BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038647
(289 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 157 bits (397), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 138/251 (54%), Gaps = 6/251 (2%)
Query: 1 LSSQSGQGLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSL-DCFLFD 58
L + QG E +F+ E+ +I+ HRNL+RL G C+ E++L+Y YM N S+ C
Sbjct: 70 LKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRER 129
Query: 59 PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
P L W R RI G A+GL YLH + ++IHRD+KA+NILLD + DFG+A
Sbjct: 130 PESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 189
Query: 119 RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKN---AHF 175
+L + + GT G+++PEY G S K+DVF +GV++LE ++ ++ A
Sbjct: 190 KLMDYKDXHVXXA-VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARL 248
Query: 176 YNTDSLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTML 235
N D + LL L + + L+D LQ + + + I VALLC Q + +RP M
Sbjct: 249 ANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMS 308
Query: 236 EVISMLTNENV 246
EV+ ML + +
Sbjct: 309 EVVRMLEGDGL 319
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 155 bits (391), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/251 (36%), Positives = 137/251 (54%), Gaps = 6/251 (2%)
Query: 1 LSSQSGQGLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSL-DCFLFD 58
L + QG E +F+ E+ +I+ HRNL+RL G C+ E++L+Y YM N S+ C
Sbjct: 62 LKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRER 121
Query: 59 PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
P L W R RI G A+GL YLH + ++IHRD+KA+NILLD + DFG+A
Sbjct: 122 PESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 181
Query: 119 RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKN---AHF 175
+L + + G G+++PEY G S K+DVF +GV++LE ++ ++ A
Sbjct: 182 KLMDYKDXHVXXA-VRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARL 240
Query: 176 YNTDSLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTML 235
N D + LL L + + L+D LQ + + + I VALLC Q + +RP M
Sbjct: 241 ANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMS 300
Query: 236 EVISMLTNENV 246
EV+ ML + +
Sbjct: 301 EVVRMLEGDGL 311
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 137 bits (344), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 92/243 (37%), Positives = 145/243 (59%), Gaps = 13/243 (5%)
Query: 2 SSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFD--- 58
+ +S QG+EEF+ E+ ++ +H +LV L G C E E ILIY+YM N +L L+
Sbjct: 72 TPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDL 131
Query: 59 PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
PT + + WE R+ I G A+GL YLH + +IHRD+K+ NILLD N PKI+DFGI+
Sbjct: 132 PTMS--MSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGIS 186
Query: 119 RLFGGDEL-QSNTKRIV-GTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKN-AHF 175
+ G EL Q++ +V GT GY+ PEY ++G + KSDV+SFGV++ E L ++
Sbjct: 187 K--KGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQS 244
Query: 176 YNTDSLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTML 235
+ + L A N+G+ +++D L + L ++ + A+ C+ ++ DRP+M
Sbjct: 245 LPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMG 304
Query: 236 EVI 238
+V+
Sbjct: 305 DVL 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 137 bits (344), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 92/243 (37%), Positives = 145/243 (59%), Gaps = 13/243 (5%)
Query: 2 SSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFD--- 58
+ +S QG+EEF+ E+ ++ +H +LV L G C E E ILIY+YM N +L L+
Sbjct: 72 TPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDL 131
Query: 59 PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
PT + + WE R+ I G A+GL YLH + +IHRD+K+ NILLD N PKI+DFGI+
Sbjct: 132 PTMS--MSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGIS 186
Query: 119 RLFGGDEL-QSNTKRIV-GTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKN-AHF 175
+ G EL Q++ +V GT GY+ PEY ++G + KSDV+SFGV++ E L ++
Sbjct: 187 K--KGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQS 244
Query: 176 YNTDSLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTML 235
+ + L A N+G+ +++D L + L ++ + A+ C+ ++ DRP+M
Sbjct: 245 LPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMG 304
Query: 236 EVI 238
+V+
Sbjct: 305 DVL 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 120/232 (51%), Gaps = 5/232 (2%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
++F E+ ++AK QH NLV L G + + L+Y YMPN SL L T L W M
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN 129
R +I +G A G+ +LH IHRD+K++NILLD KISDFG+AR
Sbjct: 135 RCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAWN 189
RIVGT YM+PE ALRG + KSD++SFGV++LE ++ + L L
Sbjct: 192 XSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEI 250
Query: 190 LWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISML 241
+ + +D + NDA + +VA C+ E RP + +V +L
Sbjct: 251 EDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 120/232 (51%), Gaps = 5/232 (2%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
++F E+ ++AK QH NLV L G + + L+Y YMPN SL L T L W M
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN 129
R +I +G A G+ +LH IHRD+K++NILLD KISDFG+AR
Sbjct: 135 RCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAWN 189
RIVGT YM+PE ALRG + KSD++SFGV++LE ++ + L L
Sbjct: 192 XXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEI 250
Query: 190 LWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISML 241
+ + +D + NDA + +VA C+ E RP + +V +L
Sbjct: 251 EDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 120/232 (51%), Gaps = 5/232 (2%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
++F E+ ++AK QH NLV L G + + L+Y YMPN SL L T L W M
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 128
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN 129
R +I +G A G+ +LH IHRD+K++NILLD KISDFG+AR
Sbjct: 129 RCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVM 185
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAWN 189
RIVGT YM+PE ALRG + KSD++SFGV++LE ++ + L L
Sbjct: 186 XXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEI 244
Query: 190 LWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISML 241
+ + +D + NDA + +VA C+ E RP + +V +L
Sbjct: 245 EDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 295
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 115/232 (49%), Gaps = 5/232 (2%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
++F E+ + AK QH NLV L G + + L+Y Y PN SL L T L W
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHX 125
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN 129
R +I +G A G+ +LH IHRD+K++NILLD KISDFG+AR
Sbjct: 126 RCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVX 182
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAWN 189
RIVGT Y +PE ALRG + KSD++SFGV++LE ++ + L L
Sbjct: 183 XSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEI 241
Query: 190 LWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISML 241
+ + +D NDA + +VA C+ E RP + +V +L
Sbjct: 242 EDEEKTIEDYIDK-KXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLL 292
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 111/236 (47%), Gaps = 26/236 (11%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E+F E ++ KL H LV+L+G C+E L++E+M + L +L T+ GL E
Sbjct: 47 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAET 104
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN 129
+ + V +G+ YL S VIHRDL A N L+ N K+SDFG+ R D+ S+
Sbjct: 105 LLGMCLDVCEGMAYLEEAS---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 161
Query: 130 TKRIVGT---YGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGH 186
T GT + SPE +S KSDV+SFGVL+ E S K + ++S +
Sbjct: 162 T----GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE-- 215
Query: 187 AWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISMLT 242
+ + L L + Y ++N C +E DRP ++ L
Sbjct: 216 -----DISTGFRLYKPRLASTHVYQIMNH-------CWKERPEDRPAFSRLLRQLA 259
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 110/237 (46%), Gaps = 26/237 (10%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E+F E ++ KL H LV+L+G C+E L++E+M + L +L T+ GL E
Sbjct: 45 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAET 102
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN 129
+ + V +G+ YL VIHRDL A N L+ N K+SDFG+ R D+ S+
Sbjct: 103 LLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 159
Query: 130 TKRIVGT---YGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGH 186
T GT + SPE +S KSDV+SFGVL+ E S K + ++S +
Sbjct: 160 T----GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE-- 213
Query: 187 AWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISMLTN 243
+ + L L + Y ++N C +E DRP ++ L
Sbjct: 214 -----DISTGFRLYKPRLASTHVYQIMNH-------CWKERPEDRPAFSRLLRQLAE 258
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 110/237 (46%), Gaps = 26/237 (10%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E+F E ++ KL H LV+L+G C+E L++E+M + L +L T+ GL E
Sbjct: 47 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAET 104
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN 129
+ + V +G+ YL VIHRDL A N L+ N K+SDFG+ R D+ S+
Sbjct: 105 LLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 161
Query: 130 TKRIVGT---YGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGH 186
T GT + SPE +S KSDV+SFGVL+ E S K + ++S +
Sbjct: 162 T----GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE-- 215
Query: 187 AWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISMLTN 243
+ + L L + Y ++N C +E DRP ++ L
Sbjct: 216 -----DISTGFRLYKPRLASTHVYQIMNH-------CWKERPEDRPAFSRLLRQLAE 260
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 110/237 (46%), Gaps = 26/237 (10%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E+F E ++ KL H LV+L+G C+E L++E+M + L +L T+ GL E
Sbjct: 50 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAET 107
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN 129
+ + V +G+ YL VIHRDL A N L+ N K+SDFG+ R D+ S+
Sbjct: 108 LLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 164
Query: 130 TKRIVGT---YGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGH 186
T GT + SPE +S KSDV+SFGVL+ E S K + ++S +
Sbjct: 165 T----GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE-- 218
Query: 187 AWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISMLTN 243
+ + L L + Y ++N C +E DRP ++ L
Sbjct: 219 -----DISTGFRLYKPRLASTHVYQIMNH-------CWRERPEDRPAFSRLLRQLAE 263
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 110/237 (46%), Gaps = 26/237 (10%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
++F E ++ KL H LV+L+G C+E L++E+M + L +L T+ GL E
Sbjct: 67 DDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAET 124
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN 129
+ + V +G+ YL VIHRDL A N L+ N K+SDFG+ R D+ S+
Sbjct: 125 LLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 181
Query: 130 TKRIVGT---YGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGH 186
T GT + SPE +S KSDV+SFGVL+ E S K + ++S +
Sbjct: 182 T----GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE-- 235
Query: 187 AWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISMLTN 243
+ + L L + Y ++N C +E DRP ++ L
Sbjct: 236 -----DISTGFRLYKPRLASTHVYQIMNH-------CWKERPEDRPAFSRLLRQLAE 280
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 109/237 (45%), Gaps = 26/237 (10%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E+F E ++ KL H LV+L+G C+E L+ E+M + L +L T+ GL E
Sbjct: 48 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYL--RTQRGLFAAET 105
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN 129
+ + V +G+ YL VIHRDL A N L+ N K+SDFG+ R D+ S+
Sbjct: 106 LLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 162
Query: 130 TKRIVGT---YGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGH 186
T GT + SPE +S KSDV+SFGVL+ E S K + ++S +
Sbjct: 163 T----GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE-- 216
Query: 187 AWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISMLTN 243
+ + L L + Y ++N C +E DRP ++ L
Sbjct: 217 -----DISTGFRLYKPRLASTHVYQIMNH-------CWRERPEDRPAFSRLLRQLAE 261
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 43/252 (17%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
+F +E ++ + H N++RL G +++ EYM N SLD FL T G
Sbjct: 96 DFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR--THDGQFTIMQL 153
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNT 130
V +L GV G+ YL S L +HRDL A N+L+DSN+ K+SDFG++R+ D + T
Sbjct: 154 VGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXT 210
Query: 131 KRIVGTYG-----YMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLG 185
T G + +PE FS SDV+SFGV++ E L+ + +
Sbjct: 211 T----TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPY----------- 255
Query: 186 HAWNLWNDGRAWELMDSILQNDASY----PMLNRYI--NVALLCVQENAADRPTMLEVIS 239
WN+ N D I + Y PM + + L C ++ A RP +++S
Sbjct: 256 --WNMTN-------RDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVS 306
Query: 240 MLTNENVILPSP 251
+L + ++ SP
Sbjct: 307 VL---DALIRSP 315
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 117/237 (49%), Gaps = 30/237 (12%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
+F E ++ + H N++RL G ++ ++I EYM N +LD FL + K G
Sbjct: 92 DFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLRE--KDGEFSVLQL 149
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGD-ELQSN 129
V +L G+A G+ YL + + +HRDL A NIL++SN+ K+SDFG++R+ D E
Sbjct: 150 VGMLRGIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYT 206
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAWN 189
T + +PE F+ SDV+SFG+++ E ++ + + W
Sbjct: 207 TSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPY-------------WE 253
Query: 190 LWNDGRAWELMDSILQNDA---SYPM--LNRYINVALLCVQENAADRPTMLEVISML 241
L N E+M +I ND PM + + + C Q+ A RP +++S+L
Sbjct: 254 LSNH----EVMKAI--NDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSIL 304
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 43/252 (17%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
+F +E ++ + H N++RL G +++ EYM N SLD FL T G
Sbjct: 96 DFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR--THDGQFTIMQL 153
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNT 130
V +L GV G+ YL S L +HRDL A N+L+DSN+ K+SDFG++R+ D + T
Sbjct: 154 VGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYT 210
Query: 131 KRIVGTYG-----YMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLG 185
T G + +PE FS SDV+SFGV++ E L+ + +
Sbjct: 211 T----TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPY----------- 255
Query: 186 HAWNLWNDGRAWELMDSILQNDASY----PMLNRYI--NVALLCVQENAADRPTMLEVIS 239
WN+ N D I + Y PM + + L C ++ A RP +++S
Sbjct: 256 --WNMTN-------RDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVS 306
Query: 240 MLTNENVILPSP 251
+L + ++ SP
Sbjct: 307 VL---DALIRSP 315
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 96/172 (55%), Gaps = 19/172 (11%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E F E ++ KL+H LV+L+ E I+I EYM SL FL G +G +
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFL-----KGEMGKYL 111
Query: 70 R----VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDE 125
R V + +A G+ Y+ R+ +HRDL+A+NIL+ N+ K++DFG+ARL +E
Sbjct: 112 RLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
Query: 126 LQSNTKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHF 175
T R + + +PE AL G F+IKSDV+SFG+L+ E L++K +
Sbjct: 169 ---XTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPY 216
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 96/172 (55%), Gaps = 19/172 (11%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E F E ++ KL+H LV+L+ E I+I EYM SL FL G +G +
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFL-----KGEMGKYL 111
Query: 70 R----VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDE 125
R V + +A G+ Y+ R+ +HRDL+A+NIL+ N+ K++DFG+ARL +E
Sbjct: 112 RLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
Query: 126 LQSNTKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHF 175
T R + + +PE AL G F+IKSDV+SFG+L+ E L++K +
Sbjct: 169 Y---TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPY 216
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 114/240 (47%), Gaps = 36/240 (15%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL--FDPTKTGLLGWE 68
+F E ++ + H N++RL G + +++ EYM N SLD FL D T +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---- 147
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
V +L G+A G+ YL S + +HRDL A NIL++SN+ K+SDFG+AR+ D +
Sbjct: 148 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAA 204
Query: 129 NTKRIVG-TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHA 187
T R + SPE F+ SDV+S+G+++ E +S + +
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY------------- 251
Query: 188 WNLWNDGRAWELMDSILQNDASY----PM--LNRYINVALLCVQENAADRPTMLEVISML 241
W + N D I D Y PM + L C Q++ +RP +++S+L
Sbjct: 252 WEMSN-------QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 91/163 (55%), Gaps = 20/163 (12%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCFLFDPTKTGLLGWE 68
E F E ++ KL+H LV+L+ E E I ++ EYM SL FL G G
Sbjct: 307 EAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVTEYMSKGSLLDFL-----KGETGKY 359
Query: 69 MR----VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGD 124
+R V + +A G+ Y+ R+ +HRDL+A+NIL+ N+ K++DFG+ARL +
Sbjct: 360 LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 416
Query: 125 ELQSNTKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLE 165
E T R + + +PE AL G F+IKSDV+SFG+L+ E
Sbjct: 417 EY---TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 456
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 97/173 (56%), Gaps = 21/173 (12%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCFLFDPTKTGLLGWE 68
E F E ++ KL+H LV+L+ E E I ++ EYM SL FL G +G
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVTEYMSKGSLLDFL-----KGEMGKY 110
Query: 69 MR----VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGD 124
+R V + +A G+ Y+ R+ +HRDL+A+NIL+ N+ K++DFG+ARL +
Sbjct: 111 LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 167
Query: 125 ELQSNTKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHF 175
E T R + + +PE AL G F+IKSDV+SFG+L+ E L++K +
Sbjct: 168 EY---TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPY 216
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 97/173 (56%), Gaps = 21/173 (12%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCFLFDPTKTGLLGWE 68
E F E ++ KL+H LV+L+ E E I ++ EYM SL FL G +G
Sbjct: 49 EAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVTEYMSKGSLLDFL-----KGEMGKY 101
Query: 69 MR----VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGD 124
+R V + +A G+ Y+ R+ +HRDL+A+NIL+ N+ K++DFG+ARL +
Sbjct: 102 LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 158
Query: 125 ELQSNTKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHF 175
E T R + + +PE AL G F+IKSDV+SFG+L+ E L++K +
Sbjct: 159 EY---TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPY 207
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 96/189 (50%), Gaps = 26/189 (13%)
Query: 7 QGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFD---PTKTG 63
Q +E + E L A L+H N++ L G C++ L+ E+ L+ L P
Sbjct: 48 QTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDI- 106
Query: 64 LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILL--------DSNMNPKISDF 115
L+ W +++ A+G+ YLH + + +IHRDLK+SNIL+ SN KI+DF
Sbjct: 107 LVNWAVQI------ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160
Query: 116 GIARLFGGDELQSNTK-RIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAH 174
G+AR E TK G Y +M+PE +FS SDV+S+GVL+ E L+ +
Sbjct: 161 GLAR-----EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE--VP 213
Query: 175 FYNTDSLTL 183
F D L +
Sbjct: 214 FRGIDGLAV 222
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 95/172 (55%), Gaps = 19/172 (11%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E F E ++ KL+H LV+L+ E I + EYM SL FL G +G +
Sbjct: 47 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFL-----KGEMGKYL 100
Query: 70 R----VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDE 125
R V + +A G+ Y+ R+ +HRDL+A+NIL+ N+ K++DFG+ARL +E
Sbjct: 101 RLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 157
Query: 126 LQSNTKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHF 175
T R + + +PE AL G F+IKSDV+SFG+L+ E L++K +
Sbjct: 158 Y---TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPY 205
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 17/195 (8%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLF--- 57
L S ++F+ E L+ LQH+++VR FG C E ++++EYM + L+ FL
Sbjct: 50 LKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHG 109
Query: 58 ---------DPTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNM 108
+ G LG + + VA G++YL + L +HRDL N L+ +
Sbjct: 110 PDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGL 166
Query: 109 NPKISDFGIARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
KI DFG++R + R + +M PE L F+ +SDV+SFGV++ E +
Sbjct: 167 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
Query: 169 SKKNAHFY--NTDSL 181
K + NT+++
Sbjct: 227 YGKQPWYQLSNTEAI 241
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 91/159 (57%), Gaps = 12/159 (7%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCFLFDPTKTGLLGWE 68
E F E ++ KL+H LV+L+ E E I ++ EYM SL FL T L +
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQ 281
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
+ V + +A G+ Y+ R+ +HRDL+A+NIL+ N+ K++DFG+ARL +E
Sbjct: 282 L-VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-- 335
Query: 129 NTKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLE 165
T R + + +PE AL G F+IKSDV+SFG+L+ E
Sbjct: 336 -TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 373
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 94/168 (55%), Gaps = 11/168 (6%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E F E ++ KL+H LV+L+ E I + EYM SL FL T L ++
Sbjct: 48 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIXI-VTEYMSKGSLLDFLKGETGKYLRLPQL 106
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN 129
V + +A G+ Y+ R+ +HRDL+A+NIL+ N+ K++DFG+ARL +E
Sbjct: 107 -VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---X 159
Query: 130 TKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHF 175
T R + + +PE AL G F+IKSDV+SFG+L+ E L++K +
Sbjct: 160 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPY 206
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 17/195 (8%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLF--- 57
L S ++F+ E L+ LQH+++VR FG C E ++++EYM + L+ FL
Sbjct: 56 LKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHG 115
Query: 58 ---------DPTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNM 108
+ G LG + + VA G++YL + L +HRDL N L+ +
Sbjct: 116 PDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGL 172
Query: 109 NPKISDFGIARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
KI DFG++R + R + +M PE L F+ +SDV+SFGV++ E +
Sbjct: 173 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
Query: 169 SKKNAHFY--NTDSL 181
K + NT+++
Sbjct: 233 YGKQPWYQLSNTEAI 247
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 116/235 (49%), Gaps = 26/235 (11%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
+F +E ++ + H N++ L G + ++I EYM N SLD FL G
Sbjct: 76 DFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR--KNDGRFTVIQL 133
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNT 130
V +L G+ G+ YL S + +HRDL A NIL++SN+ K+SDFG++R+ D + T
Sbjct: 134 VGMLRGIGSGMKYL---SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT 190
Query: 131 KRIVG-TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAWN 189
R + +PE F+ SDV+S+G+++ E +S + + W+
Sbjct: 191 TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY-------------WD 237
Query: 190 LWNDGRAWELMDSILQNDASYPMLNRYI---NVALLCVQENAADRPTMLEVISML 241
+ N +++ +I + P ++ I + L C Q+ +DRP ++++ML
Sbjct: 238 MSNQ----DVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML 288
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 91/159 (57%), Gaps = 12/159 (7%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCFLFDPTKTGLLGWE 68
E F E ++ KL+H LV+L+ E E I ++ EYM SL FL T L +
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQ 281
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
+ V + +A G+ Y+ R+ +HRDL+A+NIL+ N+ K++DFG+ARL +E
Sbjct: 282 L-VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-- 335
Query: 129 NTKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLE 165
T R + + +PE AL G F+IKSDV+SFG+L+ E
Sbjct: 336 -TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 373
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 36/240 (15%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL--FDPTKTGLLGWE 68
+F E ++ + H N++RL G + +++ EYM N SLD FL D T +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---- 147
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
V +L G+A G+ YL S + +HRDL A NIL++SN+ K+SDFG++R+ D +
Sbjct: 148 QLVGMLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 129 NTKRIVG-TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHA 187
T R + SPE F+ SDV+S+G+++ E +S + +
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY------------- 251
Query: 188 WNLWNDGRAWELMDSILQNDASY----PM--LNRYINVALLCVQENAADRPTMLEVISML 241
W + N D I D Y PM + L C Q++ +RP +++S+L
Sbjct: 252 WEMSN-------QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 36/240 (15%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL--FDPTKTGLLGWE 68
+F E ++ + H N++RL G + +++ EYM N SLD FL D T +
Sbjct: 63 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---- 118
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGD-ELQ 127
V +L G+A G+ YL S + +HRDL A NIL++SN+ K+SDFG++R+ D E
Sbjct: 119 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 175
Query: 128 SNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHA 187
T+ + SPE F+ SDV+S+G+++ E +S + +
Sbjct: 176 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY------------- 222
Query: 188 WNLWNDGRAWELMDSILQNDASY----PM--LNRYINVALLCVQENAADRPTMLEVISML 241
W + N D I D Y PM + L C Q++ +RP +++S+L
Sbjct: 223 WEMSN-------QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 36/240 (15%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL--FDPTKTGLLGWE 68
+F E ++ + H N++RL G + +++ EYM N SLD FL D T +
Sbjct: 90 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---- 145
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
V +L G+A G+ YL S + +HRDL A NIL++SN+ K+SDFG++R+ D +
Sbjct: 146 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 202
Query: 129 NTKRIVG-TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHA 187
T R + SPE F+ SDV+S+G+++ E +S + +
Sbjct: 203 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY------------- 249
Query: 188 WNLWNDGRAWELMDSILQNDASY----PM--LNRYINVALLCVQENAADRPTMLEVISML 241
W + N D I D Y PM + L C Q++ +RP +++S+L
Sbjct: 250 WEMSN-------QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 302
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 36/240 (15%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL--FDPTKTGLLGWE 68
+F E ++ + H N++RL G + +++ EYM N SLD FL D T +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---- 147
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
V +L G+A G+ YL S + +HRDL A NIL++SN+ K+SDFG++R+ D +
Sbjct: 148 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 129 NTKRIVG-TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHA 187
T R + SPE F+ SDV+S+G+++ E +S + +
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY------------- 251
Query: 188 WNLWNDGRAWELMDSILQNDASY----PM--LNRYINVALLCVQENAADRPTMLEVISML 241
W + N D I D Y PM + L C Q++ +RP +++S+L
Sbjct: 252 WEMSN-------QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 36/240 (15%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL--FDPTKTGLLGWE 68
+F E ++ + H N++RL G + +++ EYM N SLD FL D T +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---- 147
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
V +L G+A G+ YL S + +HRDL A NIL++SN+ K+SDFG++R+ D +
Sbjct: 148 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 129 NTKRIVG-TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHA 187
T R + SPE F+ SDV+S+G+++ E +S + +
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY------------- 251
Query: 188 WNLWNDGRAWELMDSILQNDASY----PM--LNRYINVALLCVQENAADRPTMLEVISML 241
W + N D I D Y PM + L C Q++ +RP +++S+L
Sbjct: 252 WEMSN-------QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 36/240 (15%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL--FDPTKTGLLGWE 68
+F E ++ + H N++RL G + +++ EYM N SLD FL D T +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---- 147
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
V +L G+A G+ YL S + +HRDL A NIL++SN+ K+SDFG++R+ D +
Sbjct: 148 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 129 NTKRIVG-TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHA 187
T R + SPE F+ SDV+S+G+++ E +S + +
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY------------- 251
Query: 188 WNLWNDGRAWELMDSILQNDASY----PM--LNRYINVALLCVQENAADRPTMLEVISML 241
W + N D I D Y PM + L C Q++ +RP +++S+L
Sbjct: 252 WEMSN-------QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 96/173 (55%), Gaps = 21/173 (12%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIY-EYMPNKSLDCFLFDPTKTGLLGWE 68
E F E ++ KL+H LV+L+ E E I I EYM SL FL G +G
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVCEYMSKGSLLDFL-----KGEMGKY 110
Query: 69 MR----VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGD 124
+R V + +A G+ Y+ R+ +HRDL+A+NIL+ N+ K++DFG+ARL +
Sbjct: 111 LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 167
Query: 125 ELQSNTKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHF 175
E T R + + +PE AL G F+IKSDV+SFG+L+ E L++K +
Sbjct: 168 EY---TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPY 216
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 36/240 (15%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL--FDPTKTGLLGWE 68
+F E ++ + H N++RL G + +++ EYM N SLD FL D T +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---- 147
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
V +L G+A G+ YL S + +HRDL A NIL++SN+ K+SDFG++R+ D +
Sbjct: 148 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 129 NTKRIVG-TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHA 187
T R + SPE F+ SDV+S+G+++ E +S + +
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY------------- 251
Query: 188 WNLWNDGRAWELMDSILQNDASY----PM--LNRYINVALLCVQENAADRPTMLEVISML 241
W + N D I D Y PM + L C Q++ +RP +++S+L
Sbjct: 252 WEMSN-------QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 97/173 (56%), Gaps = 21/173 (12%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCFLFDPTKTGLLGWE 68
E F E ++ K++H LV+L+ E E I ++ EYM SL FL G +G
Sbjct: 58 EAFLQEAQVMKKIRHEKLVQLYAVVSE--EPIYIVTEYMSKGSLLDFL-----KGEMGKY 110
Query: 69 MR----VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGD 124
+R V + +A G+ Y+ R+ +HRDL+A+NIL+ N+ K++DFG+ARL +
Sbjct: 111 LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 167
Query: 125 ELQSNTKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHF 175
E T R + + +PE AL G F+IKSDV+SFG+L+ E L++K +
Sbjct: 168 EY---TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPY 216
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 36/240 (15%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL--FDPTKTGLLGWE 68
+F E ++ + H N++RL G + +++ EYM N SLD FL D T +
Sbjct: 80 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---- 135
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGD-ELQ 127
V +L G+A G+ YL S + +HRDL A NIL++SN+ K+SDFG++R+ D E
Sbjct: 136 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 192
Query: 128 SNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHA 187
T+ + SPE F+ SDV+S+G+++ E +S + +
Sbjct: 193 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY------------- 239
Query: 188 WNLWNDGRAWELMDSILQNDASY----PM--LNRYINVALLCVQENAADRPTMLEVISML 241
W + N D I D Y PM + L C Q++ +RP +++S+L
Sbjct: 240 WEMSN-------QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 292
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 90/159 (56%), Gaps = 12/159 (7%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIY-EYMPNKSLDCFLFDPTKTGLLGWE 68
E F E ++ KL+H LV+L+ E E I I EYM SL FL T L +
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVGEYMSKGSLLDFLKGETGKYLRLPQ 281
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
+ V + +A G+ Y+ R+ +HRDL+A+NIL+ N+ K++DFG+ARL +E
Sbjct: 282 L-VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-- 335
Query: 129 NTKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLE 165
T R + + +PE AL G F+IKSDV+SFG+L+ E
Sbjct: 336 -TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 373
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 113/240 (47%), Gaps = 36/240 (15%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL--FDPTKTGLLGWE 68
+F E ++ + H N++RL G + +++ EYM N SLD FL D T +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---- 147
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
V +L G+A G+ YL S + +HRDL A NIL++SN+ K+SDFG+ R+ D +
Sbjct: 148 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAA 204
Query: 129 NTKRIVG-TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHA 187
T R + SPE F+ SDV+S+G+++ E +S + +
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY------------- 251
Query: 188 WNLWNDGRAWELMDSILQNDASY----PM--LNRYINVALLCVQENAADRPTMLEVISML 241
W + N D I D Y PM + L C Q++ +RP +++S+L
Sbjct: 252 WEMSN-------QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 96/173 (55%), Gaps = 21/173 (12%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCFLFDPTKTGLLGWE 68
E F E ++ KL+H LV+L+ E E I ++ EYM SL FL G +G
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVTEYMSKGSLLDFL-----KGEMGKY 110
Query: 69 MR----VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGD 124
+R V + +A G+ Y+ R+ +HRDL A+NIL+ N+ K++DFG+ARL +
Sbjct: 111 LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDN 167
Query: 125 ELQSNTKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHF 175
E T R + + +PE AL G F+IKSDV+SFG+L+ E L++K +
Sbjct: 168 EY---TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPY 216
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 96/169 (56%), Gaps = 13/169 (7%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCFLFDPTKTGLLGWE 68
E F E ++ KL+H LV+L+ E E I ++ EYM SL FL T L +
Sbjct: 51 EAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQ 108
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
+ V + +A G+ Y+ R+ +HRDL+A+NIL+ N+ K++DFG+ARL +E
Sbjct: 109 L-VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-- 162
Query: 129 NTKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHF 175
T R + + +PE AL G F+IKSDV+SFG+L+ E L++K +
Sbjct: 163 -TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPY 209
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 17/195 (8%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL---- 56
L S ++F+ E L+ LQH+++VR FG C E ++++EYM + L+ FL
Sbjct: 79 LKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHG 138
Query: 57 --------FDPTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNM 108
+ G LG + + VA G++YL + L +HRDL N L+ +
Sbjct: 139 PDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGL 195
Query: 109 NPKISDFGIARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
KI DFG++R + R + +M PE L F+ +SDV+SFGV++ E +
Sbjct: 196 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
Query: 169 SKKNAHFY--NTDSL 181
K + NT+++
Sbjct: 256 YGKQPWYQLSNTEAI 270
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 116/235 (49%), Gaps = 26/235 (11%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
+F +E ++ + H N++ L G + ++I EYM N SLD FL G
Sbjct: 55 DFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR--KNDGRFTVIQL 112
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNT 130
V +L G+ G+ YL S + +HRDL A NIL++SN+ K+SDFG++R+ D + T
Sbjct: 113 VGMLRGIGSGMKYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT 169
Query: 131 KRIVG-TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAWN 189
R + +PE F+ SDV+S+G+++ E +S + + W+
Sbjct: 170 TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY-------------WD 216
Query: 190 LWNDGRAWELMDSILQNDASYPMLNRYI---NVALLCVQENAADRPTMLEVISML 241
+ N +++ +I + P ++ I + L C Q+ +DRP ++++ML
Sbjct: 217 MSNQ----DVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML 267
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 116/235 (49%), Gaps = 26/235 (11%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
+F +E ++ + H N++ L G + ++I EYM N SLD FL G
Sbjct: 61 DFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR--KNDGRFTVIQL 118
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNT 130
V +L G+ G+ YL S + +HRDL A NIL++SN+ K+SDFG++R+ D + T
Sbjct: 119 VGMLRGIGSGMKYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT 175
Query: 131 KRIVG-TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAWN 189
R + +PE F+ SDV+S+G+++ E +S + + W+
Sbjct: 176 TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY-------------WD 222
Query: 190 LWNDGRAWELMDSILQNDASYPMLNRYI---NVALLCVQENAADRPTMLEVISML 241
+ N +++ +I + P ++ I + L C Q+ +DRP ++++ML
Sbjct: 223 MSNQ----DVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML 273
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 91/163 (55%), Gaps = 20/163 (12%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCFLFDPTKTGLLGWE 68
E F E ++ KL+H LV+L+ E E I ++ EYM SL FL G +G
Sbjct: 225 EAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVTEYMSKGSLLDFL-----KGEMGKY 277
Query: 69 MR----VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGD 124
+R V + +A G+ Y+ R+ +HRDL+A+NIL+ N+ K++DFG+ RL +
Sbjct: 278 LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDN 334
Query: 125 ELQSNTKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLE 165
E T R + + +PE AL G F+IKSDV+SFG+L+ E
Sbjct: 335 EY---TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 374
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 96/169 (56%), Gaps = 13/169 (7%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCFLFDPTKTGLLGWE 68
E F E ++ KL+H LV+L+ E E I ++ EYM SL FL T L +
Sbjct: 55 EAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQ 112
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
+ V + +A G+ Y+ R+ +HRDL+A+NIL+ N+ K++DFG+ARL +E
Sbjct: 113 L-VDMSAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEW-- 166
Query: 129 NTKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHF 175
T R + + +PE AL G F+IKSDV+SFG+L+ E L++K +
Sbjct: 167 -TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPY 213
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 96/169 (56%), Gaps = 13/169 (7%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCFLFDPTKTGLLGWE 68
E F E ++ KL+H LV+L+ E E I ++ EYM SL FL T L +
Sbjct: 55 EAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQ 112
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
+ V + +A G+ Y+ R+ +HRDL+A+NIL+ N+ K++DFG+ARL +E
Sbjct: 113 L-VDMSAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-- 166
Query: 129 NTKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHF 175
T R + + +PE AL G F+IKSDV+SFG+L+ E L++K +
Sbjct: 167 -TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPY 213
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 19/172 (11%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E F E ++ KL+H LV+L+ E I++ EYM L FL G +G +
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVM-EYMSKGCLLDFL-----KGEMGKYL 111
Query: 70 R----VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDE 125
R V + +A G+ Y+ R+ +HRDL+A+NIL+ N+ K++DFG+ARL +E
Sbjct: 112 RLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
Query: 126 LQSNTKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHF 175
T R + + +PE AL G F+IKSDV+SFG+L+ E L++K +
Sbjct: 169 Y---TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPY 216
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 114/239 (47%), Gaps = 27/239 (11%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
++ F E L+ LQH LVRL+ +I EYM SL FL + G +
Sbjct: 52 VQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFL-KSDEGGKVLLP 110
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
+ +A+G+ Y+ R IHRDL+A+N+L+ ++ KI+DFG+AR+ +E
Sbjct: 111 KLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY-- 165
Query: 129 NTKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAH--FYNTDSLTLL 184
T R + + +PE G F+IKSDV+SFG+L+ E ++ K + N D +T L
Sbjct: 166 -TAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTAL 224
Query: 185 GHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISMLTN 243
+ + R D + ++ +C +E A +RPT + S+L +
Sbjct: 225 SQGYRM---PRVENCPDELY-------------DIMKMCWKEKAEERPTFDYLQSVLDD 267
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 96/173 (55%), Gaps = 21/173 (12%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCFLFDPTKTGLLGWE 68
E F E ++ KL+H LV+L+ E E I ++ EYM L FL G +G
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVTEYMSKGCLLDFL-----KGEMGKY 110
Query: 69 MR----VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGD 124
+R V + +A G+ Y+ R+ +HRDL+A+NIL+ N+ K++DFG+ARL +
Sbjct: 111 LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 167
Query: 125 ELQSNTKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHF 175
E T R + + +PE AL G F+IKSDV+SFG+L+ E L++K +
Sbjct: 168 EY---TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPY 216
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 124/255 (48%), Gaps = 26/255 (10%)
Query: 3 SQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCFLFDPTK 61
Q + F E L+ +LQH+ LVRL+ + E I +I EYM N SL FL P+
Sbjct: 55 KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ--EPIYIITEYMENGSLVDFLKTPSG 112
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
L ++ + + +A+G+ ++ + IHRDL+A+NIL+ ++ KI+DFG+ARL
Sbjct: 113 IKLTINKL-LDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLI 168
Query: 122 GGDELQSNTKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTD 179
+E T R + + +PE G F+IKSDV+SFG+L+ E ++ + + T+
Sbjct: 169 EDNE---XTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 225
Query: 180 SLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVIS 239
+ N R + ++ + Y ++ LC +E DRPT + S
Sbjct: 226 PEVIQ-------NLERGYRMVRPDNCPEELYQLMR-------LCWKERPEDRPTFDYLRS 271
Query: 240 MLTNENVILPSPLQP 254
+L + QP
Sbjct: 272 VLEDFFTATEGQFQP 286
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 120/243 (49%), Gaps = 24/243 (9%)
Query: 3 SQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKT 62
Q + F E L+ +LQH+ LVRL+ + I I EYM N SL FL P+
Sbjct: 48 KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYI-ITEYMENGSLVDFLKTPSGI 106
Query: 63 GLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG 122
L ++ + + +A+G+ ++ + IHRDL+A+NIL+ ++ KI+DFG+ARL
Sbjct: 107 KLTINKL-LDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIE 162
Query: 123 GDELQSNTKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDS 180
+E T R + + +PE G F+IKSDV+SFG+L+ E ++ + + T+
Sbjct: 163 DNE---XTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP 219
Query: 181 LTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISM 240
+ N R + ++ + Y ++ LC +E DRPT + S+
Sbjct: 220 EVIQ-------NLERGYRMVRPDNCPEELYQLMR-------LCWKERPEDRPTFDYLRSV 265
Query: 241 LTN 243
L +
Sbjct: 266 LED 268
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 93/168 (55%), Gaps = 10/168 (5%)
Query: 3 SQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKT 62
Q + F E L+ +LQH+ LVRL+ + I I EYM N SL FL P+
Sbjct: 47 KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYI-ITEYMENGSLVDFLKTPSGI 105
Query: 63 GLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG 122
L ++ + + +A+G+ ++ + IHRDL+A+NIL+ ++ KI+DFG+ARL
Sbjct: 106 KLTINKL-LDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIE 161
Query: 123 GDELQSNTKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+E T R + + +PE G F+IKSDV+SFG+L+ E ++
Sbjct: 162 DNE---XTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 206
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 122/244 (50%), Gaps = 26/244 (10%)
Query: 3 SQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCFLFDPTK 61
Q + F E L+ +LQH+ LVRL+ + E I +I EYM N SL FL P+
Sbjct: 52 KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ--EPIYIITEYMENGSLVDFLKTPSG 109
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
L ++ + + +A+G+ ++ + IHRDL+A+NIL+ ++ KI+DFG+ARL
Sbjct: 110 IKLTINKL-LDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLI 165
Query: 122 GGDELQSNTKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTD 179
+E T R + + +PE G F+IKSDV+SFG+L+ E ++ + + T+
Sbjct: 166 EDNE---XTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 222
Query: 180 SLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVIS 239
+ N R + ++ + Y ++ LC +E DRPT + S
Sbjct: 223 PEVIQ-------NLERGYRMVRPDNCPEELYQLMR-------LCWKERPEDRPTFDYLRS 268
Query: 240 MLTN 243
+L +
Sbjct: 269 VLED 272
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 120/243 (49%), Gaps = 24/243 (9%)
Query: 3 SQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKT 62
Q + F E L+ +LQH+ LVRL+ + I I EYM N SL FL P+
Sbjct: 51 KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYI-ITEYMENGSLVDFLKTPSGI 109
Query: 63 GLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG 122
L ++ + + +A+G+ ++ + IHRDL+A+NIL+ ++ KI+DFG+ARL
Sbjct: 110 KLTINKL-LDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIE 165
Query: 123 GDELQSNTKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDS 180
+E T R + + +PE G F+IKSDV+SFG+L+ E ++ + + T+
Sbjct: 166 DNEY---TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP 222
Query: 181 LTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISM 240
+ N R + ++ + Y ++ LC +E DRPT + S+
Sbjct: 223 EVIQ-------NLERGYRMVRPDNCPEELYQLMR-------LCWKERPEDRPTFDYLRSV 268
Query: 241 LTN 243
L +
Sbjct: 269 LED 271
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 122/244 (50%), Gaps = 26/244 (10%)
Query: 3 SQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCFLFDPTK 61
Q + F E L+ +LQH+ LVRL+ + E I +I EYM N SL FL P+
Sbjct: 54 KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ--EPIYIITEYMENGSLVDFLKTPSG 111
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
L ++ + + +A+G+ ++ + IHRDL+A+NIL+ ++ KI+DFG+ARL
Sbjct: 112 IKLTINKL-LDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLI 167
Query: 122 GGDELQSNTKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTD 179
+E T R + + +PE G F+IKSDV+SFG+L+ E ++ + + T+
Sbjct: 168 EDNE---XTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 224
Query: 180 SLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVIS 239
+ N R + ++ + Y ++ LC +E DRPT + S
Sbjct: 225 PEVIQ-------NLERGYRMVRPDNCPEELYQLMR-------LCWKERPEDRPTFDYLRS 270
Query: 240 MLTN 243
+L +
Sbjct: 271 VLED 274
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 122/244 (50%), Gaps = 26/244 (10%)
Query: 3 SQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCFLFDPTK 61
Q + F E L+ +LQH+ LVRL+ + E I +I EYM N SL FL P+
Sbjct: 46 KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ--EPIYIITEYMENGSLVDFLKTPSG 103
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
L ++ + + +A+G+ ++ + IHRDL+A+NIL+ ++ KI+DFG+ARL
Sbjct: 104 IKLTINKL-LDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLI 159
Query: 122 GGDELQSNTKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTD 179
+E T R + + +PE G F+IKSDV+SFG+L+ E ++ + + T+
Sbjct: 160 EDNE---XTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 216
Query: 180 SLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVIS 239
+ N R + ++ + Y ++ LC +E DRPT + S
Sbjct: 217 PEVIQ-------NLERGYRMVRPDNCPEELYQLMR-------LCWKERPEDRPTFDYLRS 262
Query: 240 MLTN 243
+L +
Sbjct: 263 VLED 266
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 93/168 (55%), Gaps = 10/168 (5%)
Query: 3 SQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKT 62
Q + F E L+ +LQH+ LVRL+ + I I EYM N SL FL P+
Sbjct: 52 KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYI-ITEYMENGSLVDFLKTPSGI 110
Query: 63 GLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG 122
L ++ + + +A+G+ ++ + IHRDL+A+NIL+ ++ KI+DFG+ARL
Sbjct: 111 KLTINKL-LDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIE 166
Query: 123 GDELQSNTKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+E T R + + +PE G F+IKSDV+SFG+L+ E ++
Sbjct: 167 DNEY---TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 120/243 (49%), Gaps = 24/243 (9%)
Query: 3 SQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKT 62
Q + F E L+ +LQH+ LVRL+ + I I EYM N SL FL P+
Sbjct: 46 KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYI-ITEYMENGSLVDFLKTPSGI 104
Query: 63 GLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG 122
L ++ + + +A+G+ ++ + IHRDL+A+NIL+ ++ KI+DFG+ARL
Sbjct: 105 KLTINKL-LDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIE 160
Query: 123 GDELQSNTKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDS 180
+E T R + + +PE G F+IKSDV+SFG+L+ E ++ + + T+
Sbjct: 161 DNEY---TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP 217
Query: 181 LTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISM 240
+ N R + ++ + Y ++ LC +E DRPT + S+
Sbjct: 218 EVIQ-------NLERGYRMVRPDNCPEELYQLMR-------LCWKERPEDRPTFDYLRSV 263
Query: 241 LTN 243
L +
Sbjct: 264 LED 266
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 93/168 (55%), Gaps = 10/168 (5%)
Query: 3 SQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKT 62
Q + F E L+ +LQH+ LVRL+ + I I EYM N SL FL P+
Sbjct: 46 KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYI-ITEYMENGSLVDFLKTPSGI 104
Query: 63 GLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG 122
L ++ + + +A+G+ ++ + IHRDL+A+NIL+ ++ KI+DFG+ARL
Sbjct: 105 KLTINKL-LDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIE 160
Query: 123 GDELQSNTKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+E T R + + +PE G F+IKSDV+SFG+L+ E ++
Sbjct: 161 DNE---XTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 122/244 (50%), Gaps = 26/244 (10%)
Query: 3 SQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCFLFDPTK 61
Q + F E L+ +LQH+ LVRL+ + E I +I EYM N SL FL P+
Sbjct: 56 KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ--EPIYIITEYMENGSLVDFLKTPSG 113
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
L ++ + + +A+G+ ++ + IHRDL+A+NIL+ ++ KI+DFG+ARL
Sbjct: 114 IKLTINKL-LDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLI 169
Query: 122 GGDELQSNTKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTD 179
+E T R + + +PE G F+IKSDV+SFG+L+ E ++ + + T+
Sbjct: 170 EDNEY---TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 226
Query: 180 SLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVIS 239
+ N R + ++ + Y ++ LC +E DRPT + S
Sbjct: 227 PEVIQ-------NLERGYRMVRPDNCPEELYQLMR-------LCWKERPEDRPTFDYLRS 272
Query: 240 MLTN 243
+L +
Sbjct: 273 VLED 276
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 93/168 (55%), Gaps = 10/168 (5%)
Query: 3 SQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKT 62
Q + F E L+ +LQH+ LVRL+ + I I EYM N SL FL P+
Sbjct: 41 KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYI-ITEYMENGSLVDFLKTPSGI 99
Query: 63 GLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG 122
L ++ + + +A+G+ ++ + IHRDL+A+NIL+ ++ KI+DFG+ARL
Sbjct: 100 KLTINKL-LDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIE 155
Query: 123 GDELQSNTKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+E T R + + +PE G F+IKSDV+SFG+L+ E ++
Sbjct: 156 DNEY---TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 200
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 93/165 (56%), Gaps = 12/165 (7%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCFLFDPTKTGLLGWE 68
E F E ++ KL+H LV+L+ E E I ++ EYM SL FL D L
Sbjct: 49 ESFLEEAQIMKKLKHDKLVQLYAVVSE--EPIYIVTEYMNKGSLLDFLKDGEGRALKLPN 106
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
+ V + VA G+ Y+ R+ IHRDL+++NIL+ + + KI+DFG+ARL +E
Sbjct: 107 L-VDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNE--- 159
Query: 129 NTKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKK 171
T R + + +PE AL G F+IKSDV+SFG+L+ E ++ +
Sbjct: 160 XTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGR 204
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 113/240 (47%), Gaps = 36/240 (15%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL--FDPTKTGLLGWE 68
+F E ++ + H N++RL G + +++ E M N SLD FL D T +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI---- 147
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
V +L G+A G+ YL S + +HRDL A NIL++SN+ K+SDFG++R+ D +
Sbjct: 148 QLVGMLRGIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 129 NTKRIVG-TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHA 187
T R + SPE F+ SDV+S+G+++ E +S + +
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY------------- 251
Query: 188 WNLWNDGRAWELMDSILQNDASY----PM--LNRYINVALLCVQENAADRPTMLEVISML 241
W + N D I D Y PM + L C Q++ +RP +++S+L
Sbjct: 252 WEMSN-------QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 121/244 (49%), Gaps = 26/244 (10%)
Query: 3 SQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCFLFDPTK 61
Q + F E L+ +LQH+ LVRL+ + E I +I EYM N SL FL P+
Sbjct: 46 KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ--EPIYIITEYMENGSLVDFLKTPSG 103
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
L ++ + + +A+G+ ++ + IHRDL+A+NIL+ ++ KI+DFG+ARL
Sbjct: 104 IKLTINKL-LDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLI 159
Query: 122 GGDELQSNTKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTD 179
E T R + + +PE G F+IKSDV+SFG+L+ E ++ + + T+
Sbjct: 160 ---EDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 216
Query: 180 SLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVIS 239
+ N R + ++ + Y ++ LC +E DRPT + S
Sbjct: 217 PEVIQ-------NLERGYRMVRPDNCPEELYQLMR-------LCWKERPEDRPTFDYLRS 262
Query: 240 MLTN 243
+L +
Sbjct: 263 VLED 266
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 113/240 (47%), Gaps = 36/240 (15%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL--FDPTKTGLLGWE 68
+F E ++ + H N++RL G + +++ E M N SLD FL D T +
Sbjct: 63 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI---- 118
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
V +L G+A G+ YL S + +HRDL A NIL++SN+ K+SDFG++R+ D +
Sbjct: 119 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 175
Query: 129 NTKRIVGT-YGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHA 187
T R + SPE F+ SDV+S+G+++ E +S + +
Sbjct: 176 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY------------- 222
Query: 188 WNLWNDGRAWELMDSILQNDASY----PM--LNRYINVALLCVQENAADRPTMLEVISML 241
W + N D I D Y PM + L C Q++ +RP +++S+L
Sbjct: 223 WEMSN-------QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 113/240 (47%), Gaps = 36/240 (15%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL--FDPTKTGLLGWE 68
+F E ++ + H N++RL G + +++ E M N SLD FL D T +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI---- 147
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
V +L G+A G+ YL S + +HRDL A NIL++SN+ K+SDFG++R+ D +
Sbjct: 148 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 129 NTKRIVG-TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHA 187
T R + SPE F+ SDV+S+G+++ E +S + +
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY------------- 251
Query: 188 WNLWNDGRAWELMDSILQNDASY----PM--LNRYINVALLCVQENAADRPTMLEVISML 241
W + N D I D Y PM + L C Q++ +RP +++S+L
Sbjct: 252 WEMSN-------QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 113/234 (48%), Gaps = 24/234 (10%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
+F E ++ + H N++ L G + +++ EYM N SLD FL G
Sbjct: 69 DFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFL--KKNDGQFTVIQL 126
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNT 130
V +L G++ G+ YL S + +HRDL A NIL++SN+ K+SDFG++R+ D + T
Sbjct: 127 VGMLRGISAGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 183
Query: 131 KRIVG-TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHF--YNTDSLTLLGHA 187
R + +PE F+ SDV+S+G+++ E +S + ++ N D + +
Sbjct: 184 TRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEG 243
Query: 188 WNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISML 241
+ L + MD A Y ++ L C Q+ RP E+++ML
Sbjct: 244 YRLPSP------MDC---PAALYQLM-------LDCWQKERNSRPKFDEIVNML 281
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 84/160 (52%), Gaps = 3/160 (1%)
Query: 6 GQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLL 65
+ + EF E+ ++ +L+H N+V G + ++ EY+ SL L L
Sbjct: 75 AERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQL 134
Query: 66 GWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDE 125
R+ + VA+G+ YLH+ + ++HRDLK+ N+L+D K+ DFG++RL
Sbjct: 135 DERRRLSMAYDVAKGMNYLHNRNP-PIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXF 193
Query: 126 LQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
L S K GT +M+PE + KSDV+SFGV++ E
Sbjct: 194 LXS--KXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWE 231
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 92/183 (50%), Gaps = 24/183 (13%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLF------------ 57
++F+ E L+ LQH ++V+ +G C + I+++EYM + L+ FL
Sbjct: 62 KDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDG 121
Query: 58 DPTKT-GLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFG 116
P + G LG + I +A G++YL + +HRDL N L+ +N+ KI DFG
Sbjct: 122 QPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFG 178
Query: 117 IARLFGGDELQSNTKRIVG----TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKN 172
++R D ++ R+ G +M PE + F+ +SDV+SFGV++ E + K
Sbjct: 179 MSR----DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQ 234
Query: 173 AHF 175
F
Sbjct: 235 PWF 237
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 122/244 (50%), Gaps = 26/244 (10%)
Query: 3 SQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCFLFDPTK 61
Q + F E L+ +LQH+ LVRL+ + E I +I EYM N SL FL P+
Sbjct: 42 KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ--EPIYIITEYMENGSLVDFLKTPSG 99
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
L ++ + + +A+G+ ++ + IHR+L+A+NIL+ ++ KI+DFG+ARL
Sbjct: 100 IKLTINKL-LDMAAQIAEGMAFIEERN---YIHRNLRAANILVSDTLSCKIADFGLARLI 155
Query: 122 GGDELQSNTKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTD 179
+E T R + + +PE G F+IKSDV+SFG+L+ E ++ + + T+
Sbjct: 156 EDNEY---TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 212
Query: 180 SLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVIS 239
+ N R + ++ + Y ++ LC +E DRPT + S
Sbjct: 213 PEVIQ-------NLERGYRMVRPDNCPEELYQLMR-------LCWKERPEDRPTFDYLRS 258
Query: 240 MLTN 243
+L +
Sbjct: 259 VLED 262
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 90/158 (56%), Gaps = 6/158 (3%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
EF +E +++A + H +LVRL G C+ + L+ + MP+ L ++ + +G ++
Sbjct: 63 EFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDN--IGSQLL 119
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNT 130
+ +A+G++YL R++HRDL A N+L+ S + KI+DFG+ARL GDE + N
Sbjct: 120 LNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA 176
Query: 131 KRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+M+ E F+ +SDV+S+GV + E ++
Sbjct: 177 DGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 90/158 (56%), Gaps = 6/158 (3%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
EF +E +++A + H +LVRL G C+ + L+ + MP+ L ++ + +G ++
Sbjct: 86 EFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDN--IGSQLL 142
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNT 130
+ +A+G++YL R++HRDL A N+L+ S + KI+DFG+ARL GDE + N
Sbjct: 143 LNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA 199
Query: 131 KRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+M+ E F+ +SDV+S+GV + E ++
Sbjct: 200 DGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 84/160 (52%), Gaps = 3/160 (1%)
Query: 6 GQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLL 65
+ + EF E+ ++ +L+H N+V G + ++ EY+ SL L L
Sbjct: 75 AERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQL 134
Query: 66 GWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDE 125
R+ + VA+G+ YLH+ + ++HR+LK+ N+L+D K+ DFG++RL
Sbjct: 135 DERRRLSMAYDVAKGMNYLHNRNP-PIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF 193
Query: 126 LQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
L S K GT +M+PE + KSDV+SFGV++ E
Sbjct: 194 LSS--KSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWE 231
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 114/237 (48%), Gaps = 28/237 (11%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
+F +E ++ + H N++ L G + ++I E+M N SLD FL G
Sbjct: 80 DFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ--NDGQFTVIQL 137
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNT 130
V +L G+A G+ YL + + +HRDL A NIL++SN+ K+SDFG++R D
Sbjct: 138 VGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY 194
Query: 131 KRIVG---TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHA 187
+G + +PE F+ SDV+S+G+++ E +S + +
Sbjct: 195 TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPY------------- 241
Query: 188 WNLWNDGRAWELMDSILQNDASYPMLN---RYINVALLCVQENAADRPTMLEVISML 241
W++ N +++++I Q+ P ++ + L C Q++ RP ++++ L
Sbjct: 242 WDMTNQ----DVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL 294
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 91/189 (48%), Gaps = 21/189 (11%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT 60
L S ++F E L+ LQH ++V+ +G C+E I+++EYM + L+ FL
Sbjct: 51 LKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHG 110
Query: 61 KTGLLGWE----------MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP 110
+L E + I + +A G++YL + +HRDL N L+ N+
Sbjct: 111 PDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLV 167
Query: 111 KISDFGIARLFGGDELQSNTKRIVG----TYGYMSPEYALRGLFSIKSDVFSFGVLVLET 166
KI DFG++R D ++ R+ G +M PE + F+ +SDV+S GV++ E
Sbjct: 168 KIGDFGMSR----DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEI 223
Query: 167 LSSKKNAHF 175
+ K +
Sbjct: 224 FTYGKQPWY 232
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 115/239 (48%), Gaps = 27/239 (11%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
++ F E L+ LQH LVRL+ + +I E+M SL FL + G +
Sbjct: 51 VQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFL-KSDEGGKVLLP 109
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
+ +A+G+ Y+ R IHRDL+A+N+L+ ++ KI+DFG+AR+ +E
Sbjct: 110 KLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY-- 164
Query: 129 NTKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAH--FYNTDSLTLL 184
T R + + +PE G F+IKS+V+SFG+L+ E ++ K + N D ++ L
Sbjct: 165 -TAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSAL 223
Query: 185 GHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISMLTN 243
+ + R D + ++ +C +E A +RPT + S+L +
Sbjct: 224 SQGYRM---PRMENCPDELY-------------DIMKMCWKEKAEERPTFDYLQSVLDD 266
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 107/229 (46%), Gaps = 19/229 (8%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
+EEF E ++ +++H NLV+L G C ++ EYMP +L +L + + +
Sbjct: 72 VEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTA-- 129
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
V +L Q + + + IHRDL A N L+ N K++DFG++RL GD +
Sbjct: 130 --VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTA 187
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAW 188
+ + +PE FSIKSDV++FGVL+ E +++ + + D L +
Sbjct: 188 HAGAKFPI-KWTAPESLAYNTFSIKSDVWAFGVLLWE-IATYGMSPYPGID----LSQVY 241
Query: 189 NLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEV 237
+L G E Q + P + + C + + ADRP+ E
Sbjct: 242 DLLEKGYRME------QPEGCPPKVYELMRA---CWKWSPADRPSFAET 281
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 121/244 (49%), Gaps = 28/244 (11%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKS-LDCFLF----DPTKTG 63
++E E+ +++ H N+V + + E L+ + + S LD K+G
Sbjct: 52 MDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSG 111
Query: 64 LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF-- 121
+L IL V +GL YLH + IHRD+KA NILL + + +I+DFG++
Sbjct: 112 VLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLAT 168
Query: 122 GGDELQSNTKR-IVGTYGYMSPEY--ALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNT 178
GGD ++ ++ VGT +M+PE +RG + K+D++SFG+ +E + H Y
Sbjct: 169 GGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDFKADIWSFGITAIELATGAAPYHKYPP 227
Query: 179 DSLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRY----INVALLCVQENAADRPTM 234
+ +L L ND + +++ +Q+ ML +Y + LC+Q++ RPT
Sbjct: 228 MKVLML----TLQNDPPS---LETGVQDKE---MLKKYGKSFRKMISLCLQKDPEKRPTA 277
Query: 235 LEVI 238
E++
Sbjct: 278 AELL 281
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 121/244 (49%), Gaps = 28/244 (11%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKS-LDCFLF----DPTKTG 63
++E E+ +++ H N+V + + E L+ + + S LD K+G
Sbjct: 57 MDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSG 116
Query: 64 LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF-- 121
+L IL V +GL YLH + IHRD+KA NILL + + +I+DFG++
Sbjct: 117 VLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLAT 173
Query: 122 GGDELQSNTKR-IVGTYGYMSPEY--ALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNT 178
GGD ++ ++ VGT +M+PE +RG + K+D++SFG+ +E + H Y
Sbjct: 174 GGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDFKADIWSFGITAIELATGAAPYHKYPP 232
Query: 179 DSLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRY----INVALLCVQENAADRPTM 234
+ +L L ND + +++ +Q+ ML +Y + LC+Q++ RPT
Sbjct: 233 MKVLML----TLQNDPPS---LETGVQDKE---MLKKYGKSFRKMISLCLQKDPEKRPTA 282
Query: 235 LEVI 238
E++
Sbjct: 283 AELL 286
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 115/239 (48%), Gaps = 32/239 (13%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
EF +E ++ + +H N++RL G +++ E+M N +LD FL G
Sbjct: 63 EFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLR--LNDGQFTVIQL 120
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNT 130
V +L G+A G+ YL S +HRDL A NIL++SN+ K+SDFG++R +E S+
Sbjct: 121 VGMLRGIASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFL--EENSSDP 175
Query: 131 KRIVGTYG-----YMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLG 185
G + +PE F+ SD +S+G+++ E +S + +
Sbjct: 176 TETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPY----------- 224
Query: 186 HAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALL---CVQENAADRPTMLEVISML 241
W++ N +++++I Q+ P + ++ L C Q++ RP +V+S L
Sbjct: 225 --WDMSNQ----DVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSAL 277
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 115/240 (47%), Gaps = 34/240 (14%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
EF +E ++ + +H N++RL G +++ E+M N +LD FL G
Sbjct: 61 EFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLR--LNDGQFTVIQL 118
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNT 130
V +L G+A G+ YL S +HRDL A NIL++SN+ K+SDFG++R E S+
Sbjct: 119 VGMLRGIASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFL---EENSSD 172
Query: 131 KRIVGTYG------YMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLL 184
+ G + +PE F+ SD +S+G+++ E +S + +
Sbjct: 173 PTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPY---------- 222
Query: 185 GHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALL---CVQENAADRPTMLEVISML 241
W++ N +++++I Q+ P + ++ L C Q++ RP +V+S L
Sbjct: 223 ---WDMSNQ----DVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSAL 275
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 113/237 (47%), Gaps = 28/237 (11%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
+F +E ++ + H N++ L G + ++I E+M N SLD FL G
Sbjct: 54 DFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ--NDGQFTVIQL 111
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNT 130
V +L G+A G+ YL + + +HR L A NIL++SN+ K+SDFG++R D
Sbjct: 112 VGMLRGIAAGMKYL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY 168
Query: 131 KRIVG---TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHA 187
+G + +PE F+ SDV+S+G+++ E +S + +
Sbjct: 169 TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPY------------- 215
Query: 188 WNLWNDGRAWELMDSILQNDASYPMLN---RYINVALLCVQENAADRPTMLEVISML 241
W++ N +++++I Q+ P ++ + L C Q++ RP ++++ L
Sbjct: 216 WDMTNQ----DVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL 268
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 19/229 (8%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
+EEF E ++ +++H NLV+L G C +I E+M +L +L + + +
Sbjct: 51 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-- 108
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
V +L Q + + + IHRDL A N L+ N K++DFG++RL GD +
Sbjct: 109 --VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTA 166
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAW 188
+ + +PE FSIKSDV++FGVL+ E +++ + + D
Sbjct: 167 HAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGIDP-------- 216
Query: 189 NLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEV 237
+ +EL++ + + + + C Q N +DRP+ E+
Sbjct: 217 -----SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 19/229 (8%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
+EEF E ++ +++H NLV+L G C +I E+M +L +L + + +
Sbjct: 51 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSA-- 108
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
V +L Q + + + IHRDL A N L+ N K++DFG++RL GD +
Sbjct: 109 --VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTA 166
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAW 188
+ + +PE FSIKSDV++FGVL+ E +++ + + D
Sbjct: 167 HAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGIDP-------- 216
Query: 189 NLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEV 237
+ +EL++ + + + + C Q N +DRP+ E+
Sbjct: 217 -----SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 113/239 (47%), Gaps = 34/239 (14%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
+F E ++ + H N+V L G +++ E+M N +LD FL G
Sbjct: 90 DFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFL--RKHDGQFTVIQL 147
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNT 130
V +L G+A G+ YL + + +HRDL A NIL++SN+ K+SDFG++R+ ++ +
Sbjct: 148 VGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRV-----IEDDP 199
Query: 131 KRIVGTYG------YMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHF--YNTDSLT 182
+ + T G + +PE F+ SDV+S+G+++ E +S + ++ N D +
Sbjct: 200 EAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIK 259
Query: 183 LLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISML 241
+ + L + + A L L C Q+ A+RP +++ +L
Sbjct: 260 AIEEGYRL----------PAPMDCPAGLHQL------MLDCWQKERAERPKFEQIVGIL 302
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 88/175 (50%), Gaps = 22/175 (12%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLF------------ 57
EEF++E ML A+LQH N+V L G + +I+ Y + L FL
Sbjct: 74 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTD 133
Query: 58 -DPTKTGLLGWEMRVRILEGVAQGLLYL--HHYSRLRVIHRDLKASNILLDSNMNPKISD 114
D T L V ++ +A G+ YL HH V+H+DL N+L+ +N KISD
Sbjct: 134 DDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISD 188
Query: 115 FGIAR-LFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
G+ R ++ D + ++ +M+PE + G FSI SD++S+GV++ E S
Sbjct: 189 LGLFREVYAADYYKLLGNSLLPIR-WMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 83/164 (50%), Gaps = 7/164 (4%)
Query: 4 QSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTG 63
+ + L+ F+ E+ ++L H+N+V + E L+ EY+ +L ++ G
Sbjct: 50 EKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI---ESHG 106
Query: 64 LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGG 123
L + + + G+ + H +R++HRD+K NIL+DSN KI DFGIA+
Sbjct: 107 PLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE 163
Query: 124 DELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETL 167
L + T ++GT Y SPE A +D++S G+++ E L
Sbjct: 164 TSL-TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEML 206
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 88/175 (50%), Gaps = 22/175 (12%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLF------------ 57
EEF++E ML A+LQH N+V L G + +I+ Y + L FL
Sbjct: 57 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTD 116
Query: 58 -DPTKTGLLGWEMRVRILEGVAQGLLYL--HHYSRLRVIHRDLKASNILLDSNMNPKISD 114
D T L V ++ +A G+ YL HH V+H+DL N+L+ +N KISD
Sbjct: 117 DDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISD 171
Query: 115 FGIAR-LFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
G+ R ++ D + ++ +M+PE + G FSI SD++S+GV++ E S
Sbjct: 172 LGLFREVYAADYYKLLGNSLLPIR-WMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 19/229 (8%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
+EEF E ++ +++H NLV+L G C +I E+M +L +L + + +
Sbjct: 51 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-- 108
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
V +L Q + + + IHRDL A N L+ N K++DFG++RL GD +
Sbjct: 109 --VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTA 166
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAW 188
+ + +PE FSIKSDV++FGVL+ E +++ + + D
Sbjct: 167 HAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGIDP-------- 216
Query: 189 NLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEV 237
+ +EL++ + + + + C Q N +DRP+ E+
Sbjct: 217 -----SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 112/237 (47%), Gaps = 14/237 (5%)
Query: 12 FKNEMMLIAKLQHRNLVRLFGCCIEHGEKIL--IYEYMPNKSLDCFLFDPTKTGLLGWEM 69
+K E+ ++ L H ++++ GCC + GEK L + EY+P SL +L P + +G
Sbjct: 63 WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL--PRHS--IGLAQ 118
Query: 70 RVRILEGVAQGLLYLH--HYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG-GDEL 126
+ + + +G+ YLH HY IHR+L A N+LLD++ KI DFG+A+ G E
Sbjct: 119 LLLFAQQICEGMAYLHAQHY-----IHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY 173
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGH 186
+ + +PE F SDV+SFGV + E L+ ++ T L L+G
Sbjct: 174 YRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGI 233
Query: 187 AWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISMLTN 243
A R EL++ + ++ C + A+ RPT +I +L
Sbjct: 234 AQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKT 290
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 112/237 (47%), Gaps = 14/237 (5%)
Query: 12 FKNEMMLIAKLQHRNLVRLFGCCIEHGEKIL--IYEYMPNKSLDCFLFDPTKTGLLGWEM 69
+K E+ ++ L H ++++ GCC + GEK L + EY+P SL +L P + +G
Sbjct: 63 WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL--PRHS--IGLAQ 118
Query: 70 RVRILEGVAQGLLYLH--HYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG-GDEL 126
+ + + +G+ YLH HY IHR+L A N+LLD++ KI DFG+A+ G E
Sbjct: 119 LLLFAQQICEGMAYLHSQHY-----IHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY 173
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGH 186
+ + +PE F SDV+SFGV + E L+ ++ T L L+G
Sbjct: 174 YRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGI 233
Query: 187 AWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISMLTN 243
A R EL++ + ++ C + A+ RPT +I +L
Sbjct: 234 AQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKT 290
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 80/157 (50%), Gaps = 7/157 (4%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKIL--IYEYMPNKSLDCFLFDPTKT-GLLGWEMR 70
+E+ L+ +L+H N+VR + I+ L + EY L + TK L E
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 71 VRILEGVAQGLLYLHHYSR--LRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
+R++ + L H S V+HRDLK +N+ LD N K+ DFG+AR+ DE
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDE--D 171
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
K VGT YMSPE R ++ KSD++S G L+ E
Sbjct: 172 FAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 19/229 (8%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
+EEF E ++ +++H NLV+L G C +I E+M +L +L + + +
Sbjct: 53 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSA-- 110
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
V +L Q + + + IHRDL A N L+ N K++DFG++RL GD +
Sbjct: 111 --VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 168
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAW 188
+ + +PE FSIKSDV++FGVL+ E +++ + + D
Sbjct: 169 HAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGIDL-------- 218
Query: 189 NLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEV 237
+ +EL++ + + + + C Q N +DRP+ E+
Sbjct: 219 -----SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 19/229 (8%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
+EEF E ++ +++H NLV+L G C +I E+M +L +L + + +
Sbjct: 53 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-- 110
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
V +L Q + + + IHRDL A N L+ N K++DFG++RL GD +
Sbjct: 111 --VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 168
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAW 188
+ + +PE FSIKSDV++FGVL+ E +++ + + D
Sbjct: 169 HAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGIDL-------- 218
Query: 189 NLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEV 237
+ +EL++ + + + + C Q N +DRP+ E+
Sbjct: 219 -----SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 19/229 (8%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
+EEF E ++ +++H NLV+L G C +I E+M +L +L + + +
Sbjct: 58 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-- 115
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
V +L Q + + + IHRDL A N L+ N K++DFG++RL GD +
Sbjct: 116 --VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 173
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAW 188
+ + +PE FSIKSDV++FGVL+ E +++ + + D
Sbjct: 174 HAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGIDL-------- 223
Query: 189 NLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEV 237
+ +EL++ + + + + C Q N +DRP+ E+
Sbjct: 224 -----SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 19/229 (8%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
+EEF E ++ +++H NLV+L G C +I E+M +L +L + + +
Sbjct: 53 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSA-- 110
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
V +L Q + + + IHRDL A N L+ N K++DFG++RL GD +
Sbjct: 111 --VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 168
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAW 188
+ + +PE FSIKSDV++FGVL+ E +++ + + D
Sbjct: 169 HAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGIDL-------- 218
Query: 189 NLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEV 237
+ +EL++ + + + + C Q N +DRP+ E+
Sbjct: 219 -----SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 19/229 (8%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
+EEF E ++ +++H NLV+L G C +I E+M +L +L + + +
Sbjct: 58 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-- 115
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
V +L Q + + + IHRDL A N L+ N K++DFG++RL GD +
Sbjct: 116 --VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTA 173
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAW 188
+ + +PE FSIKSDV++FGVL+ E +++ + + D
Sbjct: 174 HAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGIDL-------- 223
Query: 189 NLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEV 237
+ +EL++ + + + + C Q N +DRP+ E+
Sbjct: 224 -----SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 19/229 (8%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
+EEF E ++ +++H NLV+L G C +I E+M +L +L + + +
Sbjct: 57 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-- 114
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
V +L Q + + + IHRDL A N L+ N K++DFG++RL GD +
Sbjct: 115 --VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 172
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAW 188
+ + +PE FSIKSDV++FGVL+ E +++ + + D
Sbjct: 173 HAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGIDL-------- 222
Query: 189 NLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEV 237
+ +EL++ + + + + C Q N +DRP+ E+
Sbjct: 223 -----SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 266
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 19/229 (8%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
+EEF E ++ +++H NLV+L G C +I E+M +L +L + + +
Sbjct: 58 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-- 115
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
V +L Q + + + IHRDL A N L+ N K++DFG++RL GD +
Sbjct: 116 --VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 173
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAW 188
+ + +PE FSIKSDV++FGVL+ E +++ + + D
Sbjct: 174 HAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGIDL-------- 223
Query: 189 NLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEV 237
+ +EL++ + + + + C Q N +DRP+ E+
Sbjct: 224 -----SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 19/229 (8%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
+EEF E ++ +++H NLV+L G C +I E+M +L +L + + +
Sbjct: 53 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-- 110
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
V +L Q + + + IHRDL A N L+ N K++DFG++RL GD +
Sbjct: 111 --VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 168
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAW 188
+ + +PE FSIKSDV++FGVL+ E +++ + + D
Sbjct: 169 HAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGIDL-------- 218
Query: 189 NLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEV 237
+ +EL++ + + + + C Q N +DRP+ E+
Sbjct: 219 -----SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 5 SGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEK--ILIYEYMPNKSLDCFLFDPTKT 62
G + + K E+ ++ L H N+V+ G C E G LI E++P+ SL +L P
Sbjct: 51 GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNK 108
Query: 63 GLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG 122
+ + +++ + +G+ YL + +HRDL A N+L++S KI DFG+ +
Sbjct: 109 NKINLKQQLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 165
Query: 123 GDELQSNTK--RIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
D+ K R + Y +PE ++ F I SDV+SFGV + E L+
Sbjct: 166 TDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 19/229 (8%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
+EEF E ++ +++H NLV+L G C +I E+M +L +L + + +
Sbjct: 58 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNA-- 115
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
V +L Q + + + IHRDL A N L+ N K++DFG++RL GD +
Sbjct: 116 --VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 173
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAW 188
+ + +PE FSIKSDV++FGVL+ E +++ + + D
Sbjct: 174 HAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGIDL-------- 223
Query: 189 NLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEV 237
+ +EL++ + + + + C Q N +DRP+ E+
Sbjct: 224 -----SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 5 SGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEK--ILIYEYMPNKSLDCFLFDPTKT 62
G + + K E+ ++ L H N+V+ G C E G LI E++P+ SL +L P
Sbjct: 63 GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNK 120
Query: 63 GLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG 122
+ + +++ + +G+ YL + +HRDL A N+L++S KI DFG+ +
Sbjct: 121 NKINLKQQLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177
Query: 123 GDELQSNTK--RIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
D+ K R + Y +PE ++ F I SDV+SFGV + E L+
Sbjct: 178 TDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 19/229 (8%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
+EEF E ++ +++H NLV+L G C +I E+M +L +L + + +
Sbjct: 53 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-- 110
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
V +L Q + + + IHRDL A N L+ N K++DFG++RL GD +
Sbjct: 111 --VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 168
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAW 188
+ + +PE FSIKSDV++FGVL+ E +++ + + D
Sbjct: 169 HAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGIDL-------- 218
Query: 189 NLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEV 237
+ +EL++ + + + + C Q N +DRP+ E+
Sbjct: 219 -----SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 19/229 (8%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
+EEF E ++ +++H NLV+L G C +I E+M +L +L + + +
Sbjct: 53 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-- 110
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
V +L Q + + + IHRDL A N L+ N K++DFG++RL GD +
Sbjct: 111 --VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 168
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAW 188
+ + +PE FSIKSDV++FGVL+ E +++ + + D
Sbjct: 169 HAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGIDL-------- 218
Query: 189 NLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEV 237
+ +EL++ + + + + C Q N +DRP+ E+
Sbjct: 219 -----SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 110/241 (45%), Gaps = 22/241 (9%)
Query: 12 FKNEMMLIAKLQHRNLVRLFGCCIEHGEKI--LIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
++ E+ ++ L H ++V+ GCC + GEK L+ EY+P SL +L +G
Sbjct: 58 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHCVGLAQ 113
Query: 70 RVRILEGVAQGLLYLH--HYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG-GDEL 126
+ + + +G+ YLH HY IHR L A N+LLD++ KI DFG+A+ G E
Sbjct: 114 LLLFAQQICEGMAYLHAQHY-----IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEY 168
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGH 186
+ + +PE F SDV+SFGV + E L+ + +T L+GH
Sbjct: 169 YRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGH 228
Query: 187 AWNLWNDGRAWELMDSILQNDASYPMLNR----YINVALLCVQENAADRPTMLEVISMLT 242
R EL L+ P +R ++ C + A+ RPT ++ +L
Sbjct: 229 TQGQMTVLRLTEL----LERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQ 284
Query: 243 N 243
Sbjct: 285 T 285
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 110/241 (45%), Gaps = 22/241 (9%)
Query: 12 FKNEMMLIAKLQHRNLVRLFGCCIEHGEKI--LIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
++ E+ ++ L H ++V+ GCC + GEK L+ EY+P SL +L +G
Sbjct: 57 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHCVGLAQ 112
Query: 70 RVRILEGVAQGLLYLH--HYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG-GDEL 126
+ + + +G+ YLH HY IHR L A N+LLD++ KI DFG+A+ G E
Sbjct: 113 LLLFAQQICEGMAYLHAQHY-----IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEY 167
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGH 186
+ + +PE F SDV+SFGV + E L+ + +T L+GH
Sbjct: 168 YRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGH 227
Query: 187 AWNLWNDGRAWELMDSILQNDASYPMLNR----YINVALLCVQENAADRPTMLEVISMLT 242
R EL L+ P +R ++ C + A+ RPT ++ +L
Sbjct: 228 TQGQMTVLRLTEL----LERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQ 283
Query: 243 N 243
Sbjct: 284 T 284
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 19/229 (8%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
+EEF E ++ +++H NLV+L G C +I E+M +L +L + + +
Sbjct: 54 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNA-- 111
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
V +L Q + + + IHRDL A N L+ N K++DFG++RL GD +
Sbjct: 112 --VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTA 169
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAW 188
+ + +PE FSIKSDV++FGVL+ E +++ + + D
Sbjct: 170 HAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGIDL-------- 219
Query: 189 NLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEV 237
+ +EL++ + + + + C Q N +DRP+ E+
Sbjct: 220 -----SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 19/229 (8%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
+EEF E ++ +++H NLV+L G C +I E+M +L +L + + +
Sbjct: 55 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-- 112
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
V +L Q + + + IHRDL A N L+ N K++DFG++RL GD +
Sbjct: 113 --VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 170
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAW 188
+ + +PE FSIKSDV++FGVL+ E +++ + + D
Sbjct: 171 HAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGIDL-------- 220
Query: 189 NLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEV 237
+ +EL++ + + + + C Q N +DRP+ E+
Sbjct: 221 -----SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 19/229 (8%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
+EEF E ++ +++H NLV+L G C +I E+M +L +L + + +
Sbjct: 55 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-- 112
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
V +L Q + + + IHRDL A N L+ N K++DFG++RL GD +
Sbjct: 113 --VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 170
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAW 188
+ + +PE FSIKSDV++FGVL+ E +++ + + D
Sbjct: 171 HAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGIDL-------- 220
Query: 189 NLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEV 237
+ +EL++ + + + + C Q N +DRP+ E+
Sbjct: 221 -----SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 108/240 (45%), Gaps = 41/240 (17%)
Query: 3 SQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKT 62
QS + ++ E+ + KL+H N ++ GC + L+ EY + D L + K
Sbjct: 92 KQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASD--LLEVHKK 149
Query: 63 GLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG 122
L E+ + G QGL YLH ++ +IHRD+KA NILL K+ DFG A +
Sbjct: 150 PLQEVEIAA-VTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIM- 204
Query: 123 GDELQSNTKRIVGTYGYMSPEYAL---RGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTD 179
+ VGT +M+PE L G + K DV+S G+ +E +++ +N +
Sbjct: 205 -----APANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL--AERKPPLFNMN 257
Query: 180 SLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNR------YINVALLCVQENAADRPT 233
+++ L H I QN++ P L + N C+Q+ DRPT
Sbjct: 258 AMSALYH----------------IAQNES--PALQSGHWSEYFRNFVDSCLQKIPQDRPT 299
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 121/257 (47%), Gaps = 36/257 (14%)
Query: 12 FKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLF--DP----TKTGLL 65
F E+ ++++ H N+V+L+G C+ L+ EY SL L +P T +
Sbjct: 48 FIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAM 105
Query: 66 GWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP-KISDFGIARLFGGD 124
W ++ +QG+ YLH +IHRDLK N+LL + KI DFG A
Sbjct: 106 SWCLQC------SQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA-----C 154
Query: 125 ELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLL 184
++Q++ G+ +M+PE +S K DVFS+G+++ E ++ +K + ++
Sbjct: 155 DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM 214
Query: 185 GHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISMLTNE 244
W + N R L+ ++ + S ++ R C ++ + RP+M E++ ++T+
Sbjct: 215 ---WAVHNGTRP-PLIKNLPKPIES--LMTR-------CWSKDPSQRPSMEEIVKIMTHL 261
Query: 245 NVILPS---PLQPAFSH 258
P PLQ H
Sbjct: 262 MRYFPGADEPLQYPCQH 278
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 19/229 (8%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
+EEF E ++ +++H NLV+L G C +I E+M +L +L + + +
Sbjct: 58 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-- 115
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
V +L Q + + + IHRDL A N L+ N K++DFG++RL GD +
Sbjct: 116 --VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 173
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAW 188
+ + +PE FSIKSDV++FGVL+ E +++ + + D
Sbjct: 174 HAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGIDL-------- 223
Query: 189 NLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEV 237
+ +EL++ + + + + C Q N +DRP+ E+
Sbjct: 224 -----SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 108/240 (45%), Gaps = 41/240 (17%)
Query: 3 SQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKT 62
QS + ++ E+ + KL+H N ++ GC + L+ EY + D L + K
Sbjct: 53 KQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASD--LLEVHKK 110
Query: 63 GLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG 122
L E+ + G QGL YLH ++ +IHRD+KA NILL K+ DFG A +
Sbjct: 111 PLQEVEIAA-VTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIM- 165
Query: 123 GDELQSNTKRIVGTYGYMSPEYAL---RGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTD 179
+ VGT +M+PE L G + K DV+S G+ +E +++ +N +
Sbjct: 166 -----APANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL--AERKPPLFNMN 218
Query: 180 SLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNR------YINVALLCVQENAADRPT 233
+++ L H I QN++ P L + N C+Q+ DRPT
Sbjct: 219 AMSALYH----------------IAQNES--PALQSGHWSEYFRNFVDSCLQKIPQDRPT 260
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 121/257 (47%), Gaps = 36/257 (14%)
Query: 12 FKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLF--DP----TKTGLL 65
F E+ ++++ H N+V+L+G C+ L+ EY SL L +P T +
Sbjct: 49 FIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAM 106
Query: 66 GWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP-KISDFGIARLFGGD 124
W ++ +QG+ YLH +IHRDLK N+LL + KI DFG A
Sbjct: 107 SWCLQC------SQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA-----C 155
Query: 125 ELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLL 184
++Q++ G+ +M+PE +S K DVFS+G+++ E ++ +K + ++
Sbjct: 156 DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM 215
Query: 185 GHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISMLTNE 244
W + N R L+ ++ + S ++ R C ++ + RP+M E++ ++T+
Sbjct: 216 ---WAVHNGTRP-PLIKNLPKPIES--LMTR-------CWSKDPSQRPSMEEIVKIMTHL 262
Query: 245 NVILPS---PLQPAFSH 258
P PLQ H
Sbjct: 263 MRYFPGADEPLQYPCQH 279
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 19/229 (8%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
+EEF E ++ +++H NLV+L G C +I E+M +L +L + + +
Sbjct: 66 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-- 123
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
V +L Q + + + IHRDL A N L+ N K++DFG++RL GD +
Sbjct: 124 --VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 181
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAW 188
+ + +PE FSIKSDV++FGVL+ E +++ + + D
Sbjct: 182 HAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGIDL-------- 231
Query: 189 NLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEV 237
+ +EL++ + + + + C Q N +DRP+ E+
Sbjct: 232 -----SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 275
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 111/243 (45%), Gaps = 33/243 (13%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSL---DCFLF--DPTKTGL 64
++FKNE+ +I +++ + G + E +IYEYM N S+ D + F D T
Sbjct: 88 DDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCF 147
Query: 65 LGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGD 124
+ ++ I++ V Y+H+ + HRD+K SNIL+D N K+SDFG +
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK 205
Query: 125 ELQSNTKRIVGTYGYMSPEYALR--GLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLT 182
+++ + GTY +M PE+ K D++S G+ + FYN +
Sbjct: 206 KIKGSR----GTYEFMPPEFFSNESSYNGAKVDIWSLGICLY--------VMFYNVVPFS 253
Query: 183 LLGHAWNLWNDGRAWELMDSILQNDASYPMLNRY------------INVALLCVQENAAD 230
L L+N+ R + + +N YP+ N+ I+ L +++N A+
Sbjct: 254 LKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAE 313
Query: 231 RPT 233
R T
Sbjct: 314 RIT 316
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 106/237 (44%), Gaps = 46/237 (19%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
+EF E ++ L H LV+L+G C + +I EYM N L +L EM
Sbjct: 44 DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR----------EM 93
Query: 70 RVR--------ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
R R + + V + + YL + +HRDL A N L++ K+SDFG++R
Sbjct: 94 RHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV 150
Query: 122 GGDELQSNTKRIVGT---YGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAH--FY 176
DE S+ VG+ + PE + FS KSD+++FGVL+ E S K + F
Sbjct: 151 LDDEYTSS----VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT 206
Query: 177 NTDSLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPT 233
N+++ + L+ A E + +I+ + C E A +RPT
Sbjct: 207 NSETAEHIAQGLRLYRPHLASEKVYTIMYS----------------CWHEKADERPT 247
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 80/157 (50%), Gaps = 7/157 (4%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKIL--IYEYMPNKSLDCFLFDPTKT-GLLGWEMR 70
+E+ L+ +L+H N+VR + I+ L + EY L + TK L E
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 71 VRILEGVAQGLLYLHHYSR--LRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
+R++ + L H S V+HRDLK +N+ LD N K+ DFG+AR+ D S
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD--TS 171
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
K VGT YMSPE R ++ KSD++S G L+ E
Sbjct: 172 FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 106/238 (44%), Gaps = 46/238 (19%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
+EF E ++ L H LV+L+G C + +I EYM N L +L EM
Sbjct: 64 DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR----------EM 113
Query: 70 RVR--------ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
R R + + V + + YL + +HRDL A N L++ K+SDFG++R
Sbjct: 114 RHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV 170
Query: 122 GGDELQSNTKRIVGT---YGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAH--FY 176
DE S+ VG+ + PE + FS KSD+++FGVL+ E S K + F
Sbjct: 171 LDDEYTSS----VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT 226
Query: 177 NTDSLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTM 234
N+++ + L+ A E + +I+ + C E A +RPT
Sbjct: 227 NSETAEHIAQGLRLYRPHLASEKVYTIMYS----------------CWHEKADERPTF 268
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 80/157 (50%), Gaps = 7/157 (4%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKIL--IYEYMPNKSLDCFLFDPTKT-GLLGWEMR 70
+E+ L+ +L+H N+VR + I+ L + EY L + TK L E
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 71 VRILEGVAQGLLYLHHYSR--LRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
+R++ + L H S V+HRDLK +N+ LD N K+ DFG+AR+ D S
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD--TS 171
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
K VGT YMSPE R ++ KSD++S G L+ E
Sbjct: 172 FAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 106/238 (44%), Gaps = 46/238 (19%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
+EF E ++ L H LV+L+G C + +I EYM N L +L EM
Sbjct: 48 DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR----------EM 97
Query: 70 RVR--------ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
R R + + V + + YL + +HRDL A N L++ K+SDFG++R
Sbjct: 98 RHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV 154
Query: 122 GGDELQSNTKRIVGT---YGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAH--FY 176
DE S+ VG+ + PE + FS KSD+++FGVL+ E S K + F
Sbjct: 155 LDDEYTSS----VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT 210
Query: 177 NTDSLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTM 234
N+++ + L+ A E + +I+ + C E A +RPT
Sbjct: 211 NSETAEHIAQGLRLYRPHLASEKVYTIMYS----------------CWHEKADERPTF 252
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 19/229 (8%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
+EEF E ++ +++H NLV+L G C +I E+M +L +L + + +
Sbjct: 55 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-- 112
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
V +L Q + + + IHRDL A N L+ N K++DFG++RL GD +
Sbjct: 113 --VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 170
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAW 188
+ +PE FSIKSDV++FGVL+ E +++ + + D
Sbjct: 171 PAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGIDL-------- 220
Query: 189 NLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEV 237
+ +EL++ + + + + C Q N +DRP+ E+
Sbjct: 221 -----SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 19/229 (8%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
+EEF E ++ +++H NLV+L G C +I E+M +L +L + + +
Sbjct: 54 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-- 111
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
V +L Q + + + IHRDL A N L+ N K++DFG++RL GD +
Sbjct: 112 --VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 169
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAW 188
+ +PE FSIKSDV++FGVL+ E +++ + + D
Sbjct: 170 PAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGIDL-------- 219
Query: 189 NLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEV 237
+ +EL++ + + + + C Q N +DRP+ E+
Sbjct: 220 -----SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 106/238 (44%), Gaps = 46/238 (19%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
+EF E ++ L H LV+L+G C + +I EYM N L +L EM
Sbjct: 55 DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR----------EM 104
Query: 70 RVR--------ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
R R + + V + + YL + +HRDL A N L++ K+SDFG++R
Sbjct: 105 RHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV 161
Query: 122 GGDELQSNTKRIVGT---YGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAH--FY 176
DE S+ VG+ + PE + FS KSD+++FGVL+ E S K + F
Sbjct: 162 LDDEYTSS----VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT 217
Query: 177 NTDSLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTM 234
N+++ + L+ A E + +I+ + C E A +RPT
Sbjct: 218 NSETAEHIAQGLRLYRPHLASEKVYTIMYS----------------CWHEKADERPTF 259
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 106/237 (44%), Gaps = 46/237 (19%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
+EF E ++ L H LV+L+G C + +I EYM N L +L EM
Sbjct: 49 DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR----------EM 98
Query: 70 RVR--------ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
R R + + V + + YL + +HRDL A N L++ K+SDFG++R
Sbjct: 99 RHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV 155
Query: 122 GGDELQSNTKRIVGT---YGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAH--FY 176
DE S+ VG+ + PE + FS KSD+++FGVL+ E S K + F
Sbjct: 156 LDDEYTSS----VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT 211
Query: 177 NTDSLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPT 233
N+++ + L+ A E + +I+ + C E A +RPT
Sbjct: 212 NSETAEHIAQGLRLYRPHLASEKVYTIMYS----------------CWHEKADERPT 252
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 106/240 (44%), Gaps = 40/240 (16%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
+EF E ++ L H LV+L+G C + +I EYM N L +L EM
Sbjct: 49 DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR----------EM 98
Query: 70 RVR--------ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
R R + + V + + YL + +HRDL A N L++ K+SDFG++R
Sbjct: 99 RHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV 155
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAH--FYNTD 179
DE S+ + PE + FS KSD+++FGVL+ E S K + F N++
Sbjct: 156 LDDEYTSSRGSKFPV-RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE 214
Query: 180 SLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVIS 239
+ + L+ A E + +I+ + C E A +RPT ++S
Sbjct: 215 TAEHIAQGLRLYRPHLASEKVYTIMYS----------------CWHEKADERPTFKILLS 258
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 106/238 (44%), Gaps = 46/238 (19%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
+EF E ++ L H LV+L+G C + +I EYM N L +L EM
Sbjct: 64 DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR----------EM 113
Query: 70 RVR--------ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
R R + + V + + YL + +HRDL A N L++ K+SDFG++R
Sbjct: 114 RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYV 170
Query: 122 GGDELQSNTKRIVGT---YGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAH--FY 176
DE S+ VG+ + PE + FS KSD+++FGVL+ E S K + F
Sbjct: 171 LDDEETSS----VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT 226
Query: 177 NTDSLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTM 234
N+++ + L+ A E + +I+ + C E A +RPT
Sbjct: 227 NSETAEHIAQGLRLYRPHLASEKVYTIMYS----------------CWHEKADERPTF 268
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 14/237 (5%)
Query: 12 FKNEMMLIAKLQHRNLVRLFGCCIEHGEKIL--IYEYMPNKSLDCFLFDPTKTGLLGWEM 69
+K E+ ++ L H ++++ GCC + G L + EY+P SL +L P + +G
Sbjct: 80 WKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL--PRHS--IGLAQ 135
Query: 70 RVRILEGVAQGLLYLH--HYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG-GDEL 126
+ + + +G+ YLH HY IHRDL A N+LLD++ KI DFG+A+ G E
Sbjct: 136 LLLFAQQICEGMAYLHAQHY-----IHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEX 190
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGH 186
+ + +PE F SDV+SFGV + E L+ ++ T L L+G
Sbjct: 191 YRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGI 250
Query: 187 AWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISMLTN 243
A R EL++ + ++ C + A+ RPT +I +L
Sbjct: 251 AQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKT 307
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 19/229 (8%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
+EEF E ++ +++H NLV+L G C +I E+M +L +L + + +
Sbjct: 260 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-- 317
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
V +L Q + + + IHR+L A N L+ N K++DFG++RL GD +
Sbjct: 318 --VVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 375
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAW 188
+ + +PE FSIKSDV++FGVL+ E + + Y L+
Sbjct: 376 HAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YPGIDLS------ 426
Query: 189 NLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEV 237
+ +EL++ + + + + C Q N +DRP+ E+
Sbjct: 427 ------QVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 469
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 19/229 (8%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
+EEF E ++ +++H NLV+L G C +I E+M +L +L + + +
Sbjct: 299 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-- 356
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
V +L Q + + + IHR+L A N L+ N K++DFG++RL GD +
Sbjct: 357 --VVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 414
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAW 188
+ + +PE FSIKSDV++FGVL+ E + + Y L+
Sbjct: 415 HAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YPGIDLS------ 465
Query: 189 NLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEV 237
+ +EL++ + + + + C Q N +DRP+ E+
Sbjct: 466 ------QVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 508
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 8/171 (4%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEK--ILIYEYMPNKSLDCFLFD 58
L + + L +F+ E+ ++ LQH N+V+ G C G + LI EY+P SL +L
Sbjct: 46 LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-Q 104
Query: 59 PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
K + +++L+ +Q + + R IHRDL NIL+++ KI DFG+
Sbjct: 105 KHKERI----DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 160
Query: 119 RLFGGDELQSNTKRI-VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
++ D+ K + +PE FS+ SDV+SFGV++ E +
Sbjct: 161 KVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 8/171 (4%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEK--ILIYEYMPNKSLDCFLFD 58
L + + L +F+ E+ ++ LQH N+V+ G C G + LI EY+P SL +L
Sbjct: 45 LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-Q 103
Query: 59 PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
K + +++L+ +Q + + R IHRDL NIL+++ KI DFG+
Sbjct: 104 KHKERI----DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 159
Query: 119 RLFGGDELQSNTKRI-VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
++ D+ K + +PE FS+ SDV+SFGV++ E +
Sbjct: 160 KVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 19/229 (8%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
+EEF E ++ +++H NLV+L G C +I E+M +L +L + + +
Sbjct: 257 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-- 314
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
V +L Q + + + IHR+L A N L+ N K++DFG++RL GD +
Sbjct: 315 --VVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 372
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAW 188
+ + +PE FSIKSDV++FGVL+ E + + Y L+
Sbjct: 373 HAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP--YPGIDLS------ 423
Query: 189 NLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEV 237
+ +EL++ + + + + C Q N +DRP+ E+
Sbjct: 424 ------QVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 466
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 8/189 (4%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEK--ILIYEYMPNKSLDCFLFD 58
L + + L +F+ E+ ++ LQH N+V+ G C G + LI EY+P SL +L
Sbjct: 51 LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-Q 109
Query: 59 PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
K + +++L+ +Q + + R IHRDL NIL+++ KI DFG+
Sbjct: 110 KHKERI----DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 165
Query: 119 RLFGGDELQSNTKRI-VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYN 177
++ D+ K + +PE FS+ SDV+SFGV++ E + + +
Sbjct: 166 KVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP 225
Query: 178 TDSLTLLGH 186
+ + ++G+
Sbjct: 226 AEFMRMIGN 234
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 109/233 (46%), Gaps = 26/233 (11%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
+EF E + KL H LV+ +G C + ++ EY+ N L +L K GL ++
Sbjct: 48 DEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGK-GLEPSQL 106
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN 129
+ + V +G+ +L + + IHRDL A N L+D ++ K+SDFG+ R D+ S+
Sbjct: 107 -LEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS 162
Query: 130 TKRIVGT---YGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGH 186
VGT + +PE +S KSDV++FG+L+ E S K + T+S +L
Sbjct: 163 ----VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVL-- 216
Query: 187 AWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVIS 239
+ L L +D Y ++ C E RPT +++S
Sbjct: 217 -----KVSQGHRLYRPHLASDTIYQIMYS-------CWHELPEKRPTFQQLLS 257
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 8/171 (4%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEK--ILIYEYMPNKSLDCFLFD 58
L + + L +F+ E+ ++ LQH N+V+ G C G + LI EY+P SL +L
Sbjct: 47 LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-Q 105
Query: 59 PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
K + +++L+ +Q + + R IHRDL NIL+++ KI DFG+
Sbjct: 106 KHKERI----DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
Query: 119 RLFGGDELQSNTKRI-VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
++ D+ K + +PE FS+ SDV+SFGV++ E +
Sbjct: 162 KVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 8/171 (4%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEK--ILIYEYMPNKSLDCFLFD 58
L + + L +F+ E+ ++ LQH N+V+ G C G + LI EY+P SL +L
Sbjct: 50 LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-Q 108
Query: 59 PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
K + +++L+ +Q + + R IHRDL NIL+++ KI DFG+
Sbjct: 109 KHKERI----DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
Query: 119 RLFGGDELQSNTKRI-VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
++ D+ K + +PE FS+ SDV+SFGV++ E +
Sbjct: 165 KVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 8/171 (4%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEK--ILIYEYMPNKSLDCFLFD 58
L + + L +F+ E+ ++ LQH N+V+ G C G + LI EY+P SL +L
Sbjct: 78 LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-Q 136
Query: 59 PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
K + +++L+ +Q + + R IHRDL NIL+++ KI DFG+
Sbjct: 137 KHKERI----DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 192
Query: 119 RLFGGDELQSNTKRI-VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
++ D+ K + +PE FS+ SDV+SFGV++ E +
Sbjct: 193 KVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 8/171 (4%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEK--ILIYEYMPNKSLDCFLFD 58
L + + L +F+ E+ ++ LQH N+V+ G C G + LI EY+P SL +L
Sbjct: 53 LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-Q 111
Query: 59 PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
K + +++L+ +Q + + R IHRDL NIL+++ KI DFG+
Sbjct: 112 KHKERI----DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 167
Query: 119 RLFGGDELQSNTKRI-VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
++ D+ K + +PE FS+ SDV+SFGV++ E +
Sbjct: 168 KVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 8/171 (4%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEK--ILIYEYMPNKSLDCFLFD 58
L + + L +F+ E+ ++ LQH N+V+ G C G + LI EY+P SL +L
Sbjct: 47 LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-Q 105
Query: 59 PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
K + +++L+ +Q + + R IHRDL NIL+++ KI DFG+
Sbjct: 106 KHKERI----DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
Query: 119 RLFGGDELQSNTKRI-VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
++ D+ K + +PE FS+ SDV+SFGV++ E +
Sbjct: 162 KVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 8/171 (4%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEK--ILIYEYMPNKSLDCFLFD 58
L + + L +F+ E+ ++ LQH N+V+ G C G + LI EY+P SL +L
Sbjct: 52 LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-Q 110
Query: 59 PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
K + +++L+ +Q + + R IHRDL NIL+++ KI DFG+
Sbjct: 111 KHKERI----DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 166
Query: 119 RLFGGDELQSNTKRI-VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
++ D+ K + +PE FS+ SDV+SFGV++ E +
Sbjct: 167 KVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 8/171 (4%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEK--ILIYEYMPNKSLDCFLFD 58
L + + L +F+ E+ ++ LQH N+V+ G C G + LI EY+P SL +L
Sbjct: 54 LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-Q 112
Query: 59 PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
K + +++L+ +Q + + R IHRDL NIL+++ KI DFG+
Sbjct: 113 KHKERI----DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 168
Query: 119 RLFGGDELQSNTKRI-VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
++ D+ K + +PE FS+ SDV+SFGV++ E +
Sbjct: 169 KVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 8/171 (4%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEK--ILIYEYMPNKSLDCFLFD 58
L + + L +F+ E+ ++ LQH N+V+ G C G + LI EY+P SL +L
Sbjct: 65 LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-Q 123
Query: 59 PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
K + +++L+ +Q + + R IHRDL NIL+++ KI DFG+
Sbjct: 124 KHKERI----DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 179
Query: 119 RLFGGDELQSNTKRI-VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
++ D+ K + +PE FS+ SDV+SFGV++ E +
Sbjct: 180 KVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 8/171 (4%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEK--ILIYEYMPNKSLDCFLFD 58
L + + L +F+ E+ ++ LQH N+V+ G C G + LI EY+P SL +L
Sbjct: 65 LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-Q 123
Query: 59 PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
K + +++L+ +Q + + R IHRDL NIL+++ KI DFG+
Sbjct: 124 KHKERI----DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 179
Query: 119 RLFGGDELQSNTKRI-VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
++ D+ K + +PE FS+ SDV+SFGV++ E +
Sbjct: 180 KVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIE-HGEKILIYEYMPNKSLDCFL----FDPTKTG 63
+ +F E +++ H N++ L G C+ G +++ YM + L F+ +PT
Sbjct: 74 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 133
Query: 64 LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGG 123
L+G+ ++V A+G+ YL + + +HRDL A N +LD K++DFG+AR
Sbjct: 134 LIGFGLQV------AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 184
Query: 124 DELQS--NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
E S N +M+ E F+ KSDV+SFGVL+ E ++
Sbjct: 185 KEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 8/171 (4%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEK--ILIYEYMPNKSLDCFLFD 58
L + + L +F+ E+ ++ LQH N+V+ G C G + LI EY+P SL +L
Sbjct: 50 LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQA 109
Query: 59 PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
+ +++L+ +Q + + R IHRDL NIL+++ KI DFG+
Sbjct: 110 HAERI-----DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
Query: 119 RLFGGDELQSNTKRI-VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
++ D+ K + +PE FS+ SDV+SFGV++ E +
Sbjct: 165 KVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIE-HGEKILIYEYMPNKSLDCFL----FDPTKTG 63
+ +F E +++ H N++ L G C+ G +++ YM + L F+ +PT
Sbjct: 75 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 134
Query: 64 LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGG 123
L+G+ ++V A+G+ YL + + +HRDL A N +LD K++DFG+AR
Sbjct: 135 LIGFGLQV------AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 185
Query: 124 DELQS--NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
E S N +M+ E F+ KSDV+SFGVL+ E ++
Sbjct: 186 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIE-HGEKILIYEYMPNKSLDCFL----FDPTKTG 63
+ +F E +++ H N++ L G C+ G +++ YM + L F+ +PT
Sbjct: 94 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 153
Query: 64 LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGG 123
L+G+ ++V A+G+ YL + + +HRDL A N +LD K++DFG+AR
Sbjct: 154 LIGFGLQV------AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 204
Query: 124 DELQS--NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
E S N +M+ E F+ KSDV+SFGVL+ E ++
Sbjct: 205 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIE-HGEKILIYEYMPNKSLDCFL----FDPTKTG 63
+ +F E +++ H N++ L G C+ G +++ YM + L F+ +PT
Sbjct: 93 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 152
Query: 64 LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGG 123
L+G+ ++V A+G+ YL + + +HRDL A N +LD K++DFG+AR
Sbjct: 153 LIGFGLQV------AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 203
Query: 124 DELQS--NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
E S N +M+ E F+ KSDV+SFGVL+ E ++
Sbjct: 204 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIE-HGEKILIYEYMPNKSLDCFL----FDPTKTG 63
+ +F E +++ H N++ L G C+ G +++ YM + L F+ +PT
Sbjct: 75 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 134
Query: 64 LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGG 123
L+G+ ++V A+G+ YL + + +HRDL A N +LD K++DFG+AR
Sbjct: 135 LIGFGLQV------AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 185
Query: 124 DELQS--NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
E S N +M+ E F+ KSDV+SFGVL+ E ++
Sbjct: 186 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIE-HGEKILIYEYMPNKSLDCFL----FDPTKTG 63
+ +F E +++ H N++ L G C+ G +++ YM + L F+ +PT
Sbjct: 74 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 133
Query: 64 LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGG 123
L+G+ ++V A+G+ YL + + +HRDL A N +LD K++DFG+AR
Sbjct: 134 LIGFGLQV------AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 184
Query: 124 DELQS--NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
E S N +M+ E F+ KSDV+SFGVL+ E ++
Sbjct: 185 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 84/167 (50%), Gaps = 12/167 (7%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
NE++++ QH N+V ++ + E ++ E++ +L D L E +
Sbjct: 91 NEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALT----DIVSQVRLNEEQIATV 146
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
E V Q L YLH VIHRD+K+ +ILL + K+SDFG D K +
Sbjct: 147 CEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD--VPKRKXL 201
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDS 180
VGT +M+PE R L++ + D++S G++V+E + + Y +DS
Sbjct: 202 VGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP---YFSDS 245
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIE-HGEKILIYEYMPNKSLDCFL----FDPTKTG 63
+ +F E +++ H N++ L G C+ G +++ YM + L F+ +PT
Sbjct: 72 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 131
Query: 64 LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGG 123
L+G+ ++V A+G+ YL + + +HRDL A N +LD K++DFG+AR
Sbjct: 132 LIGFGLQV------AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 182
Query: 124 DELQS--NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
E S N +M+ E F+ KSDV+SFGVL+ E ++
Sbjct: 183 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIE-HGEKILIYEYMPNKSLDCFL----FDPTKTG 63
+ +F E +++ H N++ L G C+ G +++ YM + L F+ +PT
Sbjct: 73 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 132
Query: 64 LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGG 123
L+G+ ++V A+G+ +L + + +HRDL A N +LD K++DFG+AR
Sbjct: 133 LIGFGLQV------AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 183
Query: 124 DELQS--NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
E S N +M+ E F+ KSDV+SFGVL+ E ++
Sbjct: 184 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIE-HGEKILIYEYMPNKSLDCFL----FDPTKTG 63
+ +F E +++ H N++ L G C+ G +++ YM + L F+ +PT
Sbjct: 73 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 132
Query: 64 LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGG 123
L+G+ ++V A+G+ YL + + +HRDL A N +LD K++DFG+AR
Sbjct: 133 LIGFGLQV------AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 183
Query: 124 DELQS--NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
E S N +M+ E F+ KSDV+SFGVL+ E ++
Sbjct: 184 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIE-HGEKILIYEYMPNKSLDCFL----FDPTKTG 63
+ +F E +++ H N++ L G C+ G +++ YM + L F+ +PT
Sbjct: 70 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 129
Query: 64 LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGG 123
L+G+ ++V A+G+ YL + + +HRDL A N +LD K++DFG+AR
Sbjct: 130 LIGFGLQV------AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180
Query: 124 DELQS--NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
E S N +M+ E F+ KSDV+SFGVL+ E ++
Sbjct: 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIE-HGEKILIYEYMPNKSLDCFL----FDPTKTG 63
+ +F E +++ H N++ L G C+ G +++ YM + L F+ +PT
Sbjct: 134 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 193
Query: 64 LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGG 123
L+G+ ++V A+G+ +L + + +HRDL A N +LD K++DFG+AR
Sbjct: 194 LIGFGLQV------AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 244
Query: 124 DELQS--NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
E S N +M+ E F+ KSDV+SFGVL+ E ++
Sbjct: 245 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIE-HGEKILIYEYMPNKSLDCFL----FDPTKTG 63
+ +F E +++ H N++ L G C+ G +++ YM + L F+ +PT
Sbjct: 67 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 126
Query: 64 LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGG 123
L+G+ ++V A+G+ YL + + +HRDL A N +LD K++DFG+AR
Sbjct: 127 LIGFGLQV------AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 177
Query: 124 DELQS--NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
E S N +M+ E F+ KSDV+SFGVL+ E ++
Sbjct: 178 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIE-HGEKILIYEYMPNKSLDCFL----FDPTKTG 63
+ +F E +++ H N++ L G C+ G +++ YM + L F+ +PT
Sbjct: 75 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 134
Query: 64 LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGG 123
L+G+ ++V A+G+ +L + + +HRDL A N +LD K++DFG+AR
Sbjct: 135 LIGFGLQV------AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 185
Query: 124 DELQS--NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
E S N +M+ E F+ KSDV+SFGVL+ E ++
Sbjct: 186 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIE-HGEKILIYEYMPNKSLDCFL----FDPTKTG 63
+ +F E +++ H N++ L G C+ G +++ YM + L F+ +PT
Sbjct: 76 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 135
Query: 64 LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGG 123
L+G+ ++V A+G+ +L + + +HRDL A N +LD K++DFG+AR
Sbjct: 136 LIGFGLQV------AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 186
Query: 124 DELQS--NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
E S N +M+ E F+ KSDV+SFGVL+ E ++
Sbjct: 187 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIE-HGEKILIYEYMPNKSLDCFL----FDPTKTG 63
+ +F E +++ H N++ L G C+ G +++ YM + L F+ +PT
Sbjct: 80 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 139
Query: 64 LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGG 123
L+G+ ++V A+G+ +L + + +HRDL A N +LD K++DFG+AR
Sbjct: 140 LIGFGLQV------AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 190
Query: 124 DELQS--NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
E S N +M+ E F+ KSDV+SFGVL+ E ++
Sbjct: 191 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIE-HGEKILIYEYMPNKSLDCFL----FDPTKTG 63
+ +F E +++ H N++ L G C+ G +++ YM + L F+ +PT
Sbjct: 75 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 134
Query: 64 LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGG 123
L+G+ ++V A+G+ +L + + +HRDL A N +LD K++DFG+AR
Sbjct: 135 LIGFGLQV------AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 185
Query: 124 DELQS--NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
E S N +M+ E F+ KSDV+SFGVL+ E ++
Sbjct: 186 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIE-HGEKILIYEYMPNKSLDCFL----FDPTKTG 63
+ +F E +++ H N++ L G C+ G +++ YM + L F+ +PT
Sbjct: 76 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 135
Query: 64 LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGG 123
L+G+ ++V A+G+ +L + + +HRDL A N +LD K++DFG+AR
Sbjct: 136 LIGFGLQV------AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLD 186
Query: 124 DELQS--NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
E S N +M+ E F+ KSDV+SFGVL+ E ++
Sbjct: 187 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 8/171 (4%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEK--ILIYEYMPNKSLDCFLFD 58
L + + L +F+ E+ ++ LQH N+V+ G C G + LI E++P SL +L
Sbjct: 50 LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYL-Q 108
Query: 59 PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
K + +++L+ +Q + + R IHRDL NIL+++ KI DFG+
Sbjct: 109 KHKERI----DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
Query: 119 RLFGGDELQSNTKRI-VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
++ D+ K + +PE FS+ SDV+SFGV++ E +
Sbjct: 165 KVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRIL 74
E+ ++ + +V +G GE + E+M SLD L K G + ++ ++
Sbjct: 116 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVS 172
Query: 75 EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIV 134
V +GL YL + +++HRD+K SNIL++S K+ DFG++ G + S V
Sbjct: 173 IAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFV 226
Query: 135 GTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
GT YMSPE +S++SD++S G+ ++E
Sbjct: 227 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 257
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 12 FKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRV 71
F E+ ++ L+H N+++ G + I EY+ +L + + W RV
Sbjct: 54 FLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGII--KSMDSQYPWSQRV 111
Query: 72 RILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTK 131
+ +A G+ YLH + +IHRDL + N L+ N N ++DFG+ARL ++ Q
Sbjct: 112 SFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGL 168
Query: 132 R------------IVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
R +VG +M+PE + K DVFSFG+++ E +
Sbjct: 169 RSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIG 217
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 111/249 (44%), Gaps = 36/249 (14%)
Query: 10 EEFKNEMMLIAKL-QHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLL--- 65
E +E+ +++ L QH N+V L G C G ++I EY L FL + L
Sbjct: 86 EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKED 145
Query: 66 GWEMRVRIL----EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
G + +R L VAQG+ +L + IHRD+ A N+LL + KI DFG+AR
Sbjct: 146 GRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 202
Query: 122 GGDE---LQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAH---F 175
D ++ N + V +M+PE +++++SDV+S+G+L+ E S N +
Sbjct: 203 MNDSNYIVKGNARLPV---KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL 259
Query: 176 YNTDSLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTML 235
N+ L+ + + A + + SI+Q C RPT
Sbjct: 260 VNSKFYKLVKDGYQMAQPAFAPKNIYSIMQ----------------ACWALEPTHRPTFQ 303
Query: 236 EVISMLTNE 244
++ S L +
Sbjct: 304 QICSFLQEQ 312
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 119/260 (45%), Gaps = 39/260 (15%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLF--------DPTKT 62
EF NE ++ ++VRL G + +++ E M + L +L +P +
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 63 GLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIAR-LF 121
EM +++ +A G+ YL+ + +HRDL A N ++ + KI DFG+ R ++
Sbjct: 126 PPTLQEM-IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIY 181
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE--TLSSKKNAHFYNTD 179
D + K ++ +M+PE G+F+ SD++SFGV++ E +L+ + N
Sbjct: 182 ETDYYRKGGKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 240
Query: 180 SLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVIS 239
L + DG + D+ + R ++ +C Q N RPT LE+++
Sbjct: 241 VLKFV-------MDGGYLDQPDNCPE---------RVTDLMRMCWQFNPKMRPTFLEIVN 284
Query: 240 MLTNENVILPSPLQPAFSHV 259
+L ++ L P+F V
Sbjct: 285 LLKDD-------LHPSFPEV 297
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 79/153 (51%), Gaps = 9/153 (5%)
Query: 13 KNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVR 72
+ E+ ++++ + R FG ++ + +I EY+ S D K G L
Sbjct: 65 QQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSA----LDLLKPGPLEETYIAT 120
Query: 73 ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKR 132
IL + +GL YLH R IHRD+KA+N+LL + K++DFG+A +++ N
Sbjct: 121 ILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNX-- 175
Query: 133 IVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
VGT +M+PE + + K+D++S G+ +E
Sbjct: 176 FVGTPFWMAPEVIKQSAYDFKADIWSLGITAIE 208
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 8/171 (4%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEK--ILIYEYMPNKSLDCFLFD 58
L + + L +F+ E+ ++ LQH N+V+ G C G + LI EY+P SL +L
Sbjct: 47 LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-Q 105
Query: 59 PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
K + +++L+ +Q + + R IHRDL NIL+++ KI DFG+
Sbjct: 106 KHKERI----DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
Query: 119 RLFGGDELQSNTKRI-VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
++ D+ K + +PE FS+ SDV+SFGV++ E +
Sbjct: 162 KVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 119/260 (45%), Gaps = 39/260 (15%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLF--------DPTKT 62
EF NE ++ ++VRL G + +++ E M + L +L +P +
Sbjct: 65 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 124
Query: 63 GLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIAR-LF 121
EM +++ +A G+ YL+ + +HRDL A N ++ + KI DFG+ R ++
Sbjct: 125 PPTLQEM-IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIY 180
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE--TLSSKKNAHFYNTD 179
D + K ++ +M+PE G+F+ SD++SFGV++ E +L+ + N
Sbjct: 181 ETDYYRKGGKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 239
Query: 180 SLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVIS 239
L + DG + D+ + R ++ +C Q N RPT LE+++
Sbjct: 240 VLKFV-------MDGGYLDQPDNCPE---------RVTDLMRMCWQFNPKMRPTFLEIVN 283
Query: 240 MLTNENVILPSPLQPAFSHV 259
+L ++ L P+F V
Sbjct: 284 LLKDD-------LHPSFPEV 296
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRIL 74
E+ ++ + +V +G GE + E+M SLD L K G + ++ ++
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVS 110
Query: 75 EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIV 134
V +GL YL + +++HRD+K SNIL++S K+ DFG++ G + S V
Sbjct: 111 IAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFV 164
Query: 135 GTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
GT YMSPE +S++SD++S G+ ++E
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 195
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 111/249 (44%), Gaps = 36/249 (14%)
Query: 10 EEFKNEMMLIAKL-QHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLL--- 65
E +E+ +++ L QH N+V L G C G ++I EY L FL + L
Sbjct: 94 EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKED 153
Query: 66 GWEMRVRIL----EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
G + +R L VAQG+ +L + IHRD+ A N+LL + KI DFG+AR
Sbjct: 154 GRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 210
Query: 122 GGDE---LQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAH---F 175
D ++ N + V +M+PE +++++SDV+S+G+L+ E S N +
Sbjct: 211 MNDSNYIVKGNARLPV---KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL 267
Query: 176 YNTDSLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTML 235
N+ L+ + + A + + SI+Q C RPT
Sbjct: 268 VNSKFYKLVKDGYQMAQPAFAPKNIYSIMQ----------------ACWALEPTHRPTFQ 311
Query: 236 EVISMLTNE 244
++ S L +
Sbjct: 312 QICSFLQEQ 320
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRIL 74
E+ ++ + +V +G GE + E+M SLD L K G + ++ ++
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVS 110
Query: 75 EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIV 134
V +GL YL + +++HRD+K SNIL++S K+ DFG++ G + S V
Sbjct: 111 IAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFV 164
Query: 135 GTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
GT YMSPE +S++SD++S G+ ++E
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 195
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 115/259 (44%), Gaps = 37/259 (14%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLF--------DPTKT 62
EF NE ++ ++VRL G + +++ E M + L +L +P +
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 63 GLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG 122
EM +++ +A G+ YL+ + +HRDL A N ++ + KI DFG+ R
Sbjct: 126 PPTLQEM-IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIX 181
Query: 123 GDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE--TLSSKKNAHFYNTDS 180
+ + + +M+PE G+F+ SD++SFGV++ E +L+ + N
Sbjct: 182 ETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV 241
Query: 181 LTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISM 240
L + DG + D+ + R ++ +C Q N RPT LE++++
Sbjct: 242 LKFV-------MDGGYLDQPDNCPE---------RVTDLMRMCWQFNPKMRPTFLEIVNL 285
Query: 241 LTNENVILPSPLQPAFSHV 259
L ++ L P+F V
Sbjct: 286 LKDD-------LHPSFPEV 297
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRIL 74
E+ ++ + +V +G GE + E+M SLD L K G + ++ ++
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVS 110
Query: 75 EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIV 134
V +GL YL + +++HRD+K SNIL++S K+ DFG++ G + S V
Sbjct: 111 IAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFV 164
Query: 135 GTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
GT YMSPE +S++SD++S G+ ++E
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 195
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRIL 74
E+ ++ + +V +G GE + E+M SLD L K G + ++ ++
Sbjct: 81 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVS 137
Query: 75 EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIV 134
V +GL YL + +++HRD+K SNIL++S K+ DFG++ G + S V
Sbjct: 138 IAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFV 191
Query: 135 GTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
GT YMSPE +S++SD++S G+ ++E
Sbjct: 192 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 222
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 115/259 (44%), Gaps = 37/259 (14%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLF--------DPTKT 62
EF NE ++ ++VRL G + +++ E M + L +L +P +
Sbjct: 63 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 122
Query: 63 GLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG 122
EM +++ +A G+ YL+ + +HRDL A N ++ + KI DFG+ R
Sbjct: 123 PPTLQEM-IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIX 178
Query: 123 GDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE--TLSSKKNAHFYNTDS 180
+ + + +M+PE G+F+ SD++SFGV++ E +L+ + N
Sbjct: 179 ETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV 238
Query: 181 LTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISM 240
L + DG + D+ + R ++ +C Q N RPT LE++++
Sbjct: 239 LKFV-------MDGGYLDQPDNCPE---------RVTDLMRMCWQFNPKMRPTFLEIVNL 282
Query: 241 LTNENVILPSPLQPAFSHV 259
L ++ L P+F V
Sbjct: 283 LKDD-------LHPSFPEV 294
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRIL 74
E+ ++ + +V +G GE + E+M SLD L K G + ++ ++
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVS 110
Query: 75 EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIV 134
V +GL YL + +++HRD+K SNIL++S K+ DFG++ G + S V
Sbjct: 111 IAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFV 164
Query: 135 GTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
GT YMSPE +S++SD++S G+ ++E
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 195
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRIL 74
E+ ++ + +V +G GE + E+M SLD L K G + ++ ++
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVS 110
Query: 75 EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIV 134
V +GL YL + +++HRD+K SNIL++S K+ DFG++ G + S V
Sbjct: 111 IAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFV 164
Query: 135 GTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
GT YMSPE +S++SD++S G+ ++E
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 195
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 115/259 (44%), Gaps = 37/259 (14%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLF--------DPTKT 62
EF NE ++ ++VRL G + +++ E M + L +L +P +
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 63 GLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG 122
EM +++ +A G+ YL+ + +HRDL A N ++ + KI DFG+ R
Sbjct: 126 PPTLQEM-IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIX 181
Query: 123 GDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE--TLSSKKNAHFYNTDS 180
+ + + +M+PE G+F+ SD++SFGV++ E +L+ + N
Sbjct: 182 ETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV 241
Query: 181 LTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISM 240
L + DG + D+ + R ++ +C Q N RPT LE++++
Sbjct: 242 LKFV-------MDGGYLDQPDNCPE---------RVTDLMRMCWQFNPNMRPTFLEIVNL 285
Query: 241 LTNENVILPSPLQPAFSHV 259
L ++ L P+F V
Sbjct: 286 LKDD-------LHPSFPEV 297
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 75/139 (53%), Gaps = 9/139 (6%)
Query: 27 LVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRILEGVAQGLLYLHH 86
+V +G GE + E+M SLD L K G + ++ ++ V +GL YL
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 141
Query: 87 YSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGTYGYMSPEYAL 146
+ +++HRD+K SNIL++S K+ DFG++ G + S VGT YMSPE
Sbjct: 142 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQ 195
Query: 147 RGLFSIKSDVFSFGVLVLE 165
+S++SD++S G+ ++E
Sbjct: 196 GTHYSVQSDIWSMGLSLVE 214
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 119/276 (43%), Gaps = 39/276 (14%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL--FDPTKT-----G 63
EF NE ++ + ++VRL G + ++I E M L +L P
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 133
Query: 64 LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIAR-LFG 122
+++ +A G+ YL+ + +HRDL A N ++ + KI DFG+ R ++
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 190
Query: 123 GDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE--TLSSKKNAHFYNTDS 180
D + K ++ +MSPE G+F+ SDV+SFGV++ E TL+ + N
Sbjct: 191 TDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV 249
Query: 181 LTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISM 240
L + + +L + P + + +C Q N RP+ LE+IS
Sbjct: 250 LRFV--------------MEGGLLDKPDNCP--DMLFELMRMCWQYNPKMRPSFLEIISS 293
Query: 241 LTNENVILPSPLQPAFSHVRI--AENSSLPANCEVE 274
+ E ++P F V +E + LP E++
Sbjct: 294 IKEE-------MEPGFREVSFYYSEENKLPEPEELD 322
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 18/169 (10%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFD----PTKTGLLG 66
+F E ++I+KL H+N+VR G ++ + ++ E M L FL + P++ L
Sbjct: 80 DFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 139
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILL---DSNMNPKISDFGIARLFGG 123
+ + +A G YL IHRD+ A N LL KI DFG+AR
Sbjct: 140 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR---- 192
Query: 124 DELQSNTKRIVG----TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
D +++ R G +M PE + G+F+ K+D +SFGVL+ E S
Sbjct: 193 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 91/189 (48%), Gaps = 28/189 (14%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTG----- 63
L + +E ++ ++ H ++++L+G C + G +LI EY SL FL + K G
Sbjct: 70 LRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLG 129
Query: 64 ----------------LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSN 107
L + ++QG+ YL + ++++HRDL A NIL+
Sbjct: 130 SGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEG 186
Query: 108 MNPKISDFGIARLFGGDELQSNTKRIVG--TYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
KISDFG++R E S KR G +M+ E +++ +SDV+SFGVL+ E
Sbjct: 187 RKMKISDFGLSRDVY--EEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE 244
Query: 166 TLSSKKNAH 174
++ N +
Sbjct: 245 IVTLGGNPY 253
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 8/171 (4%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEK--ILIYEYMPNKSLDCFLFD 58
L + + L +F+ E+ ++ LQH N+V+ G C G + LI EY+P SL +L
Sbjct: 48 LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-Q 106
Query: 59 PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
K + +++L+ +Q + + R IHR+L NIL+++ KI DFG+
Sbjct: 107 KHKERI----DHIKLLQYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLT 162
Query: 119 RLFGGDELQSNTKRI-VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
++ D+ K + +PE FS+ SDV+SFGV++ E +
Sbjct: 163 KVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 87/176 (49%), Gaps = 17/176 (9%)
Query: 7 QGLEEFKNEMMLIAKL-QHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGL- 64
+ L + +EM ++ + +H+N++ L G C + G +I EY +L +L G+
Sbjct: 82 KDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 65 ------------LGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKI 112
+ ++ V +A+G+ YL + + IHRDL A N+L+ N KI
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKI 198
Query: 113 SDFGIARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+DFG+AR + NT +M+PE +++ +SDV+SFGVL+ E +
Sbjct: 199 ADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 122/282 (43%), Gaps = 51/282 (18%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL-------------F 57
EF NE ++ + ++VRL G + ++I E M L +L
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 133
Query: 58 DPTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGI 117
P+ + + +++ +A G+ YL+ + +HRDL A N ++ + KI DFG+
Sbjct: 134 PPSLSKM------IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGM 184
Query: 118 AR-LFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE--TLSSKKNAH 174
R ++ D + K ++ +MSPE G+F+ SDV+SFGV++ E TL+ +
Sbjct: 185 TRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 243
Query: 175 FYNTDSLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTM 234
N L + + +L + P + + +C Q N RP+
Sbjct: 244 LSNEQVLRFV--------------MEGGLLDKPDNCP--DMLFELMRMCWQYNPKMRPSF 287
Query: 235 LEVISMLTNENVILPSPLQPAFSHVRI--AENSSLPANCEVE 274
LE+IS + E ++P F V +E + LP E++
Sbjct: 288 LEIISSIKEE-------MEPGFREVSFYYSEENKLPEPEELD 322
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 112/255 (43%), Gaps = 44/255 (17%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL--FDP-TKTGLLGW 67
+F+ E L+A+ + N+V+L G C L++EYM L+ FL P T L
Sbjct: 96 DFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHS 155
Query: 68 EMRVR------------------ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMN 109
++ R I VA G+ YL S + +HRDL N L+ NM
Sbjct: 156 DLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMV 212
Query: 110 PKISDFGIAR-LFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
KI+DFG++R ++ D +++ + +M PE ++ +SDV+++GV++ E S
Sbjct: 213 VKIADFGLSRNIYSADYYKADGNDAIPI-RWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
Query: 169 SKKNAHFYNTDSLTLLGHAWNLW--NDGRAWELMDSILQNDASYPMLNRYINVALLCVQE 226
Y + H ++ DG +IL + P+ N+ LC +
Sbjct: 272 -------YGLQPYYGMAHEEVIYYVRDG-------NILACPENCPL--ELYNLMRLCWSK 315
Query: 227 NAADRPTMLEVISML 241
ADRP+ + +L
Sbjct: 316 LPADRPSFCSIHRIL 330
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 18/169 (10%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFD----PTKTGLLG 66
+F E ++I+KL H+N+VR G ++ + ++ E M L FL + P++ L
Sbjct: 94 DFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 153
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILL---DSNMNPKISDFGIARLFGG 123
+ + +A G YL IHRD+ A N LL KI DFG+AR
Sbjct: 154 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR---- 206
Query: 124 DELQSNTKRIVG----TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
D +++ R G +M PE + G+F+ K+D +SFGVL+ E S
Sbjct: 207 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 91/189 (48%), Gaps = 28/189 (14%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTG----- 63
L + +E ++ ++ H ++++L+G C + G +LI EY SL FL + K G
Sbjct: 70 LRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLG 129
Query: 64 ----------------LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSN 107
L + ++QG+ YL + ++++HRDL A NIL+
Sbjct: 130 SGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEG 186
Query: 108 MNPKISDFGIARLFGGDELQSNTKRIVG--TYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
KISDFG++R E S KR G +M+ E +++ +SDV+SFGVL+ E
Sbjct: 187 RKMKISDFGLSRDV--YEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE 244
Query: 166 TLSSKKNAH 174
++ N +
Sbjct: 245 IVTLGGNPY 253
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 13/172 (7%)
Query: 1 LSSQSG-QGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCFLFD 58
+ +SG Q + + M+ I L H ++VRL G C G + L+ +Y+P SL D
Sbjct: 68 IEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLC--PGSSLQLVTQYLPLGSL----LD 121
Query: 59 PTKT--GLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFG 116
+ G LG ++ + +A+G+ YL + ++HR+L A N+LL S +++DFG
Sbjct: 122 HVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFG 178
Query: 117 IARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+A L D+ Q +M+ E G ++ +SDV+S+GV V E ++
Sbjct: 179 VADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 13/172 (7%)
Query: 1 LSSQSG-QGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCFLFD 58
+ +SG Q + + M+ I L H ++VRL G C G + L+ +Y+P SL D
Sbjct: 50 IEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLC--PGSSLQLVTQYLPLGSL----LD 103
Query: 59 PTKT--GLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFG 116
+ G LG ++ + +A+G+ YL + ++HR+L A N+LL S +++DFG
Sbjct: 104 HVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFG 160
Query: 117 IARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+A L D+ Q +M+ E G ++ +SDV+S+GV V E ++
Sbjct: 161 VADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 79/151 (52%), Gaps = 9/151 (5%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRIL 74
E+ ++ + +V +G GE + E+M SLD L K G + ++ ++
Sbjct: 57 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVS 113
Query: 75 EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIV 134
V +GL YL + +++HRD+K SNIL++S K+ DFG++ G + V
Sbjct: 114 IAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDEMANEFV 167
Query: 135 GTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
GT YMSPE +S++SD++S G+ ++E
Sbjct: 168 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 198
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 88/174 (50%), Gaps = 24/174 (13%)
Query: 11 EFKNEMMLIAKL-QHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL-------FDP--- 59
+F E+ ++ KL H N++ L G C G L EY P+ +L FL DP
Sbjct: 61 DFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFA 120
Query: 60 ---TKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFG 116
+ L + + VA+G+ YL S+ + IHRDL A NIL+ N KI+DFG
Sbjct: 121 IANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFG 177
Query: 117 IARLFGGDELQSNTKRIVG--TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
++R G E+ K+ +G +M+ E +++ SDV+S+GVL+ E +S
Sbjct: 178 LSR---GQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 88/174 (50%), Gaps = 24/174 (13%)
Query: 11 EFKNEMMLIAKL-QHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL-------FDP--- 59
+F E+ ++ KL H N++ L G C G L EY P+ +L FL DP
Sbjct: 71 DFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFA 130
Query: 60 ---TKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFG 116
+ L + + VA+G+ YL S+ + IHRDL A NIL+ N KI+DFG
Sbjct: 131 IANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFG 187
Query: 117 IARLFGGDELQSNTKRIVG--TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
++R G E+ K+ +G +M+ E +++ SDV+S+GVL+ E +S
Sbjct: 188 LSR---GQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 91/165 (55%), Gaps = 16/165 (9%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCFLF--DPTKTGLL 65
+E F E ++ LQH LV+L + E I +I E+M SL FL + +K L
Sbjct: 54 VEAFLAEANVMKTLQHDKLVKLHAVVTK--EPIYIITEFMAKGSLLDFLKSDEGSKQPL- 110
Query: 66 GWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDE 125
+ +A+G+ ++ + IHRDL+A+NIL+ +++ KI+DFG+AR+ +E
Sbjct: 111 --PKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNE 165
Query: 126 LQSNTKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
T R + + +PE G F+IKSDV+SFG+L++E ++
Sbjct: 166 Y---TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 207
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 97/184 (52%), Gaps = 16/184 (8%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT 60
+ ++S + LE++ E+ ++A H +V+L G G+ ++ E+ P ++D + +
Sbjct: 44 IETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELD 103
Query: 61 KTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARL 120
+ GL +++V + + + L +LH R+IHRDLKA N+L+ + +++DFG++
Sbjct: 104 R-GLTEPQIQV-VCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVS-- 156
Query: 121 FGGDELQSNTKR--IVGTYGYMSPEYAL-----RGLFSIKSDVFSFGVLVLETLSSKKNA 173
L++ KR +GT +M+PE + + K+D++S G+ ++E +
Sbjct: 157 --AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPH 214
Query: 174 HFYN 177
H N
Sbjct: 215 HELN 218
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 108/255 (42%), Gaps = 42/255 (16%)
Query: 10 EEFKNEMMLIAKL-QHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGL---- 64
E +E+ +++ L QH N+V L G C G ++I EY L FL GL
Sbjct: 94 EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSY 153
Query: 65 ---------LGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDF 115
L + VAQG+ +L + IHRD+ A N+LL + KI DF
Sbjct: 154 NPSHNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDF 210
Query: 116 GIARLFGGDE---LQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKN 172
G+AR D ++ N + V +M+PE +++++SDV+S+G+L+ E S N
Sbjct: 211 GLARDIMNDSNYIVKGNARLPV---KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN 267
Query: 173 AH---FYNTDSLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAA 229
+ N+ L+ + + A + + SI+Q C
Sbjct: 268 PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQ----------------ACWALEPT 311
Query: 230 DRPTMLEVISMLTNE 244
RPT ++ S L +
Sbjct: 312 HRPTFQQICSFLQEQ 326
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFD----PTKTGLLG 66
+F E ++I+K H+N+VR G ++ + ++ E M L FL + P++ L
Sbjct: 80 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 139
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLD---SNMNPKISDFGIARLFGG 123
+ + +A G YL IHRD+ A N LL KI DFG+AR
Sbjct: 140 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR---- 192
Query: 124 DELQSNTKRIVG----TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
D +++ R G +M PE + G+F+ K+D +SFGVL+ E S
Sbjct: 193 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFD----PTKTGLLG 66
+F E ++I+K H+N+VR G ++ + ++ E M L FL + P++ L
Sbjct: 71 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 130
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILL---DSNMNPKISDFGIARLFGG 123
+ + +A G YL IHRD+ A N LL KI DFG+AR
Sbjct: 131 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR---- 183
Query: 124 DELQSNTKRIVG----TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
D +++ R G +M PE + G+F+ K+D +SFGVL+ E S
Sbjct: 184 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 10/160 (6%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEH-GEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
+ F E ++ +L+H NLV+L G +E G ++ EYM SL +L ++ +LG +
Sbjct: 50 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGD 108
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
++ V + + YL + +HRDL A N+L+ + K+SDFG+ + E S
Sbjct: 109 CLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASS 160
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+ +PE FS KSDV+SFG+L+ E S
Sbjct: 161 TQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYS 200
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 9/163 (5%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E K E+ + A L H N+V+ +G E + L EY L FD + + E
Sbjct: 50 ENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 105
Query: 70 RV-RILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
R + G++YLH + + HRD+K N+LLD N KISDFG+A +F + +
Sbjct: 106 DAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
++ GT Y++PE R F + DV+S G+++ L+ +
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFD----PTKTGLLG 66
+F E ++I+K H+N+VR G ++ + ++ E M L FL + P++ L
Sbjct: 79 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLA 138
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILL---DSNMNPKISDFGIARLFGG 123
+ + +A G YL IHRD+ A N LL KI DFG+AR
Sbjct: 139 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR---- 191
Query: 124 DELQSNTKRIVG----TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
D +++ R G +M PE + G+F+ K+D +SFGVL+ E S
Sbjct: 192 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFD----PTKTGLLG 66
+F E ++I+K H+N+VR G ++ + ++ E M L FL + P++ L
Sbjct: 79 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 138
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILL---DSNMNPKISDFGIARLFGG 123
+ + +A G YL IHRD+ A N LL KI DFG+AR
Sbjct: 139 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR---- 191
Query: 124 DELQSNTKRIVG----TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
D +++ R G +M PE + G+F+ K+D +SFGVL+ E S
Sbjct: 192 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFD----PTKTGLLG 66
+F E ++I+K H+N+VR G ++ + ++ E M L FL + P++ L
Sbjct: 94 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLA 153
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILL---DSNMNPKISDFGIARLFGG 123
+ + +A G YL IHRD+ A N LL KI DFG+AR
Sbjct: 154 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR---- 206
Query: 124 DELQSNTKRIVG----TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
D +++ R G +M PE + G+F+ K+D +SFGVL+ E S
Sbjct: 207 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 89/168 (52%), Gaps = 14/168 (8%)
Query: 5 SGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSL-DCFLFDPTKTG 63
S + +E +E ++A + + RL G C+ + L+ + MP L D + + G
Sbjct: 59 SPKANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLG 117
Query: 64 ---LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARL 120
LL W M++ A+G+ YL +R++HRDL A N+L+ S + KI+DFG+ARL
Sbjct: 118 SQDLLNWCMQI------AKGMSYLED---VRLVHRDLAARNVLVKSPNHVKITDFGLARL 168
Query: 121 FGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
DE + + +M+ E LR F+ +SDV+S+GV V E ++
Sbjct: 169 LDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 90/189 (47%), Gaps = 28/189 (14%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTG----- 63
L + +E ++ ++ H ++++L+G C + G +LI EY SL FL + K G
Sbjct: 70 LRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLG 129
Query: 64 ----------------LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSN 107
L + ++QG+ YL + + ++HRDL A NIL+
Sbjct: 130 SGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEG 186
Query: 108 MNPKISDFGIARLFGGDELQSNTKRIVG--TYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
KISDFG++R E S KR G +M+ E +++ +SDV+SFGVL+ E
Sbjct: 187 RKMKISDFGLSRDVY--EEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE 244
Query: 166 TLSSKKNAH 174
++ N +
Sbjct: 245 IVTLGGNPY 253
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 97/184 (52%), Gaps = 16/184 (8%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT 60
+ ++S + LE++ E+ ++A H +V+L G G+ ++ E+ P ++D + +
Sbjct: 52 IETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELD 111
Query: 61 KTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARL 120
+ GL +++V + + + L +LH R+IHRDLKA N+L+ + +++DFG++
Sbjct: 112 R-GLTEPQIQV-VCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVS-- 164
Query: 121 FGGDELQSNTKR--IVGTYGYMSPEYAL-----RGLFSIKSDVFSFGVLVLETLSSKKNA 173
L++ KR +GT +M+PE + + K+D++S G+ ++E +
Sbjct: 165 --AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPH 222
Query: 174 HFYN 177
H N
Sbjct: 223 HELN 226
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 84/171 (49%), Gaps = 22/171 (12%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFD----PTKTGLLG 66
+F E ++I+K H+N+VR G ++ + ++ E M L FL + P++ L
Sbjct: 86 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 145
Query: 67 WEMRVRILEGVAQGLLYL--HHYSRLRVIHRDLKASNILLD---SNMNPKISDFGIARLF 121
+ + +A G YL +H+ IHRD+ A N LL KI DFG+AR
Sbjct: 146 MLDLLHVARDIACGCQYLEENHF-----IHRDIAARNCLLTCPGPGRVAKIGDFGMAR-- 198
Query: 122 GGDELQSNTKRIVG----TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
D +++ R G +M PE + G+F+ K+D +SFGVL+ E S
Sbjct: 199 --DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 119/260 (45%), Gaps = 39/260 (15%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLF--------DPTKT 62
EF NE ++ ++VRL G + +++ E M + L +L +P +
Sbjct: 67 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 126
Query: 63 GLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIAR-LF 121
EM +++ +A G+ YL+ + +HR+L A N ++ + KI DFG+ R ++
Sbjct: 127 PPTLQEM-IQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIY 182
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE--TLSSKKNAHFYNTD 179
D + K ++ +M+PE G+F+ SD++SFGV++ E +L+ + N
Sbjct: 183 ETDYYRKGGKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 241
Query: 180 SLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVIS 239
L + DG + D+ + R ++ +C Q N RPT LE+++
Sbjct: 242 VLKFV-------MDGGYLDQPDNCPE---------RVTDLMRMCWQFNPNMRPTFLEIVN 285
Query: 240 MLTNENVILPSPLQPAFSHV 259
+L ++ L P+F V
Sbjct: 286 LLKDD-------LHPSFPEV 298
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 108/253 (42%), Gaps = 40/253 (15%)
Query: 10 EEFKNEMMLIAKL-QHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL--------FDPT 60
E +E+ +++ L QH N+V L G C G ++I EY L FL DP
Sbjct: 94 EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPA 153
Query: 61 ---KTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGI 117
L + VAQG+ +L + IHRD+ A N+LL + KI DFG+
Sbjct: 154 FAIANSTLSTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGL 210
Query: 118 ARLFGGDE---LQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAH 174
AR D ++ N + V +M+PE +++++SDV+S+G+L+ E S N +
Sbjct: 211 ARDIMNDSNYIVKGNARLPV---KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
Query: 175 ---FYNTDSLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADR 231
N+ L+ + + A + + SI+Q C R
Sbjct: 268 PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQ----------------ACWALEPTHR 311
Query: 232 PTMLEVISMLTNE 244
PT ++ S L +
Sbjct: 312 PTFQQICSFLQEQ 324
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 119/260 (45%), Gaps = 39/260 (15%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLF--------DPTKT 62
EF NE ++ ++VRL G + +++ E M + L +L +P +
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 63 GLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIAR-LF 121
EM +++ +A G+ YL+ + +HR+L A N ++ + KI DFG+ R ++
Sbjct: 126 PPTLQEM-IQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIY 181
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE--TLSSKKNAHFYNTD 179
D + K ++ +M+PE G+F+ SD++SFGV++ E +L+ + N
Sbjct: 182 ETDYYRKGGKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 240
Query: 180 SLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVIS 239
L + DG + D+ + R ++ +C Q N RPT LE+++
Sbjct: 241 VLKFV-------MDGGYLDQPDNCPE---------RVTDLMRMCWQFNPNMRPTFLEIVN 284
Query: 240 MLTNENVILPSPLQPAFSHV 259
+L ++ L P+F V
Sbjct: 285 LLKDD-------LHPSFPEV 297
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFD----PTKTGLLG 66
+F E ++I+K H+N+VR G ++ + ++ E M L FL + P++ L
Sbjct: 96 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 155
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLD---SNMNPKISDFGIARLFGG 123
+ + +A G YL IHRD+ A N LL KI DFG+AR
Sbjct: 156 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR---- 208
Query: 124 DELQSNTKRIVG----TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
D +++ R G +M PE + G+F+ K+D +SFGVL+ E S
Sbjct: 209 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 114/259 (44%), Gaps = 37/259 (14%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLF--------DPTKT 62
EF NE ++ ++VRL G + +++ E M + L +L +P +
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 63 GLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG 122
EM +++ +A G+ YL+ + +HRDL A N ++ + KI DFG+ R
Sbjct: 126 PPTLQEM-IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIY 181
Query: 123 GDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE--TLSSKKNAHFYNTDS 180
+ + +M+PE G+F+ SD++SFGV++ E +L+ + N
Sbjct: 182 ETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV 241
Query: 181 LTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISM 240
L + DG + D+ + R ++ +C Q N RPT LE++++
Sbjct: 242 LKFV-------MDGGYLDQPDNCPE---------RVTDLMRMCWQFNPKMRPTFLEIVNL 285
Query: 241 LTNENVILPSPLQPAFSHV 259
L ++ L P+F V
Sbjct: 286 LKDD-------LHPSFPEV 297
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 91/165 (55%), Gaps = 16/165 (9%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCFLF--DPTKTGLL 65
+E F E ++ LQH LV+L + E I +I E+M SL FL + +K L
Sbjct: 227 VEAFLAEANVMKTLQHDKLVKLHAVVTK--EPIYIITEFMAKGSLLDFLKSDEGSKQPL- 283
Query: 66 GWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDE 125
+ +A+G+ ++ + IHRDL+A+NIL+ +++ KI+DFG+AR+ +E
Sbjct: 284 --PKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNE 338
Query: 126 LQSNTKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
T R + + +PE G F+IKSDV+SFG+L++E ++
Sbjct: 339 Y---TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 380
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 111/264 (42%), Gaps = 47/264 (17%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFD------------ 58
EF NE ++ + ++VRL G + ++I E M L +L
Sbjct: 59 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 118
Query: 59 -PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGI 117
P+ + + +++ +A G+ YL+ + +HRDL A N ++ + KI DFG+
Sbjct: 119 PPSLSKM------IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGM 169
Query: 118 ARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE--TLSSKKNAHF 175
R + + + +MSPE G+F+ SDV+SFGV++ E TL+ +
Sbjct: 170 TRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 229
Query: 176 YNTDSLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTML 235
N L + + +L + P + + + +C Q N RP+ L
Sbjct: 230 SNEQVLRFV--------------MEGGLLDKPDNCP--DMLLELMRMCWQYNPKMRPSFL 273
Query: 236 EVISMLTNENVILPSPLQPAFSHV 259
E+IS + E ++P F V
Sbjct: 274 EIISSIKEE-------MEPGFREV 290
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 7/154 (4%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
++ +NE+ + +L+H +++ L+ + L+ E N ++ +L + K
Sbjct: 55 VQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKP--FSEN 112
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
+ + G+LYLH + ++HRDL SN+LL NMN KI+DFG+A +
Sbjct: 113 EARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKH 169
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVL 162
T + GT Y+SPE A R ++SDV+S G +
Sbjct: 170 YT--LCGTPNYISPEIATRSAHGLESDVWSLGCM 201
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 114/265 (43%), Gaps = 49/265 (18%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFD------------ 58
EF NE ++ + ++VRL G + ++I E M L +L
Sbjct: 64 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 123
Query: 59 -PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGI 117
P+ + + +++ +A G+ YL+ + +HRDL A N ++ + KI DFG+
Sbjct: 124 PPSLSKM------IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGM 174
Query: 118 AR-LFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE--TLSSKKNAH 174
R ++ D + K ++ +MSPE G+F+ SDV+SFGV++ E TL+ +
Sbjct: 175 TRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 233
Query: 175 FYNTDSLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTM 234
N L + + +L + P + + +C Q N RP+
Sbjct: 234 LSNEQVLRFV--------------MEGGLLDKPDNCP--DMLFELMRMCWQYNPKMRPSF 277
Query: 235 LEVISMLTNENVILPSPLQPAFSHV 259
LE+IS + E ++P F V
Sbjct: 278 LEIISSIKEE-------MEPGFREV 295
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFD----PTKTGLLG 66
+F E ++I+K H+N+VR G ++ + ++ E M L FL + P++ L
Sbjct: 94 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 153
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILL---DSNMNPKISDFGIARLFGG 123
+ + +A G YL IHRD+ A N LL KI DFG+AR
Sbjct: 154 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR---- 206
Query: 124 DELQSNTKRIVG----TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
D +++ R G +M PE + G+F+ K+D +SFGVL+ E S
Sbjct: 207 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 114/265 (43%), Gaps = 49/265 (18%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFD------------ 58
EF NE ++ + ++VRL G + ++I E M L +L
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 59 -PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGI 117
P+ + + +++ +A G+ YL+ + +HRDL A N ++ + KI DFG+
Sbjct: 121 PPSLSKM------IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGM 171
Query: 118 AR-LFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE--TLSSKKNAH 174
R ++ D + K ++ +MSPE G+F+ SDV+SFGV++ E TL+ +
Sbjct: 172 TRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 230
Query: 175 FYNTDSLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTM 234
N L + + +L + P + + +C Q N RP+
Sbjct: 231 LSNEQVLRFV--------------MEGGLLDKPDNCP--DMLFELMRMCWQYNPKMRPSF 274
Query: 235 LEVISMLTNENVILPSPLQPAFSHV 259
LE+IS + E ++P F V
Sbjct: 275 LEIISSIKEE-------MEPGFREV 292
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 84/171 (49%), Gaps = 22/171 (12%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFD----PTKTGLLG 66
+F E ++I+K H+N+VR G ++ + ++ E M L FL + P++ L
Sbjct: 106 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 165
Query: 67 WEMRVRILEGVAQGLLYL--HHYSRLRVIHRDLKASNILLD---SNMNPKISDFGIARLF 121
+ + +A G YL +H+ IHRD+ A N LL KI DFG+AR
Sbjct: 166 MLDLLHVARDIACGCQYLEENHF-----IHRDIAARNCLLTCPGPGRVAKIGDFGMAR-- 218
Query: 122 GGDELQSNTKRIVG----TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
D +++ R G +M PE + G+F+ K+D +SFGVL+ E S
Sbjct: 219 --DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 80/169 (47%), Gaps = 18/169 (10%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFD----PTKTGLLG 66
+F E ++I+K H+N+VR G ++ + ++ E M L FL + P++ L
Sbjct: 120 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 179
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLD---SNMNPKISDFGIARLFGG 123
+ + +A G YL IHRD+ A N LL KI DFG+AR
Sbjct: 180 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR---- 232
Query: 124 DELQSNTKRIVG----TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
D ++ R G +M PE + G+F+ K+D +SFGVL+ E S
Sbjct: 233 DIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 80/169 (47%), Gaps = 18/169 (10%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFD----PTKTGLLG 66
+F E ++I+K H+N+VR G ++ + ++ E M L FL + P++ L
Sbjct: 97 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 156
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILL---DSNMNPKISDFGIARLFGG 123
+ + +A G YL IHRD+ A N LL KI DFG+AR
Sbjct: 157 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR---- 209
Query: 124 DELQSNTKRIVG----TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
D ++ R G +M PE + G+F+ K+D +SFGVL+ E S
Sbjct: 210 DIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 114/265 (43%), Gaps = 49/265 (18%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFD------------ 58
EF NE ++ + ++VRL G + ++I E M L +L
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 59 -PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGI 117
P+ + + +++ +A G+ YL+ + +HRDL A N ++ + KI DFG+
Sbjct: 128 PPSLSKM------IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGM 178
Query: 118 AR-LFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE--TLSSKKNAH 174
R ++ D + K ++ +MSPE G+F+ SDV+SFGV++ E TL+ +
Sbjct: 179 TRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 237
Query: 175 FYNTDSLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTM 234
N L + + +L + P + + +C Q N RP+
Sbjct: 238 LSNEQVLRFV--------------MEGGLLDKPDNCP--DMLFELMRMCWQYNPKMRPSF 281
Query: 235 LEVISMLTNENVILPSPLQPAFSHV 259
LE+IS + E ++P F V
Sbjct: 282 LEIISSIKEE-------MEPGFREV 299
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 114/265 (43%), Gaps = 49/265 (18%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFD------------ 58
EF NE ++ + ++VRL G + ++I E M L +L
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 59 -PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGI 117
P+ + + +++ +A G+ YL+ + +HRDL A N ++ + KI DFG+
Sbjct: 127 PPSLSKM------IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGM 177
Query: 118 AR-LFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE--TLSSKKNAH 174
R ++ D + K ++ +MSPE G+F+ SDV+SFGV++ E TL+ +
Sbjct: 178 TRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 236
Query: 175 FYNTDSLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTM 234
N L + + +L + P + + +C Q N RP+
Sbjct: 237 LSNEQVLRFV--------------MEGGLLDKPDNCP--DMLFELMRMCWQYNPKMRPSF 280
Query: 235 LEVISMLTNENVILPSPLQPAFSHV 259
LE+IS + E ++P F V
Sbjct: 281 LEIISSIKEE-------MEPGFREV 298
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 83/154 (53%), Gaps = 11/154 (7%)
Query: 13 KNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKS-LDCFLFDPTKTGLLGWEMRV 71
+ E+ ++++ + + +G ++ + +I EY+ S LD L +P G L
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD--LLEP---GPLDETQIA 107
Query: 72 RILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTK 131
IL + +GL YLH + IHRD+KA+N+LL + K++DFG+A +++ NT
Sbjct: 108 TILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT- 163
Query: 132 RIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
VGT +M+PE + + K+D++S G+ +E
Sbjct: 164 -FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIE 196
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 17/181 (9%)
Query: 2 SSQSGQGLEEFKNEMMLIAKL-QHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT 60
S + + L + +EM ++ + +H+N++ L G C + G +I EY +L +L
Sbjct: 55 SDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR 114
Query: 61 KTGL-------------LGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSN 107
GL L + V VA+G+ YL + + IHRDL A N+L+ +
Sbjct: 115 PPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTED 171
Query: 108 MNPKISDFGIARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETL 167
KI+DFG+AR + T +M+PE +++ +SDV+SFGVL+ E
Sbjct: 172 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 231
Query: 168 S 168
+
Sbjct: 232 T 232
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 89/181 (49%), Gaps = 17/181 (9%)
Query: 2 SSQSGQGLEEFKNEMMLIAKL-QHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL---- 56
S + + L + +EM ++ + +H+N++ L G C + G +I EY +L +L
Sbjct: 70 SDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR 129
Query: 57 -------FDPTKTG--LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSN 107
F+P+ L + V VA+G+ YL + + IHRDL A N+L+ +
Sbjct: 130 PPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTED 186
Query: 108 MNPKISDFGIARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETL 167
KI+DFG+AR + T +M+PE +++ +SDV+SFGVL+ E
Sbjct: 187 NVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 246
Query: 168 S 168
+
Sbjct: 247 T 247
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 114/265 (43%), Gaps = 49/265 (18%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFD------------ 58
EF NE ++ + ++VRL G + ++I E M L +L
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 59 -PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGI 117
P+ + + +++ +A G+ YL+ + +HRDL A N ++ + KI DFG+
Sbjct: 125 PPSLSKM------IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGM 175
Query: 118 AR-LFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE--TLSSKKNAH 174
R ++ D + K ++ +MSPE G+F+ SDV+SFGV++ E TL+ +
Sbjct: 176 TRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 234
Query: 175 FYNTDSLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTM 234
N L + + +L + P + + +C Q N RP+
Sbjct: 235 LSNEQVLRFV--------------MEGGLLDKPDNCP--DMLFELMRMCWQYNPKMRPSF 278
Query: 235 LEVISMLTNENVILPSPLQPAFSHV 259
LE+IS + E ++P F V
Sbjct: 279 LEIISSIKEE-------MEPGFREV 296
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 114/265 (43%), Gaps = 49/265 (18%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFD------------ 58
EF NE ++ + ++VRL G + ++I E M L +L
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 59 -PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGI 117
P+ + + +++ +A G+ YL+ + +HRDL A N ++ + KI DFG+
Sbjct: 127 PPSLSKM------IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGM 177
Query: 118 AR-LFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE--TLSSKKNAH 174
R ++ D + K ++ +MSPE G+F+ SDV+SFGV++ E TL+ +
Sbjct: 178 TRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 236
Query: 175 FYNTDSLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTM 234
N L + + +L + P + + +C Q N RP+
Sbjct: 237 LSNEQVLRFV--------------MEGGLLDKPDNCP--DMLFELMRMCWQYNPKMRPSF 280
Query: 235 LEVISMLTNENVILPSPLQPAFSHV 259
LE+IS + E ++P F V
Sbjct: 281 LEIISSIKEE-------MEPGFREV 298
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 86/176 (48%), Gaps = 17/176 (9%)
Query: 7 QGLEEFKNEMMLIAKL-QHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGL- 64
+ L + +EM ++ + +H+N++ L G C + G +I EY +L +L G+
Sbjct: 82 KDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 65 ------------LGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKI 112
+ ++ V +A+G+ YL + + IHRDL A N+L+ N KI
Sbjct: 142 XSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKI 198
Query: 113 SDFGIARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+DFG+AR + T +M+PE +++ +SDV+SFGVL+ E +
Sbjct: 199 ADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 94/174 (54%), Gaps = 11/174 (6%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL-FDP 59
+++ + Q L+ FKNE+ ++ K +H N++ G + + ++ ++ SL L
Sbjct: 42 VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIE 100
Query: 60 TKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIAR 119
TK ++ + I AQG+ YLH S +IHRDLK++NI L ++ KI DFG+A
Sbjct: 101 TKFEMIKL---IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLAT 154
Query: 120 LFGGDELQSNTKRIVGTYGYMSPEYAL---RGLFSIKSDVFSFGVLVLETLSSK 170
+ +++ G+ +M+PE + +S +SDV++FG+++ E ++ +
Sbjct: 155 VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 94/174 (54%), Gaps = 11/174 (6%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL-FDP 59
+++ + Q L+ FKNE+ ++ K +H N++ G + + ++ ++ SL L
Sbjct: 40 VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIE 98
Query: 60 TKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIAR 119
TK ++ + I AQG+ YLH S +IHRDLK++NI L ++ KI DFG+A
Sbjct: 99 TKFEMIKL---IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLAT 152
Query: 120 LFGGDELQSNTKRIVGTYGYMSPEYAL---RGLFSIKSDVFSFGVLVLETLSSK 170
+ +++ G+ +M+PE + +S +SDV++FG+++ E ++ +
Sbjct: 153 VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 90/162 (55%), Gaps = 19/162 (11%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEK--ILIYEYMPNKSLDCFLFDPTKTGLLGWEMRV- 71
E+ L+ +L H N+V L H E+ L++E+M K L L D KTGL ++++
Sbjct: 69 EISLLKELHHPNIVSLIDVI--HSERCLTLVFEFM-EKDLKKVL-DENKTGLQDSQIKIY 124
Query: 72 --RILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN 129
++L GVA H + R++HRDLK N+L++S+ K++DFG+AR F G ++S
Sbjct: 125 LYQLLRGVA-------HCHQHRILHRDLKPQNLLINSDGALKLADFGLARAF-GIPVRSY 176
Query: 130 TKRIVGTYGYMSPEYAL-RGLFSIKSDVFSFGVLVLETLSSK 170
T +V T Y +P+ + +S D++S G + E ++ K
Sbjct: 177 THEVV-TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 10/160 (6%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEH-GEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
+ F E ++ +L+H NLV+L G +E G ++ EYM SL +L ++ +LG +
Sbjct: 59 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGD 117
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
++ V + + YL + +HRDL A N+L+ + K+SDFG+ + E S
Sbjct: 118 CLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASS 169
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+ +PE FS KSDV+SFG+L+ E S
Sbjct: 170 TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 17/181 (9%)
Query: 2 SSQSGQGLEEFKNEMMLIAKL-QHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT 60
S + + L + +EM ++ + +H+N++ L G C + G +I EY +L +L
Sbjct: 63 SDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR 122
Query: 61 KTGL-------------LGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSN 107
GL L + V VA+G+ YL + + IHRDL A N+L+ +
Sbjct: 123 PPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTED 179
Query: 108 MNPKISDFGIARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETL 167
KI+DFG+AR + T +M+PE +++ +SDV+SFGVL+ E
Sbjct: 180 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 239
Query: 168 S 168
+
Sbjct: 240 T 240
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 17/181 (9%)
Query: 2 SSQSGQGLEEFKNEMMLIAKL-QHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT 60
S + + L + +EM ++ + +H+N++ L G C + G +I EY +L +L
Sbjct: 70 SDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARE 129
Query: 61 KTGL-------------LGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSN 107
GL L + V VA+G+ YL + + IHRDL A N+L+ +
Sbjct: 130 PPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTED 186
Query: 108 MNPKISDFGIARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETL 167
KI+DFG+AR + T +M+PE +++ +SDV+SFGVL+ E
Sbjct: 187 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 246
Query: 168 S 168
+
Sbjct: 247 T 247
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 90/162 (55%), Gaps = 19/162 (11%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEK--ILIYEYMPNKSLDCFLFDPTKTGLLGWEMRV- 71
E+ L+ +L H N+V L H E+ L++E+M K L L D KTGL ++++
Sbjct: 69 EISLLKELHHPNIVSLIDVI--HSERCLTLVFEFM-EKDLKKVL-DENKTGLQDSQIKIY 124
Query: 72 --RILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN 129
++L GVA H + R++HRDLK N+L++S+ K++DFG+AR F G ++S
Sbjct: 125 LYQLLRGVA-------HCHQHRILHRDLKPQNLLINSDGALKLADFGLARAF-GIPVRSY 176
Query: 130 TKRIVGTYGYMSPEYAL-RGLFSIKSDVFSFGVLVLETLSSK 170
T +V T Y +P+ + +S D++S G + E ++ K
Sbjct: 177 THEVV-TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 83/154 (53%), Gaps = 11/154 (7%)
Query: 13 KNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKS-LDCFLFDPTKTGLLGWEMRV 71
+ E+ ++++ + + +G ++ + +I EY+ S LD L +P G L
Sbjct: 73 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD--LLEP---GPLDETQIA 127
Query: 72 RILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTK 131
IL + +GL YLH + IHRD+KA+N+LL + K++DFG+A +++ NT
Sbjct: 128 TILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT- 183
Query: 132 RIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
VGT +M+PE + + K+D++S G+ +E
Sbjct: 184 -FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIE 216
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 86/176 (48%), Gaps = 17/176 (9%)
Query: 7 QGLEEFKNEMMLIAKL-QHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGL- 64
+ L + +EM ++ + +H+N++ L G C + G +I EY +L +L G+
Sbjct: 128 KDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGME 187
Query: 65 ------------LGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKI 112
+ ++ V +A+G+ YL + + IHRDL A N+L+ N KI
Sbjct: 188 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKI 244
Query: 113 SDFGIARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+DFG+AR + T +M+PE +++ +SDV+SFGVL+ E +
Sbjct: 245 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 17/181 (9%)
Query: 2 SSQSGQGLEEFKNEMMLIAKL-QHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT 60
S + + L + +EM ++ + +H+N++ L G C + G +I EY +L +L
Sbjct: 59 SDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR 118
Query: 61 KTGL-------------LGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSN 107
GL L + V VA+G+ YL + + IHRDL A N+L+ +
Sbjct: 119 PPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTED 175
Query: 108 MNPKISDFGIARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETL 167
KI+DFG+AR + T +M+PE +++ +SDV+SFGVL+ E
Sbjct: 176 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 235
Query: 168 S 168
+
Sbjct: 236 T 236
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 86/176 (48%), Gaps = 17/176 (9%)
Query: 7 QGLEEFKNEMMLIAKL-QHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGL- 64
+ L + +EM ++ + +H+N++ L G C + G +I EY +L +L G+
Sbjct: 82 KDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 65 ------------LGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKI 112
+ ++ V +A+G+ YL + + IHRDL A N+L+ N KI
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKI 198
Query: 113 SDFGIARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+DFG+AR + T +M+PE +++ +SDV+SFGVL+ E +
Sbjct: 199 ADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 17/181 (9%)
Query: 2 SSQSGQGLEEFKNEMMLIAKL-QHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT 60
S + + L + +EM ++ + +H+N++ L G C + G +I EY +L +L
Sbjct: 70 SDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR 129
Query: 61 KTGL-------------LGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSN 107
GL L + V VA+G+ YL + + IHRDL A N+L+ +
Sbjct: 130 PPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTED 186
Query: 108 MNPKISDFGIARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETL 167
KI+DFG+AR + T +M+PE +++ +SDV+SFGVL+ E
Sbjct: 187 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 246
Query: 168 S 168
+
Sbjct: 247 T 247
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 94/174 (54%), Gaps = 11/174 (6%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL-FDP 59
+++ + Q L+ FKNE+ ++ K +H N++ G + + ++ ++ SL L
Sbjct: 45 VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIE 103
Query: 60 TKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIAR 119
TK ++ + I AQG+ YLH S +IHRDLK++NI L ++ KI DFG+A
Sbjct: 104 TKFEMIKL---IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLAT 157
Query: 120 LFGGDELQSNTKRIVGTYGYMSPEYAL---RGLFSIKSDVFSFGVLVLETLSSK 170
+ +++ G+ +M+PE + +S +SDV++FG+++ E ++ +
Sbjct: 158 VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 17/181 (9%)
Query: 2 SSQSGQGLEEFKNEMMLIAKL-QHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT 60
S + + L + +EM ++ + +H+N++ L G C + G +I EY +L +L
Sbjct: 62 SDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR 121
Query: 61 KTGL-------------LGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSN 107
GL L + V VA+G+ YL + + IHRDL A N+L+ +
Sbjct: 122 PPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTED 178
Query: 108 MNPKISDFGIARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETL 167
KI+DFG+AR + T +M+PE +++ +SDV+SFGVL+ E
Sbjct: 179 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 238
Query: 168 S 168
+
Sbjct: 239 T 239
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 94/174 (54%), Gaps = 11/174 (6%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL-FDP 59
+++ + Q L+ FKNE+ ++ K +H N++ G + + ++ ++ SL L
Sbjct: 67 VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIE 125
Query: 60 TKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIAR 119
TK ++ + I AQG+ YLH S +IHRDLK++NI L ++ KI DFG+A
Sbjct: 126 TKFEMIKL---IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLAT 179
Query: 120 LFGGDELQSNTKRIVGTYGYMSPEYAL---RGLFSIKSDVFSFGVLVLETLSSK 170
+ +++ G+ +M+PE + +S +SDV++FG+++ E ++ +
Sbjct: 180 VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 17/181 (9%)
Query: 2 SSQSGQGLEEFKNEMMLIAKL-QHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT 60
S + + L + +EM ++ + +H+N++ L G C + G +I EY +L +L
Sbjct: 70 SDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR 129
Query: 61 KTGL-------------LGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSN 107
GL L + V VA+G+ YL + + IHRDL A N+L+ +
Sbjct: 130 PPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTED 186
Query: 108 MNPKISDFGIARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETL 167
KI+DFG+AR + T +M+PE +++ +SDV+SFGVL+ E
Sbjct: 187 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 246
Query: 168 S 168
+
Sbjct: 247 T 247
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 88/176 (50%), Gaps = 21/176 (11%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT-KTGLLGWEMRVRI 73
E+ L+ KL H N+++LF + ++ E L FD K RI
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARI 126
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDS---NMNPKISDFGIARLFGGDELQSNT 130
++ V G+ Y+H ++ ++HRDLK NILL+S + + KI DFG++ F Q NT
Sbjct: 127 IKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-----QQNT 178
Query: 131 KRI--VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLL 184
K +GT Y++PE LRG + K DV+S GV++ LS FY + +L
Sbjct: 179 KMKDRIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG--TPPFYGKNEYDIL 231
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 94/174 (54%), Gaps = 11/174 (6%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL-FDP 59
+++ + Q L+ FKNE+ ++ K +H N++ G + + ++ ++ SL L
Sbjct: 45 VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIE 103
Query: 60 TKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIAR 119
TK ++ + I AQG+ YLH S +IHRDLK++NI L ++ KI DFG+A
Sbjct: 104 TKFEMIKL---IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLAT 157
Query: 120 LFGGDELQSNTKRIVGTYGYMSPEYAL---RGLFSIKSDVFSFGVLVLETLSSK 170
+ +++ G+ +M+PE + +S +SDV++FG+++ E ++ +
Sbjct: 158 VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 86/176 (48%), Gaps = 17/176 (9%)
Query: 7 QGLEEFKNEMMLIAKL-QHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGL- 64
+ L + +EM ++ + +H+N++ L G C + G +I EY +L +L G+
Sbjct: 69 KDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGME 128
Query: 65 ------------LGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKI 112
+ ++ V +A+G+ YL + + IHRDL A N+L+ N KI
Sbjct: 129 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKI 185
Query: 113 SDFGIARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+DFG+AR + T +M+PE +++ +SDV+SFGVL+ E +
Sbjct: 186 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 86/176 (48%), Gaps = 17/176 (9%)
Query: 7 QGLEEFKNEMMLIAKL-QHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGL- 64
+ L + +EM ++ + +H+N++ L G C + G +I EY +L +L G+
Sbjct: 82 EDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 65 ------------LGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKI 112
+ ++ V +A+G+ YL + + IHRDL A N+L+ N KI
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKI 198
Query: 113 SDFGIARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+DFG+AR + T +M+PE +++ +SDV+SFGVL+ E +
Sbjct: 199 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 86/176 (48%), Gaps = 17/176 (9%)
Query: 7 QGLEEFKNEMMLIAKL-QHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGL- 64
+ L + +EM ++ + +H+N++ L G C + G +I EY +L +L G+
Sbjct: 82 KDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 65 ------------LGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKI 112
+ ++ V +A+G+ YL + + IHRDL A N+L+ N KI
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKI 198
Query: 113 SDFGIARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+DFG+AR + T +M+PE +++ +SDV+SFGVL+ E +
Sbjct: 199 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 86/176 (48%), Gaps = 17/176 (9%)
Query: 7 QGLEEFKNEMMLIAKL-QHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGL- 64
+ L + +EM ++ + +H+N++ L G C + G +I EY +L +L G+
Sbjct: 74 KDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGME 133
Query: 65 ------------LGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKI 112
+ ++ V +A+G+ YL + + IHRDL A N+L+ N KI
Sbjct: 134 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKI 190
Query: 113 SDFGIARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+DFG+AR + T +M+PE +++ +SDV+SFGVL+ E +
Sbjct: 191 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 86/176 (48%), Gaps = 17/176 (9%)
Query: 7 QGLEEFKNEMMLIAKL-QHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGL- 64
+ L + +EM ++ + +H+N++ L G C + G +I EY +L +L G+
Sbjct: 71 KDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGME 130
Query: 65 ------------LGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKI 112
+ ++ V +A+G+ YL + + IHRDL A N+L+ N KI
Sbjct: 131 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKI 187
Query: 113 SDFGIARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+DFG+AR + T +M+PE +++ +SDV+SFGVL+ E +
Sbjct: 188 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 114/265 (43%), Gaps = 49/265 (18%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFD------------ 58
EF NE ++ + ++VRL G + ++I E M L +L
Sbjct: 96 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 155
Query: 59 -PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGI 117
P+ + + +++ +A G+ YL+ + +HRDL A N ++ + KI DFG+
Sbjct: 156 PPSLSKM------IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGM 206
Query: 118 AR-LFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE--TLSSKKNAH 174
R ++ D + K ++ +MSPE G+F+ SDV+SFGV++ E TL+ +
Sbjct: 207 TRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 265
Query: 175 FYNTDSLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTM 234
N L + + +L + P + + +C Q N RP+
Sbjct: 266 LSNEQVLRFV--------------MEGGLLDKPDNCP--DMLFELMRMCWQYNPKMRPSF 309
Query: 235 LEVISMLTNENVILPSPLQPAFSHV 259
LE+IS + E ++P F V
Sbjct: 310 LEIISSIKEE-------MEPGFREV 327
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 10/160 (6%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEH-GEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
+ F E ++ +L+H NLV+L G +E G ++ EYM SL +L ++ +LG +
Sbjct: 44 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGD 102
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
++ V + + YL + +HRDL A N+L+ + K+SDFG+ + E S
Sbjct: 103 CLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASS 154
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+ +PE FS KSDV+SFG+L+ E S
Sbjct: 155 TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 194
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 88/176 (50%), Gaps = 21/176 (11%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT-KTGLLGWEMRVRI 73
E+ L+ KL H N+++LF + ++ E L FD K RI
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARI 126
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDS---NMNPKISDFGIARLFGGDELQSNT 130
++ V G+ Y+H ++ ++HRDLK NILL+S + + KI DFG++ F Q NT
Sbjct: 127 IKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-----QQNT 178
Query: 131 KRI--VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLL 184
K +GT Y++PE LRG + K DV+S GV++ LS FY + +L
Sbjct: 179 KMKDRIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG--TPPFYGKNEYDIL 231
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 88/176 (50%), Gaps = 21/176 (11%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT-KTGLLGWEMRVRI 73
E+ L+ KL H N+++LF + ++ E L FD K RI
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARI 126
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDS---NMNPKISDFGIARLFGGDELQSNT 130
++ V G+ Y+H ++ ++HRDLK NILL+S + + KI DFG++ F Q NT
Sbjct: 127 IKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-----QQNT 178
Query: 131 KRI--VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLL 184
K +GT Y++PE LRG + K DV+S GV++ LS FY + +L
Sbjct: 179 KMKDRIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG--TPPFYGKNEYDIL 231
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 114/265 (43%), Gaps = 49/265 (18%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFD------------ 58
EF NE ++ + ++VRL G + ++I E M L +L
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 59 -PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGI 117
P+ + + +++ +A G+ YL+ + +HRDL A N + + KI DFG+
Sbjct: 121 PPSLSKM------IQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGM 171
Query: 118 AR-LFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE--TLSSKKNAH 174
R ++ D + K ++ +MSPE G+F+ SDV+SFGV++ E TL+ +
Sbjct: 172 TRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 230
Query: 175 FYNTDSLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTM 234
N L + + +L + P + + + +C Q N RP+
Sbjct: 231 LSNEQVLRFV--------------MEGGLLDKPDNCP--DMLLELMRMCWQYNPKMRPSF 274
Query: 235 LEVISMLTNENVILPSPLQPAFSHV 259
LE+IS + E ++P F V
Sbjct: 275 LEIISSIKEE-------MEPGFREV 292
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 94/174 (54%), Gaps = 11/174 (6%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL-FDP 59
+++ + Q L+ FKNE+ ++ K +H N++ G + + ++ ++ SL L
Sbjct: 68 VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIE 126
Query: 60 TKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIAR 119
TK ++ + I AQG+ YLH S +IHRDLK++NI L ++ KI DFG+A
Sbjct: 127 TKFEMIKL---IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLAT 180
Query: 120 LFGGDELQSNTKRIVGTYGYMSPEYAL---RGLFSIKSDVFSFGVLVLETLSSK 170
+ +++ G+ +M+PE + +S +SDV++FG+++ E ++ +
Sbjct: 181 VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 82/160 (51%), Gaps = 10/160 (6%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEH-GEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
+ F E ++ +L+H NLV+L G +E G ++ EYM SL +L ++ +LG +
Sbjct: 231 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGD 289
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
++ V + + YL + +HRDL A N+L+ + K+SDFG+ + Q
Sbjct: 290 CLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQD 344
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
K V + +PE FS KSDV+SFG+L+ E S
Sbjct: 345 TGKLPV---KWTAPEALREKKFSTKSDVWSFGILLWEIYS 381
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 110/264 (41%), Gaps = 47/264 (17%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFD------------ 58
EF NE ++ + ++VRL G + ++I E M L +L
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 59 -PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGI 117
P+ + + +++ +A G+ YL+ + +HRDL A N ++ + KI DFG+
Sbjct: 128 PPSLSKM------IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGM 178
Query: 118 ARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE--TLSSKKNAHF 175
R + + + +MSPE G+F+ SDV+SFGV++ E TL+ +
Sbjct: 179 TRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 238
Query: 176 YNTDSLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTML 235
N L + + +L + P + + +C Q N RP+ L
Sbjct: 239 SNEQVLRFV--------------MEGGLLDKPDNCP--DMLFELMRMCWQYNPKMRPSFL 282
Query: 236 EVISMLTNENVILPSPLQPAFSHV 259
E+IS + E ++P F V
Sbjct: 283 EIISSIKEE-------MEPGFREV 299
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 118/243 (48%), Gaps = 29/243 (11%)
Query: 7 QGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
+ +EF+ E+ +++ L H N+V+L+G + H ++ E++P L L D K +
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLD--KAHPIK 120
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDS-----NMNPKISDFGIARLF 121
W +++R++ +A G+ Y+ + + ++HRDL++ NI L S + K++DFG+++
Sbjct: 121 WSVKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-- 177
Query: 122 GGDELQSNTKRIVGTYGYMSPEY--ALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTD 179
+ + ++G + +M+PE A ++ K+D +SF +++ L+ + Y+
Sbjct: 178 ---QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG 234
Query: 180 SLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVIS 239
+ + N R L +I ++ R NV LC + RP ++
Sbjct: 235 KIKFI-------NMIREEGLRPTIPEDCPP-----RLRNVIELCWSGDPKKRPHFSYIVK 282
Query: 240 MLT 242
L+
Sbjct: 283 ELS 285
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 17/181 (9%)
Query: 2 SSQSGQGLEEFKNEMMLIAKL-QHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT 60
S + + L + +EM ++ + +H+N++ L G C + G +I EY +L +L
Sbjct: 111 SDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR 170
Query: 61 KTGL-------------LGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSN 107
GL L + V VA+G+ YL + + IHRDL A N+L+ +
Sbjct: 171 PPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTED 227
Query: 108 MNPKISDFGIARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETL 167
KI+DFG+AR + T +M+PE +++ +SDV+SFGVL+ E
Sbjct: 228 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 287
Query: 168 S 168
+
Sbjct: 288 T 288
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 86/176 (48%), Gaps = 17/176 (9%)
Query: 7 QGLEEFKNEMMLIAKL-QHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGL- 64
+ L + +EM ++ + +H+N++ L G C + G +I EY +L +L G+
Sbjct: 82 KDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 65 ------------LGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKI 112
+ ++ V +A+G+ YL + + IHRDL A N+L+ N KI
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKI 198
Query: 113 SDFGIARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+DFG+AR + T +M+PE +++ +SDV+SFGVL+ E +
Sbjct: 199 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 93/174 (53%), Gaps = 11/174 (6%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL-FDP 59
+++ + Q L+ FKNE+ ++ K +H N++ G + ++ ++ SL L
Sbjct: 40 VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQWCEGSSLYHHLHIIE 98
Query: 60 TKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIAR 119
TK ++ + I AQG+ YLH S +IHRDLK++NI L ++ KI DFG+A
Sbjct: 99 TKFEMIKL---IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLAT 152
Query: 120 LFGGDELQSNTKRIVGTYGYMSPEYAL---RGLFSIKSDVFSFGVLVLETLSSK 170
+ +++ G+ +M+PE + +S +SDV++FG+++ E ++ +
Sbjct: 153 VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 91/170 (53%), Gaps = 14/170 (8%)
Query: 3 SQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMP-NKSLDCFLFDPTK 61
+ S + +E +E ++A + + ++ RL G C+ + LI + MP LD
Sbjct: 56 ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDN 114
Query: 62 TG---LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
G LL W +++ A+G+ YL R++HRDL A N+L+ + + KI+DFG+A
Sbjct: 115 IGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA 165
Query: 119 RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+L G +E + + + +M+ E L +++ +SDV+S+GV V E ++
Sbjct: 166 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 109/253 (43%), Gaps = 40/253 (15%)
Query: 10 EEFKNEMMLIAKL-QHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKT------ 62
E +E+ +++ L QH N+V L G C G ++I EY L FL ++
Sbjct: 94 EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPA 153
Query: 63 -GLLGWEMRVRIL----EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGI 117
+ R L VAQG+ +L + IHRD+ A N+LL + KI DFG+
Sbjct: 154 FAIANSTASTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGL 210
Query: 118 ARLFGGDE---LQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAH 174
AR D ++ N + V +M+PE +++++SDV+S+G+L+ E S N +
Sbjct: 211 ARDIMNDSNYIVKGNARLPV---KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
Query: 175 ---FYNTDSLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADR 231
N+ L+ + + A + + SI+Q C R
Sbjct: 268 PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQ----------------ACWALEPTHR 311
Query: 232 PTMLEVISMLTNE 244
PT ++ S L +
Sbjct: 312 PTFQQICSFLQEQ 324
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 14/171 (8%)
Query: 2 SSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMP-NKSLDCFLFDPT 60
+ S + +E +E ++A + + ++ RL G C+ + LI + MP LD
Sbjct: 54 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKD 112
Query: 61 KTG---LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGI 117
G LL W +++ A+G+ YL R++HRDL A N+L+ + + KI+DFG+
Sbjct: 113 NIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGL 163
Query: 118 ARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
A+L G +E + + + +M+ E L +++ +SDV+S+GV V E ++
Sbjct: 164 AKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 96/178 (53%), Gaps = 19/178 (10%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL-FDP 59
+++ + Q L+ FKNE+ ++ K +H N++ G + + ++ ++ SL L
Sbjct: 60 VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIE 118
Query: 60 TKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA- 118
TK ++ + I AQG+ YLH S +IHRDLK++NI L ++ KI DFG+A
Sbjct: 119 TKFEMIKL---IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLAT 172
Query: 119 ---RLFGGDELQSNTKRIVGTYGYMSPEYAL---RGLFSIKSDVFSFGVLVLETLSSK 170
R G + + ++ G+ +M+PE + +S +SDV++FG+++ E ++ +
Sbjct: 173 EKSRWSGSHQFE----QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 96/178 (53%), Gaps = 19/178 (10%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL-FDP 59
+++ + Q L+ FKNE+ ++ K +H N++ G + + ++ ++ SL L
Sbjct: 40 VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIE 98
Query: 60 TKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA- 118
TK ++ + I AQG+ YLH S +IHRDLK++NI L ++ KI DFG+A
Sbjct: 99 TKFEMIKL---IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLAT 152
Query: 119 ---RLFGGDELQSNTKRIVGTYGYMSPEYAL---RGLFSIKSDVFSFGVLVLETLSSK 170
R G + + ++ G+ +M+PE + +S +SDV++FG+++ E ++ +
Sbjct: 153 EKSRWSGSHQFE----QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E K E+ + L H N+V+ +G E + L EY L FD + + E
Sbjct: 49 ENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 104
Query: 70 RV-RILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
R + G++YLH + + HRD+K N+LLD N KISDFG+A +F + +
Sbjct: 105 DAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
++ GT Y++PE R F + DV+S G+++ L+ +
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 117/243 (48%), Gaps = 29/243 (11%)
Query: 7 QGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
+ +EF+ E+ +++ L H N+V+L+G + H ++ E++P L L D K +
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLD--KAHPIK 120
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDS-----NMNPKISDFGIARLF 121
W +++R++ +A G+ Y+ + + ++HRDL++ NI L S + K++DFG ++
Sbjct: 121 WSVKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-- 177
Query: 122 GGDELQSNTKRIVGTYGYMSPEY--ALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTD 179
+ + ++G + +M+PE A ++ K+D +SF +++ L+ + Y+
Sbjct: 178 ---QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG 234
Query: 180 SLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVIS 239
+ + N R L +I ++ R NV LC + RP ++
Sbjct: 235 KIKFI-------NMIREEGLRPTIPEDCPP-----RLRNVIELCWSGDPKKRPHFSYIVK 282
Query: 240 MLT 242
L+
Sbjct: 283 ELS 285
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E K E+ + L H N+V+ +G E + L EY L FD + + E
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 104
Query: 70 RV-RILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
R + G++YLH + + HRD+K N+LLD N KISDFG+A +F + +
Sbjct: 105 DAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
++ GT Y++PE R F + DV+S G+++ L+ +
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 88/174 (50%), Gaps = 24/174 (13%)
Query: 11 EFKNEMMLIAKL-QHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL-------FDP--- 59
+F E+ ++ KL H N++ L G C G L EY P+ +L FL DP
Sbjct: 68 DFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFA 127
Query: 60 ---TKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFG 116
+ L + + VA+G+ YL S+ + IHR+L A NIL+ N KI+DFG
Sbjct: 128 IANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFG 184
Query: 117 IARLFGGDELQSNTKRIVG--TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
++R G E+ K+ +G +M+ E +++ SDV+S+GVL+ E +S
Sbjct: 185 LSR---GQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E K E+ + L H N+V+ +G E + L EY L FD + + E
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 104
Query: 70 RV-RILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
R + G++YLH + + HRD+K N+LLD N KISDFG+A +F + +
Sbjct: 105 DAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
++ GT Y++PE R F + DV+S G+++ L+ +
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E K E+ + L H N+V+ +G E + L EY L FD + + E
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 104
Query: 70 RV-RILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
R + G++YLH + + HRD+K N+LLD N KISDFG+A +F + +
Sbjct: 105 DAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
++ GT Y++PE R F + DV+S G+++ L+ +
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E K E+ + L H N+V+ +G E + L EY L FD + + E
Sbjct: 50 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 105
Query: 70 RV-RILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
R + G++YLH + + HRD+K N+LLD N KISDFG+A +F + +
Sbjct: 106 DAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
++ GT Y++PE R F + DV+S G+++ L+ +
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E K E+ + L H N+V+ +G E + L EY L FD + + E
Sbjct: 48 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 103
Query: 70 RV-RILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
R + G++YLH + + HRD+K N+LLD N KISDFG+A +F + +
Sbjct: 104 DAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 160
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
++ GT Y++PE R F + DV+S G+++ L+ +
Sbjct: 161 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 203
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFD----PTKTGLLG 66
+F E ++I+K H+N+VR G ++ + ++ E M L FL + P++ L
Sbjct: 80 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 139
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLD---SNMNPKISDFGIARLFGG 123
+ + +A G YL IHRD+ A N LL KI DFG+A+
Sbjct: 140 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ---- 192
Query: 124 DELQSNTKRIVG----TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
D +++ R G +M PE + G+F+ K+D +SFGVL+ E S
Sbjct: 193 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E K E+ + L H N+V+ +G E + L EY L FD + + E
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 104
Query: 70 RV-RILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
R + G++YLH + + HRD+K N+LLD N KISDFG+A +F + +
Sbjct: 105 DAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
++ GT Y++PE R F + DV+S G+++ L+ +
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E K E+ + L H N+V+ +G E + L EY L FD + + E
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 104
Query: 70 RV-RILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
R + G++YLH + + HRD+K N+LLD N KISDFG+A +F + +
Sbjct: 105 DAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
++ GT Y++PE R F + DV+S G+++ L+ +
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E K E+ + L H N+V+ +G E + L EY L FD + + E
Sbjct: 49 ENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 104
Query: 70 RV-RILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
R + G++YLH + + HRD+K N+LLD N KISDFG+A +F + +
Sbjct: 105 DAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
++ GT Y++PE R F + DV+S G+++ L+ +
Sbjct: 162 LLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 92/170 (54%), Gaps = 14/170 (8%)
Query: 3 SQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT-- 60
+ S + +E +E ++A + + ++ RL G C+ + LI + MP L ++ +
Sbjct: 49 ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN 107
Query: 61 --KTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
LL W +++ A+G+ YL R++HRDL A N+L+ + + KI+DFG+A
Sbjct: 108 IGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA 158
Query: 119 RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+L G +E + + + +M+ E L +++ +SDV+S+GV V E ++
Sbjct: 159 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 80/153 (52%), Gaps = 9/153 (5%)
Query: 13 KNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVR 72
+ E+ ++++ + + +G ++ + +I EY+ S D + G
Sbjct: 69 QQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSA----LDLLRAGPFDEFQIAT 124
Query: 73 ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKR 132
+L+ + +GL YLH + IHRD+KA+N+LL + K++DFG+A +++ NT
Sbjct: 125 MLKEILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT-- 179
Query: 133 IVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
VGT +M+PE + + K+D++S G+ +E
Sbjct: 180 FVGTPFWMAPEVIQQSAYDSKADIWSLGITAIE 212
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 92/171 (53%), Gaps = 14/171 (8%)
Query: 2 SSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT- 60
+ S + +E +E ++A + + ++ RL G C+ + LI + MP L ++ +
Sbjct: 51 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKD 109
Query: 61 ---KTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGI 117
LL W +++ A+G+ YL R++HRDL A N+L+ + + KI+DFG+
Sbjct: 110 NIGSQYLLNWCVQI------AEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGL 160
Query: 118 ARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
A+L G +E + + + +M+ E L +++ +SDV+S+GV V E ++
Sbjct: 161 AKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 90/167 (53%), Gaps = 8/167 (4%)
Query: 3 SQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL-FDPTK 61
+ S + +E +E ++A + + ++ RL G C+ + LI + MP C L +
Sbjct: 55 ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMP---FGCLLDYVREH 110
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
+G + + +A+G+ YL R++HRDL A N+L+ + + KI+DFG+A+L
Sbjct: 111 KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
G +E + + + +M+ E L +++ +SDV+S+GV V E ++
Sbjct: 168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E K E+ + L H N+V+ +G E + L EY L FD + + E
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 104
Query: 70 RV-RILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
R + G++YLH + + HRD+K N+LLD N KISDFG+A +F + +
Sbjct: 105 DAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
++ GT Y++PE R F + DV+S G+++ L+ +
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E K E+ + L H N+V+ +G E + L EY L FD + + E
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 104
Query: 70 RV-RILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
R + G++YLH + + HRD+K N+LLD N KISDFG+A +F + +
Sbjct: 105 DAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
++ GT Y++PE R F + DV+S G+++ L+ +
Sbjct: 162 LLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E K E+ + L H N+V+ +G E + L EY L FD + + E
Sbjct: 50 ENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 105
Query: 70 RV-RILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
R + G++YLH + + HRD+K N+LLD N KISDFG+A +F + +
Sbjct: 106 DAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
++ GT Y++PE R F + DV+S G+++ L+ +
Sbjct: 163 LLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 92/170 (54%), Gaps = 14/170 (8%)
Query: 3 SQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT-- 60
+ S + +E +E ++A + + ++ RL G C+ + LI + MP L ++ +
Sbjct: 56 ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDN 114
Query: 61 --KTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
LL W +++ A+G+ YL R++HRDL A N+L+ + + KI+DFG+A
Sbjct: 115 IGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA 165
Query: 119 RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+L G +E + + + +M+ E L +++ +SDV+S+GV V E ++
Sbjct: 166 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 90/167 (53%), Gaps = 8/167 (4%)
Query: 3 SQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL-FDPTK 61
+ S + +E +E ++A + + ++ RL G C+ + LI + MP C L +
Sbjct: 62 ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMP---FGCLLDYVREH 117
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
+G + + +A+G+ YL R++HRDL A N+L+ + + KI+DFG+A+L
Sbjct: 118 KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 174
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
G +E + + + +M+ E L +++ +SDV+S+GV V E ++
Sbjct: 175 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 87/166 (52%), Gaps = 8/166 (4%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT 60
+S S + EE + E+ ++A ++H N+V+ E+G ++ +Y + D F
Sbjct: 59 ISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYC--EGGDLFKRINA 116
Query: 61 KTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARL 120
+ G+L E + IL+ Q L L H +++HRD+K+ NI L + ++ DFGIAR+
Sbjct: 117 QKGVLFQEDQ--ILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARV 174
Query: 121 FGGD-ELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
EL + +GT Y+SPE ++ KSD+++ G ++ E
Sbjct: 175 LNSTVEL---ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYE 217
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E K E+ + L H N+V+ +G E + L EY L FD + + E
Sbjct: 50 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 105
Query: 70 RV-RILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
R + G++YLH + + HRD+K N+LLD N KISDFG+A +F + +
Sbjct: 106 DAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
++ GT Y++PE R F + DV+S G+++ L+ +
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E K E+ + L H N+V+ +G E + L EY L FD + + E
Sbjct: 50 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 105
Query: 70 RV-RILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
R + G++YLH + + HRD+K N+LLD N KISDFG+A +F + +
Sbjct: 106 DAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
++ GT Y++PE R F + DV+S G+++ L+ +
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E K E+ + L H N+V+ +G E + L EY L FD + + E
Sbjct: 50 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 105
Query: 70 RV-RILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
R + G++YLH + + HRD+K N+LLD N KISDFG+A +F + +
Sbjct: 106 DAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
++ GT Y++PE R F + DV+S G+++ L+ +
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E K E+ + L H N+V+ +G E + L EY L FD + + E
Sbjct: 50 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 105
Query: 70 RV-RILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
R + G++YLH + + HRD+K N+LLD N KISDFG+A +F + +
Sbjct: 106 DAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
++ GT Y++PE R F + DV+S G+++ L+ +
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E K E+ + L H N+V+ +G E + L EY L FD + + E
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 104
Query: 70 RV-RILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
R + G++YLH + + HRD+K N+LLD N KISDFG+A +F + +
Sbjct: 105 DAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
++ GT Y++PE R F + DV+S G+++ L+ +
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 96/178 (53%), Gaps = 19/178 (10%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL-FDP 59
+++ + Q L+ FKNE+ ++ K +H N++ G + + ++ ++ SL L
Sbjct: 68 VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIE 126
Query: 60 TKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA- 118
TK ++ + I AQG+ YLH S +IHRDLK++NI L ++ KI DFG+A
Sbjct: 127 TKFEMIKL---IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLAT 180
Query: 119 ---RLFGGDELQSNTKRIVGTYGYMSPEYAL---RGLFSIKSDVFSFGVLVLETLSSK 170
R G + + ++ G+ +M+PE + +S +SDV++FG+++ E ++ +
Sbjct: 181 EKSRWSGSHQFE----QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E K E+ + L H N+V+ +G E + L EY L FD + + E
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 104
Query: 70 RV-RILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
R + G++YLH + + HRD+K N+LLD N KISDFG+A +F + +
Sbjct: 105 DAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
++ GT Y++PE R F + DV+S G+++ L+ +
Sbjct: 162 LLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 92/171 (53%), Gaps = 14/171 (8%)
Query: 2 SSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT- 60
+ S + +E +E ++A + + ++ RL G C+ + LI + MP L ++ +
Sbjct: 54 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKD 112
Query: 61 ---KTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGI 117
LL W +++ A+G+ YL R++HRDL A N+L+ + + KI+DFG+
Sbjct: 113 NIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGL 163
Query: 118 ARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
A+L G +E + + + +M+ E L +++ +SDV+S+GV V E ++
Sbjct: 164 AKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 92/171 (53%), Gaps = 14/171 (8%)
Query: 2 SSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT- 60
+ S + +E +E ++A + + ++ RL G C+ + LI + MP L ++ +
Sbjct: 88 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKD 146
Query: 61 ---KTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGI 117
LL W +++ A+G+ YL R++HRDL A N+L+ + + KI+DFG+
Sbjct: 147 NIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGL 197
Query: 118 ARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
A+L G +E + + + +M+ E L +++ +SDV+S+GV V E ++
Sbjct: 198 AKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E K E+ + L H N+V+ +G E + L EY L FD + + E
Sbjct: 50 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 105
Query: 70 RV-RILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
R + G++YLH + + HRD+K N+LLD N KISDFG+A +F + +
Sbjct: 106 DAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
++ GT Y++PE R F + DV+S G+++ L+ +
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 81/154 (52%), Gaps = 13/154 (8%)
Query: 22 LQHRNLVRLFGCCI-----EHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRILEG 76
+H N+VRLF C + L++E++ ++ L +L + G+ ++ + +
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQ- 128
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
+ +GL +LH + RV+HRDLK NIL+ S+ K++DFG+AR++ Q +V T
Sbjct: 129 LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS---FQMALTSVVVT 182
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
Y +PE L+ ++ D++S G + E K
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 91/166 (54%), Gaps = 6/166 (3%)
Query: 3 SQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKT 62
+ S + +E +E ++A + + ++ RL G C+ + LI + MP L ++ +
Sbjct: 57 ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDN 115
Query: 63 GLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG 122
+G + + +A+G+ YL R++HRDL A N+L+ + + KI+DFG+A+L G
Sbjct: 116 --IGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 170
Query: 123 GDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+E + + + +M+ E L +++ +SDV+S+GV V E ++
Sbjct: 171 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 90/167 (53%), Gaps = 8/167 (4%)
Query: 3 SQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL-FDPTK 61
+ S + +E +E ++A + + ++ RL G C+ + LI + MP C L +
Sbjct: 57 ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMP---FGCLLDYVREH 112
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
+G + + +A+G+ YL R++HRDL A N+L+ + + KI+DFG+A+L
Sbjct: 113 KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 169
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
G +E + + + +M+ E L +++ +SDV+S+GV V E ++
Sbjct: 170 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 90/168 (53%), Gaps = 8/168 (4%)
Query: 2 SSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL-FDPT 60
+ S + +E +E ++A + + ++ RL G C+ + LI + MP C L +
Sbjct: 64 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMP---FGCLLDYVRE 119
Query: 61 KTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARL 120
+G + + +A+G+ YL R++HRDL A N+L+ + + KI+DFG+A+L
Sbjct: 120 HKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 176
Query: 121 FGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
G +E + + + +M+ E L +++ +SDV+S+GV V E ++
Sbjct: 177 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 90/167 (53%), Gaps = 8/167 (4%)
Query: 3 SQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL-FDPTK 61
+ S + +E +E ++A + + ++ RL G C+ + LI + MP C L +
Sbjct: 61 ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMP---FGCLLDYVREH 116
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
+G + + +A+G+ YL R++HRDL A N+L+ + + KI+DFG+A+L
Sbjct: 117 KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 173
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
G +E + + + +M+ E L +++ +SDV+S+GV V E ++
Sbjct: 174 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 90/167 (53%), Gaps = 8/167 (4%)
Query: 3 SQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL-FDPTK 61
+ S + +E +E ++A + + ++ RL G C+ + LI + MP C L +
Sbjct: 59 ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMP---FGCLLDYVREH 114
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
+G + + +A+G+ YL R++HRDL A N+L+ + + KI+DFG+A+L
Sbjct: 115 KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 171
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
G +E + + + +M+ E L +++ +SDV+S+GV V E ++
Sbjct: 172 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 92/170 (54%), Gaps = 14/170 (8%)
Query: 3 SQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT-- 60
+ S + +E +E ++A + + ++ RL G C+ + LI + MP L ++ +
Sbjct: 62 ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN 120
Query: 61 --KTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
LL W +++ A+G+ YL R++HRDL A N+L+ + + KI+DFG+A
Sbjct: 121 IGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA 171
Query: 119 RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+L G +E + + + +M+ E L +++ +SDV+S+GV V E ++
Sbjct: 172 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 90/168 (53%), Gaps = 8/168 (4%)
Query: 2 SSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL-FDPT 60
+ S + +E +E ++A + + ++ RL G C+ + LI + MP C L +
Sbjct: 54 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMP---FGCLLDYVRE 109
Query: 61 KTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARL 120
+G + + +A+G+ YL R++HRDL A N+L+ + + KI+DFG+A+L
Sbjct: 110 HKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
Query: 121 FGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
G +E + + + +M+ E L +++ +SDV+S+GV V E ++
Sbjct: 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 17/176 (9%)
Query: 7 QGLEEFKNEMMLIAKL-QHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGL- 64
+ L + +EM ++ + +H+N++ L G C + G +I EY +L +L G+
Sbjct: 82 KDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 65 ------------LGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKI 112
+ ++ V +A+G+ YL + + IHRDL A N+L+ N +I
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRI 198
Query: 113 SDFGIARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+DFG+AR + T +M+PE +++ +SDV+SFGVL+ E +
Sbjct: 199 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 92/171 (53%), Gaps = 14/171 (8%)
Query: 2 SSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT- 60
+ S + +E +E ++A + + ++ RL G C+ + LI + MP L ++ +
Sbjct: 54 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKD 112
Query: 61 ---KTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGI 117
LL W +++ A+G+ YL R++HRDL A N+L+ + + KI+DFG+
Sbjct: 113 NIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGL 163
Query: 118 ARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
A+L G +E + + + +M+ E L +++ +SDV+S+GV V E ++
Sbjct: 164 AKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 92/170 (54%), Gaps = 14/170 (8%)
Query: 3 SQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT-- 60
+ S + +E +E ++A + + ++ RL G C+ + LI + MP L ++ +
Sbjct: 62 ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN 120
Query: 61 --KTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
LL W +++ A+G+ YL R++HRDL A N+L+ + + KI+DFG+A
Sbjct: 121 IGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA 171
Query: 119 RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+L G +E + + + +M+ E L +++ +SDV+S+GV V E ++
Sbjct: 172 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 92/170 (54%), Gaps = 14/170 (8%)
Query: 3 SQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT-- 60
+ S + +E +E ++A + + ++ RL G C+ + LI + MP L ++ +
Sbjct: 58 ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDN 116
Query: 61 --KTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
LL W +++ A+G+ YL R++HRDL A N+L+ + + KI+DFG+A
Sbjct: 117 IGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA 167
Query: 119 RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+L G +E + + + +M+ E L +++ +SDV+S+GV V E ++
Sbjct: 168 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 91/170 (53%), Gaps = 14/170 (8%)
Query: 3 SQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSL-DCFLFDPTK 61
+ S + +E +E ++A + + ++ RL G C+ + LI + MP L D
Sbjct: 58 ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN 116
Query: 62 TG---LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
G LL W +++ A+G+ YL R++HRDL A N+L+ + + KI+DFG+A
Sbjct: 117 IGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA 167
Query: 119 RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+L G +E + + + +M+ E L +++ +SDV+S+GV V E ++
Sbjct: 168 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E K E+ + L H N+V+ +G E + L EY L FD + + E
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 104
Query: 70 RV-RILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
R + G++YLH + + HRD+K N+LLD N KISDFG+A +F + +
Sbjct: 105 DAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
++ GT Y++PE R F + DV+S G+++ L+ +
Sbjct: 162 LLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 92/171 (53%), Gaps = 14/171 (8%)
Query: 2 SSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT- 60
+ S + +E +E ++A + + ++ RL G C+ + LI + MP L ++ +
Sbjct: 57 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKD 115
Query: 61 ---KTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGI 117
LL W +++ A+G+ YL R++HRDL A N+L+ + + KI+DFG+
Sbjct: 116 NIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGL 166
Query: 118 ARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
A+L G +E + + + +M+ E L +++ +SDV+S+GV V E ++
Sbjct: 167 AKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 90/168 (53%), Gaps = 8/168 (4%)
Query: 2 SSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL-FDPT 60
+ S + +E +E ++A + + ++ RL G C+ + LI + MP C L +
Sbjct: 57 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMP---FGCLLDYVRE 112
Query: 61 KTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARL 120
+G + + +A+G+ YL R++HRDL A N+L+ + + KI+DFG+A+L
Sbjct: 113 HKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
Query: 121 FGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
G +E + + + +M+ E L +++ +SDV+S+GV V E ++
Sbjct: 170 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 90/168 (53%), Gaps = 8/168 (4%)
Query: 2 SSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL-FDPT 60
+ S + +E +E ++A + + ++ RL G C+ + LI + MP C L +
Sbjct: 79 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMP---FGCLLDYVRE 134
Query: 61 KTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARL 120
+G + + +A+G+ YL R++HRDL A N+L+ + + KI+DFG+A+L
Sbjct: 135 HKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 191
Query: 121 FGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
G +E + + + +M+ E L +++ +SDV+S+GV V E ++
Sbjct: 192 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 81/154 (52%), Gaps = 13/154 (8%)
Query: 22 LQHRNLVRLFGCCI-----EHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRILEG 76
+H N+VRLF C + L++E++ ++ L +L + G+ ++ + +
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQ- 128
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
+ +GL +LH + RV+HRDLK NIL+ S+ K++DFG+AR++ Q +V T
Sbjct: 129 LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS---FQMALTSVVVT 182
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
Y +PE L+ ++ D++S G + E K
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 82/154 (53%), Gaps = 11/154 (7%)
Query: 13 KNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKS-LDCFLFDPTKTGLLGWEMRV 71
+ E+ ++++ + + +G ++ + +I EY+ S LD L +P G L
Sbjct: 68 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD--LLEP---GPLDETQIA 122
Query: 72 RILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTK 131
IL + +GL YLH + IHRD+KA+N+LL + K++DFG+A +++ N
Sbjct: 123 TILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX- 178
Query: 132 RIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
VGT +M+PE + + K+D++S G+ +E
Sbjct: 179 -FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIE 211
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 81/154 (52%), Gaps = 13/154 (8%)
Query: 22 LQHRNLVRLFGCCI-----EHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRILEG 76
+H N+VRLF C + L++E++ ++ L +L + G+ ++ + +
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQ- 128
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
+ +GL +LH + RV+HRDLK NIL+ S+ K++DFG+AR++ Q +V T
Sbjct: 129 LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS---FQMALTSVVVT 182
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
Y +PE L+ ++ D++S G + E K
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 82/154 (53%), Gaps = 11/154 (7%)
Query: 13 KNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKS-LDCFLFDPTKTGLLGWEMRV 71
+ E+ ++++ + + +G ++ + +I EY+ S LD L +P G L
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD--LLEP---GPLDETQIA 107
Query: 72 RILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTK 131
IL + +GL YLH + IHRD+KA+N+LL + K++DFG+A +++ N
Sbjct: 108 TILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX- 163
Query: 132 RIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
VGT +M+PE + + K+D++S G+ +E
Sbjct: 164 -FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIE 196
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRIL 74
E+ ++ + +V +G GE + E+M SLD L + + + E+ ++
Sbjct: 64 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKR---IPEEILGKVS 120
Query: 75 EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIV 134
V +GL YL + +++HRD+K SNIL++S K+ DFG++ G + S V
Sbjct: 121 IAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFV 174
Query: 135 GTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
GT YM+PE +S++SD++S G+ ++E
Sbjct: 175 GTRSYMAPERLQGTHYSVQSDIWSMGLSLVE 205
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 111/262 (42%), Gaps = 49/262 (18%)
Query: 10 EEFKNEMMLIAKL-QHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLL--- 65
E +E+ +++ L QH N+V L G C G ++I EY L FL + L
Sbjct: 79 EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSL 138
Query: 66 -------------GWEMRVRIL----EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNM 108
G + +R L VAQG+ +L + IHRD+ A N+LL +
Sbjct: 139 APGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGH 195
Query: 109 NPKISDFGIARLFGGDE---LQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
KI DFG+AR D ++ N + V +M+PE +++++SDV+S+G+L+ E
Sbjct: 196 VAKIGDFGLARDIMNDSNYIVKGNARLPV---KWMAPESIFDCVYTVQSDVWSYGILLWE 252
Query: 166 TLSSKKNAH---FYNTDSLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALL 222
S N + N+ L+ + + A + + SI+Q
Sbjct: 253 IFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQ----------------A 296
Query: 223 CVQENAADRPTMLEVISMLTNE 244
C RPT ++ S L +
Sbjct: 297 CWALEPTHRPTFQQICSFLQEQ 318
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 88/163 (53%), Gaps = 22/163 (13%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCFLF--DPTKTGLL 65
+E F E ++ LQH LV+L + E I +I E+M SL FL + +K L
Sbjct: 221 VEAFLAEANVMKTLQHDKLVKLHAVVTK--EPIYIITEFMAKGSLLDFLKSDEGSKQPL- 277
Query: 66 GWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDE 125
+ +A+G+ ++ + IHRDL+A+NIL+ +++ KI+DFG+AR+
Sbjct: 278 --PKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVGAKFP 332
Query: 126 LQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
++ + +PE G F+IKSDV+SFG+L++E ++
Sbjct: 333 IK-----------WTAPEAINFGSFTIKSDVWSFGILLMEIVT 364
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 84/162 (51%), Gaps = 7/162 (4%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
L+E E+ ++ + ++V+ +G ++ + ++ EY S+ + KT L +
Sbjct: 68 LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT--LTED 125
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
IL+ +GL YLH +R IHRD+KA NILL++ + K++DFG+A +
Sbjct: 126 EIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKR 182
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
N ++GT +M+PE ++ +D++S G+ +E K
Sbjct: 183 NX--VIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 78/165 (47%), Gaps = 16/165 (9%)
Query: 17 MLIAKLQHRNLVRLFGCCIEHGEKIL-IYEYMPNKSLDCFL------FDPTKT------G 63
+LI H N+V L G C + G ++ I E+ +L +L F P KT
Sbjct: 84 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKD 143
Query: 64 LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGG 123
L E + VA+G+ +L + + IHRDL A NILL KI DFG+AR
Sbjct: 144 FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXK 200
Query: 124 DELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
D +M+PE +++I+SDV+SFGVL+ E S
Sbjct: 201 DPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 18/164 (10%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL---FDPTKTG--LLGWEM 69
E+ L L+H+N+V+ G E+G + E +P SL L + P K +G+
Sbjct: 69 EIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYT 128
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP-KISDFGIARLFGGDELQS 128
+ +ILE GL YLH +++HRD+K N+L+++ KISDFG ++ G +
Sbjct: 129 K-QILE----GLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG--INP 178
Query: 129 NTKRIVGTYGYMSPEYALRGL--FSIKSDVFSFGVLVLETLSSK 170
T+ GT YM+PE +G + +D++S G ++E + K
Sbjct: 179 CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 91/171 (53%), Gaps = 14/171 (8%)
Query: 2 SSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT- 60
+ S + +E +E ++A + + ++ RL G C+ + LI + MP L ++ +
Sbjct: 58 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKD 116
Query: 61 ---KTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGI 117
LL W +++ A+G+ YL R++HRDL A N+L+ + + KI+DFG
Sbjct: 117 NIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGR 167
Query: 118 ARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
A+L G +E + + + +M+ E L +++ +SDV+S+GV V E ++
Sbjct: 168 AKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 17/176 (9%)
Query: 7 QGLEEFKNEMMLIAKL-QHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGL- 64
+ L + +EM ++ + +H+N++ L G C + G +I Y +L +L G+
Sbjct: 82 KDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGME 141
Query: 65 ------------LGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKI 112
+ ++ V +A+G+ YL + + IHRDL A N+L+ N KI
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKI 198
Query: 113 SDFGIARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+DFG+AR + T +M+PE +++ +SDV+SFGVL+ E +
Sbjct: 199 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 94/186 (50%), Gaps = 22/186 (11%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL-FDPTKTGLLGW 67
+ F+NE+ ++ K +H N++ G + I + ++ SL L TK +
Sbjct: 76 FQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAI-VTQWCEGSSLYKHLHVQETKFQMF-- 132
Query: 68 EMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA----RLFGG 123
+ I AQG+ YLH + +IHRD+K++NI L + KI DFG+A R G
Sbjct: 133 -QLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188
Query: 124 DELQSNTKRIVGTYGYMSPEYALR----GLFSIKSDVFSFGVLVLETLSSK-KNAHFYNT 178
+++ T G+ +M+PE +R FS +SDV+S+G+++ E ++ + +H N
Sbjct: 189 QQVEQPT----GSVLWMAPE-VIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR 243
Query: 179 DSLTLL 184
D + +
Sbjct: 244 DQIIFM 249
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 30/189 (15%)
Query: 10 EEFKNEMMLIAKL-QHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKT---GLL 65
E +E+ ++ +L H N+V L G C G LI+EY L +L + +
Sbjct: 93 EALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEI 152
Query: 66 GWEMRVRILE-----------------GVAQGLLYLHHYSRLRVIHRDLKASNILLDSNM 108
+E + R+ E VA+G+ +L S +HRDL A N+L+
Sbjct: 153 EYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGK 209
Query: 109 NPKISDFGIARLFGGDE---LQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
KI DFG+AR D ++ N + V +M+PE G+++IKSDV+S+G+L+ E
Sbjct: 210 VVKICDFGLARDIMSDSNYVVRGNARLPVK---WMAPESLFEGIYTIKSDVWSYGILLWE 266
Query: 166 TLSSKKNAH 174
S N +
Sbjct: 267 IFSLGVNPY 275
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 117/243 (48%), Gaps = 29/243 (11%)
Query: 7 QGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
+ +EF+ E+ +++ L H N+V+L+G + H ++ E++P L L D K +
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLD--KAHPIK 120
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDS-----NMNPKISDFGIARLF 121
W +++R++ +A G+ Y+ + + ++HRDL++ NI L S + K++DF +++
Sbjct: 121 WSVKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-- 177
Query: 122 GGDELQSNTKRIVGTYGYMSPEY--ALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTD 179
+ + ++G + +M+PE A ++ K+D +SF +++ L+ + Y+
Sbjct: 178 ---QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG 234
Query: 180 SLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVIS 239
+ + N R L +I ++ R NV LC + RP ++
Sbjct: 235 KIKFI-------NMIREEGLRPTIPEDCPP-----RLRNVIELCWSGDPKKRPHFSYIVK 282
Query: 240 MLT 242
L+
Sbjct: 283 ELS 285
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 18/155 (11%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKI-----LIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E+ + ++H N+++ G + G + LI + SL FL K ++ W
Sbjct: 68 EVYSLPGMKHENILQFIGA-EKRGTSVDVDLWLITAFHEKGSLSDFL----KANVVSWNE 122
Query: 70 RVRILEGVAQGLLYLHH-------YSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG 122
I E +A+GL YLH + + HRD+K+ N+LL +N+ I+DFG+A F
Sbjct: 123 LCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFE 182
Query: 123 GDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVF 157
+ +T VGT YM+PE L G + + D F
Sbjct: 183 AGKSAGDTHGQVGTRRYMAPE-VLEGAINFQRDAF 216
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 94/176 (53%), Gaps = 15/176 (8%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLF-DP 59
+++ + Q L+ FKNE+ ++ K +H N++ G + + ++ ++ SL L
Sbjct: 44 VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHASE 102
Query: 60 TKTGLLGWEMR--VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGI 117
TK +EM+ + I A+G+ YLH S +IHRDLK++NI L + KI DFG+
Sbjct: 103 TK-----FEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGL 154
Query: 118 ARLFGGDELQSNTKRIVGTYGYMSPEYAL---RGLFSIKSDVFSFGVLVLETLSSK 170
A + +++ G+ +M+PE +S +SDV++FG+++ E ++ +
Sbjct: 155 ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 18/164 (10%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL---FDPTKTG--LLGWEM 69
E+ L L+H+N+V+ G E+G + E +P SL L + P K +G+
Sbjct: 55 EIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYT 114
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP-KISDFGIARLFGGDELQS 128
+ +ILE GL YLH +++HRD+K N+L+++ KISDFG ++ G +
Sbjct: 115 K-QILE----GLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG--INP 164
Query: 129 NTKRIVGTYGYMSPEYALRGL--FSIKSDVFSFGVLVLETLSSK 170
T+ GT YM+PE +G + +D++S G ++E + K
Sbjct: 165 CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 90/166 (54%), Gaps = 6/166 (3%)
Query: 3 SQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKT 62
+ S + +E +E ++A + + ++ RL G C+ + LI + MP L ++ +
Sbjct: 57 ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDN 115
Query: 63 GLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG 122
+G + + +A+G+ YL R++HRDL A N+L+ + + KI+DFG A+L G
Sbjct: 116 --IGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLG 170
Query: 123 GDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+E + + + +M+ E L +++ +SDV+S+GV V E ++
Sbjct: 171 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 91/171 (53%), Gaps = 14/171 (8%)
Query: 2 SSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT- 60
+ S + +E +E ++A + + ++ RL G C+ + LI + MP L ++ +
Sbjct: 54 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKD 112
Query: 61 ---KTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGI 117
LL W +++ A+G+ YL R++HRDL A N+L+ + + KI+DFG
Sbjct: 113 NIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGR 163
Query: 118 ARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
A+L G +E + + + +M+ E L +++ +SDV+S+GV V E ++
Sbjct: 164 AKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 89/167 (53%), Gaps = 8/167 (4%)
Query: 3 SQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL-FDPTK 61
+ S + +E +E ++A + + ++ RL G C+ + LI + MP C L +
Sbjct: 57 ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMP---FGCLLDYVREH 112
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
+G + + +A+G+ YL R++HRDL A N+L+ + + KI+DFG A+L
Sbjct: 113 KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLL 169
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
G +E + + + +M+ E L +++ +SDV+S+GV V E ++
Sbjct: 170 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEK--ILIYEYMPNKSLDCFLFDPTKTGLLG 66
+E+ E+ ++ KL H N+V+L + E +++E + + + PT L
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV---MEVPTLKPLSE 136
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF-GGDE 125
+ R + + +G+ YLH+ ++IHRD+K SN+L+ + + KI+DFG++ F G D
Sbjct: 137 DQARF-YFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA 192
Query: 126 LQSNTKRIVGTYGYMSPE--YALRGLFSIKS-DVFSFGV 161
L SNT VGT +M+PE R +FS K+ DV++ GV
Sbjct: 193 LLSNT---VGTPAFMAPESLSETRKIFSGKALDVWAMGV 228
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 89/167 (53%), Gaps = 8/167 (4%)
Query: 3 SQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL-FDPTK 61
+ S + +E +E ++A + + ++ RL G C+ + LI + MP C L +
Sbjct: 57 ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMP---FGCLLDYVREH 112
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
+G + + +A+G+ YL R++HRDL A N+L+ + + KI+DFG A+L
Sbjct: 113 KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLL 169
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
G +E + + + +M+ E L +++ +SDV+S+GV V E ++
Sbjct: 170 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 90/170 (52%), Gaps = 14/170 (8%)
Query: 3 SQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSL-DCFLFDPTK 61
+ S + +E +E ++A + + ++ RL G C+ + LI + MP L D
Sbjct: 62 ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN 120
Query: 62 TG---LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
G LL W +++ A+G+ YL R++HRDL A N+L+ + + KI+DFG A
Sbjct: 121 IGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRA 171
Query: 119 RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+L G +E + + + +M+ E L +++ +SDV+S+GV V E ++
Sbjct: 172 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 107/221 (48%), Gaps = 34/221 (15%)
Query: 28 VRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTG-LLGWEMRVRILEGVAQGLLYLHH 86
V +G G+ + E M + SLD F G + ++ +I + + L +LH
Sbjct: 113 VTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH- 170
Query: 87 YSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI-VGTYGYMSPEYA 145
S+L VIHRD+K SN+L+++ K+ DFGI+ G + S K I G YM+PE
Sbjct: 171 -SKLSVIHRDVKPSNVLINALGQVKMCDFGIS----GYLVDSVAKTIDAGCKPYMAPERI 225
Query: 146 LRGL----FSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAWNLWNDGRAWELMD 201
L +S+KSD++S G+ ++E L +L ++ W G ++ +
Sbjct: 226 NPELNQKGYSVKSDIWSLGITMIE---------------LAILRFPYDSW--GTPFQQLK 268
Query: 202 SILQNDASYPMLNR----YINVALLCVQENAADRPTMLEVI 238
+++ + ++ +++ C+++N+ +RPT E++
Sbjct: 269 QVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELM 309
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 17/176 (9%)
Query: 7 QGLEEFKNEMMLIAKL-QHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGL- 64
+ L + +EM ++ + +H+N++ L G C + G +I Y +L +L G+
Sbjct: 82 KDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGME 141
Query: 65 ------------LGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKI 112
+ ++ V +A+G+ YL + + IHRDL A N+L+ N KI
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKI 198
Query: 113 SDFGIARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+DFG+AR + T +M+PE +++ +SDV+SFGVL+ E +
Sbjct: 199 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 105/241 (43%), Gaps = 18/241 (7%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
E+ L+ +L H N+++ + IE E ++ E L + K L E V
Sbjct: 81 KEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTV-- 138
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
+ Q L H RV+HRD+K +N+ + + K+ D G+ R F +++ +
Sbjct: 139 WKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--L 196
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAWNLWND 193
VGT YMSPE ++ KSD++S G L+ E + + + FY G NL++
Sbjct: 197 VGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ--SPFY--------GDKMNLYSL 246
Query: 194 GRAWELMD-SILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISMLTNENVILPSPL 252
+ E D L +D L + +N +C+ + RP + V + + S L
Sbjct: 247 CKKIEQCDYPPLPSDHYSEELRQLVN---MCINPDPEKRPDVTYVYDVAKRMHACTASSL 303
Query: 253 Q 253
+
Sbjct: 304 E 304
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 77/162 (47%), Gaps = 13/162 (8%)
Query: 17 MLIAKLQHRNLVRLFGCCIEHGEKIL-IYEYMPNKSLDCFL------FDPTK---TGLLG 66
+LI H N+V L G C + G ++ I E+ +L +L F P K L
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLT 142
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL 126
E + VA+G+ +L + + IHRDL A NILL KI DFG+AR D
Sbjct: 143 LEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPD 199
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+M+PE +++I+SDV+SFGVL+ E S
Sbjct: 200 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 77/164 (46%), Gaps = 15/164 (9%)
Query: 17 MLIAKLQHRNLVRLFGCCIEHGEKIL-IYEYMPNKSLDCFL------FDPTK-----TGL 64
+LI H N+V L G C + G ++ I E+ +L +L F P K
Sbjct: 85 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDF 144
Query: 65 LGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGD 124
L E + VA+G+ +L + + IHRDL A NILL KI DFG+AR D
Sbjct: 145 LTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKD 201
Query: 125 ELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+M+PE +++I+SDV+SFGVL+ E S
Sbjct: 202 PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 78/159 (49%), Gaps = 7/159 (4%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
+F E ++ + H N+VRL G C + ++ E + + D F T+ L +
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELV--QGGDFLTFLRTEGARLRVKTL 215
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG-GDELQSN 129
++++ A G+ YL IHRDL A N L+ KISDFG++R G S
Sbjct: 216 LQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASG 272
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
R V + +PE G +S +SDV+SFG+L+ ET S
Sbjct: 273 GLRQV-PVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 96/180 (53%), Gaps = 23/180 (12%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLF-DP 59
+++ + Q L+ FKNE+ ++ K +H N++ G + + ++ ++ SL L
Sbjct: 56 VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASE 114
Query: 60 TKTGLLGWEMR--VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGI 117
TK +EM+ + I A+G+ YLH S +IHRDLK++NI L + KI DFG+
Sbjct: 115 TK-----FEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGL 166
Query: 118 A----RLFGGDELQSNTKRIVGTYGYMSPEYAL---RGLFSIKSDVFSFGVLVLETLSSK 170
A R G + + ++ G+ +M+PE +S +SDV++FG+++ E ++ +
Sbjct: 167 ATEKSRWSGSHQFE----QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 108/273 (39%), Gaps = 59/273 (21%)
Query: 8 GLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL-----FDPTK 61
G+E + + E+ + + L+H N++RL+G + LI EY P + L FD +
Sbjct: 55 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQR 114
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
T E+ A L Y H RVIHRD+K N+LL S KI+DFG +
Sbjct: 115 TATYITEL--------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----W 159
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKK--NAHFYNTD 179
S + GT Y+ PE + K D++S GVL E L K A+ Y
Sbjct: 160 SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ-- 217
Query: 180 SLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVIS 239
E I + + ++P V E A D +IS
Sbjct: 218 ------------------ETYKRISRVEFTFPDF----------VTEGARD------LIS 243
Query: 240 MLTNENVILPSPLQPAFSHVRIAENSSLPANCE 272
L N L+ H I NSS P+NC+
Sbjct: 244 RLLKHNPSQRPMLREVLEHPWITANSSKPSNCQ 276
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 87/158 (55%), Gaps = 8/158 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
E+ L+ +L H N+V+L + L++E++ ++ L F+ TG+ ++ +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL 109
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
+ + QGL + H + RV+HRDLK N+L+++ K++DFG+AR FG +++ T +
Sbjct: 110 FQ-LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEV 164
Query: 134 VGTYGYMSPEYAL-RGLFSIKSDVFSFGVLVLETLSSK 170
V T Y +PE L +S D++S G + E ++ +
Sbjct: 165 V-TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 106/268 (39%), Gaps = 49/268 (18%)
Query: 8 GLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
G+E + + E+ + + L+H N++RL+G + LI EY P L + K
Sbjct: 50 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 106
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL 126
+ + +A L Y H RVIHRD+K N+LL S KI+DFG +
Sbjct: 107 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAP 159
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKK--NAHFYNTDSLTLL 184
S + GT Y+ PE + K D++S GVL E L K A+ Y
Sbjct: 160 SSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ------- 212
Query: 185 GHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISMLTNE 244
E I + + ++P V E A D +IS L
Sbjct: 213 -------------ETYKRISRVEFTFPDF----------VTEGARD------LISRLLKH 243
Query: 245 NVILPSPLQPAFSHVRIAENSSLPANCE 272
N L+ H I NSS P+NC+
Sbjct: 244 NPSQRPMLREVLEHPWITANSSKPSNCQ 271
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 108/273 (39%), Gaps = 59/273 (21%)
Query: 8 GLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFL-----FDPTK 61
G+E + + E+ + + L+H N++RL+G + LI EY P + L FD +
Sbjct: 55 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQR 114
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
T E+ A L Y H RVIHRD+K N+LL S KI+DFG +
Sbjct: 115 TATYITEL--------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----W 159
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKK--NAHFYNTD 179
S + GT Y+ PE + K D++S GVL E L K A+ Y
Sbjct: 160 SVHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ-- 217
Query: 180 SLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVIS 239
E I + + ++P V E A D +IS
Sbjct: 218 ------------------ETYKRISRVEFTFPDF----------VTEGARD------LIS 243
Query: 240 MLTNENVILPSPLQPAFSHVRIAENSSLPANCE 272
L N L+ H I NSS P+NC+
Sbjct: 244 RLLKHNPSQRPMLREVLEHPWITANSSKPSNCQ 276
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 77/166 (46%), Gaps = 17/166 (10%)
Query: 17 MLIAKLQHRNLVRLFGCCIEHGEKIL-IYEYMPNKSLDCFL------FDPTKTG------ 63
+LI H N+V L G C + G ++ I E+ +L +L F P K
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 142
Query: 64 -LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG 122
L E + VA+G+ +L + + IHRDL A NILL KI DFG+AR
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIX 199
Query: 123 GDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
D +M+PE +++I+SDV+SFGVL+ E S
Sbjct: 200 KDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 81/173 (46%), Gaps = 18/173 (10%)
Query: 5 SGQGLEEFKNEMMLIAKL-QHRNLVRLFGCCIEHG------EKILIYEYMPNKSLDCFLF 57
+G EE K E+ ++ K HRN+ +G I+ + L+ E+ S+ L
Sbjct: 60 TGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSV-TDLI 118
Query: 58 DPTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGI 117
TK L E I + +GL +LH + +VIHRD+K N+LL N K+ DFG+
Sbjct: 119 KNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGV 175
Query: 118 ARLFGGDELQSNTKRIVGTYGYMSPEYAL-----RGLFSIKSDVFSFGVLVLE 165
+ + NT +GT +M+PE + KSD++S G+ +E
Sbjct: 176 SAQLDRTVGRRNT--FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIE 226
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 95/180 (52%), Gaps = 23/180 (12%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLF-DP 59
+++ + Q L+ FKNE+ ++ K +H N++ G + ++ ++ SL L
Sbjct: 56 VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQWCEGSSLYHHLHASE 114
Query: 60 TKTGLLGWEMR--VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGI 117
TK +EM+ + I A+G+ YLH S +IHRDLK++NI L + KI DFG+
Sbjct: 115 TK-----FEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGL 166
Query: 118 A----RLFGGDELQSNTKRIVGTYGYMSPEYAL---RGLFSIKSDVFSFGVLVLETLSSK 170
A R G + + ++ G+ +M+PE +S +SDV++FG+++ E ++ +
Sbjct: 167 ATEKSRWSGSHQFE----QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 78/159 (49%), Gaps = 7/159 (4%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
+F E ++ + H N+VRL G C + ++ E + + D F T+ L +
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELV--QGGDFLTFLRTEGARLRVKTL 215
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG-GDELQSN 129
++++ A G+ YL IHRDL A N L+ KISDFG++R G S
Sbjct: 216 LQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASG 272
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
R V + +PE G +S +SDV+SFG+L+ ET S
Sbjct: 273 GLRQV-PVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 87/158 (55%), Gaps = 8/158 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
E+ L+ +L H N+V+L + L++E++ ++ L F+ TG+ ++ +
Sbjct: 58 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL 116
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
+ + QGL + H + RV+HRDLK N+L+++ K++DFG+AR FG +++ T +
Sbjct: 117 FQ-LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEV 171
Query: 134 VGTYGYMSPEYAL-RGLFSIKSDVFSFGVLVLETLSSK 170
V T Y +PE L +S D++S G + E ++ +
Sbjct: 172 V-TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 77/166 (46%), Gaps = 17/166 (10%)
Query: 17 MLIAKLQHRNLVRLFGCCIEHGEKIL-IYEYMPNKSLDCFL------FDPTKTG------ 63
+LI H N+V L G C + G ++ I E+ +L +L F P K
Sbjct: 74 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 133
Query: 64 -LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG 122
L E + VA+G+ +L + + IHRDL A NILL KI DFG+AR
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIX 190
Query: 123 GDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
D +M+PE +++I+SDV+SFGVL+ E S
Sbjct: 191 KDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 106/268 (39%), Gaps = 49/268 (18%)
Query: 8 GLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
G+E + + E+ + + L+H N++RL+G + LI EY P L + K
Sbjct: 51 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 107
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL 126
+ + +A L Y H RVIHRD+K N+LL S KI+DFG +
Sbjct: 108 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAP 160
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKK--NAHFYNTDSLTLL 184
S + GT Y+ PE + K D++S GVL E L K A+ Y
Sbjct: 161 SSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ------- 213
Query: 185 GHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISMLTNE 244
E I + + ++P V E A D +IS L
Sbjct: 214 -------------ETYKRISRVEFTFPDF----------VTEGARD------LISRLLKH 244
Query: 245 NVILPSPLQPAFSHVRIAENSSLPANCE 272
N L+ H I NSS P+NC+
Sbjct: 245 NPSQRPMLREVLEHPWITANSSKPSNCQ 272
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 77/166 (46%), Gaps = 17/166 (10%)
Query: 17 MLIAKLQHRNLVRLFGCCIEHGEKIL-IYEYMPNKSLDCFL------FDPTKTG------ 63
+LI H N+V L G C + G ++ I E+ +L +L F P K
Sbjct: 74 ILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 133
Query: 64 -LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG 122
L E + VA+G+ +L + + IHRDL A NILL KI DFG+AR
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIX 190
Query: 123 GDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
D +M+PE +++I+SDV+SFGVL+ E S
Sbjct: 191 KDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 106/268 (39%), Gaps = 49/268 (18%)
Query: 8 GLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
G+E + + E+ + + L+H N++RL+G + LI EY P L + K
Sbjct: 52 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 108
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL 126
+ + +A L Y H RVIHRD+K N+LL S KI+DFG +
Sbjct: 109 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAP 161
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKK--NAHFYNTDSLTLL 184
S + GT Y+ PE + K D++S GVL E L K A+ Y
Sbjct: 162 SSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ------- 214
Query: 185 GHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISMLTNE 244
E I + + ++P V E A D +IS L
Sbjct: 215 -------------ETYKRISRVEFTFPDF----------VTEGARD------LISRLLKH 245
Query: 245 NVILPSPLQPAFSHVRIAENSSLPANCE 272
N L+ H I NSS P+NC+
Sbjct: 246 NPSQRPMLREVLEHPWITANSSKPSNCQ 273
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 87/158 (55%), Gaps = 8/158 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
E+ L+ +L H N+V+L + L++E++ ++ L F+ TG+ ++ +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL 109
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
+ + QGL + H + RV+HRDLK N+L+++ K++DFG+AR FG +++ T +
Sbjct: 110 FQ-LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEV 164
Query: 134 VGTYGYMSPEYALR-GLFSIKSDVFSFGVLVLETLSSK 170
V T Y +PE L +S D++S G + E ++ +
Sbjct: 165 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 87/158 (55%), Gaps = 8/158 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
E+ L+ +L H N+V+L + L++E++ ++ L F+ TG+ ++ +
Sbjct: 50 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL 108
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
+ + QGL + H + RV+HRDLK N+L+++ K++DFG+AR FG +++ T +
Sbjct: 109 FQ-LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEV 163
Query: 134 VGTYGYMSPEYALR-GLFSIKSDVFSFGVLVLETLSSK 170
V T Y +PE L +S D++S G + E ++ +
Sbjct: 164 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 77/162 (47%), Gaps = 13/162 (8%)
Query: 17 MLIAKLQHRNLVRLFGCCIEHGEKIL-IYEYMPNKSLDCFL------FDPTK---TGLLG 66
+LI H N+V L G C + G ++ I E+ +L +L F P K L
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLT 142
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL 126
E + VA+G+ +L + + IHRDL A NILL KI DFG+AR D
Sbjct: 143 LEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 199
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+M+PE +++I+SDV+SFGVL+ E S
Sbjct: 200 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 87/158 (55%), Gaps = 8/158 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
E+ L+ +L H N+V+L + L++E++ ++ L F+ TG+ ++ +
Sbjct: 50 REISLLKELNHPNIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYL 108
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
+ + QGL + H + RV+HRDLK N+L+++ K++DFG+AR FG +++ T +
Sbjct: 109 FQ-LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEV 163
Query: 134 VGTYGYMSPEYALR-GLFSIKSDVFSFGVLVLETLSSK 170
V T Y +PE L +S D++S G + E ++ +
Sbjct: 164 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 106/268 (39%), Gaps = 49/268 (18%)
Query: 8 GLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
G+E + + E+ + + L+H N++RL+G + LI EY P L + K
Sbjct: 50 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 106
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL 126
+ + +A L Y H RVIHRD+K N+LL S KI+DFG +
Sbjct: 107 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAP 159
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKK--NAHFYNTDSLTLL 184
S + GT Y+ PE + K D++S GVL E L K A+ Y
Sbjct: 160 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ------- 212
Query: 185 GHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISMLTNE 244
E I + + ++P V E A D +IS L
Sbjct: 213 -------------ETYKRISRVEFTFPDF----------VTEGARD------LISRLLKH 243
Query: 245 NVILPSPLQPAFSHVRIAENSSLPANCE 272
N L+ H I NSS P+NC+
Sbjct: 244 NPSQRPMLREVLEHPWITANSSKPSNCQ 271
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 106/268 (39%), Gaps = 49/268 (18%)
Query: 8 GLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
G+E + + E+ + + L+H N++RL+G + LI EY P L + K
Sbjct: 55 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 111
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL 126
+ + +A L Y H RVIHRD+K N+LL S KI+DFG +
Sbjct: 112 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAP 164
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKK--NAHFYNTDSLTLL 184
S + GT Y+ PE + K D++S GVL E L K A+ Y
Sbjct: 165 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ------- 217
Query: 185 GHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISMLTNE 244
E I + + ++P V E A D +IS L
Sbjct: 218 -------------ETYKRISRVEFTFPDF----------VTEGARD------LISRLLKH 248
Query: 245 NVILPSPLQPAFSHVRIAENSSLPANCE 272
N L+ H I NSS P+NC+
Sbjct: 249 NPSQRPMLREVLEHPWITANSSKPSNCQ 276
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 87/158 (55%), Gaps = 8/158 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
E+ L+ +L H N+V+L + L++E++ ++ L F+ TG+ ++ +
Sbjct: 50 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL 108
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
+ + QGL + H + RV+HRDLK N+L+++ K++DFG+AR FG +++ T +
Sbjct: 109 FQ-LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEV 163
Query: 134 VGTYGYMSPEYALR-GLFSIKSDVFSFGVLVLETLSSK 170
V T Y +PE L +S D++S G + E ++ +
Sbjct: 164 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 87/158 (55%), Gaps = 8/158 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
E+ L+ +L H N+V+L + L++E++ ++ L F+ TG+ ++ +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL 109
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
+ + QGL + H + RV+HRDLK N+L+++ K++DFG+AR FG +++ T +
Sbjct: 110 FQ-LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEV 164
Query: 134 VGTYGYMSPEYALR-GLFSIKSDVFSFGVLVLETLSSK 170
V T Y +PE L +S D++S G + E ++ +
Sbjct: 165 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 87/158 (55%), Gaps = 8/158 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
E+ L+ +L H N+V+L + L++E++ ++ L F+ TG+ ++ +
Sbjct: 50 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL 108
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
+ + QGL + H + RV+HRDLK N+L+++ K++DFG+AR FG +++ T +
Sbjct: 109 FQ-LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEV 163
Query: 134 VGTYGYMSPEYALR-GLFSIKSDVFSFGVLVLETLSSK 170
V T Y +PE L +S D++S G + E ++ +
Sbjct: 164 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 106/268 (39%), Gaps = 49/268 (18%)
Query: 8 GLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
G+E + + E+ + + L+H N++RL+G + LI EY P L + K
Sbjct: 53 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 109
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL 126
+ + +A L Y H RVIHRD+K N+LL S KI+DFG +
Sbjct: 110 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAP 162
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKK--NAHFYNTDSLTLL 184
S + GT Y+ PE + K D++S GVL E L K A+ Y
Sbjct: 163 SSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ------- 215
Query: 185 GHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISMLTNE 244
E I + + ++P V E A D +IS L
Sbjct: 216 -------------ETYKRISRVEFTFPDF----------VTEGARD------LISRLLKH 246
Query: 245 NVILPSPLQPAFSHVRIAENSSLPANCE 272
N L+ H I NSS P+NC+
Sbjct: 247 NPSQRPMLREVLEHPWITANSSKPSNCQ 274
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 87/158 (55%), Gaps = 8/158 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
E+ L+ +L H N+V+L + L++E++ ++ L F+ TG+ ++ +
Sbjct: 55 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL 113
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
+ + QGL + H + RV+HRDLK N+L+++ K++DFG+AR FG +++ T +
Sbjct: 114 FQ-LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEV 168
Query: 134 VGTYGYMSPEYALR-GLFSIKSDVFSFGVLVLETLSSK 170
V T Y +PE L +S D++S G + E ++ +
Sbjct: 169 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 106/268 (39%), Gaps = 49/268 (18%)
Query: 8 GLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
G+E + + E+ + + L+H N++RL+G + LI EY P L + K
Sbjct: 51 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 107
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL 126
+ + +A L Y H RVIHRD+K N+LL S KI+DFG +
Sbjct: 108 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAP 160
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKK--NAHFYNTDSLTLL 184
S + GT Y+ PE + K D++S GVL E L K A+ Y
Sbjct: 161 SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ------- 213
Query: 185 GHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISMLTNE 244
E I + + ++P V E A D +IS L
Sbjct: 214 -------------ETYKRISRVEFTFPDF----------VTEGARD------LISRLLKH 244
Query: 245 NVILPSPLQPAFSHVRIAENSSLPANCE 272
N L+ H I NSS P+NC+
Sbjct: 245 NPSQRPMLREVLEHPWITANSSKPSNCQ 272
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 82/158 (51%), Gaps = 15/158 (9%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRV-RI 73
E+ L+ +L H N+++L+ + G L+ E L FD + E+ RI
Sbjct: 76 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARI 131
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDS---NMNPKISDFGIARLFGGDELQSNT 130
+ V G+ Y+H + +++HRDLK N+LL+S + N +I DFG++ F E
Sbjct: 132 IRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKM 185
Query: 131 KRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
K +GT Y++PE L G + K DV+S GV++ LS
Sbjct: 186 KDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLS 222
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 87/158 (55%), Gaps = 8/158 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
E+ L+ +L H N+V+L + L++E++ ++ L F+ TG+ ++ +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL 109
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
+ + QGL + H + RV+HRDLK N+L+++ K++DFG+AR FG +++ T +
Sbjct: 110 FQ-LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEV 164
Query: 134 VGTYGYMSPEYALR-GLFSIKSDVFSFGVLVLETLSSK 170
V T Y +PE L +S D++S G + E ++ +
Sbjct: 165 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 21/169 (12%)
Query: 12 FKNEMMLIAKLQHRNLVRLFGCCIEHGE--------KILIYEYMPNKSLDCFLFDPTKTG 63
F+ E A L H +V ++ GE ++ EY+ +L + G
Sbjct: 59 FRREAQNAAALNHPAIVAVYAT----GEAETPAGPLPYIVMEYVDGVTLRDIVH---TEG 111
Query: 64 LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG- 122
+ + + ++ Q L + H +IHRD+K +NI++ + K+ DFGIAR
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIAD 168
Query: 123 -GDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
G+ + + T ++GT Y+SPE A +SDV+S G ++ E L+ +
Sbjct: 169 SGNSV-TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 106/268 (39%), Gaps = 49/268 (18%)
Query: 8 GLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
G+E + + E+ + + L+H N++RL+G + LI EY P L + K
Sbjct: 53 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 109
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL 126
+ + +A L Y H RVIHRD+K N+LL S KI+DFG +
Sbjct: 110 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAP 162
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKK--NAHFYNTDSLTLL 184
S + GT Y+ PE + K D++S GVL E L K A+ Y
Sbjct: 163 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ------- 215
Query: 185 GHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISMLTNE 244
E I + + ++P V E A D +IS L
Sbjct: 216 -------------ETYKRISRVEFTFPDF----------VTEGARD------LISRLLKH 246
Query: 245 NVILPSPLQPAFSHVRIAENSSLPANCE 272
N L+ H I NSS P+NC+
Sbjct: 247 NPSQRPMLREVLEHPWITANSSKPSNCQ 274
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 87/158 (55%), Gaps = 8/158 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
E+ L+ +L H N+V+L + L++E++ ++ L F+ TG+ ++ +
Sbjct: 52 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL 110
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
+ + QGL + H + RV+HRDLK N+L+++ K++DFG+AR FG +++ T +
Sbjct: 111 FQ-LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEV 165
Query: 134 VGTYGYMSPEYALR-GLFSIKSDVFSFGVLVLETLSSK 170
V T Y +PE L +S D++S G + E ++ +
Sbjct: 166 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 87/158 (55%), Gaps = 8/158 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
E+ L+ +L H N+V+L + L++E++ ++ L F+ TG+ ++ +
Sbjct: 58 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL 116
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
+ + QGL + H + RV+HRDLK N+L+++ K++DFG+AR FG +++ T +
Sbjct: 117 FQ-LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEV 171
Query: 134 VGTYGYMSPEYALR-GLFSIKSDVFSFGVLVLETLSSK 170
V T Y +PE L +S D++S G + E ++ +
Sbjct: 172 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 108/277 (38%), Gaps = 49/277 (17%)
Query: 8 GLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
G+E + + E+ + + L+H N++RL+G + LI EY P L + K
Sbjct: 50 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 106
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL 126
+ + +A L Y H RVIHRD+K N+LL S KI+DFG +
Sbjct: 107 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAP 159
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKK--NAHFYNTDSLTLL 184
S + GT Y+ PE + K D++S GVL E L K A+ Y
Sbjct: 160 SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ------- 212
Query: 185 GHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISMLTNE 244
E I + + ++P V E A D +IS L
Sbjct: 213 -------------ETYKRISRVEFTFPDF----------VTEGARD------LISRLLKH 243
Query: 245 NVILPSPLQPAFSHVRIAENSSLPANCEVEACTVNCL 281
N L+ H I NSS P+NC+ + L
Sbjct: 244 NPSQRPMLREVLEHPWITANSSKPSNCQNKESAAAAL 280
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 77/166 (46%), Gaps = 17/166 (10%)
Query: 17 MLIAKLQHRNLVRLFGCCIEHGEKIL-IYEYMPNKSLDCFL------FDPTKTG------ 63
+LI H N+V L G C + G ++ I E+ +L +L F P K
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 142
Query: 64 -LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG 122
L E + VA+G+ +L + + IHRDL A NILL KI DFG+AR
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 199
Query: 123 GDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
D +M+PE +++I+SDV+SFGVL+ E S
Sbjct: 200 KDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 106/268 (39%), Gaps = 49/268 (18%)
Query: 8 GLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
G+E + + E+ + + L+H N++RL+G + LI EY P L + K
Sbjct: 55 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 111
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL 126
+ + +A L Y H RVIHRD+K N+LL S KI+DFG +
Sbjct: 112 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAP 164
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKK--NAHFYNTDSLTLL 184
S + GT Y+ PE + K D++S GVL E L K A+ Y
Sbjct: 165 SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ------- 217
Query: 185 GHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISMLTNE 244
E I + + ++P V E A D +IS L
Sbjct: 218 -------------ETYKRISRVEFTFPDF----------VTEGARD------LISRLLKH 248
Query: 245 NVILPSPLQPAFSHVRIAENSSLPANCE 272
N L+ H I NSS P+NC+
Sbjct: 249 NPSQRPMLREVLEHPWITANSSKPSNCQ 276
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 106/268 (39%), Gaps = 49/268 (18%)
Query: 8 GLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
G+E + + E+ + + L+H N++RL+G + LI EY P L + K
Sbjct: 50 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 106
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL 126
+ + +A L Y H RVIHRD+K N+LL S KI+DFG +
Sbjct: 107 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAP 159
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKK--NAHFYNTDSLTLL 184
S + GT Y+ PE + K D++S GVL E L K A+ Y
Sbjct: 160 SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ------- 212
Query: 185 GHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISMLTNE 244
E I + + ++P V E A D +IS L
Sbjct: 213 -------------ETYKRISRVEFTFPDF----------VTEGARD------LISRLLKH 243
Query: 245 NVILPSPLQPAFSHVRIAENSSLPANCE 272
N L+ H I NSS P+NC+
Sbjct: 244 NPSQRPMLREVLEHPWITANSSKPSNCQ 271
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 82/158 (51%), Gaps = 15/158 (9%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRV-RI 73
E+ L+ +L H N+++L+ + G L+ E L FD + E+ RI
Sbjct: 100 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARI 155
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDS---NMNPKISDFGIARLFGGDELQSNT 130
+ V G+ Y+H + +++HRDLK N+LL+S + N +I DFG++ F E
Sbjct: 156 IRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKM 209
Query: 131 KRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
K +GT Y++PE L G + K DV+S GV++ LS
Sbjct: 210 KDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLS 246
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 106/268 (39%), Gaps = 49/268 (18%)
Query: 8 GLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
G+E + + E+ + + L+H N++RL+G + LI EY P L + K
Sbjct: 67 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 123
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL 126
+ + +A L Y H RVIHRD+K N+LL S KI+DFG +
Sbjct: 124 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAP 176
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKK--NAHFYNTDSLTLL 184
S + GT Y+ PE + K D++S GVL E L K A+ Y
Sbjct: 177 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ------- 229
Query: 185 GHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISMLTNE 244
E I + + ++P V E A D +IS L
Sbjct: 230 -------------ETYKRISRVEFTFPDF----------VTEGARD------LISRLLKH 260
Query: 245 NVILPSPLQPAFSHVRIAENSSLPANCE 272
N L+ H I NSS P+NC+
Sbjct: 261 NPSQRPMLREVLEHPWITANSSKPSNCQ 288
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 105/268 (39%), Gaps = 49/268 (18%)
Query: 8 GLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
G+E + + E+ + + L+H N++RL+G + LI EY P L + K
Sbjct: 55 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 111
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL 126
+ + +A L Y H RVIHRD+K N+LL S KI+DFG +
Sbjct: 112 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAP 164
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKK--NAHFYNTDSLTLL 184
S + GT Y+ PE K D++S GVL E L K A+ Y
Sbjct: 165 SSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ------- 217
Query: 185 GHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISMLTNE 244
E I + + ++P V E A D +IS L
Sbjct: 218 -------------ETYKRISRVEFTFPDF----------VTEGARD------LISRLLKH 248
Query: 245 NVILPSPLQPAFSHVRIAENSSLPANCE 272
N L+ H I NSS P+NC+
Sbjct: 249 NPSQRPXLREVLEHPWITANSSKPSNCQ 276
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 82/158 (51%), Gaps = 15/158 (9%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRV-RI 73
E+ L+ +L H N+++L+ + G L+ E L FD + E+ RI
Sbjct: 99 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARI 154
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDS---NMNPKISDFGIARLFGGDELQSNT 130
+ V G+ Y+H + +++HRDLK N+LL+S + N +I DFG++ F E
Sbjct: 155 IRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKM 208
Query: 131 KRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
K +GT Y++PE L G + K DV+S GV++ LS
Sbjct: 209 KDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLS 245
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 106/268 (39%), Gaps = 49/268 (18%)
Query: 8 GLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
G+E + + E+ + + L+H N++RL+G + LI EY P L + K
Sbjct: 76 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 132
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL 126
+ + +A L Y H RVIHRD+K N+LL S KI+DFG +
Sbjct: 133 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAP 185
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKK--NAHFYNTDSLTLL 184
S + GT Y+ PE + K D++S GVL E L K A+ Y
Sbjct: 186 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ------- 238
Query: 185 GHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISMLTNE 244
E I + + ++P V E A D +IS L
Sbjct: 239 -------------ETYKRISRVEFTFPDF----------VTEGARD------LISRLLKH 269
Query: 245 NVILPSPLQPAFSHVRIAENSSLPANCE 272
N L+ H I NSS P+NC+
Sbjct: 270 NPSQRPMLREVLEHPWITANSSKPSNCQ 297
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 18/161 (11%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILI-YEYMPNKSLDCFL-----FDPTKTGLLGW 67
E ++++L H V+L+ C + EK+ Y N L ++ FD T T
Sbjct: 86 RERDVMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 144
Query: 68 EMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQ 127
E + L YLH +IHRDLK NILL+ +M+ +I+DFG A++ + Q
Sbjct: 145 E--------IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 193
Query: 128 SNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+ VGT Y+SPE SD+++ G ++ + ++
Sbjct: 194 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 234
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 21/169 (12%)
Query: 12 FKNEMMLIAKLQHRNLVRLFGCCIEHGE--------KILIYEYMPNKSLDCFLFDPTKTG 63
F+ E A L H +V ++ + GE ++ EY+ +L + G
Sbjct: 59 FRREAQNAAALNHPAIVAVY----DTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEG 111
Query: 64 LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG- 122
+ + + ++ Q L + H +IHRD+K +NIL+ + K+ DFGIAR
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIAD 168
Query: 123 -GDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
G+ + T ++GT Y+SPE A +SDV+S G ++ E L+ +
Sbjct: 169 SGNSV-XQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 77/166 (46%), Gaps = 17/166 (10%)
Query: 17 MLIAKLQHRNLVRLFGCCIEHGEKIL-IYEYMPNKSLDCFL------FDPTKTG------ 63
+LI H N+V L G C + G ++ I E+ +L +L F P K
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 142
Query: 64 -LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG 122
L E + VA+G+ +L + + IHRDL A NILL KI DFG+AR
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 199
Query: 123 GDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
D +M+PE +++I+SDV+SFGVL+ E S
Sbjct: 200 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 87/158 (55%), Gaps = 8/158 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
E+ L+ +L H N+V+L + L++E++ ++ L F+ TG+ ++ +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL 109
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
+ + QGL + H + RV+HRDLK N+L+++ K++DFG+AR FG +++ T +
Sbjct: 110 FQ-LLQGLSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEV 164
Query: 134 VGTYGYMSPEYALR-GLFSIKSDVFSFGVLVLETLSSK 170
V T Y +PE L +S D++S G + E ++ +
Sbjct: 165 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
+ + E+ + +H ++++L+ + ++ EY+ L ++ K G L +
Sbjct: 62 KIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYI---CKNGRLDEKES 118
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNT 130
R+ + + G+ Y H R V+HRDLK N+LLD++MN KI+DFG++ + E +
Sbjct: 119 RRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXS 175
Query: 131 KRIVGTYGYMSPEYALRGLFS-IKSDVFSFGVLVLETL 167
G+ Y +PE L++ + D++S GV++ L
Sbjct: 176 ---CGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALL 210
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 21/169 (12%)
Query: 12 FKNEMMLIAKLQHRNLVRLFGCCIEHGE--------KILIYEYMPNKSLDCFLFDPTKTG 63
F+ E A L H +V ++ + GE ++ EY+ +L + G
Sbjct: 59 FRREAQNAAALNHPAIVAVY----DTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEG 111
Query: 64 LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG- 122
+ + + ++ Q L + H +IHRD+K +NI++ + K+ DFGIAR
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIAD 168
Query: 123 -GDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
G+ + + T ++GT Y+SPE A +SDV+S G ++ E L+ +
Sbjct: 169 SGNSV-TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 21/169 (12%)
Query: 12 FKNEMMLIAKLQHRNLVRLFGCCIEHGE--------KILIYEYMPNKSLDCFLFDPTKTG 63
F+ E A L H +V ++ + GE ++ EY+ +L + G
Sbjct: 59 FRREAQNAAALNHPAIVAVY----DTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEG 111
Query: 64 LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG- 122
+ + + ++ Q L + H +IHRD+K +NI++ + K+ DFGIAR
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIAD 168
Query: 123 -GDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
G+ + + T ++GT Y+SPE A +SDV+S G ++ E L+ +
Sbjct: 169 SGNSV-TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 27/237 (11%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E+F +E +++ L H ++V+L G IE +I E P L +L + K L +
Sbjct: 58 EKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYL-ERNKNSLKVLTL 115
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF-GGDELQS 128
+ L+ + + + YL + +HRD+ NIL+ S K+ DFG++R D ++
Sbjct: 116 VLYSLQ-ICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKA 171
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFY--NTDSLTLLGH 186
+ R+ +MSPE F+ SDV+ F V + E LS K F+ N D + +L
Sbjct: 172 SVTRL--PIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVL-- 227
Query: 187 AWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISMLTN 243
E D + + D P+L + C + +DRP E++ L++
Sbjct: 228 -----------EKGDRLPKPDLCPPVL---YTLMTRCWDYDPSDRPRFTELVCSLSD 270
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 106/268 (39%), Gaps = 49/268 (18%)
Query: 8 GLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
G+E + + E+ + + L+H N++RL+G + LI EY P L + K
Sbjct: 76 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 132
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL 126
+ + +A L Y H RVIHRD+K N+LL S KI+DFG +
Sbjct: 133 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAP 185
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKK--NAHFYNTDSLTLL 184
S + GT Y+ PE + K D++S GVL E L K A+ Y
Sbjct: 186 SSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ------- 238
Query: 185 GHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISMLTNE 244
E I + + ++P V E A D +IS L
Sbjct: 239 -------------ETYKRISRVEFTFPDF----------VTEGARD------LISRLLKH 269
Query: 245 NVILPSPLQPAFSHVRIAENSSLPANCE 272
N L+ H I NSS P+NC+
Sbjct: 270 NPSQRPMLREVLEHPWITANSSKPSNCQ 297
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 104/220 (47%), Gaps = 32/220 (14%)
Query: 28 VRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTG-LLGWEMRVRILEGVAQGLLYLHH 86
V +G G+ + E M + SLD F G + ++ +I + + L +LH
Sbjct: 69 VTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH- 126
Query: 87 YSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGTYGYMSPEYAL 146
S+L VIHRD+K SN+L+++ K+ DFGI+ D + G YM+PE
Sbjct: 127 -SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID---AGCKPYMAPERIN 182
Query: 147 RGL----FSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAWNLWNDGRAWELMDS 202
L +S+KSD++S G+ ++E L +L ++ W G ++ +
Sbjct: 183 PELNQKGYSVKSDIWSLGITMIE---------------LAILRFPYDSW--GTPFQQLKQ 225
Query: 203 ILQNDASYPMLNR----YINVALLCVQENAADRPTMLEVI 238
+++ + ++ +++ C+++N+ +RPT E++
Sbjct: 226 VVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELM 265
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 21/169 (12%)
Query: 12 FKNEMMLIAKLQHRNLVRLFGCCIEHGE--------KILIYEYMPNKSLDCFLFDPTKTG 63
F+ E A L H +V ++ + GE ++ EY+ +L + G
Sbjct: 59 FRREAQNAAALNHPAIVAVY----DTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEG 111
Query: 64 LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG- 122
+ + + ++ Q L + H +IHRD+K +NI++ + K+ DFGIAR
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIAD 168
Query: 123 -GDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
G+ + + T ++GT Y+SPE A +SDV+S G ++ E L+ +
Sbjct: 169 SGNSV-TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 79/161 (49%), Gaps = 9/161 (5%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
EE E ++ +L + +VRL G C + +L+ E L FL K +
Sbjct: 55 EEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLV--GKREEIPVSN 111
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN 129
+L V+ G+ YL + +HRDL A N+LL + KISDFG+++ G D+
Sbjct: 112 VAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGADD-SYY 167
Query: 130 TKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
T R G + + +PE FS +SDV+S+GV + E LS
Sbjct: 168 TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 27/237 (11%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E+F +E +++ L H ++V+L G IE +I E P L +L + K L +
Sbjct: 54 EKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYL-ERNKNSLKVLTL 111
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF-GGDELQS 128
+ L+ + + + YL + +HRD+ NIL+ S K+ DFG++R D ++
Sbjct: 112 VLYSLQ-ICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKA 167
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFY--NTDSLTLLGH 186
+ R+ +MSPE F+ SDV+ F V + E LS K F+ N D + +L
Sbjct: 168 SVTRL--PIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVL-- 223
Query: 187 AWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISMLTN 243
E D + + D P+L + C + +DRP E++ L++
Sbjct: 224 -----------EKGDRLPKPDLCPPVL---YTLMTRCWDYDPSDRPRFTELVCSLSD 266
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 27/237 (11%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E+F +E +++ L H ++V+L G IE +I E P L +L + K L +
Sbjct: 70 EKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYL-ERNKNSLKVLTL 127
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF-GGDELQS 128
+ L+ + + + YL + +HRD+ NIL+ S K+ DFG++R D ++
Sbjct: 128 VLYSLQ-ICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKA 183
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFY--NTDSLTLLGH 186
+ R+ +MSPE F+ SDV+ F V + E LS K F+ N D + +L
Sbjct: 184 SVTRL--PIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVL-- 239
Query: 187 AWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISMLTN 243
E D + + D P+L + C + +DRP E++ L++
Sbjct: 240 -----------EKGDRLPKPDLCPPVL---YTLMTRCWDYDPSDRPRFTELVCSLSD 282
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 77/166 (46%), Gaps = 17/166 (10%)
Query: 17 MLIAKLQHRNLVRLFGCCIEHGEKIL-IYEYMPNKSLDCFL------FDPTKTG------ 63
+LI H N+V L G C + G ++ I E+ +L +L F P K
Sbjct: 74 ILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 133
Query: 64 -LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG 122
L E + VA+G+ +L + + IHRDL A NILL KI DFG+AR
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 190
Query: 123 GDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
D +M+PE +++I+SDV+SFGVL+ E S
Sbjct: 191 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 83/163 (50%), Gaps = 15/163 (9%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E E+ L+ +L H N+++L+ + G L+ E L FD + E+
Sbjct: 77 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEV 132
Query: 70 -RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDS---NMNPKISDFGIARLFGGDE 125
RI+ V G+ Y+H + +++HRDLK N+LL+S + N +I DFG++ F E
Sbjct: 133 DAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---E 186
Query: 126 LQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
K +GT Y++PE L G + K DV+S GV++ LS
Sbjct: 187 ASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLS 228
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 77/166 (46%), Gaps = 17/166 (10%)
Query: 17 MLIAKLQHRNLVRLFGCCIEHGEKIL-IYEYMPNKSLDCFL------FDPTKTG------ 63
+LI H N+V L G C + G ++ I E+ +L +L F P K
Sbjct: 74 ILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 133
Query: 64 -LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG 122
L E + VA+G+ +L + + IHRDL A NILL KI DFG+AR
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 190
Query: 123 GDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
D +M+PE +++I+SDV+SFGVL+ E S
Sbjct: 191 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 77/166 (46%), Gaps = 17/166 (10%)
Query: 17 MLIAKLQHRNLVRLFGCCIEHGEKIL-IYEYMPNKSLDCFL------FDPTKTG------ 63
+LI H N+V L G C + G ++ I E+ +L +L F P K
Sbjct: 85 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYK 144
Query: 64 -LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG 122
L E + VA+G+ +L + + IHRDL A NILL KI DFG+AR
Sbjct: 145 DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 201
Query: 123 GDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
D +M+PE +++I+SDV+SFGVL+ E S
Sbjct: 202 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 26/168 (15%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPN---KSLDCFLFDPTKTGL------- 64
E+ L+ +L+H N+VRL+ + L++E+M N K +D T GL
Sbjct: 53 EISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKY 112
Query: 65 LGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGD 124
W++ QGL + H +++HRDLK N+L++ K+ DFG+AR FG
Sbjct: 113 FQWQL--------LQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG-- 159
Query: 125 ELQSNT-KRIVGTYGYMSPEYALRG-LFSIKSDVFSFGVLVLETLSSK 170
+ NT V T Y +P+ + +S D++S G ++ E ++ K
Sbjct: 160 -IPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 77/166 (46%), Gaps = 17/166 (10%)
Query: 17 MLIAKLQHRNLVRLFGCCIEHGEKIL-IYEYMPNKSLDCFL------FDPTKTG------ 63
+LI H N+V L G C + G ++ I E+ +L +L F P K
Sbjct: 120 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 179
Query: 64 -LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG 122
L E + VA+G+ +L + + IHRDL A NILL KI DFG+AR
Sbjct: 180 DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 236
Query: 123 GDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
D +M+PE +++I+SDV+SFGVL+ E S
Sbjct: 237 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 80/158 (50%), Gaps = 15/158 (9%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRV-RI 73
E+ L+ +L H N+ +L+ + G L+ E L FD + E+ RI
Sbjct: 76 EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARI 131
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDS---NMNPKISDFGIARLFGGDELQSNT 130
+ V G+ Y H + +++HRDLK N+LL+S + N +I DFG++ F E
Sbjct: 132 IRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKX 185
Query: 131 KRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
K +GT Y++PE L G + K DV+S GV++ LS
Sbjct: 186 KDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLS 222
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 86/158 (54%), Gaps = 8/158 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
E+ L+ +L H N+V+L + L++E++ ++ L F+ TG+ ++ +
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYL 112
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
+ + QGL + H + RV+HRDLK N+L+++ K++DFG+AR FG +++ +
Sbjct: 113 FQ-LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEV 167
Query: 134 VGTYGYMSPEYALR-GLFSIKSDVFSFGVLVLETLSSK 170
V T Y +PE L +S D++S G + E ++ +
Sbjct: 168 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA-RLFGGDELQSNTKRIVG 135
AQ + L H + +I+RDLK N+LLD + N +ISD G+A L G Q+ TK G
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG---QTKTKGYAG 351
Query: 136 TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
T G+M+PE L + D F+ GV + E ++++
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 21/169 (12%)
Query: 12 FKNEMMLIAKLQHRNLVRLFGCCIEHGE--------KILIYEYMPNKSLDCFLFDPTKTG 63
F+ E A L H +V ++ + GE ++ EY+ +L + G
Sbjct: 76 FRREAQNAAALNHPAIVAVY----DTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEG 128
Query: 64 LLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG- 122
+ + + ++ Q L + H +IHRD+K +NI++ + K+ DFGIAR
Sbjct: 129 PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIAD 185
Query: 123 -GDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
G+ + + T ++GT Y+SPE A +SDV+S G ++ E L+ +
Sbjct: 186 SGNSV-TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 233
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA-RLFGGDELQSNTKRIVG 135
AQ + L H + +I+RDLK N+LLD + N +ISD G+A L G Q+ TK G
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG---QTKTKGYAG 351
Query: 136 TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
T G+M+PE L + D F+ GV + E ++++
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA-RLFGGDELQSNTKRIVG 135
AQ + L H + +I+RDLK N+LLD + N +ISD G+A L G Q+ TK G
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG---QTKTKGYAG 351
Query: 136 TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
T G+M+PE L + D F+ GV + E ++++
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA-RLFGGDELQSNTKRIVG 135
AQ + L H + +I+RDLK N+LLD + N +ISD G+A L G Q+ TK G
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG---QTKTKGYAG 351
Query: 136 TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
T G+M+PE L + D F+ GV + E ++++
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 75/161 (46%), Gaps = 11/161 (6%)
Query: 8 GLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
G+E + + E+ + + L+H N++RL+G + LI EY P L + K
Sbjct: 54 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSRFD 110
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL 126
+ + +A L Y H RVIHRD+K N+LL SN KI+DFG +
Sbjct: 111 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFG----WSVHAP 163
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETL 167
S + GT Y+ PE + K D++S GVL E L
Sbjct: 164 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL 204
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 75/161 (46%), Gaps = 11/161 (6%)
Query: 8 GLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
G+E + + E+ + + L+H N++RL+G + LI EY P L + K
Sbjct: 54 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSRFD 110
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL 126
+ + +A L Y H RVIHRD+K N+LL SN KI+DFG +
Sbjct: 111 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFG----WSVHAP 163
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETL 167
S + GT Y+ PE + K D++S GVL E L
Sbjct: 164 SSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL 204
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 23/162 (14%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSL-----DCFLFDPTKTGL 64
EE NE+ L+ L H N+++LF + L+ E+ L + FD
Sbjct: 91 EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA- 149
Query: 65 LGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSN---MNPKISDFGIARLF 121
I++ + G+ YLH ++ ++HRD+K NILL++ +N KI DFG++ F
Sbjct: 150 -------NIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFF 199
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLV 163
D + +GT Y++PE L+ ++ K DV+S GV++
Sbjct: 200 SKD---YKLRDRLGTAYYIAPE-VLKKKYNEKCDVWSCGVIM 237
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 87/172 (50%), Gaps = 15/172 (8%)
Query: 2 SSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTK 61
SS+ G E+ + E+ ++ ++QH N++ L + ILI E + L FL +
Sbjct: 51 SSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNI-LLDSNM-NP--KISDFGI 117
L E L+ + G+ YLH L++ H DLK NI LLD N+ P KI DFG+
Sbjct: 111 ---LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 118 A-RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
A ++ G+E K I GT +++PE +++D++S GV+ LS
Sbjct: 165 AHKIDFGNEF----KNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 77/164 (46%), Gaps = 9/164 (5%)
Query: 7 QGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
+ +++F E+ + L HRNL+RL+G + K ++ E P SL L LLG
Sbjct: 57 EAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLG 115
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF--GGD 124
R + VA+G+ YL R IHRDL A N+LL + KI DFG+ R D
Sbjct: 116 TLSRYAV--QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 170
Query: 125 ELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
R V + + +PE FS SD + FGV + E +
Sbjct: 171 HYVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 85/171 (49%), Gaps = 20/171 (11%)
Query: 7 QGLEEFKNEMMLIAKLQHRNLVRLFGCCIE-HGEKILIYEYMPNKSLDCFLF----DPTK 61
Q +E F E +L+ L H N++ L G + G ++ YM + L F+ +PT
Sbjct: 64 QQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTV 123
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
L+ + ++V A+G+ YL + + +HRDL A N +LD + K++DFG+AR
Sbjct: 124 KDLISFGLQV------ARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDI 174
Query: 122 GGDEL----QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
E Q R+ + + R F+ KSDV+SFGVL+ E L+
Sbjct: 175 LDREYYSVQQHRHARLPVKWTALESLQTYR--FTTKSDVWSFGVLLWELLT 223
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 88/172 (51%), Gaps = 15/172 (8%)
Query: 2 SSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTK 61
SS+ G EE + E+ ++ +++H N++ L + +LI E + L FL +
Sbjct: 45 SSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES 104
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNI-LLDSNM-NPKIS--DFGI 117
L + + L+ + G+ YLH R+ H DLK NI LLD N+ NP+I DFGI
Sbjct: 105 ---LTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 158
Query: 118 A-RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
A ++ G+E K I GT +++PE +++D++S GV+ LS
Sbjct: 159 AHKIEAGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 206
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 77/164 (46%), Gaps = 9/164 (5%)
Query: 7 QGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
+ +++F E+ + L HRNL+RL+G + K ++ E P SL L LLG
Sbjct: 53 EAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLG 111
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF--GGD 124
R + VA+G+ YL R IHRDL A N+LL + KI DFG+ R D
Sbjct: 112 TLSRYAV--QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 166
Query: 125 ELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
R V + + +PE FS SD + FGV + E +
Sbjct: 167 HYVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 88/172 (51%), Gaps = 15/172 (8%)
Query: 2 SSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTK 61
SS+ G EE + E+ ++ +++H N++ L + +LI E + L FL +
Sbjct: 52 SSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES 111
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNI-LLDSNM-NPKIS--DFGI 117
L + + L+ + G+ YLH R+ H DLK NI LLD N+ NP+I DFGI
Sbjct: 112 ---LTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 165
Query: 118 A-RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
A ++ G+E K I GT +++PE +++D++S GV+ LS
Sbjct: 166 AHKIEAGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 86/175 (49%), Gaps = 13/175 (7%)
Query: 7 QGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
+ +E +E ++++ + H ++R++G + + +I +Y+ L L K+
Sbjct: 48 KQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLL---RKSQRFP 104
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL 126
+ V L YLH +I+RDLK NILLD N + KI+DFG A+ +
Sbjct: 105 NPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKY-----V 156
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSL 181
T + GT Y++PE ++ D +SFG+L+ E L+ FY+++++
Sbjct: 157 PDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG--YTPFYDSNTM 209
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 77/164 (46%), Gaps = 9/164 (5%)
Query: 7 QGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
+ +++F E+ + L HRNL+RL+G + K ++ E P SL L LLG
Sbjct: 53 EAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLG 111
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF--GGD 124
R + VA+G+ YL R IHRDL A N+LL + KI DFG+ R D
Sbjct: 112 TLSRYAV--QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 166
Query: 125 ELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
R V + + +PE FS SD + FGV + E +
Sbjct: 167 HXVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 22/185 (11%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHG--EKILIYEYMPNKSLDCFL------FDPTKT 62
+F+ E+ ++ L +V+ G G E L+ EY+P+ L FL D ++
Sbjct: 54 DFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRL 113
Query: 63 GLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG 122
L + + +G+ YL SR R +HRDL A NIL++S + KI+DFG+A+L
Sbjct: 114 LLYSSQ--------ICKGMEYLG--SR-RCVHRDLAARNILVESEAHVKIADFGLAKLLP 162
Query: 123 GDELQSNTKRIVGTYG--YMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDS 180
D+ R G + +PE +FS +SDV+SFGV++ E + + + +
Sbjct: 163 LDK-DXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEF 221
Query: 181 LTLLG 185
L ++G
Sbjct: 222 LRMMG 226
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 86/158 (54%), Gaps = 8/158 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
E+ L+ +L H N+V+L + L++E++ ++ L F+ TG+ ++ +
Sbjct: 53 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL 111
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
+ + QGL + H + RV+HRDLK N+L+++ K++DFG+AR FG +++ +
Sbjct: 112 FQ-LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEV 166
Query: 134 VGTYGYMSPEYALR-GLFSIKSDVFSFGVLVLETLSSK 170
V T Y +PE L +S D++S G + E ++ +
Sbjct: 167 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 86/158 (54%), Gaps = 8/158 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
E+ L+ +L H N+V+L + L++E++ ++ L F+ TG+ ++ +
Sbjct: 52 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL 110
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
+ + QGL + H + RV+HRDLK N+L+++ K++DFG+AR FG +++ +
Sbjct: 111 FQ-LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEV 165
Query: 134 VGTYGYMSPEYALR-GLFSIKSDVFSFGVLVLETLSSK 170
V T Y +PE L +S D++S G + E ++ +
Sbjct: 166 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 86/158 (54%), Gaps = 8/158 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
E+ L+ +L H N+V+L + L++E++ ++ L F+ TG+ ++ +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL 109
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
+ + QGL + H + RV+HRDLK N+L+++ K++DFG+AR FG +++ +
Sbjct: 110 FQ-LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEV 164
Query: 134 VGTYGYMSPEYALR-GLFSIKSDVFSFGVLVLETLSSK 170
V T Y +PE L +S D++S G + E ++ +
Sbjct: 165 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 86/158 (54%), Gaps = 8/158 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
E+ L+ +L H N+V+L + L++E++ ++ L F+ TG+ ++ +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL 109
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
+ + QGL + H + RV+HRDLK N+L+++ K++DFG+AR FG +++ +
Sbjct: 110 FQ-LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEV 164
Query: 134 VGTYGYMSPEYALR-GLFSIKSDVFSFGVLVLETLSSK 170
V T Y +PE L +S D++S G + E ++ +
Sbjct: 165 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 77/164 (46%), Gaps = 9/164 (5%)
Query: 7 QGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
+ +++F E+ + L HRNL+RL+G + K ++ E P SL L LLG
Sbjct: 63 EAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLG 121
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF--GGD 124
R + VA+G+ YL R IHRDL A N+LL + KI DFG+ R D
Sbjct: 122 TLSRYAV--QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 176
Query: 125 ELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
R V + + +PE FS SD + FGV + E +
Sbjct: 177 HXVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 106/268 (39%), Gaps = 49/268 (18%)
Query: 8 GLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
G+E + + E+ + + L+H N++RL+G + LI EY P L + K
Sbjct: 52 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 108
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL 126
+ + +A L Y H RVIHRD+K N+LL S KI++FG +
Sbjct: 109 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFG----WSVHAP 161
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKK--NAHFYNTDSLTLL 184
S + GT Y+ PE + K D++S GVL E L K A+ Y
Sbjct: 162 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ------- 214
Query: 185 GHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVISMLTNE 244
E I + + ++P V E A D +IS L
Sbjct: 215 -------------ETYKRISRVEFTFPDF----------VTEGARD------LISRLLKH 245
Query: 245 NVILPSPLQPAFSHVRIAENSSLPANCE 272
N L+ H I NSS P+NC+
Sbjct: 246 NPSQRPMLREVLEHPWITANSSKPSNCQ 273
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 86/158 (54%), Gaps = 8/158 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
E+ L+ +L H N+V+L + L++E++ ++ L F+ TG+ ++ +
Sbjct: 50 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL 108
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
+ + QGL + H + RV+HRDLK N+L+++ K++DFG+AR FG +++ +
Sbjct: 109 FQ-LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEV 163
Query: 134 VGTYGYMSPEYALR-GLFSIKSDVFSFGVLVLETLSSK 170
V T Y +PE L +S D++S G + E ++ +
Sbjct: 164 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 77/164 (46%), Gaps = 9/164 (5%)
Query: 7 QGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
+ +++F E+ + L HRNL+RL+G + K ++ E P SL L LLG
Sbjct: 53 EAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLG 111
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF--GGD 124
R + VA+G+ YL R IHRDL A N+LL + KI DFG+ R D
Sbjct: 112 TLSRYAV--QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 166
Query: 125 ELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
R V + + +PE FS SD + FGV + E +
Sbjct: 167 HYVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 86/158 (54%), Gaps = 8/158 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
E+ L+ +L H N+V+L + L++E++ ++ L F+ TG+ ++ +
Sbjct: 55 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL 113
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
+ + QGL + H + RV+HRDLK N+L+++ K++DFG+AR FG +++ +
Sbjct: 114 FQ-LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEV 168
Query: 134 VGTYGYMSPEYALR-GLFSIKSDVFSFGVLVLETLSSK 170
V T Y +PE L +S D++S G + E ++ +
Sbjct: 169 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 86/158 (54%), Gaps = 8/158 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
E+ L+ +L H N+V+L + L++E++ ++ L F+ TG+ ++ +
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL 112
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
+ + QGL + H + RV+HRDLK N+L+++ K++DFG+AR FG +++ +
Sbjct: 113 FQ-LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEV 167
Query: 134 VGTYGYMSPEYALR-GLFSIKSDVFSFGVLVLETLSSK 170
V T Y +PE L +S D++S G + E ++ +
Sbjct: 168 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 86/158 (54%), Gaps = 8/158 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
E+ L+ +L H N+V+L + L++E++ ++ L F+ TG+ ++ +
Sbjct: 53 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL 111
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
+ + QGL + H + RV+HRDLK N+L+++ K++DFG+AR FG +++ +
Sbjct: 112 FQ-LLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEV 166
Query: 134 VGTYGYMSPEYALR-GLFSIKSDVFSFGVLVLETLSSK 170
V T Y +PE L +S D++S G + E ++ +
Sbjct: 167 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 86/158 (54%), Gaps = 8/158 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
E+ L+ +L H N+V+L + L++E++ ++ L F+ TG+ ++ +
Sbjct: 52 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL 110
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
+ + QGL + H + RV+HRDLK N+L+++ K++DFG+AR FG +++ +
Sbjct: 111 FQ-LLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEV 165
Query: 134 VGTYGYMSPEYALR-GLFSIKSDVFSFGVLVLETLSSK 170
V T Y +PE L +S D++S G + E ++ +
Sbjct: 166 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 86/158 (54%), Gaps = 8/158 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
E+ L+ +L H N+V+L + L++E++ ++ L F+ TG+ ++ +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL 109
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
+ + QGL + H + RV+HRDLK N+L+++ K++DFG+AR FG +++ +
Sbjct: 110 FQ-LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEV 164
Query: 134 VGTYGYMSPEYALR-GLFSIKSDVFSFGVLVLETLSSK 170
V T Y +PE L +S D++S G + E ++ +
Sbjct: 165 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 86/158 (54%), Gaps = 8/158 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
E+ L+ +L H N+V+L + L++E++ ++ L F+ TG+ ++ +
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL 112
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
+ + QGL + H + RV+HRDLK N+L+++ K++DFG+AR FG +++ +
Sbjct: 113 FQ-LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEV 167
Query: 134 VGTYGYMSPEYALR-GLFSIKSDVFSFGVLVLETLSSK 170
V T Y +PE L +S D++S G + E ++ +
Sbjct: 168 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 86/158 (54%), Gaps = 8/158 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
E+ L+ +L H N+V+L + L++E++ ++ L F+ TG+ ++ +
Sbjct: 53 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL 111
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
+ + QGL + H + RV+HRDLK N+L+++ K++DFG+AR FG +++ +
Sbjct: 112 FQ-LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEV 166
Query: 134 VGTYGYMSPEYALR-GLFSIKSDVFSFGVLVLETLSSK 170
V T Y +PE L +S D++S G + E ++ +
Sbjct: 167 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 88/172 (51%), Gaps = 15/172 (8%)
Query: 2 SSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTK 61
SS+ G EE + E+ ++ +++H N++ L + +LI E + L FL +
Sbjct: 66 SSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES 125
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNI-LLDSNM-NPKIS--DFGI 117
L + + L+ + G+ YLH R+ H DLK NI LLD N+ NP+I DFGI
Sbjct: 126 ---LTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 179
Query: 118 A-RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
A ++ G+E K I GT +++PE +++D++S GV+ LS
Sbjct: 180 AHKIEAGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 227
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 86/158 (54%), Gaps = 8/158 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
E+ L+ +L H N+V+L + L++E++ ++ L F+ TG+ ++ +
Sbjct: 52 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL 110
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
+ + QGL + H + RV+HRDLK N+L+++ K++DFG+AR FG +++ +
Sbjct: 111 FQ-LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEV 165
Query: 134 VGTYGYMSPEYALR-GLFSIKSDVFSFGVLVLETLSSK 170
V T Y +PE L +S D++S G + E ++ +
Sbjct: 166 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 86/158 (54%), Gaps = 8/158 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
E+ L+ +L H N+V+L + L++E++ ++ L F+ TG+ ++ +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL 109
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
+ + QGL + H + RV+HRDLK N+L+++ K++DFG+AR FG +++ +
Sbjct: 110 FQ-LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEV 164
Query: 134 VGTYGYMSPEYALR-GLFSIKSDVFSFGVLVLETLSSK 170
V T Y +PE L +S D++S G + E ++ +
Sbjct: 165 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 77/164 (46%), Gaps = 9/164 (5%)
Query: 7 QGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
+ +++F E+ + L HRNL+RL+G + K ++ E P SL L LLG
Sbjct: 57 EAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLG 115
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF--GGD 124
R + VA+G+ YL R IHRDL A N+LL + KI DFG+ R D
Sbjct: 116 TLSRYAV--QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 170
Query: 125 ELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
R V + + +PE FS SD + FGV + E +
Sbjct: 171 HYVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 86/158 (54%), Gaps = 8/158 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
E+ L+ +L H N+V+L + L++E++ ++ L F+ TG+ ++ +
Sbjct: 50 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL 108
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
+ + QGL + H + RV+HRDLK N+L+++ K++DFG+AR FG +++ +
Sbjct: 109 FQ-LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEV 163
Query: 134 VGTYGYMSPEYALR-GLFSIKSDVFSFGVLVLETLSSK 170
V T Y +PE L +S D++S G + E ++ +
Sbjct: 164 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 77/164 (46%), Gaps = 9/164 (5%)
Query: 7 QGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
+ +++F E+ + L HRNL+RL+G + K ++ E P SL L LLG
Sbjct: 63 EAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLG 121
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF--GGD 124
R + VA+G+ YL R IHRDL A N+LL + KI DFG+ R D
Sbjct: 122 TLSRYAV--QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 176
Query: 125 ELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
R V + + +PE FS SD + FGV + E +
Sbjct: 177 HYVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 86/158 (54%), Gaps = 8/158 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
E+ L+ +L H N+V+L + L++E++ ++ L F+ TG+ ++ +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYL 109
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
+ + QGL + H + RV+HRDLK N+L+++ K++DFG+AR FG +++ +
Sbjct: 110 FQ-LLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEV 164
Query: 134 VGTYGYMSPEYALR-GLFSIKSDVFSFGVLVLETLSSK 170
V T Y +PE L +S D++S G + E ++ +
Sbjct: 165 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 82/157 (52%), Gaps = 9/157 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
NE++++ + ++ N+V + E ++ EY+ SL + T+T + ++
Sbjct: 66 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVC 122
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
E + Q L +LH +VIHRD+K+ NILL + + K++DFG + QS +
Sbjct: 123 RECL-QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSEM 176
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
VGT +M+PE R + K D++S G++ +E + +
Sbjct: 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
+ L YLH +IHRDLK NILL+ +M+ +I+DFG A++ + Q+ VGT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
Y+SPE S SD+++ G ++ + ++
Sbjct: 198 AQYVSPELLTEKSASKSSDLWALGCIIYQLVA 229
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 83/178 (46%), Gaps = 25/178 (14%)
Query: 10 EEFKNEMMLIAKL-QHRNLVRLFGCCIEHGEKILIYEY--------MPNKSLDCFLFDPT 60
E +E+ +++ L H N+V L G C G ++I EY + D F+ T
Sbjct: 94 EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKT 153
Query: 61 KTGLLGWEMRVRILEG-------VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKIS 113
++ + LE VA+G+ +L + IHRDL A NILL KI
Sbjct: 154 SPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKIC 210
Query: 114 DFGIARLFGGDE---LQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
DFG+AR D ++ N + V +M+PE +++ +SDV+S+G+ + E S
Sbjct: 211 DFGLARHIKNDSNYVVKGNARLPV---KWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 90/175 (51%), Gaps = 15/175 (8%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEK-----ILIYEYMPNKSLDCF 55
L + S + +EEF +E + H N++RL G CIE + ++I +M L +
Sbjct: 72 LDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTY 131
Query: 56 -LFDPTKTGL--LGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKI 112
L+ +TG + + ++ + +A G+ YL S +HRDL A N +L +M +
Sbjct: 132 LLYSRLETGPKHIPLQTLLKFMVDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCV 188
Query: 113 SDFGIA-RLFGGDELQSNTKRIVG-TYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
+DFG++ +++ GD + RI +++ E +++ KSDV++FGV + E
Sbjct: 189 ADFGLSKKIYSGDYYRQG--RIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWE 241
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 78/157 (49%), Gaps = 9/157 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
NE++++ H N+V ++ + E ++ E++ +L D + E +
Sbjct: 91 NEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIATV 146
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
V + L YLH+ VIHRD+K+ +ILL S+ K+SDFG + K +
Sbjct: 147 CLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE--VPKRKXL 201
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
VGT +M+PE R + + D++S G++V+E + +
Sbjct: 202 VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGE 238
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 87/172 (50%), Gaps = 15/172 (8%)
Query: 2 SSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTK 61
SS+ G E+ + E+ ++ ++QH N++ L + ILI E + L FL +
Sbjct: 51 SSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNI-LLDSNM-NP--KISDFGI 117
L E L+ + G+ YLH L++ H DLK NI LLD N+ P KI DFG+
Sbjct: 111 ---LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 118 A-RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
A ++ G+E K I GT +++PE +++D++S GV+ LS
Sbjct: 165 AHKIDFGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 86/158 (54%), Gaps = 8/158 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
E+ L+ +L H N+V+L + L++E++ ++ L F+ TG+ ++ +
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYL 112
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
+ + QGL + H + RV+HRDLK N+L+++ K++DFG+AR FG +++ +
Sbjct: 113 FQ-LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEV 167
Query: 134 VGTYGYMSPEYALR-GLFSIKSDVFSFGVLVLETLSSK 170
V T Y +PE L +S D++S G + E ++ +
Sbjct: 168 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 80/173 (46%), Gaps = 11/173 (6%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCF-LFDP 59
+S G E+ K E + L+H ++V L G +++E+M L CF +
Sbjct: 62 FTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADL-CFEIVKR 120
Query: 60 TKTGLLGWE-MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP---KISDF 115
G + E + + + + L Y H + +IHRD+K N+LL S N K+ DF
Sbjct: 121 ADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPENVLLASKENSAPVKLGDF 177
Query: 116 GIARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
G+A G L + + VGT +M+PE R + DV+ GV++ LS
Sbjct: 178 GVAIQLGESGLVAGGR--VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLS 228
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
EE E ++ +L + +VRL G C +L+ E L FL K +
Sbjct: 381 EEMMREAQIMHQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVG--KREEIPVSN 437
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN 129
+L V+ G+ YL + +HR+L A N+LL + KISDFG+++ G D+
Sbjct: 438 VAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADD-SYY 493
Query: 130 TKRIVGTY--GYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
T R G + + +PE FS +SDV+S+GV + E LS
Sbjct: 494 TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 83/178 (46%), Gaps = 25/178 (14%)
Query: 10 EEFKNEMMLIAKL-QHRNLVRLFGCCIEHGEKILIYEY--------MPNKSLDCFLFDPT 60
E +E+ +++ L H N+V L G C G ++I EY + D F+ T
Sbjct: 71 EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKT 130
Query: 61 KTGLLGWEMRVRILEG-------VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKIS 113
++ + LE VA+G+ +L + IHRDL A NILL KI
Sbjct: 131 SPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKIC 187
Query: 114 DFGIARLFGGDE---LQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
DFG+AR D ++ N + V +M+PE +++ +SDV+S+G+ + E S
Sbjct: 188 DFGLARDIKNDSNYVVKGNARLPV---KWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 83/178 (46%), Gaps = 25/178 (14%)
Query: 10 EEFKNEMMLIAKL-QHRNLVRLFGCCIEHGEKILIYEY--------MPNKSLDCFLFDPT 60
E +E+ +++ L H N+V L G C G ++I EY + D F+ T
Sbjct: 87 EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKT 146
Query: 61 KTGLLGWEMRVRILEG-------VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKIS 113
++ + LE VA+G+ +L + IHRDL A NILL KI
Sbjct: 147 SPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKIC 203
Query: 114 DFGIARLFGGDE---LQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
DFG+AR D ++ N + V +M+PE +++ +SDV+S+G+ + E S
Sbjct: 204 DFGLARDIKNDSNYVVKGNARLPV---KWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 83/178 (46%), Gaps = 25/178 (14%)
Query: 10 EEFKNEMMLIAKL-QHRNLVRLFGCCIEHGEKILIYEY--------MPNKSLDCFLFDPT 60
E +E+ +++ L H N+V L G C G ++I EY + D F+ T
Sbjct: 89 EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKT 148
Query: 61 KTGLLGWEMRVRILEG-------VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKIS 113
++ + LE VA+G+ +L + IHRDL A NILL KI
Sbjct: 149 SPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKIC 205
Query: 114 DFGIARLFGGDE---LQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
DFG+AR D ++ N + V +M+PE +++ +SDV+S+G+ + E S
Sbjct: 206 DFGLARDIKNDSNYVVKGNARLPV---KWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 87/172 (50%), Gaps = 15/172 (8%)
Query: 2 SSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTK 61
SS+ G E+ + E+ ++ ++QH N++ L + ILI E + L FL +
Sbjct: 51 SSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNI-LLDSNM-NP--KISDFGI 117
L E L+ + G+ YLH L++ H DLK NI LLD N+ P KI DFG+
Sbjct: 111 ---LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 118 A-RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
A ++ G+E K I GT +++PE +++D++S GV+ LS
Sbjct: 165 AHKIDFGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 87/165 (52%), Gaps = 15/165 (9%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT 60
L+ QG + E+ + L+H ++++L+ E I++ EY N+ D +
Sbjct: 42 LAKSDMQG--RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV---Q 96
Query: 61 KTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARL 120
+ + E R R + + + Y H R +++HRDLK N+LLD ++N KI+DFG++ +
Sbjct: 97 RDKMSEQEAR-RFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNI 152
Query: 121 F-GGDELQSNTKRIVGTYGYMSPEYALRGLFS-IKSDVFSFGVLV 163
G+ L+++ G+ Y +PE L++ + DV+S GV++
Sbjct: 153 MTDGNFLKTSC----GSPNYAAPEVISGKLYAGPEVDVWSCGVIL 193
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 81/165 (49%), Gaps = 16/165 (9%)
Query: 14 NEMMLIAKLQ---HRNLVRLFGCCI-----EHGEKILIYEYMPNKSLDCFLFDPTKTGLL 65
E+ L+ +L+ H N+VRL C + L++E++ ++ L +L GL
Sbjct: 60 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLP 118
Query: 66 GWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDE 125
++ ++ +GL +LH ++HRDLK NIL+ S K++DFG+AR++
Sbjct: 119 AETIK-DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS--- 171
Query: 126 LQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
Q +V T Y +PE L+ ++ D++S G + E K
Sbjct: 172 YQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 81/165 (49%), Gaps = 16/165 (9%)
Query: 14 NEMMLIAKLQ---HRNLVRLFGCCI-----EHGEKILIYEYMPNKSLDCFLFDPTKTGLL 65
E+ L+ +L+ H N+VRL C + L++E++ ++ L +L GL
Sbjct: 52 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLP 110
Query: 66 GWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDE 125
++ ++ +GL +LH ++HRDLK NIL+ S K++DFG+AR++
Sbjct: 111 AETIK-DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS--- 163
Query: 126 LQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
Q +V T Y +PE L+ ++ D++S G + E K
Sbjct: 164 YQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 82/157 (52%), Gaps = 9/157 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
NE++++ + ++ N+V + E ++ EY+ SL + T+T + ++
Sbjct: 66 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVC 122
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
E + Q L +LH +VIHRD+K+ NILL + + K++DFG + QS +
Sbjct: 123 RECL-QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSXM 176
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
VGT +M+PE R + K D++S G++ +E + +
Sbjct: 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 75/164 (45%), Gaps = 11/164 (6%)
Query: 8 GLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
G+E + + E+ + + L+H N++RL+G + LI EY P L + K
Sbjct: 51 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 107
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL 126
+ + +A L Y H RVIHRD+K N+LL S KI+DFG +
Sbjct: 108 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSCHAP 160
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
S + GT Y+ PE + K D++S GVL E L K
Sbjct: 161 SSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 81/165 (49%), Gaps = 16/165 (9%)
Query: 14 NEMMLIAKLQ---HRNLVRLFGCCI-----EHGEKILIYEYMPNKSLDCFLFDPTKTGLL 65
E+ L+ +L+ H N+VRL C + L++E++ ++ L +L GL
Sbjct: 52 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLP 110
Query: 66 GWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDE 125
++ ++ +GL +LH ++HRDLK NIL+ S K++DFG+AR++
Sbjct: 111 AETIK-DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS--- 163
Query: 126 LQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
Q +V T Y +PE L+ ++ D++S G + E K
Sbjct: 164 YQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 75/164 (45%), Gaps = 11/164 (6%)
Query: 8 GLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
G+E + + E+ + + L+H N++RL+G + LI EY P L + K
Sbjct: 50 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 106
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL 126
+ + +A L Y H RVIHRD+K N+LL S KI+DFG +
Sbjct: 107 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAP 159
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
S + GT Y+ PE + K D++S GVL E L K
Sbjct: 160 SSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 83/178 (46%), Gaps = 25/178 (14%)
Query: 10 EEFKNEMMLIAKL-QHRNLVRLFGCCIEHGEKILIYEY--------MPNKSLDCFLFDPT 60
E +E+ +++ L H N+V L G C G ++I EY + D F+ T
Sbjct: 94 EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKT 153
Query: 61 KTGLLGWEMRVRILEG-------VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKIS 113
++ + LE VA+G+ +L + IHRDL A NILL KI
Sbjct: 154 SPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKIC 210
Query: 114 DFGIARLFGGDE---LQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
DFG+AR D ++ N + V +M+PE +++ +SDV+S+G+ + E S
Sbjct: 211 DFGLARDIKNDSNYVVKGNARLPV---KWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 82/157 (52%), Gaps = 9/157 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
NE++++ + ++ N+V + E ++ EY+ SL + T+T + ++
Sbjct: 66 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVC 122
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
E + Q L +LH +VIHRD+K+ NILL + + K++DFG + QS +
Sbjct: 123 RECL-QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSTM 176
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
VGT +M+PE R + K D++S G++ +E + +
Sbjct: 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 87/172 (50%), Gaps = 15/172 (8%)
Query: 2 SSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTK 61
SS+ G E+ + E+ ++ ++QH N++ L + ILI E + L FL +
Sbjct: 51 SSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNI-LLDSNM-NP--KISDFGI 117
L E L+ + G+ YLH L++ H DLK NI LLD N+ P KI DFG+
Sbjct: 111 ---LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 118 A-RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
A ++ G+E K I GT +++PE +++D++S GV+ LS
Sbjct: 165 AHKIDFGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 87/165 (52%), Gaps = 15/165 (9%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT 60
L+ QG + E+ + L+H ++++L+ E I++ EY N+ D +
Sbjct: 46 LAKSDMQG--RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV---Q 100
Query: 61 KTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARL 120
+ + E R R + + + Y H R +++HRDLK N+LLD ++N KI+DFG++ +
Sbjct: 101 RDKMSEQEAR-RFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNI 156
Query: 121 F-GGDELQSNTKRIVGTYGYMSPEYALRGLFS-IKSDVFSFGVLV 163
G+ L+++ G+ Y +PE L++ + DV+S GV++
Sbjct: 157 MTDGNFLKTSC----GSPNYAAPEVISGKLYAGPEVDVWSCGVIL 197
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 87/172 (50%), Gaps = 15/172 (8%)
Query: 2 SSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTK 61
SS+ G E+ + E+ ++ ++QH N++ L + ILI E + L FL +
Sbjct: 51 SSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNI-LLDSNM-NP--KISDFGI 117
L E L+ + G+ YLH L++ H DLK NI LLD N+ P KI DFG+
Sbjct: 111 ---LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 118 A-RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
A ++ G+E K I GT +++PE +++D++S GV+ LS
Sbjct: 165 AHKIDFGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 87/172 (50%), Gaps = 15/172 (8%)
Query: 2 SSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTK 61
SS+ G E+ + E+ ++ ++QH N++ L + ILI E + L FL +
Sbjct: 50 SSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 109
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNI-LLDSNM-NP--KISDFGI 117
L E L+ + G+ YLH L++ H DLK NI LLD N+ P KI DFG+
Sbjct: 110 ---LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 163
Query: 118 A-RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
A ++ G+E K I GT +++PE +++D++S GV+ LS
Sbjct: 164 AHKIDFGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 211
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 87/172 (50%), Gaps = 15/172 (8%)
Query: 2 SSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTK 61
SS+ G E+ + E+ ++ ++QH N++ L + ILI E + L FL +
Sbjct: 50 SSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 109
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNI-LLDSNM-NP--KISDFGI 117
L E L+ + G+ YLH L++ H DLK NI LLD N+ P KI DFG+
Sbjct: 110 ---LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 163
Query: 118 A-RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
A ++ G+E K I GT +++PE +++D++S GV+ LS
Sbjct: 164 AHKIDFGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 211
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKIL--IYEYMPNKSLDCFLFDPTKTGLLGWE 68
+F+ E+ ++ L +V+ G G + L + EY+P+ L FL L
Sbjct: 58 DFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDAS 115
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
+ + +G+ YL R +HRDL A NIL++S + KI+DFG+A+L D+
Sbjct: 116 RLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK--- 169
Query: 129 NTKRIVGTYG-----YMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTL 183
+V G + +PE +FS +SDV+SFGV++ E + + + + L +
Sbjct: 170 -DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRM 228
Query: 184 LG 185
+G
Sbjct: 229 MG 230
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 75/164 (45%), Gaps = 11/164 (6%)
Query: 8 GLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
G+E + + E+ + + L+H N++RL+G + LI EY P L + K
Sbjct: 49 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 105
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL 126
+ + +A L Y H RVIHRD+K N+LL S KI+DFG +
Sbjct: 106 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAP 158
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
S + GT Y+ PE + K D++S GVL E L K
Sbjct: 159 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKIL--IYEYMPNKSLDCFLFDPTKTGLLGWE 68
+F+ E+ ++ L +V+ G G + L + EY+P+ L FL L
Sbjct: 70 DFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDAS 127
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
+ + +G+ YL R +HRDL A NIL++S + KI+DFG+A+L D+
Sbjct: 128 RLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK--- 181
Query: 129 NTKRIVGTYG-----YMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTL 183
+V G + +PE +FS +SDV+SFGV++ E + + + + L +
Sbjct: 182 -DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRM 240
Query: 184 LG 185
+G
Sbjct: 241 MG 242
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKIL--IYEYMPNKSLDCFLFDPTKTGLLGWE 68
+F+ E+ ++ L +V+ G G + L + EY+P+ L FL L
Sbjct: 57 DFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDAS 114
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
+ + +G+ YL R +HRDL A NIL++S + KI+DFG+A+L D+
Sbjct: 115 RLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK--- 168
Query: 129 NTKRIVGTYG-----YMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTL 183
+V G + +PE +FS +SDV+SFGV++ E + + + + L +
Sbjct: 169 -DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRM 227
Query: 184 LG 185
+G
Sbjct: 228 MG 229
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 87/172 (50%), Gaps = 15/172 (8%)
Query: 2 SSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTK 61
SS+ G E+ + E+ ++ ++QH N++ L + ILI E + L FL +
Sbjct: 51 SSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNI-LLDSNM-NP--KISDFGI 117
L E L+ + G+ YLH L++ H DLK NI LLD N+ P KI DFG+
Sbjct: 111 ---LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 118 A-RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
A ++ G+E K I GT +++PE +++D++S GV+ LS
Sbjct: 165 AHKIDFGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 89/182 (48%), Gaps = 11/182 (6%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT 60
+ ++S + LE++ E+ ++A H N+V+L ++ E+ ++D + +
Sbjct: 43 IDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE-L 101
Query: 61 KTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARL 120
+ L +++V + + L YLH ++IHRDLKA NIL + + K++DFG++
Sbjct: 102 ERPLTESQIQV-VCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAK 157
Query: 121 FGGDELQSNTKRIVGTYGYMSPEYAL-----RGLFSIKSDVFSFGVLVLETLSSKKNAHF 175
+Q +GT +M+PE + + K+DV+S G+ ++E + H
Sbjct: 158 NTRTXIQRRDS-FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHE 216
Query: 176 YN 177
N
Sbjct: 217 LN 218
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 87/165 (52%), Gaps = 15/165 (9%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT 60
L+ QG + E+ + L+H ++++L+ E I++ EY N+ D +
Sbjct: 52 LAKSDMQG--RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV---Q 106
Query: 61 KTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARL 120
+ + E R R + + + Y H R +++HRDLK N+LLD ++N KI+DFG++ +
Sbjct: 107 RDKMSEQEAR-RFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNI 162
Query: 121 F-GGDELQSNTKRIVGTYGYMSPEYALRGLFS-IKSDVFSFGVLV 163
G+ L+++ G+ Y +PE L++ + DV+S GV++
Sbjct: 163 MTDGNFLKTSC----GSPNYAAPEVISGKLYAGPEVDVWSCGVIL 203
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 87/165 (52%), Gaps = 15/165 (9%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT 60
L+ QG + E+ + L+H ++++L+ E I++ EY N+ D +
Sbjct: 51 LAKSDMQG--RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV---Q 105
Query: 61 KTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARL 120
+ + E R R + + + Y H R +++HRDLK N+LLD ++N KI+DFG++ +
Sbjct: 106 RDKMSEQEAR-RFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNI 161
Query: 121 F-GGDELQSNTKRIVGTYGYMSPEYALRGLFS-IKSDVFSFGVLV 163
G+ L+++ G+ Y +PE L++ + DV+S GV++
Sbjct: 162 MTDGNFLKTSC----GSPNYAAPEVISGKLYAGPEVDVWSCGVIL 202
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 82/157 (52%), Gaps = 9/157 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
NE++++ + ++ N+V + E ++ EY+ SL + T+T + ++
Sbjct: 67 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVC 123
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
E + Q L +LH +VIHRD+K+ NILL + + K++DFG + QS +
Sbjct: 124 RECL-QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSXM 177
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
VGT +M+PE R + K D++S G++ +E + +
Sbjct: 178 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 75/164 (45%), Gaps = 11/164 (6%)
Query: 8 GLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
G+E + + E+ + + L+H N++RL+G + LI EY P L + K
Sbjct: 50 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 106
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL 126
+ + +A L Y H RVIHRD+K N+LL S KI+DFG +
Sbjct: 107 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAP 159
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
S + GT Y+ PE + K D++S GVL E L K
Sbjct: 160 SSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 87/172 (50%), Gaps = 15/172 (8%)
Query: 2 SSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTK 61
SS+ G E+ + E+ ++ ++QH N++ L + ILI E + L FL +
Sbjct: 51 SSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNI-LLDSNM-NP--KISDFGI 117
L E L+ + G+ YLH L++ H DLK NI LLD N+ P KI DFG+
Sbjct: 111 ---LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 118 A-RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
A ++ G+E K I GT +++PE +++D++S GV+ LS
Sbjct: 165 AHKIDFGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 87/172 (50%), Gaps = 15/172 (8%)
Query: 2 SSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTK 61
SS+ G E+ + E+ ++ ++QH N++ L + ILI E + L FL +
Sbjct: 51 SSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNI-LLDSNM-NP--KISDFGI 117
L E L+ + G+ YLH L++ H DLK NI LLD N+ P KI DFG+
Sbjct: 111 ---LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 118 A-RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
A ++ G+E K I GT +++PE +++D++S GV+ LS
Sbjct: 165 AHKIDFGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 75/164 (45%), Gaps = 11/164 (6%)
Query: 8 GLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
G+E + + E+ + + L+H N++RL+G + LI EY P L + K
Sbjct: 53 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 109
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL 126
+ + +A L Y H RVIHRD+K N+LL S KI+DFG +
Sbjct: 110 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAP 162
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
S + GT Y+ PE + K D++S GVL E L K
Sbjct: 163 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 87/172 (50%), Gaps = 15/172 (8%)
Query: 2 SSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTK 61
SS+ G E+ + E+ ++ ++QH N++ L + ILI E + L FL +
Sbjct: 51 SSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNI-LLDSNM-NP--KISDFGI 117
L E L+ + G+ YLH L++ H DLK NI LLD N+ P KI DFG+
Sbjct: 111 ---LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 118 A-RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
A ++ G+E K I GT +++PE +++D++S GV+ LS
Sbjct: 165 AHKIDFGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 75/164 (45%), Gaps = 11/164 (6%)
Query: 8 GLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
G+E + + E+ + + L+H N++RL+G + LI EY P L + K
Sbjct: 47 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 103
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL 126
+ + +A L Y H RVIHRD+K N+LL S KI+DFG +
Sbjct: 104 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAP 156
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
S + GT Y+ PE + K D++S GVL E L K
Sbjct: 157 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 87/172 (50%), Gaps = 15/172 (8%)
Query: 2 SSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTK 61
SS+ G E+ + E+ ++ ++QH N++ L + ILI E + L FL +
Sbjct: 51 SSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNI-LLDSNM-NP--KISDFGI 117
L E L+ + G+ YLH L++ H DLK NI LLD N+ P KI DFG+
Sbjct: 111 ---LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 118 A-RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
A ++ G+E K I GT +++PE +++D++S GV+ LS
Sbjct: 165 AHKIDFGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 75/164 (45%), Gaps = 11/164 (6%)
Query: 8 GLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
G+E + + E+ + + L+H N++RL+G + LI EY P L + K
Sbjct: 53 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 109
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL 126
+ + +A L Y H RVIHRD+K N+LL S KI+DFG +
Sbjct: 110 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAP 162
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
S + GT Y+ PE + K D++S GVL E L K
Sbjct: 163 SSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 75/164 (45%), Gaps = 11/164 (6%)
Query: 8 GLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
G+E + + E+ + + L+H N++RL+G + LI EY P L + K
Sbjct: 54 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 110
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL 126
+ + +A L Y H RVIHRD+K N+LL S KI+DFG +
Sbjct: 111 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAP 163
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
S + GT Y+ PE + K D++S GVL E L K
Sbjct: 164 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 75/164 (45%), Gaps = 11/164 (6%)
Query: 8 GLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
G+E + + E+ + + L+H N++RL+G + LI EY P L + K
Sbjct: 53 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 109
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL 126
+ + +A L Y H RVIHRD+K N+LL S KI+DFG +
Sbjct: 110 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAP 162
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
S + GT Y+ PE + K D++S GVL E L K
Sbjct: 163 SSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 75/164 (45%), Gaps = 11/164 (6%)
Query: 8 GLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
G+E + + E+ + + L+H N++RL+G + LI EY P L + K
Sbjct: 50 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 106
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL 126
+ + +A L Y H RVIHRD+K N+LL S KI+DFG +
Sbjct: 107 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAP 159
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
S + GT Y+ PE + K D++S GVL E L K
Sbjct: 160 SSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 85/158 (53%), Gaps = 8/158 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
E+ L+ +L H N+V+L + L++E++ + L F+ TG+ ++ +
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYL 112
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
+ + QGL + H + RV+HRDLK N+L+++ K++DFG+AR FG +++ +
Sbjct: 113 FQ-LLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEV 167
Query: 134 VGTYGYMSPEYALR-GLFSIKSDVFSFGVLVLETLSSK 170
V T Y +PE L +S D++S G + E ++ +
Sbjct: 168 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 87/172 (50%), Gaps = 15/172 (8%)
Query: 2 SSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTK 61
SS+ G E+ + E+ ++ ++QH N++ L + ILI E + L FL +
Sbjct: 51 SSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNI-LLDSNM-NP--KISDFGI 117
L E L+ + G+ YLH L++ H DLK NI LLD N+ P KI DFG+
Sbjct: 111 ---LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 118 A-RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
A ++ G+E K I GT +++PE +++D++S GV+ LS
Sbjct: 165 AHKIDFGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 85/158 (53%), Gaps = 8/158 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
E+ L+ +L H N+V+L + L++E++ + L F+ TG+ ++ +
Sbjct: 52 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYL 110
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
+ + QGL + H + RV+HRDLK N+L+++ K++DFG+AR FG +++ +
Sbjct: 111 FQ-LLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEV 165
Query: 134 VGTYGYMSPEYALR-GLFSIKSDVFSFGVLVLETLSSK 170
V T Y +PE L +S D++S G + E ++ +
Sbjct: 166 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 75/161 (46%), Gaps = 23/161 (14%)
Query: 85 HHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTK-RIVGTYGYMSPE 143
H L++IHRD+K SNILLD + N K+ DFGI+ G + S K R G YM+PE
Sbjct: 140 HLKENLKIIHRDIKPSNILLDRSGNIKLCDFGIS----GQLVDSIAKTRDAGCRPYMAPE 195
Query: 144 Y----ALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNT--DSLTLLGHAWNLWNDGRAW 197
A R + ++SDV+S G+ + E + + +N+ D LT +
Sbjct: 196 RIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKG---------- 245
Query: 198 ELMDSILQNDASYPMLNRYINVALLCVQENAADRPTMLEVI 238
L N +IN LC+ ++ + RP E++
Sbjct: 246 --DPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELL 284
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 85/158 (53%), Gaps = 8/158 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
E+ L+ +L H N+V+L + L++E++ + L F+ TG+ ++ +
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYL 112
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
+ + QGL + H + RV+HRDLK N+L+++ K++DFG+AR FG +++ +
Sbjct: 113 FQ-LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEV 167
Query: 134 VGTYGYMSPEYALR-GLFSIKSDVFSFGVLVLETLSSK 170
V T Y +PE L +S D++S G + E ++ +
Sbjct: 168 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 83/178 (46%), Gaps = 11/178 (6%)
Query: 7 QGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
Q E NE++++ QH N+V ++ + E ++ E++ +L D +
Sbjct: 59 QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT----DIVTHTRMN 114
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL 126
E + V Q L LH VIHRD+K+ +ILL + K+SDFG +
Sbjct: 115 EEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-- 169
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLL 184
K +VGT +M+PE R + + D++S G++V+E + + ++N L +
Sbjct: 170 VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP--YFNEPPLKAM 225
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 85/158 (53%), Gaps = 8/158 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
E+ L+ +L H N+V+L + L++E++ + L F+ TG+ ++ +
Sbjct: 53 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYL 111
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
+ + QGL + H + RV+HRDLK N+L+++ K++DFG+AR FG +++ +
Sbjct: 112 FQ-LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEV 166
Query: 134 VGTYGYMSPEYALR-GLFSIKSDVFSFGVLVLETLSSK 170
V T Y +PE L +S D++S G + E ++ +
Sbjct: 167 V-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 11/171 (6%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
NE++++ QH N+V ++ + E ++ E++ +L D + E +
Sbjct: 75 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAV 130
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
V Q L LH VIHRD+K+ +ILL + K+SDFG + K +
Sbjct: 131 CLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXL 185
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLL 184
VGT +M+PE R + + D++S G++V+E + + ++N L +
Sbjct: 186 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP--YFNEPPLKAM 234
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 87/172 (50%), Gaps = 15/172 (8%)
Query: 2 SSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTK 61
SS+ G E+ + E+ ++ ++QH N++ L + ILI E + L FL +
Sbjct: 51 SSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES 110
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNI-LLDSNM-NP--KISDFGI 117
L E L+ + G+ YLH L++ H DLK NI LLD N+ P KI DFG+
Sbjct: 111 ---LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 118 A-RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
A ++ G+E K I GT +++PE +++D++S GV+ LS
Sbjct: 165 AHKIDFGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF--GGDELQSNTKRIV 134
VA+G+ +L S + IHRDL A NILL N KI DFG+AR D ++ R+
Sbjct: 208 VARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL- 263
Query: 135 GTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+M+PE ++S KSDV+S+GVL+ E S
Sbjct: 264 -PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 11/171 (6%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
NE++++ QH N+V ++ + E ++ E++ +L D + E +
Sbjct: 77 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAV 132
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
V Q L LH VIHRD+K+ +ILL + K+SDFG + K +
Sbjct: 133 CLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXL 187
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLL 184
VGT +M+PE R + + D++S G++V+E + + ++N L +
Sbjct: 188 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP--YFNEPPLKAM 236
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 83/178 (46%), Gaps = 11/178 (6%)
Query: 7 QGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
Q E NE++++ QH N+V ++ + E ++ E++ +L D +
Sbjct: 63 QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT----DIVTHTRMN 118
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL 126
E + V Q L LH VIHRD+K+ +ILL + K+SDFG +
Sbjct: 119 EEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-- 173
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLL 184
K +VGT +M+PE R + + D++S G++V+E + + ++N L +
Sbjct: 174 VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP--YFNEPPLKAM 229
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 89/187 (47%), Gaps = 23/187 (12%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEK------ILIYEYMPNKSLDCFLFDPTKT 62
+EEF E + + H ++ +L G + K ++I +M + L FL ++
Sbjct: 69 IEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLL-ASRI 127
Query: 63 GL----LGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
G L + VR + +A G+ YL S IHRDL A N +L +M ++DFG++
Sbjct: 128 GENPFNLPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLS 184
Query: 119 R-LFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKK------ 171
R ++ GD + + +++ E L+++ SDV++FGV + E ++ +
Sbjct: 185 RKIYSGDYYRQGCASKLPV-KWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGI 243
Query: 172 -NAHFYN 177
NA YN
Sbjct: 244 ENAEIYN 250
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 15/132 (11%)
Query: 56 LFDPTKTGLLGWEMRVRILEGVAQGLLYLHH--------YSRLRVIHRDLKASNILLDSN 107
L D K ++ W + E +++GL YLH + + HRD K+ N+LL S+
Sbjct: 100 LTDYLKGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSD 159
Query: 108 MNPKISDFGIARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVF------SFGV 161
+ ++DFG+A F + +T VGT YM+PE L G + + D F + G+
Sbjct: 160 LTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE-VLEGAINFQRDAFLRIDMYAMGL 218
Query: 162 LVLETLSSKKNA 173
++ E +S K A
Sbjct: 219 VLWELVSRCKAA 230
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 83/171 (48%), Gaps = 11/171 (6%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
NE++++ QH N+V ++ + E ++ E++ +L + T T + E +
Sbjct: 197 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV---THT-RMNEEQIAAV 252
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
V Q L LH VIHRD+K+ +ILL + K+SDFG + K +
Sbjct: 253 CLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXL 307
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLL 184
VGT +M+PE R + + D++S G++V+E + + ++N L +
Sbjct: 308 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE--PPYFNEPPLKAM 356
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 81/165 (49%), Gaps = 16/165 (9%)
Query: 14 NEMMLIAKLQ---HRNLVRLFGCCI-----EHGEKILIYEYMPNKSLDCFLFDPTKTGLL 65
E+ L+ +L+ H N+VRL C + L++E++ ++ L +L GL
Sbjct: 52 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLP 110
Query: 66 GWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDE 125
++ ++ +GL +LH ++HRDLK NIL+ S K++DFG+AR++
Sbjct: 111 AETIK-DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS--- 163
Query: 126 LQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
Q +V T Y +PE L+ ++ D++S G + E K
Sbjct: 164 YQMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 75/164 (45%), Gaps = 11/164 (6%)
Query: 8 GLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
G+E + + E+ + + L+H N++RL+G + LI EY P L + K
Sbjct: 50 GVEHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAP---LGTVYRELQKLSKFD 106
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL 126
+ + +A L Y H +VIHRD+K N+LL S KI+DFG +
Sbjct: 107 EQRTATYITELANALSYCHSK---KVIHRDIKPENLLLGSAGELKIADFG----WSVHAP 159
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
S + GT Y+ PE + K D++S GVL E L K
Sbjct: 160 SSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 18/161 (11%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILI-YEYMPNKSLDCFL-----FDPTKTGLLGW 67
E ++++L H V+L+ + EK+ Y N L ++ FD T T
Sbjct: 79 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 137
Query: 68 EMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQ 127
E + L YLH +IHRDLK NILL+ +M+ +I+DFG A++ + Q
Sbjct: 138 E--------IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 186
Query: 128 SNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+ VGT Y+SPE SD+++ G ++ + ++
Sbjct: 187 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 227
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 91/188 (48%), Gaps = 24/188 (12%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT 60
+ ++S + LE++ E+ ++A H N+V+L ++ E+ ++D + +
Sbjct: 70 IDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE 129
Query: 61 KTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARL 120
+ L +++V + + L YLH ++IHRDLKA NIL + + K++DFG++
Sbjct: 130 RP-LTESQIQV-VCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS-- 182
Query: 121 FGGDELQSNTKRI------VGTYGYMSPEYAL-----RGLFSIKSDVFSFGVLVLETLSS 169
NT+ I +GT +M+PE + + K+DV+S G+ ++E
Sbjct: 183 ------AKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEI 236
Query: 170 KKNAHFYN 177
+ H N
Sbjct: 237 EPPHHELN 244
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 91/188 (48%), Gaps = 24/188 (12%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT 60
+ ++S + LE++ E+ ++A H N+V+L ++ E+ ++D + +
Sbjct: 70 IDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE 129
Query: 61 KTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARL 120
+ L +++V + + L YLH ++IHRDLKA NIL + + K++DFG++
Sbjct: 130 RP-LTESQIQV-VCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS-- 182
Query: 121 FGGDELQSNTKRI------VGTYGYMSPEYAL-----RGLFSIKSDVFSFGVLVLETLSS 169
NT+ I +GT +M+PE + + K+DV+S G+ ++E
Sbjct: 183 ------AKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEI 236
Query: 170 KKNAHFYN 177
+ H N
Sbjct: 237 EPPHHELN 244
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 91/188 (48%), Gaps = 24/188 (12%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT 60
+ ++S + LE++ E+ ++A H N+V+L ++ E+ ++D + +
Sbjct: 70 IDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE 129
Query: 61 KTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARL 120
+ L +++V + + L YLH ++IHRDLKA NIL + + K++DFG++
Sbjct: 130 RP-LTESQIQV-VCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS-- 182
Query: 121 FGGDELQSNTKRI------VGTYGYMSPEYAL-----RGLFSIKSDVFSFGVLVLETLSS 169
NT+ I +GT +M+PE + + K+DV+S G+ ++E
Sbjct: 183 ------AKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEI 236
Query: 170 KKNAHFYN 177
+ H N
Sbjct: 237 EPPHHELN 244
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 18/162 (11%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILI-YEYMPNKSLDCFL-----FDPTKTGLLGW 67
E ++++L H V+L+ + EK+ Y N L ++ FD T T
Sbjct: 81 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 139
Query: 68 EMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQ 127
E + L YLH +IHRDLK NILL+ +M+ +I+DFG A++ + Q
Sbjct: 140 E--------IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188
Query: 128 SNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSS 169
+ VGT Y+SPE SD+++ G ++ + ++
Sbjct: 189 ARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 18/161 (11%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILI-YEYMPNKSLDCFL-----FDPTKTGLLGW 67
E ++++L H V+L+ + EK+ Y N L ++ FD T T
Sbjct: 79 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 137
Query: 68 EMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQ 127
E + L YLH +IHRDLK NILL+ +M+ +I+DFG A++ + Q
Sbjct: 138 E--------IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 186
Query: 128 SNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+ VGT Y+SPE SD+++ G ++ + ++
Sbjct: 187 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 227
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 18/161 (11%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILI-YEYMPNKSLDCFL-----FDPTKTGLLGW 67
E ++++L H V+L+ + EK+ Y N L ++ FD T T
Sbjct: 82 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 140
Query: 68 EMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQ 127
E + L YLH +IHRDLK NILL+ +M+ +I+DFG A++ + Q
Sbjct: 141 E--------IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 189
Query: 128 SNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+ VGT Y+SPE SD+++ G ++ + ++
Sbjct: 190 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 230
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 11/171 (6%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
NE++++ QH N+V ++ + E ++ E++ +L D + E +
Sbjct: 120 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAV 175
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
V Q L LH VIHRD+K+ +ILL + K+SDFG + K +
Sbjct: 176 CLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXL 230
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLL 184
VGT +M+PE R + + D++S G++V+E + + ++N L +
Sbjct: 231 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE--PPYFNEPPLKAM 279
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 18/161 (11%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILI-YEYMPNKSLDCFL-----FDPTKTGLLGW 67
E ++++L H V+L+ + EK+ Y N L ++ FD T T
Sbjct: 79 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 137
Query: 68 EMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQ 127
E + L YLH +IHRDLK NILL+ +M+ +I+DFG A++ + Q
Sbjct: 138 E--------IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 186
Query: 128 SNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+ VGT Y+SPE SD+++ G ++ + ++
Sbjct: 187 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 227
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 18/161 (11%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILI-YEYMPNKSLDCFL-----FDPTKTGLLGW 67
E ++++L H V+L+ + EK+ Y N L ++ FD T T
Sbjct: 82 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 140
Query: 68 EMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQ 127
E + L YLH +IHRDLK NILL+ +M+ +I+DFG A++ + Q
Sbjct: 141 E--------IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 189
Query: 128 SNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+ VGT Y+SPE SD+++ G ++ + ++
Sbjct: 190 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 230
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 18/161 (11%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILI-YEYMPNKSLDCFL-----FDPTKTGLLGW 67
E ++++L H V+L+ + EK+ Y N L ++ FD T T
Sbjct: 81 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 139
Query: 68 EMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQ 127
E + L YLH +IHRDLK NILL+ +M+ +I+DFG A++ + Q
Sbjct: 140 E--------IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188
Query: 128 SNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+ VGT Y+SPE SD+++ G ++ + ++
Sbjct: 189 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 229
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 18/161 (11%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILI-YEYMPNKSLDCFL-----FDPTKTGLLGW 67
E ++++L H V+L+ + EK+ Y N L ++ FD T T
Sbjct: 84 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 142
Query: 68 EMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQ 127
E + L YLH +IHRDLK NILL+ +M+ +I+DFG A++ + Q
Sbjct: 143 E--------IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 191
Query: 128 SNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+ VGT Y+SPE SD+++ G ++ + ++
Sbjct: 192 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 232
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 18/161 (11%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILI-YEYMPNKSLDCFL-----FDPTKTGLLGW 67
E ++++L H V+L+ + EK+ Y N L ++ FD T T
Sbjct: 79 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 137
Query: 68 EMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQ 127
E + L YLH +IHRDLK NILL+ +M+ +I+DFG A++ + Q
Sbjct: 138 E--------IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 186
Query: 128 SNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+ VGT Y+SPE SD+++ G ++ + ++
Sbjct: 187 ARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 227
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 18/161 (11%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILI-YEYMPNKSLDCFL-----FDPTKTGLLGW 67
E ++++L H V+L+ + EK+ Y N L ++ FD T T
Sbjct: 59 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 117
Query: 68 EMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQ 127
E + L YLH +IHRDLK NILL+ +M+ +I+DFG A++ + Q
Sbjct: 118 E--------IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 166
Query: 128 SNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+ VGT Y+SPE SD+++ G ++ + ++
Sbjct: 167 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 207
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 18/162 (11%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILI-YEYMPNKSLDCFL-----FDPTKTGLLGW 67
E ++++L H V+L+ + EK+ Y N L ++ FD T T
Sbjct: 81 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 139
Query: 68 EMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQ 127
E + L YLH +IHRDLK NILL+ +M+ +I+DFG A++ + Q
Sbjct: 140 E--------IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188
Query: 128 SNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSS 169
+ VGT Y+SPE SD+++ G ++ + ++
Sbjct: 189 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 18/161 (11%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILI-YEYMPNKSLDCFL-----FDPTKTGLLGW 67
E ++++L H V+L+ + EK+ Y N L ++ FD T T
Sbjct: 81 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 139
Query: 68 EMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQ 127
E + L YLH +IHRDLK NILL+ +M+ +I+DFG A++ + Q
Sbjct: 140 E--------IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188
Query: 128 SNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+ VGT Y+SPE SD+++ G ++ + ++
Sbjct: 189 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 229
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 18/161 (11%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILI-YEYMPNKSLDCFL-----FDPTKTGLLGW 67
E ++++L H V+L+ + EK+ Y N L ++ FD T T
Sbjct: 56 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 114
Query: 68 EMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQ 127
E + L YLH +IHRDLK NILL+ +M+ +I+DFG A++ + Q
Sbjct: 115 E--------IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 163
Query: 128 SNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+ VGT Y+SPE SD+++ G ++ + ++
Sbjct: 164 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 204
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 18/161 (11%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILI-YEYMPNKSLDCFL-----FDPTKTGLLGW 67
E ++++L H V+L+ + EK+ Y N L ++ FD T T
Sbjct: 81 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 139
Query: 68 EMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQ 127
E + L YLH +IHRDLK NILL+ +M+ +I+DFG A++ + Q
Sbjct: 140 E--------IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188
Query: 128 SNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+ VGT Y+SPE SD+++ G ++ + ++
Sbjct: 189 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 229
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 18/161 (11%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILI-YEYMPNKSLDCFL-----FDPTKTGLLGW 67
E ++++L H V+L+ + EK+ Y N L ++ FD T T
Sbjct: 58 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 116
Query: 68 EMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQ 127
E + L YLH +IHRDLK NILL+ +M+ +I+DFG A++ + Q
Sbjct: 117 E--------IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 165
Query: 128 SNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+ VGT Y+SPE SD+++ G ++ + ++
Sbjct: 166 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 206
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 18/161 (11%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILI-YEYMPNKSLDCFL-----FDPTKTGLLGW 67
E ++++L H V+L+ + EK+ Y N L ++ FD T T
Sbjct: 63 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 121
Query: 68 EMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQ 127
E + L YLH +IHRDLK NILL+ +M+ +I+DFG A++ + Q
Sbjct: 122 E--------IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 170
Query: 128 SNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+ VGT Y+SPE SD+++ G ++ + ++
Sbjct: 171 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 211
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 10/95 (10%)
Query: 73 ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP---KISDFGIARLFGGDELQSN 129
I++ V G+ YLH ++ ++HRDLK N+LL+S KI DFG++ +F E Q
Sbjct: 141 IIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVF---ENQKK 194
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVL 164
K +GT Y++PE LR + K DV+S GV++
Sbjct: 195 MKERLGTAYYIAPE-VLRKKYDEKCDVWSIGVILF 228
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 18/161 (11%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILI-YEYMPNKSLDCFL-----FDPTKTGLLGW 67
E ++++L H V+L+ + EK+ Y N L ++ FD T T
Sbjct: 78 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 136
Query: 68 EMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQ 127
E + L YLH +IHRDLK NILL+ +M+ +I+DFG A++ + Q
Sbjct: 137 E--------IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 185
Query: 128 SNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+ VGT Y+SPE SD+++ G ++ + ++
Sbjct: 186 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 226
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 18/161 (11%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILI-YEYMPNKSLDCFL-----FDPTKTGLLGW 67
E ++++L H V+L+ + EK+ Y N L ++ FD T T
Sbjct: 78 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 136
Query: 68 EMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQ 127
E + L YLH +IHRDLK NILL+ +M+ +I+DFG A++ + Q
Sbjct: 137 E--------IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 185
Query: 128 SNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+ VGT Y+SPE SD+++ G ++ + ++
Sbjct: 186 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 226
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 18/161 (11%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILI-YEYMPNKSLDCFL-----FDPTKTGLLGW 67
E ++++L H V+L+ + EK+ Y N L ++ FD T T
Sbjct: 57 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 115
Query: 68 EMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQ 127
E + L YLH +IHRDLK NILL+ +M+ +I+DFG A++ + Q
Sbjct: 116 E--------IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 164
Query: 128 SNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+ VGT Y+SPE SD+++ G ++ + ++
Sbjct: 165 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 205
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
+E E ++ +L + +VR+ G C E +L+ E L+ +L + + +
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKN 128
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDE---- 125
+ ++ V+ G+ YL + +HRDL A N+LL + KISDFG+++ DE
Sbjct: 129 IIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 185
Query: 126 LQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
Q++ K V Y +PE FS KSDV+SFGVL+ E S
Sbjct: 186 AQTHGKWPVKWY---APECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
+E E ++ +L + +VR+ G C E +L+ E L+ +L + + +
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKN 128
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDE---- 125
+ ++ V+ G+ YL + +HRDL A N+LL + KISDFG+++ DE
Sbjct: 129 IIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 185
Query: 126 LQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
Q++ K V Y +PE FS KSDV+SFGVL+ E S
Sbjct: 186 AQTHGKWPVKWY---APECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
+E E ++ +L + +VR+ G C E +L+ E L+ +L + + +
Sbjct: 63 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKN 118
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDE---- 125
+ ++ V+ G+ YL + +HRDL A N+LL + KISDFG+++ DE
Sbjct: 119 IIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 175
Query: 126 LQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
Q++ K V Y +PE FS KSDV+SFGVL+ E S
Sbjct: 176 AQTHGKWPVKWY---APECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
+E E ++ +L + +VR+ G C E +L+ E L+ +L + + +
Sbjct: 51 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKN 106
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDE---- 125
+ ++ V+ G+ YL + +HRDL A N+LL + KISDFG+++ DE
Sbjct: 107 IIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 163
Query: 126 LQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
Q++ K V Y +PE FS KSDV+SFGVL+ E S
Sbjct: 164 AQTHGKWPVKWY---APECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
+E E ++ +L + +VR+ G C E +L+ E L+ +L + + +
Sbjct: 57 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKN 112
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDE---- 125
+ ++ V+ G+ YL + +HRDL A N+LL + KISDFG+++ DE
Sbjct: 113 IIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYK 169
Query: 126 LQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
Q++ K V Y +PE FS KSDV+SFGVL+ E S
Sbjct: 170 AQTHGKWPVKWY---APECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
+E E ++ +L + +VR+ G C E +L+ E L+ +L + + +
Sbjct: 53 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKN 108
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDE---- 125
+ ++ V+ G+ YL + +HRDL A N+LL + KISDFG+++ DE
Sbjct: 109 IIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 165
Query: 126 LQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
Q++ K V Y +PE FS KSDV+SFGVL+ E S
Sbjct: 166 AQTHGKWPVKWY---APECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
A+ +L L H V++RDLK +NILLD + + +ISD G+A F + ++ VGT
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGT 353
Query: 137 YGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAWNLWNDGR 195
+GYM+PE +G+ + +D FS G ++ + L + T H +
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD----KHEIDRMTLTM 409
Query: 196 AWELMDSILQNDASY--PMLNRYINVALLCVQENAAD 230
A EL DS S +L R +N L C+ A +
Sbjct: 410 AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQE 446
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
A+ +L L H V++RDLK +NILLD + + +ISD G+A F + ++ VGT
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGT 353
Query: 137 YGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAWNLWNDGR 195
+GYM+PE +G+ + +D FS G ++ + L + T H +
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD----KHEIDRMTLTM 409
Query: 196 AWELMDSILQNDASY--PMLNRYINVALLCVQENAAD 230
A EL DS S +L R +N L C+ A +
Sbjct: 410 AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQE 446
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
+E E ++ +L + +VR+ G C E +L+ E L+ +L + + +
Sbjct: 71 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKN 126
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDE---- 125
+ ++ V+ G+ YL + +HRDL A N+LL + KISDFG+++ DE
Sbjct: 127 IIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 183
Query: 126 LQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
Q++ K V Y +PE FS KSDV+SFGVL+ E S
Sbjct: 184 AQTHGKWPVKWY---APECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 79 QGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGTYG 138
QG+ YLH+ RVIHRDLK N+ L+ +M+ KI DFG+A D + T + GT
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT--LCGTPN 207
Query: 139 YMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
Y++PE + S + D++S G ++ L K
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 75/164 (45%), Gaps = 11/164 (6%)
Query: 8 GLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
G+E + + E+ + + L+H N++RL+G + LI EY P L + K
Sbjct: 53 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFD 109
Query: 67 WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL 126
+ + +A L Y H RVIHRD+K N+LL S KI++FG +
Sbjct: 110 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFG----WSVHAP 162
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
S + GT Y+ PE + K D++S GVL E L K
Sbjct: 163 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
+E E ++ +L + +VR+ G C E +L+ E L+ +L + + +
Sbjct: 57 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKN 112
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDE---- 125
+ ++ V+ G+ YL + +HRDL A N+LL + KISDFG+++ DE
Sbjct: 113 IIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 169
Query: 126 LQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
Q++ K V Y +PE FS KSDV+SFGVL+ E S
Sbjct: 170 AQTHGKWPVKWY---APECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 82/157 (52%), Gaps = 9/157 (5%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
NE++++ + ++ N+V + E ++ EY+ SL + T+T + ++
Sbjct: 67 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVC 123
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
E + Q L +LH +VIHR++K+ NILL + + K++DFG + QS +
Sbjct: 124 RECL-QALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSTM 177
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
VGT +M+PE R + K D++S G++ +E + +
Sbjct: 178 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
A+ +L L H V++RDLK +NILLD + + +ISD G+A F + ++ VGT
Sbjct: 297 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGT 352
Query: 137 YGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAWNLWNDGR 195
+GYM+PE +G+ + +D FS G ++ + L + T H +
Sbjct: 353 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD----KHEIDRMTLTM 408
Query: 196 AWELMDSILQNDASY--PMLNRYINVALLCVQENAAD 230
A EL DS S +L R +N L C+ A +
Sbjct: 409 AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQE 445
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 79 QGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGTYG 138
QG+ YLH+ RVIHRDLK N+ L+ +M+ KI DFG+A D K + GT
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD--GERKKXLCGTPN 207
Query: 139 YMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
Y++PE + S + D++S G ++ L K
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
A+ +L L H V++RDLK +NILLD + + +ISD G+A F + ++ VGT
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGT 353
Query: 137 YGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAWNLWNDGR 195
+GYM+PE +G+ + +D FS G ++ + L + T H +
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD----KHEIDRMTLTM 409
Query: 196 AWELMDSILQNDASY--PMLNRYINVALLCVQENAAD 230
A EL DS S +L R +N L C+ A +
Sbjct: 410 AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQE 446
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 84/193 (43%), Gaps = 48/193 (24%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMP---NKSLDCFLFDP------- 59
E+ + E+ +AKL H N+V GC ++Y P + SL+ +DP
Sbjct: 50 EKAEREVKALAKLDHVNIVHYNGCWDG-------FDYDPETSDDSLESSDYDPENSKNSS 102
Query: 60 -TKTGLLGWEMR------------------------VRILEGVAQGLLYLHHYSRLRVIH 94
+KT L +M + + E + +G+ Y+H ++IH
Sbjct: 103 RSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLIH 159
Query: 95 RDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKS 154
RDLK SNI L KI DFG+ D ++ +K GT YMSPE + +
Sbjct: 160 RDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSK---GTLRYMSPEQISSQDYGKEV 216
Query: 155 DVFSFGVLVLETL 167
D+++ G+++ E L
Sbjct: 217 DLYALGLILAELL 229
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 79 QGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGTYG 138
QG+ YLH+ RVIHRDLK N+ L+ +M+ KI DFG+A D K + GT
Sbjct: 137 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD--GERKKDLCGTPN 191
Query: 139 YMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
Y++PE + S + D++S G ++ L K
Sbjct: 192 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 223
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 84/156 (53%), Gaps = 9/156 (5%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRIL 74
E+ ++ +L+H N+V+L+ +L++E++ ++ L L D + GL + +L
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLL-DVCEGGLESVTAKSFLL 107
Query: 75 EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIV 134
+ + G+ Y H RV+HRDLK N+L++ KI+DFG+AR F G ++ T IV
Sbjct: 108 Q-LLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEIV 162
Query: 135 GTYGYMSPEYAL-RGLFSIKSDVFSFGVLVLETLSS 169
T Y +P+ + +S D++S G + E ++
Sbjct: 163 -TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 79 QGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGTYG 138
QG+ YLH+ RVIHRDLK N+ L+ +M+ KI DFG+A D K + GT
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD--GERKKDLCGTPN 207
Query: 139 YMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
Y++PE + S + D++S G ++ L K
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
+E E ++ +L + +VR+ G C E +L+ E L+ +L + + +
Sbjct: 415 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKN 470
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDE---- 125
+ ++ V+ G+ YL + +HRDL A N+LL + KISDFG+++ DE
Sbjct: 471 IIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 527
Query: 126 LQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
Q++ K V Y +PE FS KSDV+SFGVL+ E S
Sbjct: 528 AQTHGKWPVKWY---APECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 100/219 (45%), Gaps = 32/219 (14%)
Query: 28 VRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTG-LLGWEMRVRILEGVAQGLLYLHH 86
V +G G+ + I + + SLD F G + ++ +I + + L +LH
Sbjct: 96 VTFYGALFREGD-VWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH- 153
Query: 87 YSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGTYGYMSPEYAL 146
S+L VIHRD+K SN+L+++ K DFGI+ D + G Y +PE
Sbjct: 154 -SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDID---AGCKPYXAPERIN 209
Query: 147 RGL----FSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAWNLWNDGRAWELMDS 202
L +S+KSD++S G+ +E L +L ++ W G ++ +
Sbjct: 210 PELNQKGYSVKSDIWSLGITXIE---------------LAILRFPYDSW--GTPFQQLKQ 252
Query: 203 ILQNDASYPMLNR----YINVALLCVQENAADRPTMLEV 237
+++ + ++ +++ C+++N+ +RPT E+
Sbjct: 253 VVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPEL 291
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 13/162 (8%)
Query: 15 EMMLIAKLQHRNLVRL----FGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
E+ ++ + +H N++ + IE + + I + + ++ L+ KT L +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHI 126
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN- 129
L + +GL Y+H + V+HRDLK SN+LL++ + KI DFG+AR+ D +
Sbjct: 127 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGF 183
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
V T Y +PE L KS D++S G ++ E LS++
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 13/162 (8%)
Query: 15 EMMLIAKLQHRNLVRL----FGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
E+ ++ + +H N++ + IE + + I + + ++ L+ KT L +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHI 126
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN- 129
L + +GL Y+H + V+HRDLK SN+LL++ + KI DFG+AR+ D +
Sbjct: 127 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 183
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
V T Y +PE L KS D++S G ++ E LS++
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 81/163 (49%), Gaps = 12/163 (7%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
L++ E+ ++ L H N+V+LF LI EY + +L + + E
Sbjct: 55 LQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR--MKEKE 112
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG-GDELQ 127
R + + + + Y H R++HRDLKA N+LLD++MN KI+DFG + F G +L
Sbjct: 113 ARSKFRQ-IVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLD 168
Query: 128 SNTKRIVGTYGYMSPE-YALRGLFSIKSDVFSFGVLVLETLSS 169
+ G+ Y +PE + + + DV+S GV++ +S
Sbjct: 169 T----FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
+E E ++ +L + +VR+ G C E +L+ E L+ +L + + +
Sbjct: 416 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKN 471
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDE---- 125
+ ++ V+ G+ YL + +HRDL A N+LL + KISDFG+++ DE
Sbjct: 472 IIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 528
Query: 126 LQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
Q++ K V Y +PE FS KSDV+SFGVL+ E S
Sbjct: 529 AQTHGKWPVKWY---APECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 13/162 (8%)
Query: 15 EMMLIAKLQHRNLVRL----FGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
E+ ++ + +H N++ + IE + + I + + ++ L+ KT L +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHI 130
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN- 129
L + +GL Y+H + V+HRDLK SN+LL++ + KI DFG+AR+ D +
Sbjct: 131 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 187
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
V T Y +PE L KS D++S G ++ E LS++
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 13/162 (8%)
Query: 15 EMMLIAKLQHRNLVRL----FGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
E+ ++ + +H N++ + IE + + I + + ++ L+ KT L +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHI 130
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN- 129
L + +GL Y+H + V+HRDLK SN+LL++ + KI DFG+AR+ D +
Sbjct: 131 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 187
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
V T Y +PE L KS D++S G ++ E LS++
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
Query: 13 KNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVR 72
K E ++A + H +V+L G+ LI +++ L L +K + E
Sbjct: 78 KMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKF 134
Query: 73 ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKR 132
L +A GL +LH L +I+RDLK NILLD + K++DFG+++ E ++ +
Sbjct: 135 YLAELALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS-- 189
Query: 133 IVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
GT YM+PE R S +D +S+GVL+ E L+
Sbjct: 190 FCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLT 225
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 11/159 (6%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
+E+ + E+ ++ L H N++++F ++ ++ E L + G E
Sbjct: 64 MEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSE 123
Query: 69 MRV-RILEGVAQGLLYLHHYSRLRVIHRDLKASNILLD--SNMNP-KISDFGIARLFGGD 124
V +++ + L Y H V+H+DLK NIL S +P KI DFG+A LF D
Sbjct: 124 GYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD 180
Query: 125 ELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLV 163
E +N GT YM+PE R + + K D++S GV++
Sbjct: 181 EHSTNA---AGTALYMAPEVFKRDV-TFKCDIWSAGVVM 215
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 13/162 (8%)
Query: 15 EMMLIAKLQHRNLVRL----FGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
E+ ++ + +H N++ + IE + + I + + ++ L+ KT L +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHI 126
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN- 129
L + +GL Y+H + V+HRDLK SN+LL++ + KI DFG+AR+ D +
Sbjct: 127 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 183
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
V T Y +PE L KS D++S G ++ E LS++
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 16/153 (10%)
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
L + G YLH R RVIHRDLK N+ L+ ++ KI DFG+A D + T +
Sbjct: 127 LRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--L 181
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSL--TLLGHAWNLW 191
GT Y++PE + S + DV+S G ++ L K + T L T L N +
Sbjct: 182 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP---FETSCLKETYLRIKKNEY 238
Query: 192 NDGR-----AWELMDSILQNDAS-YPMLNRYIN 218
+ + A L+ +LQ D + P +N +N
Sbjct: 239 SIPKHINPVAASLIQKMLQTDPTARPTINELLN 271
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 84/156 (53%), Gaps = 9/156 (5%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRIL 74
E+ ++ +L+H N+V+L+ +L++E++ ++ L L D + GL + +L
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLL-DVCEGGLESVTAKSFLL 107
Query: 75 EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIV 134
+ + G+ Y H RV+HRDLK N+L++ KI+DFG+AR F G ++ T +V
Sbjct: 108 Q-LLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVV 162
Query: 135 GTYGYMSPEYAL-RGLFSIKSDVFSFGVLVLETLSS 169
T Y +P+ + +S D++S G + E ++
Sbjct: 163 -TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 13/162 (8%)
Query: 15 EMMLIAKLQHRNLVRL----FGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
E+ ++ + +H N++ + IE + + I + + ++ L+ KT L +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHI 126
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN- 129
L + +GL Y+H + V+HRDLK SN+LL++ + KI DFG+AR+ D +
Sbjct: 127 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 183
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
V T Y +PE L KS D++S G ++ E LS++
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 16/153 (10%)
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
L + G YLH R RVIHRDLK N+ L+ ++ KI DFG+A D + T +
Sbjct: 123 LRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--L 177
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSL--TLLGHAWNLW 191
GT Y++PE + S + DV+S G ++ L K + T L T L N +
Sbjct: 178 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP---FETSCLKETYLRIKKNEY 234
Query: 192 NDGR-----AWELMDSILQNDAS-YPMLNRYIN 218
+ + A L+ +LQ D + P +N +N
Sbjct: 235 SIPKHINPVAASLIQKMLQTDPTARPTINELLN 267
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 13/162 (8%)
Query: 15 EMMLIAKLQHRNLVRL----FGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
E+ ++ + +H N++ + IE + + I + + ++ L+ KT L +
Sbjct: 73 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHI 128
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN- 129
L + +GL Y+H + V+HRDLK SN+LL++ + KI DFG+AR+ D +
Sbjct: 129 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 185
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
V T Y +PE L KS D++S G ++ E LS++
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 84/156 (53%), Gaps = 9/156 (5%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRIL 74
E+ ++ +L+H N+V+L+ +L++E++ ++ L L D + GL + +L
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLL-DVCEGGLESVTAKSFLL 107
Query: 75 EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIV 134
+ + G+ Y H RV+HRDLK N+L++ KI+DFG+AR F G ++ T +V
Sbjct: 108 Q-LLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVV 162
Query: 135 GTYGYMSPEYAL-RGLFSIKSDVFSFGVLVLETLSS 169
T Y +P+ + +S D++S G + E ++
Sbjct: 163 -TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 13/162 (8%)
Query: 15 EMMLIAKLQHRNLVRL----FGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
E+ ++ + +H N++ + IE + + I + + ++ L+ KT L +
Sbjct: 76 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHI 131
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN- 129
L + +GL Y+H + V+HRDLK SN+LL++ + KI DFG+AR+ D +
Sbjct: 132 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 188
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
V T Y +PE L KS D++S G ++ E LS++
Sbjct: 189 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 13/163 (7%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
L++ E+ ++ L H N+V+LF LI EY + +L + + E
Sbjct: 58 LQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR--MKEKE 115
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG-GDELQ 127
R + + + + Y H R++HRDLKA N+LLD++MN KI+DFG + F G +L
Sbjct: 116 ARSKFRQ-IVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLD 171
Query: 128 SNTKRIVGTYGYMSPE-YALRGLFSIKSDVFSFGVLVLETLSS 169
+ G Y +PE + + + DV+S GV +L TL S
Sbjct: 172 A----FCGAPPYAAPELFQGKKYDGPEVDVWSLGV-ILYTLVS 209
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 13/162 (8%)
Query: 15 EMMLIAKLQHRNLVRL----FGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
E+ ++ + +H N++ + IE + + I + + ++ L+ KT L +
Sbjct: 77 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHI 132
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN- 129
L + +GL Y+H + V+HRDLK SN+LL++ + KI DFG+AR+ D +
Sbjct: 133 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 189
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
V T Y +PE L KS D++S G ++ E LS++
Sbjct: 190 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 13/162 (8%)
Query: 15 EMMLIAKLQHRNLVRL----FGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
E+ ++ + +H N++ + IE + + I + + ++ L+ KT L +
Sbjct: 68 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHI 123
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN- 129
L + +GL Y+H + V+HRDLK SN+LL++ + KI DFG+AR+ D +
Sbjct: 124 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 180
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
V T Y +PE L KS D++S G ++ E LS++
Sbjct: 181 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 13/162 (8%)
Query: 15 EMMLIAKLQHRNLVRL----FGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
E+ ++ + +H N++ + IE + + I + + ++ L+ KT L +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHI 130
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN- 129
L + +GL Y+H + V+HRDLK SN+LL++ + KI DFG+AR+ D +
Sbjct: 131 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 187
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
V T Y +PE L KS D++S G ++ E LS++
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 16/153 (10%)
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
L + G YLH R RVIHRDLK N+ L+ ++ KI DFG+A D + T +
Sbjct: 123 LRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--L 177
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSL--TLLGHAWNLW 191
GT Y++PE + S + DV+S G ++ L K + T L T L N +
Sbjct: 178 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP---FETSCLKETYLRIKKNEY 234
Query: 192 NDGR-----AWELMDSILQNDAS-YPMLNRYIN 218
+ + A L+ +LQ D + P +N +N
Sbjct: 235 SIPKHINPVAASLIQKMLQTDPTARPTINELLN 267
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 81/163 (49%), Gaps = 33/163 (20%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVR- 72
+E+ ++ +L H N+++L YE+ +K + + + G L E+ +R
Sbjct: 53 DEVAVLKQLDHPNIMKL-------------YEFFEDKRNYYLVMEVYRGGELFDEIILRQ 99
Query: 73 ---------ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP---KISDFGIARL 120
I++ V G YLH ++ ++HRDLK N+LL+S KI DFG++
Sbjct: 100 KFSEVDAAVIMKQVLSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAH 156
Query: 121 FGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLV 163
F E+ K +GT Y++PE LR + K DV+S GV++
Sbjct: 157 F---EVGGKMKERLGTAYYIAPE-VLRKKYDEKCDVWSCGVIL 195
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
VA+G+ +L + + IHRDL A NILL KI DFG+AR D
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+M+PE +++I+SDV+SFGVL+ E S
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 13/162 (8%)
Query: 15 EMMLIAKLQHRNLVRL----FGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
E+ ++ + +H N++ + IE + + I + + ++ L+ KT L +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHI 130
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN- 129
L + +GL Y+H + V+HRDLK SN+LL++ + KI DFG+AR+ D +
Sbjct: 131 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 187
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
V T Y +PE L KS D++S G ++ E LS++
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 13/162 (8%)
Query: 15 EMMLIAKLQHRNLVRL----FGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
E+ ++ + +H N++ + IE + + I + + ++ L+ KT L +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHI 130
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN- 129
L + +GL Y+H + V+HRDLK SN+LL++ + KI DFG+AR+ D +
Sbjct: 131 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 187
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
V T Y +PE L KS D++S G ++ E LS++
Sbjct: 188 LXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 13/162 (8%)
Query: 15 EMMLIAKLQHRNLVRL----FGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
E+ ++ + +H N++ + IE + + I + + ++ L+ KT L +
Sbjct: 69 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHI 124
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN- 129
L + +GL Y+H + V+HRDLK SN+LL++ + KI DFG+AR+ D +
Sbjct: 125 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 181
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
V T Y +PE L KS D++S G ++ E LS++
Sbjct: 182 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 13/162 (8%)
Query: 15 EMMLIAKLQHRNLVRL----FGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
E+ ++ + +H N++ + IE + + I + + ++ L+ KT L +
Sbjct: 76 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHI 131
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN- 129
L + +GL Y+H + V+HRDLK SN+LL++ + KI DFG+AR+ D +
Sbjct: 132 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 188
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
V T Y +PE L KS D++S G ++ E LS++
Sbjct: 189 LXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 13/162 (8%)
Query: 15 EMMLIAKLQHRNLVRL----FGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
E+ ++ + +H N++ + IE + + I + + ++ L+ KT L +
Sbjct: 79 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHI 134
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN- 129
L + +GL Y+H + V+HRDLK SN+LL++ + KI DFG+AR+ D +
Sbjct: 135 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 191
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
V T Y +PE L KS D++S G ++ E LS++
Sbjct: 192 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 13/162 (8%)
Query: 15 EMMLIAKLQHRNLVRL----FGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
E+ ++ + +H N++ + IE + + I + + ++ L+ KT L +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHI 126
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN- 129
L + +GL Y+H + V+HRDLK SN+LL++ + KI DFG+AR+ D +
Sbjct: 127 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 183
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
V T Y +PE L KS D++S G ++ E LS++
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
VA+G+ +L + + IHRDL A NILL KI DFG+AR D
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+M+PE +++I+SDV+SFGVL+ E S
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 13/162 (8%)
Query: 15 EMMLIAKLQHRNLVRL----FGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
E+ ++ + +H N++ + IE + + I + + ++ L+ KT L +
Sbjct: 69 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHI 124
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN- 129
L + +GL Y+H + V+HRDLK SN+LL++ + KI DFG+AR+ D +
Sbjct: 125 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 181
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
V T Y +PE L KS D++S G ++ E LS++
Sbjct: 182 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
VA+G+ +L + + IHRDL A NILL KI DFG+AR D
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+M+PE +++I+SDV+SFGVL+ E S
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
VA+G+ +L + + IHRDL A NILL KI DFG+AR D
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+M+PE +++I+SDV+SFGVL+ E S
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 79/167 (47%), Gaps = 11/167 (6%)
Query: 2 SSQSGQGLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT 60
S +G+E + + E+ + A L H N++RL+ + LI EY P L L
Sbjct: 59 SQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL---Q 115
Query: 61 KTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARL 120
K+ + I+E +A L+Y H +VIHRD+K N+LL KI+DFG +
Sbjct: 116 KSCTFDEQRTATIMEELADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWS-- 170
Query: 121 FGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETL 167
L+ T + GT Y+ PE + + K D++ GVL E L
Sbjct: 171 VHAPSLRRKT--MCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELL 215
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 13/162 (8%)
Query: 15 EMMLIAKLQHRNLVRL----FGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
E+ ++ + +H N++ + IE + + I + + ++ L+ KT L +
Sbjct: 91 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHI 146
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN- 129
L + +GL Y+H + V+HRDLK SN+LL++ + KI DFG+AR+ D +
Sbjct: 147 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 203
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
V T Y +PE L KS D++S G ++ E LS++
Sbjct: 204 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
EE KNE+ ++ +L H NL++L+ + +L+ EY+ L + D + L
Sbjct: 131 EEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYN--LTELD 188
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILL--DSNMNPKISDFGIARLFGGDELQ 127
+ ++ + +G+ ++H ++ ++H DLK NIL KI DFG+AR + E
Sbjct: 189 TILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE-- 243
Query: 128 SNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
K GT +++PE S +D++S GV+ LS
Sbjct: 244 -KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLS 283
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 21/167 (12%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGW- 67
L++ E+ ++ L H N+V+LF L+ EY + +L GW
Sbjct: 50 LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH------GWM 103
Query: 68 ---EMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG-G 123
E R + + + + Y H ++HRDLKA N+LLD++MN KI+DFG + F G
Sbjct: 104 KEKEARAKFRQ-IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG 159
Query: 124 DELQSNTKRIVGTYGYMSPE-YALRGLFSIKSDVFSFGVLVLETLSS 169
++L + G+ Y +PE + + + DV+S GV +L TL S
Sbjct: 160 NKLDT----FCGSPPYAAPELFQGKKYDGPEVDVWSLGV-ILYTLVS 201
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 72/153 (47%), Gaps = 16/153 (10%)
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
L + G YLH R RVIHRDLK N+ L+ ++ KI DFG+A D K +
Sbjct: 121 LRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD--GERKKVL 175
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSL--TLLGHAWNLW 191
GT Y++PE + S + DV+S G ++ L K + T L T L N +
Sbjct: 176 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP---FETSCLKETYLRIKKNEY 232
Query: 192 NDGR-----AWELMDSILQNDAS-YPMLNRYIN 218
+ + A L+ +LQ D + P +N +N
Sbjct: 233 SIPKHINPVAASLIQKMLQTDPTARPTINELLN 265
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 13/220 (5%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRIL 74
E+ L+ +L+H+N+VRL + L++E+ ++ L + FD + G L E+ L
Sbjct: 51 EICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKY-FD-SCNGDLDPEIVKSFL 107
Query: 75 EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIV 134
+ +GL + H SR V+HRDLK N+L++ N K++DFG+AR FG ++ + +V
Sbjct: 108 FQLLKGLGFCH--SR-NVLHRDLKPQNLLINRNGELKLADFGLARAFGI-PVRCYSAEVV 163
Query: 135 GTYGYMSPEYALRG-LFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAWNLWND 193
T Y P+ L+S D++S G + E L++ F D L + L
Sbjct: 164 -TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAE-LANAARPLFPGNDVDDQLKRIFRLLGT 221
Query: 194 G--RAWELMDSILQNDASYPMLNRYINVALLCVQENAADR 231
W M + L + YPM ++ + + NA R
Sbjct: 222 PTEEQWPSM-TKLPDYKPYPMYPATTSLVNVVPKLNATGR 260
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 75/180 (41%), Gaps = 25/180 (13%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGW-- 67
E+ E+ +AKL+H +VR F +E + P L + K L W
Sbjct: 48 EKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMN 107
Query: 68 -----EMRVR-----ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGI 117
E R R I +A+ + +LH ++HRDLK SNI + K+ DFG+
Sbjct: 108 GRCTIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGL 164
Query: 118 ARLFGGDELQSNT----------KRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETL 167
DE + VGT YMSPE +S K D+FS G+++ E L
Sbjct: 165 VTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 77/155 (49%), Gaps = 11/155 (7%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRIL 74
E+ L+ +L+H NLV L C + L++E++ + LD P L +++ + L
Sbjct: 74 EIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG---LDYQVVQKYL 130
Query: 75 EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIAR-LFGGDELQSNTKRI 133
+ G+ + H ++ +IHRD+K NIL+ + K+ DFG AR L E+ +
Sbjct: 131 FQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE--- 184
Query: 134 VGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETL 167
V T Y +PE + + + DV++ G LV E
Sbjct: 185 VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMF 219
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 72/153 (47%), Gaps = 16/153 (10%)
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
L + G YLH R RVIHRDLK N+ L+ ++ KI DFG+A D K +
Sbjct: 145 LRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD--GERKKVL 199
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSL--TLLGHAWNLW 191
GT Y++PE + S + DV+S G ++ L K + T L T L N +
Sbjct: 200 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP---FETSCLKETYLRIKKNEY 256
Query: 192 NDGR-----AWELMDSILQNDAS-YPMLNRYIN 218
+ + A L+ +LQ D + P +N +N
Sbjct: 257 SIPKHINPVAASLIQKMLQTDPTARPTINELLN 289
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 72/153 (47%), Gaps = 16/153 (10%)
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
L + G YLH R RVIHRDLK N+ L+ ++ KI DFG+A D K +
Sbjct: 147 LRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD--GERKKVL 201
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSL--TLLGHAWNLW 191
GT Y++PE + S + DV+S G ++ L K + T L T L N +
Sbjct: 202 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP---FETSCLKETYLRIKKNEY 258
Query: 192 NDGR-----AWELMDSILQNDAS-YPMLNRYIN 218
+ + A L+ +LQ D + P +N +N
Sbjct: 259 SIPKHINPVAASLIQKMLQTDPTARPTINELLN 291
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 81/163 (49%), Gaps = 33/163 (20%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVR- 72
+E+ ++ +L H N+++L YE+ +K + + + G L E+ +R
Sbjct: 70 DEVAVLKQLDHPNIMKL-------------YEFFEDKRNYYLVMEVYRGGELFDEIILRQ 116
Query: 73 ---------ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP---KISDFGIARL 120
I++ V G YLH ++ ++HRDLK N+LL+S KI DFG++
Sbjct: 117 KFSEVDAAVIMKQVLSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAH 173
Query: 121 FGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLV 163
F E+ K +GT Y++PE LR + K DV+S GV++
Sbjct: 174 F---EVGGKMKERLGTAYYIAPE-VLRKKYDEKCDVWSCGVIL 212
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 23/135 (17%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
++ GL +LH + +I+RDLK N++LDS + KI+DFG+ + D + T+ GT
Sbjct: 129 ISIGLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGV--TTREFCGT 183
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAWNLWNDGRA 196
Y++PE + D +++GVL+ E L+ + + D
Sbjct: 184 PDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED----------------- 226
Query: 197 WELMDSILQNDASYP 211
EL SI++++ SYP
Sbjct: 227 -ELFQSIMEHNVSYP 240
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 8/157 (5%)
Query: 13 KNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVR 72
K E ++ ++ H +V+L G+ LI +++ L F ++ E V+
Sbjct: 74 KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVK 129
Query: 73 ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKR 132
+A+ L L H L +I+RDLK NILLD + K++DFG+++ E ++ +
Sbjct: 130 FY--LAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-- 185
Query: 133 IVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSS 169
GT YM+PE R + +D +SFGVL+ E L+
Sbjct: 186 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 8/157 (5%)
Query: 13 KNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVR 72
K E ++ ++ H +V+L G+ LI +++ L F ++ E V+
Sbjct: 75 KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVK 130
Query: 73 ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKR 132
+A+ L L H L +I+RDLK NILLD + K++DFG+++ E ++ +
Sbjct: 131 FY--LAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-- 186
Query: 133 IVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSS 169
GT YM+PE R + +D +SFGVL+ E L+
Sbjct: 187 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 12/163 (7%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
L++ E+ ++ L H N+V+LF L+ EY + +L + + E
Sbjct: 57 LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKE 114
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG-GDELQ 127
R + + + + Y H ++HRDLKA N+LLD++MN KI+DFG + F G++L
Sbjct: 115 ARAKFRQ-IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD 170
Query: 128 SNTKRIVGTYGYMSPE-YALRGLFSIKSDVFSFGVLVLETLSS 169
+ G+ Y +PE + + + DV+S GV++ +S
Sbjct: 171 T----FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 8/157 (5%)
Query: 13 KNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVR 72
K E ++ ++ H +V+L G+ LI +++ L F ++ E V+
Sbjct: 74 KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVK 129
Query: 73 ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKR 132
+A+ L L H L +I+RDLK NILLD + K++DFG+++ E ++ +
Sbjct: 130 FY--LAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-- 185
Query: 133 IVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSS 169
GT YM+PE R + +D +SFGVL+ E L+
Sbjct: 186 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 13/162 (8%)
Query: 15 EMMLIAKLQHRNLVRL----FGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
E+ ++ + +H N++ + IE + + Y+ + L+ KT L +
Sbjct: 91 EIKILLRFRHENIIGINDIIRAPTIEQMKDV----YLVTHLMGADLYKLLKTQHLSNDHI 146
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN- 129
L + +GL Y+H + V+HRDLK SN+LL++ + KI DFG+AR+ D +
Sbjct: 147 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 203
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
V T Y +PE L KS D++S G ++ E LS++
Sbjct: 204 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 15/161 (9%)
Query: 7 QGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
+ ++ FK E+ ++ L H N++RL+ ++ + L+ E LF+ +
Sbjct: 48 EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGE----LFERVVHKRVF 103
Query: 67 WEM-RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILL--DSNMNP-KISDFGIARLFG 122
E RI++ V + Y H +L V HRDLK N L DS +P K+ DFG+A F
Sbjct: 104 RESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 160
Query: 123 GDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLV 163
++ VGT Y+SP+ L GL+ + D +S GV++
Sbjct: 161 PGKMMRTK---VGTPYYVSPQ-VLEGLYGPECDEWSAGVMM 197
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 13/162 (8%)
Query: 15 EMMLIAKLQHRNLVRL----FGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
E+ ++ +H N++ + IE + + I + + ++ L+ KT L +
Sbjct: 73 EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHI 128
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN- 129
L + +GL Y+H + V+HRDLK SN+LL++ + KI DFG+AR+ D +
Sbjct: 129 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 185
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
V T Y +PE L KS D++S G ++ E LS++
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 80/158 (50%), Gaps = 10/158 (6%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
+ K E+ + +H ++++L+ + ++ EY+ L ++ K G +
Sbjct: 57 KIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI---CKHGRVEEMEA 113
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNT 130
R+ + + + Y H R V+HRDLK N+LLD++MN KI+DFG++ + E ++
Sbjct: 114 RRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS 170
Query: 131 KRIVGTYGYMSPEYALRGLFS-IKSDVFSFGVLVLETL 167
G+ Y +PE L++ + D++S GV++ L
Sbjct: 171 ---CGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALL 205
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 12/163 (7%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
L++ E+ ++ L H N+V+LF L+ EY + +L + + E
Sbjct: 58 LQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKE 115
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG-GDELQ 127
R + + + + Y H ++HRDLKA N+LLD +MN KI+DFG + F G++L
Sbjct: 116 ARAKFRQ-IVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLD 171
Query: 128 SNTKRIVGTYGYMSPE-YALRGLFSIKSDVFSFGVLVLETLSS 169
+ G+ Y +PE + + + DV+S GV++ +S
Sbjct: 172 T----FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 12/163 (7%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
L++ E+ ++ L H N+V+LF L+ EY + +L + + E
Sbjct: 57 LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKE 114
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG-GDELQ 127
R + + + + Y H ++HRDLKA N+LLD++MN KI+DFG + F G++L
Sbjct: 115 ARAKFRQ-IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD 170
Query: 128 SNTKRIVGTYGYMSPE-YALRGLFSIKSDVFSFGVLVLETLSS 169
+ G+ Y +PE + + + DV+S GV++ +S
Sbjct: 171 T----FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 15/161 (9%)
Query: 7 QGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG 66
+ ++ FK E+ ++ L H N++RL+ ++ + L+ E LF+ +
Sbjct: 65 EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGE----LFERVVHKRVF 120
Query: 67 WEM-RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILL--DSNMNP-KISDFGIARLFG 122
E RI++ V + Y H +L V HRDLK N L DS +P K+ DFG+A F
Sbjct: 121 RESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 177
Query: 123 GDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLV 163
++ VGT Y+SP+ L GL+ + D +S GV++
Sbjct: 178 PGKMMRTK---VGTPYYVSPQ-VLEGLYGPECDEWSAGVMM 214
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 13/162 (8%)
Query: 15 EMMLIAKLQHRNLVRL----FGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
E+ ++ +H N++ + IE + + I + + ++ L+ KT L +
Sbjct: 73 EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHI 128
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN- 129
L + +GL Y+H + V+HRDLK SN+LL++ + KI DFG+AR+ D +
Sbjct: 129 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGF 185
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
V T Y +PE L KS D++S G ++ E LS++
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 12/163 (7%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
L++ E+ ++ L H N+V+LF L+ EY + +L + + E
Sbjct: 57 LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKE 114
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG-GDELQ 127
R + + + + Y H ++HRDLKA N+LLD++MN KI+DFG + F G++L
Sbjct: 115 ARAKFRQ-IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD 170
Query: 128 SNTKRIVGTYGYMSPE-YALRGLFSIKSDVFSFGVLVLETLSS 169
+ G+ Y +PE + + + DV+S GV++ +S
Sbjct: 171 T----FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 74/155 (47%), Gaps = 14/155 (9%)
Query: 13 KNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDP-TKTGLLGWEMRV 71
+NE+ ++ K++H N+V L L+ + + L FD + G +
Sbjct: 68 ENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGEL----FDRIVEKGFYTEKDAS 123
Query: 72 RILEGVAQGLLYLHHYSRLRVIHRDLKASNILL---DSNMNPKISDFGIARLFGGDELQS 128
++ V + YLH R+ ++HRDLK N+L D ISDFG++++ G ++ S
Sbjct: 124 TLIRQVLDAVYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMS 180
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLV 163
GT GY++PE + +S D +S GV+
Sbjct: 181 TA---CGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 212
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 14/166 (8%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT 60
LS++ Q LE E + L+H N+VRL E G L+++ + L D
Sbjct: 42 LSARDHQKLE---REARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIV 95
Query: 61 KTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP---KISDFGI 117
++ + + +L+ H ++ V+HRDLK N+LL S K++DFG+
Sbjct: 96 AREYYSEADASHCIQQILEAVLHCH---QMGVVHRDLKPENLLLASKCKGAAVKLADFGL 152
Query: 118 ARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLV 163
A GD Q GT GY+SPE + + D+++ GV++
Sbjct: 153 AIEVQGD--QQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVIL 196
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 85/184 (46%), Gaps = 30/184 (16%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCF--------LFDPTKTGLLG 66
E++L+ + H+N++ L + P KSL+ F L D + ++
Sbjct: 73 ELVLMKVVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQ 120
Query: 67 WEM-RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDE 125
E+ R+ + Q L+ + H +IHRDLK SNI++ S+ KI DFG+AR G
Sbjct: 121 MELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSF 180
Query: 126 LQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLG 185
+ T +V Y Y +PE L + D++S GV++ E + K F TD +
Sbjct: 181 MM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGVIMGEMI--KGGVLFPGTDHID--- 232
Query: 186 HAWN 189
WN
Sbjct: 233 -QWN 235
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 24/167 (14%)
Query: 23 QHRNLVRLFGCCIEHGEKIL-IYEYMPNKSL-----DCFLFDPTKTGLLGWEMRVRILEG 76
+H L +F C + E + + EY+ L C FD ++ E
Sbjct: 77 EHPFLTHMF-CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAE-------- 127
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIAR--LFGGDELQSNTKRIV 134
+ GL +LH +++RDLK NILLD + + KI+DFG+ + + G + T
Sbjct: 128 IILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLG----DAKTNEFC 180
Query: 135 GTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSL 181
GT Y++PE L ++ D +SFGVL+ E L + H + + L
Sbjct: 181 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL 227
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 85/184 (46%), Gaps = 30/184 (16%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCF--------LFDPTKTGLLG 66
E++L+ + H+N++ L + P KSL+ F L D + ++
Sbjct: 73 ELVLMKVVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQ 120
Query: 67 WEM-RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDE 125
E+ R+ + Q L+ + H +IHRDLK SNI++ S+ KI DFG+AR G
Sbjct: 121 MELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSF 180
Query: 126 LQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLG 185
+ T +V Y Y +PE L + D++S GV++ E + K F TD +
Sbjct: 181 MM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGVIMGEMI--KGGVLFPGTDHID--- 232
Query: 186 HAWN 189
WN
Sbjct: 233 -QWN 235
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 23/135 (17%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
+A GL +L +I+RDLK N++LDS + KI+DFG+ + D + TK GT
Sbjct: 451 IAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV--TTKXFCGT 505
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAWNLWNDGRA 196
Y++PE + D ++FGVL+ E L+ + A F D
Sbjct: 506 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ--APFEGEDED--------------- 548
Query: 197 WELMDSILQNDASYP 211
EL SI++++ +YP
Sbjct: 549 -ELFQSIMEHNVAYP 562
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 82/153 (53%), Gaps = 13/153 (8%)
Query: 13 KNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVR 72
+ E+ + L+H ++++L+ + +++ EY + D + K + E R R
Sbjct: 57 EREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIV---EKKRMTEDEGR-R 112
Query: 73 ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF-GGDELQSNTK 131
+ + + Y H R +++HRDLK N+LLD N+N KI+DFG++ + G+ L+++
Sbjct: 113 FFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC- 168
Query: 132 RIVGTYGYMSPEYALRGLFS-IKSDVFSFGVLV 163
G+ Y +PE L++ + DV+S G+++
Sbjct: 169 ---GSPNYAAPEVINGKLYAGPEVDVWSCGIVL 198
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 12/163 (7%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
L++ E+ ++ L H N+V+LF L+ EY + +L + + E
Sbjct: 57 LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKE 114
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG-GDELQ 127
R + + + + Y H ++HRDLKA N+LLD++MN KI+DFG + F G++L
Sbjct: 115 ARAKFRQ-IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD 170
Query: 128 SNTKRIVGTYGYMSPE-YALRGLFSIKSDVFSFGVLVLETLSS 169
+ G Y +PE + + + DV+S GV++ +S
Sbjct: 171 A----FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 11 EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR 70
+ K E+ + +H ++++L+ + ++ EY+ L ++ K G +
Sbjct: 57 KIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI---CKHGRVEEMEA 113
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNT 130
R+ + + + Y H R V+HRDLK N+LLD++MN KI+DFG++ + E +
Sbjct: 114 RRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS 170
Query: 131 KRIVGTYGYMSPEYALRGLFS-IKSDVFSFGVLVLETL 167
G+ Y +PE L++ + D++S GV++ L
Sbjct: 171 ---CGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALL 205
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 27/148 (18%)
Query: 39 EKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRILEGVAQGLLYLH-------HYSRLR 91
E +L+ EY PN SL +L T W R+ V +GL YLH HY +
Sbjct: 86 EYLLVMEYYPNGSLXKYLSLHTSD----WVSSCRLAHSVTRGLAYLHTELPRGDHY-KPA 140
Query: 92 VIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL----QSNTKRI--VGTYGYMSPEYA 145
+ HRDL + N+L+ ++ ISDFG++ G+ L + + I VGT YM+PE
Sbjct: 141 ISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPE-V 199
Query: 146 LRGLFSIKS--------DVFSFGVLVLE 165
L G +++ D+++ G++ E
Sbjct: 200 LEGAVNLRDXESALKQVDMYALGLIYWE 227
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 12/163 (7%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
L++ E+ ++ L H N+V+LF L+ EY + +L + + E
Sbjct: 57 LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKE 114
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG-GDELQ 127
R + + + + Y H ++HRDLKA N+LLD++MN KI+DFG + F G++L
Sbjct: 115 ARAKFRQ-IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD 170
Query: 128 SNTKRIVGTYGYMSPE-YALRGLFSIKSDVFSFGVLVLETLSS 169
G+ Y +PE + + + DV+S GV++ +S
Sbjct: 171 E----FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 24/167 (14%)
Query: 23 QHRNLVRLFGCCIEHGEKIL-IYEYMPNKSL-----DCFLFDPTKTGLLGWEMRVRILEG 76
+H L +F C + E + + EY+ L C FD ++ E
Sbjct: 76 EHPFLTHMF-CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAE-------- 126
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIAR--LFGGDELQSNTKRIV 134
+ GL +LH +++RDLK NILLD + + KI+DFG+ + + G + T
Sbjct: 127 IILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLG----DAKTNXFC 179
Query: 135 GTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSL 181
GT Y++PE L ++ D +SFGVL+ E L + H + + L
Sbjct: 180 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL 226
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 23/135 (17%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
+A GL +L +I+RDLK N++LDS + KI+DFG+ + D + TK GT
Sbjct: 130 IAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV--TTKXFCGT 184
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAWNLWNDGRA 196
Y++PE + D ++FGVL+ E L+ + A F D
Sbjct: 185 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ--APFEGEDED--------------- 227
Query: 197 WELMDSILQNDASYP 211
EL SI++++ +YP
Sbjct: 228 -ELFQSIMEHNVAYP 241
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 15/163 (9%)
Query: 4 QSGQGLEE-FKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT-K 61
+ G+ ++E K E++ L+H N+VR + ++ EY L F+
Sbjct: 53 ERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL----FERICN 108
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP--KISDFGIAR 119
G + + + G+ Y H ++V HRDLK N LLD + P KI+DFG ++
Sbjct: 109 AGRFSEDEARFFFQQLISGVSYAH---AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSK 165
Query: 120 LFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIK-SDVFSFGV 161
L S K VGT Y++PE L+ + K +DV+S GV
Sbjct: 166 ---ASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGV 205
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 5/100 (5%)
Query: 73 ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN-TK 131
L + +GL Y+H + V+HRDLK SN+LL++ + KI DFG+AR+ D +
Sbjct: 133 FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 132 RIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
V T Y +PE L KS D++S G ++ E LS++
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 14/155 (9%)
Query: 13 KNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDP-TKTGLLGWEMRV 71
+NE+ ++ K++H N+V L G LI + + L FD + G
Sbjct: 64 ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDAS 119
Query: 72 RILEGVAQGLLYLHHYSRLRVIHRDLKASNIL---LDSNMNPKISDFGIARLFGGDELQS 128
R++ V + YLH L ++HRDLK N+L LD + ISDFG++++ ++ S
Sbjct: 120 RLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGS 173
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLV 163
GT GY++PE + +S D +S GV+
Sbjct: 174 VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 208
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 14/166 (8%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT 60
LS++ Q LE E + L+H N+VRL E G LI++ + L D
Sbjct: 60 LSARDHQKLE---REARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL---FEDIV 113
Query: 61 KTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP---KISDFGI 117
++ + + +L+ H ++ V+HRDLK N+LL S + K++DFG+
Sbjct: 114 AREYYSEADASHCIQQILEAVLHCH---QMGVVHRDLKPENLLLASKLKGAAVKLADFGL 170
Query: 118 ARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLV 163
A G+ Q GT GY+SPE + + D+++ GV++
Sbjct: 171 AIEVEGE--QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVIL 214
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
V + +L L H +L +I+RD+K NILLDSN + ++DFG+++ F DE + GT
Sbjct: 165 VGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE-RAYDFCGT 223
Query: 137 YGYMSPEYALRGLFSIKS---DVFSFGVLVLETLSS 169
YM+P+ +RG S D +S GVL+ E L+
Sbjct: 224 IEYMAPD-IVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 1 LSSQSGQGLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDP 59
++ ++ +G E +NE+ ++ K++H N+V L G LI + + L FD
Sbjct: 51 IAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL----FDR 106
Query: 60 -TKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNIL---LDSNMNPKISDF 115
+ G R++ V + YLH L ++HRDLK N+L LD + ISDF
Sbjct: 107 IVEKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDF 163
Query: 116 GIARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLV 163
G++++ ++ S GT GY++PE + +S D +S GV+
Sbjct: 164 GLSKM---EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 208
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 1 LSSQSGQGLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDP 59
++ ++ +G E +NE+ ++ K++H N+V L G LI + + L FD
Sbjct: 51 IAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL----FDR 106
Query: 60 -TKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNIL---LDSNMNPKISDF 115
+ G R++ V + YLH L ++HRDLK N+L LD + ISDF
Sbjct: 107 IVEKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDF 163
Query: 116 GIARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLV 163
G++++ ++ S GT GY++PE + +S D +S GV+
Sbjct: 164 GLSKM---EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 208
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 13/220 (5%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRIL 74
E+ L+ +L+H+N+VRL + L++E+ ++ L + FD + G L E+ L
Sbjct: 51 EICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKY-FD-SCNGDLDPEIVKSFL 107
Query: 75 EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIV 134
+ +GL + H + V+HRDLK N+L++ N K+++FG+AR FG ++ + +V
Sbjct: 108 FQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGI-PVRCYSAEVV 163
Query: 135 GTYGYMSPEYALRG-LFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAWNLWND 193
T Y P+ L+S D++S G + E L++ F D L + L
Sbjct: 164 -TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAE-LANAGRPLFPGNDVDDQLKRIFRLLGT 221
Query: 194 G--RAWELMDSILQNDASYPMLNRYINVALLCVQENAADR 231
W M + L + YPM ++ + + NA R
Sbjct: 222 PTEEQWPSM-TKLPDYKPYPMYPATTSLVNVVPKLNATGR 260
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 80 GLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGTYGY 139
GL LH R R+++RDLK NILLD + + +ISD G+A E Q+ R VGT GY
Sbjct: 298 GLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGR-VGTVGY 351
Query: 140 MSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
M+PE ++ D ++ G L+ E ++ +
Sbjct: 352 MAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 14/155 (9%)
Query: 13 KNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDP-TKTGLLGWEMRV 71
+NE+ ++ K++H N+V L G LI + + L FD + G
Sbjct: 64 ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDAS 119
Query: 72 RILEGVAQGLLYLHHYSRLRVIHRDLKASNIL---LDSNMNPKISDFGIARLFGGDELQS 128
R++ V + YLH L ++HRDLK N+L LD + ISDFG++++ ++ S
Sbjct: 120 RLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGS 173
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLV 163
GT GY++PE + +S D +S GV+
Sbjct: 174 VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 208
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 73 ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLD---SNMNPKISDFGIARLFGGDELQSN 129
+L ++ L YLH R+IHRDLK NI+L + KI D G A+ EL +
Sbjct: 127 LLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE 183
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
VGT Y++PE + +++ D +SFG L E ++
Sbjct: 184 ---FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECIT 219
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 73 ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLD---SNMNPKISDFGIARLFGGDELQSN 129
+L ++ L YLH R+IHRDLK NI+L + KI D G A+ EL +
Sbjct: 126 LLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE 182
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
VGT Y++PE + +++ D +SFG L E ++
Sbjct: 183 ---FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECIT 218
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 80 GLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGTYGY 139
GL LH R R+++RDLK NILLD + + +ISD G+A E Q+ R VGT GY
Sbjct: 298 GLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGR-VGTVGY 351
Query: 140 MSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
M+PE ++ D ++ G L+ E ++ +
Sbjct: 352 MAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 15/163 (9%)
Query: 4 QSGQGLEE-FKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT-K 61
+ G+ ++E K E++ L+H N+VR + ++ EY L F+
Sbjct: 52 ERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL----FERICN 107
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP--KISDFGIAR 119
G + + + G+ Y H ++V HRDLK N LLD + P KI DFG ++
Sbjct: 108 AGRFSEDEARFFFQQLISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK 164
Query: 120 LFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIK-SDVFSFGV 161
L S K VGT Y++PE L+ + K +DV+S GV
Sbjct: 165 ---SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGV 204
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 80/146 (54%), Gaps = 13/146 (8%)
Query: 1 LSSQSGQGLEEFK-NEMMLIAKLQ-HRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFD 58
S++ Q L E E+ ++ K+ H N+++L + L+++ M K + F +
Sbjct: 58 FSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLM--KKGELFDYL 115
Query: 59 PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
K L E R +I+ + + + LH +L ++HRDLK NILLD +MN K++DFG +
Sbjct: 116 TEKVTLSEKETR-KIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFS 171
Query: 119 -RLFGGDELQSNTKRIVGTYGYMSPE 143
+L G++L+S + GT Y++PE
Sbjct: 172 CQLDPGEKLRS----VCGTPSYLAPE 193
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 81/162 (50%), Gaps = 21/162 (12%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCFLFDPTKTGLLGWEMRV-- 71
E+ L+ +LQHRN++ L I H ++ LI+EY N +P + MRV
Sbjct: 83 EVSLLKELQHRNIIEL-KSVIHHNHRLHLIFEYAENDLKKYMDKNPDVS------MRVIK 135
Query: 72 RILEGVAQGLLYLHHYSRLRVIHRDLKASNILL---DSNMNP--KISDFGIARLFGGDEL 126
L + G+ + H SR R +HRDLK N+LL D++ P KI DFG+AR F G +
Sbjct: 136 SFLYQLINGVNFCH--SR-RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF-GIPI 191
Query: 127 QSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETL 167
+ T I+ T Y PE L +S D++S + E L
Sbjct: 192 RQFTHEII-TLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 82/154 (53%), Gaps = 9/154 (5%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRIL 74
E+ L+ +L H N++ L L++++M L+ + D + L ++ +L
Sbjct: 62 EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLV-LTPSHIKAYML 119
Query: 75 EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIV 134
+ QGL YLH + ++HRDLK +N+LLD N K++DFG+A+ FG ++ ++V
Sbjct: 120 MTL-QGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN-RAYXHQVV 174
Query: 135 GTYGYMSPEYALRG-LFSIKSDVFSFGVLVLETL 167
T Y +PE ++ + D+++ G ++ E L
Sbjct: 175 -TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 11/174 (6%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCF-LFDP 59
+S G E+ K E + L+H ++V L G +++E+M L CF +
Sbjct: 62 FTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADL-CFEIVKR 120
Query: 60 TKTGLLGWE-MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP---KISDF 115
G + E + + + + L Y H + +IHRD+K +LL S N K+ F
Sbjct: 121 ADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGF 177
Query: 116 GIARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSS 169
G+A G L + + VGT +M+PE R + DV+ GV++ LS
Sbjct: 178 GVAIQLGESGLVAGGR--VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 84/180 (46%), Gaps = 21/180 (11%)
Query: 20 AKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCF--------LFDPTKTGLLGWEM- 69
AK +R LV + C+ H I L+ + P KSL+ F L D + ++ E+
Sbjct: 67 AKRAYRELVLM--KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELD 124
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN 129
R+ + Q L + H +IHRDLK SNI++ S+ KI DFG+AR G +
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM-- 182
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAWN 189
T +V Y Y +PE L + D++S G ++ E + K F TD + WN
Sbjct: 183 TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMI--KGGVLFPGTDHID----QWN 235
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 11/174 (6%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCF-LFDP 59
+S G E+ K E + L+H ++V L G +++E+M L CF +
Sbjct: 64 FTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADL-CFEIVKR 122
Query: 60 TKTGLLGWE-MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP---KISDF 115
G + E + + + + L Y H + +IHRD+K +LL S N K+ F
Sbjct: 123 ADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGF 179
Query: 116 GIARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSS 169
G+A G L + + VGT +M+PE R + DV+ GV++ LS
Sbjct: 180 GVAIQLGESGLVAGGR--VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
+ + ++ L + R+IHRD+K NILLD + + I+DF IA + E Q T + GT
Sbjct: 121 ICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR-ETQITT--MAGT 177
Query: 137 YGYMSPEY--ALRGL-FSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAW 188
YM+PE + +G +S D +S GV E L ++ H ++ S + H +
Sbjct: 178 KPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTF 232
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 70/155 (45%), Gaps = 12/155 (7%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E + E++ L+H N+VR + +I EY L + G +
Sbjct: 61 ENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERI---CNAGRFSEDE 117
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP--KISDFGIARLFGGDELQ 127
+ + G+ Y H +++ HRDLK N LLD + P KI DFG ++ L
Sbjct: 118 ARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLH 171
Query: 128 SNTKRIVGTYGYMSPEYALRGLFSIK-SDVFSFGV 161
S K VGT Y++PE LR + K +DV+S GV
Sbjct: 172 SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGV 206
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 9/160 (5%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRIL 74
E+ ++ + +H N++ + + + Y+ ++ L+ K+ L + L
Sbjct: 91 EIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFL 150
Query: 75 EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNT---K 131
+ +GL Y+H + V+HRDLK SN+L+++ + KI DFG+AR+ D +T
Sbjct: 151 YQILRGLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARI--ADPEHDHTGFLT 205
Query: 132 RIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
V T Y +PE L KS D++S G ++ E LS++
Sbjct: 206 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 20 AKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCF--------LFDPTKTGLLGWEM- 69
AK +R LV + C+ H I L+ + P KSL+ F L D ++ E+
Sbjct: 67 AKRAYRELVLM--KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD 124
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN 129
R+ + Q L + H +IHRDLK SNI++ S+ KI DFG+AR G +
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-- 182
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAWN 189
T +V Y Y +PE L + D++S G ++ E + K F TD + WN
Sbjct: 183 TPEVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMI--KGGVLFPGTDHID----QWN 235
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 84/184 (45%), Gaps = 30/184 (16%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCF--------LFDPTKTGLLG 66
E++L+ + H+N++ L + P KSL+ F L D + ++
Sbjct: 73 ELVLMKVVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQ 120
Query: 67 WEM-RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDE 125
E+ R+ + Q L+ + H +IHRDLK SNI++ S+ KI DFG+AR G
Sbjct: 121 MELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSF 180
Query: 126 LQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLG 185
+ T +V Y Y +PE L + D++S G ++ E + K F TD +
Sbjct: 181 MM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMI--KGGVLFPGTDHID--- 232
Query: 186 HAWN 189
WN
Sbjct: 233 -QWN 235
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 84/180 (46%), Gaps = 21/180 (11%)
Query: 20 AKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCF--------LFDPTKTGLLGWEM- 69
AK +R LV + C+ H I L+ + P KSL+ F L D + ++ E+
Sbjct: 67 AKRAYRELVLM--KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELD 124
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN 129
R+ + Q L + H +IHRDLK SNI++ S+ KI DFG+AR G +
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-- 182
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAWN 189
T +V Y Y +PE L + D++S G ++ E + K F TD + WN
Sbjct: 183 TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMI--KGGVLFPGTDHID----QWN 235
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 20/169 (11%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGC--CIEHGEK--ILIYEYMPNKSLDCFL--FDPTKTG 63
+ FK E + LQH N+VR + G+K +L+ E + +L +L F K
Sbjct: 70 QRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIK 129
Query: 64 LL-GWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP-KISDFGIARLF 121
+L W + +GL +LH + +IHRDLK NI + KI D G+A L
Sbjct: 130 VLRSW------CRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL- 181
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
+ S K ++GT + +PE + DV++FG LE +S+
Sbjct: 182 ---KRASFAKAVIGTPEFXAPE-XYEEKYDESVDVYAFGXCXLEXATSE 226
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 14/166 (8%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT 60
LS++ Q LE E + L+H N+VRL E G LI++ + L D
Sbjct: 49 LSARDHQKLE---REARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL---FEDIV 102
Query: 61 KTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP---KISDFGI 117
++ + + +L+ H ++ V+HR+LK N+LL S + K++DFG+
Sbjct: 103 AREYYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGL 159
Query: 118 ARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLV 163
A G+ Q GT GY+SPE + + D+++ GV++
Sbjct: 160 AIEVEGE--QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVIL 203
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 17/146 (11%)
Query: 27 LVRLFGCCIEHGEKILIYEYMPN--KSLDCFLFDPTKTGLLGWEMRVRILEGVAQGLLYL 84
+V+ FG I + + + E M + L + P +LG ++ + + L YL
Sbjct: 86 IVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILG-----KMTVAIVKALYYL 140
Query: 85 HHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGTYGYMSPEY 144
+ VIHRD+K SNILLD K+ DFGI+ D+ + R G YM+PE
Sbjct: 141 KE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKD---RSAGCAAYMAPER 195
Query: 145 -----ALRGLFSIKSDVFSFGVLVLE 165
+ + I++DV+S G+ ++E
Sbjct: 196 IDPPDPTKPDYDIRADVWSLGISLVE 221
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 79/146 (54%), Gaps = 13/146 (8%)
Query: 1 LSSQSGQGLEEFK-NEMMLIAKLQ-HRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFD 58
S++ Q L E E+ ++ K+ H N+++L + L+++ M K + F +
Sbjct: 58 FSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLM--KKGELFDYL 115
Query: 59 PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
K L E R +I+ + + + LH +L ++HRDLK NILLD +MN K++DFG +
Sbjct: 116 TEKVTLSEKETR-KIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFS 171
Query: 119 -RLFGGDELQSNTKRIVGTYGYMSPE 143
+L G++L + + GT Y++PE
Sbjct: 172 CQLDPGEKL----REVCGTPSYLAPE 193
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 76/180 (42%), Gaps = 35/180 (19%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKS--------LDCFLFDPT- 60
E+ + E+ +AKL H N+V GC ++Y P S C
Sbjct: 49 EKAEREVKALAKLDHVNIVHYNGCWDG-------FDYDPETSSKNSSRSKTKCLFIQMEF 101
Query: 61 --KTGLLGWEMRVR-----------ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSN 107
K L W + R + E + +G+ Y+H ++I+RDLK SNI L
Sbjct: 102 CDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDT 158
Query: 108 MNPKISDFGIARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETL 167
KI DFG+ D + +K GT YMSPE + + D+++ G+++ E L
Sbjct: 159 KQVKIGDFGLVTSLKNDGKRXRSK---GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 20 AKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCF--------LFDPTKTGLLGWEM- 69
AK +R LV + C+ H I L+ + P KSL+ F L D ++ E+
Sbjct: 67 AKRAYRELVLM--KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD 124
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN 129
R+ + Q L + H +IHRDLK SNI++ S+ KI DFG+AR G +
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-- 182
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAWN 189
T +V Y Y +PE L + D++S G ++ E + K F TD + WN
Sbjct: 183 TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMI--KGGVLFPGTDHID----QWN 235
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 20 AKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCF--------LFDPTKTGLLGWEM- 69
AK +R LV + C+ H I L+ + P KSL+ F L D ++ E+
Sbjct: 68 AKRAYRELVLM--KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD 125
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN 129
R+ + Q L + H +IHRDLK SNI++ S+ KI DFG+AR G +
Sbjct: 126 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-- 183
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAWN 189
T +V Y Y +PE L + D++S G ++ E + K F TD + WN
Sbjct: 184 TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMI--KGGVLFPGTDHID----QWN 236
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 79/146 (54%), Gaps = 13/146 (8%)
Query: 1 LSSQSGQGLEEFK-NEMMLIAKLQ-HRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFD 58
S++ Q L E E+ ++ K+ H N+++L + L+++ M K + F +
Sbjct: 45 FSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLM--KKGELFDYL 102
Query: 59 PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
K L E R +I+ + + + LH +L ++HRDLK NILLD +MN K++DFG +
Sbjct: 103 TEKVTLSEKETR-KIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFS 158
Query: 119 -RLFGGDELQSNTKRIVGTYGYMSPE 143
+L G++L + + GT Y++PE
Sbjct: 159 CQLDPGEKL----REVCGTPSYLAPE 180
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 20 AKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCF--------LFDPTKTGLLGWEM- 69
AK +R LV + C+ H I L+ + P KSL+ F L D ++ E+
Sbjct: 67 AKRAYRELVLM--KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD 124
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN 129
R+ + Q L + H +IHRDLK SNI++ S+ KI DFG+AR G +
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-- 182
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAWN 189
T +V Y Y +PE L + D++S G ++ E + K F TD + WN
Sbjct: 183 TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMI--KGGVLFPGTDHID----QWN 235
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 12/162 (7%)
Query: 5 SGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGL 64
S + ++ + E + KLQH N+VRL E L+++ + L D
Sbjct: 44 SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREF 100
Query: 65 LGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP---KISDFGIARLF 121
++ + + + Y H ++HR+LK N+LL S K++DFG+A
Sbjct: 101 YSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 157
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLV 163
E GT GY+SPE + +S D+++ GV++
Sbjct: 158 NDSEAWHG---FAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 196
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 15/161 (9%)
Query: 20 AKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCF--------LFDPTKTGLLGWEM- 69
AK +R LV + C+ H I L+ + P K+L+ F L D ++ E+
Sbjct: 60 AKRAYRELVLM--KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELD 117
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN 129
R+ + Q L + H +IHRDLK SNI++ S+ KI DFG+AR G +
Sbjct: 118 HERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMM-- 175
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
T +V Y Y +PE L + D++S G ++ E + K
Sbjct: 176 TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 12/162 (7%)
Query: 5 SGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGL 64
S + ++ + E + KLQH N+VRL E L+++ + L D
Sbjct: 45 SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREF 101
Query: 65 LGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP---KISDFGIARLF 121
++ + + + Y H ++HR+LK N+LL S K++DFG+A
Sbjct: 102 YSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 158
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLV 163
E GT GY+SPE + +S D+++ GV++
Sbjct: 159 NDSEAWHG---FAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 197
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 15/161 (9%)
Query: 20 AKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCF--------LFDPTKTGLLGWEM- 69
AK +R LV + C+ H I L+ + P K+L+ F L D ++ E+
Sbjct: 67 AKRAYRELVLM--KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELD 124
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN 129
R+ + Q L + H +IHRDLK SNI++ S+ KI DFG+AR G +
Sbjct: 125 HERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMM-- 182
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
T +V Y Y +PE L + D++S G ++ E + K
Sbjct: 183 TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 30/184 (16%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCF--------LFDPTKTGLLG 66
E++L+ + H+N++ L + P KSL+ F L D + ++
Sbjct: 73 ELVLMKVVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQ 120
Query: 67 WEM-RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDE 125
E+ R+ + Q L + H +IHRDLK SNI++ S+ KI DFG+AR G
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSF 180
Query: 126 LQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLG 185
+ T +V Y Y +PE L + D++S G ++ E + K F TD +
Sbjct: 181 MM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMI--KGGVLFPGTDHID--- 232
Query: 186 HAWN 189
WN
Sbjct: 233 -QWN 235
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 12 FKNEMMLIAKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCF--------LFDPTKT 62
F+N+ AK +R LV + C+ H I L+ + P K+L+ F L D
Sbjct: 99 FQNQTH--AKRAYRELVLMK--CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLC 154
Query: 63 GLLGWEM-RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
++ E+ R+ + Q L + H +IHRDLK SNI++ S+ KI DFG+AR
Sbjct: 155 QVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 214
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
G + T +V Y Y +PE L + D++S G ++ E + K
Sbjct: 215 GTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 24/165 (14%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCF--------LFDPTKTGLLG 66
E++L+ + H+N++ L + P K+L+ F L D ++
Sbjct: 73 ELVLMKXVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQ 120
Query: 67 WEM-RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDE 125
E+ R+ + Q L + H +IHRDLK SNI++ S+ KI DFG+AR G
Sbjct: 121 MELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF 180
Query: 126 LQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
+ T +V Y Y +PE L + D++S G ++ E + K
Sbjct: 181 MM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 108/243 (44%), Gaps = 29/243 (11%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKI--LIYEYMPNKSLDCFLFDPTKTGLLGWEMRVR 72
E+ L+ +L+H N++ L + H ++ L+++Y + F + V+
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKAN---KKPVQ 124
Query: 73 ILEGVAQGLLY-----LHHYSRLRVIHRDLKASNILL----DSNMNPKISDFGIARLFGG 123
+ G+ + LLY +H+ V+HRDLK +NIL+ KI+D G ARLF
Sbjct: 125 LPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 184
Query: 124 D-ELQSNTKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK----------K 171
+ ++ +V T+ Y +PE L K+ D+++ G + E L+S+ K
Sbjct: 185 PLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIK 244
Query: 172 NAHFYNTDSLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNR--YINVALLCVQENAA 229
++ Y+ D L + + D + WE + + ++ R Y N +L+ E
Sbjct: 245 TSNPYHHDQLDRIFNVMGFPAD-KDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHK 303
Query: 230 DRP 232
+P
Sbjct: 304 VKP 306
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 14/153 (9%)
Query: 13 KNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT-KTGLLGWEMRV 71
K E++ L+H N+VR + ++ EY L F+ G +
Sbjct: 63 KREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL----FERICNAGRFSEDEAR 118
Query: 72 RILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP--KISDFGIARLFGGDELQSN 129
+ + G+ Y H ++V HRDLK N LLD + P KI DFG ++ L S
Sbjct: 119 FFFQQLISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQ 172
Query: 130 TKRIVGTYGYMSPEYALRGLFSIK-SDVFSFGV 161
K VGT Y++PE L+ + K +DV+S GV
Sbjct: 173 PKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGV 205
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 12/162 (7%)
Query: 5 SGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGL 64
S + ++ + E + KLQH N+VRL E L+++ + L D
Sbjct: 68 SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREF 124
Query: 65 LGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP---KISDFGIARLF 121
++ + + + Y H ++HR+LK N+LL S K++DFG+A
Sbjct: 125 YSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLV 163
E GT GY+SPE + +S D+++ GV++
Sbjct: 182 NDSEAWHG---FAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 220
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 11/167 (6%)
Query: 2 SSQSGQGLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT 60
S +G+E + + E+ + + L+H N++R++ + L+ E+ P L L
Sbjct: 50 SQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL---Q 106
Query: 61 KTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARL 120
K G + +E +A L Y H +VIHRD+K N+L+ KI+DFG
Sbjct: 107 KHGRFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFG---- 159
Query: 121 FGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETL 167
+ + + GT Y+ PE K D++ GVL E L
Sbjct: 160 WSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFL 206
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 12/162 (7%)
Query: 5 SGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGL 64
S + ++ + E + KLQH N+VRL E L+++ + L D
Sbjct: 45 SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREF 101
Query: 65 LGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP---KISDFGIARLF 121
++ + + + Y H ++HR+LK N+LL S K++DFG+A
Sbjct: 102 YSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 158
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLV 163
E GT GY+SPE + +S D+++ GV++
Sbjct: 159 NDSEAWHG---FAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 197
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 11/167 (6%)
Query: 2 SSQSGQGLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT 60
S +G+E + + E+ + + L+H N++R++ + L+ E+ P L L
Sbjct: 51 SQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL---Q 107
Query: 61 KTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARL 120
K G + +E +A L Y H +VIHRD+K N+L+ KI+DFG
Sbjct: 108 KHGRFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFG---- 160
Query: 121 FGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETL 167
+ + + GT Y+ PE K D++ GVL E L
Sbjct: 161 WSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFL 207
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 24/165 (14%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCF--------LFDPTKTGLLG 66
E++L+ + H+N++ L + P K+L+ F L D ++
Sbjct: 73 ELVLMKXVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQ 120
Query: 67 WEM-RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDE 125
E+ R+ + Q L + H +IHRDLK SNI++ S+ KI DFG+AR G
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF 180
Query: 126 LQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
+ T +V Y Y +PE L + D++S G ++ E + K
Sbjct: 181 MM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 12 FKNEMMLIAKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCF--------LFDPTKT 62
F+N+ AK +R LV + C+ H I L+ + P K+L+ F L D
Sbjct: 61 FQNQTH--AKRAYRELVLM--KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLC 116
Query: 63 GLLGWEM-RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
++ E+ R+ + Q L + H +IHRDLK SNI++ S+ KI DFG+AR
Sbjct: 117 QVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
G + T +V Y Y +PE L + D++S G ++ E + K
Sbjct: 177 GTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 15/161 (9%)
Query: 20 AKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCF--------LFDPTKTGLLGWEM- 69
AK +R LV + C+ H I L+ + P K+L+ F L D ++ E+
Sbjct: 67 AKRAYRELVLM--KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD 124
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN 129
R+ + Q L + H +IHRDLK SNI++ S+ KI DFG+AR G +
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-- 182
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
T +V Y Y +PE L + D++S G ++ E + K
Sbjct: 183 TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 12 FKNEMMLIAKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCF--------LFDPTKT 62
F+N+ AK +R LV + C+ H I L+ + P K+L+ F L D
Sbjct: 55 FQNQTH--AKRAYRELVLM--KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLC 110
Query: 63 GLLGWEM-RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
++ E+ R+ + Q L + H +IHRDLK SNI++ S+ KI DFG+AR
Sbjct: 111 QVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 170
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
G + T +V Y Y +PE L + D++S G ++ E + K
Sbjct: 171 GTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 15/161 (9%)
Query: 20 AKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCF--------LFDPTKTGLLGWEM- 69
AK +R LV + C+ H I L+ + P K+L+ F L D ++ E+
Sbjct: 68 AKRAYRELVLM--KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD 125
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN 129
R+ + Q L + H +IHRDLK SNI++ S+ KI DFG+AR G +
Sbjct: 126 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-- 183
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
T +V Y Y +PE L + D++S G ++ E + K
Sbjct: 184 TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 11/167 (6%)
Query: 2 SSQSGQGLE-EFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT 60
S +G+E + + E+ + + L+H N++R++ + L+ E+ P L L
Sbjct: 50 SQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL---Q 106
Query: 61 KTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARL 120
K G + +E +A L Y H +VIHRD+K N+L+ KI+DFG
Sbjct: 107 KHGRFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFG---- 159
Query: 121 FGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETL 167
+ + + GT Y+ PE K D++ GVL E L
Sbjct: 160 WSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFL 206
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 12 FKNEMMLIAKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCF--------LFDPTKT 62
F+N+ AK +R LV + C+ H I L+ + P K+L+ F L D
Sbjct: 60 FQNQTH--AKRAYRELVLM--KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLC 115
Query: 63 GLLGWEM-RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
++ E+ R+ + Q L + H +IHRDLK SNI++ S+ KI DFG+AR
Sbjct: 116 QVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 175
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
G + T +V Y Y +PE L + D++S G ++ E + K
Sbjct: 176 GTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 24/165 (14%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCF--------LFDPTKTGLLG 66
E++L+ + H+N++ L + P K+L+ F L D ++
Sbjct: 73 ELVLMKXVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQ 120
Query: 67 WEM-RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDE 125
E+ R+ + Q L + H +IHRDLK SNI++ S+ KI DFG+AR G
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF 180
Query: 126 LQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
+ T +V Y Y +PE L + D++S G ++ E + K
Sbjct: 181 MM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 15/161 (9%)
Query: 20 AKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCF--------LFDPTKTGLLGWEM- 69
AK +R LV + C+ H I L+ + P K+L+ F L D ++ E+
Sbjct: 68 AKRAYRELVLM--KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD 125
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN 129
R+ + Q L + H +IHRDLK SNI++ S+ KI DFG+AR G +
Sbjct: 126 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-- 183
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
T +V Y Y +PE L + D++S G ++ E + K
Sbjct: 184 TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 12 FKNEMMLIAKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCF--------LFDPTKT 62
F+N+ AK +R LV + C+ H I L+ + P K+L+ F L D
Sbjct: 55 FQNQTH--AKRAYRELVLM--KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLC 110
Query: 63 GLLGWEM-RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
++ E+ R+ + Q L + H +IHRDLK SNI++ S+ KI DFG+AR
Sbjct: 111 QVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 170
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
G + T +V Y Y +PE L + D++S G ++ E + K
Sbjct: 171 GTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 12/163 (7%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
L++ E+ + L H N+V+LF L+ EY + +L +
Sbjct: 57 LQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEAR 116
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG-GDELQ 127
+ R + Q Y H ++HRDLKA N+LLD++ N KI+DFG + F G++L
Sbjct: 117 AKFRQIVSAVQ---YCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLD 170
Query: 128 SNTKRIVGTYGYMSPE-YALRGLFSIKSDVFSFGVLVLETLSS 169
+ G Y +PE + + + DV+S GV++ +S
Sbjct: 171 A----FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
NE ++ + LV+L ++ ++ EYMP + L + G E R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL---RRIGRFS-EPHARF 145
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
AQ +L + L +I+RDLK N+L+D K++DFG A+ ++ T +
Sbjct: 146 Y--AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXL 198
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
GT Y++PE L ++ D ++ GVL+ E
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 12 FKNEMMLIAKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCF--------LFDPTKT 62
F+N+ AK +R LV + C+ H I L+ + P K+L+ F L D
Sbjct: 99 FQNQTH--AKRAYRELVLM--KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLC 154
Query: 63 GLLGWEM-RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
++ E+ R+ + Q L + H +IHRDLK SNI++ S+ KI DFG+AR
Sbjct: 155 QVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 214
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
G + T +V Y Y +PE L + D++S G ++ E + K
Sbjct: 215 GTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
NE ++ + LV+L ++ ++ EYMP + L + G E R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL---RRIGRFS-EPHARF 145
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
AQ +L + L +I+RDLK N+L+D K++DFG A+ ++ T +
Sbjct: 146 Y--AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXL 198
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
GT Y++PE L ++ D ++ GVL+ E
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 68/149 (45%), Gaps = 14/149 (9%)
Query: 68 EMRVRILEG-VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL 126
E R R +A L YLH L +++RDLK NILLDS + ++DFG+ + E
Sbjct: 138 EPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCK--ENIEH 192
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETL------SSKKNAHFYNTDS 180
S T GT Y++PE + + D + G ++ E L S+ A Y+
Sbjct: 193 NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL 252
Query: 181 LTLLGHAWNLWNDGRAWELMDSILQNDAS 209
L N+ N R L++ +LQ D +
Sbjct: 253 NKPLQLKPNITNSAR--HLLEGLLQKDRT 279
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 15/161 (9%)
Query: 20 AKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCF--------LFDPTKTGLLGWEM- 69
AK +R LV + C+ H I L+ + P KSL+ F L D ++ E+
Sbjct: 61 AKRAYRELVLM--KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD 118
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN 129
R+ + Q L + H +IHRDLK SNI++ S+ KI DFG+AR G +
Sbjct: 119 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-- 176
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
T +V Y Y +PE L + D++S G ++ E + K
Sbjct: 177 TPYVVTRY-YRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 12 FKNEMMLIAKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCF--------LFDPTKT 62
F+N+ AK +R LV + C+ H I L+ + P K+L+ F L D
Sbjct: 54 FQNQTH--AKRAYRELVLM--KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLC 109
Query: 63 GLLGWEM-RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
++ E+ R+ + Q L + H +IHRDLK SNI++ S+ KI DFG+AR
Sbjct: 110 QVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 169
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
G + T +V Y Y +PE L + D++S G ++ E + K
Sbjct: 170 GTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 38/248 (15%)
Query: 9 LEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
L+ FK E+M + +H N+V G C+ +I ++L + D +L
Sbjct: 73 LKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKI--VLDVN 130
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
+I + + +G+ YLH ++H+DLK+ N+ D N I+DFG+ + G LQ+
Sbjct: 131 KTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLFSISG--VLQA 184
Query: 129 NTK----RIV-GTYGYMSPEYALRGL----------FSIKSDVFSFGVLVLETLSSKKNA 173
+ RI G +++PE +R L FS SDVF+ G + E + +
Sbjct: 185 GRREDKLRIQNGWLCHLAPEI-IRQLSPDTEEDKLPFSKHSDVFALGTIWYELHA--REW 241
Query: 174 HFYNTDSLTLLGHAWNLWNDGRAWELMDSILQNDASYPMLNRYINVALLCVQENAADRPT 233
F + ++ W++ + N + M ++ L C +RPT
Sbjct: 242 PFKTQPAEAII------------WQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPT 289
Query: 234 MLEVISML 241
+++ ML
Sbjct: 290 FTKLMDML 297
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 15/161 (9%)
Query: 20 AKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCF--------LFDPTKTGLLGWEM- 69
AK +R LV + C+ H I L+ + P KSL+ F L D ++ E+
Sbjct: 72 AKRAYRELVLM--KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD 129
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN 129
R+ + Q L + H +IHRDLK SNI++ S+ KI DFG+AR G +
Sbjct: 130 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-- 187
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
T +V Y Y +PE L + D++S G ++ E + K
Sbjct: 188 TPYVVTRY-YRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 15/161 (9%)
Query: 20 AKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCF--------LFDPTKTGLLGWEM- 69
AK +R LV + C+ H I L+ + P KSL+ F L D ++ E+
Sbjct: 67 AKRAYRELVLM--KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD 124
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN 129
R+ + Q L + H +IHRDLK SNI++ S+ KI DFG+AR G +
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEP 184
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
V T Y +PE L + D++S G ++ E + K
Sbjct: 185 E---VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 58/104 (55%), Gaps = 11/104 (10%)
Query: 41 ILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKAS 100
L+++ M L +L + K L E R I+ + + + +LH + ++HRDLK
Sbjct: 176 FLVFDLMRKGELFDYLTE--KVALSEKETRS-IMRSLLEAVSFLHANN---IVHRDLKPE 229
Query: 101 NILLDSNMNPKISDFGIA-RLFGGDELQSNTKRIVGTYGYMSPE 143
NILLD NM ++SDFG + L G++L + + GT GY++PE
Sbjct: 230 NILLDDNMQIRLSDFGFSCHLEPGEKL----RELCGTPGYLAPE 269
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 85/188 (45%), Gaps = 23/188 (12%)
Query: 12 FKNEMMLIAKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCF--------LFDPTKT 62
F+N+ AK +R LV + C+ H I L+ + P KSL+ F L D
Sbjct: 63 FQNQTH--AKRAYRELVLM--KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLC 118
Query: 63 GLLGWEM-RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
++ E+ R+ + Q L + H +IHRDLK SNI++ S+ KI DFG+AR
Sbjct: 119 QVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 178
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSL 181
G + V T Y +PE L + D++S G ++ E + K F TD +
Sbjct: 179 GTSFMMVP---FVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI--KGGVLFPGTDHI 233
Query: 182 TLLGHAWN 189
WN
Sbjct: 234 D----QWN 237
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 23/188 (12%)
Query: 12 FKNEMMLIAKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCF--------LFDPTKT 62
F+N+ AK +R LV L C+ H I L+ + P K+L+ F L D
Sbjct: 59 FQNQTH--AKRAYRELVLL--KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLC 114
Query: 63 GLLGWEM-RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
++ E+ R+ + Q L + H +IHRDLK SNI++ S+ KI DFG+AR
Sbjct: 115 QVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 174
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSL 181
+ + T +V Y Y +PE L + D++S G ++ E + K + F TD +
Sbjct: 175 STNFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGELV--KGSVIFQGTDHI 229
Query: 182 TLLGHAWN 189
WN
Sbjct: 230 D----QWN 233
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHG--EKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVR 72
E ++ KL H+N+V+LF E K+LI E+ P SL L +P+ L +
Sbjct: 57 EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI 116
Query: 73 ILEGVAQGLLYLHHYSRLRVIHRDLKASNILL----DSNMNPKISDFGIARLFGGDELQS 128
+L V G ++H ++HR++K NI+ D K++DFG AR DE
Sbjct: 117 VLRDVVGG---MNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE--- 170
Query: 129 NTKRIVGTYGYMSPEYALRGL--------FSIKSDVFSFGV 161
+ GT Y+ P+ R + + D++S GV
Sbjct: 171 QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGV 211
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 13/109 (11%)
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNT 130
+ I +A+ + +LH ++HRDLK SNI + K+ DFG+ DE +
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 131 ----------KRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSS 169
VGT YMSPE +S K D+FS G+++ E L S
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYS 272
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHG--EKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVR 72
E ++ KL H+N+V+LF E K+LI E+ P SL L +P+ L +
Sbjct: 57 EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI 116
Query: 73 ILEGVAQGLLYLHHYSRLRVIHRDLKASNILL----DSNMNPKISDFGIARLFGGDELQS 128
+L V G ++H ++HR++K NI+ D K++DFG AR DE
Sbjct: 117 VLRDVVGG---MNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE--- 170
Query: 129 NTKRIVGTYGYMSPEYALRGL--------FSIKSDVFSFGV 161
+ GT Y+ P+ R + + D++S GV
Sbjct: 171 QFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGV 211
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 15/163 (9%)
Query: 4 QSGQGLEE-FKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT-K 61
+ G+ ++E K E++ L+H N+VR + ++ EY L F+
Sbjct: 53 ERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL----FERICN 108
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP--KISDFGIAR 119
G + + + G+ Y H ++V HRDLK N LLD + P KI FG ++
Sbjct: 109 AGRFSEDEARFFFQQLISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSK 165
Query: 120 LFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIK-SDVFSFGV 161
L S K VGT Y++PE L+ + K +DV+S GV
Sbjct: 166 ---SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGV 205
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 15/163 (9%)
Query: 4 QSGQGLEE-FKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT-K 61
+ G+ ++E K E++ L+H N+VR + ++ EY L F+
Sbjct: 53 ERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL----FERICN 108
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP--KISDFGIAR 119
G + + + G+ Y H ++V HRDLK N LLD + P KI FG ++
Sbjct: 109 AGRFSEDEARFFFQQLISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSK 165
Query: 120 LFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIK-SDVFSFGV 161
L S K VGT Y++PE L+ + K +DV+S GV
Sbjct: 166 ---SSVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGV 205
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 15/161 (9%)
Query: 20 AKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCF--------LFDPTKTGLLGWEM- 69
AK +R LV + C+ H I L+ + P KSL+ F L D ++ E+
Sbjct: 67 AKRAYRELVLM--KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD 124
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN 129
R+ + Q L + H +IHRDLK SNI++ S+ KI DFG+AR G +
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEP 184
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK 170
V T Y +PE L + D++S G ++ E + K
Sbjct: 185 E---VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 15/172 (8%)
Query: 2 SSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTK 61
+S+ G EE + E+ ++ ++ H N++ L + +LI E + L FL +
Sbjct: 52 ASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQ 108
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNI-LLDSNM---NPKISDFGI 117
L E ++ + G+ YLH ++ H DLK NI LLD N+ + K+ DFG+
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 118 A-RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
A + G E K I GT +++PE +++D++S GV+ LS
Sbjct: 166 AHEIEDGVEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 15/172 (8%)
Query: 2 SSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTK 61
+S+ G EE + E+ ++ ++ H N++ L + +LI E + L FL +
Sbjct: 52 ASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQ 108
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNI-LLDSNM---NPKISDFGI 117
L E ++ + G+ YLH ++ H DLK NI LLD N+ + K+ DFG+
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 118 A-RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
A + G E K I GT +++PE +++D++S GV+ LS
Sbjct: 166 AHEIEDGVEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 23/188 (12%)
Query: 12 FKNEMMLIAKLQHRNLVRLFGCCIEHGEKI-LIYEYMPNKSLDCF--------LFDPTKT 62
F+N+ AK +R LV L C+ H I L+ + P K+L+ F L D
Sbjct: 61 FQNQTH--AKRAYRELVLL--KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLC 116
Query: 63 GLLGWEM-RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
++ E+ R+ + Q L + H +IHRDLK SNI++ S+ KI DFG+AR
Sbjct: 117 QVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSL 181
+ + T +V Y Y +PE L ++ D++S G ++ E + K F TD +
Sbjct: 177 CTNFMM--TPYVVTRY-YRAPEVILGMGYAANVDIWSVGCIMGELV--KGCVIFQGTDHI 231
Query: 182 TLLGHAWN 189
WN
Sbjct: 232 D----QWN 235
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 15/172 (8%)
Query: 2 SSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTK 61
+S+ G EE + E+ ++ ++ H N++ L + +LI E + L FL +
Sbjct: 52 ASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQ 108
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNI-LLDSNM---NPKISDFGI 117
L E ++ + G+ YLH ++ H DLK NI LLD N+ + K+ DFG+
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 118 A-RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
A + G E K I GT +++PE +++D++S GV+ LS
Sbjct: 166 AHEIEDGVEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 12/160 (7%)
Query: 24 HRNLVRLFGCCIEHGEKIL-IYEYMPNKSLDCFLFDPTKTGLLGWEMRVRILEG-VAQGL 81
H L +LF CC + +++ + E++ L +F K+ E R R + L
Sbjct: 83 HPFLTQLF-CCFQTPDRLFFVMEFVNGGDL---MFHIQKSRRFD-EARARFYAAEIISAL 137
Query: 82 LYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGTYGYMS 141
++LH +I+RDLK N+LLD + K++DFG+ + G T GT Y++
Sbjct: 138 MFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTPDYIA 192
Query: 142 PEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSL 181
PE L+ D ++ GVL+ E L N D L
Sbjct: 193 PEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDL 232
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 15/172 (8%)
Query: 2 SSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTK 61
+S+ G EE + E+ ++ ++ H N++ L + +LI E + L FL +
Sbjct: 52 ASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQ 108
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNI-LLDSNM---NPKISDFGI 117
L E ++ + G+ YLH ++ H DLK NI LLD N+ + K+ DFG+
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 118 A-RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
A + G E K I GT +++PE +++D++S GV+ LS
Sbjct: 166 AHEIEDGVEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 13 KNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR-- 70
KNE+ ++ +L H L+ L + E +LI E++ LFD + ++M
Sbjct: 96 KNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGE----LFD--RIAAEDYKMSEA 149
Query: 71 --VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNM--NPKISDFGIARLFGGDEL 126
+ + +GL ++H +S ++H D+K NI+ ++ + KI DFG+A DE+
Sbjct: 150 EVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI 206
Query: 127 QSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVL 162
K T + +PE R +D+++ GVL
Sbjct: 207 ---VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVL 239
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 17/173 (9%)
Query: 2 SSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTK 61
+S+ G EE + E+ ++ ++ H N++ L + +LI E + L FL +
Sbjct: 52 ASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQ 108
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNI-LLDSNM---NPKISDFGI 117
L E ++ + G+ YLH ++ H DLK NI LLD N+ + K+ DFG+
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 118 ARLFGGDELQSNT--KRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
A E++ K I GT +++PE +++D++S GV+ LS
Sbjct: 166 AH-----EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 6 GQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLL 65
G L K E+ + L+H+++ +L+ + ++ EY P L F + ++ L
Sbjct: 49 GSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGEL--FDYIISQDRLS 106
Query: 66 GWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDE 125
E RV + + + Y+H HRDLK N+L D K+ DFG+ G++
Sbjct: 107 EEETRV-VFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK 162
Query: 126 LQSNTKRIVGTYGYMSPEYAL-RGLFSIKSDVFSFGVLV 163
+ + G+ Y +PE + ++DV+S G+L+
Sbjct: 163 -DYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILL 200
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 41/185 (22%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEH----------GEKILIY---EYMPNKSLDCFLFDPT 60
+E+ML+A L H+ +VR + +E +K ++ EY N++L +D
Sbjct: 51 SEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTL----YDLI 106
Query: 61 KTGLLGWEMRV--RILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
+ L + R+ + + L Y+H +IHRDLK NI +D + N KI DFG+A
Sbjct: 107 HSENLNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLA 163
Query: 119 R---------------LFGGDELQSNTKRIVGTYGYMSPEY-ALRGLFSIKSDVFSFGVL 162
+ L G + N +GT Y++ E G ++ K D++S G++
Sbjct: 164 KNVHRSLDILKLDSQNLPGSSD---NLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGII 220
Query: 163 VLETL 167
E +
Sbjct: 221 FFEMI 225
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 14/166 (8%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT 60
LS++ Q LE E + L+H N+VRL E G L+++ + L D
Sbjct: 69 LSARDHQKLE---REARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIV 122
Query: 61 KTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP---KISDFGI 117
+ + + + ++H + ++HRDLK N+LL S K++DFG+
Sbjct: 123 AREYYSEADASHCIHQILESVNHIHQHD---IVHRDLKPENLLLASKCKGAAVKLADFGL 179
Query: 118 ARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLV 163
A G+ Q GT GY+SPE + + D+++ GV++
Sbjct: 180 AIEVQGE--QQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVIL 223
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 80/185 (43%), Gaps = 41/185 (22%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLG------- 66
+E+ML+A L H+ +VR + +E + + KS + + G L
Sbjct: 51 SEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN 110
Query: 67 --------WEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
W + +ILE ++ Y+H +IHRDLK NI +D + N KI DFG+A
Sbjct: 111 LNQQRDEYWRLFRQILEALS----YIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLA 163
Query: 119 R---------------LFGGDELQSNTKRIVGTYGYMSPEY-ALRGLFSIKSDVFSFGVL 162
+ L G + N +GT Y++ E G ++ K D++S G++
Sbjct: 164 KNVHRSLDILKLDSQNLPGSSD---NLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGII 220
Query: 163 VLETL 167
E +
Sbjct: 221 FFEMI 225
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 67/139 (48%), Gaps = 21/139 (15%)
Query: 42 LIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRILEGVAQGLLYLHH-----YSRLRVIHRD 96
LI +Y N SL +D K+ L + +++ GL +LH + + HRD
Sbjct: 112 LITDYHENGSL----YDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRD 167
Query: 97 LKASNILLDSNMNPKISDFGIARLFGGD----ELQSNTKRIVGTYGYMSPEYALRGLFS- 151
LK+ NIL+ N I+D G+A F D ++ NT+ VGT YM PE L
Sbjct: 168 LKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTR--VGTKRYMPPEVLDESLNRN 225
Query: 152 -----IKSDVFSFGVLVLE 165
I +D++SFG+++ E
Sbjct: 226 HFQSYIMADMYSFGLILWE 244
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 8/157 (5%)
Query: 13 KNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVR 72
K E ++ +++H +V L G+ LI EY+ L + G+ +
Sbjct: 69 KAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACF 125
Query: 73 ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKR 132
L ++ L +LH +I+RDLK NI+L+ + K++DFG+ + D ++T
Sbjct: 126 YLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT-- 180
Query: 133 IVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSS 169
GT YM+PE +R + D +S G L+ + L+
Sbjct: 181 FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
NE ++ + LV+L ++ ++ EY+P + L + G E R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFS-EPHARF 145
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
AQ +L + L +I+RDLK N+L+D K++DFG A+ ++ T +
Sbjct: 146 Y--AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXL 198
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
GT Y++PE L ++ D ++ GVL+ E
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
AQ +L + L +I+RDLK N+L+D K++DFG A+ ++ T + GT
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGT 202
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
Y++PE L ++ D ++ GVL+ E
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
+ L YLH S V++RDLK N++LD + + KI+DFG+ + G + + K GT
Sbjct: 260 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGT 315
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLL 184
Y++PE + D + GV++ E + + FYN D L
Sbjct: 316 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHEKLF 361
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
AQ +L + L +I+RDLK N+++D K++DFG+A+ ++ T + GT
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAK-----RVKGRTWXLCGT 201
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
Y++PE L ++ D ++ GVL+ E
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
+ L YLH S V++RDLK N++LD + + KI+DFG+ + G + + K GT
Sbjct: 257 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGT 312
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLL 184
Y++PE + D + GV++ E + + FYN D L
Sbjct: 313 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHEKLF 358
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 8/157 (5%)
Query: 13 KNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVR 72
K E ++ +++H +V L G+ LI EY+ L + G+ +
Sbjct: 69 KAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACF 125
Query: 73 ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKR 132
L ++ L +LH +I+RDLK NI+L+ + K++DFG+ + D + T
Sbjct: 126 YLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD--GTVTHX 180
Query: 133 IVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSS 169
GT YM+PE +R + D +S G L+ + L+
Sbjct: 181 FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 12/129 (9%)
Query: 38 GEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDL 97
E ILI EY + P ++ +R+++ + +G+ YLH + ++H DL
Sbjct: 102 SEIILILEYAAGGEIFSLCL-PELAEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDL 157
Query: 98 KASNILLDSNMNP----KISDFGIARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIK 153
K NILL S++ P KI DFG++R G + I+GT Y++PE +
Sbjct: 158 KPQNILL-SSIYPLGDIKIVDFGMSRKIGH---ACELREIMGTPEYLAPEILNYDPITTA 213
Query: 154 SDVFSFGVL 162
+D+++ G++
Sbjct: 214 TDMWNIGII 222
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 15/172 (8%)
Query: 2 SSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTK 61
+S+ G EE + E+ ++ ++ H N++ L + +LI E + L FL +
Sbjct: 52 ASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL---AQ 108
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNI-LLDSNM---NPKISDFGI 117
L E ++ + G+ YLH ++ H DLK NI LLD N+ + K+ DFG+
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 118 A-RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
A + G E K I GT +++PE +++D++S GV+ LS
Sbjct: 166 AHEIEDGVEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E+F E + + + H ++V+L G E+ I I E L FL + ++
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRKFSLDL 110
Query: 70 RVRILEG--VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQ 127
IL ++ L YL R +HRD+ A N+L+ SN K+ DFG++R + D
Sbjct: 111 ASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTX 166
Query: 128 SNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETL 167
+ +M+PE F+ SDV+ FGV + E L
Sbjct: 167 XKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 92 VIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL--------QSNTKRIVGTYGYMSPE 143
VIHRDLK SN+L++SN + K+ DFG+AR+ QS V T Y +PE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPE 192
Query: 144 YAL-RGLFSIKSDVFSFGVLVLE 165
L +S DV+S G ++ E
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAE 215
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
AQ +L + L +I+RDLK N+++D K++DFG A+ ++ T + GT
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGT 202
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
Y++PE L ++ D ++ GVL+ E
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
AQ +L + L +I+RDLK N+++D K++DFG A+ ++ T + GT
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGT 202
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
Y++PE L ++ D ++ GVL+ E
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
AQ +L + L +I+RDLK N+++D K++DFG A+ ++ T + GT
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGT 202
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
Y++PE L ++ D ++ GVL+ E
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
AQ +L + L +I+RDLK N+++D K++DFG A+ ++ T + GT
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGT 201
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
Y++PE L ++ D ++ GVL+ E
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
AQ +L + L +I+RDLK N+++D K++DFG A+ ++ T + GT
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGT 202
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
Y++PE L ++ D ++ GVL+ E
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
AQ +L + L +I+RDLK N+++D K++DFG A+ ++ T + GT
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGT 201
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
Y++PE L ++ D ++ GVL+ E
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 92 VIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL--------QSNTKRIVGTYGYMSPE 143
VIHRDLK SN+L++SN + K+ DFG+AR+ QS V T Y +PE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPE 192
Query: 144 YAL-RGLFSIKSDVFSFGVLVLE 165
L +S DV+S G ++ E
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAE 215
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
NE ++ + LV+L ++ ++ EY+P + L + G E R
Sbjct: 83 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFS-EPHARF 138
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
AQ +L + L +I+RDLK N+L+D +++DFG A+ ++ T +
Sbjct: 139 Y--AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 191
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
GT Y++PE L ++ D ++ GVL+ E
Sbjct: 192 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 223
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
+ L YLH S V++RDLK N++LD + + KI+DFG+ + G + + K GT
Sbjct: 118 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGT 173
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLL 184
Y++PE + D + GV++ E + + FYN D L
Sbjct: 174 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHEKLF 219
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
+ L YLH S V++RDLK N++LD + + KI+DFG+ + G + + K GT
Sbjct: 119 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGT 174
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLL 184
Y++PE + D + GV++ E + + FYN D L
Sbjct: 175 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHEKLF 220
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
NE ++ + LV+L ++ ++ EY+P + L + G E R
Sbjct: 90 NEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFS-EPHARF 145
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
AQ +L + L +I+RDLK N+L+D +++DFG A+ ++ T +
Sbjct: 146 Y--AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 198
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
GT Y++PE L ++ D ++ GVL+ E
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
+ L YLH S V++RDLK N++LD + + KI+DFG+ + G + + K GT
Sbjct: 117 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGT 172
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLL 184
Y++PE + D + GV++ E + + FYN D L
Sbjct: 173 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHEKLF 218
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
NE ++ + LV+L ++ ++ EY+P + L + G E R
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFS-EPHARF 146
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
AQ +L + L +I+RDLK N+L+D +++DFG A+ ++ T +
Sbjct: 147 Y--AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 199
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
GT Y++PE L ++ D ++ GVL+ E
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
AQ +L + L +I+RDLK N+L+D +++DFG A+ ++ T + GT
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLAGT 201
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
Y++PE L ++ D ++ GVL+ E
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
NE ++ + LV+L ++ ++ EY+P + L + G E R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFS-EPHARF 145
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
AQ +L + L +I+RDLK N+L+D +++DFG A+ ++ T +
Sbjct: 146 Y--AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 198
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
GT Y++PE L ++ D ++ GVL+ E
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
NE ++ + LV+L ++ ++ EY+P + L + G E R
Sbjct: 90 NEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFS-EPHARF 145
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
AQ +L + L +I+RDLK N+L+D +++DFG A+ ++ T +
Sbjct: 146 Y--AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 198
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
GT Y++PE L ++ D ++ GVL+ E
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
NE ++ + LV+L ++ ++ EY+P + L + G E R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFS-EPHARF 145
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
AQ +L + L +I+RDLK N+L+D +++DFG A+ ++ T +
Sbjct: 146 Y--AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 198
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
GT Y++PE L ++ D ++ GVL+ E
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
NE ++ + LV+L ++ ++ EY+P + L + G E R
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFS-EPHARF 146
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
AQ +L + L +I+RDLK N+L+D +++DFG A+ ++ T +
Sbjct: 147 Y--AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTL 199
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
GT Y++PE L ++ D ++ GVL+ E
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
NE ++ + LV+L ++ ++ EY+P + L + G E R
Sbjct: 90 NEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFS-EPHARF 145
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
AQ +L + L +I+RDLK N+L+D +++DFG A+ ++ T +
Sbjct: 146 Y--AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 198
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
GT Y++PE L ++ D ++ GVL+ E
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
NE ++ + LV+L ++ ++ EY+P + L + G E R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFS-EPHARF 145
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
AQ +L + L +I+RDLK N+L+D +++DFG A+ ++ T +
Sbjct: 146 Y--AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 198
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
GT Y++PE L ++ D ++ GVL+ E
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
NE ++ + LV+L ++ ++ EY+P + L + G E R
Sbjct: 76 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFS-EPHARF 131
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
AQ +L + L +I+RDLK N+L+D +++DFG A+ ++ T +
Sbjct: 132 Y--AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTL 184
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
GT Y++PE L ++ D ++ GVL+ E
Sbjct: 185 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 216
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 92 VIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL--------QSNTKRIVGTYGYMSPE 143
VIHRDLK SN+L++SN + K+ DFG+AR+ QS V T Y +PE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPE 192
Query: 144 YAL-RGLFSIKSDVFSFGVLVLE 165
L +S DV+S G ++ E
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAE 215
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
NE ++ + LV+L ++ ++ EY+P + L + G E R
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFS-EPHARF 146
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
AQ +L + L +I+RDLK N+L+D +++DFG A+ ++ T +
Sbjct: 147 Y--AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 199
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
GT Y++PE L ++ D ++ GVL+ E
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
NE ++ + LV+L ++ ++ EY+P + L + G E R
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFS-EPHARF 146
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
AQ +L + L +I+RDLK N+L+D +++DFG A+ ++ T +
Sbjct: 147 Y--AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 199
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
GT Y++PE L ++ D ++ GVL+ E
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
NE ++ + LV+L ++ ++ EY+P + L + G E R
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFS-EPHARF 146
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
AQ +L + L +I+RDLK N+L+D +++DFG A+ ++ T +
Sbjct: 147 Y--AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 199
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
GT Y++PE L ++ D ++ GVL+ E
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 79 QGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF--GGDELQSNTKRIVGT 136
+GL Y+H +VIHRDLK SN+L++ N KI DFG+AR E Q V T
Sbjct: 170 RGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 226
Query: 137 YGYMSPEYALR-GLFSIKSDVFSFGVLVLETLSSKK 171
Y +PE L ++ D++S G + E L+ ++
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
NE ++ + LV+L ++ ++ EY+P + L + G E R
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFS-EPHARF 166
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
AQ +L + L +I+RDLK N+L+D +++DFG A+ ++ T +
Sbjct: 167 Y--AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 219
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
GT Y++PE L ++ D ++ GVL+ E
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 251
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 21/165 (12%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E+F E + + + H ++V+L G E+ I I E L FL ++
Sbjct: 84 EKFLQEALTMRQFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL-----------QV 131
Query: 70 RVRILEGVAQGLLYLHHYSRL-------RVIHRDLKASNILLDSNMNPKISDFGIARLFG 122
R L+ +A +LY + S R +HRD+ A N+L+ SN K+ DFG++R
Sbjct: 132 RKYSLD-LASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 190
Query: 123 GDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETL 167
+K + +M+PE F+ SDV+ FGV + E L
Sbjct: 191 DSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 9 LEEFK-NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGW 67
LE F+ E+M A L +V L+G E + E + SL + + G L
Sbjct: 109 LEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV---KEQGCLPE 165
Query: 68 EMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSN-MNPKISDFGIARLFGGDEL 126
+ + L +GL YLH SR R++H D+KA N+LL S+ + + DFG A D L
Sbjct: 166 DRALYYLGQALEGLEYLH--SR-RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGL 222
Query: 127 QSN---TKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSS 169
+ I GT +M+PE L K DV+S ++L L+
Sbjct: 223 GKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 17/155 (10%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
+ +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR DE+ V T
Sbjct: 163 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVAT 214
Query: 137 YGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAWNLWNDGR 195
Y +PE L + +++ D++S G ++ E L+ + F TD + L L
Sbjct: 215 RWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR--TLFPGTDHINQLQQIMRLTGTPP 272
Query: 196 AWELMDSILQNDASYPMLNRYINVALLCVQENAAD 230
A S++ S+ N YIN + N AD
Sbjct: 273 A-----SVISRMPSHEARN-YINSLPQMPKRNFAD 301
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 28/173 (16%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT 60
LS++ Q LE E + L+H N+VRL E G + Y+ +FD
Sbjct: 42 LSARDHQKLE---REARICRLLKHPNIVRLHDSISEEG-----FHYL--------VFDLV 85
Query: 61 KTGLLGWEMRVR-------ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP--- 110
G L ++ R + Q L ++H ++HRDLK N+LL S
Sbjct: 86 TGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAV 145
Query: 111 KISDFGIARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLV 163
K++DFG+A GD Q GT GY+SPE + + D+++ GV++
Sbjct: 146 KLADFGLAIEVQGD--QQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVIL 196
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
AQ +L + L +I+RDLK N+L+D +++DFG A+ ++ T + GT
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
Y++PE L ++ D ++ GVL+ E
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
NE ++ + LV+L ++ ++ EY+P + L + G E R
Sbjct: 83 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFX-EPHARF 138
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
AQ +L + L +I+RDLK N+L+D +++DFG A+ ++ T +
Sbjct: 139 Y--AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 191
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
GT Y++PE L ++ D ++ GVL+ E
Sbjct: 192 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 223
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 21/165 (12%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E+F E + + + H ++V+L G E+ I I E L FL ++
Sbjct: 61 EKFLQEALTMRQFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL-----------QV 108
Query: 70 RVRILEGVAQGLLYLHHYSRL-------RVIHRDLKASNILLDSNMNPKISDFGIARLFG 122
R L+ +A +LY + S R +HRD+ A N+L+ SN K+ DFG++R
Sbjct: 109 RKYSLD-LASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 167
Query: 123 GDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETL 167
+K + +M+PE F+ SDV+ FGV + E L
Sbjct: 168 DSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 21/165 (12%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E+F E + + + H ++V+L G E+ I I E L FL ++
Sbjct: 53 EKFLQEALTMRQFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL-----------QV 100
Query: 70 RVRILEGVAQGLLYLHHYSRL-------RVIHRDLKASNILLDSNMNPKISDFGIARLFG 122
R L+ +A +LY + S R +HRD+ A N+L+ SN K+ DFG++R
Sbjct: 101 RKYSLD-LASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 159
Query: 123 GDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETL 167
+K + +M+PE F+ SDV+ FGV + E L
Sbjct: 160 DSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
AQ +L + L +I+RDLK N+L+D +++DFG A+ ++ T + GT
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLXGT 201
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
Y++PE L ++ D ++ GVL+ E
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 10/155 (6%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E + E+ ++ L+H LV L + E ++IYE+M L + D + + +
Sbjct: 199 ETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVAD--EHNKMSEDE 256
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP--KISDFGIARLFGGDELQ 127
V + V +GL ++H + +H DLK NI+ + + K+ DFG+ D Q
Sbjct: 257 AVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHL--DPKQ 311
Query: 128 SNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVL 162
S K GT + +PE A +D++S GVL
Sbjct: 312 S-VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVL 345
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
NE ++ + LV+L ++ ++ EY+P + L + G E R
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFX-EPHARF 146
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
AQ +L + L +I+RDLK N+L+D +++DFG A+ ++ T +
Sbjct: 147 Y--AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 199
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
GT Y++PE L ++ D ++ GVL+ E
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 75/166 (45%), Gaps = 14/166 (8%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT 60
LS++ Q LE E + L+H N+VRL E G L+++ + L F+
Sbjct: 42 LSARDHQKLE---REARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDI 94
Query: 61 KTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP---KISDFGI 117
E + Q L ++H ++HRDLK N+LL S K++DFG+
Sbjct: 95 VAREYYSEADAS--HCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGL 152
Query: 118 ARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLV 163
A GD Q GT GY+SPE + + D+++ GV++
Sbjct: 153 AIEVQGD--QQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVIL 196
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 21/165 (12%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E+F E + + + H ++V+L G E+ I I E L FL ++
Sbjct: 58 EKFLQEALTMRQFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL-----------QV 105
Query: 70 RVRILEGVAQGLLYLHHYSRL-------RVIHRDLKASNILLDSNMNPKISDFGIARLFG 122
R L+ +A +LY + S R +HRD+ A N+L+ SN K+ DFG++R
Sbjct: 106 RKYSLD-LASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 164
Query: 123 GDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETL 167
+K + +M+PE F+ SDV+ FGV + E L
Sbjct: 165 DSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 21/165 (12%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E+F E + + + H ++V+L G E+ I I E L FL ++
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL-----------QV 103
Query: 70 RVRILEGVAQGLLYLHHYSRL-------RVIHRDLKASNILLDSNMNPKISDFGIARLFG 122
R L+ +A +LY + S R +HRD+ A N+L+ SN K+ DFG++R
Sbjct: 104 RKYSLD-LASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 162
Query: 123 GDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETL 167
+K + +M+PE F+ SDV+ FGV + E L
Sbjct: 163 DSTYYKASKGKLPI-KWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
NE ++ + LV+L ++ ++ EY+P + L + G E R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFX-EPHARF 145
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
AQ +L + L +I+RDLK N+L+D +++DFG A+ ++ T +
Sbjct: 146 Y--AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 198
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
GT Y++PE L ++ D ++ GVL+ E
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 21/165 (12%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E+F E + + + H ++V+L G E+ I I E L FL ++
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL-----------QV 103
Query: 70 RVRILEGVAQGLLYLHHYSRL-------RVIHRDLKASNILLDSNMNPKISDFGIARLFG 122
R L+ +A +LY + S R +HRD+ A N+L+ SN K+ DFG++R
Sbjct: 104 RKYSLD-LASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 162
Query: 123 GDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETL 167
+K + +M+PE F+ SDV+ FGV + E L
Sbjct: 163 DSTYYKASKGKLPI-KWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRI 73
NE ++ + LV+L ++ ++ EY+P + L + G E R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFX-EPHARF 145
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRI 133
AQ +L + L +I+RDLK N+L+D +++DFG A+ ++ T +
Sbjct: 146 Y--AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 198
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
GT Y++PE L ++ D ++ GVL+ E
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 79 QGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF--GGDELQSNTKRIVGT 136
+GL Y+H +VIHRDLK SN+L++ N KI DFG+AR E Q V T
Sbjct: 169 RGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 225
Query: 137 YGYMSPEYALR-GLFSIKSDVFSFGVLVLETLSSKK 171
Y +PE L ++ D++S G + E L+ ++
Sbjct: 226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
AQ +L + L +I+RDLK N+L+D +++DFG A+ ++ T + GT
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
Y++PE L ++ D ++ GVL+ E
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
AQ +L + L +I+RDLK N+L+D +++DFG A+ ++ T + GT
Sbjct: 142 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 196
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
Y++PE L ++ D ++ GVL+ E
Sbjct: 197 PEYLAPEIILSKGYNKAVDWWALGVLIYE 225
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
AQ +L + L +I+RDLK N+L+D +++DFG A+ ++ T + GT
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
Y++PE L ++ D ++ GVL+ E
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 21/165 (12%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E+F E + + + H ++V+L G E+ I I E L FL ++
Sbjct: 59 EKFLQEALTMRQFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL-----------QV 106
Query: 70 RVRILEGVAQGLLYLHHYSRL-------RVIHRDLKASNILLDSNMNPKISDFGIARLFG 122
R L+ +A +LY + S R +HRD+ A N+L+ SN K+ DFG++R
Sbjct: 107 RKYSLD-LASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 165
Query: 123 GDELQSNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETL 167
+K + +M+PE F+ SDV+ FGV + E L
Sbjct: 166 DSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
AQ +L + L +I+RDLK N+L+D +++DFG A+ ++ T + GT
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
Y++PE L ++ D ++ GVL+ E
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
AQ +L + L +I+RDLK N+L+D +++DFG A+ ++ T + GT
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 202
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
Y++PE L ++ D ++ GVL+ E
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
AQ +L + L +I+RDLK N+L+D +++DFG A+ ++ T + GT
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
Y++PE L ++ D ++ GVL+ E
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
AQ +L + L +I+RDLK N+L+D +++DFG A+ ++ T + GT
Sbjct: 168 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 222
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
Y++PE L ++ D ++ GVL+ E
Sbjct: 223 PEYLAPEIILSKGYNKAVDWWALGVLIYE 251
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
AQ +L + L +I+RDLK N+L+D +++DFG A+ ++ T + GT
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
Y++PE L ++ D ++ GVL+ E
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
AQ +L + L +I+RDLK N+L+D +++DFG A+ ++ T + GT
Sbjct: 134 AAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAK-----RVKGRTWXLCGT 188
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
Y++PE L ++ D ++ GVL+ E
Sbjct: 189 PEYLAPEIILSKGYNKAVDWWALGVLIYE 217
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
AQ +L + L +I+RDLK N+L+D +++DFG A+ ++ T + GT
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
Y++PE L ++ D ++ GVL+ E
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
AQ +L + L +I+RDLK N+L+D +++DFG A+ ++ T + GT
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
Y++PE L ++ D ++ GVL+ E
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
AQ +L + L +I+RDLK N+L+D +++DFG A+ ++ T + GT
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
Y++PE L ++ D ++ GVL+ E
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
AQ +L + L +I+RDLK N+L+D +++DFG A+ ++ T + GT
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
Y++PE L ++ D ++ GVL+ E
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 83/177 (46%), Gaps = 20/177 (11%)
Query: 14 NEMMLIAKLQHRNLVRLF-----GCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
E+ L+ L+H N++ L IE ++ Y+ + L + K+ L E
Sbjct: 76 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEV----YLVTTLMGADLNNIVKSQALSDE 131
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
++ + +GL Y+H +IHRDLK SN+ ++ + +I DFG+AR DE +
Sbjct: 132 HVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLAR--QADEEMT 186
Query: 129 NTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLL 184
V T Y +PE L + ++ D++S G ++ E L K A F +D + L
Sbjct: 187 G---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK--ALFPGSDYIDQL 238
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 174
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 175 TDDEMTG----YVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 76/164 (46%), Gaps = 11/164 (6%)
Query: 9 LEEFK-NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGW 67
LE F+ E+M A L +V L+G E + E + SL + + G L
Sbjct: 128 LEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV---KEQGCLPE 184
Query: 68 EMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSN-MNPKISDFGIARLFGGDEL 126
+ + L +GL YLH SR R++H D+KA N+LL S+ + + DFG A D L
Sbjct: 185 DRALYYLGQALEGLEYLH--SR-RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGL 241
Query: 127 QSN---TKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETL 167
+ I GT +M+PE L K DV+S ++L L
Sbjct: 242 GKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHML 285
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 14/150 (9%)
Query: 24 HRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRILEGVAQGLLY 83
H LV L C + EY+ L +F + L E ++ L Y
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALNY 136
Query: 84 LHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIAR--LFGGDELQSNTKRIVGTYGYMS 141
LH +I+RDLK N+LLDS + K++D+G+ + L GD T GT Y++
Sbjct: 137 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD----TTSXFCGTPNYIA 189
Query: 142 PEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
PE LRG + D ++ GVL+ E ++ +
Sbjct: 190 PE-ILRGEDYGFSVDWWALGVLMFEMMAGR 218
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 23/177 (12%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRN--LVRLFGCCIEHGEKILIYEYMPNKSLDCFLFD 58
L Q L+ ++NE+ + KLQ + ++RL+ I IY M ++D +
Sbjct: 62 LEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWL 118
Query: 59 PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
K + WE R + + + + +H + ++H DLK +N L+ M K+ DFGIA
Sbjct: 119 KKKKSIDPWE-RKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIA 173
Query: 119 RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKS------------DVFSFGVLV 163
D VGT YM PE A++ + S + DV+S G ++
Sbjct: 174 NQMQPDTTSVVKDSQVGTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCIL 229
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
AQ +L + L +I+RDLK N+++D +++DFG+A+ ++ T + GT
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAK-----RVKGRTWXLCGT 201
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
Y++PE L ++ D ++ GVL+ E
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 23/177 (12%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRN--LVRLFGCCIEHGEKILIYEYMPNKSLDCFLFD 58
L Q L+ ++NE+ + KLQ + ++RL+ I IY M ++D +
Sbjct: 90 LEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWL 146
Query: 59 PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
K + WE R + + + + +H + ++H DLK +N L+ M K+ DFGIA
Sbjct: 147 KKKKSIDPWE-RKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIA 201
Query: 119 RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKS------------DVFSFGVLV 163
D VGT YM PE A++ + S + DV+S G ++
Sbjct: 202 NQMQPDTTSVVKDSQVGTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCIL 257
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 10/155 (6%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E + E+ ++ L+H LV L + E ++IYE+M L + D + + +
Sbjct: 93 ETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVAD--EHNKMSEDE 150
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP--KISDFGIARLFGGDELQ 127
V + V +GL ++H + +H DLK NI+ + + K+ DFG+ D Q
Sbjct: 151 AVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHL--DPKQ 205
Query: 128 SNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVL 162
S K GT + +PE A +D++S GVL
Sbjct: 206 S-VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVL 239
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 59/107 (55%), Gaps = 10/107 (9%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEK--ILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVR 72
E+ L+ L+H N+V L I H EK L++EY+ +K L +L D ++
Sbjct: 50 EVSLLKDLKHANIVTLHD--IIHTEKSLTLVFEYL-DKDLKQYLDDCG--NIINMHNVKL 104
Query: 73 ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIAR 119
L + +GL Y H R +V+HRDLK N+L++ K++DFG+AR
Sbjct: 105 FLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLAR 148
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 23/177 (12%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRN--LVRLFGCCIEHGEKILIYEYMPNKSLDCFLFD 58
L Q L+ ++NE+ + KLQ + ++RL+ I IY M ++D +
Sbjct: 46 LEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWL 102
Query: 59 PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
K + WE R + + + + +H + ++H DLK +N L+ M K+ DFGIA
Sbjct: 103 KKKKSIDPWE-RKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIA 157
Query: 119 RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKS------------DVFSFGVLV 163
D VGT YM PE A++ + S + DV+S G ++
Sbjct: 158 NQMQPDTTSVVKDSQVGTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCIL 213
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 14/150 (9%)
Query: 24 HRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRILEGVAQGLLY 83
H LV L C + EY+ L +F + L E ++ L Y
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALNY 121
Query: 84 LHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIAR--LFGGDELQSNTKRIVGTYGYMS 141
LH +I+RDLK N+LLDS + K++D+G+ + L GD T GT Y++
Sbjct: 122 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD----TTSXFCGTPNYIA 174
Query: 142 PEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
PE LRG + D ++ GVL+ E ++ +
Sbjct: 175 PE-ILRGEDYGFSVDWWALGVLMFEMMAGR 203
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 14/150 (9%)
Query: 24 HRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRILEGVAQGLLY 83
H LV L C + EY+ L +F + L E ++ L Y
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALNY 168
Query: 84 LHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIAR--LFGGDELQSNTKRIVGTYGYMS 141
LH +I+RDLK N+LLDS + K++D+G+ + L GD T GT Y++
Sbjct: 169 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD----TTSTFCGTPNYIA 221
Query: 142 PEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
PE LRG + D ++ GVL+ E ++ +
Sbjct: 222 PE-ILRGEDYGFSVDWWALGVLMFEMMAGR 250
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 78 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 125
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 126 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 181
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 182 TADEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 78 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 125
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 126 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 181
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 182 TADEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 78 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 125
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 126 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 181
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 182 TADEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 11/153 (7%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRN--LVRLFGCCIEHGEKILIYEYMPNKSLDCFLFD 58
L Q L+ ++NE+ + KLQ + ++RL+ I IY M ++D +
Sbjct: 62 LEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWL 118
Query: 59 PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
K + WE R + + + + +H + ++H DLK +N L+ M K+ DFGIA
Sbjct: 119 KKKKSIDPWE-RKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIA 173
Query: 119 RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFS 151
D VGT YM PE A++ + S
Sbjct: 174 NQMQPDXXXVVKDSQVGTVNYMPPE-AIKDMSS 205
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 174
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 175 TDDEMAG----FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
AQ +L + L +I+RDLK N+L+D +++DFG A+ ++ T + GT
Sbjct: 168 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGATWTLCGT 222
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
Y++PE L ++ D ++ GVL+ E
Sbjct: 223 PEYLAPEIILSKGYNKAVDWWALGVLIYE 251
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 174
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 175 TDDEMAG----FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 23/177 (12%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRN--LVRLFGCCIEHGEKILIYEYMPNKSLDCFLFD 58
L Q L+ ++NE+ + KLQ + ++RL+ I IY M ++D +
Sbjct: 42 LEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWL 98
Query: 59 PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
K + WE R + + + + +H + ++H DLK +N L+ M K+ DFGIA
Sbjct: 99 KKKKSIDPWE-RKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIA 153
Query: 119 RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKS------------DVFSFGVLV 163
D VGT YM PE A++ + S + DV+S G ++
Sbjct: 154 NQMQPDTTSVVKDSQVGTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCIL 209
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 81 LLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGI---ARLFGGDELQSNTKRIVGTY 137
LL L H ++H D+K +NI L K+ DFG+ G E+Q R
Sbjct: 167 LLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPR----- 221
Query: 138 GYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAH 174
YM+PE L+G + +DVFS G+ +LE + + H
Sbjct: 222 -YMAPEL-LQGSYGTAADVFSLGLTILEVACNMELPH 256
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 14/150 (9%)
Query: 24 HRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRILEGVAQGLLY 83
H LV L C + EY+ L +F + L E ++ L Y
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALNY 125
Query: 84 LHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIAR--LFGGDELQSNTKRIVGTYGYMS 141
LH +I+RDLK N+LLDS + K++D+G+ + L GD T GT Y++
Sbjct: 126 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD----TTSXFCGTPNYIA 178
Query: 142 PEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
PE LRG + D ++ GVL+ E ++ +
Sbjct: 179 PE-ILRGEDYGFSVDWWALGVLMFEMMAGR 207
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 76 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 123
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 124 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-H 179
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 180 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
AQ +L + L +I+RDLK N+++D +++DFG A+ ++ T + GT
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
Y++PE L ++ D ++ GVL+ E
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 119 XQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-H 174
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 175 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 80/170 (47%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR--VR 72
E+ L+ ++H N++ L + P +SL+ F T L+G ++ V+
Sbjct: 76 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 123
Query: 73 -----------ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
++ + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 124 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-H 179
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 180 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 28/167 (16%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR---- 70
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 67 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 114
Query: 71 -VRILEGVAQGLLY-----LHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGD 124
++ + Q L+Y L + +IHRDLK SN+ ++ + KI DFG+AR D
Sbjct: 115 CAKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDD 173
Query: 125 ELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
E+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 174 EMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 23/177 (12%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRN--LVRLFGCCIEHGEKILIYEYMPNKSLDCFLFD 58
L Q L+ ++NE+ + KLQ + ++RL+ I IY M ++D +
Sbjct: 43 LEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWL 99
Query: 59 PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
K + WE R + + + + +H + ++H DLK +N L+ M K+ DFGIA
Sbjct: 100 KKKKSIDPWE-RKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIA 154
Query: 119 RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKS------------DVFSFGVLV 163
D VGT YM PE A++ + S + DV+S G ++
Sbjct: 155 NQMQPDTTSVVKDSQVGTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCIL 210
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E+F E + + + H ++V+L G E+ I I E L FL + ++
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRKFSLDL 490
Query: 70 RVRILEG--VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQ 127
IL ++ L YL R +HRD+ A N+L+ SN K+ DFG++R
Sbjct: 491 ASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 547
Query: 128 SNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETL 167
+K + +M+PE F+ SDV+ FGV + E L
Sbjct: 548 KASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 82 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 129
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 130 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-H 185
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 186 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 15/155 (9%)
Query: 13 KNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPT-KTGLLGWEMRV 71
+NE+ ++ K++H N+V L L+ + + L FD + G+ +
Sbjct: 54 ENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGEL----FDRILERGVYTEKDAS 109
Query: 72 RILEGVAQGLLYLHHYSRLRVIHRDLKASNILL---DSNMNPKISDFGIARLFGGDELQS 128
+++ V + YLH ++HRDLK N+L + N I+DFG++++ E
Sbjct: 110 LVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNG 162
Query: 129 NTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLV 163
GT GY++PE + +S D +S GV+
Sbjct: 163 IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIT 197
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 20/177 (11%)
Query: 14 NEMMLIAKLQHRNLVRLF-----GCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
E+ L+ L+H N++ L IE ++ Y+ + L + K L E
Sbjct: 68 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEV----YLVTTLMGADLNNIVKCQALSDE 123
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
++ + +GL Y+H +IHRDLK SN+ ++ + +I DFG+AR DE +
Sbjct: 124 HVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLAR--QADEEMT 178
Query: 129 NTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLL 184
V T Y +PE L + ++ D++S G ++ E L K A F +D + L
Sbjct: 179 G---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK--ALFPGSDYIDQL 230
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 67 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 114
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 115 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 170
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 171 TDDEMAG----FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 73 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 120
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 121 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR-H 176
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 177 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 81 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 128
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 129 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 184
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 185 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 174
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 175 TDDEMTGX----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 77 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 124
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 125 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 180
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 181 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 22/145 (15%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRV--- 71
E+ ++ L+H N+V L C + Y K+ +FD + L G V
Sbjct: 67 EIKILQLLKHENVVNLIEIC-----RTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK 121
Query: 72 -------RILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG-G 123
R+++ + GL Y+H R +++HRD+KA+N+L+ + K++DFG+AR F
Sbjct: 122 FTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLA 178
Query: 124 DELQSN--TKRIVGTYGYMSPEYAL 146
Q N R+V T Y PE L
Sbjct: 179 KNSQPNRYXNRVV-TLWYRPPELLL 202
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 76 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 123
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 124 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 179
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 180 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 174
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 175 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 70 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 117
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 118 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 173
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 174 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 77 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 124
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 125 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 180
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 181 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 174
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 175 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 77 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 124
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 125 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 180
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 181 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 174
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 175 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 73 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 120
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 121 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 176
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 177 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 174
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 175 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 68 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 115
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 116 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 171
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 172 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 23/177 (12%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRN--LVRLFGCCIEHGEKILIYEYMPNKSLDCFLFD 58
L Q L+ ++NE+ + KLQ + ++RL+ I IY M ++D +
Sbjct: 90 LEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWL 146
Query: 59 PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
K + WE R + + + + +H + ++H DLK +N L+ M K+ DFGIA
Sbjct: 147 KKKKSIDPWE-RKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIA 201
Query: 119 RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKS------------DVFSFGVLV 163
D VGT YM PE A++ + S + DV+S G ++
Sbjct: 202 NQMQPDTTSVVKDSQVGTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCIL 257
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 174
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 175 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 78 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 125
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 126 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 181
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 182 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 77 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 124
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 125 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR-H 180
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 181 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 20/177 (11%)
Query: 14 NEMMLIAKLQHRNLVRLF-----GCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWE 68
E+ L+ L+H N++ L IE ++ Y+ + L + K L E
Sbjct: 76 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEV----YLVTTLMGADLNNIVKCQALSDE 131
Query: 69 MRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQS 128
++ + +GL Y+H +IHRDLK SN+ ++ + +I DFG+AR DE +
Sbjct: 132 HVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLAR--QADEEMT 186
Query: 129 NTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLL 184
V T Y +PE L + ++ D++S G ++ E L K A F +D + L
Sbjct: 187 G---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK--ALFPGSDYIDQL 238
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 68 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 115
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 116 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 171
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 172 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 174
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 175 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 76 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 123
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 124 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 179
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 180 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 73 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 120
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 121 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 176
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 177 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 67 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 114
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 115 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 170
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 171 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 174
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 175 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 91 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 138
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 139 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 194
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 195 TDDEMXGX----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 174
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 175 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 67 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 114
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 115 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 170
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 171 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 83 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 130
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 131 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 186
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 187 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 73 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 120
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 121 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 176
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 177 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 83 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 130
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 131 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 186
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 187 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 83 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 130
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 131 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 186
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 187 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 91 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 138
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 139 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 194
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 195 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 41/185 (22%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEH----------GEKILIY---EYMPNKSLDCFLFDPT 60
+E+ L+A L H+ +VR + +E +K ++ EY N++L +D
Sbjct: 51 SEVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTL----YDLI 106
Query: 61 KTGLLGWEMRV--RILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
+ L + R+ + + L Y+H +IHR+LK NI +D + N KI DFG+A
Sbjct: 107 HSENLNQQRDEYWRLFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLA 163
Query: 119 R---------------LFGGDELQSNTKRIVGTYGYMSPEY-ALRGLFSIKSDVFSFGVL 162
+ L G + N +GT Y++ E G ++ K D +S G++
Sbjct: 164 KNVHRSLDILKLDSQNLPGSSD---NLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGII 220
Query: 163 VLETL 167
E +
Sbjct: 221 FFEXI 225
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 22/145 (15%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRV--- 71
E+ ++ L+H N+V L C + Y K +FD + L G V
Sbjct: 67 EIKILQLLKHENVVNLIEIC-----RTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK 121
Query: 72 -------RILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG-G 123
R+++ + GL Y+H R +++HRD+KA+N+L+ + K++DFG+AR F
Sbjct: 122 FTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLA 178
Query: 124 DELQSN--TKRIVGTYGYMSPEYAL 146
Q N R+V T Y PE L
Sbjct: 179 KNSQPNRYXNRVV-TLWYRPPELLL 202
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 94 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 141
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 142 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 197
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 198 TDDEMXG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 80/170 (47%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR--VR 72
E+ L+ ++H N++ L + P +SL+ F T L+G ++ V+
Sbjct: 82 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 129
Query: 73 -----------ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
++ + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 130 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 185
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 186 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 90 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 137
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 138 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 193
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 194 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 8/97 (8%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA-RLFGGDELQSNTKRIVG 135
+A+ ++ + +L +HRD+K NIL+D N + +++DFG +L +QS+ VG
Sbjct: 181 LAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVA--VG 238
Query: 136 TYGYMSPEY-----ALRGLFSIKSDVFSFGVLVLETL 167
T Y+SPE +G + + D +S GV + E L
Sbjct: 239 TPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEML 275
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 80/170 (47%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMR--VR 72
E+ L+ ++H N++ L + P +SL+ F T L+G ++ V+
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 73 -----------ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
++ + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 119 XQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 174
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 175 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
AQ +L + L +I+RDLK N+L+D +++DFG A+ ++ T + GT
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
Y++PE L ++ D ++ GVL+ +
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYQ 230
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 94 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 141
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 142 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 197
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 198 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 69 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 116
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 117 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 172
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 173 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 91 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 138
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 139 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 194
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 195 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 90 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 137
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+AR
Sbjct: 138 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-H 193
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 194 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 22/145 (15%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRV--- 71
E+ ++ L+H N+V L C Y K +FD + L G V
Sbjct: 66 EIKILQLLKHENVVNLIEICRTKAS-----PYNRCKGSIYLVFDFCEHDLAGLLSNVLVK 120
Query: 72 -------RILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG-G 123
R+++ + GL Y+H R +++HRD+KA+N+L+ + K++DFG+AR F
Sbjct: 121 FTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLA 177
Query: 124 DELQSN--TKRIVGTYGYMSPEYAL 146
Q N R+V T Y PE L
Sbjct: 178 KNSQPNRYXNRVV-TLWYRPPELLL 201
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 16/155 (10%)
Query: 13 KNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDP-TKTGLLGWEMRV 71
+ E+ ++ +L H N+++L E L+ E + L FD + G
Sbjct: 96 RTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGEL----FDRIVEKGYYSERDAA 151
Query: 72 RILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDS---NMNPKISDFGIARLFGGDELQS 128
++ + + + YLH ++HRDLK N+L + + KI+DFG++++ E Q
Sbjct: 152 DAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQV 205
Query: 129 NTKRIVGTYGYMSPEYALRG-LFSIKSDVFSFGVL 162
K + GT GY +PE LRG + + D++S G++
Sbjct: 206 LMKTVCGTPGYCAPE-ILRGCAYGPEVDMWSVGII 239
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 34/171 (19%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCF----LFDPTKTGLLG--- 66
E+ L+ ++H N++ L + P+++LD F L P LG
Sbjct: 73 RELRLLKHMRHENVIGLLDV------------FTPDETLDDFTDFYLVMPFMGTDLGKLM 120
Query: 67 -----WEMRVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARL 120
E R++ L + +GL Y+H +IHRDLK N+ ++ + KI DFG+AR
Sbjct: 121 KHEKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR- 176
Query: 121 FGGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
+ S V T Y +PE L + ++ D++S G ++ E ++ K
Sbjct: 177 ----QADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
AQ +L + L +I+RDLK N+++D +++DFG A+ ++ T + GT
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
Y++PE + ++ D ++ GVL+ E
Sbjct: 202 PEYLAPEIIISKGYNKAVDWWALGVLIYE 230
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 22/145 (15%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRV--- 71
E+ ++ L+H N+V L C + Y K +FD + L G V
Sbjct: 67 EIKILQLLKHENVVNLIEIC-----RTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK 121
Query: 72 -------RILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFG-G 123
R+++ + GL Y+H R +++HRD+KA+N+L+ + K++DFG+AR F
Sbjct: 122 FTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLA 178
Query: 124 DELQSN--TKRIVGTYGYMSPEYAL 146
Q N R+V T Y PE L
Sbjct: 179 KNSQPNRYXNRVV-TLWYRPPELLL 202
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 25/166 (15%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEY---MPNKSLDC-----FLFDPTKTGLL 65
E++L+ +QH N++ L Y++ MP D F K L
Sbjct: 72 RELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYL 131
Query: 66 GWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDE 125
++M +GL Y+H V+HRDLK N+ ++ + KI DFG+AR
Sbjct: 132 VYQM--------LKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR-----H 175
Query: 126 LQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
+ V T Y +PE L + ++ D++S G ++ E L+ K
Sbjct: 176 ADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 13/123 (10%)
Query: 56 LFDPTKTGLLGWEMRVRILEGVAQGLLYLH-----HYSRLRVIHRDLKASNILLDSNMNP 110
L+D + L + +R+ A GL +LH + + HRD K+ N+L+ SN+
Sbjct: 93 LYDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQC 152
Query: 111 KISDFGIARLF--GGDELQSNTKRIVGTYGYMSPEY---ALRG--LFSIK-SDVFSFGVL 162
I+D G+A + G D L VGT YM+PE +R S K +D+++FG++
Sbjct: 153 CIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLV 212
Query: 163 VLE 165
+ E
Sbjct: 213 LWE 215
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 25/166 (15%)
Query: 14 NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEY---MPNKSLDC-----FLFDPTKTGLL 65
E++L+ +QH N++ L Y++ MP D F K L
Sbjct: 90 RELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYL 149
Query: 66 GWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDE 125
++M +GL Y+H V+HRDLK N+ ++ + KI DFG+AR
Sbjct: 150 VYQM--------LKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR-----H 193
Query: 126 LQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
+ V T Y +PE L + ++ D++S G ++ E L+ K
Sbjct: 194 ADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 7/108 (6%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
+ L YLH SR V++RD+K N++LD + + KI+DFG+ + G + K GT
Sbjct: 114 IVSALEYLH--SR-DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGT 168
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLL 184
Y++PE + D + GV++ E + + FYN D L
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHERLF 214
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
+ L YLH V++RD+K N++LD + + KI+DFG+ + G + K GT
Sbjct: 119 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGT 173
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLL 184
Y++PE + D + GV++ E + + FYN D L
Sbjct: 174 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHERLF 219
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI D+G+AR
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLAR-H 174
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 175 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
AQ +L + L +I+RDLK N+L+D +++DFG A+ ++ T + GT
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
Y++P L ++ D ++ GVL+ E
Sbjct: 202 PEYLAPAIILSKGYNKAVDWWALGVLIYE 230
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
+ L YLH V++RD+K N++LD + + KI+DFG+ + G + K GT
Sbjct: 114 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGT 168
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTD 179
Y++PE + D + GV++ E + + FYN D
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD 209
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 7/108 (6%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
+ L YLH SR V++RD+K N++LD + + KI+DFG+ + G + K GT
Sbjct: 114 IVSALEYLH--SR-DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGT 168
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLL 184
Y++PE + D + GV++ E + + FYN D L
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHERLF 214
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
+ L YLH V++RD+K N++LD + + KI+DFG+ + G + K GT
Sbjct: 114 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGT 168
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLTLL 184
Y++PE + D + GV++ E + + FYN D L
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHERLF 214
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 15/109 (13%)
Query: 71 VRILEGVAQGLLYLH-----HYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF--GG 123
+RI+ +A GL +LH + + HRDLK+ NIL+ N I+D G+A +
Sbjct: 108 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST 167
Query: 124 DELQSNTKRIVGTYGYMSPEYALRGLFSI-------KSDVFSFGVLVLE 165
++L VGT YM+PE L + + D+++FG+++ E
Sbjct: 168 NQLDVGNNPRVGTKRYMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWE 215
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 15/109 (13%)
Query: 71 VRILEGVAQGLLYLH-----HYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF--GG 123
+RI+ +A GL +LH + + HRDLK+ NIL+ N I+D G+A +
Sbjct: 108 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST 167
Query: 124 DELQSNTKRIVGTYGYMSPEYALRGLFSI-------KSDVFSFGVLVLE 165
++L VGT YM+PE L + + D+++FG+++ E
Sbjct: 168 NQLDVGNNPRVGTKRYMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWE 215
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
+ L YLH SR V++RD+K N++LD + + KI+DFG+ + G + K GT
Sbjct: 114 IVSALEYLH--SR-DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGT 168
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTD 179
Y++PE + D + GV++ E + + FYN D
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD 209
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 15/109 (13%)
Query: 71 VRILEGVAQGLLYLH-----HYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF--GG 123
+RI+ +A GL +LH + + HRDLK+ NIL+ N I+D G+A +
Sbjct: 137 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST 196
Query: 124 DELQSNTKRIVGTYGYMSPEYALRGLFSI-------KSDVFSFGVLVLE 165
++L VGT YM+PE L + + D+++FG+++ E
Sbjct: 197 NQLDVGNNPRVGTKRYMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWE 244
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
+ L YLH V++RD+K N++LD + + KI+DFG+ + G + K GT
Sbjct: 117 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGT 171
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTD 179
Y++PE + D + GV++ E + + FYN D
Sbjct: 172 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD 212
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 23/177 (12%)
Query: 1 LSSQSGQGLEEFKNEMMLIAKLQHRN--LVRLFGCCIEHGEKILIYEYMPNKSLDCFLFD 58
L Q L+ ++NE+ + KLQ + ++RL+ I IY M ++D +
Sbjct: 90 LEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWL 146
Query: 59 PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIA 118
K + WE R + + + + +H + ++H DLK +N L+ M K+ DFGIA
Sbjct: 147 KKKKSIDPWE-RKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIA 201
Query: 119 RLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKS------------DVFSFGVLV 163
D VG YM PE A++ + S + DV+S G ++
Sbjct: 202 NQMQPDTTSVVKDSQVGAVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCIL 257
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DFG+ R
Sbjct: 119 SQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLCR-H 174
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 175 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 11/160 (6%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E+F E + + + H ++V+L G E+ I I E L FL + ++
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRKFSLDL 110
Query: 70 RVRILEG--VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQ 127
IL ++ L YL R +HRD+ A N+L+ + K+ DFG++R
Sbjct: 111 ASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYY 167
Query: 128 SNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETL 167
+K + +M+PE F+ SDV+ FGV + E L
Sbjct: 168 KASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 21/120 (17%)
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDS-------------NMNPKISDFGI 117
+ +L +A G+ +LH L++IHRDLK NIL+ + N+ ISDFG+
Sbjct: 136 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 118 ARLF--GGDELQSNTKRIVGTYGYMSPEY---ALRGLFSIKSDVFSFGVLVLETLSSKKN 172
+ G + N GT G+ +PE + + + D+FS G + LS K+
Sbjct: 193 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 9/156 (5%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRIL 74
E+ ++ +L+H NLV L L++EY + L D + G+ ++ I
Sbjct: 52 EIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVL--HELDRYQRGVPEHLVK-SIT 108
Query: 75 EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIV 134
Q + + H ++ IHRD+K NIL+ + K+ DFG ARL G + + V
Sbjct: 109 WQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE--V 163
Query: 135 GTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSS 169
T Y SPE + + DV++ G + E LS
Sbjct: 164 ATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 21/120 (17%)
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDS-------------NMNPKISDFGI 117
+ +L +A G+ +LH L++IHRDLK NIL+ + N+ ISDFG+
Sbjct: 136 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 118 ARLF--GGDELQSNTKRIVGTYGYMSPEY---ALRGLFSIKSDVFSFGVLVLETLSSKKN 172
+ G + N GT G+ +PE + + + D+FS G + LS K+
Sbjct: 193 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
AQ +L + L +I+RDLK N+L+D +++DFG A+ ++ T + GT
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
Query: 137 YGYMSPEYALRGLFSIKSDVFSFGVLVLE 165
++PE L ++ D ++ GVL+ E
Sbjct: 202 PEALAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
+ + +L + +L +HRD+K N+LLD N + +++DFG + L D+ + VGT
Sbjct: 181 IGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGT 239
Query: 137 YGYMSPE--YALR---GLFSIKSDVFSFGVLVLETL 167
Y+SPE A+ G + + D +S GV + E L
Sbjct: 240 PDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEML 275
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 11/166 (6%)
Query: 9 LEEFK-NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGW 67
LE F+ E++ A L +V L+G E + E + SL + + G L
Sbjct: 93 LEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI---KQMGCLPE 149
Query: 68 EMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMN-PKISDFGIARLFGGDEL 126
+ + L +GL YLH R++H D+KA N+LL S+ + + DFG A D L
Sbjct: 150 DRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL 206
Query: 127 QSN---TKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSS 169
+ I GT +M+PE + K D++S ++L L+
Sbjct: 207 GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 11/166 (6%)
Query: 9 LEEFK-NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGW 67
LE F+ E++ A L +V L+G E + E + SL + + G L
Sbjct: 109 LEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI---KQMGCLPE 165
Query: 68 EMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMN-PKISDFGIARLFGGDEL 126
+ + L +GL YLH R++H D+KA N+LL S+ + + DFG A D L
Sbjct: 166 DRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL 222
Query: 127 QSN---TKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSS 169
+ I GT +M+PE + K D++S ++L L+
Sbjct: 223 GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
+ + +L + +L +HRD+K N+LLD N + +++DFG + L D+ + VGT
Sbjct: 197 IGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGT 255
Query: 137 YGYMSPE--YALR---GLFSIKSDVFSFGVLVLETL 167
Y+SPE A+ G + + D +S GV + E L
Sbjct: 256 PDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEML 291
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 25/124 (20%)
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDS-------------NMNPKISDFGI 117
+ +L +A G+ +LH L++IHRDLK NIL+ + N+ ISDFG+
Sbjct: 118 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
Query: 118 ARLF--GGDELQSNTKRIVGTYGYMSPE-------YALRGLFSIKSDVFSFGVLVLETLS 168
+ G ++N GT G+ +PE + + D+FS G + LS
Sbjct: 175 CKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
Query: 169 SKKN 172
K+
Sbjct: 235 KGKH 238
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 11/166 (6%)
Query: 9 LEEFK-NEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGW 67
LE F+ E++ A L +V L+G E + E + SL + + G L
Sbjct: 107 LEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI---KQMGCLPE 163
Query: 68 EMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMN-PKISDFGIARLFGGDEL 126
+ + L +GL YLH R++H D+KA N+LL S+ + + DFG A D L
Sbjct: 164 DRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL 220
Query: 127 QSN---TKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSS 169
+ I GT +M+PE + K D++S ++L L+
Sbjct: 221 GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 11/160 (6%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E+F E + + + H ++V+L G E+ I I E L FL + ++
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRKFSLDL 490
Query: 70 RVRILEG--VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQ 127
IL ++ L YL R +HRD+ A N+L+ + K+ DFG++R
Sbjct: 491 ASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYY 547
Query: 128 SNTKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETL 167
+K + +M+PE F+ SDV+ FGV + E L
Sbjct: 548 KASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 12/159 (7%)
Query: 13 KNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVR 72
K E+ ++ +HRN++ L E ++I+E++ LD F T L V
Sbjct: 49 KKEISILNIARHRNILHLHESFESMEELVMIFEFISG--LDIFERINTSAFELNEREIVS 106
Query: 73 ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP--KISDFGIAR-LFGGDELQSN 129
+ V + L +LH ++ + H D++ NI+ + + KI +FG AR L GD N
Sbjct: 107 YVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD----N 159
Query: 130 TKRIVGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
+ + Y +PE + S +D++S G LV LS
Sbjct: 160 FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLS 198
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI FG+AR
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLAR-H 174
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 175 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 17/168 (10%)
Query: 10 EEFKN-EMMLIAKLQHRNLVRLFGCCIEHGEKI------LIYEYMPNKSLDCFL-FDPTK 61
+ FKN E+ ++ KL H N+VRL GEK L+ +Y+P + K
Sbjct: 91 KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 150
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP-KISDFGIARL 120
L +++ + + + + L Y+H + + HRD+K N+LLD + K+ DFG A+
Sbjct: 151 QTLPVIYVKLYMYQ-LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 206
Query: 121 FGGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETL 167
E N I Y Y +PE ++ DV+S G ++ E L
Sbjct: 207 LVRGE--PNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 251
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI D G+AR
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLAR-H 174
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 175 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 17/168 (10%)
Query: 10 EEFKN-EMMLIAKLQHRNLVRLFGCCIEHGEKI------LIYEYMPNKSLDCFL-FDPTK 61
+ FKN E+ ++ KL H N+VRL GEK L+ +Y+P + K
Sbjct: 69 KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 128
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP-KISDFGIARL 120
L +++ + + + + L Y+H + + HRD+K N+LLD + K+ DFG A+
Sbjct: 129 QTLPVIYVKLYMYQ-LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 184
Query: 121 FGGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETL 167
E N I Y Y +PE ++ DV+S G ++ E L
Sbjct: 185 LVRGE--PNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 229
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI DF +AR
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFYLAR-H 174
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 175 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 31/179 (17%)
Query: 15 EMMLIAKLQ-HRNLVRLFGCCIEHGEK--ILIYEYMPNKSLDCFLFDPTKTGLLGWEMRV 71
E+M++ +L H N+V L ++ L+++YM + L + +L +
Sbjct: 58 EIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM-----ETDLHAVIRANILEPVHKQ 112
Query: 72 RILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGG-------- 123
++ + + + YLH ++HRD+K SNILL++ + K++DFG++R F
Sbjct: 113 YVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNI 169
Query: 124 -----------DELQSNTKRIVGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSK 170
D+ Q V T Y +PE L K D++S G ++ E L K
Sbjct: 170 PLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI D G+AR
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLAR-H 174
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 175 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 17/168 (10%)
Query: 10 EEFKN-EMMLIAKLQHRNLVRLFGCCIEHGEKI------LIYEYMPNKSLDCFL-FDPTK 61
+ FKN E+ ++ KL H N+VRL GEK L+ +Y+P + K
Sbjct: 69 KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 128
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP-KISDFGIARL 120
L +++ + + + + L Y+H + + HRD+K N+LLD + K+ DFG A+
Sbjct: 129 QTLPVIYVKLYMYQ-LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 184
Query: 121 FGGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETL 167
E N I Y Y +PE ++ DV+S G ++ E L
Sbjct: 185 LVRGE--PNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 229
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 17/168 (10%)
Query: 10 EEFKN-EMMLIAKLQHRNLVRLFGCCIEHGEKI------LIYEYMPNKSLDCFL-FDPTK 61
+ FKN E+ ++ KL H N+VRL GEK L+ +Y+P + K
Sbjct: 65 KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 124
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP-KISDFGIARL 120
L +++ + + + + L Y+H + + HRD+K N+LLD + K+ DFG A+
Sbjct: 125 QTLPVIYVKLYMYQ-LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 180
Query: 121 FGGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETL 167
E N I Y Y +PE ++ DV+S G ++ E L
Sbjct: 181 LVRGE--PNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 225
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 17/168 (10%)
Query: 10 EEFKN-EMMLIAKLQHRNLVRLFGCCIEHGEKI------LIYEYMPNKSLDCFL-FDPTK 61
+ FKN E+ ++ KL H N+VRL GEK L+ +Y+P + K
Sbjct: 85 KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 144
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP-KISDFGIARL 120
L +++ + + + + L Y+H + + HRD+K N+LLD + K+ DFG A+
Sbjct: 145 QTLPVIYVKLYMYQ-LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 200
Query: 121 FGGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETL 167
E N I Y Y +PE ++ DV+S G ++ E L
Sbjct: 201 LVRGE--PNVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 245
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 17/168 (10%)
Query: 10 EEFKN-EMMLIAKLQHRNLVRLFGCCIEHGEKI------LIYEYMPNKSLDCFL-FDPTK 61
+ FKN E+ ++ KL H N+VRL GEK L+ +Y+P + K
Sbjct: 76 KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 135
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP-KISDFGIARL 120
L +++ + + + + L Y+H + + HRD+K N+LLD + K+ DFG A+
Sbjct: 136 QTLPVIYVKLYMYQ-LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 191
Query: 121 FGGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETL 167
E N I Y Y +PE ++ DV+S G ++ E L
Sbjct: 192 LVRGE--PNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 236
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 17/168 (10%)
Query: 10 EEFKN-EMMLIAKLQHRNLVRLFGCCIEHGEKI------LIYEYMPNKSLDCFL-FDPTK 61
+ FKN E+ ++ KL H N+VRL GEK L+ +Y+P + K
Sbjct: 57 KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 116
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP-KISDFGIARL 120
L +++ + + + + L Y+H + + HRD+K N+LLD + K+ DFG A+
Sbjct: 117 QTLPVIYVKLYMYQ-LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
Query: 121 FGGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETL 167
E N I Y Y +PE ++ DV+S G ++ E L
Sbjct: 173 LVRGE--PNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 27/134 (20%)
Query: 39 EKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLK 98
+KIL ++ + LF TKT + YLH V+HRDLK
Sbjct: 105 DKILRQKFFSEREASAVLFTITKT------------------VEYLHAQG---VVHRDLK 143
Query: 99 ASNIL-LDSNMNP---KISDFGIARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIKS 154
SNIL +D + NP +I DFG A+ + T T +++PE R +
Sbjct: 144 PSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTP--CYTANFVAPEVLERQGYDAAC 201
Query: 155 DVFSFGVLVLETLS 168
D++S GVL+ L+
Sbjct: 202 DIWSLGVLLYTXLT 215
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 17/168 (10%)
Query: 10 EEFKN-EMMLIAKLQHRNLVRLFGCCIEHGEKI------LIYEYMPNKSLDCFL-FDPTK 61
+ FKN E+ ++ KL H N+VRL GEK L+ +Y+P + K
Sbjct: 62 KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 121
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP-KISDFGIARL 120
L +++ + + + + L Y+H + + HRD+K N+LLD + K+ DFG A+
Sbjct: 122 QTLPVIYVKLYMYQ-LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 177
Query: 121 FGGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETL 167
E N I Y Y +PE ++ DV+S G ++ E L
Sbjct: 178 LVRGE--PNVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 222
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 17/168 (10%)
Query: 10 EEFKN-EMMLIAKLQHRNLVRLFGCCIEHGEKI------LIYEYMPNKSLDCFL-FDPTK 61
+ FKN E+ ++ KL H N+VRL GEK L+ +Y+P + K
Sbjct: 58 KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 117
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP-KISDFGIARL 120
L +++ + + + + L Y+H + + HRD+K N+LLD + K+ DFG A+
Sbjct: 118 QTLPVIYVKLYMYQ-LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 173
Query: 121 FGGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETL 167
E N I Y Y +PE ++ DV+S G ++ E L
Sbjct: 174 LVRGE--PNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 218
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 17/168 (10%)
Query: 10 EEFKN-EMMLIAKLQHRNLVRLFGCCIEHGEKI------LIYEYMPNKSLDCFL-FDPTK 61
+ FKN E+ ++ KL H N+VRL GEK L+ +Y+P + K
Sbjct: 57 KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 116
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP-KISDFGIARL 120
L +++ + + + + L Y+H + + HRD+K N+LLD + K+ DFG A+
Sbjct: 117 QTLPVIYVKLYMYQ-LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
Query: 121 FGGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETL 167
E N I Y Y +PE ++ DV+S G ++ E L
Sbjct: 173 LVRGE--PNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 17/168 (10%)
Query: 10 EEFKN-EMMLIAKLQHRNLVRLFGCCIEHGEKI------LIYEYMPNKSLDCFL-FDPTK 61
+ FKN E+ ++ KL H N+VRL GEK L+ +Y+P + K
Sbjct: 61 KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 120
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP-KISDFGIARL 120
L +++ + + + + L Y+H + + HRD+K N+LLD + K+ DFG A+
Sbjct: 121 QTLPVIYVKLYMYQ-LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 176
Query: 121 FGGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETL 167
E N I Y Y +PE ++ DV+S G ++ E L
Sbjct: 177 LVRGE--PNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 221
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 17/168 (10%)
Query: 10 EEFKN-EMMLIAKLQHRNLVRLFGCCIEHGEKI------LIYEYMPNKSLDCFL-FDPTK 61
+ FKN E+ ++ KL H N+VRL GEK L+ +Y+P + K
Sbjct: 91 KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 150
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP-KISDFGIARL 120
L +++ + + + + L Y+H + + HRD+K N+LLD + K+ DFG A+
Sbjct: 151 QTLPVIYVKLYMYQ-LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 206
Query: 121 FGGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETL 167
E N I Y Y +PE ++ DV+S G ++ E L
Sbjct: 207 LVRGE--PNVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 251
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 17/168 (10%)
Query: 10 EEFKN-EMMLIAKLQHRNLVRLFGCCIEHGEKI------LIYEYMPNKSLDCFL-FDPTK 61
+ FKN E+ ++ KL H N+VRL GEK L+ +Y+P + K
Sbjct: 57 KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAK 116
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP-KISDFGIARL 120
L +++ + + + + L Y+H + + HRD+K N+LLD + K+ DFG A+
Sbjct: 117 QTLPVIYVKLYMYQ-LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
Query: 121 FGGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETL 167
E N I Y Y +PE ++ DV+S G ++ E L
Sbjct: 173 LVRGE--PNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 34/170 (20%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM----- 69
E+ L+ ++H N++ L + P +SL+ F T L+G ++
Sbjct: 71 ELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 70 -------RVRIL-EGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF 121
V+ L + +GL Y+H +IHRDLK SN+ ++ + KI D G+AR
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDGGLAR-H 174
Query: 122 GGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DE+ V T Y +PE L + ++ D++S G ++ E L+ +
Sbjct: 175 TDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 17/168 (10%)
Query: 10 EEFKN-EMMLIAKLQHRNLVRLFGCCIEHGEKI------LIYEYMPNKSLDCFL-FDPTK 61
+ FKN E+ ++ KL H N+VRL GEK L+ +Y+P + K
Sbjct: 93 KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 152
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP-KISDFGIARL 120
L +++ + + + + L Y+H + + HRD+K N+LLD + K+ DFG A+
Sbjct: 153 QTLPVIYVKLYMYQ-LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 208
Query: 121 FGGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETL 167
E N I Y Y +PE ++ DV+S G ++ E L
Sbjct: 209 LVRGE--PNVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 253
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 17/168 (10%)
Query: 10 EEFKN-EMMLIAKLQHRNLVRLFGCCIEHGEKI------LIYEYMPNKSLDCFL-FDPTK 61
+ FKN E+ ++ KL H N+VRL GEK L+ +Y+P + K
Sbjct: 95 KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 154
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP-KISDFGIARL 120
L +++ + + + + L Y+H + + HRD+K N+LLD + K+ DFG A+
Sbjct: 155 QTLPVIYVKLYMYQ-LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 210
Query: 121 FGGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETL 167
E N I Y Y +PE ++ DV+S G ++ E L
Sbjct: 211 LVRGE--PNVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 255
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 17/168 (10%)
Query: 10 EEFKN-EMMLIAKLQHRNLVRLFGCCIEHGEKI------LIYEYMPNKSLDCFL-FDPTK 61
+ FKN E+ ++ KL H N+VRL GEK L+ +Y+P + K
Sbjct: 136 KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 195
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP-KISDFGIARL 120
L +++ + + + + L Y+H + + HRD+K N+LLD + K+ DFG A+
Sbjct: 196 QTLPVIYVKLYMYQ-LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 251
Query: 121 FGGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETL 167
E N I Y Y +PE ++ DV+S G ++ E L
Sbjct: 252 LVRGE--PNVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 296
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 15/103 (14%)
Query: 73 ILEGVAQGLLYLHHYSRLRVIHRDLKASNIL-LDSNMNP---KISDFGIARLFGGDELQS 128
+L + + + YLH V+HRDLK SNIL +D + NP +I DFG A+ +L++
Sbjct: 126 VLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAK-----QLRA 177
Query: 129 NTKRIVG---TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
++ T +++PE R + D++S G+L+ L+
Sbjct: 178 ENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLA 220
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 79 QGLLYLHHYSRLRVIHRDLKASNILLDSNMNP---KISDFGIARLFGGDELQSNTKRIVG 135
Q LL + + +IHRDLK N+LL S KI+DFG +++ G L + + G
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM---RTLCG 178
Query: 136 TYGYMSPEYALR---GLFSIKSDVFSFGVLVLETLS 168
T Y++PE + ++ D +S GV++ LS
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 214
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 79 QGLLYLHHYSRLRVIHRDLKASNILLDSNMNP---KISDFGIARLFGGDELQSNTKRIVG 135
Q LL + + +IHRDLK N+LL S KI+DFG +++ G L + + G
Sbjct: 121 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM---RTLCG 177
Query: 136 TYGYMSPEYALR---GLFSIKSDVFSFGVLVLETLS 168
T Y++PE + ++ D +S GV++ LS
Sbjct: 178 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 213
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 79 QGLLYLHHYSRLRVIHRDLKASNILLDSNMNP---KISDFGIARLFGGDELQSNTKRIVG 135
Q LL + + +IHRDLK N+LL S KI+DFG +++ G L + + G
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM---RTLCG 178
Query: 136 TYGYMSPEYALR---GLFSIKSDVFSFGVLVLETLS 168
T Y++PE + ++ D +S GV++ LS
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 214
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 25/124 (20%)
Query: 71 VRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDS-------------NMNPKISDFGI 117
+ +L +A G+ +LH L++IHRDLK NIL+ + N+ ISDFG+
Sbjct: 118 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
Query: 118 ARLF--GGDELQSNTKRIVGTYGYMSPE-------YALRGLFSIKSDVFSFGVLVLETLS 168
+ G + N GT G+ +PE + + D+FS G + LS
Sbjct: 175 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
Query: 169 SKKN 172
K+
Sbjct: 235 KGKH 238
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 17/168 (10%)
Query: 10 EEFKN-EMMLIAKLQHRNLVRLFGCCIEHGEKI------LIYEYMPNKSLDCFL-FDPTK 61
+ FKN E+ ++ KL H N+VRL GEK L+ +Y+P + K
Sbjct: 70 KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 129
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP-KISDFGIARL 120
L +++ + + + + L Y+H + + HRD+K N+LLD + K+ DFG A+
Sbjct: 130 QTLPVIYVKLYMYQ-LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 185
Query: 121 FGGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETL 167
E N I Y Y +PE ++ DV+S G ++ E L
Sbjct: 186 LVRGE--PNVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 230
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 79 QGLLYLHHYSRLRVIHRDLKASNILLDSNMNP---KISDFGIARLFGGDELQSNTKRIVG 135
Q LL + + +IHRDLK N+LL S KI+DFG +++ G L + + G
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM---RTLCG 178
Query: 136 TYGYMSPEYALR---GLFSIKSDVFSFGVLVLETLS 168
T Y++PE + ++ D +S GV++ LS
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 214
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 58/129 (44%), Gaps = 18/129 (13%)
Query: 86 HYSRLRVIHRDLKASNILL---DSNMNPKISDFGIARLFGGDELQSNTKRIVGTYGYMSP 142
H + V+HRDLK N+L + N+ KI DFG ARL D K T Y +P
Sbjct: 121 HMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD--NQPLKTPCFTLHYAAP 178
Query: 143 EYALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTD-SLTLLGHAWNLWNDGRAWELMD 201
E + + D++S GV++ LS + F + D SLT A E+M
Sbjct: 179 ELLNQNGYDESCDLWSLGVILYTMLSGQ--VPFQSHDRSLTCTS----------AVEIMK 226
Query: 202 SILQNDASY 210
I + D S+
Sbjct: 227 KIKKGDFSF 235
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 33/137 (24%)
Query: 39 EKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLK 98
+KIL ++ + LF TKT + YLH V+HRDLK
Sbjct: 105 DKILRQKFFSEREASAVLFTITKT------------------VEYLHAQG---VVHRDLK 143
Query: 99 ASNIL-LDSNMNP---KISDFGIARLFGGDELQSNTKRIVG---TYGYMSPEYALRGLFS 151
SNIL +D + NP +I DFG A+ +L++ ++ T +++PE R +
Sbjct: 144 PSNILYVDESGNPESIRICDFGFAK-----QLRAENGLLMTPCYTANFVAPEVLERQGYD 198
Query: 152 IKSDVFSFGVLVLETLS 168
D++S GVL+ L+
Sbjct: 199 AACDIWSLGVLLYTMLT 215
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 15/103 (14%)
Query: 73 ILEGVAQGLLYLHHYSRLRVIHRDLKASNIL-LDSNMNP---KISDFGIARLFGGDELQS 128
+L + + + YLH V+HRDLK SNIL +D + NP +I DFG A+ +L++
Sbjct: 126 VLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAK-----QLRA 177
Query: 129 NTKRIVG---TYGYMSPEYALRGLFSIKSDVFSFGVLVLETLS 168
++ T +++PE R + D++S G+L+ L+
Sbjct: 178 ENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLA 220
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 79 QGLLYLHHYSRLRVIHRDLKASNILLDSNMNP---KISDFGIARLFGGDELQSNTKRIVG 135
Q LL + + +IHRDLK N+LL S KI+DFG +++ G L + + G
Sbjct: 128 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM---RTLCG 184
Query: 136 TYGYMSPEYALR---GLFSIKSDVFSFGVLVLETLS 168
T Y++PE + ++ D +S GV++ LS
Sbjct: 185 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 220
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 17/168 (10%)
Query: 10 EEFKN-EMMLIAKLQHRNLVRLFGCCIEHGEKI------LIYEYMPNKSLDCFL-FDPTK 61
+ FKN E+ ++ KL H N+VRL GEK L+ +Y+P + K
Sbjct: 57 KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 116
Query: 62 TGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP-KISDFGIARL 120
L +++ + + + + L Y+H + + HRD+K N+LLD + K+ DFG A+
Sbjct: 117 QTLPVIYVKLYMYQ-LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
Query: 121 FGGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETL 167
E N I Y Y +PE ++ DV+S G ++ E L
Sbjct: 173 LVRGE--PNVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 18/171 (10%)
Query: 7 QGLEEFKN-EMMLIAKLQHRNLVRLFGCCIEHGEKI------LIYEYMPNKSLDCFL-FD 58
QG + FKN E+ ++ KL H N+VRL GEK L+ +Y+P +
Sbjct: 55 QG-KAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 113
Query: 59 PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP-KISDFGI 117
K L +++ + + + + L Y+H + + HRD+K N+LLD + K+ DFG
Sbjct: 114 RAKQTLPVIYVKLYMYQ-LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGS 169
Query: 118 ARLFGGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETL 167
A+ E N I Y Y +PE ++ DV+S G ++ E L
Sbjct: 170 AKQLVRGE--PNVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 81 LLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGTYGYM 140
LL LH V+HRDL NILL N + I DF +AR D +N V Y
Sbjct: 144 LLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR---EDTADANKTHYVTHRWYR 200
Query: 141 SPEYALR-GLFSIKSDVFSFGVLVLETLSSK---KNAHFYN 177
+PE ++ F+ D++S G ++ E + K + + FYN
Sbjct: 201 APELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN 241
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 81 LLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGTYGYM 140
LL LH V+HRDL NILL N + I DF +AR D +N V Y
Sbjct: 144 LLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR---EDTADANKTHYVTHRWYR 200
Query: 141 SPEYALR-GLFSIKSDVFSFGVLVLETLSSK---KNAHFYN 177
+PE ++ F+ D++S G ++ E + K + + FYN
Sbjct: 201 APELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN 241
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 18/171 (10%)
Query: 7 QGLEEFKN-EMMLIAKLQHRNLVRLFGCCIEHGEKI------LIYEYMPNKSLDCFL-FD 58
QG + FKN E+ ++ KL H N+VRL GEK L+ +Y+P +
Sbjct: 55 QG-KAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 113
Query: 59 PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP-KISDFGI 117
K L +++ + + + + L Y+H + + HRD+K N+LLD + K+ DFG
Sbjct: 114 RAKQTLPVIYVKLYMYQ-LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGS 169
Query: 118 ARLFGGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETL 167
A+ E N I Y Y +PE ++ DV+S G ++ E L
Sbjct: 170 AKQLVRGE--PNVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 18/171 (10%)
Query: 7 QGLEEFKN-EMMLIAKLQHRNLVRLFGCCIEHGEKI------LIYEYMPNKSLDCFL-FD 58
QG + FKN E+ ++ KL H N+VRL GEK L+ +Y+P +
Sbjct: 55 QG-KAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYS 113
Query: 59 PTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNP-KISDFGI 117
K L +++ + + + + L Y+H + + HRD+K N+LLD + K+ DFG
Sbjct: 114 RAKQTLPVIYVKLYMYQ-LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGS 169
Query: 118 ARLFGGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETL 167
A+ E N I Y Y +PE ++ DV+S G ++ E L
Sbjct: 170 AKQLVRGE--PNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 79 QGLLYLHHYSRLRVIHRDLKASNILLDSNMNP---KISDFGIARLFGGDELQSNTKRIVG 135
Q LL + + +IHRDLK N+LL S KI+DFG +++ G L + + G
Sbjct: 247 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM---RTLCG 303
Query: 136 TYGYMSPEYALR---GLFSIKSDVFSFGVLVLETLS 168
T Y++PE + ++ D +S GV++ LS
Sbjct: 304 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 339
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 79 QGLLYLHHYSRLRVIHRDLKASNILLDSNMNP---KISDFGIARLFGGDELQSNTKRIVG 135
Q LL + + +IHRDLK N+LL S KI+DFG +++ G L + + G
Sbjct: 261 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM---RTLCG 317
Query: 136 TYGYMSPEYALR---GLFSIKSDVFSFGVLVLETLS 168
T Y++PE + ++ D +S GV++ LS
Sbjct: 318 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 353
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 82/187 (43%), Gaps = 32/187 (17%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E F +++KL H++LV +G C+ E IL+ E++ SLD +L + W++
Sbjct: 57 ESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKL 116
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILL-----DSNMNP---KISDFGIA-RL 120
V Q +H +IH ++ A NILL NP K+SD GI+ +
Sbjct: 117 EV-----AKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV 171
Query: 121 FGGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLE----------TLSS 169
D LQ +RI ++ PE ++ +D +SFG + E L S
Sbjct: 172 LPKDILQ---ERI----PWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS 224
Query: 170 KKNAHFY 176
++ FY
Sbjct: 225 QRKLQFY 231
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 10/111 (9%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDEL-QSNTKRIVG 135
A+ +L L + +IHRD+K N+LLD + + K++DFG DE + VG
Sbjct: 180 TAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKM--DETGMVHCDTAVG 237
Query: 136 TYGYMSPEY----ALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLT 182
T Y+SPE G + + D +S GV + E L + FY DSL
Sbjct: 238 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG--DTPFY-ADSLV 285
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 106/223 (47%), Gaps = 23/223 (10%)
Query: 7 QGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKI---------LIYEYMPNKSLDCFLF 57
Q ++ E+ +I +L H N+V++F G ++ L Y+ + ++ L
Sbjct: 50 QSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLA 109
Query: 58 DPTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDS-NMNPKISDFG 116
+ + G L E + + +GL Y+H + V+HRDLK +N+ +++ ++ KI DFG
Sbjct: 110 NVLEQGPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFG 166
Query: 117 IARLFGGDELQSNTKRI---VGTYGYMSPEYALRGLFSIKS-DVFSFGVLVLETLSSKK- 171
+AR+ D S+ + + T Y SP L K+ D+++ G + E L+ K
Sbjct: 167 LARIM--DPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTL 224
Query: 172 NAHFYNTDSLTLLGHAWNLWNDGRAWELMDSI---LQNDASYP 211
A + + + L+ + + ++ EL+ I ++ND + P
Sbjct: 225 FAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEP 267
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 58/137 (42%), Gaps = 32/137 (23%)
Query: 23 QHRNLVRLFGCCIEHGEKI----------LIYEYMPNKSLDCFLFDPTKTGLLGWEMRVR 72
+H N++R F C E + + EY+ K +P +
Sbjct: 76 EHPNVIRYF--CTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEP-----------IT 122
Query: 73 ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLD-----SNMNPKISDFGIA-RLFGGDEL 126
+L+ GL +LH L ++HRDLK NIL+ + ISDFG+ +L G
Sbjct: 123 LLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHS 179
Query: 127 QSNTKRIVGTYGYMSPE 143
S + GT G+++PE
Sbjct: 180 FSRRSGVPGTEGWIAPE 196
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 8/114 (7%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYE--YMPNKSLDCFLFDPTKTGLLGWEMRVR 72
E+ ++ +L+ ++RL I E +L ++ Y+ + D L KT + E V+
Sbjct: 77 EITILNRLKSDYIIRLHDLII--PEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVK 134
Query: 73 -ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDE 125
IL + G ++H +IHRDLK +N LL+ + + KI DFG+AR D+
Sbjct: 135 TILYNLLLGEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDK 185
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 32/187 (17%)
Query: 10 EEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEM 69
E F +++KL H++LV +G C E IL+ E++ SLD +L + W++
Sbjct: 57 ESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKL 116
Query: 70 RVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILL-----DSNMNP---KISDFGIA-RL 120
V Q +H +IH ++ A NILL NP K+SD GI+ +
Sbjct: 117 EV-----AKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV 171
Query: 121 FGGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLE----------TLSS 169
D LQ +RI ++ PE ++ +D +SFG + E L S
Sbjct: 172 LPKDILQ---ERI----PWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS 224
Query: 170 KKNAHFY 176
++ FY
Sbjct: 225 QRKLQFY 231
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
A+ +L L + IHRD+K N+LLD + + K++DFG + E VGT
Sbjct: 179 TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAVGT 237
Query: 137 YGYMSPEY----ALRGLFSIKSDVFSFGVLVLETL 167
Y+SPE G + + D +S GV + E L
Sbjct: 238 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 272
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 8/110 (7%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
A+ +L L + IHRD+K N+LLD + + K++DFG + E VGT
Sbjct: 179 TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAVGT 237
Query: 137 YGYMSPEY----ALRGLFSIKSDVFSFGVLVLETLSSKKNAHFYNTDSLT 182
Y+SPE G + + D +S GV + E L + FY DSL
Sbjct: 238 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG--DTPFY-ADSLV 284
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGT 136
A+ +L L + IHRD+K N+LLD + + K++DFG + E VGT
Sbjct: 174 TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAVGT 232
Query: 137 YGYMSPEY----ALRGLFSIKSDVFSFGVLVLETL 167
Y+SPE G + + D +S GV + E L
Sbjct: 233 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 267
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 94 HRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKRIVGTYGYMSPEYALRGLFSIK 153
HRD+K NIL+ ++ + DFGIA DE + VGT Y +PE + +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASAT-TDEKLTQLGNTVGTLYYXAPERFSESHATYR 215
Query: 154 SDVFSFGVLVLETLSSKKNAHFYNTDSLTLLGHAWN 189
+D+++ ++ E L+ Y D L++ G N
Sbjct: 216 ADIYALTCVLYECLTGSPP---YQGDQLSVXGAHIN 248
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 67/164 (40%), Gaps = 21/164 (12%)
Query: 8 GLEEFKNEMMLIAKLQHRNLVRLFGCCI--EHGEKILIYEYMPNKSLDCFLFDPTKTGLL 65
G K E+ L+ +L+H+N+++L E + ++ EY + P K
Sbjct: 49 GEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEK---- 104
Query: 66 GWEMRVRILEG------VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIAR 119
R + + + GL YLH ++H+D+K N+LL + KIS G+A
Sbjct: 105 ----RFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAE 157
Query: 120 LFGGDELQSNTKRIVGTYGYMSPEYA--LRGLFSIKSDVFSFGV 161
+ G+ + PE A L K D++S GV
Sbjct: 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGV 201
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 56 LFDPTKTGLLGWEMRVRILEGVAQGLLYLH-----HYSRLRVIHRDLKASNILLDSNMNP 110
LFD + E +++ A GL +LH + + HRDLK+ NIL+ N
Sbjct: 89 LFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 148
Query: 111 KISDFGIARLF--GGDELQSNTKRIVGTYGYMSPEY-----ALRGLFSIK-SDVFSFGVL 162
I+D G+A D + VGT YM+PE ++ S K +D+++ G++
Sbjct: 149 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV 208
Query: 163 VLE 165
E
Sbjct: 209 FWE 211
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 56 LFDPTKTGLLGWEMRVRILEGVAQGLLYLH-----HYSRLRVIHRDLKASNILLDSNMNP 110
LFD + E +++ A GL +LH + + HRDLK+ NIL+ N
Sbjct: 88 LFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 147
Query: 111 KISDFGIARLF--GGDELQSNTKRIVGTYGYMSPEY-----ALRGLFSIK-SDVFSFGVL 162
I+D G+A D + VGT YM+PE ++ S K +D+++ G++
Sbjct: 148 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV 207
Query: 163 VLE 165
E
Sbjct: 208 FWE 210
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 56 LFDPTKTGLLGWEMRVRILEGVAQGLLYLH-----HYSRLRVIHRDLKASNILLDSNMNP 110
LFD + E +++ A GL +LH + + HRDLK+ NIL+ N
Sbjct: 114 LFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 173
Query: 111 KISDFGIARLF--GGDELQSNTKRIVGTYGYMSPEY-----ALRGLFSIK-SDVFSFGVL 162
I+D G+A D + VGT YM+PE ++ S K +D+++ G++
Sbjct: 174 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV 233
Query: 163 VLE 165
E
Sbjct: 234 FWE 236
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 56 LFDPTKTGLLGWEMRVRILEGVAQGLLYLH-----HYSRLRVIHRDLKASNILLDSNMNP 110
LFD + E +++ A GL +LH + + HRDLK+ NIL+ N
Sbjct: 91 LFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 150
Query: 111 KISDFGIARLF--GGDELQSNTKRIVGTYGYMSPEY-----ALRGLFSIK-SDVFSFGVL 162
I+D G+A D + VGT YM+PE ++ S K +D+++ G++
Sbjct: 151 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV 210
Query: 163 VLE 165
E
Sbjct: 211 FWE 213
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 56 LFDPTKTGLLGWEMRVRILEGVAQGLLYLH-----HYSRLRVIHRDLKASNILLDSNMNP 110
LFD + E +++ A GL +LH + + HRDLK+ NIL+ N
Sbjct: 94 LFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 153
Query: 111 KISDFGIARLF--GGDELQSNTKRIVGTYGYMSPEY-----ALRGLFSIK-SDVFSFGVL 162
I+D G+A D + VGT YM+PE ++ S K +D+++ G++
Sbjct: 154 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV 213
Query: 163 VLE 165
E
Sbjct: 214 FWE 216
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 56 LFDPTKTGLLGWEMRVRILEGVAQGLLYLH-----HYSRLRVIHRDLKASNILLDSNMNP 110
LFD + E +++ A GL +LH + + HRDLK+ NIL+ N
Sbjct: 127 LFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 186
Query: 111 KISDFGIARLF--GGDELQSNTKRIVGTYGYMSPEY-----ALRGLFSIK-SDVFSFGVL 162
I+D G+A D + VGT YM+PE ++ S K +D+++ G++
Sbjct: 187 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV 246
Query: 163 VLE 165
E
Sbjct: 247 FWE 249
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 18/112 (16%)
Query: 80 GLLYLHHYSRLRVIHRDLKASNILLDSNMNP------KISDFGIARLFGGDELQSNTKRI 133
GL Y+H R +IH D+K N+L++ +P KI+D G A + DE +N+
Sbjct: 143 GLDYMH--RRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY--DEHYTNS--- 195
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK-----KNAHFYNTDS 180
+ T Y SPE L + +D++S L+ E ++ H Y D
Sbjct: 196 IQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 18/112 (16%)
Query: 80 GLLYLHHYSRLRVIHRDLKASNILLDSNMNP------KISDFGIARLFGGDELQSNTKRI 133
GL Y+H R +IH D+K N+L++ +P KI+D G A + DE +N+
Sbjct: 143 GLDYMH--RRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY--DEHYTNS--- 195
Query: 134 VGTYGYMSPEYALRGLFSIKSDVFSFGVLVLETLSSK-----KNAHFYNTDS 180
+ T Y SPE L + +D++S L+ E ++ H Y D
Sbjct: 196 IQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 16/109 (14%)
Query: 73 ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLD--SNMNP-KISDFGIAR--LFGGDELQ 127
+++ VA L +LH+ + HRDLK NIL + + ++P KI DFG+ GD
Sbjct: 116 VVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSP 172
Query: 128 SNTKRIV---GTYGYMSPEYA-----LRGLFSIKSDVFSFGVLVLETLS 168
+T ++ G+ YM+PE ++ + D++S GV++ LS
Sbjct: 173 ISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLS 221
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 11/146 (7%)
Query: 24 HRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRILEGVAQGLLY 83
H ++RL E E ++ P + D F + T+ G LG E R G Q +
Sbjct: 97 HPGVIRLLDW-FETQEGFMLVLERPLPAQDLFDYI-TEKGPLG-EGPSRCFFG--QVVAA 151
Query: 84 LHHYSRLRVIHRDLKASNILLDSNMN-PKISDFGIARLFGGDELQSNTKRIVGTYGYMSP 142
+ H V+HRD+K NIL+D K+ DFG L DE ++ GT Y P
Sbjct: 152 IQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALL-HDEPYTDFD---GTRVYSPP 207
Query: 143 EYALRGLF-SIKSDVFSFGVLVLETL 167
E+ R + ++ + V+S G+L+ + +
Sbjct: 208 EWISRHQYHALPATVWSLGILLYDMV 233
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 77/179 (43%), Gaps = 33/179 (18%)
Query: 10 EEFKN-EMMLIAKLQHRNLVRLFGCCIEHGEKI------LIYEYMPNKSLDCFLFDPTKT 62
+ FKN E+ ++ ++H N+V L +G+K L+ EY+P +T
Sbjct: 76 KRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP------------ET 123
Query: 63 GLLGWEMRVRILEGVAQGLLYLHHYSRLR---------VIHRDLKASNILLDSNMNP-KI 112
++ + + L+ L+ Y LR + HRD+K N+LLD K+
Sbjct: 124 VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKL 183
Query: 113 SDFGIARLFGGDELQSNTKRIVGTYGYMSPEYALRGL-FSIKSDVFSFGVLVLETLSSK 170
DFG A++ E N I Y Y +PE ++ D++S G ++ E + +
Sbjct: 184 IDFGSAKILIAGE--PNVSXICSRY-YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 85/197 (43%), Gaps = 30/197 (15%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVR-I 73
E+ ++ +L H ++V++ I + Y+ + D +T + E+ ++ +
Sbjct: 102 EIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTL 161
Query: 74 LEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLF-----GGDEL-- 126
L + G+ Y+H ++HRDLK +N L++ + + K+ DFG+AR G +L
Sbjct: 162 LYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPI 218
Query: 127 --------------QSNTKRI----VGTYGYMSPEYA-LRGLFSIKSDVFSFGVLVLETL 167
N KR V T Y +PE L+ ++ DV+S G + E L
Sbjct: 219 SPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
Query: 168 SSKKNAHFYNTDSLTLL 184
+ K Y+ D L
Sbjct: 279 NMIKENVAYHADRGPLF 295
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 60/114 (52%), Gaps = 8/114 (7%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYE--YMPNKSLDCFLFDPTKTGLLGWEMRVR 72
E+ ++ +L+ ++RL+ I + +L ++ Y+ + D L KT + E ++
Sbjct: 75 EITILNRLKSDYIIRLYDLII--PDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIK 132
Query: 73 -ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDE 125
IL + G ++H +IHRDLK +N LL+ + + K+ DFG+AR ++
Sbjct: 133 TILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEK 183
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 13/65 (20%)
Query: 54 CFLFDPTKTGLLGWEMRV-----------RILEGVAQGLLYLHHYSRLRVIHRDLKASNI 102
C +F+ LL W ++ +I++ V QGL YLH ++ R+IH D+K NI
Sbjct: 105 CMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH--TKCRIIHTDIKPENI 162
Query: 103 LLDSN 107
LL N
Sbjct: 163 LLSVN 167
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 13/65 (20%)
Query: 54 CFLFDPTKTGLLGWEMRV-----------RILEGVAQGLLYLHHYSRLRVIHRDLKASNI 102
C +F+ LL W ++ +I++ V QGL YLH ++ R+IH D+K NI
Sbjct: 121 CMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH--TKCRIIHTDIKPENI 178
Query: 103 LLDSN 107
LL N
Sbjct: 179 LLSVN 183
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 73 ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDS---NMNPKISDFGIARLFGGDELQSN 129
I++ + + + YLH + + HRD+K N+L S N K++DFG A+ E S+
Sbjct: 127 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSH 178
Query: 130 TKRIVGTYG--YMSPEYALRGLFSIKSDVFSFGVLV 163
Y Y++PE + D++S GV++
Sbjct: 179 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 214
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 73 ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDS---NMNPKISDFGIARLFGGDELQSN 129
I++ + + + YLH + + HRD+K N+L S N K++DFG A+ E S+
Sbjct: 121 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSH 172
Query: 130 TKRIVGTYG--YMSPEYALRGLFSIKSDVFSFGVLV 163
Y Y++PE + D++S GV++
Sbjct: 173 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 208
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 73 ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDS---NMNPKISDFGIARLFGGDELQSN 129
I++ + + + YLH + + HRD+K N+L S N K++DFG A+ E S+
Sbjct: 120 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSH 171
Query: 130 TKRIVGTYG--YMSPEYALRGLFSIKSDVFSFGVLV 163
Y Y++PE + D++S GV++
Sbjct: 172 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 207
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 87/223 (39%), Gaps = 52/223 (23%)
Query: 55 FLFDPTKTGLLGWEMRVRILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISD 114
FL G L + ++I + + ++H + +IHRDLK N+LL + K+ D
Sbjct: 123 FLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR-QKPPIIHRDLKVENLLLSNQGTIKLCD 181
Query: 115 FGIA---------------RLFGGDELQSNTKRIVGTYGYMSPEYA-LRGLFSI--KSDV 156
FG A R +E+ NT T Y +PE L F I K D+
Sbjct: 182 FGSATTISHYPDYSWSAQRRALVEEEITRNT-----TPMYRTPEIIDLYSNFPIGEKQDI 236
Query: 157 FSFGVLVLETLSSKKNAHFYNTDSLTLLGHAWNLWNDGRAWELMD---SILQNDASYPML 213
++ G + L LL + + DG +++ SI +D Y +
Sbjct: 237 WALGCI------------------LYLLCFRQHPFEDGAKLRIVNGKYSIPPHDTQYTVF 278
Query: 214 NRYINVALLCVQENAADRPTMLEVISMLTN----ENVILPSPL 252
+ I L Q N +R ++ EV+ L NV SP+
Sbjct: 279 HSLIRAML---QVNPEERLSIAEVVHQLQEIAAARNVNPKSPI 318
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 73 ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDS---NMNPKISDFGIARLFGGDELQSN 129
I++ + + + YLH + + HRD+K N+L S N K++DFG A+ E S+
Sbjct: 126 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSH 177
Query: 130 TKRIVGTYG--YMSPEYALRGLFSIKSDVFSFGVLV 163
Y Y++PE + D++S GV++
Sbjct: 178 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 213
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 73 ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDS---NMNPKISDFGIARLFGGDELQSN 129
I++ + + + YLH + + HRD+K N+L S N K++DFG A+ E S+
Sbjct: 122 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSH 173
Query: 130 TKRIVGTYG--YMSPEYALRGLFSIKSDVFSFGVLV 163
Y Y++PE + D++S GV++
Sbjct: 174 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 209
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 73 ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDS---NMNPKISDFGIARLFGGDELQSN 129
I++ + + + YLH + + HRD+K N+L S N K++DFG A+ E S+
Sbjct: 128 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSH 179
Query: 130 TKRIVGTYG--YMSPEYALRGLFSIKSDVFSFGVLV 163
Y Y++PE + D++S GV++
Sbjct: 180 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 215
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 73 ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDF--GIARLFGGDE---LQ 127
IL+GV + L Y+HH + +HR +KAS+IL+ + +S ++ + G +
Sbjct: 133 ILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVH 189
Query: 128 SNTKRIVGTYGYMSPEYALRGL--FSIKSDVFSFGVLVLE 165
K V ++SPE + L + KSD++S G+ E
Sbjct: 190 DFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACE 229
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 73 ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDS---NMNPKISDFGIARLFGGDELQSN 129
I++ + + + YLH + + HRD+K N+L S N K++DFG A+ E S+
Sbjct: 166 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSH 217
Query: 130 TKRIVGTYG--YMSPEYALRGLFSIKSDVFSFGVLV 163
Y Y++PE + D++S GV++
Sbjct: 218 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 253
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Query: 77 VAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSNTKR---I 133
+A+ ++ + RL +HRD+K NILLD + +++DFG D T R
Sbjct: 168 LAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRAD----GTVRSLVA 223
Query: 134 VGTYGYMSPE 143
VGT Y+SPE
Sbjct: 224 VGTPDYLSPE 233
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 73 ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDSNMNPKISDF--GIARLFGGDE---LQ 127
IL+GV + L Y+HH + +HR +KAS+IL+ + +S ++ + G +
Sbjct: 117 ILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVH 173
Query: 128 SNTKRIVGTYGYMSPEYALRGL--FSIKSDVFSFGVLVLE 165
K V ++SPE + L + KSD++S G+ E
Sbjct: 174 DFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACE 213
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 73 ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDS---NMNPKISDFGIARLFGGDELQSN 129
I++ + + + YLH + + HRD+K N+L S N K++DFG A+ E S+
Sbjct: 136 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSH 187
Query: 130 TKRIVGTYG--YMSPEYALRGLFSIKSDVFSFGVLV 163
Y Y++PE + D++S GV++
Sbjct: 188 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 223
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 73 ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDS---NMNPKISDFGIARLFGGDELQSN 129
I++ + + + YLH + + HRD+K N+L S N K++DFG A+ E S+
Sbjct: 172 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSH 223
Query: 130 TKRIVGTYG--YMSPEYALRGLFSIKSDVFSFGVLV 163
Y Y++PE + D++S GV++
Sbjct: 224 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 259
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 73 ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDS---NMNPKISDFGIARLFGGDELQSN 129
I++ + + + YLH + + HRD+K N+L S N K++DFG A+ E S+
Sbjct: 122 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSH 173
Query: 130 TKRIVGTYG--YMSPEYALRGLFSIKSDVFSFGVLV 163
Y Y++PE + D++S GV++
Sbjct: 174 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 209
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 80/199 (40%), Gaps = 44/199 (22%)
Query: 7 QGLEEFKNEMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPN----KSLDCFLFDPT-- 60
+ +E K E+ L+ KL H N+ RL+ + L+ E L+ F+ D T
Sbjct: 70 KDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGK 129
Query: 61 ------KTGL---------------------LGWEMRVRILEGVAQGLL-YLHHYSRLRV 92
KT + L + R +++ + + + LH+ +
Sbjct: 130 CAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGI 189
Query: 93 IHRDLKASNILLDSN--MNPKISDFGIARLF----GGDELQSNTKRIVGTYGYMSPEY-- 144
HRD+K N L +N K+ DFG+++ F G+ TK GT +++PE
Sbjct: 190 CHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTK--AGTPYFVAPEVLN 247
Query: 145 ALRGLFSIKSDVFSFGVLV 163
+ K D +S GVL+
Sbjct: 248 TTNESYGPKCDAWSAGVLL 266
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 16/109 (14%)
Query: 73 ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLD--SNMNP-KISDF--GIARLFGGDELQ 127
+++ VA L +LH+ + HRDLK NIL + + ++P KI DF G GD
Sbjct: 116 VVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSP 172
Query: 128 SNTKRIV---GTYGYMSPEYA-----LRGLFSIKSDVFSFGVLVLETLS 168
+T ++ G+ YM+PE ++ + D++S GV++ LS
Sbjct: 173 ISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLS 221
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 73 ILEGVAQGLLYLHHYSRLRVIHRDLKASNILLDS---NMNPKISDFGIARLFGGDELQSN 129
I++ + + + YLH + + HRD+K N+L S N K++DFG A+ E S+
Sbjct: 120 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSH 171
Query: 130 TKRIVGTYG--YMSPEYALRGLFSIKSDVFSFGVLV 163
Y Y++PE + D++S GV++
Sbjct: 172 NSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 207
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 18/134 (13%)
Query: 15 EMMLIAKLQHRNLVRLFGCCIEHGEKILIYEYMPNKSLDCFLFDPTKTGLLGWEMRVRIL 74
E+ ++++++H N++++ G L+ E LD F F + R+
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLVMEKH-GSGLDLFAF---------IDRHPRLD 128
Query: 75 EGVA----QGLLYLHHYSRLR-VIHRDLKASNILLDSNMNPKISDFGIARLFGGDELQSN 129
E +A + L+ Y RL+ +IHRD+K NI++ + K+ DFG A +L
Sbjct: 129 EPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT 188
Query: 130 TKRIVGTYGYMSPE 143
GT Y +PE
Sbjct: 189 ---FCGTIEYCAPE 199
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.136 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,370,844
Number of Sequences: 62578
Number of extensions: 331332
Number of successful extensions: 2891
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 166
Number of HSP's that attempted gapping in prelim test: 770
Number of HSP's gapped (non-prelim): 1167
length of query: 289
length of database: 14,973,337
effective HSP length: 98
effective length of query: 191
effective length of database: 8,840,693
effective search space: 1688572363
effective search space used: 1688572363
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)