Your job contains 1 sequence.
>038639
MLAPNKPLYSTDPTSIELLNTQVALYPKCSHNSNRLWPFLFVSSPTITKTQTRTRTHDAK
PQFETFDSNNNDYFKPIRGQELELVCESLAYKGKGVCKVADTGFVVLCDRVLPGEKFIGR
VTRKKGSYAEMEFSFGPKRWFPKESLPKRGDHIENYALGLHAPGFFDKVLNIDKCLLQSE
PANLVLAAVQDYWRDPQLGLSPYDVHSHSGFLKHLMLRTGSFMICAPVM
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038639
(229 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2094776 - symbol:AT3G21300 species:3702 "Arabi... 383 5.0e-58 2
UNIPROTKB|O31503 - symbol:rlmCD "23S rRNA (uracil-C(5))-m... 82 0.00016 2
>TAIR|locus:2094776 [details] [associations]
symbol:AT3G21300 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0008173 "RNA methyltransferase activity" evidence=IEA;ISS]
InterPro:IPR001566 InterPro:IPR010280 Pfam:PF05958 PROSITE:PS01231
EMBL:CP002686 EMBL:AB023045 GO:GO:0003723 GO:GO:0006396
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
TIGRFAMs:TIGR00479 GO:GO:0008173 GO:GO:0001510 KO:K00599
InterPro:IPR002792 PROSITE:PS50926 OMA:FFQVNPV IPI:IPI00516831
RefSeq:NP_188767.2 UniGene:At.38085 ProteinModelPortal:Q9LU28
SMR:Q9LU28 STRING:Q9LU28 PRIDE:Q9LU28 EnsemblPlants:AT3G21300.1
GeneID:821684 KEGG:ath:AT3G21300 TAIR:At3g21300 PhylomeDB:Q9LU28
ProtClustDB:CLSN2680853 Genevestigator:Q9LU28 Uniprot:Q9LU28
Length = 554
Score = 383 (139.9 bits), Expect = 5.0e-58, Sum P(2) = 5.0e-58
Identities = 71/91 (78%), Positives = 78/91 (85%)
Query: 130 EMEFSFGPKRWFPKESLPKRGDHIENYALGLHAPGFFDKVLNIDKCLLQSEPANLVLAAV 189
+MEFSFGP+RW P E L +R D +N+ALGLHAPGFFDKVLN+DKCLLQSEP NLVLAAV
Sbjct: 202 KMEFSFGPQRWLPIEMLNERQDGPKNFALGLHAPGFFDKVLNVDKCLLQSEPGNLVLAAV 261
Query: 190 QDYWRDPQLGLSPYDVHSHSGFLKHLMLRTG 220
QD WRDP+L LSPYD SH GFLKHLMLRTG
Sbjct: 262 QDCWRDPELSLSPYDCRSHVGFLKHLMLRTG 292
Score = 231 (86.4 bits), Expect = 5.0e-58, Sum P(2) = 5.0e-58
Identities = 40/58 (68%), Positives = 51/58 (87%)
Query: 74 FKPIRGQELELVCESLAYKGKGVCKVADTGFVVLCDRVLPGEKFIGRVTRKKGSYAEM 131
+ P RG+ +ELVCESL +KGKG+CKV TG+VV+CDR LPGE+F+GRVTR+KGSYAE+
Sbjct: 65 YYPKRGETVELVCESLGFKGKGICKVDGTGYVVMCDRALPGERFLGRVTRRKGSYAEV 122
>UNIPROTKB|O31503 [details] [associations]
symbol:rlmCD "23S rRNA (uracil-C(5))-methyltransferase
RlmCD" species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0031167 "rRNA methylation" evidence=IDA] [GO:0070041 "rRNA
(uridine-C5-)-methyltransferase activity" evidence=IDA]
InterPro:IPR001566 InterPro:IPR010280 Pfam:PF05958 PROSITE:PS01230
PROSITE:PS01231 GO:GO:0046872 GO:GO:0051539 GO:GO:0003723
EMBL:AL009126 GenomeReviews:AL009126_GR Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 eggNOG:COG2265 GO:GO:0070041
TIGRFAMs:TIGR00479 InterPro:IPR002792 PROSITE:PS50926 Pfam:PF01938
PIR:E69793 RefSeq:NP_388555.1 ProteinModelPortal:O31503 SMR:O31503
EnsemblBacteria:EBBACT00000001048 GeneID:936060 KEGG:bsu:BSU06730
PATRIC:18972992 GenoList:BSU06730 HOGENOM:HOG000029867 KO:K03215
OMA:FFQVNPV ProtClustDB:CLSK872793 BioCyc:BSUB:BSU06730-MONOMER
Uniprot:O31503
Length = 459
Score = 82 (33.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 23/74 (31%), Positives = 40/74 (54%)
Query: 159 GLHAPGFFDK----VLNIDKCLLQSEPANLVLAAVQDYWRDPQLGLSPYDVHSHSGFLKH 214
GL A GF+ + ++++ CL+Q + + AV+D + G+ Y+ H G+L+H
Sbjct: 147 GLVA-GFYQQRSHDIIDMSACLIQQSKNDEAVQAVKDICAN--YGVKAYNEERHKGWLRH 203
Query: 215 LMLR----TGSFMI 224
+M+R TG MI
Sbjct: 204 IMVRYGVVTGEMMI 217
Score = 77 (32.2 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 29/78 (37%), Positives = 38/78 (48%)
Query: 76 PIRGQEL-ELVCESLAYKGKGVCKVADTGFVVLCDRVLPGEKFIGRVTR-KKGSYAEMEF 133
P+ E ++ E L ++G GV KV GF + LP EK +VTR KKG F
Sbjct: 6 PVEKNEYYDVTFEDLTHEGAGVAKVQ--GFPIFVPNALPEEKAQIKVTRVKKG------F 57
Query: 134 SFGPKRWFPKESLPKRGD 151
+FG +ES P R D
Sbjct: 58 AFGRLIELKEES-PHRTD 74
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.139 0.440 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 229 218 0.00091 112 3 11 22 0.37 33
32 0.39 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2
No. of states in DFA: 609 (65 KB)
Total size of DFA: 197 KB (2112 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.81u 0.14s 16.95t Elapsed: 00:00:01
Total cpu time: 16.81u 0.14s 16.95t Elapsed: 00:00:01
Start: Mon May 20 19:15:05 2013 End: Mon May 20 19:15:06 2013