Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>038652
MIRALGTSVAESSNFIRKSGNFRRLTKDEIRAKIAKVLLNAVMGLTLPKTFNVLGFVGEH
KVTIVIDSGASPNFISAEQVDELKLPISEAEAYGVILGTGKSKKTQGVCRNYKWLETLGV
THINWKTRVMKFTFGKSQIVLQGDPSIQKMLISLNAIVRAIRHEGHGYWVEMQG

High Scoring Gene Products

No gene products matching your query constraints were returned by the BLAST search.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  038652
        (174 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2091793 - symbol:AT3G29750 species:3702 "Arabi...   133  4.3e-08   1
TAIR|locus:2089696 - symbol:AT3G30770 species:3702 "Arabi...   126  1.3e-06   1


>TAIR|locus:2091793 [details] [associations]
            symbol:AT3G29750 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004812
            "aminoacyl-tRNA ligase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0006418 "tRNA aminoacylation for protein translation"
            evidence=IEA] InterPro:IPR018150 GO:GO:0005524 GO:GO:0005737
            EMBL:CP002686 GO:GO:0006508 GO:GO:0008233 GO:GO:0006418
            InterPro:IPR021109 SUPFAM:SSF50630 GO:GO:0004812 PANTHER:PTHR22594
            InterPro:IPR013242 Pfam:PF08284 IPI:IPI00544562 RefSeq:NP_189618.1
            UniGene:At.53581 ProteinModelPortal:F4J487
            EnsemblPlants:AT3G29750.1 GeneID:822661 KEGG:ath:AT3G29750
            PhylomeDB:F4J487 ArrayExpress:F4J487 Uniprot:F4J487
        Length = 421

 Score = 133 (51.9 bits), Expect = 4.3e-08, P = 4.3e-08
 Identities = 30/81 (37%), Positives = 44/81 (54%)

Query:    42 VMGLTLPKTFNVLGFVGEHKVTIVIDSGASPNFISAEQVDELKLPISEAEAYGVILGTGK 101
             V+ LT  K     GF+ +HKV + IDSGA+ NFI  E    LKLP S      V+LG  +
Sbjct:   115 VIDLTRNKGMRFYGFILDHKVVVAIDSGATDNFILVELAFSLKLPTSITNQASVLLGQRQ 174

Query:   102 SKKTQGVCRNYK-WLETLGVT 121
               ++ G C   + W++ + +T
Sbjct:   175 CIQSVGTCLGIRLWVQEVEIT 195


>TAIR|locus:2089696 [details] [associations]
            symbol:AT3G30770 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004812
            "aminoacyl-tRNA ligase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0006418 "tRNA aminoacylation for protein translation"
            evidence=IEA] InterPro:IPR018150 GO:GO:0005524 GO:GO:0005737
            EMBL:CP002686 GO:GO:0006508 GO:GO:0008233 GO:GO:0006418
            GO:GO:0004812 PANTHER:PTHR22594 InterPro:IPR013242 Pfam:PF08284
            IPI:IPI00538539 RefSeq:NP_189700.4 UniGene:At.53604
            ProteinModelPortal:F4J7U9 EnsemblPlants:AT3G30770.1 GeneID:822832
            KEGG:ath:AT3G30770 Uniprot:F4J7U9
        Length = 603

 Score = 126 (49.4 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 41/125 (32%), Positives = 58/125 (46%)

Query:    34 IAKVLLNAVMGLTLPKTFNVLGFVGEHKVTIVIDSGASPNFISAEQVDELKLPISEAEAY 93
             I +V   +    T  K     GF+  HKV +VIDSGA+ NFIS E    LKLP S     
Sbjct:   267 IRQVKRQSTTEFTKGKDMRFYGFISCHKVVVVIDSGATNNFISDELALVLKLPTSTTNQA 326

Query:    94 GVILGTGKSKKTQGVCRNYKWLETLGVTHINWKTRVMKFTFGKSQIVLQ--GDPSIQKM- 150
              V+LG  +  +T G C     L  +    IN    ++  T     ++L   G  ++++  
Sbjct:   327 SVLLGQRQCIQTIGTCFGINLL--VQEVEINENFLLLDLTKTDVDVILGYGGSQNLERQW 384

Query:   151 LISLN 155
             LI LN
Sbjct:   385 LIWLN 389


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.135   0.391    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      174       174   0.00075  109 3  11 22  0.40    32
                                                     31  0.49    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  593 (63 KB)
  Total size of DFA:  148 KB (2090 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.29u 0.09s 15.38t   Elapsed:  00:00:00
  Total cpu time:  15.29u 0.09s 15.38t   Elapsed:  00:00:00
  Start:  Mon May 20 19:38:28 2013   End:  Mon May 20 19:38:28 2013

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