BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038626
(197 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4E9I|A Chain A, Glucose-6-P Dehydrogenase (Apo Form) From Trypanosoma
Cruzi
pdb|4E9I|B Chain B, Glucose-6-P Dehydrogenase (Apo Form) From Trypanosoma
Cruzi
pdb|4E9I|C Chain C, Glucose-6-P Dehydrogenase (Apo Form) From Trypanosoma
Cruzi
pdb|4E9I|D Chain D, Glucose-6-P Dehydrogenase (Apo Form) From Trypanosoma
Cruzi
pdb|4EM5|A Chain A, Trypanosoma Cruzi Glucose-6-P Dehydrogenase In Complex
With G6p
pdb|4EM5|B Chain B, Trypanosoma Cruzi Glucose-6-P Dehydrogenase In Complex
With G6p
pdb|4EM5|C Chain C, Trypanosoma Cruzi Glucose-6-P Dehydrogenase In Complex
With G6p
pdb|4EM5|D Chain D, Trypanosoma Cruzi Glucose-6-P Dehydrogenase In Complex
With G6p
Length = 541
Score = 133 bits (335), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 104/184 (56%), Gaps = 8/184 (4%)
Query: 22 ASSEKAGSTLSITFVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTD-EELR 80
S E L+I +GASGDLAKKK FPALF LY LP D + GYAR+ + D E+ +
Sbjct: 46 VSPELRSRALTIVVLGASGDLAKKKTFPALFQLYCNGMLPRDVNILGYARSTMEDVEKWK 105
Query: 81 NVIRKTLTCGIDKKYTKLDQFLKRCFYHSGLYNSEEHFAELDSKLKEKEVG-----KLSN 135
+D++ + FL+R Y +G Y+ +E FA L+ ++ E K N
Sbjct: 106 KDTLAGFFTRLDERGCHVGNFLRRISYMTGSYDRDEDFARLNERILRMEEAFQGPEKGGN 165
Query: 136 RLFYLSIPPNIFVEVAKCASLRASSAT--GWTRVIVEKPIGRDSKSSGELTRSLKQYLRE 193
RLFYL++PP++FV V + S A GW R+IVEKP GRD+++S +L+ LK E
Sbjct: 166 RLFYLALPPSVFVGVCRGLSKGAMQKPELGWVRLIVEKPFGRDTETSEQLSNQLKPLFNE 225
Query: 194 DQIF 197
Q+F
Sbjct: 226 RQVF 229
>pdb|2BH9|A Chain A, X-Ray Structure Of A Deletion Variant Of Human Glucose 6-
Phosphate Dehydrogenase Complexed With Structural And
Coenzyme Nadp
pdb|2BHL|A Chain A, X-Ray Structure Of Human Glucose-6-Phosphate Dehydrogenase
(Deletion Variant) Complexed With Glucose-6-Phosphate
pdb|2BHL|B Chain B, X-Ray Structure Of Human Glucose-6-Phosphate Dehydrogenase
(Deletion Variant) Complexed With Glucose-6-Phosphate
Length = 489
Score = 127 bits (319), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 95/162 (58%), Gaps = 1/162 (0%)
Query: 36 VGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVIRKTLTCGIDKKY 95
+GASGDLAKKKI+P ++ L+ + LPE+ + GYAR++LT ++R ++K
Sbjct: 11 MGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEK- 69
Query: 96 TKLDQFLKRCFYHSGLYNSEEHFAELDSKLKEKEVGKLSNRLFYLSIPPNIFVEVAKCAS 155
KL+ F R Y +G Y+ + L+S + +G +NRLFYL++PP ++ V K
Sbjct: 70 LKLEDFFARNSYVAGQYDDAASYQRLNSHMNALHLGSQANRLFYLALPPTVYEAVTKNIH 129
Query: 156 LRASSATGWTRVIVEKPIGRDSKSSGELTRSLKQYLREDQIF 197
S GW R+IVEKP GRD +SS L+ + REDQI+
Sbjct: 130 ESCMSQIGWNRIIVEKPFGRDLQSSDRLSNHISSLFREDQIY 171
>pdb|1QKI|A Chain A, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|B Chain B, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|C Chain C, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|D Chain D, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|E Chain E, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|F Chain F, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|G Chain G, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|H Chain H, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
Length = 514
Score = 127 bits (318), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 95/162 (58%), Gaps = 1/162 (0%)
Query: 36 VGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVIRKTLTCGIDKKY 95
+GASGDLAKKKI+P ++ L+ + LPE+ + GYAR++LT ++R ++K
Sbjct: 36 MGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEK- 94
Query: 96 TKLDQFLKRCFYHSGLYNSEEHFAELDSKLKEKEVGKLSNRLFYLSIPPNIFVEVAKCAS 155
KL+ F R Y +G Y+ + L+S + +G +NRLFYL++PP ++ V K
Sbjct: 95 LKLEDFFARNSYVAGQYDDAASYQRLNSHMNALHLGSQANRLFYLALPPTVYEAVTKNIH 154
Query: 156 LRASSATGWTRVIVEKPIGRDSKSSGELTRSLKQYLREDQIF 197
S GW R+IVEKP GRD +SS L+ + REDQI+
Sbjct: 155 ESCMSQIGWNRIIVEKPFGRDLQSSDRLSNHISSLFREDQIY 196
>pdb|1E7M|A Chain A, Active Site Mutant (D177->n) Of Glucose 6-Phosphate
Dehydrogenase From Leuconostoc Mesenteroides
pdb|1E7Y|A Chain A, Active Site Mutant (D177->n) Of Glucose 6-Phosphate
Dehydrogenase From Leuconostoc Mesenteroides Complexed
With Substrate And Nadph
Length = 485
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 90/168 (53%), Gaps = 4/168 (2%)
Query: 33 ITFVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVIRKTLTCGID 92
+TF G +GDLAK+K++P++F LY + L + F + G AR L D+E + ++R ++ D
Sbjct: 8 VTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDEFKQLVRDSIKDFTD 67
Query: 93 KKYTKLDQFLKRCFYHSGLYNSEEHFAELDSKLKE--KEVGKLSNRLFYLSIPPNIFVEV 150
+ + + F++ Y + +A L ++E + NR+FY+S+ P F +
Sbjct: 68 DQ-AQAEAFIEHFSYRAHDVTDAASYAVLKEAIEEAADKFDIDGNRIFYMSVAPRFFGTI 126
Query: 151 AKCASLRASSA-TGWTRVIVEKPIGRDSKSSGELTRSLKQYLREDQIF 197
AK A TG+ R+++EKP G ++ EL L+ ++Q+F
Sbjct: 127 AKYLKSEGLLADTGYNRLMIEKPFGTSYDTAAELQNDLENAFDDNQLF 174
>pdb|2DPG|A Chain A, Complex Of Inactive Mutant (H240->n) Of Glucose
6-Phosphate Dehydrogenase From Leuconostoc Mesenteroides
With Nadp+
Length = 485
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 90/168 (53%), Gaps = 4/168 (2%)
Query: 33 ITFVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVIRKTLTCGID 92
+TF G +GDLAK+K++P++F LY + L + F + G AR L D+E + ++R ++ D
Sbjct: 8 VTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDEFKQLVRDSIKDFTD 67
Query: 93 KKYTKLDQFLKRCFYHSGLYNSEEHFAELDSKLKE--KEVGKLSNRLFYLSIPPNIFVEV 150
+ + + F++ Y + +A L ++E + NR+FY+S+ P F +
Sbjct: 68 DQ-AQAEAFIEHFSYRAHDVTDAASYAVLKEAIEEAADKFDIDGNRIFYMSVAPRFFGTI 126
Query: 151 AKCASLRASSA-TGWTRVIVEKPIGRDSKSSGELTRSLKQYLREDQIF 197
AK A TG+ R+++EKP G ++ EL L+ ++Q+F
Sbjct: 127 AKYLKSEGLLADTGYNRLMIEKPFGTSYDTAAELQNDLENAFDDNQLF 174
>pdb|1H93|A Chain A, Active Mutant (S215->c) Of Glucose 6-Phosphate
Dehydrogenase From Leuconostoc Mesenteroides
pdb|1H94|A Chain A, Complex Of Active Mutant (S215->c) Of Glucose 6-Phosphate
Dehydrogenase From L.Mesenteroides With Coenzyme Nad
Length = 485
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 90/168 (53%), Gaps = 4/168 (2%)
Query: 33 ITFVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVIRKTLTCGID 92
+TF G +GDLAK+K++P++F LY + L + F + G AR L D+E + ++R ++ D
Sbjct: 8 VTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDEFKQLVRDSIKDFTD 67
Query: 93 KKYTKLDQFLKRCFYHSGLYNSEEHFAELDSKLKE--KEVGKLSNRLFYLSIPPNIFVEV 150
+ + + F++ Y + +A L ++E + NR+FY+S+ P F +
Sbjct: 68 DQ-AQAEAFIEHFSYRAHDVTDAASYAVLKEAIEEAADKFDIDGNRIFYMSVAPRFFGTI 126
Query: 151 AKCASLRASSA-TGWTRVIVEKPIGRDSKSSGELTRSLKQYLREDQIF 197
AK A TG+ R+++EKP G ++ EL L+ ++Q+F
Sbjct: 127 AKYLKSEGLLADTGYNRLMIEKPFGTSYDTAAELQNDLENAFDDNQLF 174
>pdb|1E77|A Chain A, Complex Of Active Mutant (Q365->c) Of Glucose 6-Phosphate
Dehydrogenase From Leuconostoc Mesenteroides With
Substrate
pdb|1H9A|A Chain A, Complex Of Active Mutant (Q365->c) Of Glucose 6-Phosphate
Dehydrogenase From L. Mesenteroides With Coenzyme Nadp
pdb|1H9B|A Chain A, Active Mutant (Q365->c) Of Glucose 6-Phosphate
Dehydrogenase From Leuconostoc Mesenteroides
Length = 485
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 90/168 (53%), Gaps = 4/168 (2%)
Query: 33 ITFVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVIRKTLTCGID 92
+TF G +GDLAK+K++P++F LY + L + F + G AR L D+E + ++R ++ D
Sbjct: 8 VTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDEFKQLVRDSIKDFTD 67
Query: 93 KKYTKLDQFLKRCFYHSGLYNSEEHFAELDSKLKE--KEVGKLSNRLFYLSIPPNIFVEV 150
+ + + F++ Y + +A L ++E + NR+FY+S+ P F +
Sbjct: 68 DQ-AQAEAFIEHFSYRAHDVTDAASYAVLKEAIEEAADKFDIDGNRIFYMSVAPRFFGTI 126
Query: 151 AKCASLRASSA-TGWTRVIVEKPIGRDSKSSGELTRSLKQYLREDQIF 197
AK A TG+ R+++EKP G ++ EL L+ ++Q+F
Sbjct: 127 AKYLKSEGLLADTGYNRLMIEKPFGTSYDTAAELQNDLENAFDDNQLF 174
>pdb|1DPG|A Chain A, Glucose 6-Phosphate Dehydrogenase From Leuconostoc
Mesenteroides
pdb|1DPG|B Chain B, Glucose 6-Phosphate Dehydrogenase From Leuconostoc
Mesenteroides
Length = 485
Score = 90.5 bits (223), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 89/168 (52%), Gaps = 4/168 (2%)
Query: 33 ITFVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNVIRKTLTCGID 92
+TF G +GDLAK+K++P++F LY + L + F + G AR L D+E + ++R + D
Sbjct: 8 VTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDEFKQLVRDCIKDFTD 67
Query: 93 KKYTKLDQFLKRCFYHSGLYNSEEHFAELDSKLKE--KEVGKLSNRLFYLSIPPNIFVEV 150
+ + + F++ Y + +A L ++E + NR+FY+S+ P F +
Sbjct: 68 DQ-AQAEAFIEHFSYRAHDVTDAASYAVLKEAIEEAADKFDIDGNRIFYMSVAPRFFGTI 126
Query: 151 AKCASLRASSA-TGWTRVIVEKPIGRDSKSSGELTRSLKQYLREDQIF 197
AK A TG+ R+++EKP G ++ EL L+ ++Q+F
Sbjct: 127 AKYLKSEGLLADTGYNRLMIEKPFGTSYDTAAELQNDLENAFDDNQLF 174
>pdb|1EZL|A Chain A, Crystal Structure Of The Disulphide Bond-Deficient Azurin
Mutant C3aC26A: HOW IMPORTANT IS THE S-S Bond For
Folding And Stability?
pdb|1EZL|B Chain B, Crystal Structure Of The Disulphide Bond-Deficient Azurin
Mutant C3aC26A: HOW IMPORTANT IS THE S-S Bond For
Folding And Stability?
pdb|1EZL|C Chain C, Crystal Structure Of The Disulphide Bond-Deficient Azurin
Mutant C3aC26A: HOW IMPORTANT IS THE S-S Bond For
Folding And Stability?
pdb|1EZL|D Chain D, Crystal Structure Of The Disulphide Bond-Deficient Azurin
Mutant C3aC26A: HOW IMPORTANT IS THE S-S Bond For
Folding And Stability?
Length = 128
Score = 30.8 bits (68), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 11/92 (11%)
Query: 54 LYYEDCLPEDFTVFGYARTKLTDEELRNVIRKTLTCGIDKKYTKLDQFLKRCFYHSGLYN 113
L + LP++ V G+ T +++ V+ + G+DK Y K D R H+ L
Sbjct: 33 LSHPGNLPKN--VMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDD--SRVIAHTKLIG 88
Query: 114 S-EEHFAELD-SKLKEKEVGKLSNRLFYLSIP 143
S E+ D SKLKE E +F+ + P
Sbjct: 89 SGEKDSVTFDVSKLKEGE-----QYMFFCTFP 115
>pdb|3IN2|A Chain A, Crystal Structure Of The N47sM121L VARIANT OF PSEUDOMONAS
Aeruginosa Azurin In The Cu(Ii) State
pdb|3JT2|A Chain A, Cu(Ii) N47sM121L VARIANT OF PSEUDOMONAS AERUGINOSA AZURIN
pdb|3JT2|B Chain B, Cu(Ii) N47sM121L VARIANT OF PSEUDOMONAS AERUGINOSA AZURIN
Length = 128
Score = 30.8 bits (68), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 11/86 (12%)
Query: 60 LPEDFTVFGYARTKLTDEELRNVIRKTLTCGIDKKYTKLDQFLKRCFYHSGLYNS-EEHF 118
LP++ V G++ T +++ V+ + G+DK Y K D R H+ L S E+
Sbjct: 39 LPKN--VMGHSWVLSTAADMQGVVTDGMASGLDKDYLKPDD--SRVIAHTKLIGSGEKDS 94
Query: 119 AELD-SKLKEKEVGKLSNRLFYLSIP 143
D SKLKE E +F+ + P
Sbjct: 95 VTFDVSKLKEGE-----QYMFFCTFP 115
>pdb|1ZOS|A Chain A, Structure Of 5'-MethylthionadenosineS-Adenosylhomocysteine
Nucleosidase From S. Pneumoniae With A Transition-State
Inhibitor Mt-Imma
pdb|1ZOS|B Chain B, Structure Of 5'-MethylthionadenosineS-Adenosylhomocysteine
Nucleosidase From S. Pneumoniae With A Transition-State
Inhibitor Mt-Imma
pdb|1ZOS|C Chain C, Structure Of 5'-MethylthionadenosineS-Adenosylhomocysteine
Nucleosidase From S. Pneumoniae With A Transition-State
Inhibitor Mt-Imma
pdb|1ZOS|D Chain D, Structure Of 5'-MethylthionadenosineS-Adenosylhomocysteine
Nucleosidase From S. Pneumoniae With A Transition-State
Inhibitor Mt-Imma
pdb|1ZOS|E Chain E, Structure Of 5'-MethylthionadenosineS-Adenosylhomocysteine
Nucleosidase From S. Pneumoniae With A Transition-State
Inhibitor Mt-Imma
pdb|1ZOS|F Chain F, Structure Of 5'-MethylthionadenosineS-Adenosylhomocysteine
Nucleosidase From S. Pneumoniae With A Transition-State
Inhibitor Mt-Imma
Length = 230
Score = 30.4 bits (67), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 8/73 (10%)
Query: 54 LYYEDCLPEDFTVFGYARTKLTDEELRNVIRKTLTCGIDKKYTKLDQFLKRCFYHSGLYN 113
L Y D D T FGYA ++ + L KT I + ++LDQ +H GL
Sbjct: 95 LAYHDV---DVTAFGYAYGQMAQQPLYFESDKTFVAQIQESLSQLDQ-----NWHLGLIA 146
Query: 114 SEEHFAELDSKLK 126
+ + F + K++
Sbjct: 147 TGDSFVAGNDKIE 159
>pdb|3MMS|A Chain A, Crystal Structure Of Streptococcus Pneumoniae MtaSAH
NUCLEO Complex With 8-Aminoadenine
Length = 230
Score = 30.4 bits (67), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 8/73 (10%)
Query: 54 LYYEDCLPEDFTVFGYARTKLTDEELRNVIRKTLTCGIDKKYTKLDQFLKRCFYHSGLYN 113
L Y D D T FGYA ++ + L KT I + ++LDQ +H GL
Sbjct: 95 LAYHDV---DVTAFGYAYGQMAQQPLYFESDKTFVAQIQESLSQLDQ-----NWHLGLIA 146
Query: 114 SEEHFAELDSKLK 126
+ + F + K++
Sbjct: 147 TGDSFVAGNDKIE 159
>pdb|2IWE|A Chain A, Structure Of A Cavity Mutant (H117g) Of Pseudomonas
Aeruginosa Azurin
pdb|2IWE|D Chain D, Structure Of A Cavity Mutant (H117g) Of Pseudomonas
Aeruginosa Azurin
pdb|2IWE|G Chain G, Structure Of A Cavity Mutant (H117g) Of Pseudomonas
Aeruginosa Azurin
pdb|2IWE|J Chain J, Structure Of A Cavity Mutant (H117g) Of Pseudomonas
Aeruginosa Azurin
pdb|3N2J|A Chain A, Azurin H117g, Oxidized Form
pdb|3N2J|B Chain B, Azurin H117g, Oxidized Form
pdb|3N2J|C Chain C, Azurin H117g, Oxidized Form
pdb|3N2J|D Chain D, Azurin H117g, Oxidized Form
pdb|3N2J|E Chain E, Azurin H117g, Oxidized Form
pdb|3N2J|F Chain F, Azurin H117g, Oxidized Form
pdb|3N2J|G Chain G, Azurin H117g, Oxidized Form
pdb|3N2J|H Chain H, Azurin H117g, Oxidized Form
pdb|3N2J|I Chain I, Azurin H117g, Oxidized Form
pdb|3N2J|J Chain J, Azurin H117g, Oxidized Form
pdb|3N2J|K Chain K, Azurin H117g, Oxidized Form
pdb|3N2J|L Chain L, Azurin H117g, Oxidized Form
Length = 128
Score = 30.4 bits (67), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 60 LPEDFTVFGYARTKLTDEELRNVIRKTLTCGIDKKYTKLDQFLKRCFYHSGLYNS-EEHF 118
LP++ V G+ T +++ V+ + G+DK Y K D R H+ L S E+
Sbjct: 39 LPKN--VMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDD--SRVIAHTKLIGSGEKDS 94
Query: 119 AELD-SKLKEKEVGKLSNRLFYLSIP 143
D SKLKE E +F+ + P
Sbjct: 95 VTFDVSKLKEGE-----QYMFFCTFP 115
>pdb|1NZR|A Chain A, Crystal Structure Of The Azurin Mutant Nickel-Trp48met
From Pseudomonas Aeruginosa At 2.2 Angstroms Resolution
pdb|1NZR|B Chain B, Crystal Structure Of The Azurin Mutant Nickel-Trp48met
From Pseudomonas Aeruginosa At 2.2 Angstroms Resolution
pdb|1NZR|C Chain C, Crystal Structure Of The Azurin Mutant Nickel-Trp48met
From Pseudomonas Aeruginosa At 2.2 Angstroms Resolution
pdb|1NZR|D Chain D, Crystal Structure Of The Azurin Mutant Nickel-Trp48met
From Pseudomonas Aeruginosa At 2.2 Angstroms Resolution
Length = 128
Score = 30.4 bits (67), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 60 LPEDFTVFGYARTKLTDEELRNVIRKTLTCGIDKKYTKLDQFLKRCFYHSGLYNS-EEHF 118
LP++ V G+ T +++ V+ + G+DK Y K D R H+ L S E+
Sbjct: 39 LPKN--VMGHNMVLSTAADMQGVVTDGMASGLDKDYLKPDD--SRVIAHTKLIGSGEKDS 94
Query: 119 AELD-SKLKEKEVGKLSNRLFYLSIP 143
D SKLKE E +F+ + P
Sbjct: 95 VTFDVSKLKEGE-----QYMFFCTFP 115
>pdb|3AZU|A Chain A, X-Ray Crystal Structure Of The Two Site-Specific Mutants
His35gln And His35leu Of Azurin From Pseudomonas
Aeruginosa
pdb|3AZU|B Chain B, X-Ray Crystal Structure Of The Two Site-Specific Mutants
His35gln And His35leu Of Azurin From Pseudomonas
Aeruginosa
pdb|3AZU|C Chain C, X-Ray Crystal Structure Of The Two Site-Specific Mutants
His35gln And His35leu Of Azurin From Pseudomonas
Aeruginosa
pdb|3AZU|D Chain D, X-Ray Crystal Structure Of The Two Site-Specific Mutants
His35gln And His35leu Of Azurin From Pseudomonas
Aeruginosa
Length = 128
Score = 30.0 bits (66), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 60 LPEDFTVFGYARTKLTDEELRNVIRKTLTCGIDKKYTKLDQFLKRCFYHSGLYNS-EEHF 118
LP++ V G+ T +++ V+ + G+DK Y K D R H+ L S E+
Sbjct: 39 LPKN--VMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDD--SRVIAHTKLIGSGEKDS 94
Query: 119 AELD-SKLKEKEVGKLSNRLFYLSIP 143
D SKLKE E +F+ + P
Sbjct: 95 VTFDVSKLKEGE-----QYMFFCTFP 115
>pdb|2AZU|A Chain A, X-Ray Crystal Structure Of The Two Site-Specific Mutants
His35Gln And His35Leu Of Azurin From Pseudomonas
Aeruginosa
pdb|2AZU|B Chain B, X-Ray Crystal Structure Of The Two Site-Specific Mutants
His35Gln And His35Leu Of Azurin From Pseudomonas
Aeruginosa
pdb|2AZU|C Chain C, X-Ray Crystal Structure Of The Two Site-Specific Mutants
His35Gln And His35Leu Of Azurin From Pseudomonas
Aeruginosa
pdb|2AZU|D Chain D, X-Ray Crystal Structure Of The Two Site-Specific Mutants
His35Gln And His35Leu Of Azurin From Pseudomonas
Aeruginosa
Length = 128
Score = 30.0 bits (66), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 60 LPEDFTVFGYARTKLTDEELRNVIRKTLTCGIDKKYTKLDQFLKRCFYHSGLYNS-EEHF 118
LP++ V G+ T +++ V+ + G+DK Y K D R H+ L S E+
Sbjct: 39 LPKN--VMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDD--SRVIAHTKLIGSGEKDS 94
Query: 119 AELD-SKLKEKEVGKLSNRLFYLSIP 143
D SKLKE E +F+ + P
Sbjct: 95 VTFDVSKLKEGE-----QYMFFCTFP 115
>pdb|2GHZ|A Chain A, Crystal Structure Of Azurin Phe114pro Mutant
pdb|2GHZ|B Chain B, Crystal Structure Of Azurin Phe114pro Mutant
pdb|2GI0|A Chain A, Crystal Structure Of Cu(I) Phe114pro Azurin Mutant
pdb|2GI0|B Chain B, Crystal Structure Of Cu(I) Phe114pro Azurin Mutant
Length = 128
Score = 30.0 bits (66), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 12/93 (12%)
Query: 54 LYYEDCLPEDFTVFGYARTKLTDEELRNVIRKTLTCGIDKKYTKLDQFLKRCFYHSGLYN 113
L + LP++ V G+ T +++ V+ + G+DK Y K D R H+ L
Sbjct: 33 LSHPGNLPKN--VMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDD--SRVIAHTKLIG 88
Query: 114 S-EEHFAELD-SKLKEKEVGKLSNRLFYLSIPP 144
S E+ D SKLKE E + + PP
Sbjct: 89 SGEKDSVTFDVSKLKEGE------QYMFFCTPP 115
>pdb|2TSA|A Chain A, Azurin Mutant M121a
pdb|2TSA|B Chain B, Azurin Mutant M121a
pdb|2TSA|C Chain C, Azurin Mutant M121a
pdb|2TSA|D Chain D, Azurin Mutant M121a
pdb|2TSB|A Chain A, Azurin Mutant M121a-Azide
pdb|2TSB|B Chain B, Azurin Mutant M121a-Azide
pdb|2TSB|C Chain C, Azurin Mutant M121a-Azide
pdb|2TSB|D Chain D, Azurin Mutant M121a-Azide
Length = 128
Score = 30.0 bits (66), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 60 LPEDFTVFGYARTKLTDEELRNVIRKTLTCGIDKKYTKLDQFLKRCFYHSGLYNS-EEHF 118
LP++ V G+ T +++ V+ + G+DK Y K D R H+ L S E+
Sbjct: 39 LPKN--VMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDD--SRVIAHTKLIGSGEKDS 94
Query: 119 AELD-SKLKEKEVGKLSNRLFYLSIP 143
D SKLKE E +F+ + P
Sbjct: 95 VTFDVSKLKEGE-----QYMFFCTFP 115
>pdb|1VLX|A Chain A, Structure Of Electron Transfer (cobalt-protein)
pdb|1VLX|B Chain B, Structure Of Electron Transfer (cobalt-protein)
pdb|1VLX|C Chain C, Structure Of Electron Transfer (cobalt-protein)
pdb|1VLX|D Chain D, Structure Of Electron Transfer (cobalt-protein)
pdb|1BEX|A Chain A, Structure Of Ruthenium-modified Pseudomonas Aeruginosa
Azurin
pdb|1BEX|B Chain B, Structure Of Ruthenium-modified Pseudomonas Aeruginosa
Azurin
pdb|1E5Y|A Chain A, Azurin From Pseudomonas Aeruginosa, Reduced Form, Ph 5.5
pdb|1E5Y|B Chain B, Azurin From Pseudomonas Aeruginosa, Reduced Form, Ph 5.5
pdb|1E5Y|C Chain C, Azurin From Pseudomonas Aeruginosa, Reduced Form, Ph 5.5
pdb|1E5Y|D Chain D, Azurin From Pseudomonas Aeruginosa, Reduced Form, Ph 5.5
pdb|1E5Z|A Chain A, Azurin From Pseudomonas Aeruginosa, Reduced Form, Ph 9.0
pdb|1E5Z|B Chain B, Azurin From Pseudomonas Aeruginosa, Reduced Form, Ph 9.0
pdb|1E5Z|C Chain C, Azurin From Pseudomonas Aeruginosa, Reduced Form, Ph 9.0
pdb|1E5Z|D Chain D, Azurin From Pseudomonas Aeruginosa, Reduced Form, Ph 9.0
pdb|1E65|A Chain A, Azurin From Pseudomonas Aeruginosa, Apo Form
pdb|1E65|B Chain B, Azurin From Pseudomonas Aeruginosa, Apo Form
pdb|1E65|C Chain C, Azurin From Pseudomonas Aeruginosa, Apo Form
pdb|1E65|D Chain D, Azurin From Pseudomonas Aeruginosa, Apo Form
pdb|1E67|A Chain A, Zn-Azurin From Pseudomonas Aeruginosa
pdb|1E67|B Chain B, Zn-Azurin From Pseudomonas Aeruginosa
pdb|1E67|C Chain C, Zn-Azurin From Pseudomonas Aeruginosa
pdb|1E67|D Chain D, Zn-Azurin From Pseudomonas Aeruginosa
pdb|1JZJ|A Chain A, Pseudomonas Aeruginosa Azurin Os(Bpy)2(Im)(His83)
pdb|1JZJ|B Chain B, Pseudomonas Aeruginosa Azurin Os(Bpy)2(Im)(His83)
pdb|1JZE|A Chain A, Pseudomonas Aeruginosa Azurin Ru(Bpy)2(Im)(His83)
pdb|1JZF|A Chain A, Pseudomonas Aeruginosa Oxidized Azurin(Cu2+) Ru(Tpy)(Phen)
(His83)
pdb|1JZG|A Chain A, Pseudomonas Aeruginosa Reduced Azurin (Cu1+) Ru(Tpy)(Phen)
(His83)
pdb|1JZH|A Chain A, Pseudomonas Aeruginosa Azurin Ru(tpy)(bpy)(his83)
pdb|1JZI|A Chain A, Pseudomonas Aeruginosa Azurin Re(Phen)(Co)3(His83)
pdb|1JZI|B Chain B, Pseudomonas Aeruginosa Azurin Re(Phen)(Co)3(His83)
pdb|1AZU|A Chain A, Structural Features Of Azurin At 2.7 Angstroms Resolution
pdb|4AZU|A Chain A, Crystal Structure Analysis Of Oxidized Pseudomonas
Aeruginosa Azurin At Ph 5.5 And Ph 9.0. A Ph-Induced
Conformational Transition Involves A Peptide Bond Flip
pdb|4AZU|B Chain B, Crystal Structure Analysis Of Oxidized Pseudomonas
Aeruginosa Azurin At Ph 5.5 And Ph 9.0. A Ph-Induced
Conformational Transition Involves A Peptide Bond Flip
pdb|4AZU|C Chain C, Crystal Structure Analysis Of Oxidized Pseudomonas
Aeruginosa Azurin At Ph 5.5 And Ph 9.0. A Ph-Induced
Conformational Transition Involves A Peptide Bond Flip
pdb|4AZU|D Chain D, Crystal Structure Analysis Of Oxidized Pseudomonas
Aeruginosa Azurin At Ph 5.5 And Ph 9.0. A Ph-Induced
Conformational Transition Involves A Peptide Bond Flip
pdb|5AZU|A Chain A, Crystal Structure Analysis Of Oxidized Pseudomonas
Aeruginosa Azurin At Ph 5.5 And Ph 9.0. A Ph-Induced
Conformational Transition Involves A Peptide Bond Flip
pdb|5AZU|B Chain B, Crystal Structure Analysis Of Oxidized Pseudomonas
Aeruginosa Azurin At Ph 5.5 And Ph 9.0. A Ph-Induced
Conformational Transition Involves A Peptide Bond Flip
pdb|5AZU|C Chain C, Crystal Structure Analysis Of Oxidized Pseudomonas
Aeruginosa Azurin At Ph 5.5 And Ph 9.0. A Ph-Induced
Conformational Transition Involves A Peptide Bond Flip
pdb|5AZU|D Chain D, Crystal Structure Analysis Of Oxidized Pseudomonas
Aeruginosa Azurin At Ph 5.5 And Ph 9.0. A Ph-Induced
Conformational Transition Involves A Peptide Bond Flip
pdb|3UGE|A Chain A, Silver Metallated Pseudomonas Aeruginosa Azurin At 1.70 A
pdb|3UGE|B Chain B, Silver Metallated Pseudomonas Aeruginosa Azurin At 1.70 A
pdb|3UGE|C Chain C, Silver Metallated Pseudomonas Aeruginosa Azurin At 1.70 A
pdb|3UGE|D Chain D, Silver Metallated Pseudomonas Aeruginosa Azurin At 1.70 A
pdb|4HZ1|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Azurin With
Iron(Ii) At The Copper-Binding Site.
pdb|4HZ1|B Chain B, Crystal Structure Of Pseudomonas Aeruginosa Azurin With
Iron(Ii) At The Copper-Binding Site.
pdb|4HZ1|C Chain C, Crystal Structure Of Pseudomonas Aeruginosa Azurin With
Iron(Ii) At The Copper-Binding Site.
pdb|4HZ1|D Chain D, Crystal Structure Of Pseudomonas Aeruginosa Azurin With
Iron(Ii) At The Copper-Binding Site
Length = 128
Score = 30.0 bits (66), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 60 LPEDFTVFGYARTKLTDEELRNVIRKTLTCGIDKKYTKLDQFLKRCFYHSGLYNS-EEHF 118
LP++ V G+ T +++ V+ + G+DK Y K D R H+ L S E+
Sbjct: 39 LPKN--VMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDD--SRVIAHTKLIGSGEKDS 94
Query: 119 AELD-SKLKEKEVGKLSNRLFYLSIP 143
D SKLKE E +F+ + P
Sbjct: 95 VTFDVSKLKEGE-----QYMFFCTFP 115
>pdb|1ILS|A Chain A, X-Ray Crystal Structure The Two Site-Specific Mutants
Ile7ser And Phe110ser Of Azurin From Pseudomonas
Aeruginosa
pdb|1ILS|B Chain B, X-Ray Crystal Structure The Two Site-Specific Mutants
Ile7ser And Phe110ser Of Azurin From Pseudomonas
Aeruginosa
pdb|1ILS|C Chain C, X-Ray Crystal Structure The Two Site-Specific Mutants
Ile7ser And Phe110ser Of Azurin From Pseudomonas
Aeruginosa
pdb|1ILS|D Chain D, X-Ray Crystal Structure The Two Site-Specific Mutants
Ile7ser And Phe110ser Of Azurin From Pseudomonas
Aeruginosa
Length = 128
Score = 30.0 bits (66), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 60 LPEDFTVFGYARTKLTDEELRNVIRKTLTCGIDKKYTKLDQFLKRCFYHSGLYNS-EEHF 118
LP++ V G+ T +++ V+ + G+DK Y K D R H+ L S E+
Sbjct: 39 LPKN--VMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDD--SRVIAHTKLIGSGEKDS 94
Query: 119 AELD-SKLKEKEVGKLSNRLFYLSIP 143
D SKLKE E +F+ + P
Sbjct: 95 VTFDVSKLKEGE-----QYMFFCTFP 115
>pdb|3IN0|A Chain A, Crystal Structure Of The F114pM121Q VARIANT OF PSEUDOMONAS
Aeruginosa Azurin In The Cu(Ii) State
pdb|3IN0|B Chain B, Crystal Structure Of The F114pM121Q VARIANT OF PSEUDOMONAS
Aeruginosa Azurin In The Cu(Ii) State
pdb|3IN0|C Chain C, Crystal Structure Of The F114pM121Q VARIANT OF PSEUDOMONAS
Aeruginosa Azurin In The Cu(Ii) State
pdb|3IN0|D Chain D, Crystal Structure Of The F114pM121Q VARIANT OF PSEUDOMONAS
Aeruginosa Azurin In The Cu(Ii) State
Length = 128
Score = 30.0 bits (66), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 12/93 (12%)
Query: 54 LYYEDCLPEDFTVFGYARTKLTDEELRNVIRKTLTCGIDKKYTKLDQFLKRCFYHSGLYN 113
L + LP++ V G+ T +++ V+ + G+DK Y K D R H+ L
Sbjct: 33 LSHPGNLPKN--VMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDD--SRVIAHTKLIG 88
Query: 114 S-EEHFAELD-SKLKEKEVGKLSNRLFYLSIPP 144
S E+ D SKLKE E + + PP
Sbjct: 89 SGEKDSVTFDVSKLKEGE------QYMFFCTPP 115
>pdb|3JTB|A Chain A, Cu(Ii) N47sF114N VARIANT OF PSEUDOMONAS AERUGINOSA AZURIN
pdb|3JTB|B Chain B, Cu(Ii) N47sF114N VARIANT OF PSEUDOMONAS AERUGINOSA AZURIN
pdb|3JTB|C Chain C, Cu(Ii) N47sF114N VARIANT OF PSEUDOMONAS AERUGINOSA AZURIN
pdb|3JTB|D Chain D, Cu(Ii) N47sF114N VARIANT OF PSEUDOMONAS AERUGINOSA AZURIN
Length = 128
Score = 30.0 bits (66), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 11/86 (12%)
Query: 60 LPEDFTVFGYARTKLTDEELRNVIRKTLTCGIDKKYTKLDQFLKRCFYHSGLYNS-EEHF 118
LP++ V G++ T +++ V+ + G+DK Y K D R H+ L S E+
Sbjct: 39 LPKN--VMGHSWVLSTAADMQGVVTDGMASGLDKDYLKPDD--SRVIAHTKLIGSGEKDS 94
Query: 119 AELD-SKLKEKEVGKLSNRLFYLSIP 143
D SKLKE E +F+ + P
Sbjct: 95 VTFDVSKLKEGE-----QYMFFCTNP 115
>pdb|1AZR|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Zinc Azurin
Mutant Asp47asp At 2.4 Angstroms Resolution
pdb|1AZR|B Chain B, Crystal Structure Of Pseudomonas Aeruginosa Zinc Azurin
Mutant Asp47asp At 2.4 Angstroms Resolution
pdb|1AZR|C Chain C, Crystal Structure Of Pseudomonas Aeruginosa Zinc Azurin
Mutant Asp47asp At 2.4 Angstroms Resolution
pdb|1AZR|D Chain D, Crystal Structure Of Pseudomonas Aeruginosa Zinc Azurin
Mutant Asp47asp At 2.4 Angstroms Resolution
Length = 128
Score = 30.0 bits (66), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 60 LPEDFTVFGYARTKLTDEELRNVIRKTLTCGIDKKYTKLDQFLKRCFYHSGLYNS-EEHF 118
LP++ V G+ T +++ V+ + G+DK Y K D R H+ L S E+
Sbjct: 39 LPKN--VMGHDWVLSTAADMQGVVTDGMASGLDKDYLKPDD--SRVIAHTKLIGSGEKDS 94
Query: 119 AELD-SKLKEKEVGKLSNRLFYLSIP 143
D SKLKE E +F+ + P
Sbjct: 95 VTFDVSKLKEGE-----QYMFFCTFP 115
>pdb|1XB6|A Chain A, The K24r Mutant Of Pseudomonas Aeruginosa Azurin
pdb|1XB6|B Chain B, The K24r Mutant Of Pseudomonas Aeruginosa Azurin
Length = 128
Score = 30.0 bits (66), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 60 LPEDFTVFGYARTKLTDEELRNVIRKTLTCGIDKKYTKLDQFLKRCFYHSGLYNS-EEHF 118
LP++ V G+ T +++ V+ + G+DK Y K D R H+ L S E+
Sbjct: 39 LPKN--VMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDD--SRVIAHTKLIGSGEKDS 94
Query: 119 AELD-SKLKEKEVGKLSNRLFYLSIP 143
D SKLKE E +F+ + P
Sbjct: 95 VTFDVSKLKEGE-----QYMFFCTFP 115
>pdb|1ETJ|A Chain A, Azurin Mutant With Met 121 Replaced By Glu
pdb|1ETJ|B Chain B, Azurin Mutant With Met 121 Replaced By Glu
pdb|1ETJ|C Chain C, Azurin Mutant With Met 121 Replaced By Glu
pdb|1ETJ|D Chain D, Azurin Mutant With Met 121 Replaced By Glu
Length = 128
Score = 30.0 bits (66), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 11/92 (11%)
Query: 60 LPEDFTVFGYARTKLTDEELRNVIRKTLTCGIDKKYTKLDQFLKRCFYHSGLYNS-EEHF 118
LP++ V G+ T +++ V+ + G+DK Y K D R H+ L S E+
Sbjct: 39 LPKN--VMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDD--SRVIAHTKLIGSGEKDS 94
Query: 119 AELD-SKLKEKEVGKLSNRLFYLSIPPNIFVE 149
D SKLKE E +F+ + P + +E
Sbjct: 95 VTFDVSKLKEGE-----QYMFFCTFPGHSALE 121
>pdb|1AZN|A Chain A, Crystal Structure Of The Azurin Mutant Phe114ala From
Pseudomonas Aeruginosa At 2.6 Angstroms Resolution
pdb|1AZN|B Chain B, Crystal Structure Of The Azurin Mutant Phe114ala From
Pseudomonas Aeruginosa At 2.6 Angstroms Resolution
pdb|1AZN|C Chain C, Crystal Structure Of The Azurin Mutant Phe114ala From
Pseudomonas Aeruginosa At 2.6 Angstroms Resolution
pdb|1AZN|D Chain D, Crystal Structure Of The Azurin Mutant Phe114ala From
Pseudomonas Aeruginosa At 2.6 Angstroms Resolution
Length = 128
Score = 30.0 bits (66), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 60 LPEDFTVFGYARTKLTDEELRNVIRKTLTCGIDKKYTKLDQFLKRCFYHSGLYNS-EEHF 118
LP++ V G+ T +++ V+ + G+DK Y K D R H+ L S E+
Sbjct: 39 LPKN--VMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDD--SRVIAHTKLIGSGEKDS 94
Query: 119 AELD-SKLKEKEVGKLSNRLFYLSIP 143
D SKLKE E +F+ + P
Sbjct: 95 VTFDVSKLKEGE-----QYMFFCTAP 115
>pdb|1JVL|A Chain A, Azurin Dimer, Covalently Crosslinked Through Bis-
Maleimidomethylether
pdb|1JVL|B Chain B, Azurin Dimer, Covalently Crosslinked Through Bis-
Maleimidomethylether
pdb|1JVO|A Chain A, Azurin Dimer, Crosslinked Via Disulfide Bridge
pdb|1JVO|B Chain B, Azurin Dimer, Crosslinked Via Disulfide Bridge
pdb|1JVO|C Chain C, Azurin Dimer, Crosslinked Via Disulfide Bridge
pdb|1JVO|D Chain D, Azurin Dimer, Crosslinked Via Disulfide Bridge
pdb|1JVO|E Chain E, Azurin Dimer, Crosslinked Via Disulfide Bridge
pdb|1JVO|F Chain F, Azurin Dimer, Crosslinked Via Disulfide Bridge
pdb|1JVO|G Chain G, Azurin Dimer, Crosslinked Via Disulfide Bridge
pdb|1JVO|H Chain H, Azurin Dimer, Crosslinked Via Disulfide Bridge
pdb|1JVO|I Chain I, Azurin Dimer, Crosslinked Via Disulfide Bridge
pdb|1JVO|J Chain J, Azurin Dimer, Crosslinked Via Disulfide Bridge
pdb|1JVO|K Chain K, Azurin Dimer, Crosslinked Via Disulfide Bridge
pdb|1JVO|L Chain L, Azurin Dimer, Crosslinked Via Disulfide Bridge
Length = 128
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Query: 66 VFGYARTKLTDEELRNVIRKTLTCGIDKKYTKLDQFLKRCFYHSGLYNS-EEHFAELD-S 123
V G+ T +++ V+ + G+DK Y K D R H+ L S E+ D S
Sbjct: 43 VMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDD--SRVIAHTKLIGSGEKDSVTFDVS 100
Query: 124 KLKEKEVGKLSNRLFYLSIP 143
KLKE E +F+ + P
Sbjct: 101 KLKEGE-----QYMFFCTFP 115
>pdb|3FQ1|A Chain A, Azurin C112dM121I
Length = 128
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 11/92 (11%)
Query: 54 LYYEDCLPEDFTVFGYARTKLTDEELRNVIRKTLTCGIDKKYTKLDQFLKRCFYHSGLYN 113
L + LP++ V G+ T +++ V+ + G+DK Y K D R H+ L
Sbjct: 33 LSHPGNLPKN--VMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDD--SRVIAHTKLIG 88
Query: 114 S-EEHFAELD-SKLKEKEVGKLSNRLFYLSIP 143
S E+ D SKLKE E +F+ + P
Sbjct: 89 SGEKDSVTFDVSKLKEGE-----QYMFFDTFP 115
>pdb|1AG0|A Chain A, Structure Of Cys 112 Asp Azurin From Pseudomonas
Aeruginosa
pdb|1AG0|B Chain B, Structure Of Cys 112 Asp Azurin From Pseudomonas
Aeruginosa
Length = 129
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 11/92 (11%)
Query: 54 LYYEDCLPEDFTVFGYARTKLTDEELRNVIRKTLTCGIDKKYTKLDQFLKRCFYHSGLYN 113
L + LP++ V G+ T +++ V+ + G+DK Y K D R H+ L
Sbjct: 34 LSHPGNLPKN--VMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDD--SRVIAHTKLIG 89
Query: 114 S-EEHFAELD-SKLKEKEVGKLSNRLFYLSIP 143
S E+ D SKLKE E +F+ + P
Sbjct: 90 SGEKDSVTFDVSKLKEGE-----QYMFFDTFP 116
>pdb|3FQY|A Chain A, Azurin C112d
Length = 128
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 11/92 (11%)
Query: 54 LYYEDCLPEDFTVFGYARTKLTDEELRNVIRKTLTCGIDKKYTKLDQFLKRCFYHSGLYN 113
L + LP++ V G+ T +++ V+ + G+DK Y K D R H+ L
Sbjct: 33 LSHPGNLPKN--VMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDD--SRVIAHTKLIG 88
Query: 114 S-EEHFAELD-SKLKEKEVGKLSNRLFYLSIP 143
S E+ D SKLKE E +F+ + P
Sbjct: 89 SGEKDSVTFDVSKLKEGE-----QYMFFDTFP 115
>pdb|3FPY|A Chain A, Azurin C112dM121L
Length = 128
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 11/92 (11%)
Query: 54 LYYEDCLPEDFTVFGYARTKLTDEELRNVIRKTLTCGIDKKYTKLDQFLKRCFYHSGLYN 113
L + LP++ V G+ T +++ V+ + G+DK Y K D R H+ L
Sbjct: 33 LSHPGNLPKN--VMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDD--SRVIAHTKLIG 88
Query: 114 S-EEHFAELD-SKLKEKEVGKLSNRLFYLSIP 143
S E+ D SKLKE E +F+ + P
Sbjct: 89 SGEKDSVTFDVSKLKEGE-----QYMFFDTFP 115
>pdb|3NP3|A Chain A, C112dM121E PSEUDOMONAS AERUGINOSA AZURIN
pdb|3NP4|A Chain A, C112dM121E PSEUDOMONAS AERUGINOSA AZURIN
pdb|3OQR|A Chain A, C112dM121E AZURIN, PH 10.0
Length = 128
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 11/98 (11%)
Query: 54 LYYEDCLPEDFTVFGYARTKLTDEELRNVIRKTLTCGIDKKYTKLDQFLKRCFYHSGLYN 113
L + LP++ V G+ T +++ V+ + G+DK Y K D R H+ L
Sbjct: 33 LSHPGNLPKN--VMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDD--SRVIAHTKLIG 88
Query: 114 S-EEHFAELD-SKLKEKEVGKLSNRLFYLSIPPNIFVE 149
S E+ D SKLKE E +F+ + P + +E
Sbjct: 89 SGEKDSVTFDVSKLKEGE-----QYMFFDTFPGHSALE 121
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 14/53 (26%)
Query: 140 LSIPPNIFVEVAKCASLRASSATGWTRVIVEKPIGRDSKSSGELTRSLKQYLR 192
L +PP ++KC +LR S G+ + +E+PIG+ R +Q+LR
Sbjct: 39 LKLPP-----LSKCEALRESLDLGFEGMCLEQPIGK---------RLFQQFLR 77
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 14/53 (26%)
Query: 140 LSIPPNIFVEVAKCASLRASSATGWTRVIVEKPIGRDSKSSGELTRSLKQYLR 192
L +PP ++KC +LR S G+ + +E+PIG+ R +Q+LR
Sbjct: 39 LKLPP-----LSKCEALRESLDLGFEGMCLEQPIGK---------RLFQQFLR 77
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 14/53 (26%)
Query: 140 LSIPPNIFVEVAKCASLRASSATGWTRVIVEKPIGRDSKSSGELTRSLKQYLR 192
L +PP ++KC +LR S G+ + +E+PIG+ R +Q+LR
Sbjct: 39 LKLPP-----LSKCEALRESLDLGFEGMCLEQPIGK---------RLFQQFLR 77
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 14/53 (26%)
Query: 140 LSIPPNIFVEVAKCASLRASSATGWTRVIVEKPIGRDSKSSGELTRSLKQYLR 192
L +PP ++KC +LR S G+ + +E+PIG+ R +Q+LR
Sbjct: 39 LKLPP-----LSKCEALRESLDLGFEGMCLEQPIGK---------RLFQQFLR 77
>pdb|3FQ2|A Chain A, Azurin C112dM121F
Length = 128
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 11/92 (11%)
Query: 54 LYYEDCLPEDFTVFGYARTKLTDEELRNVIRKTLTCGIDKKYTKLDQFLKRCFYHSGLYN 113
L + LP++ V G+ T +++ V+ + G+DK Y K D R H+ L
Sbjct: 33 LSHPGNLPKN--VMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDD--SRVIAHTKLIG 88
Query: 114 S-EEHFAELD-SKLKEKEVGKLSNRLFYLSIP 143
S E+ D SKLKE E +F+ + P
Sbjct: 89 SGEKDSVTFDVSKLKEGE-----QYMFFDTFP 115
>pdb|1ILU|A Chain A, X-Ray Crystal Structure The Two Site-Specific Mutants
Ile7ser And Phe110ser Of Azurin From Pseudomonas
Aeruginosa
pdb|1ILU|B Chain B, X-Ray Crystal Structure The Two Site-Specific Mutants
Ile7ser And Phe110ser Of Azurin From Pseudomonas
Aeruginosa
pdb|1ILU|C Chain C, X-Ray Crystal Structure The Two Site-Specific Mutants
Ile7ser And Phe110ser Of Azurin From Pseudomonas
Aeruginosa
pdb|1ILU|D Chain D, X-Ray Crystal Structure The Two Site-Specific Mutants
Ile7ser And Phe110ser Of Azurin From Pseudomonas
Aeruginosa
pdb|1ILU|E Chain E, X-Ray Crystal Structure The Two Site-Specific Mutants
Ile7ser And Phe110ser Of Azurin From Pseudomonas
Aeruginosa
pdb|1ILU|F Chain F, X-Ray Crystal Structure The Two Site-Specific Mutants
Ile7ser And Phe110ser Of Azurin From Pseudomonas
Aeruginosa
pdb|1ILU|G Chain G, X-Ray Crystal Structure The Two Site-Specific Mutants
Ile7ser And Phe110ser Of Azurin From Pseudomonas
Aeruginosa
pdb|1ILU|H Chain H, X-Ray Crystal Structure The Two Site-Specific Mutants
Ile7ser And Phe110ser Of Azurin From Pseudomonas
Aeruginosa
pdb|1ILU|I Chain I, X-Ray Crystal Structure The Two Site-Specific Mutants
Ile7ser And Phe110ser Of Azurin From Pseudomonas
Aeruginosa
pdb|1ILU|K Chain K, X-Ray Crystal Structure The Two Site-Specific Mutants
Ile7ser And Phe110ser Of Azurin From Pseudomonas
Aeruginosa
pdb|1ILU|L Chain L, X-Ray Crystal Structure The Two Site-Specific Mutants
Ile7ser And Phe110ser Of Azurin From Pseudomonas
Aeruginosa
pdb|1ILU|M Chain M, X-Ray Crystal Structure The Two Site-Specific Mutants
Ile7ser And Phe110ser Of Azurin From Pseudomonas
Aeruginosa
Length = 128
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 60 LPEDFTVFGYARTKLTDEELRNVIRKTLTCGIDKKYTKLDQFLKRCFYHSGLYNS-EEHF 118
LP++ V G+ T +++ V+ + G+DK Y K D R H+ L S E+
Sbjct: 39 LPKN--VMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDD--SRVIAHTKLIGSGEKDS 94
Query: 119 AELD-SKLKEKE 129
D SKLKE E
Sbjct: 95 VTFDVSKLKEGE 106
>pdb|2HX7|A Chain A, Crystal Structure Of Cu(ii) Azurin With The Metal-binding
Loop Sequence "ctfpghsalm" Replaced With "csphqgagm"
pdb|2HX7|B Chain B, Crystal Structure Of Cu(ii) Azurin With The Metal-binding
Loop Sequence "ctfpghsalm" Replaced With "csphqgagm"
pdb|2HX8|A Chain A, Crystal Structure Of Cu(I) Azurin With The Metal-Binding
Loop Sequence "ctfpghsalm" Replaced With "csphqgagm", At
Ph5
pdb|2HX8|B Chain B, Crystal Structure Of Cu(I) Azurin With The Metal-Binding
Loop Sequence "ctfpghsalm" Replaced With "csphqgagm", At
Ph5
pdb|2HX9|A Chain A, Crystal Structure Of Cu(i) Azurin With The Metal-binding
Loop Sequence "ctfpghsalm" Replaced With "csphqgagm", At
Ph4
pdb|2HX9|B Chain B, Crystal Structure Of Cu(i) Azurin With The Metal-binding
Loop Sequence "ctfpghsalm" Replaced With "csphqgagm", At
Ph4
pdb|2HXA|A Chain A, Crystal Structure Of Cu(I) Azurin With The Metal-Binding
Loop Sequence "ctfpghsalm" Replaced With "csphqgagm", At
Ph3.5
pdb|2HXA|B Chain B, Crystal Structure Of Cu(I) Azurin With The Metal-Binding
Loop Sequence "ctfpghsalm" Replaced With "csphqgagm", At
Ph3.5
Length = 127
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 54 LYYEDCLPEDFTVFGYARTKLTDEELRNVIRKTLTCGIDKKYTKLDQFLKRCFYHSGLYN 113
L + LP++ V G+ T +++ V+ + G+DK Y K D R H+ L
Sbjct: 33 LSHPGNLPKN--VMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDD--SRVIAHTKLIG 88
Query: 114 S-EEHFAELD-SKLKEKE 129
S E+ D SKLKE E
Sbjct: 89 SGEKDSVTFDVSKLKEGE 106
>pdb|3FS9|A Chain A, Pseudomonas Aeruginosa Azurin With Mutated Metal-Binding
Loop Sequence (Caahaam)
pdb|3FSA|A Chain A, Pseudomonas Aeruginosa Azurin With Mutated Metal-Binding
Loop Sequence (Caahaam); Chemically Reduced.
pdb|2XV0|A Chain A, Pseudomonas Aeruginosa Azurin With Mutated Metal-Binding
Loop Sequence (Caahaam), Chemically Reduced, Ph4.8
pdb|2XV2|A Chain A, Pseudomonas Aeruginosa Azurin With Mutated Metal-Binding
Loop Sequence (Caahaam), Chemically Reduced, Ph4.2
Length = 125
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 60 LPEDFTVFGYARTKLTDEELRNVIRKTLTCGIDKKYTKLDQFLKRCFYHSGLYNS-EEHF 118
LP++ V G+ T +++ V+ + G+DK Y K D R H+ L S E+
Sbjct: 39 LPKN--VMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDD--SRVIAHTKLIGSGEKDS 94
Query: 119 AELD-SKLKEKE 129
D SKLKE E
Sbjct: 95 VTFDVSKLKEGE 106
>pdb|2FT6|A Chain A, Structure Of Cu(Ii)azurin With The Metal-Binding Loop
Sequence "ctfpghsalm" Replaced With "ctphpm"
pdb|2FT7|A Chain A, Structure Of Cu(I)azurin At Ph 6, With The Metal-Binding
Loop Sequence "ctfpghsalm" Replaced With "ctphpm"
pdb|2FT8|A Chain A, Structure Of Cu(I)azurin, Ph8, With The Metal-Binding Loop
Sequence "ctfpghsalm" Replaced With "ctphpm"
Length = 124
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 60 LPEDFTVFGYARTKLTDEELRNVIRKTLTCGIDKKYTKLDQFLKRCFYHSGLYNS-EEHF 118
LP++ V G+ T +++ V+ + G+DK Y K D R H+ L S E+
Sbjct: 39 LPKN--VMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDD--SRVIAHTKLIGSGEKDS 94
Query: 119 AELD-SKLKEKE 129
D SKLKE E
Sbjct: 95 VTFDVSKLKEGE 106
>pdb|2FTA|A Chain A, Structure Of Cu(ii)azurin With The Metal-binding Loop
Sequence "ctfpghsalm" Replaced With "ctphpfm"
pdb|2FTA|B Chain B, Structure Of Cu(ii)azurin With The Metal-binding Loop
Sequence "ctfpghsalm" Replaced With "ctphpfm"
pdb|2FTA|C Chain C, Structure Of Cu(ii)azurin With The Metal-binding Loop
Sequence "ctfpghsalm" Replaced With "ctphpfm"
pdb|2FTA|D Chain D, Structure Of Cu(ii)azurin With The Metal-binding Loop
Sequence "ctfpghsalm" Replaced With "ctphpfm"
Length = 125
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 60 LPEDFTVFGYARTKLTDEELRNVIRKTLTCGIDKKYTKLDQFLKRCFYHSGLYNS-EEHF 118
LP++ V G+ T +++ V+ + G+DK Y K D R H+ L S E+
Sbjct: 39 LPKN--VMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDD--SRVIAHTKLIGSGEKDS 94
Query: 119 AELD-SKLKEKE 129
D SKLKE E
Sbjct: 95 VTFDVSKLKEGE 106
>pdb|3FSZ|A Chain A, Pseudomonas Aeruginosa Azurin With Mutated Metal-Binding
Loop Sequence (Caaaahaaaam)
pdb|3FSZ|B Chain B, Pseudomonas Aeruginosa Azurin With Mutated Metal-Binding
Loop Sequence (Caaaahaaaam)
pdb|3FT0|A Chain A, Pseudomonas Aeruginosa Azurin With Mutated Metal-Binding
Loop Sequence (Caaaahaaaam), Chemically Reduced
pdb|3FT0|B Chain B, Pseudomonas Aeruginosa Azurin With Mutated Metal-Binding
Loop Sequence (Caaaahaaaam), Chemically Reduced
pdb|2XV3|A Chain A, Pseudomonas Aeruginosa Azurin With Mutated Metal-Binding
Loop Sequence (Caaaahaaaam), Chemically Reduced, Ph5.3
pdb|2XV3|B Chain B, Pseudomonas Aeruginosa Azurin With Mutated Metal-Binding
Loop Sequence (Caaaahaaaam), Chemically Reduced, Ph5.3
Length = 129
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 60 LPEDFTVFGYARTKLTDEELRNVIRKTLTCGIDKKYTKLDQFLKRCFYHSGLYNS-EEHF 118
LP++ V G+ T +++ V+ + G+DK Y K D R H+ L S E+
Sbjct: 39 LPKN--VMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDD--SRVIAHTKLIGSGEKDS 94
Query: 119 AELD-SKLKEKE 129
D SKLKE E
Sbjct: 95 VTFDVSKLKEGE 106
>pdb|3FSW|A Chain A, Pseudomonas Aeruginosa Azurin With Mutated Metal-Binding
Loop Sequence (Caaaahaaam)
pdb|3FSW|B Chain B, Pseudomonas Aeruginosa Azurin With Mutated Metal-Binding
Loop Sequence (Caaaahaaam)
pdb|3FSW|C Chain C, Pseudomonas Aeruginosa Azurin With Mutated Metal-Binding
Loop Sequence (Caaaahaaam)
pdb|3FSW|D Chain D, Pseudomonas Aeruginosa Azurin With Mutated Metal-Binding
Loop Sequence (Caaaahaaam)
Length = 128
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 60 LPEDFTVFGYARTKLTDEELRNVIRKTLTCGIDKKYTKLDQFLKRCFYHSGLYNS-EEHF 118
LP++ V G+ T +++ V+ + G+DK Y K D R H+ L S E+
Sbjct: 39 LPKN--VMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDD--SRVIAHTKLIGSGEKDS 94
Query: 119 AELD-SKLKEKE 129
D SKLKE E
Sbjct: 95 VTFDVSKLKEGE 106
>pdb|3FSV|A Chain A, Pseudomonas Aeruginosa Azurin With Mutated Metal-Binding
Loop Sequence (Caaahaaam)
Length = 127
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 60 LPEDFTVFGYARTKLTDEELRNVIRKTLTCGIDKKYTKLDQFLKRCFYHSGLYNS-EEHF 118
LP++ V G+ T +++ V+ + G+DK Y K D R H+ L S E+
Sbjct: 39 LPKN--VMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDD--SRVIAHTKLIGSGEKDS 94
Query: 119 AELD-SKLKEKE 129
D SKLKE E
Sbjct: 95 VTFDVSKLKEGE 106
>pdb|1CC3|A Chain A, Purple Cua Center
pdb|1CC3|B Chain B, Purple Cua Center
Length = 130
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 60 LPEDFTVFGYARTKLTDEELRNVIRKTLTCGIDKKYTKLDQFLKRCFYHSGLYNS-EEHF 118
LP++ V G+ T +++ V+ + G+DK Y K D R H+ L S E+
Sbjct: 39 LPKN--VMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDD--SRVIAHTKLIGSGEKDS 94
Query: 119 AELD-SKLKEKE 129
D SKLKE E
Sbjct: 95 VTFDVSKLKEGE 106
>pdb|1M53|A Chain A, Crystal Structure Of Isomaltulose Synthase (Pali) From
Klebsiella Sp. Lx3
Length = 570
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 6/70 (8%)
Query: 3 GKPVANNHSEPQEIEASVPASSEKAGSTLSITFVGASGDLAKKKIFPALFALYYEDCLPE 62
GKP H P +E + + S L+ + + PAL Y+D P+
Sbjct: 448 GKPWF--HINPNYVEINAEREETREDSVLNY----YKKMIQLRHHIPALVYGAYQDLNPQ 501
Query: 63 DFTVFGYART 72
D TV+ Y RT
Sbjct: 502 DNTVYAYTRT 511
>pdb|2VYE|A Chain A, Crystal Structure Of The Dnac-Ssdna Complex
pdb|2VYE|B Chain B, Crystal Structure Of The Dnac-Ssdna Complex
pdb|2VYF|A Chain A, Crystal Structure Of The Dnac
pdb|2VYF|B Chain B, Crystal Structure Of The Dnac
Length = 454
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 130 VGKLSNRLFYLSIPPNIFVE--VAKCASLRASSATGWTRVIVEKPI---GRDSKSS---- 180
+G LSN Y+ P+I V AKC L+ S G + + I GR+ ++
Sbjct: 280 MGSLSNAGIYIDDTPSIRVSDIRAKCRRLKQESGLGMVVIDYLQLIQGSGRNRENRQQEV 339
Query: 181 GELTRSLKQYLRE 193
E++RSLK RE
Sbjct: 340 SEISRSLKALARE 352
>pdb|2XHC|A Chain A, Crystal Structure Of Thermotoga Maritima N-utilization
Substance G (nusg)
Length = 352
Score = 26.9 bits (58), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 13/73 (17%)
Query: 69 YARTKLTDEELRNVIRKTLTCGIDKKYTKLDQFLKRCFYHSGLY------------NSEE 116
YAR +++NV RK + ID+KYTK + GL +EE
Sbjct: 84 YARRSGVIVDVKNV-RKIVVETIDRKYTKTYYIPESAGIEPGLRVGTKVKQGLPLSKNEE 142
Query: 117 HFAELDSKLKEKE 129
+ ELD K+ E E
Sbjct: 143 YICELDGKIVEIE 155
>pdb|2R6A|A Chain A, Crystal Form Bh1
pdb|2R6A|B Chain B, Crystal Form Bh1
pdb|2R6E|A Chain A, Crystal Form B2
pdb|2R6E|B Chain B, Crystal Form B2
pdb|2R6C|A Chain A, Crystal Form Bh2
pdb|2R6C|B Chain B, Crystal Form Bh2
pdb|2R6C|C Chain C, Crystal Form Bh2
pdb|2R6C|D Chain D, Crystal Form Bh2
pdb|2R6C|E Chain E, Crystal Form Bh2
pdb|2R6C|F Chain F, Crystal Form Bh2
pdb|2R6D|A Chain A, Crystal Form B1
pdb|2R6D|B Chain B, Crystal Form B1
pdb|2R6D|C Chain C, Crystal Form B1
pdb|2R6D|D Chain D, Crystal Form B1
pdb|2R6D|E Chain E, Crystal Form B1
pdb|2R6D|F Chain F, Crystal Form B1
pdb|4ESV|A Chain A, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|B Chain B, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|C Chain C, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|D Chain D, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|E Chain E, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|F Chain F, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|G Chain G, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|H Chain H, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|I Chain I, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|J Chain J, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|K Chain K, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|L Chain L, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
Length = 454
Score = 26.9 bits (58), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 9/73 (12%)
Query: 130 VGKLSNRLFYLSIPPNIFVE--VAKCASLRASSATGWTRVIVEKPI---GRDSKSS---- 180
+G LSN Y+ P+I V AKC L+ S G + + I GR ++
Sbjct: 280 MGSLSNAGIYIDDTPSIRVSDIRAKCRRLKQESGLGMIVIDYLQLIQGSGRSKENRQQEV 339
Query: 181 GELTRSLKQYLRE 193
E++RSLK RE
Sbjct: 340 SEISRSLKALARE 352
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.133 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,541,994
Number of Sequences: 62578
Number of extensions: 212342
Number of successful extensions: 542
Number of sequences better than 100.0: 56
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 516
Number of HSP's gapped (non-prelim): 56
length of query: 197
length of database: 14,973,337
effective HSP length: 94
effective length of query: 103
effective length of database: 9,091,005
effective search space: 936373515
effective search space used: 936373515
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 49 (23.5 bits)