+ GL K E+A +LLR
Sbjct: 538 ISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLRE 597
Query: 431 IQMKGIVLTPQAYNPVIQAL 450
++ +GIV ++ VI+A+
Sbjct: 598 MKSEGIVPNDSSFCSVIEAM 617
Score = 230 bits (586), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 141/460 (30%), Positives = 238/460 (51%), Gaps = 6/460 (1%)
Query: 71 LDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNT 130
+D A+ M E G T N ++ + RIE+A F +M + +T+N
Sbjct: 171 VDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNI 230
Query: 131 LVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRD 190
++N LCK G +K+A + +M G P + TYN+L+ G G +E A I+++M +
Sbjct: 231 MINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKG 290
Query: 191 CSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAM 250
P+ TYN ++S +C E + A+E+ R + G++PD ++N LI+G + ++A
Sbjct: 291 FQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAF 347
Query: 251 ELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGF 310
EM +G P +TYN LI L +E A L++E+ G + VTYN LI+G+
Sbjct: 348 AYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGY 407
Query: 311 CKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDK 370
C+ ++A + DEM GI TY +LI LC+ + +A +L ++++ +G+KPD
Sbjct: 408 CQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDL 467
Query: 371 FTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRS 430
N+L+ +C G++ RA +++ M PD VTY L+ GLC G+ E A +L+
Sbjct: 468 VMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGE 527
Query: 431 IQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLC-NGG 489
++ +GI +YN +I ++ T A + EM+ P LTY + +GL N
Sbjct: 528 MKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQE 587
Query: 490 GPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEET 529
G + E + + EM G +P SSF + E + +L +++
Sbjct: 588 GELAE--ELLREMKSEGIVPNDSSFCSVIEAMSNLDAKKS 625
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 134/408 (32%), Positives = 215/408 (52%), Gaps = 3/408 (0%)
Query: 8 HADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIE 67
+ADM IK +V TFNI+I LCK +++ A + M +G+ P T+ TL+QG
Sbjct: 213 YADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSL 272
Query: 68 EGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFT 127
G ++GA I +M G T N ++ C EGR + L +EM G PD +
Sbjct: 273 RGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVL---REMKEIGLVPDSVS 329
Query: 128 YNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMI 187
YN L+ G G ++ A D M+++G P +TYN+LI GL ++E A ++ ++
Sbjct: 330 YNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIR 389
Query: 188 LRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFD 247
+ +++TYN LI+ C+ ++A L + + GI P T+ SLI LC +
Sbjct: 390 EKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTR 449
Query: 248 VAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLI 307
A ELF+++ KG +PD N L+D C+ G ++ A LLKEM+ + VTYN L+
Sbjct: 450 EADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLM 509
Query: 308 DGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLK 367
G C + EEA E+ EM+ +GI + ++YNTLI G K + A + D+M+ G
Sbjct: 510 RGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFN 569
Query: 368 PDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGL 415
P TYN+LL + + + A ++++ M S G P+ ++ ++I +
Sbjct: 570 PTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAM 617
Score = 213 bits (543), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 143/456 (31%), Positives = 226/456 (49%), Gaps = 7/456 (1%)
Query: 79 EQMVEHGCLVTNVTV--NVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGLC 136
E ++ H L T T+ ++LV C+ +++A+ M +GF P T N ++ L
Sbjct: 142 ELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLS 201
Query: 137 KVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTI 196
++ ++ A M + +V+T+N +I+ LCK G++++A L M + P +
Sbjct: 202 RLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIV 261
Query: 197 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEM 256
TYNTL+ ++E A + + SKG PD+ T+N ++ +C N A E+ +EM
Sbjct: 262 TYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMC---NEGRASEVLREM 318
Query: 257 KTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRI 316
K G PD +YN+LI + G LE A EM G TYNTLI G +I
Sbjct: 319 KEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKI 378
Query: 317 EEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSL 376
E AE + E+ +GI +SVTYN LI+G C+ + A L D+M+ +G++P +FTY SL
Sbjct: 379 EAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSL 438
Query: 377 LTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGI 436
+ CR + A ++ + + G +PD+V TL+ G C G ++ A LL+ + M I
Sbjct: 439 IYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSI 498
Query: 437 VLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAV 496
YN +++ L + EA L EM + PD ++Y + G G A
Sbjct: 499 NPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGD-TKHAF 557
Query: 497 DFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVE 532
EML GF P ++ L +GL S +E L E
Sbjct: 558 MVRDEMLSLGFNPTLLTYNALLKGL-SKNQEGELAE 592
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 165/304 (54%)
Query: 10 DMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEG 69
+M G+ PD ++NILI+ + A +EM G+ P T+ TL+ GL E
Sbjct: 317 EMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMEN 376
Query: 70 NLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYN 129
++ A + ++ E G ++ +VT N+L++G+C+ G + A + EM+++G P QFTY
Sbjct: 377 KIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYT 436
Query: 130 TLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILR 189
+L+ LC+ ++A E+ + ++ +G PD+ N+L+ G C +G ++ A +L +M +
Sbjct: 437 SLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMM 496
Query: 190 DCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVA 249
+P+ +TYN L+ LC E + EEA EL + +GI PD ++N+LI G + A
Sbjct: 497 SINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHA 556
Query: 250 MELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDG 309
+ EM + G P TYN L+ L E A +LL+EM+S G N ++ ++I+
Sbjct: 557 FMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEA 616
Query: 310 FCKL 313
L
Sbjct: 617 MSNL 620
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 179/382 (46%), Gaps = 8/382 (2%)
Query: 192 SPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAME 251
+ +TI ++ L+ C+ V+EA E ++ KG P T N ++ L + + A
Sbjct: 152 TKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWV 211
Query: 252 LFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFC 311
+ +M + + +T+N++I+ LC G L++A L ME G +VTYNTL+ GF
Sbjct: 212 FYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFS 271
Query: 312 KLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKF 371
RIE A I EM+ +G + TYN ++ +C R A++++ +M GL PD
Sbjct: 272 LRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSV 328
Query: 372 TYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSI 431
+YN L+ GD++ A M G P TY TLI GL ++E A L+R I
Sbjct: 329 SYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREI 388
Query: 432 QMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGP 491
+ KGIVL YN +I + +A L EMM P TY + LC
Sbjct: 389 REKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCR-KNK 447
Query: 492 IGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELIDMVMDKAKFSDRETS-- 549
EA + +++ +G P+ L +G ++G + L+ MD + + +
Sbjct: 448 TREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKE-MDMMSINPDDVTYN 506
Query: 550 -MVRGFLKIRKFQDALATFGDI 570
++RG KF++A G++
Sbjct: 507 CLMRGLCGEGKFEEARELMGEM 528
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 128/234 (54%), Gaps = 3/234 (1%)
Query: 14 RGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDG 73
+GI D T+NILI C+ + A + +EM G+ P + T+T+L+ L +
Sbjct: 391 KGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTRE 450
Query: 74 ALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVN 133
A + E++V G V +N L+ G C G ++ A S ++EM NPD TYN L+
Sbjct: 451 ADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMR 510
Query: 134 GLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSP 193
GLC G ++A E+M M + G PD +YN+LISG K G+ + A + ++M+ +P
Sbjct: 511 GLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNP 570
Query: 194 NTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFD 247
+TYN L+ L K + E A EL R + S+GI+P+ +F S+I+ + SN D
Sbjct: 571 TLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAM---SNLD 621
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 138/277 (49%), Gaps = 6/277 (2%)
Query: 297 ARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQ 356
++ + ++ L+ C+L+ ++EA E F M+ +G + T N ++ L + R+E+A
Sbjct: 152 TKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWV 211
Query: 357 LMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLC 416
M +K + +T+N ++ C+ G +K+A + M G +P IVTY TL+ G
Sbjct: 212 FYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFS 271
Query: 417 KAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDAL 476
GR+E A ++ ++ KG Q YNP++ + R +E + REM E PD++
Sbjct: 272 LRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVL---REMKEIGLVPDSV 328
Query: 477 TYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELIDM 536
+Y + RG C+ G + A + EM+++G +P F ++ L GL K E LI
Sbjct: 329 SYNILIRG-CSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIRE 387
Query: 537 VMDKAKFSDRETS--MVRGFLKIRKFQDALATFGDIL 571
+ +K D T ++ G+ + + A A +++
Sbjct: 388 IREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMM 424
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 263 bits (673), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 147/436 (33%), Positives = 236/436 (54%), Gaps = 1/436 (0%)
Query: 13 SRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLD 72
SR I P + F ++ + K ++ I + +M G++ D +FT L+ L
Sbjct: 73 SRPI-PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLS 131
Query: 73 GALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLV 132
AL + +M++ G + VT+ L++GFC+ R ++A+S + M GF P+ YNT++
Sbjct: 132 LALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVI 191
Query: 133 NGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCS 192
NGLCK + ALEV M ++G D TYN+LISGL G +A +L M+ R
Sbjct: 192 NGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKID 251
Query: 193 PNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMEL 252
PN I + LI T KE + EA L + + + ++P+V T+NSLI G C+ A +
Sbjct: 252 PNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYM 311
Query: 253 FQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCK 312
F M +KGC PD TYN LI C +E+ +KL EM G + TYNTLI G+C+
Sbjct: 312 FDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQ 371
Query: 313 LKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFT 372
++ A+++F+ M G+S + VTYN L+D LC + ++E A +++ + + D T
Sbjct: 372 AGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIIT 431
Query: 373 YNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQ 432
YN ++ CR +K A + +++T G +PD + Y T+I GLC+ G A KL R ++
Sbjct: 432 YNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMK 491
Query: 433 MKGIVLTPQAYNPVIQ 448
G + + + Y+ ++
Sbjct: 492 EDGFMPSERIYDETLR 507
Score = 251 bits (641), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 144/409 (35%), Positives = 216/409 (52%), Gaps = 1/409 (0%)
Query: 102 KEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVF 161
K + + + +M + G + D +++ L++ C+ + AL ++ M++ GF P +
Sbjct: 91 KMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIV 150
Query: 162 TYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVL 221
T SL++G C+ +EAV +++ M PN + YNT+I+ LCK + A E+ +
Sbjct: 151 TLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCM 210
Query: 222 TSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGML 281
KGI D T+N+LI GL + + A L ++M + P+ + LID+ G L
Sbjct: 211 EKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNL 270
Query: 282 EEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTL 341
EA L KEM NV TYN+LI+GFC + +A+ +FD M +G + VTYNTL
Sbjct: 271 LEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTL 330
Query: 342 IDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGC 401
I G CKS+RVED +L +M +GL D FTYN+L+ YC+AG + A + M G
Sbjct: 331 ITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGV 390
Query: 402 EPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMR 461
PDIVTY L+ LC G++E A ++ +Q + + YN +IQ L R + EA
Sbjct: 391 SPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWC 450
Query: 462 LFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPE 510
LFR + K PDA+ Y + GLC G EA M E GF+P
Sbjct: 451 LFRSLTRKGVKPDAIAYITMISGLCRKGLQ-READKLCRRMKEDGFMPS 498
Score = 250 bits (639), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 149/442 (33%), Positives = 236/442 (53%), Gaps = 4/442 (0%)
Query: 42 MMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFC 101
M++ P P FT ++ + + D + + +M G + +L+H FC
Sbjct: 70 MLQSRP----IPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFC 125
Query: 102 KEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVF 161
+ R+ AL+ + +M+ GF P T +L+NG C+ ++A+ ++D M GF P+V
Sbjct: 126 RCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVV 185
Query: 162 TYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVL 221
YN++I+GLCK ++ A+E+ M + + +TYNTLIS L + +A L R +
Sbjct: 186 IYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDM 245
Query: 222 TSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGML 281
+ I P+V F +LI N A L++EM + P+ FTYN LI+ C G L
Sbjct: 246 VKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCL 305
Query: 282 EEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTL 341
+A + M S GC +VVTYNTLI GFCK KR+E+ ++F EM QG+ ++ TYNTL
Sbjct: 306 GDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTL 365
Query: 342 IDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGC 401
I G C++ ++ A ++ ++M+ G+ PD TYN LL C G I++A +V+++ +
Sbjct: 366 IHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEM 425
Query: 402 EPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMR 461
+ DI+TY +I GLC+ +++ A L RS+ KG+ AY +I L R+ EA +
Sbjct: 426 DVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADK 485
Query: 462 LFREMMEKADPPDALTYKHVFR 483
L R M E P Y R
Sbjct: 486 LCRRMKEDGFMPSERIYDETLR 507
Score = 235 bits (600), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 114/367 (31%), Positives = 208/367 (56%)
Query: 11 MVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGN 70
M+ G +P + T L+ C+ ++ + A+ +++ M G+G P+ + T++ GL + +
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199
Query: 71 LDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNT 130
L+ AL + M + G VT N L+ G GR DA +++MV +P+ +
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 259
Query: 131 LVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRD 190
L++ K G++ +A + M++ P+VFTYNSLI+G C G + +A + + M+ +
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 319
Query: 191 CSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAM 250
C P+ +TYNTLI+ CK +VE+ +L +T +G++ D T+N+LI G C +VA
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 379
Query: 251 ELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGF 310
++F M G PD TYN+L+D LC+ G +E+AL ++++++ S +++TYN +I G
Sbjct: 380 KVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGL 439
Query: 311 CKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDK 370
C+ +++EA +F + +G+ +++ Y T+I GLC+ +A +L +M +G P +
Sbjct: 440 CRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSE 499
Query: 371 FTYNSLL 377
Y+ L
Sbjct: 500 RIYDETL 506
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 139/260 (53%)
Query: 10 DMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEG 69
DMV R I P+V F LI K + A + +EM + P+ T+ +L+ G G
Sbjct: 244 DMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHG 303
Query: 70 NLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYN 129
L A + + MV GC VT N L+ GFCK R+ED + EM +G D FTYN
Sbjct: 304 CLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYN 363
Query: 130 TLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILR 189
TL++G C+ G + A +V + M+ G PD+ TYN L+ LC G++E+A+ ++ +
Sbjct: 364 TLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKS 423
Query: 190 DCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVA 249
+ + ITYN +I LC+ ++++EA L R LT KG+ PD + ++I GLC A
Sbjct: 424 EMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREA 483
Query: 250 MELFQEMKTKGCQPDEFTYN 269
+L + MK G P E Y+
Sbjct: 484 DKLCRRMKEDGFMPSERIYD 503
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 118/221 (53%)
Query: 8 HADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIE 67
+ +M+ R + P+V T+N LI C + A M + M G PD T+ TL+ G +
Sbjct: 277 YKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCK 336
Query: 68 EGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFT 127
++ +++ +M G + T N L+HG+C+ G++ A MV G +PD T
Sbjct: 337 SKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVT 396
Query: 128 YNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMI 187
YN L++ LC G +++AL +++ + + D D+ TYN +I GLC+ +++EA + +
Sbjct: 397 YNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLT 456
Query: 188 LRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILP 228
+ P+ I Y T+IS LC++ EA +L R + G +P
Sbjct: 457 RKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMP 497
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 263 bits (672), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 154/427 (36%), Positives = 221/427 (51%)
Query: 53 PDERTFTTLMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSF 112
P FT L+ + + D + + EQM G T N+++H C + A F
Sbjct: 81 PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCF 140
Query: 113 IQEMVSEGFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCK 172
+ +M+ GF PD T+ +L+NG C ++ A+ + D +L GF P+V TY +LI LCK
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK 200
Query: 173 LGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCT 232
+ AVE+ NQM PN +TYN L++ LC+ + +A L R + + I P+V T
Sbjct: 201 NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT 260
Query: 233 FNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEME 292
F +LI A EL+ M PD FTY LI+ LC G+L+EA ++ ME
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME 320
Query: 293 SSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVE 352
+GC N V Y TLI GFCK KR+E+ +IF EM +G+ N++TY LI G C R +
Sbjct: 321 RNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPD 380
Query: 353 DAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLI 412
A ++ +QM PD TYN LL C G +++A I + M + +IVTY +I
Sbjct: 381 VAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIII 440
Query: 413 GGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADP 472
G+CK G+VE A L S+ KG+ Y +I RR EA LF++M E
Sbjct: 441 QGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFL 500
Query: 473 PDALTYK 479
P+ YK
Sbjct: 501 PNESVYK 507
Score = 254 bits (648), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 128/365 (35%), Positives = 208/365 (56%)
Query: 9 ADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEE 68
M+ G +PD+ TF L+ C ++I AI + +++ G G P+ T+TTL++ L +
Sbjct: 142 GKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKN 201
Query: 69 GNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTY 128
+L+ A+ + QM +G VT N LV G C+ GR DA +++M+ P+ T+
Sbjct: 202 RHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITF 261
Query: 129 NTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMIL 188
L++ KVG + +A E+ ++M+Q PDVFTY SLI+GLC G ++EA ++ M
Sbjct: 262 TALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMER 321
Query: 189 RDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDV 248
C PN + Y TLI CK +VE+ ++ ++ KG++ + T+ LIQG CL DV
Sbjct: 322 NGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDV 381
Query: 249 AMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLID 308
A E+F +M ++ PD TYN+L+D LC G +E+AL + + M N+VTY +I
Sbjct: 382 AQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQ 441
Query: 309 GFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKP 368
G CKL ++E+A ++F + +G+ N +TY T+I G C+ + +A L +M +G P
Sbjct: 442 GMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLP 501
Query: 369 DKFTY 373
++ Y
Sbjct: 502 NESVY 506
Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 139/458 (30%), Positives = 229/458 (50%), Gaps = 1/458 (0%)
Query: 57 TFTTLMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEM 116
++ +++ + + AL + +MV L + + L+ K R + +S ++M
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 117 VSEGFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEV 176
G P T N +++ +C +A + M++ GF+PD+ T+ SL++G C +
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169
Query: 177 EEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSL 236
E+A+ + +Q++ PN +TY TLI LCK + A EL + + G P+V T+N+L
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 237 IQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGC 296
+ GLC + A L ++M + +P+ T+ LID+ G L EA +L M
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289
Query: 297 ARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQ 356
+V TY +LI+G C ++EA ++F ME G N V Y TLI G CKS+RVED +
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMK 349
Query: 357 LMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLC 416
+ +M +G+ + TY L+ YC G A ++ M+S PDI TY L+ GLC
Sbjct: 350 IFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLC 409
Query: 417 KAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDAL 476
G+VE A + ++ + + + Y +IQ + + + +A LF + K P+ +
Sbjct: 410 CNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVI 469
Query: 477 TYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSF 514
TY + G C G I EA +M E GFLP S +
Sbjct: 470 TYTTMISGFCR-RGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 110/241 (45%), Gaps = 3/241 (1%)
Query: 315 RIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYN 374
+ +A ++F M + + + L+ + K R + L +QM + G+ P T N
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 375 SLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMK 434
++ C + RA+ + M G EPD+VT+ +L+ G C R+E A L I
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 435 GIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGE 494
G Y +I+ L + + A+ LF +M P+ +TY + GLC G G+
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIG-RWGD 241
Query: 495 AVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELIDMVMDKAKFSDRET--SMVR 552
A + +M++R P +F L + V +GK EL ++++ + + D T S++
Sbjct: 242 AAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLIN 301
Query: 553 G 553
G
Sbjct: 302 G 302
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 261 bits (668), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 155/454 (34%), Positives = 235/454 (51%), Gaps = 3/454 (0%)
Query: 18 PDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGALRI 77
P + F L+ + K + I + + + G++ D T LM + A
Sbjct: 70 PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSF 129
Query: 78 REQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCK 137
+M++ G VT L++GFC R+E+A+S + +MV G PD Y T+++ LCK
Sbjct: 130 LGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCK 189
Query: 138 VGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTIT 197
GHV AL + D M G PDV Y SL++GLC G +A +L M R P+ IT
Sbjct: 190 NGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVIT 249
Query: 198 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMK 257
+N LI KE + +A EL + I P++ T+ SLI G C+ D A ++F M+
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309
Query: 258 TKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIE 317
TKGC PD Y LI+ C +++A+K+ EM G N +TY TLI GF ++ +
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPN 369
Query: 318 EAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI---MEGLKPDKFTYN 374
A+E+F M +G+ N TYN L+ LC + +V+ A + + M M+G+ P+ +TYN
Sbjct: 370 VAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYN 429
Query: 375 SLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMK 434
LL C G +++A + ++M + I+TY +I G+CKAG+V+ A L S+ K
Sbjct: 430 VLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSK 489
Query: 435 GIVLTPQAYNPVIQALFRRKRTTEAMRLFREMME 468
G+ Y +I LFR EA LFR+M E
Sbjct: 490 GVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKE 523
Score = 251 bits (641), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 143/447 (31%), Positives = 238/447 (53%), Gaps = 7/447 (1%)
Query: 42 MMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFC 101
M+E P P FT L+ + + D + + + + G T N+L++ FC
Sbjct: 63 MVESRP----LPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFC 118
Query: 102 KEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVF 161
+ + A SF+ +M+ GF PD T+ +L+NG C +++A+ +++ M++ G PDV
Sbjct: 119 QSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVV 178
Query: 162 TYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVL 221
Y ++I LCK G V A+ + +QM P+ + Y +L++ LC + +A L R +
Sbjct: 179 MYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM 238
Query: 222 TSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGML 281
T + I PDV TFN+LI F A EL+ EM P+ FTY LI+ C G +
Sbjct: 239 TKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCV 298
Query: 282 EEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTL 341
+EA ++ ME+ GC +VV Y +LI+GFCK K++++A +IF EM +G++ N++TY TL
Sbjct: 299 DEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTL 358
Query: 342 IDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTS--- 398
I G + + A ++ M+ G+ P+ TYN LL C G +K+A I ++M
Sbjct: 359 IQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREM 418
Query: 399 NGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTE 458
+G P+I TY L+ GLC G++E A + ++ + + + Y +IQ + + +
Sbjct: 419 DGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKN 478
Query: 459 AMRLFREMMEKADPPDALTYKHVFRGL 485
A+ LF + K P+ +TY + GL
Sbjct: 479 AVNLFCSLPSKGVKPNVVTYTTMISGL 505
Score = 247 bits (630), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 141/425 (33%), Positives = 220/425 (51%), Gaps = 3/425 (0%)
Query: 15 GIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGA 74
G+ D+ T N+L+ C++ Q A + +M G PD TFT+L+ G ++ A
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 75 LRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNG 134
+ + QMVE G V ++ CK G + ALS +M + G PD Y +LVNG
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221
Query: 135 LCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPN 194
LC G + A ++ M + PDV T+N+LI K G+ +A E+ N+MI +PN
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281
Query: 195 TITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQ 254
TY +LI+ C E V+EA ++ ++ +KG PDV + SLI G C D AM++F
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFY 341
Query: 255 EMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLK 314
EM KG + TY LI G A ++ M S G N+ TYN L+ C
Sbjct: 342 EMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNG 401
Query: 315 RIEEAEEIFDEM---EIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKF 371
++++A IF++M E+ G++ N TYN L+ GLC + ++E A + + M +
Sbjct: 402 KVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGII 461
Query: 372 TYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSI 431
TY ++ C+AG +K A ++ ++ S G +P++VTY T+I GL + G A L R +
Sbjct: 462 TYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Query: 432 QMKGI 436
+ G+
Sbjct: 522 KEDGV 526
Score = 228 bits (581), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 138/462 (29%), Positives = 234/462 (50%), Gaps = 5/462 (1%)
Query: 74 ALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVN 133
AL + MVE L + + L++ K + + ++ + G + D +T N L+N
Sbjct: 56 ALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMN 115
Query: 134 GLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSP 193
C+ A + M++ GF+PD+ T+ SLI+G C +EEA+ ++NQM+ P
Sbjct: 116 CFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKP 175
Query: 194 NTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELF 253
+ + Y T+I +LCK V A L + + GI PDV + SL+ GLC + + A L
Sbjct: 176 DVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLL 235
Query: 254 QEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKL 313
+ M + +PD T+N LID+ G +A +L EM A N+ TY +LI+GFC
Sbjct: 236 RGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCME 295
Query: 314 KRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTY 373
++EA ++F ME +G + V Y +LI+G CK ++V+DA ++ +M +GL + TY
Sbjct: 296 GCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITY 355
Query: 374 NSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQ- 432
+L+ + + G A ++ +M S G P+I TY L+ LC G+V+ A + +Q
Sbjct: 356 TTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQK 415
Query: 433 --MKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGG 490
M G+ YN ++ L + +A+ +F +M ++ +TY + +G+C G
Sbjct: 416 REMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCK-AG 474
Query: 491 PIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLG-KEETLV 531
+ AV+ + +G P ++ + GL G K E V
Sbjct: 475 KVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHV 516
Score = 209 bits (532), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 119/359 (33%), Positives = 194/359 (54%), Gaps = 3/359 (0%)
Query: 11 MVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGN 70
MV GIKPDV + +I +LCK + A+ + ++M YG+ PD +T+L+ GL G
Sbjct: 168 MVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGR 227
Query: 71 LDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNT 130
A + M + +T N L+ F KEG+ DA EM+ P+ FTY +
Sbjct: 228 WRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTS 287
Query: 131 LVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRD 190
L+NG C G V +A ++ +M +G PDV Y SLI+G CK +V++A++I +M +
Sbjct: 288 LINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG 347
Query: 191 CSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAM 250
+ NTITY TLI + + A E+ + S+G+ P++ T+N L+ LC A+
Sbjct: 348 LTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKAL 407
Query: 251 ELFQEMKTK---GCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLI 307
+F++M+ + G P+ +TYN+L+ LC G LE+AL + ++M ++TY +I
Sbjct: 408 MIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIII 467
Query: 308 DGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGL 366
G CK +++ A +F + +G+ N VTY T+I GL + +A L +M +G+
Sbjct: 468 QGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 204/410 (49%), Gaps = 6/410 (1%)
Query: 131 LVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRD 190
L NGL + +AL++ M++ P + + L++ + K+ + + + + + + +
Sbjct: 44 LRNGLHSL-QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMG 102
Query: 191 CSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAM 250
S + T N L++ C+ +Q A+ + G PD+ TF SLI G CL + + AM
Sbjct: 103 VSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAM 162
Query: 251 ELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGF 310
+ +M G +PD Y +IDSLC G + AL L +ME+ G +VV Y +L++G
Sbjct: 163 SMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGL 222
Query: 311 CKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDK 370
C R +A+ + M + I + +T+N LID K + DA +L ++MI + P+
Sbjct: 223 CNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNI 282
Query: 371 FTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRS 430
FTY SL+ +C G + A + M + GC PD+V Y +LI G CK +V+ A K+
Sbjct: 283 FTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE 342
Query: 431 IQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGG 490
+ KG+ Y +IQ + + A +F M+ + PP+ TY + LC G
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCY-NG 401
Query: 491 PIGEAVDFVIEMLER---GFLPEFSSFYMLAEGLVSLGK-EETLVELIDM 536
+ +A+ +M +R G P ++ +L GL GK E+ L+ DM
Sbjct: 402 KVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM 451
Score = 196 bits (497), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 191/388 (49%), Gaps = 3/388 (0%)
Query: 105 RIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYN 164
+ +AL MV P + L+N + K+ + + D + G D++T N
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 165 SLISGLCKLGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSK 224
L++ C+ + A L +M+ P+ +T+ +LI+ C N++EEA + +
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 225 GILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEA 284
GI PDV + ++I LC + + A+ LF +M+ G +PD Y L++ LC+ G +A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 285 LKLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDG 344
LL+ M +V+T+N LID F K + +AEE+++EM I+ N TY +LI+G
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 345 LCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPD 404
C V++A Q+ M +G PD Y SL+ +C+ + A I M+ G +
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Query: 405 IVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFR 464
+TY TLI G + G+ VA ++ + +G+ + YN ++ L + +A+ +F
Sbjct: 352 TITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFE 411
Query: 465 EMMEK---ADPPDALTYKHVFRGLCNGG 489
+M ++ P+ TY + GLC G
Sbjct: 412 DMQKREMDGVAPNIWTYNVLLHGLCYNG 439
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 168/366 (45%), Gaps = 3/366 (0%)
Query: 213 EATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLI 272
+A +R+L + C + +++ + F+ A++LF M P + L+
Sbjct: 20 KALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLL 79
Query: 273 DSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGIS 332
+ + + + L ++ G + ++ T N L++ FC+ + A +M G
Sbjct: 80 NVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFE 139
Query: 333 RNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADI 392
+ VT+ +LI+G C R+E+A +++QM+ G+KPD Y +++ C+ G + A +
Sbjct: 140 PDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSL 199
Query: 393 VQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFR 452
M + G PD+V Y +L+ GLC +GR A LLR + + I +N +I A +
Sbjct: 200 FDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVK 259
Query: 453 RKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFS 512
+ +A L+ EM+ + P+ TY + G C G + EA M +G P+
Sbjct: 260 EGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGC-VDEARQMFYLMETKGCFPDVV 318
Query: 513 SFYMLAEGLVSLGKEETLVELIDMVMDKAKFSD--RETSMVRGFLKIRKFQDALATFGDI 570
++ L G K + +++ + K + T++++GF ++ K A F +
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378
Query: 571 LDSRMP 576
+ +P
Sbjct: 379 VSRGVP 384
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 125/281 (44%), Gaps = 7/281 (2%)
Query: 278 RGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVT 337
+G +AL + ++ S R Y ++ + EA ++F M + +
Sbjct: 15 KGNSGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIID 74
Query: 338 YNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMT 397
+ L++ + K ++ + L D + + G+ D +T N L+ +C++ A+ + M
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134
Query: 398 SNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTT 457
G EPDIVT+ +LI G C R+E A ++ + GI Y +I +L +
Sbjct: 135 KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVN 194
Query: 458 EAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYML 517
A+ LF +M PD + Y + GLCN G +A + M +R P+ +F L
Sbjct: 195 YALSLFDQMENYGIRPDVVMYTSLVNGLCN-SGRWRDADSLLRGMTKRKIKPDVITFNAL 253
Query: 518 AEGLVSLGK----EETLVELIDMVMDKAKFSDRETSMVRGF 554
+ V GK EE E+I M + F+ TS++ GF
Sbjct: 254 IDAFVKEGKFLDAEELYNEMIRMSIAPNIFT--YTSLINGF 292
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 90/156 (57%), Gaps = 3/156 (1%)
Query: 3 LVETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGY---GLAPDERTFT 59
+ + + MVSRG+ P++ T+N+L+ LC +++ A+++ E+M G+AP+ T+
Sbjct: 370 VAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYN 429
Query: 60 TLMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSE 119
L+ GL G L+ AL + E M + + +T +++ G CK G++++A++ + S+
Sbjct: 430 VLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSK 489
Query: 120 GFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEG 155
G P+ TY T+++GL + G +A + M ++G
Sbjct: 490 GVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 261 bits (666), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 168/540 (31%), Positives = 268/540 (49%), Gaps = 40/540 (7%)
Query: 16 IKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGAL 75
I P V +N+LI LCK ++ A + +EM L P T+ TL+ G + GN + +
Sbjct: 210 IYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSF 269
Query: 76 RIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTL---- 131
++RE+M + +T N L+ G K G +EDA + ++EM GF PD FT++ L
Sbjct: 270 KVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGY 329
Query: 132 -------------------------------VNGLCKVGHVKQALEVMDMMLQEGFDPDV 160
+N LCK G +++A E++ + +G P+
Sbjct: 330 SSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNE 389
Query: 161 FTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARV 220
YN++I G C+ G++ A + M + P+ + YN LI C+ ++E A +
Sbjct: 390 VIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNK 449
Query: 221 LTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGM 280
+ KG+ P V T+N LI G FD ++ +EM+ G P+ +Y LI+ LC
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509
Query: 281 LEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNT 340
L EA + ++ME G + V YN LIDG C +IE+A EM +GI N VTYNT
Sbjct: 510 LLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNT 569
Query: 341 LIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNG 400
LIDGL + ++ +A L+ ++ +GLKPD FTYNSL++ Y AG+++R + + M +G
Sbjct: 570 LIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSG 629
Query: 401 CEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAM 460
+P + TY LI LC +E+ +L + +K +L YN V+ +A
Sbjct: 630 IKPTLKTYHLLI-SLCTKEGIELTERLFGEMSLKPDLLV---YNGVLHCYAVHGDMEKAF 685
Query: 461 RLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEG 520
L ++M+EK+ D TY + G G + E + EM R PE ++ ++ +G
Sbjct: 686 NLQKQMIEKSIGLDKTTYNSLILGQLK-VGKLCEVRSLIDEMNAREMEPEADTYNIIVKG 744
Score = 236 bits (603), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 152/495 (30%), Positives = 238/495 (48%), Gaps = 39/495 (7%)
Query: 11 MVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGN 70
M + I+P + TFN L+K L KA + A +++EM G PD TF+ L G
Sbjct: 275 MKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEK 334
Query: 71 LDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNT 130
+ AL + E V+ G + T ++L++ CKEG+IE A + +++G P++ YNT
Sbjct: 335 AEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNT 394
Query: 131 LVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRD 190
+++G C+ G + A ++ M ++G PD YN LI C+LGE+E A + +N+M L+
Sbjct: 395 MIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKG 454
Query: 191 CSP-----------------------------------NTITYNTLISTLCKENQVEEAT 215
SP N ++Y TLI+ LCK +++ EA
Sbjct: 455 VSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQ 514
Query: 216 ELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSL 275
+ R + +G+ P V +N LI G C + A +EM KG + + TYN LID L
Sbjct: 515 IVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGL 574
Query: 276 CSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNS 335
G L EA LL E+ G +V TYN+LI G+ ++ +++EM+ GI
Sbjct: 575 SMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTL 634
Query: 336 VTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQN 395
TY+ LI LC +E +L +M LKPD YN +L Y GD+++A ++ +
Sbjct: 635 KTYHLLI-SLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQ 690
Query: 396 MTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKR 455
M D TY +LI G K G++ L+ + + + YN +++ K
Sbjct: 691 MIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKD 750
Query: 456 TTEAMRLFREMMEKA 470
A +REM EK
Sbjct: 751 YMSAYVWYREMQEKG 765
Score = 231 bits (588), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 162/596 (27%), Positives = 282/596 (47%), Gaps = 44/596 (7%)
Query: 10 DMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEG 69
+++ +P + I+A K + + + M + P + L+ GL +
Sbjct: 169 NILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGK 228
Query: 70 NLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYN 129
++ A ++ ++M+ L + +T N L+ G+CK G E + + M ++ P T+N
Sbjct: 229 RMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFN 288
Query: 130 TLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISG-------------------- 169
TL+ GL K G V+ A V+ M GF PD FT++ L G
Sbjct: 289 TLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDS 348
Query: 170 ---------------LCKLGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEA 214
LCK G++E+A EIL + + + PN + YNT+I C++ + A
Sbjct: 349 GVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGA 408
Query: 215 TELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDS 274
+ +G+ PD +N LI+ C + A + +MK KG P TYN+LI
Sbjct: 409 RMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGG 468
Query: 275 LCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRN 334
+ ++ +LKEME +G NVV+Y TLI+ CK ++ EA+ + +ME +G+S
Sbjct: 469 YGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPK 528
Query: 335 SVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQ 394
YN LIDG C ++EDA + +M+ +G++ + TYN+L+ G + A D++
Sbjct: 529 VRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLL 588
Query: 395 NMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRK 454
++ G +PD+ TY +LI G AG V+ L ++ GI T + Y+ +I +L ++
Sbjct: 589 EISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKE 647
Query: 455 RTTEAMRLFREMMEKADPPDALTYKHVFRGLCNG-GGPIGEAVDFVIEMLERGFLPEFSS 513
RLF EM K PD L Y V C G + +A + +M+E+ + ++
Sbjct: 648 GIELTERLFGEMSLK---PDLLVYNGVLH--CYAVHGDMEKAFNLQKQMIEKSIGLDKTT 702
Query: 514 FYMLAEGLVSLGKEETLVELIDMVMDKAKFSDRETS--MVRGFLKIRKFQDALATF 567
+ L G + +GK + LID + + + +T +V+G +++ + A +
Sbjct: 703 YNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWY 758
Score = 228 bits (581), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 140/510 (27%), Positives = 253/510 (49%), Gaps = 2/510 (0%)
Query: 11 MVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGN 70
+ S +K D S + +L L ++ I A + + G+ P + T L+ L++
Sbjct: 101 LSSPSLKHDFS-YLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQ 159
Query: 71 LDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNT 130
+ + ++E + + K + L M + P F YN
Sbjct: 160 FRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNV 219
Query: 131 LVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRD 190
L++GLCK + A ++ D ML P + TYN+LI G CK G E++ ++ +M
Sbjct: 220 LIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADH 279
Query: 191 CSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAM 250
P+ IT+NTL+ L K VE+A + + + G +PD TF+ L G + A+
Sbjct: 280 IEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAAL 339
Query: 251 ELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGF 310
+++ G + + +T ++L+++LC G +E+A ++L + G N V YNT+IDG+
Sbjct: 340 GVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGY 399
Query: 311 CKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDK 370
C+ + A + ME QG+ + + YN LI C+ +E+A + +++M ++G+ P
Sbjct: 400 CRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSV 459
Query: 371 FTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRS 430
TYN L+ Y R + + DI++ M NG P++V+YGTLI LCK ++ A + R
Sbjct: 460 ETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRD 519
Query: 431 IQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGG 490
++ +G+ + YN +I + + +A R +EM++K + +TY + GL + G
Sbjct: 520 MEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGL-SMTG 578
Query: 491 PIGEAVDFVIEMLERGFLPEFSSFYMLAEG 520
+ EA D ++E+ +G P+ ++ L G
Sbjct: 579 KLSEAEDLLLEISRKGLKPDVFTYNSLISG 608
Score = 162 bits (410), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 175/351 (49%), Gaps = 4/351 (1%)
Query: 11 MVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGN 70
M +G+ P V T+NILI + ++ +++EM G P+ ++ TL+ L +
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509
Query: 71 LDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNT 130
L A ++ M + G N+L+ G C +G+IEDA F +EM+ +G + TYNT
Sbjct: 510 LLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNT 569
Query: 131 LVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRD 190
L++GL G + +A +++ + ++G PDVFTYNSLISG G V+ + + +M
Sbjct: 570 LIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSG 629
Query: 191 CSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAM 250
P TY+ LIS KE E TE R+ + PD+ +N ++ + + + A
Sbjct: 630 IKPTLKTYHLLISLCTKEGI--ELTE--RLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAF 685
Query: 251 ELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGF 310
L ++M K D+ TYN LI G L E L+ EM + TYN ++ G
Sbjct: 686 NLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGH 745
Query: 311 CKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 361
C++K A + EM+ +G + N L+ GL + R ++A ++ +M
Sbjct: 746 CEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 156/317 (49%), Gaps = 4/317 (1%)
Query: 10 DMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEG 69
+M G P+V ++ LI LCK ++ A ++ +M G++P R + L+ G +G
Sbjct: 484 EMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKG 543
Query: 70 NLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYN 129
++ A R ++M++ G + VT N L+ G G++ +A + E+ +G PD FTYN
Sbjct: 544 KIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYN 603
Query: 130 TLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILR 189
+L++G G+V++ + + + M + G P + TY+ LIS LC +E + +M L+
Sbjct: 604 SLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS-LCTKEGIELTERLFGEMSLK 662
Query: 190 DCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVA 249
P+ + YN ++ +E+A L + + K I D T+NSLI G
Sbjct: 663 ---PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEV 719
Query: 250 MELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDG 309
L EM + +P+ TYN+++ C A +EM+ G +V N L+ G
Sbjct: 720 RSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSG 779
Query: 310 FCKLKRIEEAEEIFDEM 326
+ R +EAE + EM
Sbjct: 780 LKEEWRSKEAEIVISEM 796
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 89/179 (49%), Gaps = 4/179 (2%)
Query: 8 HADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIE 67
+ +M GIKP + T+++LI +LC I + EM L PD + ++
Sbjct: 622 YEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAV 677
Query: 68 EGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFT 127
G+++ A +++QM+E + T N L+ G K G++ + S I EM + P+ T
Sbjct: 678 HGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADT 737
Query: 128 YNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQM 186
YN +V G C+V A M ++GF DV N L+SGL + +EA ++++M
Sbjct: 738 YNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 261 bits (666), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 149/472 (31%), Positives = 242/472 (51%), Gaps = 1/472 (0%)
Query: 4 VETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQ 63
V+ DM+ G +P V T+NI+I +CK + A + EEM GL PD T+ +++
Sbjct: 246 VKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMID 305
Query: 64 GLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNP 123
G + G LD + E+M + C +T N L++ FCK G++ L F +EM G P
Sbjct: 306 GFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKP 365
Query: 124 DQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEIL 183
+ +Y+TLV+ CK G ++QA++ M + G P+ +TY SLI CK+G + +A +
Sbjct: 366 NVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLG 425
Query: 184 NQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLT 243
N+M+ N +TY LI LC +++EA EL + + G++P++ ++N+LI G
Sbjct: 426 NEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKA 485
Query: 244 SNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTY 303
N D A+EL E+K +G +PD Y I LCS +E A ++ EM+ G N + Y
Sbjct: 486 KNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIY 545
Query: 304 NTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIM 363
TL+D + K E + DEM+ I VT+ LIDGLCK++ V A +++
Sbjct: 546 TTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISN 605
Query: 364 E-GLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVE 422
+ GL+ + + +++ C+ ++ A + + M G PD Y +L+ G K G V
Sbjct: 606 DFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVL 665
Query: 423 VASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPD 474
A L + G+ L AY ++ L + +A EM+ + PD
Sbjct: 666 EALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717
Score = 244 bits (624), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 153/526 (29%), Positives = 262/526 (49%), Gaps = 20/526 (3%)
Query: 46 MPGYGLAPDERTFTTLMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGR 105
+PG+G+ F L LI+ G L+ A++ +M + N L+H F K G+
Sbjct: 189 VPGFGV------FDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGK 242
Query: 106 IEDALSFIQEMVSEGFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNS 165
+D F ++M+ G P FTYN +++ +CK G V+ A + + M G PD TYNS
Sbjct: 243 TDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNS 302
Query: 166 LISGLCKLGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKG 225
+I G K+G +++ V +M C P+ ITYN LI+ CK ++ E R + G
Sbjct: 303 MIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNG 362
Query: 226 ILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEAL 285
+ P+V ++++L+ C A++ + +M+ G P+E+TY LID+ C G L +A
Sbjct: 363 LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAF 422
Query: 286 KLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGL 345
+L EM G NVVTY LIDG C +R++EAEE+F +M+ G+ N +YN LI G
Sbjct: 423 RLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGF 482
Query: 346 CKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDI 405
K++ ++ A +L++++ G+KPD Y + + C I+ A ++ M G + +
Sbjct: 483 VKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANS 542
Query: 406 VTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFRE 465
+ Y TL+ K+G LL ++ I +T + +I L + K ++A+ F
Sbjct: 543 LIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNR 602
Query: 466 MMEKAD-PPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEG---- 520
+ +A + + GLC + A +M+++G +P+ +++ L +G
Sbjct: 603 ISNDFGLQANAAIFTAMIDGLCK-DNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQ 661
Query: 521 ---LVSLGKEETLVELIDMVMDKAKFSDRETSMVRGFLKIRKFQDA 563
L +L + + E I M +D + TS+V G + Q A
Sbjct: 662 GNVLEALALRDKMAE-IGMKLDLLAY----TSLVWGLSHCNQLQKA 702
Score = 239 bits (610), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 148/505 (29%), Positives = 241/505 (47%), Gaps = 2/505 (0%)
Query: 18 PDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGALRI 77
P F+ L L + AI +M + + P R+ L+ + G D R
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 78 REQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCK 137
+ M+ G T T N+++ CKEG +E A +EM G PD TYN++++G K
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 138 VGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTIT 197
VG + + + M +PDV TYN+LI+ CK G++ +E +M PN ++
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 198 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMK 257
Y+TL+ CKE +++A + + G++P+ T+ SLI C N A L EM
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 258 TKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIE 317
G + + TY LID LC ++EA +L +M+++G N+ +YN LI GF K K ++
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489
Query: 318 EAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLL 377
A E+ +E++ +GI + + Y T I GLC ++E A +M++M G+K + Y +L+
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 549
Query: 378 TYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMK-GI 436
Y ++G+ ++ M E +VT+ LI GLCK V A I G+
Sbjct: 550 DAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGL 609
Query: 437 VLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAV 496
+ +I L + + A LF +M++K PD Y + G G + EA+
Sbjct: 610 QANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVL-EAL 668
Query: 497 DFVIEMLERGFLPEFSSFYMLAEGL 521
+M E G + ++ L GL
Sbjct: 669 ALRDKMAEIGMKLDLLAYTSLVWGL 693
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 192/386 (49%), Gaps = 1/386 (0%)
Query: 8 HADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIE 67
+ +M G+KP+V +++ L+ A CK ++ AI +M GL P+E T+T+L+ +
Sbjct: 355 YREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCK 414
Query: 68 EGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFT 127
GNL A R+ +M++ G VT L+ G C R+++A +M + G P+ +
Sbjct: 415 IGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLAS 474
Query: 128 YNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMI 187
YN L++G K ++ +ALE+++ + G PD+ Y + I GLC L ++E A ++N+M
Sbjct: 475 YNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMK 534
Query: 188 LRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFD 247
N++ Y TL+ K E L + I V TF LI GLC
Sbjct: 535 ECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVS 594
Query: 248 VAMELFQEMKTK-GCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTL 306
A++ F + G Q + + +ID LC +E A L ++M G + Y +L
Sbjct: 595 KAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSL 654
Query: 307 IDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGL 366
+DG K + EA + D+M G+ + + Y +L+ GL +++ A +++MI EG+
Sbjct: 655 MDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGI 714
Query: 367 KPDKFTYNSLLTYYCRAGDIKRAADI 392
PD+ S+L + G I A ++
Sbjct: 715 HPDEVLCISVLKKHYELGCIDEAVEL 740
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 148/332 (44%), Gaps = 35/332 (10%)
Query: 191 CSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAM 250
C P ++ L S L +EEA + + + P + N L+ D
Sbjct: 188 CVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVK 247
Query: 251 ELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSG--------------- 295
F++M G +P FTYN++ID +C G +E A L +EM+ G
Sbjct: 248 RFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF 307
Query: 296 --------------------CARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNS 335
C +V+TYN LI+ FCK ++ E + EM+ G+ N
Sbjct: 308 GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNV 367
Query: 336 VTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQN 395
V+Y+TL+D CK ++ A + M GL P+++TY SL+ C+ G++ A +
Sbjct: 368 VSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNE 427
Query: 396 MTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKR 455
M G E ++VTY LI GLC A R++ A +L + G++ +YN +I + K
Sbjct: 428 MLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKN 487
Query: 456 TTEAMRLFREMMEKADPPDALTYKHVFRGLCN 487
A+ L E+ + PD L Y GLC+
Sbjct: 488 MDRALELLNELKGRGIKPDLLLYGTFIWGLCS 519
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 134/288 (46%), Gaps = 1/288 (0%)
Query: 1 LKLVETAHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTT 60
+K E M + G+ P+++++N LI KA + A+ ++ E+ G G+ PD + T
Sbjct: 453 MKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGT 512
Query: 61 LMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEG 120
+ GL ++ A + +M E G ++ L+ + K G + L + EM
Sbjct: 513 FIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELD 572
Query: 121 FNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQE-GFDPDVFTYNSLISGLCKLGEVEEA 179
T+ L++GLCK V +A++ + + + G + + ++I GLCK +VE A
Sbjct: 573 IEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAA 632
Query: 180 VEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 239
+ QM+ + P+ Y +L+ K+ V EA L + G+ D+ + SL+ G
Sbjct: 633 TTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWG 692
Query: 240 LCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKL 287
L + A +EM +G PDE ++ G ++EA++L
Sbjct: 693 LSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 114/254 (44%), Gaps = 36/254 (14%)
Query: 10 DMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEG 69
++ RGIKPD+ + I LC +I A ++M EM G+ + +TTLM + G
Sbjct: 497 ELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSG 556
Query: 70 NLDGALRIREQMVEHGCLVTNVTVNVLVHGFCK--------------------------- 102
N L + ++M E VT VT VL+ G CK
Sbjct: 557 NPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIF 616
Query: 103 ---------EGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQ 153
+ ++E A + ++MV +G PD+ Y +L++G K G+V +AL + D M +
Sbjct: 617 TAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAE 676
Query: 154 EGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEE 213
G D+ Y SL+ GL ++++A L +MI P+ + +++ + ++E
Sbjct: 677 IGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDE 736
Query: 214 ATELARVLTSKGIL 227
A EL L +L
Sbjct: 737 AVELQSYLMKHQLL 750
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 44/80 (55%)
Query: 11 MVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGN 70
M G+K D+ + L+ L +Q++ A +EEM G G+ PDE ++++ E G
Sbjct: 674 MAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGC 733
Query: 71 LDGALRIREQMVEHGCLVTN 90
+D A+ ++ +++H L ++
Sbjct: 734 IDEAVELQSYLMKHQLLTSD 753
Score = 40.4 bits (93), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 39/206 (18%), Positives = 79/206 (38%), Gaps = 21/206 (10%)
Query: 326 MEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGD 385
M G + +Y + L +R DA ++ +M++ D F
Sbjct: 133 MTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVF-------------- 178
Query: 386 IKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNP 445
D++ + T N C P + L L G +E A + ++ + ++ N
Sbjct: 179 -----DVLWS-TRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNG 232
Query: 446 VIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLER 505
++ + +T + R F++M+ P TY + +C G + A EM R
Sbjct: 233 LLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCK-EGDVEAARGLFEEMKFR 291
Query: 506 GFLPEFSSFYMLAEGLVSLGKEETLV 531
G +P+ ++ + +G +G+ + V
Sbjct: 292 GLVPDTVTYNSMIDGFGKVGRLDDTV 317
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 260 bits (665), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 153/457 (33%), Positives = 237/457 (51%), Gaps = 9/457 (1%)
Query: 61 LMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEG 120
L G + + A + +MV L + V L+ R E + F Q+M G
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 121 FNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAV 180
+ D +++ L++ C+ + AL V+ M++ G++P + T+ SL+ G C + + +A
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 181 EILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 240
++ M+ PN + YNTLI LCK ++ A EL + KG+ DV T+N+L+ GL
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 241 CLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNV 300
C + + A + ++M + PD T+ LID +G L+EA +L KEM S N
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281
Query: 301 VTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQ 360
VTYN++I+G C R+ +A++ FD M +G N VTYNTLI G CK R V++ +L +
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341
Query: 361 MIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGR 420
M EG D FTYN+L+ YC+ G ++ A DI M S PDI+T+ L+ GLC G
Sbjct: 342 MSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGE 401
Query: 421 VEVA----SKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDAL 476
+E A + S + GIV AYN +I L + + +A LF + + PDA
Sbjct: 402 IESALVKFDDMRESEKYIGIV----AYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDAR 457
Query: 477 TYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSS 513
TY + GLC GP EA + + M E G + + ++
Sbjct: 458 TYTIMILGLCK-NGPRREADELIRRMKEEGIICQMNA 493
Score = 258 bits (660), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 142/433 (32%), Positives = 230/433 (53%)
Query: 10 DMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEG 69
+MV P + F L+ A + I ++M YG++ D +FT L+
Sbjct: 61 EMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCS 120
Query: 70 NLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYN 129
L AL + +M++ G + VT L+HGFC RI DA S + MV G+ P+ YN
Sbjct: 121 RLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYN 180
Query: 130 TLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILR 189
TL++GLCK G + ALE+++ M ++G DV TYN+L++GLC G +A +L M+ R
Sbjct: 181 TLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKR 240
Query: 190 DCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVA 249
+P+ +T+ LI K+ ++EA EL + + + P+ T+NS+I GLC+ A
Sbjct: 241 SINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDA 300
Query: 250 MELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDG 309
+ F M +KGC P+ TYN LI C M++E +KL + M G ++ TYNTLI G
Sbjct: 301 KKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHG 360
Query: 310 FCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPD 369
+C++ ++ A +IF M + ++ + +T+ L+ GLC + +E A D M
Sbjct: 361 YCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIG 420
Query: 370 KFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLR 429
YN ++ C+A +++A ++ + G +PD TY +I GLCK G A +L+R
Sbjct: 421 IVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIR 480
Query: 430 SIQMKGIVLTPQA 442
++ +GI+ A
Sbjct: 481 RMKEEGIICQMNA 493
Score = 257 bits (656), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 147/439 (33%), Positives = 228/439 (51%), Gaps = 2/439 (0%)
Query: 34 HQIR--PAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGALRIREQMVEHGCLVTNV 91
H IR A + EM P FT L+ + + ++M +G
Sbjct: 48 HSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLY 107
Query: 92 TVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCKVGHVKQALEVMDMM 151
+ +L+H FC+ R+ ALS + +M+ G+ P T+ +L++G C V + A ++ +M
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM 167
Query: 152 LQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQV 211
++ G++P+V YN+LI GLCK GE+ A+E+LN+M + + +TYNTL++ LC +
Sbjct: 168 VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW 227
Query: 212 EEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNML 271
+A + R + + I PDV TF +LI N D A EL++EM P+ TYN +
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287
Query: 272 IDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGI 331
I+ LC G L +A K M S GC NVVTYNTLI GFCK + ++E ++F M +G
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Query: 332 SRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAAD 391
+ + TYNTLI G C+ ++ A + M+ + PD T+ LL C G+I+ A
Sbjct: 348 NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALV 407
Query: 392 IVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALF 451
+M + IV Y +I GLCKA +VE A +L + ++G+ + Y +I L
Sbjct: 408 KFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLC 467
Query: 452 RRKRTTEAMRLFREMMEKA 470
+ EA L R M E+
Sbjct: 468 KNGPRREADELIRRMKEEG 486
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 114/228 (50%), Gaps = 3/228 (1%)
Query: 8 HADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIE 67
+ +M+ + P+ T+N +I LC ++ A + M G P+ T+ TL+ G +
Sbjct: 269 YKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCK 328
Query: 68 EGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFT 127
+D +++ ++M G T N L+HG+C+ G++ AL MVS PD T
Sbjct: 329 FRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIIT 388
Query: 128 YNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMI 187
+ L++GLC G ++ AL D M + + YN +I GLCK +VE+A E+ ++
Sbjct: 389 HCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLP 448
Query: 188 LRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNS 235
+ P+ TY +I LCK EA EL R + +GI +C N+
Sbjct: 449 VEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI---ICQMNA 493
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 75/171 (43%), Gaps = 3/171 (1%)
Query: 403 PDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRL 462
P IV + L+ R E + +++ GI ++ +I R R + A+ +
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 463 FREMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLV 522
+MM+ P +T+ + G C IG+A VI M++ G+ P + L +GL
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVN-RIGDAFSLVILMVKSGYEPNVVVYNTLIDGLC 187
Query: 523 SLGKEETLVELIDMVMDKAKFSDRET--SMVRGFLKIRKFQDALATFGDIL 571
G+ +EL++ + K +D T +++ G ++ DA D++
Sbjct: 188 KNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMM 238
>sp|Q9LMY5|PPR41_ARATH Putative pentatricopeptide repeat-containing protein At1g13630
OS=Arabidopsis thaliana GN=At1g13630 PE=2 SV=3
Length = 826
Score = 259 bits (661), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 167/580 (28%), Positives = 284/580 (48%), Gaps = 35/580 (6%)
Query: 22 TFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGALRIREQM 81
T++ ++ LC+ ++ A+L + + P +F ++M G + G +D A +
Sbjct: 231 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 290
Query: 82 VEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCKVGHV 141
++ G + + + N+L++G C G I +AL +M G PD TYN L G +G +
Sbjct: 291 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 350
Query: 142 KQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTIT-YNT 200
A EV+ ML +G PDV TY L+ G C+LG ++ + +L M+ R N+I +
Sbjct: 351 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 410
Query: 201 LISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKG 260
++S LCK +++EA L + + G+ PD+ ++ +I GLC FD+A+ L+ EM K
Sbjct: 411 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 470
Query: 261 CQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAE 320
P+ T+ L+ LC +GML EA LL + SSG ++V YN +IDG+ K IEEA
Sbjct: 471 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 530
Query: 321 EIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYY 380
E+F + GI+ + T+N+LI G CK++ + +A +++D + + GL P +Y +L+ Y
Sbjct: 531 ELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAY 590
Query: 381 CRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKL------------L 428
G+ K ++ + M + G P VTY + GLC+ + E + + L
Sbjct: 591 ANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGL 650
Query: 429 RSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNG 488
R ++ +GI YN +IQ L R K + A M + + TY + LC
Sbjct: 651 RDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCV- 709
Query: 489 GGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSLGKEETLVELIDMVMDKAKFSDRET 548
G I +A F+ + E+ ++ L + G E V+L ++
Sbjct: 710 YGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLH--------- 760
Query: 549 SMVRGF-LKIRKFQDALATFGDILDSRMPRKTFRSRSKYF 587
RGF + IR + + +R+ R+ + SK+F
Sbjct: 761 ---RGFNVSIRDYSAVI--------NRLCRRHLVNESKFF 789
Score = 249 bits (635), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 152/479 (31%), Positives = 244/479 (50%), Gaps = 13/479 (2%)
Query: 9 ADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEE 68
+DM G++PD T+NIL K I A ++ +M GL+PD T+T L+ G +
Sbjct: 323 SDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQL 382
Query: 69 GNLDGALRIREQMVEHGC-LVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFT 127
GN+D L + + M+ G L + + +V++ G CK GRI++ALS +M ++G +PD
Sbjct: 383 GNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVA 442
Query: 128 YNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMI 187
Y+ +++GLCK+G AL + D M + P+ T+ +L+ GLC+ G + EA +L+ +I
Sbjct: 443 YSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLI 502
Query: 188 LRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFD 247
+ + + YN +I K +EEA EL +V+ GI P V TFNSLI G C T N
Sbjct: 503 SSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIA 562
Query: 248 VAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLI 307
A ++ +K G P +Y L+D+ + G + +L +EM++ G VTY+ +
Sbjct: 563 EARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIF 622
Query: 308 DGFCKLKRIEEA-----EEIFD-------EMEIQGISRNSVTYNTLIDGLCKSRRVEDAA 355
G C+ + E E IF+ +ME +GI + +TYNT+I LC+ + + A
Sbjct: 623 KGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAF 682
Query: 356 QLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGL 415
++ M L TYN L+ C G I++A + ++ Y TLI
Sbjct: 683 VFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAH 742
Query: 416 CKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPD 474
C G E+A KL + +G ++ + Y+ VI L RR E+ F M+ + PD
Sbjct: 743 CVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPD 801
Score = 247 bits (631), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 148/510 (29%), Positives = 255/510 (50%), Gaps = 14/510 (2%)
Query: 15 GIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGA 74
G+ P V + NILI LC I A+ + +M +G+ PD T+ L +G G + GA
Sbjct: 294 GLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGA 353
Query: 75 LRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFT-YNTLVN 133
+ M++ G +T +L+ G C+ G I+ L +++M+S GF + + +++
Sbjct: 354 WEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLS 413
Query: 134 GLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSP 193
GLCK G + +AL + + M +G PD+ Y+ +I GLCKLG+ + A+ + ++M + P
Sbjct: 414 GLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILP 473
Query: 194 NTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDVAMELF 253
N+ T+ L+ LC++ + EA L L S G D+ +N +I G + + A+ELF
Sbjct: 474 NSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF 533
Query: 254 QEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKL 313
+ + G P T+N LI C + EA K+L ++ G A +VV+Y TL+D +
Sbjct: 534 KVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANC 593
Query: 314 KRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME--------- 364
+ +E+ EM+ +GI +VTY+ + GLC+ + E+ ++ + I E
Sbjct: 594 GNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDM 653
Query: 365 ---GLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRV 421
G+ PD+ TYN+++ Y CR + A ++ M S + TY LI LC G +
Sbjct: 654 ESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYI 713
Query: 422 EVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHV 481
A + S+Q + + L+ AY +I+A + A++LF +++ + Y V
Sbjct: 714 RKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAV 773
Query: 482 FRGLCNGGGPIGEAVDFVIEMLERGFLPEF 511
LC + E+ F ML +G P+
Sbjct: 774 INRLCR-RHLVNESKFFFCLMLSQGISPDL 802
Score = 196 bits (498), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 204/409 (49%), Gaps = 13/409 (3%)
Query: 10 DMVSRGIKPD-VSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEE 68
DM+SRG + + + ++++ LCK +I A+ + +M GL+PD ++ ++ GL +
Sbjct: 394 DMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKL 453
Query: 69 GNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTY 128
G D AL + ++M + L + T L+ G C++G + +A S + ++S G D Y
Sbjct: 454 GKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLY 513
Query: 129 NTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMIL 188
N +++G K G +++ALE+ ++++ G P V T+NSLI G CK + EA +IL+ + L
Sbjct: 514 NIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKL 573
Query: 189 RDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSN--- 245
+P+ ++Y TL+ + EL R + ++GI P T++ + +GLC
Sbjct: 574 YGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHEN 633
Query: 246 ---------FDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGC 296
F+ + ++M+++G PD+ TYN +I LC L A L+ M+S
Sbjct: 634 CNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNL 693
Query: 297 ARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQ 356
+ TYN LID C I +A+ ++ Q +S + Y TLI C E A +
Sbjct: 694 DASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVK 753
Query: 357 LMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDI 405
L Q++ G Y++++ CR + + M S G PD+
Sbjct: 754 LFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPDL 802
Score = 192 bits (487), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 215/429 (50%), Gaps = 9/429 (2%)
Query: 106 IEDALSFIQEMVSEGFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNS 165
++D+L +++M + N +YN+++ H ++ ++ D+ +E D + TY++
Sbjct: 182 VDDSLYILKKMKDQNLNVSTQSYNSVLY------HFRETDKMWDVY-KEIKDKNEHTYST 234
Query: 166 LISGLCKLGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKG 225
++ GLC+ ++E+AV L +D P+ +++N+++S CK V+ A + G
Sbjct: 235 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCG 294
Query: 226 ILPDVCTFNSLIQGLCLTSNFDVAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEAL 285
++P V + N LI GLCL + A+EL +M G +PD TYN+L GM+ A
Sbjct: 295 LVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAW 354
Query: 286 KLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVT-YNTLIDG 344
+++++M G + +V+TY L+ G C+L I+ + +M +G NS+ + ++ G
Sbjct: 355 EVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSG 414
Query: 345 LCKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPD 404
LCK+ R+++A L +QM +GL PD Y+ ++ C+ G A + M P+
Sbjct: 415 LCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPN 474
Query: 405 IVTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFR 464
T+G L+ GLC+ G + A LL S+ G L YN VI + EA+ LF+
Sbjct: 475 SRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFK 534
Query: 465 EMMEKADPPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLERGFLPEFSSFYMLAEGLVSL 524
++E P T+ + G C I EA + + G P S+ L + +
Sbjct: 535 VVIETGITPSVATFNSLIYGYCKTQN-IAEARKILDVIKLYGLAPSVVSYTTLMDAYANC 593
Query: 525 GKEETLVEL 533
G +++ EL
Sbjct: 594 GNTKSIDEL 602
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 155/326 (47%), Gaps = 16/326 (4%)
Query: 253 FQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCK 312
F++ ++ G ++ML+ M++++L +LK+M+ + +YN+++ F
Sbjct: 159 FRKWESTG-----LVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF-- 211
Query: 313 LKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGLKPDKFT 372
+ ++ +++ E++ +N TY+T++DGLC+ +++EDA + + + P +
Sbjct: 212 -RETDKMWDVYKEIK----DKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVS 266
Query: 373 YNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQ 432
+NS+++ YC+ G + A + G P + ++ LI GLC G + A +L +
Sbjct: 267 FNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMN 326
Query: 433 MKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPI 492
G+ YN + + + A + R+M++K PD +TY + G C G I
Sbjct: 327 KHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGN-I 385
Query: 493 GEAVDFVIEMLERGF-LPEFSSFYMLAEGLVSLGKEETLVELIDMVMDKAKFSD--RETS 549
+ + +ML RGF L ++ GL G+ + + L + + D +
Sbjct: 386 DMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSI 445
Query: 550 MVRGFLKIRKFQDALATFGDILDSRM 575
++ G K+ KF AL + ++ D R+
Sbjct: 446 VIHGLCKLGKFDMALWLYDEMCDKRI 471
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 203,489,224
Number of Sequences: 539616
Number of extensions: 8163439
Number of successful extensions: 40017
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 466
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 24726
Number of HSP's gapped (non-prelim): 3583
length of query: 587
length of database: 191,569,459
effective HSP length: 123
effective length of query: 464
effective length of database: 125,196,691
effective search space: 58091264624
effective search space used: 58091264624
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)