Query 038665
Match_columns 171
No_of_seqs 118 out of 761
Neff 4.2
Searched_HMMs 29240
Date Mon Mar 25 23:24:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038665.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038665hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1rq8_A Conserved hypothetical 100.0 1.5E-36 5E-41 229.4 12.4 94 28-124 1-94 (104)
2 1jo0_A Hypothetical protein HI 100.0 3.4E-36 1.1E-40 224.8 11.7 89 28-119 2-90 (98)
3 3ka5_A Ribosome-associated pro 43.1 75 0.0026 21.5 6.2 44 74-118 1-48 (65)
4 2p5v_A Transcriptional regulat 39.9 81 0.0028 23.0 6.3 53 23-77 2-55 (162)
5 2e6x_A TT1592, hypothetical pr 28.1 35 0.0012 23.7 2.3 17 93-109 3-19 (69)
6 2w48_A Sorbitol operon regulat 28.0 2.1E+02 0.0072 23.3 7.6 50 54-104 29-78 (315)
7 3k2t_A LMO2511 protein; lister 27.3 82 0.0028 20.6 4.0 44 75-118 2-48 (57)
8 2cmp_A G1P, terminase small su 26.0 28 0.00095 23.3 1.5 46 22-70 2-48 (63)
9 3iyg_Z T-complex protein 1 sub 25.8 1.3E+02 0.0045 26.9 6.3 66 31-106 253-327 (517)
10 1nbw_B Glycerol dehydratase re 25.7 2.1E+02 0.007 21.3 6.7 72 45-118 5-80 (117)
11 4ev0_A Transcription regulator 22.8 66 0.0023 23.4 3.2 23 57-79 174-196 (216)
12 3lyv_A Ribosome-associated fac 21.8 97 0.0033 21.0 3.6 44 74-118 2-49 (66)
13 2noc_A Putative periplasmic pr 21.1 1.6E+02 0.0056 21.1 4.9 37 83-119 49-93 (99)
14 1ass_A Thermosome; chaperonin, 20.8 2.5E+02 0.0086 21.1 6.2 66 29-107 53-121 (159)
15 1tbx_A ORF F-93, hypothetical 20.5 1.7E+02 0.0059 19.1 4.7 53 26-80 3-60 (99)
No 1
>1rq8_A Conserved hypothetical protein; structural genomics, SAV1595, YHBY, UPF0044, unknown function; NMR {Staphylococcus aureus} SCOP: d.68.4.1
Probab=100.00 E-value=1.5e-36 Score=229.40 Aligned_cols=94 Identities=32% Similarity=0.503 Sum_probs=90.2
Q ss_pred CCCHHHHHHHHHhhhhcCCcccceecCCCCCCHHHHHHHHHHHHhCCeEeEEEcCCChhhHHHHHHHHHHHhCCeEEeEE
Q 038665 28 KLTVKEKKELASYAHSLGKKLKCQLVGKSGVTDGVVTSFIETLEANELLKIKIHRTCPGELEDVVKQLEEATGSAVVSQI 107 (171)
Q Consensus 28 ~LT~kqRk~LR~~AH~LkP~i~~V~IGK~GLTe~VI~eI~~aL~~hELIKVKil~n~~~d~~e~ae~La~~tgaevVq~I 107 (171)
|||++||+|||++||+|+|+ |+|||+||||+|+++|+++|++||||||+|+++|++|++++|++||+.|||++||+|
T Consensus 1 mLt~kqr~~LR~~ah~Lkpv---v~IGK~GlTe~vi~ei~~aL~~hELIKVkvl~~~~~d~~e~a~~la~~t~a~vVq~I 77 (104)
T 1rq8_A 1 MLTGKQKRYLRSLAHNIDPI---FQIGKGGINENMIKQIDDTLENRELIKVHVLQNNFDDKKELAETLSEATRSELVQVI 77 (104)
T ss_dssp CCCHHHHHHHHHHTTSSCCS---CEECSSSCCHHHHHHHHHHHHHSSEEEEEECCCCHHHHHHHHHHHHHHHTEEEEEEE
T ss_pred CCCHHHHHHHHHHhcCCCCe---EEECCCCCCHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHHHHHHhCCEEEEEE
Confidence 69999999999999999996 699999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEEEcCCCCccchH
Q 038665 108 GQTVIIYRPSLTRMKLE 124 (171)
Q Consensus 108 G~t~ILYR~s~~~~k~~ 124 (171)
|+++||||+++++++++
T Consensus 78 G~~~VLYR~~~~~~~i~ 94 (104)
T 1rq8_A 78 GSMIVIYRESKENKEIE 94 (104)
T ss_dssp TTEEEEEECCCSCCSCC
T ss_pred CCEEEEEeCCCCCCcee
Confidence 99999999998777653
No 2
>1jo0_A Hypothetical protein HI1333; structural genomics, YHBY_HAEI structure 2 function project, S2F, unknown function; 1.37A {Haemophilus influenzae} SCOP: d.68.4.1 PDB: 1ln4_A
Probab=100.00 E-value=3.4e-36 Score=224.84 Aligned_cols=89 Identities=29% Similarity=0.496 Sum_probs=86.7
Q ss_pred CCCHHHHHHHHHhhhhcCCcccceecCCCCCCHHHHHHHHHHHHhCCeEeEEEcCCChhhHHHHHHHHHHHhCCeEEeEE
Q 038665 28 KLTVKEKKELASYAHSLGKKLKCQLVGKSGVTDGVVTSFIETLEANELLKIKIHRTCPGELEDVVKQLEEATGSAVVSQI 107 (171)
Q Consensus 28 ~LT~kqRk~LR~~AH~LkP~i~~V~IGK~GLTe~VI~eI~~aL~~hELIKVKil~n~~~d~~e~ae~La~~tgaevVq~I 107 (171)
+||++||+|||++||+|+|+ |+|||+||||+|+++|+++|++||||||+|+++|++|++++|++||+.|||++||+|
T Consensus 2 ~Lt~kqr~~Lr~~ah~l~pv---v~IGk~GlT~~vi~ei~~aL~~~ELIKVkvl~~~~~~~~e~a~~la~~t~a~~Vq~I 78 (98)
T 1jo0_A 2 TLSTKQKQFLKGLAHHLNPV---VMLGGNGLTEGVLAEIENALNHHELIKVKVAGADRETKQLIINAIVRETKAAQVQTI 78 (98)
T ss_dssp CCCHHHHHHHHHHHTTBCCS---EEECTTCSCHHHHHHHHHHHHHHSEEEEEETTCCHHHHHHHHHHHHHHHCCEEEEEE
T ss_pred CCCHHHHHHHHHHhcCCCCe---EEECCCCCCHHHHHHHHHHHHHCCeEEEEEeCCCHHHHHHHHHHHHHHhCCEEEEEE
Confidence 69999999999999999996 699999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEEEcCCCC
Q 038665 108 GQTVIIYRPSLT 119 (171)
Q Consensus 108 G~t~ILYR~s~~ 119 (171)
|+++||||++++
T Consensus 79 G~~~vLyR~~~~ 90 (98)
T 1jo0_A 79 GHILVLYRPSEE 90 (98)
T ss_dssp TTEEEEECCCSS
T ss_pred CCEEEEEccCCC
Confidence 999999999855
No 3
>3ka5_A Ribosome-associated protein Y (PSRP-1); structural genomics, PSI-2, protein structure initiative; 1.80A {Clostridium acetobutylicum}
Probab=43.09 E-value=75 Score=21.51 Aligned_cols=44 Identities=25% Similarity=0.299 Sum_probs=31.8
Q ss_pred CeEeEEEcCCChhhHHHHHHHHHHHhCCeE-EeEE---ccEEEEEcCCC
Q 038665 74 ELLKIKIHRTCPGELEDVVKQLEEATGSAV-VSQI---GQTVIIYRPSL 118 (171)
Q Consensus 74 ELIKVKil~n~~~d~~e~ae~La~~tgaev-Vq~I---G~t~ILYR~s~ 118 (171)
++|+.|-..-.+.+.++++.+++-. |..+ |-.= |.+-|+||...
T Consensus 1 ~iVr~K~~~~kpMsveEAv~qmel~-gh~F~vF~n~etg~~nVVYRR~d 48 (65)
T 3ka5_A 1 EIVKTKRFAIKPMSEEEAVLEMELL-GHNFFVFQNGDSNEVNVVYKRKD 48 (65)
T ss_dssp CEEEEECSCCSCBCHHHHHHHHHHH-TCSEEEEEETTTTEEEEEEECTT
T ss_pred CeEEEEeecCCCCCHHHHHHHHHhC-CCcEEEEEeCCCCCEEEEEEeCC
Confidence 4678887777889999999999875 4444 3332 67788888754
No 4
>2p5v_A Transcriptional regulator, LRP/ASNC family; NMB0573, structu genomics; 1.99A {Neisseria meningitidis} PDB: 2p6s_A 2p6t_A
Probab=39.93 E-value=81 Score=23.00 Aligned_cols=53 Identities=13% Similarity=0.161 Sum_probs=39.6
Q ss_pred CCCCCCCCHHHHHHHHHhhhhcCCcccceecC-CCCCCHHHHHHHHHHHHhCCeEe
Q 038665 23 PLPLPKLTVKEKKELASYAHSLGKKLKCQLVG-KSGVTDGVVTSFIETLEANELLK 77 (171)
Q Consensus 23 ~~~~~~LT~kqRk~LR~~AH~LkP~i~~V~IG-K~GLTe~VI~eI~~aL~~hELIK 77 (171)
+++.+.|+..+++-|..+..+-...+ --|+ .-|++++.+...-..|+..++|+
T Consensus 2 ~~~~~~ld~~~~~il~~L~~~~~~s~--~ela~~lg~s~~tv~~~l~~L~~~G~i~ 55 (162)
T 2p5v_A 2 PMPQLTLDKTDIKILQVLQENGRLTN--VELSERVALSPSPCLRRLKQLEDAGIVR 55 (162)
T ss_dssp ---CCCCCHHHHHHHHHHHHCTTCCH--HHHHHHHTSCHHHHHHHHHHHHHTTSEE
T ss_pred CCCccCCCHHHHHHHHHHHHcCCCCH--HHHHHHHCcCHHHHHHHHHHHHHCCCEe
Confidence 35567799999999998876544322 2333 45899999999999999999997
No 5
>2e6x_A TT1592, hypothetical protein TTHA1281; unknown function protein, NPPSFA, national project on protei structural and functional analyses; 2.00A {Thermus thermophilus}
Probab=28.05 E-value=35 Score=23.69 Aligned_cols=17 Identities=29% Similarity=0.516 Sum_probs=14.6
Q ss_pred HHHHHHhCCeEEeEEcc
Q 038665 93 KQLEEATGSAVVSQIGQ 109 (171)
Q Consensus 93 e~La~~tgaevVq~IG~ 109 (171)
.++-+++|..+||.||+
T Consensus 3 ~d~L~~LG~~LvWRiGk 19 (69)
T 2e6x_A 3 KDLLDKLGQHLVWRMGR 19 (69)
T ss_dssp HHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHhceeEEeecc
Confidence 45678899999999996
No 6
>2w48_A Sorbitol operon regulator; SORC, activator, repressor, DNA-binding, transcription, transcription regulator, transcription regulation; 3.20A {Klebsiella pneumoniae}
Probab=28.02 E-value=2.1e+02 Score=23.26 Aligned_cols=50 Identities=12% Similarity=0.134 Sum_probs=35.6
Q ss_pred CCCCCCHHHHHHHHHHHHhCCeEeEEEcCCChhhHHHHHHHHHHHhCCeEE
Q 038665 54 GKSGVTDGVVTSFIETLEANELLKIKIHRTCPGELEDVVKQLEEATGSAVV 104 (171)
Q Consensus 54 GK~GLTe~VI~eI~~aL~~hELIKVKil~n~~~d~~e~ae~La~~tgaevV 104 (171)
-+-|+|+..|.-.=..|+..++|+|++...... ..++...+++..+-.-+
T Consensus 29 ~~l~vS~~tIrRdL~~l~~~G~v~iri~g~~~~-~~~le~~l~~~~~~~~~ 78 (315)
T 2w48_A 29 RELGIYRTTISRLLKRGREQGIVTIAINYDYNE-NLWLEQQLKQKFGLKEA 78 (315)
T ss_dssp HHTTCCHHHHHHHHHHHHHTTSEEEEECSSCCH-HHHHHHHHHHHHTCSEE
T ss_pred HHHCcCHHHHHHHHHHHHHCCcEEEEecCCccc-HHHHHHHHHHHhCCCEE
Confidence 346899999999999999999999999887532 12233345555555443
No 7
>3k2t_A LMO2511 protein; listeria monocytogenes,binding, structural genomics, PSI-2, protein structure initiative; 2.40A {Listeria monocytogenes}
Probab=27.33 E-value=82 Score=20.64 Aligned_cols=44 Identities=23% Similarity=0.169 Sum_probs=26.3
Q ss_pred eEeEEEcCCChhhHHHHHHHHHHHhCCeEEeEE---ccEEEEEcCCC
Q 038665 75 LLKIKIHRTCPGELEDVVKQLEEATGSAVVSQI---GQTVIIYRPSL 118 (171)
Q Consensus 75 LIKVKil~n~~~d~~e~ae~La~~tgaevVq~I---G~t~ILYR~s~ 118 (171)
+|+.|-..-.+.+.++++.+++-.-.--+|-.= |.+-|+||...
T Consensus 2 ivr~K~~~~kpmsveEAv~qmel~gh~F~vF~n~~t~~~nVvYrR~d 48 (57)
T 3k2t_A 2 IVRTKQFSLKPMDSEEAVLQMNLLGHSFYVYTDAETNGTNIVYSRKD 48 (57)
T ss_dssp CCCCCC---CCBCHHHHHHHHHHHTCSEEEEEBSSSCCEEEEEECTT
T ss_pred eEEEEeccCCCCCHHHHHHHHHhCCCcEEEEEcCCCCCEEEEEEeCC
Confidence 455555555678889999999875333333322 67777787654
No 8
>2cmp_A G1P, terminase small subunit; DNA packaging, DNA binding DO; 1.58A {Bacteriophage SF6}
Probab=26.03 E-value=28 Score=23.33 Aligned_cols=46 Identities=15% Similarity=0.216 Sum_probs=24.4
Q ss_pred CCCCCCCCCHHHHHHHHHhhhh-cCCcccceecCCCCCCHHHHHHHHHHH
Q 038665 22 SPLPLPKLTVKEKKELASYAHS-LGKKLKCQLVGKSGVTDGVVTSFIETL 70 (171)
Q Consensus 22 ~~~~~~~LT~kqRk~LR~~AH~-LkP~i~~V~IGK~GLTe~VI~eI~~aL 70 (171)
+.+.++.||++|++|--.+.-. ++.. ---=+.|-++......-..|
T Consensus 2 ~~~~~~~LT~kQ~~F~~~Yi~~~~Nat---~Aa~kAGYs~~tA~~~as~L 48 (63)
T 2cmp_A 2 SHMKEPKLSPKQERFIEEYFINDMNAT---KAAIAAGYSKNSASAIGAEN 48 (63)
T ss_dssp ------CCCHHHHHHHHHHHHTTTCHH---HHHHHTTCCTTTHHHHHHHH
T ss_pred CCCccccCCHHHHHHHHHHHhcCCCHH---HHHHHhcCCHhHHHHHHHHH
Confidence 3566788999999998887777 6653 11123455555444443333
No 9
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=25.84 E-value=1.3e+02 Score=26.92 Aligned_cols=66 Identities=12% Similarity=0.216 Sum_probs=43.7
Q ss_pred HHHHHHHHHhhhhcCCccc---------ceecCCCCCCHHHHHHHHHHHHhCCeEeEEEcCCChhhHHHHHHHHHHHhCC
Q 038665 31 VKEKKELASYAHSLGKKLK---------CQLVGKSGVTDGVVTSFIETLEANELLKIKIHRTCPGELEDVVKQLEEATGS 101 (171)
Q Consensus 31 ~kqRk~LR~~AH~LkP~i~---------~V~IGK~GLTe~VI~eI~~aL~~hELIKVKil~n~~~d~~e~ae~La~~tga 101 (171)
..|+.+++.+...+-|... .|.|=..|+.|..+. .|..++++-|+... +...+.|+..|||
T Consensus 253 ~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~----~L~~~gI~~v~~v~------~~~leria~~tGa 322 (517)
T 3iyg_Z 253 KAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLD----ALAKEGIIALRRAK------RRNMERLTLACGG 322 (517)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHH----HHHHCCCEEEEecC------HHHHHHHHHHhCC
Confidence 4577778777666533210 134556788776655 55668999888643 3346779999999
Q ss_pred eEEeE
Q 038665 102 AVVSQ 106 (171)
Q Consensus 102 evVq~ 106 (171)
.+|..
T Consensus 323 ~iv~~ 327 (517)
T 3iyg_Z 323 IALNS 327 (517)
T ss_pred EEecc
Confidence 99863
No 10
>1nbw_B Glycerol dehydratase reactivase beta subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.51.3.2
Probab=25.72 E-value=2.1e+02 Score=21.27 Aligned_cols=72 Identities=10% Similarity=0.059 Sum_probs=51.2
Q ss_pred CCcccceecCCCCCCHHHHHHHHHHHHhCCeEeEEEcCCCh-hhHHHHHHHHHHHhCCeE-EeEE--ccEEEEEcCCC
Q 038665 45 GKKLKCQLVGKSGVTDGVVTSFIETLEANELLKIKIHRTCP-GELEDVVKQLEEATGSAV-VSQI--GQTVIIYRPSL 118 (171)
Q Consensus 45 kP~i~~V~IGK~GLTe~VI~eI~~aL~~hELIKVKil~n~~-~d~~e~ae~La~~tgaev-Vq~I--G~t~ILYR~s~ 118 (171)
+|.| ++.+=.++..+.++.+|-.-++..++ ...+..... .|..++|.+-|..++.-+ |.+- |.++|=||.=+
T Consensus 5 ~PaI-~i~~~~~~~~~~~l~~vl~GIEEEGi-p~~v~~~~~~~d~~~lA~~AA~~S~lgVGIGi~~~G~~vih~~~L~ 80 (117)
T 1nbw_B 5 PPGV-RLFYDPRGHHAGAINELCWGLEEQGV-PCQTITYDGGGDAAALGALAARSSPLRVGIGLSASGEIALTHAQLP 80 (117)
T ss_dssp CCCE-EEEECTTSCCHHHHHHHHHHHHHTTC-CEEEEECTTCCCHHHHHHHHHHHCTTSEEEEECTTSEEEEEETTSC
T ss_pred CCEE-EEEeCCCCCCHHHHHHHHhhhhhcCC-CeEEEEeCCCCCHHHHHHHHHHhCCCceEEEECCCCCEEEEcCCCC
Confidence 5654 23343477788999999999999885 455544443 799999999999998877 4443 55677776543
No 11
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=22.78 E-value=66 Score=23.41 Aligned_cols=23 Identities=13% Similarity=0.403 Sum_probs=20.9
Q ss_pred CCCHHHHHHHHHHHHhCCeEeEE
Q 038665 57 GVTDGVVTSFIETLEANELLKIK 79 (171)
Q Consensus 57 GLTe~VI~eI~~aL~~hELIKVK 79 (171)
|+|...+..+-..|++.++|++.
T Consensus 174 g~sr~tvsR~l~~l~~~g~I~~~ 196 (216)
T 4ev0_A 174 GTSRETVSRVLHALAEEGVVRLG 196 (216)
T ss_dssp TSCHHHHHHHHHHHHHTTSEEEE
T ss_pred CCCHHHHHHHHHHHHHCCCEEec
Confidence 89999999999999999999764
No 12
>3lyv_A Ribosome-associated factor Y; ribosomal protein S30AE family, structural genomics, PSI-2, structure initiative; 2.70A {Streptococcus pyogenes}
Probab=21.81 E-value=97 Score=20.97 Aligned_cols=44 Identities=25% Similarity=0.312 Sum_probs=28.7
Q ss_pred CeEeEEEcCCChhhHHHHHHHHHHHhCCeEEeEE----ccEEEEEcCCC
Q 038665 74 ELLKIKIHRTCPGELEDVVKQLEEATGSAVVSQI----GQTVIIYRPSL 118 (171)
Q Consensus 74 ELIKVKil~n~~~d~~e~ae~La~~tgaevVq~I----G~t~ILYR~s~ 118 (171)
++|+.|-..-.+.+.++++.+++-. |..+.=.. |.+-|+||...
T Consensus 2 ~iVr~K~~~~kpMsveEAv~qMel~-gh~F~vF~n~etg~~nVVYRR~d 49 (66)
T 3lyv_A 2 QVVRTKNVTLKPMDVEEARLQMELL-GHDFFIYTDSEDGATNILYRRED 49 (66)
T ss_dssp CCCCCCCCCCCEECHHHHHHHHHTT-TCSEEEEEETTTCSEEEEEECTT
T ss_pred eEEEEEEccCCCCCHHHHHHHHHcC-CCcEEEEEeCCCCCEEEEEEECC
Confidence 3556666666688899999998764 44433322 67777777654
No 13
>2noc_A Putative periplasmic protein; GFT STR106, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella choleraesuis} SCOP: d.230.6.1
Probab=21.05 E-value=1.6e+02 Score=21.12 Aligned_cols=37 Identities=22% Similarity=0.325 Sum_probs=30.0
Q ss_pred CChhhHHHHHHHHHHHhCCeEEeEEc-----c---EEEEEcCCCC
Q 038665 83 TCPGELEDVVKQLEEATGSAVVSQIG-----Q---TVIIYRPSLT 119 (171)
Q Consensus 83 n~~~d~~e~ae~La~~tgaevVq~IG-----~---t~ILYR~s~~ 119 (171)
+.+.|..+...+.|++-||.-..+|+ + ++.|||+.-+
T Consensus 49 ~s~~da~~~La~kAd~~GA~~Y~Iis~~~~~~~~~tA~iYk~~~~ 93 (99)
T 2noc_A 49 MSPLDAREDLIKKADEKGADVVVLTSGQTENKIHGTADIYKKKLE 93 (99)
T ss_dssp CCHHHHHHHHHHHHHHTCCSEEECCSCCSSSSCCCEEEEEEECSC
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEEEEcCCCcEEEEEEeecCchh
Confidence 77888888888889999998877772 2 8999997654
No 14
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=20.82 E-value=2.5e+02 Score=21.06 Aligned_cols=66 Identities=15% Similarity=0.339 Sum_probs=47.0
Q ss_pred CCHHHHHHHHHhhhhc---CCcccceecCCCCCCHHHHHHHHHHHHhCCeEeEEEcCCChhhHHHHHHHHHHHhCCeEEe
Q 038665 29 LTVKEKKELASYAHSL---GKKLKCQLVGKSGVTDGVVTSFIETLEANELLKIKIHRTCPGELEDVVKQLEEATGSAVVS 105 (171)
Q Consensus 29 LT~kqRk~LR~~AH~L---kP~i~~V~IGK~GLTe~VI~eI~~aL~~hELIKVKil~n~~~d~~e~ae~La~~tgaevVq 105 (171)
+...|+.+|+.+...+ +|- |-|=..|+.|-.. +.|.+++++=|+... . ...+.|+..|||.+|.
T Consensus 53 ~~~~E~~~l~~~v~kI~~~g~n---VVl~~k~I~d~a~----~~l~k~gI~~v~~v~--~----~dleria~atGa~iv~ 119 (159)
T 1ass_A 53 FLNQETNTFKQMVEKIKKSGAN---VVLCQKGIDDVAQ----HYLAKEGIYAVRRVK--K----SDMEKLAKATGAKIVT 119 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCS---EEEESSCBCHHHH----HHHHHTTCEEECSCC--H----HHHHHHHHHHTCCCBS
T ss_pred HHHHHHHHHHHHhhhhhhCCCe---EEEECCccCHHHH----HHHHHCCCEEEccCC--H----HHHHHHHHHhCCeeeC
Confidence 4567888888777665 665 4567788977654 467788888776544 3 3445699999999987
Q ss_pred EE
Q 038665 106 QI 107 (171)
Q Consensus 106 ~I 107 (171)
.+
T Consensus 120 ~~ 121 (159)
T 1ass_A 120 DL 121 (159)
T ss_dssp ST
T ss_pred cc
Confidence 64
No 15
>1tbx_A ORF F-93, hypothetical 11.0 kDa protein; sulfolobus spindle virus, winged helix, fusellovirus; 2.70A {Sulfolobus virus 1} SCOP: a.4.5.48
Probab=20.49 E-value=1.7e+02 Score=19.13 Aligned_cols=53 Identities=9% Similarity=-0.065 Sum_probs=40.6
Q ss_pred CCCCCHHHHHHHHHhhhhcCCcccceec-----CCCCCCHHHHHHHHHHHHhCCeEeEEE
Q 038665 26 LPKLTVKEKKELASYAHSLGKKLKCQLV-----GKSGVTDGVVTSFIETLEANELLKIKI 80 (171)
Q Consensus 26 ~~~LT~kqRk~LR~~AH~LkP~i~~V~I-----GK~GLTe~VI~eI~~aL~~hELIKVKi 80 (171)
...||..|-..|..++.+ .+.- .-.| -.-|++.+.+..+-+.|++.+||.-..
T Consensus 3 ~~~lt~~q~~iL~~l~~~-~~~~-~~el~~~la~~l~is~~tvs~~l~~Le~~gli~r~~ 60 (99)
T 1tbx_A 3 STPFFYPEAIVLAYLYDN-EGIA-TYDLYKKVNAEFPMSTATFYDAKKFLIQEGFVKERQ 60 (99)
T ss_dssp CCSSBCHHHHHHHHHTTC-TTCB-HHHHHHHHHTTSCCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred CCCCCHHHHHHHHHHHHc-CCcC-HHHHHHHHHHHcCCCHHHHHHHHHHHHHCCCEEEEe
Confidence 456899999999999875 3321 1123 556999999999999999999997543
Done!