BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>038643
NVGVVADISASVDWLKANGSKKVGMVGYCMGSALTIACSASLMERKHTFRMN

High Scoring Gene Products

Symbol, full name Information P value
AT2G32520 protein from Arabidopsis thaliana 8.0e-09

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  038643
        (52 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2060257 - symbol:AT2G32520 species:3702 "Arabi...   134  8.0e-09   1


>TAIR|locus:2060257 [details] [associations]
            symbol:AT2G32520 species:3702 "Arabidopsis thaliana"
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008152 "metabolic
            process" evidence=IEA] [GO:0016747 "transferase activity,
            transferring acyl groups other than amino-acyl groups"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA;ISS]
            [GO:0009507 "chloroplast" evidence=IDA] [GO:0010043 "response to
            zinc ion" evidence=IEP] [GO:0005829 "cytosol" evidence=IDA]
            InterPro:IPR002925 InterPro:IPR020610 Pfam:PF01738 PROSITE:PS00099
            GO:GO:0005829 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0016747 GO:GO:0010043 GO:GO:0016787 eggNOG:COG0412 KO:K01061
            EMBL:AC004681 EMBL:BT006416 EMBL:AK227683 IPI:IPI00528191
            PIR:T02551 RefSeq:NP_180811.1 UniGene:At.38061 HSSP:P11453
            ProteinModelPortal:O80889 SMR:O80889 PaxDb:O80889 PRIDE:O80889
            ProMEX:O80889 EnsemblPlants:AT2G32520.1 GeneID:817813
            KEGG:ath:AT2G32520 TAIR:At2g32520 HOGENOM:HOG000157121
            InParanoid:O80889 OMA:VQGHWAT PhylomeDB:O80889
            ProtClustDB:CLSN2683402 ArrayExpress:O80889 Genevestigator:O80889
            Uniprot:O80889
        Length = 239

 Score = 134 (52.2 bits), Expect = 8.0e-09, P = 8.0e-09
 Identities = 26/42 (61%), Positives = 31/42 (73%)

Query:     3 GVVADISASVDWLKANGSKKVGMVGYCMGSALTIACSASLME 44
             G + DI ASV+WLK+NGSKKVG+ G CMG AL IA S  + E
Sbjct:    88 GAIKDIRASVNWLKSNGSKKVGVTGMCMGGALAIASSVLVPE 129


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.128   0.383    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       52        52   0.00091  102 3  11 22  0.37    27
                                                     29  0.47    26


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  481 (51 KB)
  Total size of DFA:  81 KB (2063 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  5.27u 0.24s 5.51t   Elapsed:  00:00:01
  Total cpu time:  5.27u 0.24s 5.51t   Elapsed:  00:00:01
  Start:  Mon May 20 19:18:20 2013   End:  Mon May 20 19:18:21 2013

Back to top