Query 038661
Match_columns 697
No_of_seqs 255 out of 829
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 23:20:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038661.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038661hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lwt_X Phosphoinositide phosph 100.0 3E-131 9E-136 1107.7 40.4 491 22-600 8-505 (505)
2 3k9o_A Ubiquitin-conjugating e 21.2 1.8E+02 0.0061 28.0 6.9 100 488-599 93-200 (201)
3 3e46_A Ubiquitin-conjugating e 11.8 5.2E+02 0.018 25.9 7.7 100 488-599 145-252 (253)
4 1nyc_A Staphostatin B, cystein 7.9 90 0.0031 26.5 0.2 16 588-603 20-35 (111)
5 2l3g_A RHO guanine nucleotide 7.2 1.7E+02 0.0057 26.3 1.7 35 482-516 92-126 (126)
6 2lyd_B Pacman protein; DCP1, X 6.9 45 0.0015 23.3 -1.7 7 296-302 25-31 (38)
7 2gu3_A YPMB protein; APC1927, 6.6 1.3E+03 0.044 20.5 10.4 58 15-74 27-86 (136)
8 3r45_C Holliday junction recog 6.5 2.5E+02 0.0086 23.0 2.2 19 320-338 26-44 (81)
9 3do6_A Formate--tetrahydrofola 6.4 5.4E+02 0.018 28.6 5.4 36 323-361 348-384 (543)
10 1ta3_B Endo-1,4-beta-xylanase; 6.3 1.1E+02 0.0037 31.6 -0.2 50 290-345 78-128 (303)
No 1
>3lwt_X Phosphoinositide phosphatase SAC1; SAC3/FIG4, lipid metabol endoplasmic reticulum, hydrolase, membrane, transmembrane; 1.96A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-131 Score=1107.68 Aligned_cols=491 Identities=27% Similarity=0.494 Sum_probs=380.1
Q ss_pred EEEeCCEEEEEeecCCCCceEEEEEeCCCCCccceecCCccccHHHHHHHHHhhhcCccccCCceeeeEEEEEEEEEEEc
Q 038661 22 LYETRSMFYMIGRDKSRTHWRVLKIDRLDPLELNIREDSTTYTERECSELLRRIHEGNLATGGLKFVTTCYGIVGFIKFL 101 (697)
Q Consensus 22 Lyet~~~fyi~~~~~~~~~~~~L~IdR~~~~~l~i~ed~~~y~~~e~~~ll~~i~~~~~~~g~l~~~~~~~GIlG~I~~~ 101 (697)
.-+||++|||+|.+.+...-.+|.|||.++ ++.+.+... ++ .. ..+++|+||||+|+|.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~i~r~~~-~~~~~~~~~-------------~~-----~~--~~~~~i~GilG~i~l~ 66 (505)
T 3lwt_X 8 YVQNADGIFFKLAEGKGTNDAVIHLANQDQ-GVRVLGAEE-------------FP-----VQ--GEVVKIASLMGFIKLK 66 (505)
T ss_dssp EEEETTEEEEEESSCCSSCCCEEEEETTTC-CEEEECGGG-------------SC-----SS--SCCEEESEEEEEEEET
T ss_pred EEECCCEEEEEECCCCCCCcceEEEEcCCC-eEEeccccc-------------CC-----Cc--CceeEEEEEEEEEEEC
Confidence 346999999999764221236999999998 466543211 11 11 1277899999999999
Q ss_pred CceEEEEEeceeEeeeeCCceEEEEeeeeEEecCCCCccccccCchhHHHHHHHhhccCCCCceEEeccccccccccccc
Q 038661 102 GPYYMLIITKRRRIGAICGHNVYAVSKCEMIPLPNSSVQSSITNSKNENRYKKLLCTVDLTKDFFFSYSYHIMRSLQKNF 181 (697)
Q Consensus 102 ~~~YLlvIT~~~~Vg~i~gh~Iy~I~~~~~ipl~~~~~~~~~~~~~dE~ry~kll~~~~lt~~FYFSytyDLT~slQ~~~ 181 (697)
+++||+|||+++.||.|+||.||+|++++|||++.+. ..+++|++|+++|+.++++++|||||+||||+++|++.
T Consensus 67 ~~~YlivIT~~~~vg~i~gh~Iy~I~~~~~ipl~~~~-----~~~~~E~~yl~ll~~~l~s~~FYfS~~yDLT~slQ~~~ 141 (505)
T 3lwt_X 67 LNRYAIIANTVEETGRFNGHVFYRVLQHSIVSTKFNS-----RIDSEEAEYIKLLELHLKNSTFYFSYTYDLTNSLQRNE 141 (505)
T ss_dssp TEEEEEEEEEEEEEEEETTEEEEEEEEEEEEESCTTC-----CCCHHHHHHHHHHHHHHHHCCCEECSSSCTTSCHHHHH
T ss_pred CCcEEEEEEccEEEEEECCeEEEEEEEEEEEEecCcc-----ccChhHHHHHHHHHHHhcCCCEEEeCCcCCCcchhhcc
Confidence 9999999999999999999999999999999998542 24689999999999999999999999999999999986
Q ss_pred cCCC-CCCCCcccccccchhhHHHHHhhc----cCCceeeEeeeeeeEeeEEEEecceeEEEEEEEEeccCCCccccccc
Q 038661 182 YDNQ-TGQVVYETMFVWNEFLTRGIRNHL----QNTLWTVALVYGFFKQATLSVSGRDFKLTLIARRSRHYAGTRYLKRG 256 (697)
Q Consensus 182 ~~~~-~~~~~~d~~F~WN~~L~~~~~~~~----~~~~w~~plI~Gfv~~~~~~i~g~~~~ltLISRRS~~raGTRy~~RG 256 (697)
.... ..|..+|++|+||++|+++|++.. +...|++|||||||++..+.++|+++.+||||||||+||||||++||
T Consensus 142 ~~~~~~~~~~~d~~F~WN~~l~~~l~~~~~~~~~~~~~~~piI~Gfv~~~~~~~~~~~~~~tLISRRS~~raGtRy~~RG 221 (505)
T 3lwt_X 142 KVGPAASWKTADERFFWNHYLTEDLRNFAHQDPRIDSFIQPVIYGYAKTVDAVLNATPIVLGLITRRSIFRAGTRYFRRG 221 (505)
T ss_dssp HHCSCCCGGGSCTTTCTTTGGGHHHHHHHTTCGGGGGGCCCCBSSEEEEEEEEETTEEEEEEEEEEECCCCCSSSCCSSS
T ss_pred ccCccccccCCCCceechHHHHHHHHHhcccCcchhhhhhHhhcCceEEEEEEECCceEEEEEEEEEecccCCccccccC
Confidence 5432 346678999999999999998643 23589999999999999999999999999999999999999999999
Q ss_pred CCCCCCcceeeeeeEEEEecCCCCCcceEEEEEEeecCcceeeeecCCCCCcccceEecCCCCcHHHHHHHHHHHHHhhC
Q 038661 257 VNEKGRVANDVETEQIVFEEVPEGFPMQISSVVQNRGSIPLFWSQETSRLNIKPDIILSKKDQNYEATRLHFENLAKRYG 336 (697)
Q Consensus 257 id~~G~VANfVETEQIv~~~~~~~~~~~i~SfVQiRGSIPlfWsQ~~~~l~~KP~I~l~~~d~~~~a~~~HF~~L~~rYG 336 (697)
||++|+|||||||||||+.+...+.+..++||||+||||||||+|.+ .+.+||+|.+. +++++||++||++|.++||
T Consensus 222 idd~G~VANfVETEqIv~~~~~~~~~~~~~SfvQiRGSVPlfW~Q~~-~l~~kP~i~i~--~~~~~a~~kHF~~L~~~YG 298 (505)
T 3lwt_X 222 VDKDGNVGNFNETEQILLAENPESEKIHVFSFLQTRGSVPIYWAEIN-NLKYKPNLVLG--ENSLDATKKHFDQQKELYG 298 (505)
T ss_dssp BCTTSCCSCEEEEEEEEEEECTTTCCEEEEEEEEEEECCCSBSCCCC-CSSSCCCCCCC--HHHHHHHHHHHHHHHHHHS
T ss_pred cCCCCCccceeeEEEEEEeCCCCCCCccEEEEEEeccccCceeeecC-CcCcCCCeeec--CchHHHHHHHHHHHHHHhC
Confidence 99999999999999999987644334589999999999999999975 68899999885 4599999999999999999
Q ss_pred CcEEEEEcccccCCCChhhHHHHHHHHHHHHHhhcCCCCCCeeEEEeeccccccc-CcccHHHHHHHHHHHHhhhcccee
Q 038661 337 NPIIILNLIKTQEKKPRESILRQEFANAIDFINKDLSEENRLRFLHWDLHKHSRS-KATNVLLLLGKVATYALTLTGFFY 415 (697)
Q Consensus 337 ~pi~ivNLl~~~ekk~~E~~L~~~f~~~i~~ln~~l~~~~~i~y~~fDfh~~~k~-k~~nvl~~L~~ia~~~l~~~gff~ 415 (697)
. ++|||||++ |++|.+|+++|+++|+++|. ++|+|++||||++||+ +..++..+++.+++..++..|||+
T Consensus 299 ~-~~iVNLl~~---k~~E~~L~~~y~~~v~~l~~-----~~i~y~~fDfh~~~k~~~~~~v~~ll~~l~~~~~~~~g~f~ 369 (505)
T 3lwt_X 299 D-NYLVNLVNQ---KGHELPVKEGYESVVHALND-----PKIHYVYFDFHHECRKMQWHRVKLLIDHLEKLGLSNEDFFH 369 (505)
T ss_dssp E-EEEEEECCC---SSCCCHHHHHHHHHHHHHCC-----TTEEEEEECCCSSTTTHHHHHHHHHHHHHHHHTCCTTCSEE
T ss_pred C-cEEEecccC---CCchhHHHHHHHHHHHHhcc-----cCCceEEecchHhhhccchhHHHHHHHHHHHhcccccCceE
Confidence 7 568999986 45699999999999999984 5899999999999998 456676777888877788889998
Q ss_pred eecCCCCCcccccccccccccCCCCCCCCCCCCCCcchhhhhhhcccCCCCCCCCCCCCCCcceeeeEEEeecccccccc
Q 038661 416 CRVTPSLRPEELINSTSSENVNNGNLSPQNHCSNDIEDADKLERNLSGDNNVANGNHPIRLPMLQKGVLRTNCIDCLDRT 495 (697)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~Q~GV~RtNCiDCLDRT 495 (697)
....+. | ...++...|+||||||||||||||
T Consensus 370 ~~~~~~------------------------------------------------g-~~~~~~~~Q~GV~RtNCiDCLDRT 400 (505)
T 3lwt_X 370 KVIDSN------------------------------------------------G-NTVEIVNEQHSVVRTNCMDCLDRT 400 (505)
T ss_dssp EEECTT------------------------------------------------S-CEEEEEECCCEEEEEETTSCHHHH
T ss_pred eeccCC------------------------------------------------C-CccceeeccceEEEEecccccccc
Confidence 643211 0 012578899999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCCC-CCCCchHHHHHHHHHHHhhhHhHhhccCCccccccceeeccccccccchhHHH
Q 038661 496 NVAQYAYGLAALGRQLHALGVIDNPK-IDLDAPLADDLMGFYERMGDTLAHQYGGSAAHNKIFSERRGQWRAATQSQEFF 574 (697)
Q Consensus 496 Nv~Q~~i~~~~L~~qL~~lGi~~~~~-~~~~~~~~~~l~~lw~~~GD~IS~qYaGT~Alk~~ft~r~gk~~~~~~~~D~~ 574 (697)
||||++||+.||++||+++|++..+. ++.++++...|++||+||||+||+|||||+|+|++|| |+|||+++|+++|++
T Consensus 401 NvvQ~~i~~~~L~~qL~~lgi~~~~~~~~~~~~~~~~f~~lWadnGD~iS~qYaGT~Alkt~~t-R~gk~~~~g~l~D~~ 479 (505)
T 3lwt_X 401 NVVQSVLAQWVLQKEFESADVVATGSTWEDNAPLLTSYQNLWADNADAVSVAYSGTGALKTDFT-RTGKRTRLGAFNDFL 479 (505)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSCTTCCGGGCHHHHHHHHHHHHHHHHHHTTTCCCCC-----------------------
T ss_pred hHHHHHHHHHHHHHHHHHcCCCCCccccccCHHHHHHHHHHHHHhhHHHHHHhcCCccccCcee-eceeechhhhHHHHH
Confidence 99999999999999999999987654 4567889999999999999999999999999999999 899999999999999
Q ss_pred HHHHHHHhhccCChhhHHHHHHHhcC
Q 038661 575 RTLQRYYSNAYMDAEKQDAINVFLGH 600 (697)
Q Consensus 575 ~Sl~Ryy~NnF~D~~kQdaIdLfLG~ 600 (697)
+|++|||+|||.|+.||+|||||||+
T Consensus 480 ~S~~Ryy~NnF~D~~rQ~aidl~LGn 505 (505)
T 3lwt_X 480 NSASRYYQNNWTDGPRQDSYDLFLGG 505 (505)
T ss_dssp --------------------------
T ss_pred HhHhheeecccCcHHHHHHHHHHcCC
Confidence 99999999999999999999999996
No 2
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=21.24 E-value=1.8e+02 Score=27.99 Aligned_cols=100 Identities=19% Similarity=0.272 Sum_probs=59.1
Q ss_pred ccccccc-----ccHHHHHHHHHHHHHHHHHcCCCCCCCCCCCchHHHHHH---HHHHHhhhHhHhhccCCcccccccee
Q 038661 488 CIDCLDR-----TNVAQYAYGLAALGRQLHALGVIDNPKIDLDAPLADDLM---GFYERMGDTLAHQYGGSAAHNKIFSE 559 (697)
Q Consensus 488 CiDCLDR-----TNv~Q~~i~~~~L~~qL~~lGi~~~~~~~~~~~~~~~l~---~lw~~~GD~IS~qYaGT~Alk~~ft~ 559 (697)
|+|-|.. .++-+-+++...| |. ...+.-..+.+++..++ ..|....-.....||+..+....+-.
T Consensus 93 Cl~iL~~~W~p~~~i~~vL~~i~~l---l~----~p~p~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~~~~~~~~ee 165 (201)
T 3k9o_A 93 CLDILKDQWAAAMTLRTVLLSLQAL---LA----AAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGAPVSSPEYTK 165 (201)
T ss_dssp CCGGGTTTCCTTCCHHHHHHHHHHH---HH----SCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHH
T ss_pred eCcccccCCCCCCCHHHHHHHHHHH---hc----CCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcccccccchhHH
Confidence 8888842 2455544443322 21 12333345555666554 46777788888999998776555544
Q ss_pred eccccccccchhHHHHHHHHHHhhccCChhhHHHHHHHhc
Q 038661 560 RRGQWRAATQSQEFFRTLQRYYSNAYMDAEKQDAINVFLG 599 (697)
Q Consensus 560 r~gk~~~~~~~~D~~~Sl~Ryy~NnF~D~~kQdaIdLfLG 599 (697)
+..+..-+|..++-...+-+..++ .-..|++.+++
T Consensus 166 kV~~l~~MGf~~~~a~~AL~~~~w-----d~~~A~e~L~~ 200 (201)
T 3k9o_A 166 KIENLCAMGFDRNAVIVALSSKSW-----DVETATELLLS 200 (201)
T ss_dssp HHHHHHTTTCCHHHHHHHHHHTTT-----CHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHcCC-----CHHHHHHHHhc
Confidence 455566667777766665555433 45577777765
No 3
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=11.84 E-value=5.2e+02 Score=25.87 Aligned_cols=100 Identities=19% Similarity=0.277 Sum_probs=55.7
Q ss_pred ccccccc-----ccHHHHHHHHHHHHHHHHHcCCCCCCCCCCCchHHHHHH---HHHHHhhhHhHhhccCCcccccccee
Q 038661 488 CIDCLDR-----TNVAQYAYGLAALGRQLHALGVIDNPKIDLDAPLADDLM---GFYERMGDTLAHQYGGSAAHNKIFSE 559 (697)
Q Consensus 488 CiDCLDR-----TNv~Q~~i~~~~L~~qL~~lGi~~~~~~~~~~~~~~~l~---~lw~~~GD~IS~qYaGT~Alk~~ft~ 559 (697)
|+|-|.. .++-+-+++...| |. ...++-.++.+++..++ ..|....-.....||+.......|..
T Consensus 145 CL~iL~~~WsP~~ti~~vL~sI~~l---l~----~pnp~~Pln~eaa~l~~~d~~~f~~~ar~~t~~yA~~~~~~~~~~~ 217 (253)
T 3e46_A 145 CLDILKDQWAAAMTLRTVLLSLQAL---LA----AAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGAPVSSPEYTK 217 (253)
T ss_dssp CCGGGTTCCCTTCCHHHHHHHHHHH---HH----SCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCCSCCCHHHHH
T ss_pred ecccccCCCCCCCCHHHHHHHHHHH---hc----CCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHhcccccCcchHHH
Confidence 8888832 3454444443322 21 12233334555665554 46777778888999998765555543
Q ss_pred eccccccccchhHHHHHHHHHHhhccCChhhHHHHHHHhc
Q 038661 560 RRGQWRAATQSQEFFRTLQRYYSNAYMDAEKQDAINVFLG 599 (697)
Q Consensus 560 r~gk~~~~~~~~D~~~Sl~Ryy~NnF~D~~kQdaIdLfLG 599 (697)
+..+..-+|..++....+-+.. +.....|++.++|
T Consensus 218 ~v~~l~~mgf~~~~~~~al~~~-----nWd~~~A~e~L~~ 252 (253)
T 3e46_A 218 KIENLCAAGFDRNAVIVALSSK-----SWDVETATELLLS 252 (253)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHT-----TTCHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHc-----CCCHHHHHHHHhc
Confidence 4444555555565555433333 4456677777765
No 4
>1nyc_A Staphostatin B, cysteine protease inhibitor; SSPC, hydrolase inhibitor; 1.40A {Staphylococcus aureus subsp} SCOP: b.61.2.2 PDB: 1pxv_C 1y4h_C 1qwx_A
Probab=7.89 E-value=90 Score=26.47 Aligned_cols=16 Identities=31% Similarity=0.627 Sum_probs=13.4
Q ss_pred hhhHHHHHHHhcCcCC
Q 038661 588 AEKQDAINVFLGHFQP 603 (697)
Q Consensus 588 ~~kQdaIdLfLG~~~p 603 (697)
..+|+.|+||.|++.-
T Consensus 20 ~~~q~~i~lfignw~n 35 (111)
T 1nyc_A 20 HLEQTNINLFIGNWSN 35 (111)
T ss_dssp HHHHHHHHTTCEEEEE
T ss_pred ecccceEEEEEeccCC
Confidence 3589999999999854
No 5
>2l3g_A RHO guanine nucleotide exchange factor 7; structural genomics, northeast structural genomics consortiu PSI-biology, calponin-homology domain; NMR {Homo sapiens}
Probab=7.21 E-value=1.7e+02 Score=26.26 Aligned_cols=35 Identities=14% Similarity=0.183 Sum_probs=30.0
Q ss_pred eEEEeecccccccccHHHHHHHHHHHHHHHHHcCC
Q 038661 482 GVLRTNCIDCLDRTNVAQYAYGLAALGRQLHALGV 516 (697)
Q Consensus 482 GV~RtNCiDCLDRTNv~Q~~i~~~~L~~qL~~lGi 516 (697)
|+...--.|-.++.|..|-+.+..+|...++++|+
T Consensus 92 g~~lF~t~DL~e~kn~~~V~~cL~aL~~~~~~~G~ 126 (126)
T 2l3g_A 92 RLETFDANDLYQGQNFNKVLSSLVTLNKVTADIGL 126 (126)
T ss_dssp CCCCCCHHHHHTTSCHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCccCHHHHHhCCCHHHHHHHHHHHHHHHHHccC
Confidence 44556668999999999999999999999998885
No 6
>2lyd_B Pacman protein; DCP1, XRN1, transcription-protein binding complex; NMR {Drosophila melanogaster}
Probab=6.88 E-value=45 Score=23.29 Aligned_cols=7 Identities=86% Similarity=1.868 Sum_probs=4.5
Q ss_pred ceeeeec
Q 038661 296 PLFWSQE 302 (697)
Q Consensus 296 PlfWsQ~ 302 (697)
||||.++
T Consensus 25 plfwq~e 31 (38)
T 2lyd_B 25 PLFWQQE 31 (38)
T ss_dssp CHHHHHH
T ss_pred chHHHHH
Confidence 6777654
No 7
>2gu3_A YPMB protein; APC1927, structural genomics, PSI, protein structure initiat midwest center for structural genomics, MCSG, unknown funct; 1.74A {Bacillus subtilis subsp} SCOP: d.17.1.6 d.17.1.6
Probab=6.58 E-value=1.3e+03 Score=20.55 Aligned_cols=58 Identities=14% Similarity=0.279 Sum_probs=35.3
Q ss_pred CcceeEEEEEeCCEEEEE-eecCCCCceEEEEEeCCCCCccc-eecCCccccHHHHHHHHHh
Q 038661 15 PCMQKFRLYETRSMFYMI-GRDKSRTHWRVLKIDRLDPLELN-IREDSTTYTERECSELLRR 74 (697)
Q Consensus 15 ~~~~~~~Lyet~~~fyi~-~~~~~~~~~~~L~IdR~~~~~l~-i~ed~~~y~~~e~~~ll~~ 74 (697)
...++|..|--...||++ |.|.... .+..+-..++..+. +..-..-.|++++..++..
T Consensus 27 ~~v~~~~~y~g~~tYyvv~G~~~~g~--~~~V~Vp~~~~~v~~v~~~~~GiSe~~a~~~v~~ 86 (136)
T 2gu3_A 27 AHVDQVETFVGKEKYYVVKGTDKKGT--ALYVWVPADKKAKILSKEAKEGISEDKAAKIIKD 86 (136)
T ss_dssp EEEEEEEEEESSSEEEEEEEEETTCC--EEEEEEESSTTSCCEEEEGGGSCCHHHHHHHHHH
T ss_pred eEEeeEEEECCceEEEEEEEEcCCCC--EEEEEEECCCCeEEEEEEHhhCCCHHHHHHHHHH
Confidence 467888888888777776 6666555 44444444333444 3322333688888776643
No 8
>3r45_C Holliday junction recognition protein; histone fold, centromere, CENP-A, histone chaperone, hjurp; 2.60A {Homo sapiens}
Probab=6.53 E-value=2.5e+02 Score=23.01 Aligned_cols=19 Identities=16% Similarity=0.419 Sum_probs=15.9
Q ss_pred cHHHHHHHHHHHHHhhCCc
Q 038661 320 NYEATRLHFENLAKRYGNP 338 (697)
Q Consensus 320 ~~~a~~~HF~~L~~rYG~p 338 (697)
+-.-|++|+..|+++|+.|
T Consensus 26 sr~RFQ~~Mq~lieKYn~P 44 (81)
T 3r45_C 26 SRRRFQRRMQRLIEKYNQP 44 (81)
T ss_dssp HHHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHHHHHcCCC
Confidence 4456899999999999876
No 9
>3do6_A Formate--tetrahydrofolate ligase; TM1766, putative formyltetrahydrofolate synthetase, structural genomics; HET: MSE; 1.85A {Thermotoga maritima} SCOP: c.37.1.0
Probab=6.39 E-value=5.4e+02 Score=28.64 Aligned_cols=36 Identities=31% Similarity=0.443 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHhhCCc-EEEEEcccccCCCChhhHHHHHH
Q 038661 323 ATRLHFENLAKRYGNP-IIILNLIKTQEKKPRESILRQEF 361 (697)
Q Consensus 323 a~~~HF~~L~~rYG~p-i~ivNLl~~~ekk~~E~~L~~~f 361 (697)
-..+|.+++.+ ||-| |++||--.+- ...|..+-+++
T Consensus 348 NL~kHIen~~~-fGvpvVVaiN~F~tD--T~aEi~~v~~~ 384 (543)
T 3do6_A 348 NLRVHVENLRK-FNLPVVVALNRFSTD--TEKEIAYVVKE 384 (543)
T ss_dssp HHHHHHHHHHH-TTCCEEEEEECCTTC--CHHHHHHHHHH
T ss_pred HHHHHHHHHHH-cCCCeEEEEeCCCCC--CHHHHHHHHHH
Confidence 35689999865 9998 4568976541 22355444444
No 10
>1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3
Probab=6.28 E-value=1.1e+02 Score=31.57 Aligned_cols=50 Identities=16% Similarity=0.280 Sum_probs=29.5
Q ss_pred EeecCcceeee-ecCCCCCcccceEecCCCCcHHHHHHHHHHHHHhhCCcEEEEEcc
Q 038661 290 QNRGSIPLFWS-QETSRLNIKPDIILSKKDQNYEATRLHFENLAKRYGNPIIILNLI 345 (697)
Q Consensus 290 QiRGSIPlfWs-Q~~~~l~~KP~I~l~~~d~~~~a~~~HF~~L~~rYG~pi~ivNLl 345 (697)
.+||-.++ |. |.+ .+-..+ ...+...+++..|...+..||+..|..-..+
T Consensus 78 ~v~ghtlv-W~~q~P-~W~~~~----~~~~~~~~~~~~~i~~v~~rY~g~v~~Wdv~ 128 (303)
T 1ta3_B 78 KVRGHTLV-WHSQLP-SWVSSI----GDANTLRSVMTNHINEVVGRYKGKIMHWDVV 128 (303)
T ss_dssp EEEEEEEE-CSSSCC-HHHHTC----CCHHHHHHHHHHHHHHHHHHTTTSCSEEEEE
T ss_pred EEEEeecc-ccCCCC-hhhhcC----CCHHHHHHHHHHHHHHHHHhcCCcceEEEee
Confidence 47888877 64 422 221111 0112235789999999999997656544444
Done!