Query 038652
Match_columns 174
No_of_seqs 132 out of 335
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 23:10:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038652.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038652hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s8i_A Protein DDI1 homolog 1; 99.6 5.4E-16 1.9E-20 120.4 5.4 99 45-144 19-144 (148)
2 2i1a_A DNA damage-inducible pr 99.3 3.2E-12 1.1E-16 97.4 5.8 96 46-144 22-143 (148)
3 3slz_A GAG-Pro-POL polyprotein 96.8 0.00088 3E-08 50.8 3.6 54 43-102 15-68 (132)
4 1fmb_A EIAV protease; hydrolas 96.7 0.0012 4.1E-08 48.1 3.4 54 51-105 9-62 (104)
5 3ec0_A Protease; HIV-2, inhibi 94.5 0.077 2.6E-06 38.2 5.8 48 52-106 10-57 (99)
6 2hs1_A HIV-1 protease; ultra-h 94.1 0.19 6.4E-06 36.1 7.0 47 52-105 10-56 (99)
7 3ka2_A [L-Ala51;Gly51']HIV-1 p 90.7 1.7 5.7E-05 35.0 9.2 45 52-103 10-54 (203)
8 2hah_A Protease, retropepsin; 85.9 0.68 2.3E-05 34.0 3.6 27 49-77 14-40 (116)
9 3sqf_A Protease; folded monome 81.0 1.5 5E-05 32.2 3.6 26 52-77 11-36 (114)
10 2rsp_A RSV protease; hydrolase 76.8 1.4 4.9E-05 32.7 2.5 21 57-77 27-47 (124)
11 3ka2_A [L-Ala51;Gly51']HIV-1 p 68.5 5.1 0.00017 32.1 4.1 47 52-105 114-160 (203)
12 1lya_A Cathepsin D; lysosomal 65.5 6.5 0.00022 27.1 3.7 29 50-78 14-44 (97)
13 1lya_B Cathepsin D; lysosomal 49.1 16 0.00055 28.3 3.9 35 50-84 102-143 (241)
14 3cms_A Chymosin B; hydrolase, 47.8 25 0.00086 28.6 5.0 35 50-84 192-233 (323)
15 3liy_A Protease; hydrolase, hy 47.5 14 0.00046 27.2 2.9 24 53-76 13-41 (116)
16 2apr_A Rhizopuspepsin; hydrola 46.3 20 0.00069 29.3 4.2 24 62-85 213-240 (325)
17 1mpp_A Pepsin; hydrolase(acid 44.1 29 0.001 28.6 4.9 34 51-84 213-254 (361)
18 1dpj_A Proteinase A; proteinas 43.7 32 0.0011 28.0 5.0 35 50-84 195-235 (329)
19 2qzx_A Candidapepsin-5; aspart 43.0 33 0.0011 28.0 5.1 34 50-83 196-234 (342)
20 3fv3_A SAPP1P-secreted asparti 42.9 25 0.00087 28.6 4.3 35 50-84 198-237 (339)
21 3pvk_A Candidapepsin-2; hydrol 42.8 34 0.0012 27.8 5.1 35 50-84 195-235 (342)
22 1bxo_A Protein (penicillopepsi 42.4 21 0.00072 29.1 3.7 29 50-78 16-44 (323)
23 1izd_A Aspartic proteinase; su 42.2 21 0.00072 29.2 3.7 29 50-78 16-44 (323)
24 3aup_A SBG7S, BG, basic 7S glo 42.1 22 0.00075 30.1 3.9 21 64-84 262-282 (403)
25 1yg9_A Aspartic protease BLA G 40.8 23 0.00078 29.0 3.7 27 52-78 20-46 (330)
26 4aa9_A Chymosin; hydrolase, as 40.3 29 0.001 28.0 4.2 35 50-84 189-230 (320)
27 1j71_A Candidapepsin, aspartic 39.9 40 0.0014 27.5 5.1 34 50-83 196-234 (334)
28 1mpp_A Pepsin; hydrolase(acid 39.6 64 0.0022 26.5 6.4 30 49-78 18-49 (361)
29 1b5f_A Protein (cardosin A); h 39.5 20 0.00069 28.0 3.1 28 56-83 198-232 (239)
30 1ibq_A Aspergillopepsin; aspar 39.4 23 0.00078 28.9 3.5 29 50-78 15-43 (325)
31 1tzs_A Cathepsin E; hydrolase, 39.3 40 0.0014 27.7 5.1 33 51-83 205-244 (351)
32 1htr_B Gastricsin; aspartyl pr 37.6 20 0.00067 29.3 2.8 34 51-84 193-234 (329)
33 2apr_A Rhizopuspepsin; hydrola 37.3 30 0.001 28.2 3.8 30 49-78 15-46 (325)
34 1b5f_A Protein (cardosin A); h 37.2 30 0.001 27.0 3.7 28 50-77 14-43 (239)
35 1wkr_A Polyporopepsin; hydrola 35.0 34 0.0011 28.0 3.8 28 50-77 13-42 (340)
36 1am5_A Pepsin, acid proteinase 34.4 34 0.0011 27.8 3.7 29 56-84 198-231 (324)
37 1t6e_X Xylanase inhibitor; two 34.1 26 0.00091 29.3 3.1 33 51-83 208-251 (381)
38 1oew_A Endothiapepsin; hydrola 33.8 35 0.0012 27.9 3.7 29 50-78 16-46 (329)
39 1bxo_A Protein (penicillopepsi 33.2 17 0.00057 29.7 1.7 25 60-84 206-230 (323)
40 1izd_A Aspartic proteinase; su 32.9 17 0.0006 29.7 1.7 25 60-84 207-231 (323)
41 2qzx_A Candidapepsin-5; aspart 32.8 37 0.0013 27.8 3.7 27 50-76 13-41 (342)
42 3fv3_A SAPP1P-secreted asparti 32.6 37 0.0013 27.6 3.7 28 50-77 13-42 (339)
43 3c9x_A Trichoderma reesei aspa 32.4 38 0.0013 27.6 3.7 29 50-78 16-46 (329)
44 1dpj_A Proteinase A; proteinas 32.3 38 0.0013 27.5 3.7 28 50-77 14-43 (329)
45 2k4v_A Uncharacterized protein 32.1 90 0.0031 23.0 5.3 42 50-91 42-87 (125)
46 1j71_A Candidapepsin, aspartic 31.7 39 0.0013 27.5 3.7 27 50-76 13-41 (334)
47 1wkr_A Polyporopepsin; hydrola 31.5 38 0.0013 27.7 3.6 28 56-83 196-228 (340)
48 2k57_A Putative lipoprotein; s 30.6 1.1E+02 0.0038 19.7 5.0 43 91-145 3-46 (61)
49 4aa9_A Chymosin; hydrolase, as 30.1 44 0.0015 26.9 3.7 27 51-77 13-41 (320)
50 2qp8_A Beta-secretase 1; BACE1 30.0 42 0.0015 28.0 3.7 28 50-77 22-51 (395)
51 3pvk_A Candidapepsin-2; hydrol 29.7 44 0.0015 27.1 3.7 27 50-76 13-41 (342)
52 1wh3_A 59 kDa 2'-5'-oligoadeny 29.2 88 0.003 20.0 4.5 46 44-89 1-47 (87)
53 2dzi_A Ubiquitin-like protein 28.6 57 0.002 20.4 3.4 45 45-89 2-47 (81)
54 2ewy_A Beta-secretase 2; BACE2 28.4 69 0.0023 26.5 4.7 28 50-77 14-43 (383)
55 1tzs_A Cathepsin E; hydrolase, 27.5 51 0.0017 27.1 3.7 28 51-78 25-54 (351)
56 1wgg_A Ubiquitin carboxyl-term 27.3 1.3E+02 0.0046 20.1 5.4 46 45-90 2-48 (96)
57 3v6c_B Ubiquitin; structural g 27.3 60 0.0021 21.3 3.5 50 41-90 8-58 (91)
58 3cms_A Chymosin B; hydrolase, 27.3 52 0.0018 26.6 3.7 28 50-77 15-44 (323)
59 1am5_A Pepsin, acid proteinase 27.3 52 0.0018 26.6 3.7 29 50-78 13-43 (324)
60 3vf3_A Beta-secretase 1; struc 27.2 74 0.0025 26.5 4.7 29 49-77 28-58 (402)
61 1htr_B Gastricsin; aspartyl pr 27.0 53 0.0018 26.6 3.7 28 50-77 13-42 (329)
62 3aup_A SBG7S, BG, basic 7S glo 27.0 67 0.0023 26.9 4.5 29 49-77 21-51 (403)
63 1miq_A Plasmepsin; aspartic pr 26.4 80 0.0027 26.4 4.8 35 50-84 242-279 (375)
64 2jn0_A Hypothetical lipoprotei 26.3 1.3E+02 0.0046 19.3 4.9 42 91-144 3-45 (61)
65 3qvc_A Histo-aspartic protease 26.0 78 0.0027 27.5 4.8 35 50-84 317-354 (451)
66 2rb6_A Uncharacterized protein 25.9 1.4E+02 0.0047 19.3 5.3 42 91-144 3-45 (61)
67 3l7o_A Ribose-5-phosphate isom 24.8 26 0.0009 28.2 1.4 20 63-82 21-40 (225)
68 1ibq_A Aspergillopepsin; aspar 24.8 32 0.0011 28.1 1.9 26 61-86 208-233 (325)
69 3bdu_A Putative lipoprotein; X 24.7 1.1E+02 0.0037 19.8 4.1 42 91-144 3-45 (62)
70 3k1w_A Renin; protease, altern 24.5 33 0.0011 27.9 2.0 34 51-84 203-243 (341)
71 3k1w_A Renin; protease, altern 24.5 63 0.0022 26.2 3.7 28 50-77 19-48 (341)
72 2d10_E Ezrin-radixin-moesin bi 24.4 11 0.00036 20.9 -0.7 11 108-118 12-22 (28)
73 1yg9_A Aspartic protease BLA G 24.3 30 0.001 28.3 1.7 34 51-84 197-236 (330)
74 2rd1_A Putative outer membrane 23.9 1.5E+02 0.0052 19.1 5.3 42 91-144 3-45 (62)
75 1vd2_A Protein kinase C, IOTA 23.8 1.4E+02 0.0049 20.4 4.9 40 47-86 3-42 (89)
76 3c9x_A Trichoderma reesei aspa 23.5 35 0.0012 27.8 1.9 24 61-84 213-236 (329)
77 2ewy_A Beta-secretase 2; BACE2 23.3 32 0.0011 28.5 1.7 21 63-83 222-242 (383)
78 2x0b_A Renin; hydrolase-hormon 23.2 67 0.0023 27.1 3.7 29 50-78 62-92 (383)
79 2d11_E Na(+)/H(+) exchange reg 23.1 12 0.0004 20.8 -0.7 12 107-118 11-22 (28)
80 3lpj_A Beta-secretase 1; alzhe 22.8 67 0.0023 27.5 3.7 28 50-77 75-104 (455)
81 2bju_A Plasmepsin II; aspartic 22.8 67 0.0023 28.0 3.7 30 49-78 138-169 (453)
82 1oew_A Endothiapepsin; hydrola 22.7 53 0.0018 26.7 2.9 24 61-84 212-235 (329)
83 3qvc_A Histo-aspartic protease 22.3 64 0.0022 28.1 3.5 28 51-78 139-168 (451)
84 3lpj_A Beta-secretase 1; alzhe 22.1 41 0.0014 28.8 2.2 33 51-83 263-306 (455)
85 1v5t_A 8430435I17RIK protein; 21.5 63 0.0022 21.3 2.6 45 46-90 3-48 (90)
86 3vf3_A Beta-secretase 1; struc 20.9 38 0.0013 28.3 1.7 34 50-83 216-260 (402)
87 2qp8_A Beta-secretase 1; BACE1 20.7 39 0.0013 28.3 1.7 33 51-83 210-253 (395)
88 1o8b_A Ribose 5-phosphate isom 20.4 32 0.0011 27.4 1.1 20 63-82 23-42 (219)
No 1
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=99.60 E-value=5.4e-16 Score=120.39 Aligned_cols=99 Identities=13% Similarity=0.088 Sum_probs=72.0
Q ss_pred CCCCCeEEEEEEECCEEEEEEeecCCCCccccHHHHhhcCCcccccceeEEEecC------------------CCeeeee
Q 038652 45 LTLPKTFNVLGFVGEHKVTIVIDSGASPNFISAEQVDELKLPISEAEAYGVILGT------------------GKSKKTQ 106 (174)
Q Consensus 45 ~~~~~tmrl~g~I~~~~v~~LIDSGSThnFIs~~~v~~l~l~~~~~~p~~V~van------------------G~~l~~~ 106 (174)
......+.+.+.|||+++.+||||||++||||+++|+|+||+.....++...+.. +..+.|+
T Consensus 19 ~~~~~~l~v~~~Ing~~v~~LVDTGAs~s~Is~~~A~rlGL~~~~~~~~~~~a~g~G~~~~~g~v~~~~I~Ig~~~~~~~ 98 (148)
T 3s8i_A 19 SGQVTMLYINCKVNGHPLKAFVDSGAQMTIMSQACAERCNIMRLVDRRWAGVAKGVGTQRIIGRVHLAQIQIEGDFLQCS 98 (148)
T ss_dssp ---CCCCEEEEEETTEEEEEEECTTCSSCEEEHHHHHHTTCGGGEEGGGCEECCC---CEEEEEEEEEEEEETTEEEEEE
T ss_pred ccccCEEEEEEEECCEEEEEEEeCCCCcEeeCHHHHHHcCCccccCcceeEEEEcCCccEEEEEEEEEEEEECCEEEEEE
Confidence 4467789999999999999999999999999999999999975422112222111 1122222
Q ss_pred e---------eEeCeeeecccCceEEEeeeeEEEEEeCCeEEEEecC
Q 038652 107 G---------VCRNYKWLETLGVTHINWKTRVMKFTFGKSQIVLQGD 144 (174)
Q Consensus 107 ~---------~c~~mdWL~~~gp~~iDw~~~t~~f~~~g~~V~L~G~ 144 (174)
. .+.+||||.+++. .|||++++|.|...++.|.+-..
T Consensus 99 ~~Vle~~~~d~LLGmD~L~~~~~-~ID~~~~~L~l~~~~~~~pfl~~ 144 (148)
T 3s8i_A 99 FSILEDQPMDMLLGLDMLRRHQC-SIDLKKNVLVIGTTGTQTYFLPE 144 (148)
T ss_dssp EEEETTCSSSEEECHHHHHHTTC-EEETTTTEEECTTTCCEEECCCG
T ss_pred EEEeCCCCcCeeccHHHHHhCCE-EEEcCCCEEEEccCCeEEeecCc
Confidence 2 1333999999996 89999999999877777776554
No 2
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=99.28 E-value=3.2e-12 Score=97.40 Aligned_cols=96 Identities=13% Similarity=0.100 Sum_probs=68.4
Q ss_pred CCCCeEEEEEEECCEEEEEEeecCCCCccccHHHHhhcCCcccccceeE-EEecC-----------------CCeeeeee
Q 038652 46 TLPKTFNVLGFVGEHKVTIVIDSGASPNFISAEQVDELKLPISEAEAYG-VILGT-----------------GKSKKTQG 107 (174)
Q Consensus 46 ~~~~tmrl~g~I~~~~v~~LIDSGSThnFIs~~~v~~l~l~~~~~~p~~-V~van-----------------G~~l~~~~ 107 (174)
...+.+.+.+.|+|+++.+|||||||++||++++|++++++......+. ...+. |....+..
T Consensus 22 ~~~~~~~v~v~InG~~~~~LvDTGAs~s~is~~~a~~lgl~~~~~~~~~~~a~g~g~~~~~~~~~~~~i~ig~~~~~~~~ 101 (148)
T 2i1a_A 22 TQVPMLYINIEINNYPVKAFVDTGAQTTIMSTRLAKKTGLSRMIDKRFIGEARGVGTGKIIGRIHQAQVKIETQYIPCSF 101 (148)
T ss_dssp -CCCCCEEEEEETTEEEEEEECTTCSSCEEEHHHHHHHTGGGGCBCCCC-----------CEEEEEEEEEETTEEEEEEE
T ss_pred cccceEEEEEEECCEEEEEEEECCCCccccCHHHHHHcCCCccCCcceEEEEecCCCcccccEEEEEEEEECCEEeceeE
Confidence 3578899999999999999999999999999999999999754332222 11111 11111111
Q ss_pred --------eEeCeeeecccCceEEEeeeeEEEEEeCCeEEEEecC
Q 038652 108 --------VCRNYKWLETLGVTHINWKTRVMKFTFGKSQIVLQGD 144 (174)
Q Consensus 108 --------~c~~mdWL~~~gp~~iDw~~~t~~f~~~g~~V~L~G~ 144 (174)
...+||||++++. .|||.+++|.|. ++.+.+...
T Consensus 102 ~vl~~~~d~iLG~d~L~~~~~-~ID~~~~~l~l~--~~~~~f~~~ 143 (148)
T 2i1a_A 102 TVLDTDIDVLIGLDMLKRHLA-CVDLKENVLRIA--EVETSFLSE 143 (148)
T ss_dssp EEECSSCSEEECHHHHHHTTC-EEETTTTEEEET--TEEEECCCT
T ss_pred EEecCCCCeEecHHHHhhCCE-EEECCCCEEEEc--cEEEecCCh
Confidence 2333999999987 999999999986 466666544
No 3
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=96.78 E-value=0.00088 Score=50.82 Aligned_cols=54 Identities=24% Similarity=0.308 Sum_probs=37.9
Q ss_pred cCCCCCCeEEEEEEECCEEEEEEeecCCCCccccHHHHhhcCCcccccceeEEEecCCCe
Q 038652 43 MGLTLPKTFNVLGFVGEHKVTIVIDSGASPNFISAEQVDELKLPISEAEAYGVILGTGKS 102 (174)
Q Consensus 43 ~G~~~~~tmrl~g~I~~~~v~~LIDSGSThnFIs~~~v~~l~l~~~~~~p~~V~vanG~~ 102 (174)
.|..+.+--.+..+|+|+++.+|+|+||+.+-++..-+ +. .-+|..|.-++|..
T Consensus 15 ~~~d~~~RP~v~i~I~G~~~~~LlDTGAd~tVl~~~~~-----p~-~~~p~~I~GiGG~i 68 (132)
T 3slz_A 15 QGQEPPPEPRITLKVGGQPVTFLVDTGAQHSVLTQNPG-----PL-SDKSAWVQGATGGK 68 (132)
T ss_dssp ---CCCCSSEEEEEETTEEEEEEECTTCSSCEECSCCC-----SE-EEEEEEEECSSCEE
T ss_pred cCCCccCCCEEEEEECCEEEEEEEeCCCCeEEEccccC-----CC-CCCceEEEccCCEE
Confidence 55666667778899999999999999999999986533 32 12455666666643
No 4
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=96.66 E-value=0.0012 Score=48.06 Aligned_cols=54 Identities=17% Similarity=0.316 Sum_probs=41.7
Q ss_pred EEEEEEECCEEEEEEeecCCCCccccHHHHhhcCCcccccceeEEEecCCCeeee
Q 038652 51 FNVLGFVGEHKVTIVIDSGASPNFISAEQVDELKLPISEAEAYGVILGTGKSKKT 105 (174)
Q Consensus 51 mrl~g~I~~~~v~~LIDSGSThnFIs~~~v~~l~l~~~~~~p~~V~vanG~~l~~ 105 (174)
..+..+|+|++..+|+|+||-.+.++.+...++++|..+-+| ....+.|+.+..
T Consensus 9 P~v~v~I~Gq~~e~LLDTGAD~TVl~~~~w~~i~lp~~~w~p-~~i~GiGG~i~v 62 (104)
T 1fmb_A 9 PTTIVLINDTPLNVLLDTGADTSVLTTAHYNRLKYRGRKYQG-TGIGGVGGNVET 62 (104)
T ss_dssp CEEEEEETTEEEEEEECTTCSSCEEEHHHHHHCSSCCCCEEC-CCEEETTEEECC
T ss_pred CEEEEEECCEEEEEEeccCCCcEEEccccCcccCCCCccCCc-cEEEeCCCeEEe
Confidence 356789999999999999999999999999999998772233 334555655443
No 5
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=94.54 E-value=0.077 Score=38.22 Aligned_cols=48 Identities=19% Similarity=0.378 Sum_probs=34.3
Q ss_pred EEEEEECCEEEEEEeecCCCCccccHHHHhhcCCcccccceeEEEecCCCeeeee
Q 038652 52 NVLGFVGEHKVTIVIDSGASPNFISAEQVDELKLPISEAEAYGVILGTGKSKKTQ 106 (174)
Q Consensus 52 rl~g~I~~~~v~~LIDSGSThnFIs~~~v~~l~l~~~~~~p~~V~vanG~~l~~~ 106 (174)
.+..+|+|+++.+|+|+||.++-++ ...+|-.-. | ++..+.|+.+...
T Consensus 10 ~vti~I~Gq~~e~LLDTGAD~TVl~-----~~~~Pg~w~-p-k~igGiGG~i~v~ 57 (99)
T 3ec0_A 10 VVTAYIEGQPVEVLLDTGADDSIVA-----GIELGNNYS-P-KIVGGIGGFINTK 57 (99)
T ss_dssp EEEEEETTEEEEEEECTTCSSCEES-----SCCCCSCCE-E-EEEEETTEEEEEE
T ss_pred eEEEEECCEEEEEEEecCCCceEEc-----CcccCCCCC-c-eEEEecCCcEeee
Confidence 4668899999999999999999995 344443322 2 2566778766543
No 6
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=94.10 E-value=0.19 Score=36.10 Aligned_cols=47 Identities=26% Similarity=0.266 Sum_probs=33.5
Q ss_pred EEEEEECCEEEEEEeecCCCCccccHHHHhhcCCcccccceeEEEecCCCeeee
Q 038652 52 NVLGFVGEHKVTIVIDSGASPNFISAEQVDELKLPISEAEAYGVILGTGKSKKT 105 (174)
Q Consensus 52 rl~g~I~~~~v~~LIDSGSThnFIs~~~v~~l~l~~~~~~p~~V~vanG~~l~~ 105 (174)
.+..+|+|+...+|+|+||-++.++. ..+|-.-. | ....+.|+.+..
T Consensus 10 ~vtvkI~Gq~~eaLLDTGAD~TVl~~-----~~~p~~wk-p-k~igGiGG~i~v 56 (99)
T 2hs1_A 10 LVTIKIGGQLKEALLDTGADDTIIEE-----MSLPGRWK-P-KMIGGIGGFIKV 56 (99)
T ss_dssp EEEEEETTEEEEEEECTTCSSEEESC-----CSSCCCCE-E-EEEEETTEEEEE
T ss_pred EEEEEECCEEEEEEeccCCCcEEEec-----ccCCCCCC-C-cEEEeCCCcEee
Confidence 46688999999999999999999974 34443322 2 345666766544
No 7
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=90.73 E-value=1.7 Score=34.98 Aligned_cols=45 Identities=27% Similarity=0.256 Sum_probs=31.8
Q ss_pred EEEEEECCEEEEEEeecCCCCccccHHHHhhcCCcccccceeEEEecCCCee
Q 038652 52 NVLGFVGEHKVTIVIDSGASPNFISAEQVDELKLPISEAEAYGVILGTGKSK 103 (174)
Q Consensus 52 rl~g~I~~~~v~~LIDSGSThnFIs~~~v~~l~l~~~~~~p~~V~vanG~~l 103 (174)
.+..+|+|++..+|+|+||.++-+. ++++|-.- .|. +..+-|+.+
T Consensus 10 ~vtv~I~Gq~~e~LLDTGAD~TVl~-----~~~lpg~w-~pk-~igGIGG~i 54 (203)
T 3ka2_A 10 LVTIRIGGQLKEALLDTGADDTVIE-----ELNLPGXW-KPK-LIGGIAGFI 54 (203)
T ss_dssp EEEEEETTEEEEEEECTTCSSCEEC-----SCCCSSCE-EEE-EEEETTEEE
T ss_pred eEEEEECCEEEEEEEecCCCceEEe-----cccCCCCC-Cce-EEEEccCcE
Confidence 5678999999999999999999997 45665432 222 334555443
No 8
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=85.95 E-value=0.68 Score=34.02 Aligned_cols=27 Identities=19% Similarity=0.317 Sum_probs=23.8
Q ss_pred CeEEEEEEECCEEEEEEeecCCCCccccH
Q 038652 49 KTFNVLGFVGEHKVTIVIDSGASPNFISA 77 (174)
Q Consensus 49 ~tmrl~g~I~~~~v~~LIDSGSThnFIs~ 77 (174)
+.+. .+|+|+++.+|+|+||-++.|+.
T Consensus 14 rP~v--ikI~Gq~~eaLLDTGAD~TVi~~ 40 (116)
T 2hah_A 14 PEIL--IFVNGYPIKFLLDTGADITVLNR 40 (116)
T ss_dssp CEEE--EEETTEEEEEEECTTCSSCEEEG
T ss_pred CCEE--EEECCEEEEEEecCCCCcEEEcc
Confidence 4444 89999999999999999999985
No 9
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=80.99 E-value=1.5 Score=32.24 Aligned_cols=26 Identities=19% Similarity=0.310 Sum_probs=22.7
Q ss_pred EEEEEECCEEEEEEeecCCCCccccH
Q 038652 52 NVLGFVGEHKVTIVIDSGASPNFISA 77 (174)
Q Consensus 52 rl~g~I~~~~v~~LIDSGSThnFIs~ 77 (174)
.+..+|+|+++.+|+|+||-.+-|..
T Consensus 11 ~vti~I~Gq~~eaLLDTGADdTVi~~ 36 (114)
T 3sqf_A 11 SLTLWLDDKMFTGLINTGADVTIIKL 36 (114)
T ss_dssp EEEEEETTEEEEEEECTTCSSCEEEG
T ss_pred eEEEEECCEEEEEEEccCCCceEEec
Confidence 35588999999999999999998863
No 10
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=76.79 E-value=1.4 Score=32.69 Aligned_cols=21 Identities=33% Similarity=0.390 Sum_probs=19.5
Q ss_pred ECCEEEEEEeecCCCCccccH
Q 038652 57 VGEHKVTIVIDSGASPNFISA 77 (174)
Q Consensus 57 I~~~~v~~LIDSGSThnFIs~ 77 (174)
|+|+...+|+|+||-++.+..
T Consensus 27 i~gq~~eaLLDTGAD~TVl~~ 47 (124)
T 2rsp_A 27 QRSVYITALLDSGADITIISE 47 (124)
T ss_dssp CSEEEEEEEECTTCSSCEEET
T ss_pred CCCEEEEEEecCCCCcEEEec
Confidence 899999999999999999974
No 11
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=68.51 E-value=5.1 Score=32.08 Aligned_cols=47 Identities=30% Similarity=0.311 Sum_probs=32.6
Q ss_pred EEEEEECCEEEEEEeecCCCCccccHHHHhhcCCcccccceeEEEecCCCeeee
Q 038652 52 NVLGFVGEHKVTIVIDSGASPNFISAEQVDELKLPISEAEAYGVILGTGKSKKT 105 (174)
Q Consensus 52 rl~g~I~~~~v~~LIDSGSThnFIs~~~v~~l~l~~~~~~p~~V~vanG~~l~~ 105 (174)
.+..+|+|+++.+|+|+||.++-+. ..++|-.- +|. ..-+-|+.+..
T Consensus 114 ~~~iki~Gq~~e~LlDTGAD~TVl~-----~~~lpg~w-~pk-~igGiGg~i~v 160 (203)
T 3ka2_A 114 LVTIRIGGQLKEALLDTGADDTVIE-----ELNLPGXW-KPK-LIGGIGGFIKV 160 (203)
T ss_dssp EEEEEETTEEEEEEECTTCSSCEEC-----SCCCCSCC-EEE-EEEETTEEEEE
T ss_pred cEEEEECCEEEeeeecccCCceeee-----cccCCCCC-Cce-EEeeccceEEE
Confidence 4678999999999999999999994 44554332 222 34556665543
No 12
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=65.48 E-value=6.5 Score=27.13 Aligned_cols=29 Identities=21% Similarity=0.269 Sum_probs=23.4
Q ss_pred eEEEEEEEC--CEEEEEEeecCCCCccccHH
Q 038652 50 TFNVLGFVG--EHKVTIVIDSGASPNFISAE 78 (174)
Q Consensus 50 tmrl~g~I~--~~~v~~LIDSGSThnFIs~~ 78 (174)
.......|+ .+++.++||+||+.-++...
T Consensus 14 ~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 14 QYYGEIGIGTPPQCFTVVFDTGSSNLWVPSI 44 (97)
T ss_dssp EEEEEEEETTTTEEEEEEEETTCCCEEEEBT
T ss_pred eEEEEEEECCCCeEEEEEEeCCCCceEEeEc
Confidence 455566777 89999999999999998643
No 13
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=49.14 E-value=16 Score=28.32 Aligned_cols=35 Identities=20% Similarity=0.229 Sum_probs=25.7
Q ss_pred eEEEEE-EECCEE------EEEEeecCCCCccccHHHHhhcC
Q 038652 50 TFNVLG-FVGEHK------VTIVIDSGASPNFISAEQVDELK 84 (174)
Q Consensus 50 tmrl~g-~I~~~~------v~~LIDSGSThnFIs~~~v~~l~ 84 (174)
.+.+.+ .|+++. ..++||||+|..++.++.++++.
T Consensus 102 ~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~ 143 (241)
T 1lya_B 102 QVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVDEVRELQ 143 (241)
T ss_dssp EEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHHHHHHHH
T ss_pred EEEEeEEEECCeeEeccCCCEEEEECCCccccCCHHHHHHHH
Confidence 344443 455544 47899999999999999888763
No 14
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=47.79 E-value=25 Score=28.59 Aligned_cols=35 Identities=17% Similarity=0.260 Sum_probs=26.5
Q ss_pred eEEEEE-EECCEEE------EEEeecCCCCccccHHHHhhcC
Q 038652 50 TFNVLG-FVGEHKV------TIVIDSGASPNFISAEQVDELK 84 (174)
Q Consensus 50 tmrl~g-~I~~~~v------~~LIDSGSThnFIs~~~v~~l~ 84 (174)
.+.+.+ .|+++.+ .++||||+|..++.+++++++.
T Consensus 192 ~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~ 233 (323)
T 3cms_A 192 QFTVDSVTISGVVVACEGGCQAILDTGTSKLVGPSSDILNIQ 233 (323)
T ss_dssp EEEEEEEEETTEEEESTTCEEEEECTTCCSEEECHHHHHHHH
T ss_pred EEEEeeEEECCEEeecCCCcEEEEecCCccEeCCHHHHHHHH
Confidence 355554 5677654 6899999999999998887663
No 15
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=47.54 E-value=14 Score=27.16 Aligned_cols=24 Identities=21% Similarity=0.386 Sum_probs=20.8
Q ss_pred EEEEEC-----CEEEEEEeecCCCCcccc
Q 038652 53 VLGFVG-----EHKVTIVIDSGASPNFIS 76 (174)
Q Consensus 53 l~g~I~-----~~~v~~LIDSGSThnFIs 76 (174)
+..+|+ |+...+|+|+||-..-+.
T Consensus 13 vtikI~~~~~~Gq~~eaLLDTGADdTVl~ 41 (116)
T 3liy_A 13 IKAQVDTQTSHPKTIEALLDTGADMTVIP 41 (116)
T ss_dssp EEEEEECSSSCCEEEEEEECTTBSSCEEE
T ss_pred EEEEEccccCCCeEeEEEeccCCCccEEe
Confidence 556778 999999999999998885
No 16
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=46.29 E-value=20 Score=29.26 Aligned_cols=24 Identities=8% Similarity=0.167 Sum_probs=20.2
Q ss_pred EEEEeecCCCCccccHH----HHhhcCC
Q 038652 62 VTIVIDSGASPNFISAE----QVDELKL 85 (174)
Q Consensus 62 v~~LIDSGSThnFIs~~----~v~~l~l 85 (174)
..++||||+|..++.++ +++.+.-
T Consensus 213 ~~~iiDSGTs~~~lP~~~~~~~~~~~~~ 240 (325)
T 2apr_A 213 FDGILDTGTTLLILPNNIAASVARAYGA 240 (325)
T ss_dssp EEEEECTTCSSEEEEHHHHHHHHHHHTC
T ss_pred ceEEEecCCccEECCHHHHHHHHHHHhc
Confidence 57899999999999999 7776653
No 17
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=44.09 E-value=29 Score=28.60 Aligned_cols=34 Identities=15% Similarity=0.189 Sum_probs=25.0
Q ss_pred EEEEE-EECCEEE------EEE-eecCCCCccccHHHHhhcC
Q 038652 51 FNVLG-FVGEHKV------TIV-IDSGASPNFISAEQVDELK 84 (174)
Q Consensus 51 mrl~g-~I~~~~v------~~L-IDSGSThnFIs~~~v~~l~ 84 (174)
+.+.+ .|+++.+ .++ ||||+|..++.+++++++.
T Consensus 213 v~l~~i~v~~~~~~~~~~~~ai~iDSGTt~~~lP~~~~~~l~ 254 (361)
T 1mpp_A 213 APVTGVKIDGSDAVSFDGAQAFTIDTGTNFFIAPSSFAEKVV 254 (361)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEEEETTCCSEEEEHHHHHHHH
T ss_pred EEEeEEEECCeeeccCCCCEEEEECCCCCceeCCHHHHHHHH
Confidence 44444 4666554 578 9999999999998887653
No 18
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=43.67 E-value=32 Score=27.99 Aligned_cols=35 Identities=17% Similarity=0.247 Sum_probs=26.6
Q ss_pred eEEEEE-EECCEEE-----EEEeecCCCCccccHHHHhhcC
Q 038652 50 TFNVLG-FVGEHKV-----TIVIDSGASPNFISAEQVDELK 84 (174)
Q Consensus 50 tmrl~g-~I~~~~v-----~~LIDSGSThnFIs~~~v~~l~ 84 (174)
.+.+.+ .|++..+ .++||||+|-.++.+++++++.
T Consensus 195 ~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~ 235 (329)
T 1dpj_A 195 EVKFEGIGLGDEYAELESHGAAIDTGTSLITLPSGLAEMIN 235 (329)
T ss_dssp EEEEEEEEETTEEEECSSCEEEECTTCSCEEECHHHHHHHH
T ss_pred EEEeeeEEECCeEecCCCccEEeeCCCCcEECCHHHHHHHH
Confidence 455554 4666654 4899999999999999888763
No 19
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=42.96 E-value=33 Score=28.05 Aligned_cols=34 Identities=21% Similarity=0.398 Sum_probs=25.4
Q ss_pred eEEEEE-EECCEEE----EEEeecCCCCccccHHHHhhc
Q 038652 50 TFNVLG-FVGEHKV----TIVIDSGASPNFISAEQVDEL 83 (174)
Q Consensus 50 tmrl~g-~I~~~~v----~~LIDSGSThnFIs~~~v~~l 83 (174)
.+.+.+ .|+++.+ .++||||+|..++.+++++++
T Consensus 196 ~v~l~~i~v~g~~~~~~~~aiiDSGTt~~~lP~~~~~~l 234 (342)
T 2qzx_A 196 TVGLRSVNVRGRNVDANTNVLLDSGTTISYFTRSIVRNI 234 (342)
T ss_dssp EEEEEEEEETTEEEEEEEEEEECTTCSSEEECHHHHHHH
T ss_pred EEEEeEEEECCEecCCCcCEEEeCCCCCEEcCHHHHHHH
Confidence 345544 4566543 589999999999999988866
No 20
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=42.89 E-value=25 Score=28.62 Aligned_cols=35 Identities=14% Similarity=0.302 Sum_probs=25.4
Q ss_pred eEEEEE-EECCEEE----EEEeecCCCCccccHHHHhhcC
Q 038652 50 TFNVLG-FVGEHKV----TIVIDSGASPNFISAEQVDELK 84 (174)
Q Consensus 50 tmrl~g-~I~~~~v----~~LIDSGSThnFIs~~~v~~l~ 84 (174)
.+.+.+ .|+++.+ .++||||.|..++..++++++.
T Consensus 198 ~v~l~~i~v~g~~~~~~~~~iiDSGtt~~~lP~~~~~~i~ 237 (339)
T 3fv3_A 198 TISLASVNLKGSSFSFGDGALLDSGTTLTYFPSDFAAQLA 237 (339)
T ss_dssp EEEEEEEEESSCEEEEEEEEEECTTBSSEEECHHHHHHHH
T ss_pred EEEEEEEEECCEeecCCccEEEeCCCCCEecCHHHHHHHH
Confidence 344444 3555543 5999999999999999888764
No 21
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=42.82 E-value=34 Score=27.84 Aligned_cols=35 Identities=17% Similarity=0.383 Sum_probs=26.2
Q ss_pred eEEEEE-EECCEE-----EEEEeecCCCCccccHHHHhhcC
Q 038652 50 TFNVLG-FVGEHK-----VTIVIDSGASPNFISAEQVDELK 84 (174)
Q Consensus 50 tmrl~g-~I~~~~-----v~~LIDSGSThnFIs~~~v~~l~ 84 (174)
.+.+.+ .|+++. ..++||||+|..++..++++++.
T Consensus 195 ~v~l~~i~v~g~~~~~~~~~~iiDSGtt~~~lP~~~~~~i~ 235 (342)
T 3pvk_A 195 RISLGSVEVSGKTINTDNVDVLLDSGTTITYLQQDLADQII 235 (342)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEECTTCSSEEECHHHHHHHH
T ss_pred EEEEeEEEECCEEecCCCceEEEeCCCCCeecCHHHHHHHH
Confidence 344544 456655 57999999999999999888764
No 22
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=42.40 E-value=21 Score=29.13 Aligned_cols=29 Identities=10% Similarity=0.268 Sum_probs=23.8
Q ss_pred eEEEEEEECCEEEEEEeecCCCCccccHH
Q 038652 50 TFNVLGFVGEHKVTIVIDSGASPNFISAE 78 (174)
Q Consensus 50 tmrl~g~I~~~~v~~LIDSGSThnFIs~~ 78 (174)
.......|+.+++.++||+||+.-++...
T Consensus 16 ~Y~~~i~iG~Q~~~v~~DTGSs~lWv~~~ 44 (323)
T 1bxo_A 16 EYITPVTIGGTTLNLNFDTGSADLWVFST 44 (323)
T ss_dssp CEEEEEEETTEEEEEEEETTCCCEEECBT
T ss_pred EEEEEEEECCEEEEEEEeCCCcceEEecC
Confidence 35566778899999999999999998653
No 23
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=42.21 E-value=21 Score=29.16 Aligned_cols=29 Identities=14% Similarity=0.305 Sum_probs=23.9
Q ss_pred eEEEEEEECCEEEEEEeecCCCCccccHH
Q 038652 50 TFNVLGFVGEHKVTIVIDSGASPNFISAE 78 (174)
Q Consensus 50 tmrl~g~I~~~~v~~LIDSGSThnFIs~~ 78 (174)
.......|+.+++.++||+||+.-++...
T Consensus 16 ~Y~~~i~iG~q~~~v~~DTGSs~lWv~~~ 44 (323)
T 1izd_A 16 EYITQVTVGDDTLGLDFDTGSADLWVFSS 44 (323)
T ss_dssp CEEEEEEETTEEEEEEEETTCCCEEECBT
T ss_pred EEEEEEEECCEEEEEEEcCCCcceEEecC
Confidence 34566778899999999999999998654
No 24
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=42.13 E-value=22 Score=30.05 Aligned_cols=21 Identities=5% Similarity=0.139 Sum_probs=18.3
Q ss_pred EEeecCCCCccccHHHHhhcC
Q 038652 64 IVIDSGASPNFISAEQVDELK 84 (174)
Q Consensus 64 ~LIDSGSThnFIs~~~v~~l~ 84 (174)
++||||.|..++.+++++.+.
T Consensus 262 aiiDSGTt~~~lp~~~~~~l~ 282 (403)
T 3aup_A 262 TMISTSTPHMVLQQSVYQAFT 282 (403)
T ss_dssp EEECSSCSSEEECHHHHHHHH
T ss_pred EEEECCCccEEeCHHHHHHHH
Confidence 899999999999998877653
No 25
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=40.79 E-value=23 Score=29.05 Aligned_cols=27 Identities=15% Similarity=0.261 Sum_probs=22.2
Q ss_pred EEEEEECCEEEEEEeecCCCCccccHH
Q 038652 52 NVLGFVGEHKVTIVIDSGASPNFISAE 78 (174)
Q Consensus 52 rl~g~I~~~~v~~LIDSGSThnFIs~~ 78 (174)
.....|+.+++.++||+||+.-++...
T Consensus 20 ~~~i~iG~Q~~~v~~DTGSs~lWv~~~ 46 (330)
T 1yg9_A 20 AGITKIGNQNFLTVFDSTSCNVVVASQ 46 (330)
T ss_dssp EEEEEETTEEEEEEEETTCCCEEEECT
T ss_pred EEEEEECCEEEEEEEeCCCcceEEecC
Confidence 345667799999999999999998644
No 26
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=40.27 E-value=29 Score=27.99 Aligned_cols=35 Identities=17% Similarity=0.297 Sum_probs=26.1
Q ss_pred eEEEEE-EECCEE------EEEEeecCCCCccccHHHHhhcC
Q 038652 50 TFNVLG-FVGEHK------VTIVIDSGASPNFISAEQVDELK 84 (174)
Q Consensus 50 tmrl~g-~I~~~~------v~~LIDSGSThnFIs~~~v~~l~ 84 (174)
.+.+.+ .|+++. ..++||||+|..++..++++++.
T Consensus 189 ~v~l~~i~v~~~~~~~~~~~~~iiDsGtt~~~lP~~~~~~i~ 230 (320)
T 4aa9_A 189 QFTVDSVTINGVAVACVGGCQAILDTGTSVLFGPSSDILKIQ 230 (320)
T ss_dssp EEEECEEEETTEEEESTTCEEEEECTTCSSEEEEHHHHHHHH
T ss_pred EEEEeEEEECCEEeccCCCcEEEEECCCCcEECCHHHHHHHH
Confidence 345554 466654 36899999999999998887764
No 27
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=39.88 E-value=40 Score=27.52 Aligned_cols=34 Identities=21% Similarity=0.369 Sum_probs=25.3
Q ss_pred eEEEEE-EECCEEE----EEEeecCCCCccccHHHHhhc
Q 038652 50 TFNVLG-FVGEHKV----TIVIDSGASPNFISAEQVDEL 83 (174)
Q Consensus 50 tmrl~g-~I~~~~v----~~LIDSGSThnFIs~~~v~~l 83 (174)
.+.+.+ .|+++.+ .++||||+|..++.+++++++
T Consensus 196 ~v~l~~i~v~g~~~~~~~~~iiDSGTt~~~lP~~~~~~l 234 (334)
T 1j71_A 196 RVHLGSINFDGTSVSTNADVVLDSGTTITYFSQSTADKF 234 (334)
T ss_dssp EEEEEEEEETTEEEEEEEEEEECTTCSSEEECHHHHHHH
T ss_pred EEEEeEEEECCEeccCCccEEEeCCCCcEecCHHHHHHH
Confidence 345544 4566553 589999999999999888765
No 28
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=39.58 E-value=64 Score=26.49 Aligned_cols=30 Identities=13% Similarity=0.428 Sum_probs=24.7
Q ss_pred CeEEEEEEEC--CEEEEEEeecCCCCccccHH
Q 038652 49 KTFNVLGFVG--EHKVTIVIDSGASPNFISAE 78 (174)
Q Consensus 49 ~tmrl~g~I~--~~~v~~LIDSGSThnFIs~~ 78 (174)
....+...|+ .+++.++||+||+.-++...
T Consensus 18 ~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 18 EEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHK 49 (361)
T ss_dssp TEEEEEEEETTTTEEEEEEEETTCCCCEEEBT
T ss_pred CEEEEEEEECCCCcEEEEEEcCCCCCeEECCC
Confidence 3456677788 89999999999999998654
No 29
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=39.54 E-value=20 Score=28.05 Aligned_cols=28 Identities=21% Similarity=0.291 Sum_probs=22.7
Q ss_pred EECCEE-------EEEEeecCCCCccccHHHHhhc
Q 038652 56 FVGEHK-------VTIVIDSGASPNFISAEQVDEL 83 (174)
Q Consensus 56 ~I~~~~-------v~~LIDSGSThnFIs~~~v~~l 83 (174)
.|+++. .-++||||.|..++.+++++++
T Consensus 198 ~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~~~~~i 232 (239)
T 1b5f_A 198 LIGDKSTGFCAPGCQAFADSGTSLLSGPTAIVTQI 232 (239)
T ss_dssp EETTEECCTTTTCEEEEECTTCSSEEECHHHHHHH
T ss_pred EECCEEecccCCCCEEEEecCcchhhCCHHHHHHH
Confidence 466655 3689999999999999988765
No 30
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=39.38 E-value=23 Score=28.94 Aligned_cols=29 Identities=14% Similarity=0.308 Sum_probs=23.6
Q ss_pred eEEEEEEECCEEEEEEeecCCCCccccHH
Q 038652 50 TFNVLGFVGEHKVTIVIDSGASPNFISAE 78 (174)
Q Consensus 50 tmrl~g~I~~~~v~~LIDSGSThnFIs~~ 78 (174)
.......|+.+++.++||+||+.-++...
T Consensus 15 ~Y~~~i~iG~Q~~~v~~DTGSs~lWv~~~ 43 (325)
T 1ibq_A 15 EYLTPVTVGKSTLHLDFDTGSADLWVFSD 43 (325)
T ss_dssp CEEEEEEEBTEEEEEEEETTCCCEEEECT
T ss_pred EEEEEEEECCEEEEEEEeCCCccceEeeC
Confidence 34556677799999999999999998653
No 31
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=39.35 E-value=40 Score=27.73 Aligned_cols=33 Identities=18% Similarity=0.298 Sum_probs=25.4
Q ss_pred EEEEE-EECCEEE------EEEeecCCCCccccHHHHhhc
Q 038652 51 FNVLG-FVGEHKV------TIVIDSGASPNFISAEQVDEL 83 (174)
Q Consensus 51 mrl~g-~I~~~~v------~~LIDSGSThnFIs~~~v~~l 83 (174)
+.+.+ .|+++.+ .++||||+|..++..++++.+
T Consensus 205 v~l~~i~v~~~~~~~~~~~~aiiDSGTs~~~lP~~~~~~l 244 (351)
T 1tzs_A 205 IALDNIQVGGTVMFCSEGCQAIVDTGTSLITGPSDKIKQL 244 (351)
T ss_dssp EEEEEEEETTEEEECTTCEEEEECTTCSSEEECHHHHHHH
T ss_pred EEeCEEEECCceEEcCCCceEEeccCCcceeCCHHHHHHH
Confidence 44544 4677663 689999999999999888765
No 32
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=37.61 E-value=20 Score=29.29 Aligned_cols=34 Identities=15% Similarity=0.329 Sum_probs=25.5
Q ss_pred EEEEE-EECCEE-------EEEEeecCCCCccccHHHHhhcC
Q 038652 51 FNVLG-FVGEHK-------VTIVIDSGASPNFISAEQVDELK 84 (174)
Q Consensus 51 mrl~g-~I~~~~-------v~~LIDSGSThnFIs~~~v~~l~ 84 (174)
+.+.+ .|+++. ..++||||+|..++.+++++++.
T Consensus 193 v~l~~i~v~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~l~ 234 (329)
T 1htr_B 193 IGIEEFLIGGQASGWCSEGCQAIVDTGTSLLTVPQQYMSALL 234 (329)
T ss_dssp EEECEEEETTEECCTTTTCEEEEECTTCCSEEEEGGGHHHHH
T ss_pred EEEeEEEECCceeeecCCCceEEEecCCccEECCHHHHHHHH
Confidence 44443 466655 46999999999999998888763
No 33
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=37.29 E-value=30 Score=28.24 Aligned_cols=30 Identities=20% Similarity=0.306 Sum_probs=24.3
Q ss_pred CeEEEEEEEC--CEEEEEEeecCCCCccccHH
Q 038652 49 KTFNVLGFVG--EHKVTIVIDSGASPNFISAE 78 (174)
Q Consensus 49 ~tmrl~g~I~--~~~v~~LIDSGSThnFIs~~ 78 (174)
....+...|+ .+++.++||+||+.-++...
T Consensus 15 ~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~ 46 (325)
T 2apr_A 15 IEYYGQVTIGTPGKKFNLDFDTGSSDLWIAST 46 (325)
T ss_dssp TEEEEEEEETTTTEEEEEEEETTCCCCEEEBT
T ss_pred CEEEEEEEECCCCeEEEEEEcCCCCCEEEccC
Confidence 3455667788 89999999999999998643
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=37.24 E-value=30 Score=27.05 Aligned_cols=28 Identities=21% Similarity=0.366 Sum_probs=22.9
Q ss_pred eEEEEEEEC--CEEEEEEeecCCCCccccH
Q 038652 50 TFNVLGFVG--EHKVTIVIDSGASPNFISA 77 (174)
Q Consensus 50 tmrl~g~I~--~~~v~~LIDSGSThnFIs~ 77 (174)
.......|+ .+++.++||+||+.-++..
T Consensus 14 ~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~ 43 (239)
T 1b5f_A 14 SYFGEIGIGTPPQKFTVIFDTGSSVLWVPS 43 (239)
T ss_dssp EEEEEEEETTTTEEEEEEEETTCCCEEEEB
T ss_pred EEEEEEEECCCCeEEEEEEeCCCcceEEEc
Confidence 455566787 7999999999999999853
No 35
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=35.05 E-value=34 Score=27.99 Aligned_cols=28 Identities=25% Similarity=0.449 Sum_probs=23.5
Q ss_pred eEEEEEEEC--CEEEEEEeecCCCCccccH
Q 038652 50 TFNVLGFVG--EHKVTIVIDSGASPNFISA 77 (174)
Q Consensus 50 tmrl~g~I~--~~~v~~LIDSGSThnFIs~ 77 (174)
...+...|+ .+++.++||+||+.-++..
T Consensus 13 ~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~ 42 (340)
T 1wkr_A 13 DYVVNVGVGSPATTYSLLVDTGSSNTWLGA 42 (340)
T ss_dssp CEEEEEEETTTTEEEEEEEETTCCCCEECS
T ss_pred EEEEEEEECCCCcEEEEEEeCCChhheecC
Confidence 456677788 8999999999999999864
No 36
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=34.39 E-value=34 Score=27.78 Aligned_cols=29 Identities=14% Similarity=0.269 Sum_probs=22.9
Q ss_pred EECCEE-----EEEEeecCCCCccccHHHHhhcC
Q 038652 56 FVGEHK-----VTIVIDSGASPNFISAEQVDELK 84 (174)
Q Consensus 56 ~I~~~~-----v~~LIDSGSThnFIs~~~v~~l~ 84 (174)
.|+++. ..++||||+|..++.+++++.+.
T Consensus 198 ~v~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~l~ 231 (324)
T 1am5_A 198 TVNGQTAACEGCQAIVDTGTSKIVAPVSALANIM 231 (324)
T ss_dssp EETTEECCCCCEEEEECTTCSSEEECTTTHHHHH
T ss_pred EECCceeeccCceEEEecCCccEECCHHHHHHHH
Confidence 456655 56999999999999988877653
No 37
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=34.08 E-value=26 Score=29.28 Aligned_cols=33 Identities=12% Similarity=0.299 Sum_probs=25.2
Q ss_pred EEEEE-EECCEEEE----------EEeecCCCCccccHHHHhhc
Q 038652 51 FNVLG-FVGEHKVT----------IVIDSGASPNFISAEQVDEL 83 (174)
Q Consensus 51 mrl~g-~I~~~~v~----------~LIDSGSThnFIs~~~v~~l 83 (174)
+.+.+ .|+++.+. ++||||.|..++.+++.+.+
T Consensus 208 v~l~~i~vg~~~~~~~~~~~~~~~~iiDTGTtl~~lp~~~~~~l 251 (381)
T 1t6e_X 208 ISARSIVVGDTRVPVPEGALATGGVMLSTRLPYVLLRPDVYRPL 251 (381)
T ss_dssp ECEEEEEETTEECCCCTTCSCTTCEEECSSCSSEEECHHHHHHH
T ss_pred EEEEEEEEcCEEecCCHHHccCCCEEEECCCccEEeCHHHHHHH
Confidence 55554 57777652 89999999999999887754
No 38
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=33.77 E-value=35 Score=27.87 Aligned_cols=29 Identities=14% Similarity=0.306 Sum_probs=23.7
Q ss_pred eEEEEEEEC--CEEEEEEeecCCCCccccHH
Q 038652 50 TFNVLGFVG--EHKVTIVIDSGASPNFISAE 78 (174)
Q Consensus 50 tmrl~g~I~--~~~v~~LIDSGSThnFIs~~ 78 (174)
.......|+ .+++.++||+||+.-++...
T Consensus 16 ~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~ 46 (329)
T 1oew_A 16 AYITPVQIGTPAQTLNLDFDTGSSDLWVFSS 46 (329)
T ss_dssp CEEEEEEETTTTEEEEEEEETTCCCEEECBT
T ss_pred EEEEEEEECCCCeEEEEEECCCCCCeEEecC
Confidence 345666778 89999999999999998654
No 39
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=33.23 E-value=17 Score=29.73 Aligned_cols=25 Identities=12% Similarity=0.209 Sum_probs=21.6
Q ss_pred EEEEEEeecCCCCccccHHHHhhcC
Q 038652 60 HKVTIVIDSGASPNFISAEQVDELK 84 (174)
Q Consensus 60 ~~v~~LIDSGSThnFIs~~~v~~l~ 84 (174)
....++||||+|..++.+++++++.
T Consensus 206 ~~~~aiiDSGTs~~~lP~~~~~~l~ 230 (323)
T 1bxo_A 206 DGFSGIADTGTTLLLLDDSVVSQYY 230 (323)
T ss_dssp EEEEEEECTTCSSEEECHHHHHHHH
T ss_pred CCceEEEeCCCCceeCCHHHHHHHH
Confidence 4467999999999999999988764
No 40
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=32.95 E-value=17 Score=29.68 Aligned_cols=25 Identities=20% Similarity=0.306 Sum_probs=21.3
Q ss_pred EEEEEEeecCCCCccccHHHHhhcC
Q 038652 60 HKVTIVIDSGASPNFISAEQVDELK 84 (174)
Q Consensus 60 ~~v~~LIDSGSThnFIs~~~v~~l~ 84 (174)
....++||||.|..++.+++++++.
T Consensus 207 ~~~~aiiDSGTs~~~lp~~~~~~i~ 231 (323)
T 1izd_A 207 DSITGIADTGTTLLLLDDSIVDAYY 231 (323)
T ss_dssp CCEEEEECTTCCSEEECHHHHHHHH
T ss_pred CCceEEEeCCCcceeCCHHHHHHHH
Confidence 3457899999999999999988764
No 41
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=32.78 E-value=37 Score=27.78 Aligned_cols=27 Identities=30% Similarity=0.554 Sum_probs=22.9
Q ss_pred eEEEEEEEC--CEEEEEEeecCCCCcccc
Q 038652 50 TFNVLGFVG--EHKVTIVIDSGASPNFIS 76 (174)
Q Consensus 50 tmrl~g~I~--~~~v~~LIDSGSThnFIs 76 (174)
...+...|+ .+++.++||+||+.-++.
T Consensus 13 ~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~ 41 (342)
T 2qzx_A 13 TYTADITVGSDNQKLNVIVDTGSSDLWIP 41 (342)
T ss_dssp CEEEEEEETTTTEEEEEEEETTCCCEEEE
T ss_pred EEEEEEEECCCCcEEEEEEeCCCCCeEEe
Confidence 455667788 899999999999999985
No 42
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=32.56 E-value=37 Score=27.59 Aligned_cols=28 Identities=25% Similarity=0.476 Sum_probs=23.5
Q ss_pred eEEEEEEEC--CEEEEEEeecCCCCccccH
Q 038652 50 TFNVLGFVG--EHKVTIVIDSGASPNFISA 77 (174)
Q Consensus 50 tmrl~g~I~--~~~v~~LIDSGSThnFIs~ 77 (174)
...+...|+ .+++.++||+||+.-++..
T Consensus 13 ~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~ 42 (339)
T 3fv3_A 13 SYASKVSVGSNKQQQTVIIDTGSSDFWVVD 42 (339)
T ss_dssp SEEEEEEETTTTEEEEEEEETTCCCEEEEE
T ss_pred EEEEEEEEcCCCcEEEEEEeCCCCceEEec
Confidence 456677787 7999999999999999863
No 43
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=32.40 E-value=38 Score=27.65 Aligned_cols=29 Identities=14% Similarity=0.273 Sum_probs=23.6
Q ss_pred eEEEEEEEC--CEEEEEEeecCCCCccccHH
Q 038652 50 TFNVLGFVG--EHKVTIVIDSGASPNFISAE 78 (174)
Q Consensus 50 tmrl~g~I~--~~~v~~LIDSGSThnFIs~~ 78 (174)
.......|+ .+++.++||+||+.-++...
T Consensus 16 ~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~ 46 (329)
T 3c9x_A 16 EYITSVSIGTPAQVLPLDFDTGSSDLWVFSS 46 (329)
T ss_dssp CEEEEEEETTTTEEEEEEEETTCCCEEECBT
T ss_pred EEEEEEEECCCCeEEEEEEcCCCCCeEEecC
Confidence 345666788 89999999999999998653
No 44
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=32.27 E-value=38 Score=27.51 Aligned_cols=28 Identities=14% Similarity=0.388 Sum_probs=22.9
Q ss_pred eEEEEEEEC--CEEEEEEeecCCCCccccH
Q 038652 50 TFNVLGFVG--EHKVTIVIDSGASPNFISA 77 (174)
Q Consensus 50 tmrl~g~I~--~~~v~~LIDSGSThnFIs~ 77 (174)
.......|+ .+++.++||+||+.-++..
T Consensus 14 ~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~ 43 (329)
T 1dpj_A 14 QYYTDITLGTPPQNFKVILDTGSSNLWVPS 43 (329)
T ss_dssp EEEEEEEETTTTEEEEEEEETTCCCEEEEB
T ss_pred EEEEEEEECCCCcEEEEEEeCCCcCeEEec
Confidence 455666777 7999999999999999854
No 45
>2k4v_A Uncharacterized protein PA1076; structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Pseudomonas aeruginosa}
Probab=32.12 E-value=90 Score=23.00 Aligned_cols=42 Identities=14% Similarity=0.162 Sum_probs=31.3
Q ss_pred eEEEEEEECCEEE--EEEeecCCCCcccc--HHHHhhcCCcccccc
Q 038652 50 TFNVLGFVGEHKV--TIVIDSGASPNFIS--AEQVDELKLPISEAE 91 (174)
Q Consensus 50 tmrl~g~I~~~~v--~~LIDSGSThnFIs--~~~v~~l~l~~~~~~ 91 (174)
.|++.|.|+|+++ ..-+-=--.-||.+ .++|.++|+|....+
T Consensus 42 ~f~m~Gei~gk~f~E~F~L~rD~AfnFa~~~tR~a~~hGlp~~~~~ 87 (125)
T 2k4v_A 42 HFDMDGEIDGKPFSDSFELPRDTAFNFASDATRVAQKHGLHPKFGA 87 (125)
T ss_dssp EEEEEEEETTEEEEEEEEEETTTGGGHHHHHHHHHHHTTCCGGGCS
T ss_pred EEEEEEEECCEeccceeeccHHHHHHHHHHHHHHHHHcCCCCcccc
Confidence 6899999999997 33333444558887 478999999987654
No 46
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=31.65 E-value=39 Score=27.54 Aligned_cols=27 Identities=33% Similarity=0.540 Sum_probs=23.0
Q ss_pred eEEEEEEEC--CEEEEEEeecCCCCcccc
Q 038652 50 TFNVLGFVG--EHKVTIVIDSGASPNFIS 76 (174)
Q Consensus 50 tmrl~g~I~--~~~v~~LIDSGSThnFIs 76 (174)
.......|+ .+++.++||+||+.-++.
T Consensus 13 ~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~ 41 (334)
T 1j71_A 13 SYAADIVVGSNQQKQTVVIDTGSSDLWVV 41 (334)
T ss_dssp SEEEEEEETTTTEEEEEEEETTCCCEEEE
T ss_pred EEEEEEEEcCCCcEEEEEEcCCCCCEEEe
Confidence 455667788 899999999999999985
No 47
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=31.54 E-value=38 Score=27.67 Aligned_cols=28 Identities=14% Similarity=0.388 Sum_probs=23.3
Q ss_pred EECC-EEE----EEEeecCCCCccccHHHHhhc
Q 038652 56 FVGE-HKV----TIVIDSGASPNFISAEQVDEL 83 (174)
Q Consensus 56 ~I~~-~~v----~~LIDSGSThnFIs~~~v~~l 83 (174)
.|++ +.+ .++||||.|..++.+++++++
T Consensus 196 ~v~~~~~l~~~~~aiiDSGTt~~~lP~~~~~~l 228 (340)
T 1wkr_A 196 RYGSSTSILSSTAGIVDTGTTLTLIASDAFAKY 228 (340)
T ss_dssp EETTTEEEEEEEEEEECTTBCSEEECHHHHHHH
T ss_pred EECCCeEccCCCeEEEeCCcccccCCHHHHHHH
Confidence 5666 544 699999999999999998876
No 48
>2k57_A Putative lipoprotein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pseudomonas syringae PV} SCOP: b.38.1.6
Probab=30.61 E-value=1.1e+02 Score=19.72 Aligned_cols=43 Identities=12% Similarity=0.155 Sum_probs=35.7
Q ss_pred ceeEEEecCCCeeeeeeeEeCeeeecccCceEEEeeeeEEEEEe-CCeEEEEecCC
Q 038652 91 EAYGVILGTGKSKKTQGVCRNYKWLETLGVTHINWKTRVMKFTF-GKSQIVLQGDP 145 (174)
Q Consensus 91 ~p~~V~vanG~~l~~~~~c~~mdWL~~~gp~~iDw~~~t~~f~~-~g~~V~L~G~~ 145 (174)
.++.+..-||+.+.+.|. | .+|=.+..++|.. .|+.+.+..+.
T Consensus 3 S~yvitt~DG~~IvT~gK-----------P-~~D~dTGmysY~D~~G~~~qIn~dd 46 (61)
T 2k57_A 3 SPTVITLNDGREIQAVDT-----------P-KYDEESGFYEFKQLDGKQTRINKDQ 46 (61)
T ss_dssp CCEEEEESSSCEEEESSC-----------C-EECTTTCEEEEEBTTSCEEEEETTT
T ss_pred CceEEEeCCCcEEEcCCC-----------c-cccCCCCCEEEEcCCCCEEEEcHHH
Confidence 467788999999988774 7 8999999999987 89998888653
No 49
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=30.08 E-value=44 Score=26.90 Aligned_cols=27 Identities=22% Similarity=0.489 Sum_probs=21.7
Q ss_pred EEEEEEEC--CEEEEEEeecCCCCccccH
Q 038652 51 FNVLGFVG--EHKVTIVIDSGASPNFISA 77 (174)
Q Consensus 51 mrl~g~I~--~~~v~~LIDSGSThnFIs~ 77 (174)
......|+ .+++.++||+||+.-++..
T Consensus 13 Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~ 41 (320)
T 4aa9_A 13 YFGKIYIGTPPQEFTVVFDTGSSDLWVPS 41 (320)
T ss_dssp CEEEEEETTTTEEEEEEEETTCCCEEEEB
T ss_pred EEEEEEECCCCeEEEEEEeCCCCceEEcC
Confidence 34455676 6899999999999999964
No 50
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=29.99 E-value=42 Score=28.04 Aligned_cols=28 Identities=29% Similarity=0.420 Sum_probs=23.4
Q ss_pred eEEEEEEEC--CEEEEEEeecCCCCccccH
Q 038652 50 TFNVLGFVG--EHKVTIVIDSGASPNFISA 77 (174)
Q Consensus 50 tmrl~g~I~--~~~v~~LIDSGSThnFIs~ 77 (174)
...+...|+ .+++.++||+||+.-++..
T Consensus 22 ~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~ 51 (395)
T 2qp8_A 22 GYYVEMTVGSPPQTLNILVDTGSSNFAVGA 51 (395)
T ss_dssp EEEEEEEETTTTEEEEEEEETTCCCEEEEC
T ss_pred eEEEEEEecCCCceEEEEEecCCCceEEEC
Confidence 456667788 8999999999999999854
No 51
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=29.75 E-value=44 Score=27.10 Aligned_cols=27 Identities=26% Similarity=0.533 Sum_probs=22.6
Q ss_pred eEEEEEEEC--CEEEEEEeecCCCCcccc
Q 038652 50 TFNVLGFVG--EHKVTIVIDSGASPNFIS 76 (174)
Q Consensus 50 tmrl~g~I~--~~~v~~LIDSGSThnFIs 76 (174)
...+...|+ .+++.+++|+||+.-++.
T Consensus 13 ~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~ 41 (342)
T 3pvk_A 13 TYAADITVGSNNQKLNVIVDTGSSDLWVP 41 (342)
T ss_dssp SEEEEEEETTTTEEEEEEEETTCCCEEEE
T ss_pred EEEEEEEEcCCCcEEEEEEECCCcceEEE
Confidence 455667777 799999999999999984
No 52
>1wh3_A 59 kDa 2'-5'-oligoadenylate synthetase like protein; P59 OASL, ubiquitin family, structural genomics; NMR {Homo sapiens} SCOP: d.15.1.1
Probab=29.19 E-value=88 Score=19.95 Aligned_cols=46 Identities=13% Similarity=0.048 Sum_probs=37.0
Q ss_pred CCCCCCeEEEEEEE-CCEEEEEEeecCCCCccccHHHHhhcCCcccc
Q 038652 44 GLTLPKTFNVLGFV-GEHKVTIVIDSGASPNFISAEQVDELKLPISE 89 (174)
Q Consensus 44 G~~~~~tmrl~g~I-~~~~v~~LIDSGSThnFIs~~~v~~l~l~~~~ 89 (174)
|...+.+|++.... .++...+=|+.-.|-.=+-..+.++.++|...
T Consensus 1 ~~~~~~~m~i~Vk~~~g~~~~~~v~~~~tV~~lK~~i~~~~gi~~~~ 47 (87)
T 1wh3_A 1 GSSGSSGIQVFVKNPDGGSYAYAINPNSFILGLKQQIEDQQGLPKKQ 47 (87)
T ss_dssp CCCCSSSEEEEEEETTTEEEEEEECSSSBHHHHHHHHHHHTCCCTTT
T ss_pred CCCCCCCEEEEEEcCCCCEEEEEeCCCChHHHHHHHHHHHhCCChHH
Confidence 34566789998876 68888888999888888889999999887554
No 53
>2dzi_A Ubiquitin-like protein 4A; GDX, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.56 E-value=57 Score=20.44 Aligned_cols=45 Identities=4% Similarity=0.085 Sum_probs=35.7
Q ss_pred CCCCCeEEEEEEE-CCEEEEEEeecCCCCccccHHHHhhcCCcccc
Q 038652 45 LTLPKTFNVLGFV-GEHKVTIVIDSGASPNFISAEQVDELKLPISE 89 (174)
Q Consensus 45 ~~~~~tmrl~g~I-~~~~v~~LIDSGSThnFIs~~~v~~l~l~~~~ 89 (174)
...+.+|++.... +|+...+=++.-+|-.-+-..++++.++|...
T Consensus 2 ~~~~~~m~i~vk~~~g~~~~~~v~~~~tV~~LK~~i~~~~~i~~~~ 47 (81)
T 2dzi_A 2 SSGSSGMQLTVKALQGRECSLQVPEDELVSTLKQLVSEKLNVPVRQ 47 (81)
T ss_dssp CCSSSSEEEEEEETTSCEEEEEECSSCBHHHHHHHHHHHTCCCTTT
T ss_pred CCCCCcEEEEEEeCCCCEEEEEECCCCcHHHHHHHHHHHHCcCHHH
Confidence 3456778888864 57777788999999988999999999987654
No 54
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=28.43 E-value=69 Score=26.49 Aligned_cols=28 Identities=21% Similarity=0.464 Sum_probs=23.2
Q ss_pred eEEEEEEEC--CEEEEEEeecCCCCccccH
Q 038652 50 TFNVLGFVG--EHKVTIVIDSGASPNFISA 77 (174)
Q Consensus 50 tmrl~g~I~--~~~v~~LIDSGSThnFIs~ 77 (174)
...+...|+ .+++.++||+||+.-++..
T Consensus 14 ~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~ 43 (383)
T 2ewy_A 14 GYYLEMLIGTPPQKLQILVDTGSSNFAVAG 43 (383)
T ss_dssp EEEEEEEETTTTEEEEEEEETTCCCEEEEC
T ss_pred cEEEEEEecCCCceEEEEEecCCCceEEec
Confidence 355667787 7999999999999999854
No 55
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=27.48 E-value=51 Score=27.11 Aligned_cols=28 Identities=18% Similarity=0.354 Sum_probs=22.1
Q ss_pred EEEEEEEC--CEEEEEEeecCCCCccccHH
Q 038652 51 FNVLGFVG--EHKVTIVIDSGASPNFISAE 78 (174)
Q Consensus 51 mrl~g~I~--~~~v~~LIDSGSThnFIs~~ 78 (174)
..+...|+ .+++.++||+||+.-++...
T Consensus 25 Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~ 54 (351)
T 1tzs_A 25 YFGTISIGSPPQNFTVIFDTGSSNLWVPSV 54 (351)
T ss_dssp CCEEEEETTTTEEEEEEEETTCCCEEEEBT
T ss_pred EEEEEEECCCCeEEEEEEeCCCcceEEecC
Confidence 34556666 68999999999999998643
No 56
>1wgg_A Ubiquitin carboxyl-terminal hydrolase 14; ubiquitin specific protease 14, USP14, ubiquitin-like fold, structural genomics; NMR {Mus musculus} SCOP: d.15.1.1
Probab=27.34 E-value=1.3e+02 Score=20.06 Aligned_cols=46 Identities=11% Similarity=0.117 Sum_probs=38.1
Q ss_pred CCCCCeEEEEEEECCEEE-EEEeecCCCCccccHHHHhhcCCccccc
Q 038652 45 LTLPKTFNVLGFVGEHKV-TIVIDSGASPNFISAEQVDELKLPISEA 90 (174)
Q Consensus 45 ~~~~~tmrl~g~I~~~~v-~~LIDSGSThnFIs~~~v~~l~l~~~~~ 90 (174)
.....+|++..+.+++.. .+=+|.-+|-.=+-..+..+.++|....
T Consensus 2 ~~~~~~m~i~Vk~~g~~~~~l~v~~~~TV~~lK~~I~~~tgip~~~Q 48 (96)
T 1wgg_A 2 SSGSSGYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQ 48 (96)
T ss_dssp CSCCCEEEEEEEETTEEEEEEEEESSSCHHHHHHHHHHHTCCCTTTS
T ss_pred CCCCcEEEEEEEECCEEEEEEEECCCCcHHHHHHHHHHHHCcCHHHe
Confidence 445568999998899888 4889999999889999999999886654
No 57
>3v6c_B Ubiquitin; structural genomics, structural genomics consortium, SGC, UB protease, hydrolase-signaling protein complex; 1.70A {Homo sapiens} PDB: 3v6e_B
Probab=27.33 E-value=60 Score=21.25 Aligned_cols=50 Identities=12% Similarity=0.205 Sum_probs=39.0
Q ss_pred eccCCCCCCeEEEEEE-ECCEEEEEEeecCCCCccccHHHHhhcCCccccc
Q 038652 41 AVMGLTLPKTFNVLGF-VGEHKVTIVIDSGASPNFISAEQVDELKLPISEA 90 (174)
Q Consensus 41 A~~G~~~~~tmrl~g~-I~~~~v~~LIDSGSThnFIs~~~v~~l~l~~~~~ 90 (174)
+..+...+.+|++..+ .+|+...+-|+.-.|-.=+-..+..+.+++....
T Consensus 8 ~~~~~~~~~~m~i~Vk~~~g~~~~l~v~~~~TV~~LK~~I~~~~gip~~~q 58 (91)
T 3v6c_B 8 HSSGLVPRGSMQIFVNTLTGTHITLEVEPSDTIENVKAKIQDKEGIPPDQQ 58 (91)
T ss_dssp ---CCCCCCSEEEEEECTTSCEEEEEECTTCBHHHHHHHHHHHHCCCGGGC
T ss_pred ccCCCCCCCeEEEEEEeCCCCEEEEEECCCCCHHHHHHHHHhhhCCChhhE
Confidence 3345566778888887 5788888889999999999999999999887654
No 58
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=27.30 E-value=52 Score=26.64 Aligned_cols=28 Identities=18% Similarity=0.436 Sum_probs=22.7
Q ss_pred eEEEEEEEC--CEEEEEEeecCCCCccccH
Q 038652 50 TFNVLGFVG--EHKVTIVIDSGASPNFISA 77 (174)
Q Consensus 50 tmrl~g~I~--~~~v~~LIDSGSThnFIs~ 77 (174)
.......|+ .+++.++||+||+.-++..
T Consensus 15 ~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~ 44 (323)
T 3cms_A 15 QYFGKIYLGTPPQEFTVLFDTGSSDFWVPS 44 (323)
T ss_dssp EEEEEEEETTTTEEEEEEEETTCCCEEEEB
T ss_pred EEEEEEEECCCCeEEEEEEeCCccceEEcC
Confidence 455566777 6999999999999999864
No 59
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=27.28 E-value=52 Score=26.59 Aligned_cols=29 Identities=17% Similarity=0.395 Sum_probs=22.9
Q ss_pred eEEEEEEEC--CEEEEEEeecCCCCccccHH
Q 038652 50 TFNVLGFVG--EHKVTIVIDSGASPNFISAE 78 (174)
Q Consensus 50 tmrl~g~I~--~~~v~~LIDSGSThnFIs~~ 78 (174)
...+...|+ .+++.++||+||+.-++...
T Consensus 13 ~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~ 43 (324)
T 1am5_A 13 EYYGVISIGTPPESFKVIFDTGSSNLWVSSS 43 (324)
T ss_dssp EEEEEEEETTTTEEEEEEEETTCCCEEECBT
T ss_pred EEEEEEEECCCCeEEEEEEeCCCcceEEecC
Confidence 345566777 69999999999999998643
No 60
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=27.16 E-value=74 Score=26.54 Aligned_cols=29 Identities=28% Similarity=0.423 Sum_probs=24.2
Q ss_pred CeEEEEEEEC--CEEEEEEeecCCCCccccH
Q 038652 49 KTFNVLGFVG--EHKVTIVIDSGASPNFISA 77 (174)
Q Consensus 49 ~tmrl~g~I~--~~~v~~LIDSGSThnFIs~ 77 (174)
........|+ .+++.++||+||+.-++..
T Consensus 28 ~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~ 58 (402)
T 3vf3_A 28 QGYYVEMTVGSPPQTLNILVDTGSSNFAVGA 58 (402)
T ss_dssp TEEEEEEEETTTTEEEEEEEETTCCCEEEEC
T ss_pred CEEEEEEEECCCCeEEEEEEeCCCCceEEcc
Confidence 3566777888 8999999999999999854
No 61
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=26.99 E-value=53 Score=26.61 Aligned_cols=28 Identities=14% Similarity=0.305 Sum_probs=22.3
Q ss_pred eEEEEEEEC--CEEEEEEeecCCCCccccH
Q 038652 50 TFNVLGFVG--EHKVTIVIDSGASPNFISA 77 (174)
Q Consensus 50 tmrl~g~I~--~~~v~~LIDSGSThnFIs~ 77 (174)
...+...|+ .+++.++||+||+.-++..
T Consensus 13 ~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~ 42 (329)
T 1htr_B 13 AYFGEISIGTPPQNFLVLFDTGSSNLWVPS 42 (329)
T ss_dssp CEEEEEEETTTTEEEEEEEETTCCCEEEEB
T ss_pred EEEEEEEECCCCcEEEEEEcCCCccEEEec
Confidence 344556677 6899999999999999864
No 62
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=26.98 E-value=67 Score=26.95 Aligned_cols=29 Identities=7% Similarity=-0.013 Sum_probs=23.8
Q ss_pred CeEEEEEEEC--CEEEEEEeecCCCCccccH
Q 038652 49 KTFNVLGFVG--EHKVTIVIDSGASPNFISA 77 (174)
Q Consensus 49 ~tmrl~g~I~--~~~v~~LIDSGSThnFIs~ 77 (174)
....+...|+ .+++.++||+||+.-++..
T Consensus 21 ~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~ 51 (403)
T 3aup_A 21 GLHWANLQKRTPLMQVPVLVDLNGNHLWVNC 51 (403)
T ss_dssp CCEEEEEEETTTTEEEEEEEETTCSSEEEEC
T ss_pred ceEEEEEECCCCCceeEEEEECCCCceeECC
Confidence 4456677787 8999999999999999853
No 63
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=26.36 E-value=80 Score=26.39 Aligned_cols=35 Identities=17% Similarity=0.345 Sum_probs=26.5
Q ss_pred eEEEEEEECCE---EEEEEeecCCCCccccHHHHhhcC
Q 038652 50 TFNVLGFVGEH---KVTIVIDSGASPNFISAEQVDELK 84 (174)
Q Consensus 50 tmrl~g~I~~~---~v~~LIDSGSThnFIs~~~v~~l~ 84 (174)
.+.+...|+++ ...++||||+|-.++..++++.+.
T Consensus 242 ~v~l~i~v~g~~~~~~~aiiDSGTs~~~lP~~~~~~l~ 279 (375)
T 1miq_A 242 QIDLDVHFGKQTMEKANVIVDSGTTTITAPSEFLNKFF 279 (375)
T ss_dssp EEEEEEEETTEEEEEEEEEECTTBSSEEECHHHHHHHH
T ss_pred EEEEEEEECCEEcccceEEecCCCccEEcCHHHHHHHH
Confidence 34444556775 457999999999999998887663
No 64
>2jn0_A Hypothetical lipoprotein YGDR; solution structure, PSI-2 target, structural genomics, protein structure initiative; NMR {Escherichia coli} SCOP: b.38.1.6 PDB: 3fif_A
Probab=26.32 E-value=1.3e+02 Score=19.31 Aligned_cols=42 Identities=17% Similarity=0.216 Sum_probs=34.8
Q ss_pred ceeEEEecCCCeeeeeeeEeCeeeecccCceEEEeeeeEEEEEe-CCeEEEEecC
Q 038652 91 EAYGVILGTGKSKKTQGVCRNYKWLETLGVTHINWKTRVMKFTF-GKSQIVLQGD 144 (174)
Q Consensus 91 ~p~~V~vanG~~l~~~~~c~~mdWL~~~gp~~iDw~~~t~~f~~-~g~~V~L~G~ 144 (174)
.++.+..-||+.+.+.|. | .+|=.+..++|.. .|+.+.+..+
T Consensus 3 s~yvitT~DG~~IvT~GK-----------P-~~D~dTGm~sY~D~~G~~~qIn~d 45 (61)
T 2jn0_A 3 SDYVMATKDGRMILTDGK-----------P-EIDDDTGLVSYHDQQGNAMQINRD 45 (61)
T ss_dssp -CCEEEETTSCEEEBCCC-----------C-EEETTTTEEEEEBTTSCEEEEEGG
T ss_pred CcEEEEeCCCcEEEcCCC-----------c-cccCCCCCEEEEcCCCCEEEEcHH
Confidence 467788899999988774 7 8999999999987 8998888765
No 65
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=25.96 E-value=78 Score=27.49 Aligned_cols=35 Identities=17% Similarity=0.292 Sum_probs=27.0
Q ss_pred eEEEEEEECC---EEEEEEeecCCCCccccHHHHhhcC
Q 038652 50 TFNVLGFVGE---HKVTIVIDSGASPNFISAEQVDELK 84 (174)
Q Consensus 50 tmrl~g~I~~---~~v~~LIDSGSThnFIs~~~v~~l~ 84 (174)
.+.+...|++ ....++||||+|..++.+++++++-
T Consensus 317 ~v~l~I~Vgg~~~~~~~aiiDSGTt~i~lP~~~~~~i~ 354 (451)
T 3qvc_A 317 QVDLDVHFGNVSSKKANVILDSATSVITVPTEFFNQFV 354 (451)
T ss_dssp EEEEEEEETTEEEEEEEEEECTTBSSEEECHHHHHHHH
T ss_pred EEEEEEEECCccCCCceEEEeCCCccccCCHHHHHHHH
Confidence 3444445565 4578999999999999999998874
No 66
>2rb6_A Uncharacterized protein; NESG, Q8EI81_sheon, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.50A {Shewanella oneidensis} SCOP: b.38.1.6
Probab=25.91 E-value=1.4e+02 Score=19.27 Aligned_cols=42 Identities=10% Similarity=0.155 Sum_probs=35.1
Q ss_pred ceeEEEecCCCeeeeeeeEeCeeeecccCceEEEeeeeEEEEEe-CCeEEEEecC
Q 038652 91 EAYGVILGTGKSKKTQGVCRNYKWLETLGVTHINWKTRVMKFTF-GKSQIVLQGD 144 (174)
Q Consensus 91 ~p~~V~vanG~~l~~~~~c~~mdWL~~~gp~~iDw~~~t~~f~~-~g~~V~L~G~ 144 (174)
.++.+..-||+.+.+.|. | .+|=.+..++|.. .|+.+.+..+
T Consensus 3 S~yvitT~DG~~IvT~GK-----------P-~~D~dTGm~sY~D~~G~~~qIn~d 45 (61)
T 2rb6_A 3 SQYIMSTKDGKMITSDSK-----------P-KLDKTTGMYLYYDEDGREVMIKQE 45 (61)
T ss_dssp CEEEEEETTSCEEEESSC-----------C-EEETTTTEEEEECTTSCEEEEEGG
T ss_pred CcEEEEeCCCcEEEcCCC-----------c-cccCCCCCEEEEcCCCCEEEEcHH
Confidence 467788999999988774 7 8999999999987 8888888764
No 67
>3l7o_A Ribose-5-phosphate isomerase A; RPIA; 1.70A {Streptococcus mutans}
Probab=24.85 E-value=26 Score=28.16 Aligned_cols=20 Identities=10% Similarity=0.263 Sum_probs=16.8
Q ss_pred EEEeecCCCCccccHHHHhh
Q 038652 63 TIVIDSGASPNFISAEQVDE 82 (174)
Q Consensus 63 ~~LIDSGSThnFIs~~~v~~ 82 (174)
.+-+|||||..|+-+.++++
T Consensus 21 vIgLGsGST~~~~i~~L~~~ 40 (225)
T 3l7o_A 21 IVGLGTGSTAYYFVEEVGRR 40 (225)
T ss_dssp EEEECCSTTHHHHHHHHHHH
T ss_pred EEEECCcHHHHHHHHHHHHh
Confidence 57789999999888888775
No 68
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=24.84 E-value=32 Score=28.05 Aligned_cols=26 Identities=15% Similarity=0.224 Sum_probs=21.6
Q ss_pred EEEEEeecCCCCccccHHHHhhcCCc
Q 038652 61 KVTIVIDSGASPNFISAEQVDELKLP 86 (174)
Q Consensus 61 ~v~~LIDSGSThnFIs~~~v~~l~l~ 86 (174)
...++||||+|..++.+++++++.-.
T Consensus 208 ~~~aiiDSGTt~~~lP~~~~~~i~~~ 233 (325)
T 1ibq_A 208 GFSAIADTGTTLILLDDEIVSAYYEQ 233 (325)
T ss_dssp CEEEEECTTCCSEEECHHHHHHHHTT
T ss_pred CceEEEeCCCCcEeCCHHHHHHHHHh
Confidence 45799999999999999998876433
No 69
>3bdu_A Putative lipoprotein; X_RAY, NESG, Q6D8G1, structural genomics, PSI-2, protein structure initiative; 1.90A {Pectobacterium atrosepticum SCRI1043} SCOP: b.38.1.6
Probab=24.72 E-value=1.1e+02 Score=19.81 Aligned_cols=42 Identities=17% Similarity=0.223 Sum_probs=35.1
Q ss_pred ceeEEEecCCCeeeeeeeEeCeeeecccCceEEEeeeeEEEEEe-CCeEEEEecC
Q 038652 91 EAYGVILGTGKSKKTQGVCRNYKWLETLGVTHINWKTRVMKFTF-GKSQIVLQGD 144 (174)
Q Consensus 91 ~p~~V~vanG~~l~~~~~c~~mdWL~~~gp~~iDw~~~t~~f~~-~g~~V~L~G~ 144 (174)
.++.+..-||+.+.+.|. | .+|=.+..++|.. .|+.+.+..+
T Consensus 3 S~yvitt~DG~~IvT~gK-----------P-~~D~dTGmysY~D~~G~~~qIn~d 45 (62)
T 3bdu_A 3 SNYVLHTNDGRTIVAEGK-----------P-KVDDETGMISYTDAYGQQQQINRD 45 (62)
T ss_dssp CEEEEEETTSCEEEEESC-----------C-EECTTTSSEEEEBTTSCEEEECGG
T ss_pred CceEEEECCCcEEEcCCC-----------c-ceeCCCCCEEEEcCCCCEEEEcHH
Confidence 467788999999988774 7 8999999999987 8898888765
No 70
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=24.54 E-value=33 Score=27.90 Aligned_cols=34 Identities=26% Similarity=0.344 Sum_probs=25.5
Q ss_pred EEEEE-EECCEE------EEEEeecCCCCccccHHHHhhcC
Q 038652 51 FNVLG-FVGEHK------VTIVIDSGASPNFISAEQVDELK 84 (174)
Q Consensus 51 mrl~g-~I~~~~------v~~LIDSGSThnFIs~~~v~~l~ 84 (174)
+.+.+ .|++.. ..++||||.|..++..++++++.
T Consensus 203 v~l~~i~v~~~~~~~~~~~~~iiDsGtt~~~lP~~~~~~i~ 243 (341)
T 3k1w_A 203 IQMKGVSVGSSTLLCEDGCLALVDTGASYISGSTSSIEKLM 243 (341)
T ss_dssp EEECCEEETTEEEECTTCEEEEECTTCSSEEECHHHHHHHH
T ss_pred EEEeEEEECCEEeecCCCCEEEEECCCChhcCCHHHHHHHH
Confidence 44443 456654 47999999999999999888764
No 71
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=24.52 E-value=63 Score=26.15 Aligned_cols=28 Identities=18% Similarity=0.326 Sum_probs=22.8
Q ss_pred eEEEEEEEC--CEEEEEEeecCCCCccccH
Q 038652 50 TFNVLGFVG--EHKVTIVIDSGASPNFISA 77 (174)
Q Consensus 50 tmrl~g~I~--~~~v~~LIDSGSThnFIs~ 77 (174)
.......|+ .+++.++||+||+.-++..
T Consensus 19 ~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~ 48 (341)
T 3k1w_A 19 QYYGEIGIGTPPQTFKVVFDTGSSNVWVPS 48 (341)
T ss_dssp EEEEEEEETTTTEEEEEEEETTCCCEEEEB
T ss_pred EEEEEEEEcCCCcEEEEEEeCCCcceEEcc
Confidence 355566777 5999999999999999964
No 72
>2d10_E Ezrin-radixin-moesin binding phosphoprotein 50; protein-peptide complex, cell adhesion; 2.50A {Mus musculus}
Probab=24.35 E-value=11 Score=20.92 Aligned_cols=11 Identities=9% Similarity=0.274 Sum_probs=8.1
Q ss_pred eEeCeeeeccc
Q 038652 108 VCRNYKWLETL 118 (174)
Q Consensus 108 ~c~~mdWL~~~ 118 (174)
..|.|||..++
T Consensus 12 rap~MDw~kk~ 22 (28)
T 2d10_E 12 RAPQMDWSKKN 22 (28)
T ss_pred cCCcccHHHHH
Confidence 45669998876
No 73
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=24.33 E-value=30 Score=28.28 Aligned_cols=34 Identities=18% Similarity=0.309 Sum_probs=25.4
Q ss_pred EEEEE-EECCEE-----EEEEeecCCCCccccHHHHhhcC
Q 038652 51 FNVLG-FVGEHK-----VTIVIDSGASPNFISAEQVDELK 84 (174)
Q Consensus 51 mrl~g-~I~~~~-----v~~LIDSGSThnFIs~~~v~~l~ 84 (174)
+.+.+ .|+++. ..++||||+|..++.+++++++.
T Consensus 197 v~l~~i~v~~~~~~~~~~~aiiDSGTs~~~lP~~~~~~l~ 236 (330)
T 1yg9_A 197 FRLDGVKIGDTTVAPAGTQAIIDTSKAIIVGPKAYVNPIN 236 (330)
T ss_dssp EECSEEEETTEEEECTTCEEEECTTCSSEEEEHHHHHHHH
T ss_pred EEeCeEEECCEEEcCCCcEEEEecCCccccCCHHHHHHHH
Confidence 44433 466665 36899999999999999888764
No 74
>2rd1_A Putative outer membrane lipoprotein; X-RAY, NESG, Q7CQI7, STR87A, structural genomics, PSI-2, protein structure initiative; 2.30A {Salmonella typhimurium LT2} SCOP: b.38.1.6
Probab=23.94 E-value=1.5e+02 Score=19.11 Aligned_cols=42 Identities=19% Similarity=0.243 Sum_probs=35.3
Q ss_pred ceeEEEecCCCeeeeeeeEeCeeeecccCceEEEeeeeEEEEEe-CCeEEEEecC
Q 038652 91 EAYGVILGTGKSKKTQGVCRNYKWLETLGVTHINWKTRVMKFTF-GKSQIVLQGD 144 (174)
Q Consensus 91 ~p~~V~vanG~~l~~~~~c~~mdWL~~~gp~~iDw~~~t~~f~~-~g~~V~L~G~ 144 (174)
.++.+..-||+.+.+.|. | .+|=.+..++|.. .|+.+.+..+
T Consensus 3 S~yvitt~DG~~IvT~gK-----------P-~~D~dTGm~sY~D~~G~~~qIn~d 45 (62)
T 2rd1_A 3 TNYVMTTKNGQTIVTQGK-----------P-QLDKETGMTSYTDQEGNQREINSN 45 (62)
T ss_dssp CEEEEEETTSCEEEEESC-----------C-EEETTTTEEEEECTTSCEEEEEGG
T ss_pred CceEEEeCCCcEEEcCCC-----------c-ceeCCCCCEEEEcCCCCEEEEcHH
Confidence 467788999999988774 7 8999999999987 8898888764
No 75
>1vd2_A Protein kinase C, IOTA type; PB1 domain, OPCA motif, APKC, ZIP/P62, MEK5, molecular recognition, transferase; NMR {Homo sapiens} SCOP: d.15.2.2 PDB: 1wmh_A
Probab=23.81 E-value=1.4e+02 Score=20.38 Aligned_cols=40 Identities=13% Similarity=0.058 Sum_probs=32.2
Q ss_pred CCCeEEEEEEECCEEEEEEeecCCCCccccHHHHhhcCCc
Q 038652 47 LPKTFNVLGFVGEHKVTIVIDSGASPNFISAEQVDELKLP 86 (174)
Q Consensus 47 ~~~tmrl~g~I~~~~v~~LIDSGSThnFIs~~~v~~l~l~ 86 (174)
++++|+++...+|.-..+-+|+..+-.-+-.++.+++++.
T Consensus 3 ~~~~vkvK~~~~gdi~~~~v~~~i~~~~L~~kv~~~~~~~ 42 (89)
T 1vd2_A 3 LGSQVRVKAYYRGDIMITHFEPSISFEGLCNEVRDMCSFD 42 (89)
T ss_dssp CSSCEEEEEESSSCEEEEEECTTCCHHHHHHHHHHHTTCC
T ss_pred CCCeEEEEEEeCCeEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 4577999999999888888999776666777788877754
No 76
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=23.45 E-value=35 Score=27.84 Aligned_cols=24 Identities=17% Similarity=0.293 Sum_probs=20.9
Q ss_pred EEEEEeecCCCCccccHHHHhhcC
Q 038652 61 KVTIVIDSGASPNFISAEQVDELK 84 (174)
Q Consensus 61 ~v~~LIDSGSThnFIs~~~v~~l~ 84 (174)
...++||||.|..++.+++++++.
T Consensus 213 ~~~aiiDSGTt~~~lp~~~~~~i~ 236 (329)
T 3c9x_A 213 SIDGIADTGTTLLLLDDNVVDAYY 236 (329)
T ss_dssp CEEEEECTTCCSEEECHHHHHHHH
T ss_pred CceEEEECCCCcEeCCHHHHHHHH
Confidence 457999999999999999988764
No 77
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=23.32 E-value=32 Score=28.54 Aligned_cols=21 Identities=19% Similarity=0.349 Sum_probs=17.5
Q ss_pred EEEeecCCCCccccHHHHhhc
Q 038652 63 TIVIDSGASPNFISAEQVDEL 83 (174)
Q Consensus 63 ~~LIDSGSThnFIs~~~v~~l 83 (174)
.++||||+|..++.+++++++
T Consensus 222 ~aiiDSGTt~~~lP~~~~~~l 242 (383)
T 2ewy_A 222 KAIVDSGTTLLRLPQKVFDAV 242 (383)
T ss_dssp CEEECTTCSSEEEEHHHHHHH
T ss_pred cEEEEcCCccccCCHHHHHHH
Confidence 589999999999988776644
No 78
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=23.21 E-value=67 Score=27.14 Aligned_cols=29 Identities=17% Similarity=0.318 Sum_probs=23.2
Q ss_pred eEEEEEEEC--CEEEEEEeecCCCCccccHH
Q 038652 50 TFNVLGFVG--EHKVTIVIDSGASPNFISAE 78 (174)
Q Consensus 50 tmrl~g~I~--~~~v~~LIDSGSThnFIs~~ 78 (174)
.......|+ .+++.++||+||+.-++...
T Consensus 62 ~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~ 92 (383)
T 2x0b_A 62 QYYGEIGIGTPPQTFKVVFDTGSSNVWVPSS 92 (383)
T ss_dssp EEEEEEEETTTTEEEEEEEETTCCCEEEEBT
T ss_pred EEEEEEEECCCCcEEEEEEeCCCCCeEEecc
Confidence 455566777 69999999999999998653
No 79
>2d11_E Na(+)/H(+) exchange regulatory cofactor NHE-RF2; protein-peptide complex, cell adhesion; 2.81A {Mus musculus}
Probab=23.06 E-value=12 Score=20.76 Aligned_cols=12 Identities=8% Similarity=0.196 Sum_probs=8.4
Q ss_pred eeEeCeeeeccc
Q 038652 107 GVCRNYKWLETL 118 (174)
Q Consensus 107 ~~c~~mdWL~~~ 118 (174)
...|.|||..++
T Consensus 11 krap~MDw~kk~ 22 (28)
T 2d11_E 11 KRAPQMDWNRKR 22 (28)
T ss_pred ccCCcccHHHHH
Confidence 345669998775
No 80
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=22.79 E-value=67 Score=27.48 Aligned_cols=28 Identities=29% Similarity=0.420 Sum_probs=23.6
Q ss_pred eEEEEEEEC--CEEEEEEeecCCCCccccH
Q 038652 50 TFNVLGFVG--EHKVTIVIDSGASPNFISA 77 (174)
Q Consensus 50 tmrl~g~I~--~~~v~~LIDSGSThnFIs~ 77 (174)
...+...|+ .+++.++||+||+.-++..
T Consensus 75 ~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~ 104 (455)
T 3lpj_A 75 GYYVEMTVGSPPQTLNILVDTGSSNFAVGA 104 (455)
T ss_dssp EEEEEEEETTTTEEEEEEEETTCCCEEEEC
T ss_pred EEEEEEEECCCCeEEEEEEcCCCcceEEec
Confidence 466677888 7999999999999999854
No 81
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=22.78 E-value=67 Score=28.03 Aligned_cols=30 Identities=20% Similarity=0.350 Sum_probs=24.6
Q ss_pred CeEEEEEEEC--CEEEEEEeecCCCCccccHH
Q 038652 49 KTFNVLGFVG--EHKVTIVIDSGASPNFISAE 78 (174)
Q Consensus 49 ~tmrl~g~I~--~~~v~~LIDSGSThnFIs~~ 78 (174)
........|+ .+++.+++|+||+.-++...
T Consensus 138 ~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~ 169 (453)
T 2bju_A 138 IMFYGDAEVGDNQQPFTFILDTGSANLWVPSV 169 (453)
T ss_dssp TEEEEEEEETTTTEEEEEEEETTCCCEEEEBT
T ss_pred CEEEEEEEECCCCeEEEEEEECCCcceEEecc
Confidence 3466667788 89999999999999998654
No 82
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=22.74 E-value=53 Score=26.75 Aligned_cols=24 Identities=17% Similarity=0.281 Sum_probs=21.0
Q ss_pred EEEEEeecCCCCccccHHHHhhcC
Q 038652 61 KVTIVIDSGASPNFISAEQVDELK 84 (174)
Q Consensus 61 ~v~~LIDSGSThnFIs~~~v~~l~ 84 (174)
...++||||.|-.++.+++++++.
T Consensus 212 ~~~aiiDSGTt~~~lP~~~~~~l~ 235 (329)
T 1oew_A 212 SIDGIADTGTTLLYLPATVVSAYW 235 (329)
T ss_dssp EEEEEECTTCCSEEECHHHHHHHH
T ss_pred CceEEEeCCCCCEECCHHHHHHHH
Confidence 457999999999999999988764
No 83
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=22.26 E-value=64 Score=28.07 Aligned_cols=28 Identities=11% Similarity=0.118 Sum_probs=23.2
Q ss_pred EEEEEEEC--CEEEEEEeecCCCCccccHH
Q 038652 51 FNVLGFVG--EHKVTIVIDSGASPNFISAE 78 (174)
Q Consensus 51 mrl~g~I~--~~~v~~LIDSGSThnFIs~~ 78 (174)
......|+ .+++.+++|+||+.-++...
T Consensus 139 Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~ 168 (451)
T 3qvc_A 139 SFGEAKLGDNGQKFNFLFHTASSNVWVPSI 168 (451)
T ss_dssp EEEEEEETTTTEEEEEEEESSBCSEEEEBT
T ss_pred EEEEEEECCCCcEEEEEEcCCCccEEEecC
Confidence 55566777 79999999999999999754
No 84
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=22.09 E-value=41 Score=28.85 Aligned_cols=33 Identities=9% Similarity=0.210 Sum_probs=24.1
Q ss_pred EEEEE-EECCEEE----------EEEeecCCCCccccHHHHhhc
Q 038652 51 FNVLG-FVGEHKV----------TIVIDSGASPNFISAEQVDEL 83 (174)
Q Consensus 51 mrl~g-~I~~~~v----------~~LIDSGSThnFIs~~~v~~l 83 (174)
+.+.+ .|+++.+ .++||||.|..++..++++.+
T Consensus 263 v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~i 306 (455)
T 3lpj_A 263 VIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAA 306 (455)
T ss_dssp CCEEEEEETTEECCCCGGGGGSSCEEECTTSSSEEEEHHHHHHH
T ss_pred EEEeEEEECCEEccccccccCCCeEEEECCCcceeCCHHHHHHH
Confidence 44444 5677765 389999999999987776553
No 85
>1v5t_A 8430435I17RIK protein; hypothetical protein, ubiquitin-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.15.1.1 PDB: 2kx3_A
Probab=21.47 E-value=63 Score=21.34 Aligned_cols=45 Identities=2% Similarity=-0.078 Sum_probs=35.7
Q ss_pred CCCCeEEEEEEECCEEEEE-EeecCCCCccccHHHHhhcCCccccc
Q 038652 46 TLPKTFNVLGFVGEHKVTI-VIDSGASPNFISAEQVDELKLPISEA 90 (174)
Q Consensus 46 ~~~~tmrl~g~I~~~~v~~-LIDSGSThnFIs~~~v~~l~l~~~~~ 90 (174)
....+|++..+.+++...+ =+|..+|-.=+-..+..+.++|....
T Consensus 3 ~~~~~m~i~Vk~~g~~~~i~~v~~~~TV~~lK~~I~~~~gip~~~Q 48 (90)
T 1v5t_A 3 SGSSGLPIIVKWGGQEYSVTTLSEDDTVLDLKQFLKTLTGVLPERQ 48 (90)
T ss_dssp CCCCSCCEEEEETTEEEEECSCCSSSBHHHHHHHHHHHTCCCTTTC
T ss_pred CCCceEEEEEEECCEEEEEEEeCCCCCHHHHHHHHHHHHCcCHHHe
Confidence 3455688888788888877 78888998889999999999876544
No 86
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=20.89 E-value=38 Score=28.33 Aligned_cols=34 Identities=9% Similarity=0.203 Sum_probs=24.9
Q ss_pred eEEEEE-EECCEEE----------EEEeecCCCCccccHHHHhhc
Q 038652 50 TFNVLG-FVGEHKV----------TIVIDSGASPNFISAEQVDEL 83 (174)
Q Consensus 50 tmrl~g-~I~~~~v----------~~LIDSGSThnFIs~~~v~~l 83 (174)
.+.+.+ .|+++.+ .++||||+|..++..++++.+
T Consensus 216 ~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~i 260 (402)
T 3vf3_A 216 EVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAA 260 (402)
T ss_dssp EECEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEEHHHHHHH
T ss_pred EEEEeEEEECCEEecccccccCCCeEEEECCCCcccCCHHHHHHH
Confidence 345554 5677764 489999999999987776654
No 87
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=20.72 E-value=39 Score=28.27 Aligned_cols=33 Identities=9% Similarity=0.210 Sum_probs=23.6
Q ss_pred EEEEE-EECCEEE----------EEEeecCCCCccccHHHHhhc
Q 038652 51 FNVLG-FVGEHKV----------TIVIDSGASPNFISAEQVDEL 83 (174)
Q Consensus 51 mrl~g-~I~~~~v----------~~LIDSGSThnFIs~~~v~~l 83 (174)
+.+.+ .|+++.+ .++||||+|..++.+++++++
T Consensus 210 v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l 253 (395)
T 2qp8_A 210 VIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAA 253 (395)
T ss_dssp CCEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEEHHHHHHH
T ss_pred EEEEEEEECCEEcccCccccCCceEEEEcCCCcEecCHHHHHHH
Confidence 34443 5677654 489999999999988776643
No 88
>1o8b_A Ribose 5-phosphate isomerase; RPIA, PSI, protein ST initiative, MCSG, midwest center for structural genomics; HET: ABF; 1.25A {Escherichia coli} SCOP: c.124.1.4 d.58.40.1 PDB: 1lkz_A 1ks2_A* 3enq_A 3env_A* 3enw_A*
Probab=20.44 E-value=32 Score=27.37 Aligned_cols=20 Identities=5% Similarity=0.086 Sum_probs=7.9
Q ss_pred EEEeecCCCCccccHHHHhh
Q 038652 63 TIVIDSGASPNFISAEQVDE 82 (174)
Q Consensus 63 ~~LIDSGSThnFIs~~~v~~ 82 (174)
.+.+|||||..++-+.+.++
T Consensus 23 ~I~LdsGST~~~la~~L~~~ 42 (219)
T 1o8b_A 23 IVGVGTGSTAAHFIDALGTM 42 (219)
T ss_dssp CEEECCSCC-----------
T ss_pred EEEEcChHHHHHHHHHHhcc
Confidence 56799999999999999765
Done!