Query 038667
Match_columns 411
No_of_seqs 205 out of 1665
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 23:26:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038667.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038667hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 1.7E-60 5.8E-65 472.1 26.8 332 55-404 16-399 (413)
2 3aup_A SBG7S, BG, basic 7S glo 100.0 4.2E-57 1.4E-61 447.8 28.5 331 55-410 17-399 (403)
3 3psg_A Pepsinogen; hydrolase(a 100.0 2.4E-56 8.1E-61 436.9 26.5 302 50-404 47-370 (370)
4 1tzs_A Cathepsin E; hydrolase, 100.0 8.3E-56 2.8E-60 430.8 29.9 307 52-409 16-347 (351)
5 2apr_A Rhizopuspepsin; hydrola 100.0 1.1E-55 3.8E-60 425.5 29.6 293 56-404 12-324 (325)
6 3c9x_A Trichoderma reesei aspa 100.0 2.8E-56 9.6E-61 430.4 24.9 294 56-403 12-329 (329)
7 1j71_A Candidapepsin, aspartic 100.0 4.3E-56 1.5E-60 430.1 24.7 288 57-407 10-327 (334)
8 1oew_A Endothiapepsin; hydrola 100.0 4.8E-56 1.6E-60 428.7 24.7 293 56-403 12-329 (329)
9 2x0b_A Renin; hydrolase-hormon 100.0 4.1E-56 1.4E-60 436.2 23.8 301 52-404 54-383 (383)
10 1dpj_A Proteinase A; proteinas 100.0 2.9E-55 9.8E-60 423.5 28.8 297 55-404 9-329 (329)
11 1mpp_A Pepsin; hydrolase(acid 100.0 2E-55 6.9E-60 429.9 26.6 303 52-410 11-361 (361)
12 2qzx_A Candidapepsin-5; aspart 100.0 1.4E-55 4.9E-60 427.8 25.3 290 57-408 10-335 (342)
13 3cms_A Chymosin B; hydrolase, 100.0 1.1E-55 3.7E-60 425.3 22.5 292 53-404 8-323 (323)
14 4aa9_A Chymosin; hydrolase, as 100.0 2.2E-55 7.7E-60 422.7 24.4 294 52-404 4-320 (320)
15 1am5_A Pepsin, acid proteinase 100.0 4.3E-55 1.5E-59 421.4 25.2 293 55-404 8-324 (324)
16 3fv3_A SAPP1P-secreted asparti 100.0 1.9E-54 6.4E-59 419.6 28.0 291 57-408 10-333 (339)
17 1htr_B Gastricsin; aspartyl pr 100.0 9.2E-55 3.2E-59 419.9 25.0 297 56-404 9-329 (329)
18 3pvk_A Candidapepsin-2; hydrol 100.0 9.4E-55 3.2E-59 422.2 25.2 290 56-407 9-334 (342)
19 3k1w_A Renin; protease, altern 100.0 2E-54 6.9E-59 419.7 24.0 299 55-404 14-340 (341)
20 1miq_A Plasmepsin; aspartic pr 100.0 4.1E-54 1.4E-58 421.8 25.6 293 51-404 54-374 (375)
21 1ibq_A Aspergillopepsin; aspar 100.0 3.9E-54 1.3E-58 414.7 24.3 291 56-404 11-325 (325)
22 1izd_A Aspartic proteinase; su 100.0 2.6E-54 8.8E-59 415.5 22.0 289 56-404 12-323 (323)
23 1qdm_A Prophytepsin; aspartic 100.0 2.7E-53 9.2E-58 427.1 27.8 310 51-404 44-478 (478)
24 2ewy_A Beta-secretase 2; BACE2 100.0 5.4E-53 1.8E-57 416.0 28.3 313 56-410 10-361 (383)
25 1bxo_A Protein (penicillopepsi 100.0 4.9E-54 1.7E-58 413.7 19.7 289 56-404 12-323 (323)
26 2qp8_A Beta-secretase 1; BACE1 100.0 7.6E-53 2.6E-57 416.4 27.9 316 56-410 18-373 (395)
27 1yg9_A Aspartic protease BLA G 100.0 2.8E-53 9.7E-58 409.4 22.7 295 53-404 11-329 (330)
28 3qvc_A Histo-aspartic protease 100.0 2.9E-53 1E-57 423.2 23.5 294 51-404 129-449 (451)
29 2bju_A Plasmepsin II; aspartic 100.0 1.6E-53 5.5E-58 424.6 21.6 288 55-404 134-450 (453)
30 3lpj_A Beta-secretase 1; alzhe 100.0 1.3E-52 4.5E-57 421.7 28.2 314 56-410 71-426 (455)
31 1t6e_X Xylanase inhibitor; two 100.0 1.6E-52 5.5E-57 412.0 27.8 320 55-405 10-374 (381)
32 3vf3_A Beta-secretase 1; struc 100.0 2.6E-52 8.9E-57 413.6 28.0 315 57-410 26-380 (402)
33 1wkr_A Polyporopepsin; hydrola 100.0 3.5E-51 1.2E-55 396.7 25.7 289 58-408 11-337 (340)
34 1b5f_A Protein (cardosin A); h 100.0 8.8E-41 3E-45 307.5 18.2 210 55-301 9-237 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 1.2E-34 4E-39 267.1 20.3 216 167-404 3-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 1.6E-23 5.3E-28 163.9 7.3 84 55-161 9-96 (97)
37 1b5f_B Protein (cardosin A); h 99.7 1.1E-16 3.8E-21 122.6 7.0 80 317-404 5-87 (87)
38 3s8i_A Protein DDI1 homolog 1; 93.7 0.084 2.9E-06 43.5 5.3 28 377-404 109-136 (148)
39 2i1a_A DNA damage-inducible pr 92.8 0.16 5.5E-06 41.6 5.6 31 57-89 23-53 (148)
40 2i1a_A DNA damage-inducible pr 91.7 0.29 1E-05 40.0 5.9 26 377-402 110-135 (148)
41 3s8i_A Protein DDI1 homolog 1; 88.8 0.73 2.5E-05 37.8 5.9 32 57-90 21-52 (148)
42 2hs1_A HIV-1 protease; ultra-h 85.2 1.1 3.7E-05 34.0 4.5 27 62-90 10-36 (99)
43 1fmb_A EIAV protease; hydrolas 85.1 0.9 3.1E-05 34.8 4.1 26 61-88 9-34 (104)
44 3liy_A Protease; hydrolase, hy 83.1 1.2 4.1E-05 34.5 3.9 31 62-92 12-45 (116)
45 3ec0_A Protease; HIV-2, inhibi 82.0 1.8 6.3E-05 32.7 4.6 27 62-90 10-36 (99)
46 2hah_A Protease, retropepsin; 76.9 2.3 7.9E-05 33.2 3.8 24 65-90 18-41 (116)
47 3sqf_A Protease; folded monome 70.4 4.7 0.00016 31.2 4.1 28 62-91 11-38 (114)
48 3slz_A GAG-Pro-POL polyprotein 59.7 8.7 0.0003 30.6 3.9 30 59-90 21-50 (132)
49 2rsp_A RSV protease; hydrolase 54.7 13 0.00044 29.2 4.1 21 71-91 29-49 (124)
50 3ka2_A [L-Ala51;Gly51']HIV-1 p 54.0 11 0.00039 32.3 3.9 26 61-88 9-34 (203)
51 3ka2_A [L-Ala51;Gly51']HIV-1 p 33.3 37 0.0013 29.0 3.9 27 61-89 113-139 (203)
52 1b5f_A Protein (cardosin A); h 30.2 50 0.0017 28.7 4.4 32 58-89 187-226 (239)
53 1lya_B Cathepsin D; lysosomal 26.7 58 0.002 28.1 4.2 33 58-90 98-137 (241)
54 2hah_A Protease, retropepsin; 23.1 54 0.0019 25.3 2.8 31 245-290 10-40 (116)
55 3c9x_A Trichoderma reesei aspa 21.0 65 0.0022 29.4 3.5 33 58-90 192-230 (329)
56 1wkr_A Polyporopepsin; hydrola 20.2 83 0.0028 28.8 4.1 16 275-290 27-42 (340)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=1.7e-60 Score=472.07 Aligned_cols=332 Identities=20% Similarity=0.317 Sum_probs=265.8
Q ss_pred cCCCceEEEEEEeCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCCcCCCCCCCCCCC---
Q 038667 55 DISNSLFYVNISIGQPPVPQFTAMDTGSSLLWVHCYPCRDCSPQLGTIFYPSRSSSYAYVPCDSEHCRYFPYARCSA--- 131 (411)
Q Consensus 55 ~~~~~~Y~~~i~iGtP~q~~~~i~DTGSs~~wv~~~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~C~~--- 131 (411)
+..+++|+++|.||||||++.|+|||||+++||+|.+| .+|+||+.++|.++.|.......|..
T Consensus 16 d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c-------------~~Sst~~~v~C~s~~C~~~~~~~~~~c~s 82 (413)
T 3vla_A 16 DASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN-------------YVSSTYRPVRCRTSQCSLSGSIACGDCFN 82 (413)
T ss_dssp CTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS-------------CCCTTCEECBTTSHHHHHTTCCEEECCSS
T ss_pred cCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC-------------CCCCCcCccCCCcccccccccCCCccccc
Confidence 35789999999999999999999999999999999865 48999999999999998765333311
Q ss_pred ------CCCcceeeEee-CCCCeeeeeEEEEEEEeeCCCCC----ceeeecEEEEeEeeec---cCCCcceEEecCCCCC
Q 038667 132 ------YKHRCIYTQLY-LIGPETSVFVSTEQLTFKNTDES----TIHVQDVVFGCGFSTN---RNFKFSGIFGLGIGRS 197 (411)
Q Consensus 132 ------~~~~~~~~~~Y-~~gs~~~G~~~~D~v~~~~~~~~----~~~~~~~~fg~~~~~~---~~~~~~GilGLg~~~~ 197 (411)
.++.|.|.+.| ++++.+.|.+++|+|+|+..++. .++++++.|||++... +...++||||||++.+
T Consensus 83 ~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~~~~dGIlGLg~~~l 162 (413)
T 3vla_A 83 GPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLASGVVGMAGLGRTRI 162 (413)
T ss_dssp CCBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSCTTCCEEEECSSSSS
T ss_pred CCCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCcccccccccccCCCCc
Confidence 12579999999 48877899999999999854332 4788999999999863 3346899999999999
Q ss_pred chHHhh------cCceEEecCCCCCCCCCCcceecCCCCCC--------CC-CcccccccC-------------CCceEE
Q 038667 198 SLVSQL------NSSFSYCIGSLHDPDYLHNKLILGDGAII--------DE-GDATPLQFI-------------DGHYYI 249 (411)
Q Consensus 198 S~~~ql------~~~FS~~l~~~~~~~~~~g~l~fGg~~~~--------~~-~~~~pl~~~-------------~~~y~v 249 (411)
|+++|| .++|||||.+.. ...|.|+||+.+.. .. ..|+||... ..+|+|
T Consensus 163 Sl~sql~~~~~i~~~FS~cL~~~~---~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~~y~V 239 (413)
T 3vla_A 163 ALPSQFASAFSFKRKFAMCLSGST---SSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFI 239 (413)
T ss_dssp SHHHHHHHHHTCCSEEEEECCSCS---SSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCCSCEE
T ss_pred chHHHHhhhcCCCceEEEeCCCCC---CCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCceEEE
Confidence 999998 389999999842 23599999997631 13 569999532 279999
Q ss_pred EeeEEEECCeEEecCCCcccccC-CCCcEEEecccccccccHHHHHHHHHHHHHHhhcCCCcCCCC--CCCCccccccCC
Q 038667 250 TLEAISVDGRMLDINPNIFKRDD-SGGGVMIDSGTDVTWLVKEAYEALRDEVMIRLEGEQMRSYSW--PDKLCYHGIMSS 326 (411)
Q Consensus 250 ~l~~i~v~g~~~~~~~~~~~~~~-~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~g~~~~~~~~--~~~~C~~~~~~~ 326 (411)
+|++|+||++.+.+++..|..+. +++++||||||++++||+++|++|+++|.+++....+++... ..+.|+......
T Consensus 240 ~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~~~C~~~~~~~ 319 (413)
T 3vla_A 240 GVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPFGACFSTDNIL 319 (413)
T ss_dssp CCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTTCSCEEECTTCC
T ss_pred EEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCCCcceeccCCcc
Confidence 99999999999998877774332 357899999999999999999999999998874211232221 227999654211
Q ss_pred ---CccCCCeEEEEEcC-CcEEEEcCCceEEEcCCCeEEEEEEeCCCCCCcccceeeehhhcceeEEEEECCCCEEEEec
Q 038667 327 ---DLKGFPTVRFHFRG-GAKLALEKDSMFYQPRPDAFCMAVNPASINNRYVNFSLIGMMAQQFYNVGYDIGRKQKTFQR 402 (411)
Q Consensus 327 ---~~~~~P~i~~~f~~-g~~~~l~~~~y~~~~~~~~~C~~~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~~riGfa~ 402 (411)
....+|+|+|+|++ +++|+|++++|+++..++.+|+++....... ++.||||+.|||++|+|||++++|||||+
T Consensus 320 ~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~--~~~~IlGd~fl~~~~vvfD~~~~riGfa~ 397 (413)
T 3vla_A 320 STRLGPSVPSIDLVLQSESVVWTITGSNSMVYINDNVVCLGVVDGGSNL--RTSIVIGGHQLEDNLVQFDLATSRVGFSG 397 (413)
T ss_dssp EETTEECCCCEEEECSSTTCEEEECHHHHEEEEETTEEEECEEEEESSC--SSSEEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred ccccccCCCcEEEEEcCCcEEEEeCccceEEEeCCCcEEEEEEecCCCc--ccceeEehhhhcCeEEEEECCCCEEEEEE
Confidence 12379999999995 4899999999999876778999887754321 23599999999999999999999999998
Q ss_pred CC
Q 038667 403 MD 404 (411)
Q Consensus 403 ~~ 404 (411)
+.
T Consensus 398 ~~ 399 (413)
T 3vla_A 398 TL 399 (413)
T ss_dssp EG
T ss_pred ec
Confidence 53
No 2
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=4.2e-57 Score=447.81 Aligned_cols=331 Identities=21% Similarity=0.337 Sum_probs=255.0
Q ss_pred cCCCceEEEEEEeCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCCcCCCCCCC-------
Q 038667 55 DISNSLFYVNISIGQPPVPQFTAMDTGSSLLWVHCYPCRDCSPQLGTIFYPSRSSSYAYVPCDSEHCRYFPYA------- 127 (411)
Q Consensus 55 ~~~~~~Y~~~i~iGtP~q~~~~i~DTGSs~~wv~~~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~------- 127 (411)
+..++.|+++|.||||||++.|+|||||+++||+|.+| .+|+||+.++|.++.|......
T Consensus 17 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~-------------~~Sst~~~~~C~s~~C~~~~~~~c~~c~~ 83 (403)
T 3aup_A 17 DGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQ-------------YSSKTYQAPFCHSTQCSRANTHQCLSCPA 83 (403)
T ss_dssp CTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSC-------------CCCSSCBCCCTTBHHHHHTTCCCEEECSS
T ss_pred CCCCceEEEEEECCCCCceeEEEEECCCCceeECCCCC-------------CCCCCCCccCCCCccccCccccCccccCC
Confidence 45789999999999999999999999999999998864 5899999999999999765432
Q ss_pred ----CCCCCCCcceeeEeeC-CCCeeeeeEEEEEEEeeCCCCCc------eeeecEEEEeEeeec----cCCCcceEEec
Q 038667 128 ----RCSAYKHRCIYTQLYL-IGPETSVFVSTEQLTFKNTDEST------IHVQDVVFGCGFSTN----RNFKFSGIFGL 192 (411)
Q Consensus 128 ----~C~~~~~~~~~~~~Y~-~gs~~~G~~~~D~v~~~~~~~~~------~~~~~~~fg~~~~~~----~~~~~~GilGL 192 (411)
.|.. ..|.|.+.|+ +++.+.|.+++|+|+|++.++.. ++++++.|||++... ....++|||||
T Consensus 84 ~~~s~~~~--~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~dGIlGL 161 (403)
T 3aup_A 84 ASRPGCHK--NTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGL 161 (403)
T ss_dssp SCBTTBCS--SEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTCCEEEEC
T ss_pred CCCCCCCC--CcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCCceEEEC
Confidence 2322 6799999998 78888999999999998754433 789999999999863 22468999999
Q ss_pred CCCCCchHHhh------cCceEEecCCCCCCCCCCcceecCCCCCCC----------CCcccccccC-CCceEEEeeEEE
Q 038667 193 GIGRSSLVSQL------NSSFSYCIGSLHDPDYLHNKLILGDGAIID----------EGDATPLQFI-DGHYYITLEAIS 255 (411)
Q Consensus 193 g~~~~S~~~ql------~~~FS~~l~~~~~~~~~~g~l~fGg~~~~~----------~~~~~pl~~~-~~~y~v~l~~i~ 255 (411)
|++.+|+++|| .++||+||.+.. ...|.|+|||+...+ ...|+||... ..+|.|.|++|+
T Consensus 162 g~~~~s~~~ql~~~~~~~~~FS~~L~~~~---~~~G~l~fGgd~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~v~l~~i~ 238 (403)
T 3aup_A 162 GHAPISLPNQLASHFGLQRQFTTCLSRYP---TSKGAIIFGDAPNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNSIR 238 (403)
T ss_dssp SSSTTSHHHHHHHHHTCCSEEEEECCSCT---TSCEEEEESCHHHHC--CTTCCTTTTEEEEECEECTTSCEEECEEEEE
T ss_pred CCCCcCHHHHHHhhcCCCCeEEEEcCCCC---CCCeeEEECCCchhccccccccccCceeecccccCCCCcceEEEEEEE
Confidence 99999999987 489999998742 235999999933222 3359999533 479999999999
Q ss_pred ECCeEE-ecCCCcccc-cCCCCcEEEecccccccccHHHHHHHHHHHHHHhhcCCCcCCC--CCCCCccccccCCCccCC
Q 038667 256 VDGRML-DINPNIFKR-DDSGGGVMIDSGTDVTWLVKEAYEALRDEVMIRLEGEQMRSYS--WPDKLCYHGIMSSDLKGF 331 (411)
Q Consensus 256 v~g~~~-~~~~~~~~~-~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~g~~~~~~~--~~~~~C~~~~~~~~~~~~ 331 (411)
|+++.+ .+++..+.. ..+..++||||||++++||+++|++|+++|.+++.+ .+... .....|+.... ...+
T Consensus 239 v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~--~~~~~~~~~~~~c~~c~~---~~~~ 313 (403)
T 3aup_A 239 INQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPK--QAQVKSVAPFGLCFNSNK---INAY 313 (403)
T ss_dssp ETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCG--GGEECCCTTCSCEECGGG---CCCC
T ss_pred ECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhcc--ccccCCCCCCCceEECCC---cCcC
Confidence 999988 666554421 223467999999999999999999999999876632 12211 11134553221 1279
Q ss_pred CeEEEEEcCC--cEEEEcCCceEEEcCCCeEEEEEEeCCCCCCcccceeeehhhcceeEEEEECCCCEEEE-------ec
Q 038667 332 PTVRFHFRGG--AKLALEKDSMFYQPRPDAFCMAVNPASINNRYVNFSLIGMMAQQFYNVGYDIGRKQKTF-------QR 402 (411)
Q Consensus 332 P~i~~~f~~g--~~~~l~~~~y~~~~~~~~~C~~~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~~riGf-------a~ 402 (411)
|+|+|+|+++ ++|+|++++|+++..++.+|+++....... .+.||||+.|||++|+|||++++|||| ++
T Consensus 314 P~i~f~f~g~~~~~~~l~~~~y~~~~~~~~~C~~~~~~~~~~--~~~~ILG~~fl~~~yvvfD~~~~rIGf~A~~~~~~~ 391 (403)
T 3aup_A 314 PSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQP--RAEITLGARQLEENLVVFDLARSRVGFSTSSLHSHG 391 (403)
T ss_dssp CCEEEEESSTTCCEEEECHHHHEEEC---CEEECEEECCSCC--SSSEEECHHHHTTSCEEEETTTTEEEEESSCGGGGT
T ss_pred CcEEEEEcCCCceEEEEcccceEEEcCCCeEEEEEEcCCCCC--CCcEEEChHHhcCeEEEEECCCCEEEEecccccccC
Confidence 9999999955 699999999999876677999887754321 235999999999999999999999999 88
Q ss_pred CCCCCccC
Q 038667 403 MDCEVLDD 410 (411)
Q Consensus 403 ~~c~~~~~ 410 (411)
++|+++..
T Consensus 392 ~~C~~~~~ 399 (403)
T 3aup_A 392 VKCADLFN 399 (403)
T ss_dssp CCGGGSCC
T ss_pred CCcccccc
Confidence 99988653
No 3
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=2.4e-56 Score=436.92 Aligned_cols=302 Identities=20% Similarity=0.301 Sum_probs=244.2
Q ss_pred ccccccCCCceEEEEEEeCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCCcCCCCCCCCC
Q 038667 50 ILPSNDISNSLFYVNISIGQPPVPQFTAMDTGSSLLWVHCYPCRDCSPQLGTIFYPSRSSSYAYVPCDSEHCRYFPYARC 129 (411)
Q Consensus 50 ~~~~~~~~~~~Y~~~i~iGtP~q~~~~i~DTGSs~~wv~~~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~C 129 (411)
..|+.++.+..|+++|.||||||++.|+|||||+++||+|..|..|.-..++.|||++|+||+.
T Consensus 47 ~~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~C~~~~~y~~~~SsT~~~---------------- 110 (370)
T 3psg_A 47 DEPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDHNQFNPDDSSTFEA---------------- 110 (370)
T ss_dssp CCTTGGGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCEE----------------
T ss_pred eecceeccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCcccCCCCCCCCccCcCcEE----------------
Confidence 3455567899999999999999999999999999999999999873326789999999999999
Q ss_pred CCCCCcceeeEeeCCCCeeeeeEEEEEEEeeCCCCCceeeecEEEEeEeeec---c-CCCcceEEecCCCCCc------h
Q 038667 130 SAYKHRCIYTQLYLIGPETSVFVSTEQLTFKNTDESTIHVQDVVFGCGFSTN---R-NFKFSGIFGLGIGRSS------L 199 (411)
Q Consensus 130 ~~~~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~---~-~~~~~GilGLg~~~~S------~ 199 (411)
..|.|.+.|++|+ +.|.+++|+|+|++ ++++++.|||++... + ...++||||||++..+ +
T Consensus 111 ----~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~-----~~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~ 180 (370)
T 3psg_A 111 ----TSQELSITYGTGS-MTGILGYDTVQVGG-----ISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGATPV 180 (370)
T ss_dssp ----EEEEEEEESSSCE-EEEEEEEEEEEETT-----EEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCCCH
T ss_pred ----CCcEEEEEeCCce-EEEEEEEEEEeeCC-----cccCCeEEEEEEeecccccccCCccceeccCCccccccCCCCH
Confidence 6889999999998 79999999999998 899999999998764 2 3468999999998764 3
Q ss_pred HHhh-------cCceEEecCCCCCCCCCCcceecCCCCCC-CCC--cccccccCCCceEEEeeEEEECCeEEecCCCccc
Q 038667 200 VSQL-------NSSFSYCIGSLHDPDYLHNKLILGDGAII-DEG--DATPLQFIDGHYYITLEAISVDGRMLDINPNIFK 269 (411)
Q Consensus 200 ~~ql-------~~~FS~~l~~~~~~~~~~g~l~fGg~~~~-~~~--~~~pl~~~~~~y~v~l~~i~v~g~~~~~~~~~~~ 269 (411)
+.+| .++||+||.+.. ...|.|+|||.+.. +.+ .|+|+ ....+|.|.+++|+|+++.+...
T Consensus 181 ~~~l~~qg~i~~~~FS~~L~~~~---~~~G~l~fGg~D~~~y~g~l~~~pv-~~~~~w~v~l~~i~v~g~~~~~~----- 251 (370)
T 3psg_A 181 FDNLWDQGLVSQDLFSVYLSSND---DSGSVVLLGGIDSSYYTGSLNWVPV-SVEGYWQITLDSITMDGETIACS----- 251 (370)
T ss_dssp HHHHHHTTCSSSSEEEEEEC--------CEEEEETCCCGGGBSSCCEEEEC-SEETTEEEEECEEESSSSEEECT-----
T ss_pred HHHHHHCCCCCCCEEEEEEccCC---CCCeEEEEEeeChHhcCCcceeecc-cccceeEEEEeEEEECCEEEecC-----
Confidence 4443 689999999852 23489999996633 344 59999 45689999999999999887632
Q ss_pred ccCCCCcEEEecccccccccHHHHHHHHHHHHHHhhcCCCcCCCCCC-CCccccccCCCccCCCeEEEEEcCCcEEEEcC
Q 038667 270 RDDSGGGVMIDSGTDVTWLVKEAYEALRDEVMIRLEGEQMRSYSWPD-KLCYHGIMSSDLKGFPTVRFHFRGGAKLALEK 348 (411)
Q Consensus 270 ~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~g~~~~~~~~~~-~~C~~~~~~~~~~~~P~i~~~f~~g~~~~l~~ 348 (411)
.+..+||||||++++||.+++++|.+++.+.. ...... ++|... ..+|+|+|+|+ |++++|++
T Consensus 252 ---~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~------~~~g~~~v~C~~~------~~lP~i~f~~~-g~~~~l~~ 315 (370)
T 3psg_A 252 ---GGCQAIVDTGTSLLTGPTSAIANIQSDIGASE------NSDGEMVISCSSI------DSLPDIVFTID-GVQYPLSP 315 (370)
T ss_dssp ---TCEEEEECTTCCSEEEEHHHHHHHHHHTTCEE------CTTCCEECCGGGG------GGCCCEEEEET-TEEEEECH
T ss_pred ---CCceEEEcCCCCcEECCHHHHHHHHHHhCCcc------cCCCcEEEECCCc------ccCCcEEEEEC-CEEEEECH
Confidence 25789999999999999999999999994321 111112 899854 37999999998 99999999
Q ss_pred CceEEEcCCCeEEEE-EEeCCCCCCcccceeeehhhcceeEEEEECCCCEEEEecCC
Q 038667 349 DSMFYQPRPDAFCMA-VNPASINNRYVNFSLIGMMAQQFYNVGYDIGRKQKTFQRMD 404 (411)
Q Consensus 349 ~~y~~~~~~~~~C~~-~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~~riGfa~~~ 404 (411)
++|+++ .+..|+. +.........++.||||++|||++|+|||++++|||||+++
T Consensus 316 ~~yi~~--~~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 316 SAYILQ--DDDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp HHHEEE--CSSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred HHhccc--CCCEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 999998 3346986 44432111122359999999999999999999999999974
No 4
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=8.3e-56 Score=430.83 Aligned_cols=307 Identities=21% Similarity=0.293 Sum_probs=243.8
Q ss_pred ccccCCCceEEEEEEeCCCCceEEEEEeCCCCceeEeCCCCC--CCCCCCCCCCCCCCCCcccccCCCCCcCCCCCCCCC
Q 038667 52 PSNDISNSLFYVNISIGQPPVPQFTAMDTGSSLLWVHCYPCR--DCSPQLGTIFYPSRSSSYAYVPCDSEHCRYFPYARC 129 (411)
Q Consensus 52 ~~~~~~~~~Y~~~i~iGtP~q~~~~i~DTGSs~~wv~~~~C~--~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~C 129 (411)
++.+..+..|+++|.||||+|++.|+|||||+++||+|..|. .| ..++.|||++|+||+.
T Consensus 16 ~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C--~~~~~y~~~~SsT~~~---------------- 77 (351)
T 1tzs_A 16 PLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPAC--KTHSRFQPSQSSTYSQ---------------- 77 (351)
T ss_dssp TTGGGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGG--TTSCCBCGGGCTTCBC----------------
T ss_pred eceecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccc--CCCCcCCcccCcceEE----------------
Confidence 443557899999999999999999999999999999999998 48 4679999999999998
Q ss_pred CCCCCcceeeEeeCCCCeeeeeEEEEEEEeeCCCCCceeeecEEEEeEeeec---c-CCCcceEEecCCCCCc------h
Q 038667 130 SAYKHRCIYTQLYLIGPETSVFVSTEQLTFKNTDESTIHVQDVVFGCGFSTN---R-NFKFSGIFGLGIGRSS------L 199 (411)
Q Consensus 130 ~~~~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~---~-~~~~~GilGLg~~~~S------~ 199 (411)
..|.|.+.|++|+ +.|.+++|+|+|++ ++++++.|||++... + ...++||||||++..+ +
T Consensus 78 ----~~~~~~i~Yg~Gs-~~G~~~~D~v~ig~-----~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~ 147 (351)
T 1tzs_A 78 ----PGQSFSIQYGTGS-LSGIIGADQVSVEG-----LTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPV 147 (351)
T ss_dssp ----CSCEEEEESSSCE-EEEEEEEEEEEETT-----EEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGCCCH
T ss_pred ----CCCEEEEEeCCCC-eEEEEEEeEEEECC-----eEECCeEEEEEEeccccccccCCCceEEecCCccccccCCCcH
Confidence 7899999999998 79999999999987 899999999998754 2 3468999999998765 3
Q ss_pred HHhh-------cCceEEecCCCCCCCCCCcceecCCCCCC-CC--CcccccccCCCceEEEeeEEEECCeEEecCCCccc
Q 038667 200 VSQL-------NSSFSYCIGSLHDPDYLHNKLILGDGAII-DE--GDATPLQFIDGHYYITLEAISVDGRMLDINPNIFK 269 (411)
Q Consensus 200 ~~ql-------~~~FS~~l~~~~~~~~~~g~l~fGg~~~~-~~--~~~~pl~~~~~~y~v~l~~i~v~g~~~~~~~~~~~ 269 (411)
+.|| .++||+||.+.... ...|.|+|||.+.. +. ..|+|+. ...+|.|.|++|+|+++.+...
T Consensus 148 ~~~l~~qg~i~~~~FS~~L~~~~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~~----- 220 (351)
T 1tzs_A 148 FDNMMAQNLVDLPMFSVYMSSNPEG-GAGSELIFGGYDHSHFSGSLNWVPVT-KQAYWQIALDNIQVGGTVMFCS----- 220 (351)
T ss_dssp HHHHHHTTCCSSSEEEEECCCCC---CTTCEEEETSCCGGGBCSCCEEEECS-EETTEEEEEEEEEETTEEEECT-----
T ss_pred HHHHHHCCCCCCCEEEEEEcCCCCC-CCCCEEEECCCCHHHcCCceEEEecC-CCceEEEEeCEEEECCceEEcC-----
Confidence 4444 68999999986432 12589999996632 34 4599994 4679999999999999886422
Q ss_pred ccCCCCcEEEecccccccccHHHHHHHHHHHHHHhhcCCCcCCCCCCCCccccccCCCccCCCeEEEEEcCCcEEEEcCC
Q 038667 270 RDDSGGGVMIDSGTDVTWLVKEAYEALRDEVMIRLEGEQMRSYSWPDKLCYHGIMSSDLKGFPTVRFHFRGGAKLALEKD 349 (411)
Q Consensus 270 ~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~g~~~~~~~~~~~~C~~~~~~~~~~~~P~i~~~f~~g~~~~l~~~ 349 (411)
.+..+||||||++++||.+++++|.+++.+.. .. .....+|+.. ..+|+|+|+|+ |++++|+++
T Consensus 221 ---~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~-----~~-g~~~~~C~~~------~~~P~i~f~f~-g~~~~i~~~ 284 (351)
T 1tzs_A 221 ---EGCQAIVDTGTSLITGPSDKIKQLQNAIGAAP-----VD-GEYAVECANL------NVMPDVTFTIN-GVPYTLSPT 284 (351)
T ss_dssp ---TCEEEEECTTCSSEEECHHHHHHHHHHHTCEE-----CS-SSEEECGGGG------GGSCCEEEEET-TEEEEECTT
T ss_pred ---CCceEEeccCCcceeCCHHHHHHHHHHhCCcc-----cC-CeEEEeCCCC------ccCCcEEEEEC-CEEEEECHH
Confidence 25789999999999999999999999984322 11 1112789953 37899999997 899999999
Q ss_pred ceEEEcCC--CeEEEE-EEeCCCCCCcccceeeehhhcceeEEEEECCCCEEEEecCCCCCcc
Q 038667 350 SMFYQPRP--DAFCMA-VNPASINNRYVNFSLIGMMAQQFYNVGYDIGRKQKTFQRMDCEVLD 409 (411)
Q Consensus 350 ~y~~~~~~--~~~C~~-~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~~riGfa~~~c~~~~ 409 (411)
+|+++... +..|+. +..........+.||||+.|||++|+|||++++|||||+++|...+
T Consensus 285 ~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~~s~~ 347 (351)
T 1tzs_A 285 AYTLLDFVDGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVPWSHP 347 (351)
T ss_dssp TSEECC-----CCEEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC-----
T ss_pred HhEeeccCCCCCeEEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECCcccch
Confidence 99988642 468985 5543211111235999999999999999999999999999997643
No 5
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=1.1e-55 Score=425.49 Aligned_cols=293 Identities=19% Similarity=0.256 Sum_probs=242.9
Q ss_pred CCCceEEEEEEeCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCCcCCCCCCCCCCCCCCc
Q 038667 56 ISNSLFYVNISIGQPPVPQFTAMDTGSSLLWVHCYPCRDCSPQLGTIFYPSRSSSYAYVPCDSEHCRYFPYARCSAYKHR 135 (411)
Q Consensus 56 ~~~~~Y~~~i~iGtP~q~~~~i~DTGSs~~wv~~~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~C~~~~~~ 135 (411)
..+..|+++|.||||+|++.|+|||||+++||+|..|..| .+.++.|||++|+||+. ..
T Consensus 12 ~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c-~~~~~~y~~~~SsT~~~--------------------~~ 70 (325)
T 2apr_A 12 GNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC-GSGQTKYDPNQSSTYQA--------------------DG 70 (325)
T ss_dssp TTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC-CTTSCCBCGGGCTTCEE--------------------EE
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH-hcCCCCCCcccCCCeee--------------------CC
Confidence 6789999999999999999999999999999999999998 67889999999999998 68
Q ss_pred ceeeEeeCCCCeeeeeEEEEEEEeeCCCCCceeeecEEEEeEeeec--c-CCCcceEEecCCCCCc-------hHHhh--
Q 038667 136 CIYTQLYLIGPETSVFVSTEQLTFKNTDESTIHVQDVVFGCGFSTN--R-NFKFSGIFGLGIGRSS-------LVSQL-- 203 (411)
Q Consensus 136 ~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~--~-~~~~~GilGLg~~~~S-------~~~ql-- 203 (411)
|.|.+.|++|+.+.|.+++|+|+|++ ++++++.|||++... + ...++||||||+...+ +++||
T Consensus 71 ~~~~i~Yg~Gs~~~G~~~~D~v~~g~-----~~v~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~ 145 (325)
T 2apr_A 71 RTWSISYGDGSSASGILAKDNVNLGG-----LLIKGQTIELAKREAASFASGPNDGLLGLGFDTITTVRGVKTPMDNLIS 145 (325)
T ss_dssp EEEEEECTTSCEEEEEEEEEEEEETT-----EEEEEEEEEEEEEECHHHHTSSCSEEEECSCGGGCSSTTCCCHHHHHHH
T ss_pred CEEEEEECCCCCEEEEEEEEEEEECC-----EEECcEEEEEEeccCcccccCCCceEEEeCCcccccccCCCCHHHHHHh
Confidence 89999999999889999999999987 899999999998865 2 3348999999998654 45554
Q ss_pred -----cCceEEecCCCCCCCCCCcceecCCCCCC-CC--CcccccccCCCceEEEeeEEEECCeEEecCCCcccccCCCC
Q 038667 204 -----NSSFSYCIGSLHDPDYLHNKLILGDGAII-DE--GDATPLQFIDGHYYITLEAISVDGRMLDINPNIFKRDDSGG 275 (411)
Q Consensus 204 -----~~~FS~~l~~~~~~~~~~g~l~fGg~~~~-~~--~~~~pl~~~~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~~ 275 (411)
.++||+||.+... ...|.|+|||.+.. +. ..|+|+.....+|.|.+++|+|++ .+.. ...
T Consensus 146 qg~i~~~~FS~~l~~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~-~~~~---------~~~ 213 (325)
T 2apr_A 146 QGLISRPIFGVYLGKAKN--GGGGEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGT-STVA---------SSF 213 (325)
T ss_dssp TTSCSSSEEEEEECCGGG--TCCEEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETT-EEEE---------CCE
T ss_pred cCCCCCceEEEEecCCCC--CCCCEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECC-EecC---------CCc
Confidence 5899999976421 23589999996632 34 459999655789999999999999 3321 146
Q ss_pred cEEEecccccccccHHHHHHHHHHHHHHhhcCCCcCCCCCCCCccccccCCCccCCCeEEEEEcCCcEEEEcCCceEEEc
Q 038667 276 GVMIDSGTDVTWLVKEAYEALRDEVMIRLEGEQMRSYSWPDKLCYHGIMSSDLKGFPTVRFHFRGGAKLALEKDSMFYQP 355 (411)
Q Consensus 276 ~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~g~~~~~~~~~~~~C~~~~~~~~~~~~P~i~~~f~~g~~~~l~~~~y~~~~ 355 (411)
.+||||||++++||+++|+++++++.+.+.+ ......+|+. ..+|+|+|+|+ |.+++||+++|+++.
T Consensus 214 ~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~~-----~g~~~~~C~~-------~~~p~i~f~f~-g~~~~ip~~~~~~~~ 280 (325)
T 2apr_A 214 DGILDTGTTLLILPNNIAASVARAYGASDNG-----DGTYTISCDT-------SAFKPLVFSIN-GASFQVSPDSLVFEE 280 (325)
T ss_dssp EEEECTTCSSEEEEHHHHHHHHHHHTCEECS-----SSCEEECSCG-------GGCCCEEEEET-TEEEEECGGGGEEEE
T ss_pred eEEEecCCccEECCHHHHHHHHHHHhcccCC-----CCeEEEECCC-------CCCCcEEEEEC-CEEEEECHHHEEEcC
Confidence 8999999999999999999999999655432 1111278982 25899999998 569999999999875
Q ss_pred CCCeEEEEEEeCCCCCCcccceeeehhhcceeEEEEECCCCEEEEecCC
Q 038667 356 RPDAFCMAVNPASINNRYVNFSLIGMMAQQFYNVGYDIGRKQKTFQRMD 404 (411)
Q Consensus 356 ~~~~~C~~~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~~riGfa~~~ 404 (411)
. +..|++.+...+. +.||||+.|||++|+|||++++|||||+++
T Consensus 281 ~-~~~C~~~i~~~~~----~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 281 F-QGQCIAGFGYGNW----GFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp E-TTEEEESEEEESS----SSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred C-CCeEEEEEEcCCC----CCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 4 6689875443222 249999999999999999999999999874
No 6
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=2.8e-56 Score=430.38 Aligned_cols=294 Identities=21% Similarity=0.246 Sum_probs=241.8
Q ss_pred CCCceEEEEEEeCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCCcCCCCCCCCCCCCCCc
Q 038667 56 ISNSLFYVNISIGQPPVPQFTAMDTGSSLLWVHCYPCRDCSPQLGTIFYPSRSSSYAYVPCDSEHCRYFPYARCSAYKHR 135 (411)
Q Consensus 56 ~~~~~Y~~~i~iGtP~q~~~~i~DTGSs~~wv~~~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~C~~~~~~ 135 (411)
..+..|+++|.||||+|++.|+|||||+++||+|..|..|..+.++.|||++|+|++.+ ..
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~~~~~y~~~~SsT~~~~-------------------~~ 72 (329)
T 3c9x_A 12 SADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSSATGHAIYTPSKSSTSKKV-------------------SG 72 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCHHHHTTSCCBCGGGCTTCEEC-------------------TT
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCccccCCCCcCCcccCcCceEc-------------------CC
Confidence 57889999999999999999999999999999999999876577899999999999986 56
Q ss_pred ceeeEeeCCCCeeeeeEEEEEEEeeCCCCCceeeecEEEEeEeeec--c--CCCcceEEecCCCCCc---------hHHh
Q 038667 136 CIYTQLYLIGPETSVFVSTEQLTFKNTDESTIHVQDVVFGCGFSTN--R--NFKFSGIFGLGIGRSS---------LVSQ 202 (411)
Q Consensus 136 ~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~--~--~~~~~GilGLg~~~~S---------~~~q 202 (411)
|.|.+.|++|+.+.|.+++|+|+|++ ++++++.|||++... + ...++||||||+...+ ++++
T Consensus 73 ~~~~i~Yg~Gs~~~G~~~~D~v~ig~-----~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~ 147 (329)
T 3c9x_A 73 ASWSISYGDGSSSSGDVYTDKVTIGG-----FSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSN 147 (329)
T ss_dssp CBEEEECTTSCEEEEEEEEEEEEETT-----EEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHH
T ss_pred CeEEEEeCCCCcEEEEEEEEEEEECC-----EEEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHHHH
Confidence 79999999999889999999999987 899999999999865 2 2468999999997654 3444
Q ss_pred h-----cCceEEecCCCCCCCCCCcceecCCCCC-CCCC--cccccccCCCceEEEeeEEEECCeEEecCCCcccccCCC
Q 038667 203 L-----NSSFSYCIGSLHDPDYLHNKLILGDGAI-IDEG--DATPLQFIDGHYYITLEAISVDGRMLDINPNIFKRDDSG 274 (411)
Q Consensus 203 l-----~~~FS~~l~~~~~~~~~~g~l~fGg~~~-~~~~--~~~pl~~~~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~ 274 (411)
| .++||+||.+. ..|.|+|||.+. .+.+ .|+|+.....+|.|.|++|+|+++.+.. ..
T Consensus 148 l~~~i~~~~FS~~l~~~-----~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~~---------~~ 213 (329)
T 3c9x_A 148 AASSLAEPLFTADLRHG-----QNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKLNR---------NS 213 (329)
T ss_dssp HHTTSSSSEEEEECCSS-----SCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCCCS---------CC
T ss_pred HHHhcCCCEEEEEecCC-----CCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEeccC---------CC
Confidence 3 68999999862 248999999663 2344 5999965678999999999999986531 14
Q ss_pred CcEEEecccccccccHHHHHHHHHHHHHHhhcCCCcCCCCCC-CCccccccCCCccCCCeEEEEEcCCcEEEEcCCceEE
Q 038667 275 GGVMIDSGTDVTWLVKEAYEALRDEVMIRLEGEQMRSYSWPD-KLCYHGIMSSDLKGFPTVRFHFRGGAKLALEKDSMFY 353 (411)
Q Consensus 275 ~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~g~~~~~~~~~~-~~C~~~~~~~~~~~~P~i~~~f~~g~~~~l~~~~y~~ 353 (411)
..+||||||++++||++++++|++++..+.. ....... .+|+ ..+|+|+|+|+ |+++.||+++|++
T Consensus 214 ~~aiiDSGTt~~~lp~~~~~~i~~~i~~a~~----~~~~~~~~~~C~--------~~~P~i~f~f~-g~~~~ip~~~~~~ 280 (329)
T 3c9x_A 214 IDGIADTGTTLLLLDDNVVDAYYANVQSAQY----DNQQEGVVFDCD--------EDLPSFSFGVG-SSTITIPGDLLNL 280 (329)
T ss_dssp EEEEECTTCCSEEECHHHHHHHHTTCTTCEE----ETTTTEEEEETT--------CCCCCEEEEET-TEEEEECGGGGEE
T ss_pred ceEEEECCCCcEeCCHHHHHHHHHhCCCcEE----cCCCCEEEEECC--------CCCCcEEEEEC-CEEEEECHHHeee
Confidence 6899999999999999999999988743211 1111112 6898 36899999998 9999999999998
Q ss_pred EcC--CCeEEEEEEeCCCCCCcccceeeehhhcceeEEEEECCCCEEEEecC
Q 038667 354 QPR--PDAFCMAVNPASINNRYVNFSLIGMMAQQFYNVGYDIGRKQKTFQRM 403 (411)
Q Consensus 354 ~~~--~~~~C~~~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~~riGfa~~ 403 (411)
... +...|++.+...+.. +.||||+.|||++|+|||++++|||||+.
T Consensus 281 ~~~~~~~~~C~~~i~~~~~~---~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 281 TPLEEGSSTCFGGLQSSSGI---GINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp EESSTTCSEEEESEEECTTT---TSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred eccCCCCCeEEEEEEcCCCC---CcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 753 347898743332221 24999999999999999999999999974
No 7
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=4.3e-56 Score=430.08 Aligned_cols=288 Identities=20% Similarity=0.282 Sum_probs=241.1
Q ss_pred CCceEEEEEEeCCCCceEEEEEeCCCCceeEeCC--CCCC---------CCCCCCCCCCCCCCCcccccCCCCCcCCCCC
Q 038667 57 SNSLFYVNISIGQPPVPQFTAMDTGSSLLWVHCY--PCRD---------CSPQLGTIFYPSRSSSYAYVPCDSEHCRYFP 125 (411)
Q Consensus 57 ~~~~Y~~~i~iGtP~q~~~~i~DTGSs~~wv~~~--~C~~---------C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~ 125 (411)
.+..|+++|.||||+|++.|+|||||+++||+|. +|.. | ..++.|||++|+||+.
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C--~~~~~y~~~~SsT~~~------------ 75 (334)
T 1j71_A 10 EGPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFC--KQEGTFDPSSSSSAQN------------ 75 (334)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGG--GSSCCBCGGGCTTCEE------------
T ss_pred CCcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccc--cCCCcCCcccCCCccc------------
Confidence 4789999999999999999999999999999876 6763 5 4678999999999998
Q ss_pred CCCCCCCCCcceeeEeeCCCCeeeeeEEEEEEEeeCCCCCceeeecEEEEeEeeeccCCCcceEEecCCCCC--------
Q 038667 126 YARCSAYKHRCIYTQLYLIGPETSVFVSTEQLTFKNTDESTIHVQDVVFGCGFSTNRNFKFSGIFGLGIGRS-------- 197 (411)
Q Consensus 126 ~~~C~~~~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~GilGLg~~~~-------- 197 (411)
..|.|.+.|++|+.+.|.+++|+|+|++ ++++++.|||++... .++||||||++..
T Consensus 76 --------~~~~~~i~Yg~Gs~~~G~~~~D~v~~g~-----~~~~~~~fg~~~~~~---~~~GilGLg~~~~~~~~~~~~ 139 (334)
T 1j71_A 76 --------LNQDFSIEYGDLTSSQGSFYKDTVGFGG-----ISIKNQQFADVTTTS---VDQGIMGIGFTADEAGYNLYD 139 (334)
T ss_dssp --------EEEEEEEEBTTSCEEEEEEEEEEEEETT-----EEEEEEEEEEEEEES---SSSCEEECSCGGGSSTTCCCC
T ss_pred --------CCCceEEEECCCCEEEEEEEEEEEEECC-----EEEccEEEEEEEecC---CCccEEEEcCCcccCccccCC
Confidence 6889999999999889999999999997 899999999999764 5799999999764
Q ss_pred chHHhh-------cCceEEecCCCCCCCCCCcceecCCCCCC-CCC--cccccccCCCceEEEeeEEEECCeEEecCCCc
Q 038667 198 SLVSQL-------NSSFSYCIGSLHDPDYLHNKLILGDGAII-DEG--DATPLQFIDGHYYITLEAISVDGRMLDINPNI 267 (411)
Q Consensus 198 S~~~ql-------~~~FS~~l~~~~~~~~~~g~l~fGg~~~~-~~~--~~~pl~~~~~~y~v~l~~i~v~g~~~~~~~~~ 267 (411)
+++.|| +++||+||.+.. ...|.|+|||.+.. +.+ .|+|+. ...+|.|.|++|+|+++.+..+
T Consensus 140 ~~~~~L~~qg~i~~~~Fs~~l~~~~---~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g~~~~~~--- 212 (334)
T 1j71_A 140 NVPVTLKKQGIINKNAYSLYLNSED---ASTGKIIFGGVDNAKYTGTLTALPVT-SSVELRVHLGSINFDGTSVSTN--- 212 (334)
T ss_dssp CHHHHHHHTTSCSSSEEEEECCCTT---CSEEEEEETEEETTSEEEEEEEEECC-CSSSCEEEEEEEEETTEEEEEE---
T ss_pred cHHHHHHHCCCCCccEEEEEeCCCC---CCCeEEEEeeechHHccCceEEEEcc-CCCeEEEEEeEEEECCEeccCC---
Confidence 566665 589999998742 23489999996533 233 488984 4569999999999999987543
Q ss_pred ccccCCCCcEEEecccccccccHHHHHHHHHHHHHHhhcCCCcCCCCCC-CCccccccCCCccCCCeEEEEEcCCcEEEE
Q 038667 268 FKRDDSGGGVMIDSGTDVTWLVKEAYEALRDEVMIRLEGEQMRSYSWPD-KLCYHGIMSSDLKGFPTVRFHFRGGAKLAL 346 (411)
Q Consensus 268 ~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~g~~~~~~~~~~-~~C~~~~~~~~~~~~P~i~~~f~~g~~~~l 346 (411)
..+||||||++++||++++++|++++.+.+. ....... .+|+ .+|.|+|+|.+|++++|
T Consensus 213 -------~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~----~~~~~~~~~~C~---------~~p~i~f~f~~g~~~~i 272 (334)
T 1j71_A 213 -------ADVVLDSGTTITYFSQSTADKFARIVGATWD----SRNEIYRLPSCD---------LSGDAVFNFDQGVKITV 272 (334)
T ss_dssp -------EEEEECTTCSSEEECHHHHHHHHHHHTCEEE----TTTTEEECSSSC---------CCSEEEEEESTTCEEEE
T ss_pred -------ccEEEeCCCCcEecCHHHHHHHHHHcCCccc----CCCceEEEEcCC---------CCCceEEEEcCCcEEEE
Confidence 6799999999999999999999999964331 1111122 6887 47999999966899999
Q ss_pred cCCceEEEcCCCeEEEEEEeCCCCCCcccceeeehhhcceeEEEEECCCCEEEEecCCCCC
Q 038667 347 EKDSMFYQPRPDAFCMAVNPASINNRYVNFSLIGMMAQQFYNVGYDIGRKQKTFQRMDCEV 407 (411)
Q Consensus 347 ~~~~y~~~~~~~~~C~~~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~~riGfa~~~c~~ 407 (411)
++++|+++..++..|+..+...+ .||||+.|||++|+|||++++|||||+++|..
T Consensus 273 ~~~~y~~~~~~~~~C~~~i~~~~------~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~ 327 (334)
T 1j71_A 273 PLSELILKDSDSSICYFGISRND------ANILGDNFLRRAYIVYDLDDKTISLAQVKYTS 327 (334)
T ss_dssp EGGGGEEECSSSSCEEESEEECT------TCEECHHHHTTEEEEEETTTTEEEEEEECCCS
T ss_pred CHHHheeecCCCCeeEEEEeECC------CcEEChHhhccEEEEEECCCCEEEEEecCCCC
Confidence 99999998755556987555432 29999999999999999999999999999986
No 8
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=4.8e-56 Score=428.73 Aligned_cols=293 Identities=18% Similarity=0.210 Sum_probs=240.1
Q ss_pred CCCceEEEEEEeCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCCcCCCCCCCCCCCCCCc
Q 038667 56 ISNSLFYVNISIGQPPVPQFTAMDTGSSLLWVHCYPCRDCSPQLGTIFYPSRSSSYAYVPCDSEHCRYFPYARCSAYKHR 135 (411)
Q Consensus 56 ~~~~~Y~~~i~iGtP~q~~~~i~DTGSs~~wv~~~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~C~~~~~~ 135 (411)
..+..|+++|.||||+|++.|+|||||+++||+|.+|..|.. .++.|||++|+||+.+ ..
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~-~~~~y~~~~SsT~~~~-------------------~~ 71 (329)
T 1oew_A 12 SLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEV-XQTIYTPSKSTTAKLL-------------------SG 71 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCGGGC--CCCBCGGGCTTCEEE-------------------EE
T ss_pred CCCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCcccc-ccCccCCccCccceec-------------------CC
Confidence 578899999999999999999999999999999999999765 7889999999999986 57
Q ss_pred ceeeEeeCCCCeeeeeEEEEEEEeeCCCCCceeeecEEEEeEeeec--c--CCCcceEEecCCCCCc---------hHHh
Q 038667 136 CIYTQLYLIGPETSVFVSTEQLTFKNTDESTIHVQDVVFGCGFSTN--R--NFKFSGIFGLGIGRSS---------LVSQ 202 (411)
Q Consensus 136 ~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~--~--~~~~~GilGLg~~~~S---------~~~q 202 (411)
|.|.+.|++|+.+.|.+++|+|+|++ ++++++.|||++... + ...++||||||++..+ +++|
T Consensus 72 ~~~~i~Yg~Gs~~~G~~~~D~v~~g~-----~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~ 146 (329)
T 1oew_A 72 ATWSISYGDGSSSSGDVYTDTVSVGG-----LTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDN 146 (329)
T ss_dssp EEEEEECTTSCEEEEEEEEEEEEETT-----EEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHH
T ss_pred CeEEEEeCCCCcEEEEEEEEEEEECC-----EEEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHHH
Confidence 89999999999889999999999997 899999999999865 2 2468999999997654 4444
Q ss_pred h-----cCceEEecCCCCCCCCCCcceecCCCCC-CCCC--cccccccCCCceEEEeeEEEECCeEEecCCCcccccCCC
Q 038667 203 L-----NSSFSYCIGSLHDPDYLHNKLILGDGAI-IDEG--DATPLQFIDGHYYITLEAISVDGRMLDINPNIFKRDDSG 274 (411)
Q Consensus 203 l-----~~~FS~~l~~~~~~~~~~g~l~fGg~~~-~~~~--~~~pl~~~~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~ 274 (411)
| .++||+||.+. ..|.|+|||.+. .+.+ .|+|+.....+|.|.|++|+|+++.+... .
T Consensus 147 l~~~i~~~~FS~~L~~~-----~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~~~---------~ 212 (329)
T 1oew_A 147 AKASLDSPVFTADLGYH-----APGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFKST---------S 212 (329)
T ss_dssp HTTTSSSSEEEEECCSS-----SCEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCEEE---------E
T ss_pred HHHhccCcEEEEEccCC-----CCeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeeccCC---------C
Confidence 4 68999999862 248999999663 2344 59999656789999999999999865421 4
Q ss_pred CcEEEecccccccccHHHHHHHHHHHHHHhhcCCCcCCCCCC-CCccccccCCCccCCCeEEEEEcCCcEEEEcCCceEE
Q 038667 275 GGVMIDSGTDVTWLVKEAYEALRDEVMIRLEGEQMRSYSWPD-KLCYHGIMSSDLKGFPTVRFHFRGGAKLALEKDSMFY 353 (411)
Q Consensus 275 ~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~g~~~~~~~~~~-~~C~~~~~~~~~~~~P~i~~~f~~g~~~~l~~~~y~~ 353 (411)
..+||||||++++||++++++|++++..+.. ....... .+|+ ..+|+|+|+|+ |++++|++++|++
T Consensus 213 ~~aiiDSGTt~~~lP~~~~~~l~~~i~~a~~----~~~~g~~~~~C~--------~~~P~i~f~fg-g~~~~ip~~~~~~ 279 (329)
T 1oew_A 213 IDGIADTGTTLLYLPATVVSAYWAQVSGAKS----SSSVGGYVFPCS--------ATLPSFTFGVG-SARIVIPGDYIDF 279 (329)
T ss_dssp EEEEECTTCCSEEECHHHHHHHHTTSTTCEE----ETTTTEEEEETT--------CCCCCEEEEET-TEEEEECHHHHEE
T ss_pred ceEEEeCCCCCEECCHHHHHHHHHhCCCcEE----cCCCCEEEEECC--------CCCCcEEEEEC-CEEEEECHHHeee
Confidence 6899999999999999999999988842211 1111112 7898 36899999996 9999999999998
Q ss_pred Ec-C-CCeEEEEEEeCCCCCCcccceeeehhhcceeEEEEEC-CCCEEEEecC
Q 038667 354 QP-R-PDAFCMAVNPASINNRYVNFSLIGMMAQQFYNVGYDI-GRKQKTFQRM 403 (411)
Q Consensus 354 ~~-~-~~~~C~~~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~-~~~riGfa~~ 403 (411)
.. . +...|++.+...+.. +.||||+.|||++|+|||+ +++|||||+.
T Consensus 280 ~~~~~~~~~C~~~i~~~~~~---~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 280 GPISTGSSSCFGGIQSSAGI---GINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp EESSTTCSEEEESEEESTTT---SSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred eecCCCCCeEEEEEEeCCCC---CceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 75 2 347898744432221 2499999999999999999 9999999974
No 9
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=4.1e-56 Score=436.19 Aligned_cols=301 Identities=22% Similarity=0.355 Sum_probs=243.7
Q ss_pred ccccCCCceEEEEEEeCCCCceEEEEEeCCCCceeEeCCCCC----CCCCCCCCCCCCCCCCcccccCCCCCcCCCCCCC
Q 038667 52 PSNDISNSLFYVNISIGQPPVPQFTAMDTGSSLLWVHCYPCR----DCSPQLGTIFYPSRSSSYAYVPCDSEHCRYFPYA 127 (411)
Q Consensus 52 ~~~~~~~~~Y~~~i~iGtP~q~~~~i~DTGSs~~wv~~~~C~----~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~ 127 (411)
++.++.+..|+++|.||||||++.|+|||||+++||+|..|. .|. .++.|||++|+||+.
T Consensus 54 ~l~n~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C~--~~~~y~~~~SsT~~~-------------- 117 (383)
T 2x0b_A 54 ILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACV--YHKLFDASDSSSYKH-------------- 117 (383)
T ss_dssp EEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHH--TSCCBCGGGCTTCEE--------------
T ss_pred eeeecCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCccccc--CCCCCCCCCCCcEEE--------------
Confidence 343567899999999999999999999999999999999997 494 678999999999999
Q ss_pred CCCCCCCcceeeEeeCCCCeeeeeEEEEEEEeeCCCCCceeeecEEEEeEeeec---c-CCCcceEEecCCCCCc-----
Q 038667 128 RCSAYKHRCIYTQLYLIGPETSVFVSTEQLTFKNTDESTIHVQDVVFGCGFSTN---R-NFKFSGIFGLGIGRSS----- 198 (411)
Q Consensus 128 ~C~~~~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~---~-~~~~~GilGLg~~~~S----- 198 (411)
..|.|.+.|++|+ +.|.+++|+|+|++ ++++ +.|||++... | ...++||||||++..+
T Consensus 118 ------~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~-----~~v~-~~Fg~a~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~ 184 (383)
T 2x0b_A 118 ------NGTELTLRYSTGT-VSGFLSQDIITVGG-----ITVT-QMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVT 184 (383)
T ss_dssp ------EEEEEEEECSSCE-EEEEEEEEEEEETT-----EEEE-EEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCC
T ss_pred ------CCcEEEEEcCCcc-EEEEEEeeEEEEcC-----ceEE-EEEEEEEecCCcccccCCCceEeccCCCccccCCCC
Confidence 7899999999998 79999999999998 8999 9999999864 3 3568999999998765
Q ss_pred -hHHhh-------cCceEEecCCCCCCC-CCCcceecCCCCCC-CCC--cccccccCCCceEEEeeEEEECCeEEecCCC
Q 038667 199 -LVSQL-------NSSFSYCIGSLHDPD-YLHNKLILGDGAII-DEG--DATPLQFIDGHYYITLEAISVDGRMLDINPN 266 (411)
Q Consensus 199 -~~~ql-------~~~FS~~l~~~~~~~-~~~g~l~fGg~~~~-~~~--~~~pl~~~~~~y~v~l~~i~v~g~~~~~~~~ 266 (411)
++.+| .++||+||.+..... ...|.|+|||.+.. +.+ .|+|+ ....+|.|.|++|+|+++.+...
T Consensus 185 ~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv-~~~~~w~v~l~~i~v~~~~~~~~-- 261 (383)
T 2x0b_A 185 PIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINL-IKTGVWQIQMKGVSVGSSTLLCE-- 261 (383)
T ss_dssp CHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEB-SSTTSCEEEECEEEESSCCCBST--
T ss_pred cHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEc-CCCceEEEEEeEEEeCCceEEcC--
Confidence 33333 689999999864221 12599999997643 344 59999 45789999999999999864321
Q ss_pred cccccCCCCcEEEecccccccccHHHHHHHHHHHHHHhhcCCCcCCCCCC-CCccccccCCCccCCCeEEEEEcCCcEEE
Q 038667 267 IFKRDDSGGGVMIDSGTDVTWLVKEAYEALRDEVMIRLEGEQMRSYSWPD-KLCYHGIMSSDLKGFPTVRFHFRGGAKLA 345 (411)
Q Consensus 267 ~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~g~~~~~~~~~~-~~C~~~~~~~~~~~~P~i~~~f~~g~~~~ 345 (411)
.+..+||||||+++++|.+++++|.+++.+. . ..... ++|+.. ..+|+|+|+|+ |++|+
T Consensus 262 ------~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~------~-~~g~~~v~C~~~------~~~P~i~f~~~-g~~~~ 321 (383)
T 2x0b_A 262 ------DGCLALVDTGASYISGSTSSIEKLMEALGAK------K-RLFDYVVKCNEG------PTLPDISFHLG-GKEYT 321 (383)
T ss_dssp ------TCEEEEECTTCSSEEECHHHHHHHHHHHTCE------E-CSSCEEEEGGGT------TTCCCEEEEET-TEEEE
T ss_pred ------CCcEEEEcCCCceEEcCHHHHHHHHHHhCCc------c-cCCcEEEecccc------ccCceEEEEEC-CEEEE
Confidence 2578999999999999999999999999421 1 11112 789954 37999999998 89999
Q ss_pred EcCCceEEEcCC--CeEEEE-EEeCCCCCCcccceeeehhhcceeEEEEECCCCEEEEecCC
Q 038667 346 LEKDSMFYQPRP--DAFCMA-VNPASINNRYVNFSLIGMMAQQFYNVGYDIGRKQKTFQRMD 404 (411)
Q Consensus 346 l~~~~y~~~~~~--~~~C~~-~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~~riGfa~~~ 404 (411)
|++++|+++... +..|+. +.........++.||||+.|||++|+|||++++|||||+++
T Consensus 322 l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 322 LTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp ECHHHHBCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ECHHHhEeeccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence 999999988642 568984 65442111112359999999999999999999999999874
No 10
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=2.9e-55 Score=423.49 Aligned_cols=297 Identities=21% Similarity=0.359 Sum_probs=242.0
Q ss_pred cCCCceEEEEEEeCCCCceEEEEEeCCCCceeEeCCCCCC--CCCCCCCCCCCCCCCcccccCCCCCcCCCCCCCCCCCC
Q 038667 55 DISNSLFYVNISIGQPPVPQFTAMDTGSSLLWVHCYPCRD--CSPQLGTIFYPSRSSSYAYVPCDSEHCRYFPYARCSAY 132 (411)
Q Consensus 55 ~~~~~~Y~~~i~iGtP~q~~~~i~DTGSs~~wv~~~~C~~--C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~C~~~ 132 (411)
++.+..|+++|.||||+|++.|+|||||+++||+|..|.. | ..++.|||++|+||+.
T Consensus 9 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C--~~~~~y~~~~SsT~~~------------------- 67 (329)
T 1dpj_A 9 NYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLAC--FLHSKYDHEASSSYKA------------------- 67 (329)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHH--HTSCCBCGGGCTTCEE-------------------
T ss_pred ecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCccc--CCcCcCCcccCcCeEE-------------------
Confidence 4568899999999999999999999999999999999998 8 4568999999999998
Q ss_pred CCcceeeEeeCCCCeeeeeEEEEEEEeeCCCCCceeeecEEEEeEeeec---c-CCCcceEEecCCCCCchH------Hh
Q 038667 133 KHRCIYTQLYLIGPETSVFVSTEQLTFKNTDESTIHVQDVVFGCGFSTN---R-NFKFSGIFGLGIGRSSLV------SQ 202 (411)
Q Consensus 133 ~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~---~-~~~~~GilGLg~~~~S~~------~q 202 (411)
..|.|.+.|++|+ +.|.+++|+|+|++ ++++++.|||++... + ...++||||||+...++. .|
T Consensus 68 -~~~~~~i~Yg~Gs-~~G~~~~D~v~ig~-----~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~ 140 (329)
T 1dpj_A 68 -NGTEFAIQYGTGS-LEGYISQDTLSIGD-----LTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYN 140 (329)
T ss_dssp -EEEEEEEEETTEE-EEEEEEEEEEEETT-----EEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCHHHH
T ss_pred -CCcEEEEEECCce-EEEEEEEEEEEECC-----eEECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCCCHHHH
Confidence 7899999999995 79999999999987 899999999998764 2 346899999999876532 23
Q ss_pred h-------cCceEEecCCCCCCCCCCcceecCCCCCC-CCC--cccccccCCCceEEEeeEEEECCeEEecCCCcccccC
Q 038667 203 L-------NSSFSYCIGSLHDPDYLHNKLILGDGAII-DEG--DATPLQFIDGHYYITLEAISVDGRMLDINPNIFKRDD 272 (411)
Q Consensus 203 l-------~~~FS~~l~~~~~~~~~~g~l~fGg~~~~-~~~--~~~pl~~~~~~y~v~l~~i~v~g~~~~~~~~~~~~~~ 272 (411)
| .++||+||.+........|.|+|||.+.. +.+ .|+|+. ...+|.|.|++|+|+++.+...
T Consensus 141 l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~~-------- 211 (329)
T 1dpj_A 141 AIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVR-RKAYWEVKFEGIGLGDEYAELE-------- 211 (329)
T ss_dssp HHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECS-SBTTBEEEEEEEEETTEEEECS--------
T ss_pred HHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcC-CCceEEEEeeeEEECCeEecCC--------
Confidence 2 68999999875322223599999996642 233 589984 5679999999999999987643
Q ss_pred CCCcEEEecccccccccHHHHHHHHHHHHHHhhcCCCcCCCCCC-CCccccccCCCccCCCeEEEEEcCCcEEEEcCCce
Q 038667 273 SGGGVMIDSGTDVTWLVKEAYEALRDEVMIRLEGEQMRSYSWPD-KLCYHGIMSSDLKGFPTVRFHFRGGAKLALEKDSM 351 (411)
Q Consensus 273 ~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~g~~~~~~~~~~-~~C~~~~~~~~~~~~P~i~~~f~~g~~~~l~~~~y 351 (411)
+..+||||||++++||.+++++|.+++.+. ....... .+|... ..+|+|+|+|+ |++++|++++|
T Consensus 212 -~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~------~~~~g~~~~~C~~~------~~~P~i~f~f~-g~~~~i~~~~y 277 (329)
T 1dpj_A 212 -SHGAAIDTGTSLITLPSGLAEMINAEIGAK------KGWTGQYTLDCNTR------DNLPDLIFNFN-GYNFTIGPYDY 277 (329)
T ss_dssp -SCEEEECTTCSCEEECHHHHHHHHHHHTCE------ECTTSSEEECGGGG------GGCCCEEEEET-TEEEEECTTTS
T ss_pred -CccEEeeCCCCcEECCHHHHHHHHHHhCCc------cCCCCeEEEECCCC------CcCCcEEEEEC-CEEEEECHHHh
Confidence 578999999999999999999999998422 1111111 689843 37899999998 89999999999
Q ss_pred EEEcCCCeEEEE-EEeCCCCCCcccceeeehhhcceeEEEEECCCCEEEEecCC
Q 038667 352 FYQPRPDAFCMA-VNPASINNRYVNFSLIGMMAQQFYNVGYDIGRKQKTFQRMD 404 (411)
Q Consensus 352 ~~~~~~~~~C~~-~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~~riGfa~~~ 404 (411)
+++.. ..|+. +.........++.||||+.|||++|+|||++++|||||+++
T Consensus 278 ~~~~~--~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 278 TLEVS--GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp EEEET--TEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EecCC--CEEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 99864 57984 55432110112359999999999999999999999999874
No 11
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=2e-55 Score=429.86 Aligned_cols=303 Identities=19% Similarity=0.245 Sum_probs=247.3
Q ss_pred ccccCCCceEEEEEEeCCCCceEEEEEeCCCCceeEeCCCCC---CCCCCCCCCCCCCCCCcccccCCCCCcCCCCCCCC
Q 038667 52 PSNDISNSLFYVNISIGQPPVPQFTAMDTGSSLLWVHCYPCR---DCSPQLGTIFYPSRSSSYAYVPCDSEHCRYFPYAR 128 (411)
Q Consensus 52 ~~~~~~~~~Y~~~i~iGtP~q~~~~i~DTGSs~~wv~~~~C~---~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~ 128 (411)
|+.+..+..|+++|.||||+|++.|+|||||+++||+|..|. .|. .++.|||++|+||+.
T Consensus 11 ~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~--~~~~y~~~~SsT~~~--------------- 73 (361)
T 1mpp_A 11 GLYDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCV--GKRFFDPSSSSTFKE--------------- 73 (361)
T ss_dssp EEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCC--SSCCBCGGGCTTCEE---------------
T ss_pred EeecCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCC--CCCcCCCccCCceEe---------------
Confidence 443567899999999999999999999999999999999999 694 578999999999998
Q ss_pred CCCCCCcceeeEeeCCCCeeeeeEEEEEEEeeCCCCCceeeecEEEEeEeeec--------c-CCCcceEEecCCCCCch
Q 038667 129 CSAYKHRCIYTQLYLIGPETSVFVSTEQLTFKNTDESTIHVQDVVFGCGFSTN--------R-NFKFSGIFGLGIGRSSL 199 (411)
Q Consensus 129 C~~~~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~--------~-~~~~~GilGLg~~~~S~ 199 (411)
..|.|.+.|++|+ +.|.+++|+|+|++ ++++++.|||++... + ...++||||||++..++
T Consensus 74 -----~~~~~~i~Yg~Gs-~~G~~~~D~v~~g~-----~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~s~ 142 (361)
T 1mpp_A 74 -----TDYNLNITYGTGG-ANGIYFRDSITVGG-----ATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTA 142 (361)
T ss_dssp -----EEEEEEEECSSCE-EEEEEEEEEEEETT-----EEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSH
T ss_pred -----cCCeEEEEECCce-EEEEEEEEEEEECC-----EEEeceEEEEEEeccCccccccccccCCCCCEEEeCCccccc
Confidence 6789999999998 79999999999997 899999999998752 2 24589999999986554
Q ss_pred ------------HHhh-------cCceEEecCCCCCCCCCCcceecCCCCCC-CC--CcccccccCCC---ceEEEeeEE
Q 038667 200 ------------VSQL-------NSSFSYCIGSLHDPDYLHNKLILGDGAII-DE--GDATPLQFIDG---HYYITLEAI 254 (411)
Q Consensus 200 ------------~~ql-------~~~FS~~l~~~~~~~~~~g~l~fGg~~~~-~~--~~~~pl~~~~~---~y~v~l~~i 254 (411)
+.|| .++||+||.+. ...|.|+|||.+.. +. ..|+|+..... +|.|.|++|
T Consensus 143 ~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~----~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~~i 218 (361)
T 1mpp_A 143 MEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTN----DGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGV 218 (361)
T ss_dssp HHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCS----SSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEE
T ss_pred ccccccccCCCHHHHHHHcCCCCCcEEEEEecCC----CCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEeEE
Confidence 3344 58999999974 23489999996632 33 45999953333 999999999
Q ss_pred EECCeEEecCCCcccccCCCCcEE-EecccccccccHHHHHHHHHHHHHHhhcCCCcCCCCCC-CCccccccCCCccCC-
Q 038667 255 SVDGRMLDINPNIFKRDDSGGGVM-IDSGTDVTWLVKEAYEALRDEVMIRLEGEQMRSYSWPD-KLCYHGIMSSDLKGF- 331 (411)
Q Consensus 255 ~v~g~~~~~~~~~~~~~~~~~~~i-iDSGTt~~~lp~~~~~~l~~~l~~~~~g~~~~~~~~~~-~~C~~~~~~~~~~~~- 331 (411)
+|+++.+... ....+| |||||++++||.+++++|++++.+.+. ...... .+|+.. ..+
T Consensus 219 ~v~~~~~~~~--------~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~-----~~~g~~~~~C~~~------~~~~ 279 (361)
T 1mpp_A 219 KIDGSDAVSF--------DGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDAT-----ESQQGYTVPCSKY------QDSK 279 (361)
T ss_dssp EETTEEEEEE--------EEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCE-----EETTEEEEEHHHH------TTCC
T ss_pred EECCeeeccC--------CCCEEEEECCCCCceeCCHHHHHHHHHHhCCccc-----CCCCcEEEECCCc------ccCC
Confidence 9999887532 146899 999999999999999999999954321 111112 789853 267
Q ss_pred CeEEEEE--cC----CcEEEEcCCceEEEcC-CCeEEE-EEEeCCCCCCcccceeeehhhcceeEEEEECCCCEEEEecC
Q 038667 332 PTVRFHF--RG----GAKLALEKDSMFYQPR-PDAFCM-AVNPASINNRYVNFSLIGMMAQQFYNVGYDIGRKQKTFQRM 403 (411)
Q Consensus 332 P~i~~~f--~~----g~~~~l~~~~y~~~~~-~~~~C~-~~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~~riGfa~~ 403 (411)
|+|+|+| ++ |++++|++++|+++.. ++..|+ ++.... . +.||||+.|||++|+|||++++|||||++
T Consensus 280 p~i~f~f~~g~~~~~g~~~~i~~~~y~~~~~~~~~~C~~~i~~~~-~----~~~iLG~~fl~~~yvvfD~~~~~igfa~~ 354 (361)
T 1mpp_A 280 TTFSLVLQKSGSSSDTIDVSVPISKMLLPVDKSGETCMFIVLPDG-G----NQFIVGNLFLRFFVNVYDFGKNRIGFAPL 354 (361)
T ss_dssp CEEEEEEECTTCSSCEEEEEEEGGGGEEECSSSSCEEEESEEEES-S----SCCEEEHHHHTTEEEEEETTTTEEEEEEB
T ss_pred CcEEEEEEcCCcCCCCeEEEECHHHhEEecCCCCCeeEEEEEeCC-C----CCEEEChHHhccEEEEEECCCCEEEEEEc
Confidence 9999999 42 7999999999999875 456897 565541 1 24999999999999999999999999999
Q ss_pred CCCCccC
Q 038667 404 DCEVLDD 410 (411)
Q Consensus 404 ~c~~~~~ 410 (411)
+|....|
T Consensus 355 ~~~~~~~ 361 (361)
T 1mpp_A 355 ASGYEND 361 (361)
T ss_dssp CTTTCCC
T ss_pred ccCCCCC
Confidence 9997544
No 12
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=1.4e-55 Score=427.84 Aligned_cols=290 Identities=20% Similarity=0.306 Sum_probs=241.0
Q ss_pred CCceEEEEEEeCCCCceEEEEEeCCCCceeEeCC--CCCC---------CCCCCCCCCCCCCCCcccccCCCCCcCCCCC
Q 038667 57 SNSLFYVNISIGQPPVPQFTAMDTGSSLLWVHCY--PCRD---------CSPQLGTIFYPSRSSSYAYVPCDSEHCRYFP 125 (411)
Q Consensus 57 ~~~~Y~~~i~iGtP~q~~~~i~DTGSs~~wv~~~--~C~~---------C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~ 125 (411)
.+..|+++|.||||+|++.|+|||||+++||+|. +|.. | ..++.|||++|+||+.
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C--~~~~~y~~~~SsT~~~------------ 75 (342)
T 2qzx_A 10 EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFC--KSAGSYSPASSRTSQN------------ 75 (342)
T ss_dssp CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGG--GTTCCBCGGGCTTCEE------------
T ss_pred CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccc--cCCCcCCcccCCCccc------------
Confidence 5789999999999999999999999999999866 6763 5 4678999999999998
Q ss_pred CCCCCCCCCcceeeEeeCCCCeeeeeEEEEEEEeeCCCCCceeeecEEEEeEeeeccCCCcceEEecCCCCC--------
Q 038667 126 YARCSAYKHRCIYTQLYLIGPETSVFVSTEQLTFKNTDESTIHVQDVVFGCGFSTNRNFKFSGIFGLGIGRS-------- 197 (411)
Q Consensus 126 ~~~C~~~~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~GilGLg~~~~-------- 197 (411)
..|.|.+.|++|+.+.|.+++|+|+|++ ++++++.|||++... .++||||||+...
T Consensus 76 --------~~~~~~i~Yg~Gs~~~G~~~~D~v~~g~-----~~v~~~~fg~~~~~~---~~~GilGLg~~~~~~~~~~~~ 139 (342)
T 2qzx_A 76 --------LNTRFDIKYGDGSYAKGKLYKDTVGIGG-----VSVRDQLFANVWSTS---ARKGILGIGFQSGEATEFDYD 139 (342)
T ss_dssp --------EEEEEEEECTTSCEEEEEEEEEEEEETT-----EEEEEEEEEEEEEEC---SSSCEEECSCGGGCSSSSCCC
T ss_pred --------CCCcEEEEeCCCCeEEEEEEEEEEEECC-----EEecceEEEEEEecC---CCcCEEEEccccccCCCccCc
Confidence 6889999999999889999999999997 899999999999764 5799999999754
Q ss_pred chHHhh-------cCceEEecCCCCCCCCCCcceecCCCCCC-CCC--cccccccCCCceEEEeeEEEECCeEEecCCCc
Q 038667 198 SLVSQL-------NSSFSYCIGSLHDPDYLHNKLILGDGAII-DEG--DATPLQFIDGHYYITLEAISVDGRMLDINPNI 267 (411)
Q Consensus 198 S~~~ql-------~~~FS~~l~~~~~~~~~~g~l~fGg~~~~-~~~--~~~pl~~~~~~y~v~l~~i~v~g~~~~~~~~~ 267 (411)
+++.|| .++||+||.+.. ...|.|+|||.+.. +.+ .|+|+. ...+|.|.|++|+|+++.+..+
T Consensus 140 ~~~~~L~~qg~i~~~~Fs~~l~~~~---~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g~~~~~~--- 212 (342)
T 2qzx_A 140 NLPISLRNQGIIGKAAYSLYLNSAE---ASTGQIIFGGIDKAKYSGSLVDLPIT-SEKKLTVGLRSVNVRGRNVDAN--- 212 (342)
T ss_dssp CHHHHHHHTTSSSSSEEEEECCCTT---CSEEEEEETEEETTSBSSCCEEEECC-CSSSCEEEEEEEEETTEEEEEE---
T ss_pred cHHHHHHHCCCcCccEEEEEeCCCC---CCCeEEEECccchhhEecceEEEecc-CCceEEEEEeEEEECCEecCCC---
Confidence 566665 589999998742 23489999996532 344 589994 4569999999999999987643
Q ss_pred ccccCCCCcEEEecccccccccHHHHHHHHHHHHHHhhcCCCcCCCC-C-CCCccccccCCCccCCCeEEEEEcCCcEEE
Q 038667 268 FKRDDSGGGVMIDSGTDVTWLVKEAYEALRDEVMIRLEGEQMRSYSW-P-DKLCYHGIMSSDLKGFPTVRFHFRGGAKLA 345 (411)
Q Consensus 268 ~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~g~~~~~~~~-~-~~~C~~~~~~~~~~~~P~i~~~f~~g~~~~ 345 (411)
..+||||||++++||++++++|++++.+.+. ...... . ..+|+ .+|+|+|+|++|++++
T Consensus 213 -------~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~---~~~~~~~~~~~~C~---------~~p~i~f~f~~g~~~~ 273 (342)
T 2qzx_A 213 -------TNVLLDSGTTISYFTRSIVRNILYAIGAQMK---FDSAGNKVYVADCK---------TSGTIDFQFGNNLKIS 273 (342)
T ss_dssp -------EEEEECTTCSSEEECHHHHHHHHHHHTCEEE---ECTTSCEEEEECTT---------CCCEEEEEETTTEEEE
T ss_pred -------cCEEEeCCCCCEEcCHHHHHHHHHHhCCeee---eccCCCcEEEEECC---------CCCcEEEEECCCcEEE
Confidence 6799999999999999999999999965432 011111 1 17897 4799999996689999
Q ss_pred EcCCceEEEc-----CCCeEEEEEEeCCCCCCcccceeeehhhcceeEEEEECCCCEEEEecCCCCCc
Q 038667 346 LEKDSMFYQP-----RPDAFCMAVNPASINNRYVNFSLIGMMAQQFYNVGYDIGRKQKTFQRMDCEVL 408 (411)
Q Consensus 346 l~~~~y~~~~-----~~~~~C~~~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~~riGfa~~~c~~~ 408 (411)
|++++|+++. +.+..|+..+...+ .||||+.|||++|+|||++++|||||+++|...
T Consensus 274 i~~~~~~~~~~~~~~~~~~~C~~~i~~~~------~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~ 335 (342)
T 2qzx_A 274 VPVSEFLFQTYYTSGKPFPKCEVRIRESE------DNILGDNFLRSAYVVYNLDDKKISMAPVKYTSE 335 (342)
T ss_dssp EEGGGGEECCBCTTSCBCSSEEESEEECS------SCEECHHHHTTEEEEEETTTTEEEEEEBCCCSC
T ss_pred EcHHHhcccccccCCCCCCccEEEEecCC------CcEeChHhhhcEEEEEECCCCEEEEEeeCCCCC
Confidence 9999999974 23468987555432 299999999999999999999999999999863
No 13
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=1.1e-55 Score=425.33 Aligned_cols=292 Identities=18% Similarity=0.269 Sum_probs=240.5
Q ss_pred cccCCCceEEEEEEeCCCCceEEEEEeCCCCceeEeCCCCC--CCCCCCCCCCCCCCCCcccccCCCCCcCCCCCCCCCC
Q 038667 53 SNDISNSLFYVNISIGQPPVPQFTAMDTGSSLLWVHCYPCR--DCSPQLGTIFYPSRSSSYAYVPCDSEHCRYFPYARCS 130 (411)
Q Consensus 53 ~~~~~~~~Y~~~i~iGtP~q~~~~i~DTGSs~~wv~~~~C~--~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~C~ 130 (411)
+.++.+..|+++|.||||||++.|+|||||+++||+|..|. .| ..++.|||++|+||+.
T Consensus 8 l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C--~~~~~y~~~~SsT~~~----------------- 68 (323)
T 3cms_A 8 LTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNAC--KNHQRFDPRKSSTFQN----------------- 68 (323)
T ss_dssp EEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHH--HTSCCBCGGGCTTCEE-----------------
T ss_pred eEeccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCcccc--cCCCCCCCccCCCeEE-----------------
Confidence 33467899999999999999999999999999999999995 48 4678999999999998
Q ss_pred CCCCcceeeEeeCCCCeeeeeEEEEEEEeeCCCCCceeeecEEEEeEeeec---c-CCCcceEEecCCCCCc------hH
Q 038667 131 AYKHRCIYTQLYLIGPETSVFVSTEQLTFKNTDESTIHVQDVVFGCGFSTN---R-NFKFSGIFGLGIGRSS------LV 200 (411)
Q Consensus 131 ~~~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~---~-~~~~~GilGLg~~~~S------~~ 200 (411)
..|.|.+.|++|+ +.|.+++|+|+|++ ++++++.|||++... + ...++||||||++..+ ++
T Consensus 69 ---~~~~~~i~Yg~Gs-~~G~~~~D~v~ig~-----~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~ 139 (323)
T 3cms_A 69 ---LGKPLSIHYGTGS-MQGILGYDTVTVSN-----IVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPVF 139 (323)
T ss_dssp ---EEEEEEEEETTEE-EEEEEEEEEEEETT-----EEEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTCCCHH
T ss_pred ---CCcEEEEEeCCCC-eEEEEEEEEEEECC-----eEEeccEEEEEEecccccccccCCceEEecCcchhhccCCCCHH
Confidence 6889999999998 79999999999987 899999999999763 2 2458999999998654 34
Q ss_pred Hhh-------cCceEEecCCCCCCCCCCcceecCCCCCC-CCC--cccccccCCCceEEEeeEEEECCeEEecCCCcccc
Q 038667 201 SQL-------NSSFSYCIGSLHDPDYLHNKLILGDGAII-DEG--DATPLQFIDGHYYITLEAISVDGRMLDINPNIFKR 270 (411)
Q Consensus 201 ~ql-------~~~FS~~l~~~~~~~~~~g~l~fGg~~~~-~~~--~~~pl~~~~~~y~v~l~~i~v~g~~~~~~~~~~~~ 270 (411)
.+| .++||+||.+... .|.|+|||.+.. +.+ .|+|+. ...+|.|.|++|+|+++.+..+
T Consensus 140 ~~l~~q~~i~~~~FS~~l~~~~~----~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~~------ 208 (323)
T 3cms_A 140 DNMMNRHLVAQDLFSVYMDRNGQ----ESMLTLGAIDPSYYTGSLHWVPVT-VQQYWQFTVDSVTISGVVVACE------ 208 (323)
T ss_dssp HHHHHTTCSSSSEEEEECCTTSS----CEEEEESCCCGGGEEEEEEEEECS-SBTTBEEEEEEEEETTEEEEST------
T ss_pred HHHHHCCCCCCCEEEEEECCCCC----CEEEEECCCChhhccCceEEEECc-cCCeEEEEEeeEEECCEEeecC------
Confidence 443 6899999987532 289999997643 233 589994 5679999999999999987643
Q ss_pred cCCCCcEEEecccccccccHHHHHHHHHHHHHHhhcCCCcCCCCCC-CCccccccCCCccCCCeEEEEEcCCcEEEEcCC
Q 038667 271 DDSGGGVMIDSGTDVTWLVKEAYEALRDEVMIRLEGEQMRSYSWPD-KLCYHGIMSSDLKGFPTVRFHFRGGAKLALEKD 349 (411)
Q Consensus 271 ~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~g~~~~~~~~~~-~~C~~~~~~~~~~~~P~i~~~f~~g~~~~l~~~ 349 (411)
.+..+||||||++++||.+++++|++++.+.. ...... .+|+.. ..+|+|+|+|+ |++++|+++
T Consensus 209 --~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~------~~~g~~~~~C~~~------~~~P~i~f~f~-g~~~~i~~~ 273 (323)
T 3cms_A 209 --GGCQAILDTGTSKLVGPSSDILNIQQAIGATQ------NQYGEFDIDCDNL------SYMPTVVFEIN-GKMYPLTPS 273 (323)
T ss_dssp --TCEEEEECTTCCSEEECHHHHHHHHHHHTCEE------ETTTEEEECTTCT------TTSCCEEEEET-TEEEEECHH
T ss_pred --CCcEEEEecCCccEeCCHHHHHHHHHHhCCee------cCCCcEEEECCCC------ccCceEEEEEC-CEEEEECHH
Confidence 24689999999999999999999999984321 111111 789843 37899999997 899999999
Q ss_pred ceEEEcCCCeEEEE-EEeCCCCCCcccceeeehhhcceeEEEEECCCCEEEEecCC
Q 038667 350 SMFYQPRPDAFCMA-VNPASINNRYVNFSLIGMMAQQFYNVGYDIGRKQKTFQRMD 404 (411)
Q Consensus 350 ~y~~~~~~~~~C~~-~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~~riGfa~~~ 404 (411)
+|+++ .+..|+. +...... +.||||+.|||++|+|||++++|||||+++
T Consensus 274 ~y~~~--~~~~C~~~i~~~~~~----~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 274 AYTSQ--DQGFCTSGFQSENHS----QKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp HHEEE--ETTEEEESEEEC-------CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred HhccC--CCCEEEEEEEeCCCC----CcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 99998 4568986 5554311 249999999999999999999999999874
No 14
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=2.2e-55 Score=422.71 Aligned_cols=294 Identities=21% Similarity=0.316 Sum_probs=241.5
Q ss_pred ccccCCCceEEEEEEeCCCCceEEEEEeCCCCceeEeCCCCCC--CCCCCCCCCCCCCCCcccccCCCCCcCCCCCCCCC
Q 038667 52 PSNDISNSLFYVNISIGQPPVPQFTAMDTGSSLLWVHCYPCRD--CSPQLGTIFYPSRSSSYAYVPCDSEHCRYFPYARC 129 (411)
Q Consensus 52 ~~~~~~~~~Y~~~i~iGtP~q~~~~i~DTGSs~~wv~~~~C~~--C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~C 129 (411)
|+.++.+..|+++|.||||||++.|+|||||+++||+|..|.. | ..++.|||++|+|++.
T Consensus 4 ~l~n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C--~~~~~y~~~~SsT~~~---------------- 65 (320)
T 4aa9_A 4 PLTSYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVC--KNHHRFDPRKSSTFRN---------------- 65 (320)
T ss_dssp ----CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHH--HTSCCBCGGGCTTCEE----------------
T ss_pred cceeccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCcccc--CCCCCCCCCCCcCeEc----------------
Confidence 3445678999999999999999999999999999999999986 7 4679999999999999
Q ss_pred CCCCCcceeeEeeCCCCeeeeeEEEEEEEeeCCCCCceeeecEEEEeEeeec---c-CCCcceEEecCCCCCc------h
Q 038667 130 SAYKHRCIYTQLYLIGPETSVFVSTEQLTFKNTDESTIHVQDVVFGCGFSTN---R-NFKFSGIFGLGIGRSS------L 199 (411)
Q Consensus 130 ~~~~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~---~-~~~~~GilGLg~~~~S------~ 199 (411)
..|.|.+.|++|+ +.|.+++|+|+|++ ++++++.|||++... + ...++||||||++..+ +
T Consensus 66 ----~~~~~~i~Yg~gs-~~G~~~~D~v~ig~-----~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~ 135 (320)
T 4aa9_A 66 ----LGKPLSIHYGTGS-MEGFLGYDTVTVSN-----IVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPV 135 (320)
T ss_dssp ----EEEEEEEEETTEE-EEEEEEEEEEEETT-----EEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCH
T ss_pred ----CCcEEEEEECCcE-EEEEEEEEEEEECC-----EeecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCH
Confidence 6889999999998 79999999999998 899999999998765 2 3457999999987543 4
Q ss_pred HHhh-------cCceEEecCCCCCCCCCCcceecCCCCCC-CCC--cccccccCCCceEEEeeEEEECCeEEecCCCccc
Q 038667 200 VSQL-------NSSFSYCIGSLHDPDYLHNKLILGDGAII-DEG--DATPLQFIDGHYYITLEAISVDGRMLDINPNIFK 269 (411)
Q Consensus 200 ~~ql-------~~~FS~~l~~~~~~~~~~g~l~fGg~~~~-~~~--~~~pl~~~~~~y~v~l~~i~v~g~~~~~~~~~~~ 269 (411)
+.+| .++||+||.+. ...|.|+|||.+.. +.+ .|+|+ ....+|.|.+++|+|+++.+..+
T Consensus 136 ~~~l~~~g~i~~~~Fs~~l~~~----~~~G~l~fGg~d~~~~~g~l~~~p~-~~~~~w~v~l~~i~v~~~~~~~~----- 205 (320)
T 4aa9_A 136 FDNMMDRHLVARDLFSVYMDRN----GQGSMLTLGAIDPSYYTGSLHWVPV-TLQQYWQFTVDSVTINGVAVACV----- 205 (320)
T ss_dssp HHHHHHTTCSSSSEEEEECCSS----SSCCEEEETCCCGGGEEEEEEEEEC-SSBTTBEEEECEEEETTEEEEST-----
T ss_pred HHHHHhCCCCCCceEEEEeCCC----CCCeEEEEcccCHHHccCceEEEEc-ccCCceEEEEeEEEECCEEeccC-----
Confidence 5554 57899999985 23489999997643 233 58998 45689999999999999987643
Q ss_pred ccCCCCcEEEecccccccccHHHHHHHHHHHHHHhhcCCCcCCCCCCCCccccccCCCccCCCeEEEEEcCCcEEEEcCC
Q 038667 270 RDDSGGGVMIDSGTDVTWLVKEAYEALRDEVMIRLEGEQMRSYSWPDKLCYHGIMSSDLKGFPTVRFHFRGGAKLALEKD 349 (411)
Q Consensus 270 ~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~g~~~~~~~~~~~~C~~~~~~~~~~~~P~i~~~f~~g~~~~l~~~ 349 (411)
....+||||||++++||++++++|++++.+.. ........+|+.. ..+|+|+|+|+ |++++|+++
T Consensus 206 ---~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~-----~~~g~~~~~C~~~------~~~p~i~f~f~-g~~~~l~~~ 270 (320)
T 4aa9_A 206 ---GGCQAILDTGTSVLFGPSSDILKIQMAIGATE-----NRYGEFDVNCGNL------RSMPTVVFEIN-GRDYPLSPS 270 (320)
T ss_dssp ---TCEEEEECTTCSSEEEEHHHHHHHHHHTTCEE-----CTTSCEEECGGGG------GGCCCEEEEET-TEEEEECHH
T ss_pred ---CCcEEEEECCCCcEECCHHHHHHHHHHhCCcc-----cCCCcEEEeCCCC------CcCceEEEEEC-CEEEEECHH
Confidence 24689999999999999999999999984321 1111112789854 37899999998 999999999
Q ss_pred ceEEEcCCCeEEEE-EEeCCCCCCcccceeeehhhcceeEEEEECCCCEEEEecCC
Q 038667 350 SMFYQPRPDAFCMA-VNPASINNRYVNFSLIGMMAQQFYNVGYDIGRKQKTFQRMD 404 (411)
Q Consensus 350 ~y~~~~~~~~~C~~-~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~~riGfa~~~ 404 (411)
+|+.+ .+..|+. +...... +.||||+.|||++|+|||++++|||||+++
T Consensus 271 ~y~~~--~~~~C~~~i~~~~~~----~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 271 AYTSK--DQGFCTSGFQGDNNS----ELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp HHEEE--ETTEEEESEEEETTC----CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred HhccC--CCCeEEEEEEcCCCC----CcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 99987 4568985 5543222 249999999999999999999999999975
No 15
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=4.3e-55 Score=421.39 Aligned_cols=293 Identities=20% Similarity=0.315 Sum_probs=240.9
Q ss_pred cCCCceEEEEEEeCCCCceEEEEEeCCCCceeEeCCCCCC--CCCCCCCCCCCCCCCcccccCCCCCcCCCCCCCCCCCC
Q 038667 55 DISNSLFYVNISIGQPPVPQFTAMDTGSSLLWVHCYPCRD--CSPQLGTIFYPSRSSSYAYVPCDSEHCRYFPYARCSAY 132 (411)
Q Consensus 55 ~~~~~~Y~~~i~iGtP~q~~~~i~DTGSs~~wv~~~~C~~--C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~C~~~ 132 (411)
+..+..|+++|.||||||++.|+|||||+++||+|..|.. | ..++.|||++|+|++.
T Consensus 8 n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C--~~~~~y~~~~SsT~~~------------------- 66 (324)
T 1am5_A 8 NEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQAC--SNHNKFKPRQSSTYVE------------------- 66 (324)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHH--HTSCCBCGGGCTTCEE-------------------
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccc--cCCCcCCCccCCCeEe-------------------
Confidence 4578999999999999999999999999999999999985 8 4578999999999998
Q ss_pred CCcceeeEeeCCCCeeeeeEEEEEEEeeCCCCCceeeecEEEEeEeeec---c-CCCcceEEecCCCCCc------hHHh
Q 038667 133 KHRCIYTQLYLIGPETSVFVSTEQLTFKNTDESTIHVQDVVFGCGFSTN---R-NFKFSGIFGLGIGRSS------LVSQ 202 (411)
Q Consensus 133 ~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~---~-~~~~~GilGLg~~~~S------~~~q 202 (411)
..|.|.+.|++|+. .|.+++|+|+|++ ++++++.|||++... + ...++||||||++..+ ++.|
T Consensus 67 -~~~~~~i~Yg~Gs~-~G~~~~D~v~~g~-----~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~ 139 (324)
T 1am5_A 67 -TGKTVDLTYGTGGM-RGILGQDTVSVGG-----GSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDN 139 (324)
T ss_dssp -EEEEEEEECSSCEE-EEEEEEEEEESSS-----SCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCHHHH
T ss_pred -CCcEEEEEECCCCe-EEEEEECceeECC-----cEEcccEEEEEEecccccccCCCCceEEecCCccccccCCCchHHh
Confidence 68899999999984 9999999999997 789999999999864 3 3468999999998665 3444
Q ss_pred h-------cCceEEecCCCCCCCCCCcceecCCCCCC-CC--CcccccccCCCceEEEeeEEEECCeEEecCCCcccccC
Q 038667 203 L-------NSSFSYCIGSLHDPDYLHNKLILGDGAII-DE--GDATPLQFIDGHYYITLEAISVDGRMLDINPNIFKRDD 272 (411)
Q Consensus 203 l-------~~~FS~~l~~~~~~~~~~g~l~fGg~~~~-~~--~~~~pl~~~~~~y~v~l~~i~v~g~~~~~~~~~~~~~~ 272 (411)
| .++||+||.+... ..|.|+|||.+.. +. ..|+|+. ...+|.|.+++|+|+++.+...
T Consensus 140 l~~qg~i~~~~FS~~l~~~~~---~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~~-------- 207 (324)
T 1am5_A 140 MGSQSLVEKDLFSFYLSGGGA---NGSEVMLGGVDNSHYTGSIHWIPVT-AEKYWQVALDGITVNGQTAACE-------- 207 (324)
T ss_dssp HHHTTCSSSSEEEEECCSTTC---SCEEEEESSCCGGGBCSCCEEEEEE-EETTEEEEECEEEETTEECCCC--------
T ss_pred HHhcCCCCCCEEEEEecCCCC---CCcEEEECccCHHHcCCceEEEecC-CCcEEEEEEeEEEECCceeecc--------
Confidence 4 6899999988532 2599999996632 33 4589984 4679999999999999875322
Q ss_pred CCCcEEEecccccccccHHHHHHHHHHHHHHhhcCCCcCCCCCC-CCccccccCCCccCCCeEEEEEcCCcEEEEcCCce
Q 038667 273 SGGGVMIDSGTDVTWLVKEAYEALRDEVMIRLEGEQMRSYSWPD-KLCYHGIMSSDLKGFPTVRFHFRGGAKLALEKDSM 351 (411)
Q Consensus 273 ~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~g~~~~~~~~~~-~~C~~~~~~~~~~~~P~i~~~f~~g~~~~l~~~~y 351 (411)
+..+||||||++++||++++++|.+++.+. . ..... .+|+.. ..+|+|+|+|+ |++++|++++|
T Consensus 208 -~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~-~------~~g~~~~~C~~~------~~~P~i~f~f~-g~~~~i~~~~y 272 (324)
T 1am5_A 208 -GCQAIVDTGTSKIVAPVSALANIMKDIGAS-E------NQGEMMGNCASV------QSLPDITFTIN-GVKQPLPPSAY 272 (324)
T ss_dssp -CEEEEECTTCSSEEECTTTHHHHHHHHTCE-E------CCCCEECCTTSS------SSSCCEEEEET-TEEEEECHHHH
T ss_pred -CceEEEecCCccEECCHHHHHHHHHHhCCc-c------cCCcEEEeCCCc------ccCCcEEEEEC-CEEEEECHHHh
Confidence 268999999999999999999999998432 1 11112 789843 37899999997 89999999999
Q ss_pred EEEcCCCeEEEE-EEeCCCCCCcccceeeehhhcceeEEEEECCCCEEEEecCC
Q 038667 352 FYQPRPDAFCMA-VNPASINNRYVNFSLIGMMAQQFYNVGYDIGRKQKTFQRMD 404 (411)
Q Consensus 352 ~~~~~~~~~C~~-~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~~riGfa~~~ 404 (411)
+++. +..|+. +..........+.||||+.|||++|+|||++++|||||+++
T Consensus 273 ~~~~--~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 273 IEGD--QAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp EEES--SSCEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred cccC--CCeEEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 9986 668984 55432111112359999999999999999999999999974
No 16
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=1.9e-54 Score=419.58 Aligned_cols=291 Identities=22% Similarity=0.321 Sum_probs=241.2
Q ss_pred CCceEEEEEEeCCCCceEEEEEeCCCCceeEe-----CCCCCCCCCCCCCCCCCCCCCcccccCCCCCcCCCCCCCCCCC
Q 038667 57 SNSLFYVNISIGQPPVPQFTAMDTGSSLLWVH-----CYPCRDCSPQLGTIFYPSRSSSYAYVPCDSEHCRYFPYARCSA 131 (411)
Q Consensus 57 ~~~~Y~~~i~iGtP~q~~~~i~DTGSs~~wv~-----~~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~C~~ 131 (411)
.++.|+++|.||||||++.|+|||||+++||+ |..|..|. .++.|||++|+||+.
T Consensus 10 ~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~--~~~~y~~~~SsT~~~------------------ 69 (339)
T 3fv3_A 10 EGPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCK--SSGTFTPSSSSSYKN------------------ 69 (339)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTT--TTCCBCGGGCTTCEE------------------
T ss_pred CCCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCC--CCCcCCCccCcceee------------------
Confidence 46799999999999999999999999999998 66666784 578999999999999
Q ss_pred CCCcceeeEeeCCCCeeeeeEEEEEEEeeCCCCCceeeecEEEEeEeeeccCCCcceEEecCCCCCc-------------
Q 038667 132 YKHRCIYTQLYLIGPETSVFVSTEQLTFKNTDESTIHVQDVVFGCGFSTNRNFKFSGIFGLGIGRSS------------- 198 (411)
Q Consensus 132 ~~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~GilGLg~~~~S------------- 198 (411)
..|.|.+.|++|+.+.|.+++|+|+|++ ++++++.|||++... ..+||||||++..+
T Consensus 70 --~~~~~~i~Yg~gs~~~G~~~~D~v~~g~-----~~v~~~~fg~~~~~~---~~~GilGLg~~~~~~~~~~~~~~~~~~ 139 (339)
T 3fv3_A 70 --LGAAFTIRYGDGSTSQGTWGKDTVTING-----VSITGQQIADVTQTS---VDQGILGIGYTSNEAVYDTSGRQTTPN 139 (339)
T ss_dssp --EEEEEEEECTTSCEEEEEEEEEEEEETT-----EEEEEEEEEEEEEES---SSSCEEECSCGGGCCCBCTTSCBCSCC
T ss_pred --CCceEEEEECCCceEEEEEEEEEEEECC-----EEECceEEEEEEecC---CCceeEEecCccccccccccccccCcc
Confidence 6789999999998899999999999998 899999999999875 36999999997643
Q ss_pred ---hHHhh-------cCceEEecCCCCCCCCCCcceecCCCCCC-CCC--cccccccCCCceEEEeeEEEECCeEEecCC
Q 038667 199 ---LVSQL-------NSSFSYCIGSLHDPDYLHNKLILGDGAII-DEG--DATPLQFIDGHYYITLEAISVDGRMLDINP 265 (411)
Q Consensus 199 ---~~~ql-------~~~FS~~l~~~~~~~~~~g~l~fGg~~~~-~~~--~~~pl~~~~~~y~v~l~~i~v~g~~~~~~~ 265 (411)
|+.|| .++||+||.+... ..|.|+|||.+.. +.+ .|+|+ ....+|.|.+++|.|+++.+...
T Consensus 140 ~~~~~~~L~~~g~i~~~~fsl~l~~~~~---~~G~l~fGg~d~~~~~g~l~~~p~-~~~~~~~v~l~~i~v~g~~~~~~- 214 (339)
T 3fv3_A 140 YDNVPVTLKKQGKIRTNAYSLYLNSPSA---ETGTIIFGGVDNAKYSGKLVAEQV-TSSQALTISLASVNLKGSSFSFG- 214 (339)
T ss_dssp CCCHHHHHHHTTSCSSSEEEEECCCTTC---SEEEEEETEEETTSBSSCCEEEEB-CCSSSCEEEEEEEEESSCEEEEE-
T ss_pred CCcHHHHHHHCCCCCCceEEEEECCCCC---CCeEEEEeeechHHeecceEEEec-ccCccEEEEEEEEEECCEeecCC-
Confidence 66776 4799999987432 3589999995532 344 58898 44569999999999999987643
Q ss_pred CcccccCCCCcEEEecccccccccHHHHHHHHHHHHHHhhcCCCcCCCCCC-CCccccccCCCccCCCeEEEEEcCCcEE
Q 038667 266 NIFKRDDSGGGVMIDSGTDVTWLVKEAYEALRDEVMIRLEGEQMRSYSWPD-KLCYHGIMSSDLKGFPTVRFHFRGGAKL 344 (411)
Q Consensus 266 ~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~g~~~~~~~~~~-~~C~~~~~~~~~~~~P~i~~~f~~g~~~ 344 (411)
..+||||||++++||++++++|++++.+.+.. ........ .+|+. ..+|+|+|+|++|+++
T Consensus 215 ---------~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~--~~~~~~~~~~~C~~-------~~~p~i~f~f~~g~~~ 276 (339)
T 3fv3_A 215 ---------DGALLDSGTTLTYFPSDFAAQLADKAGARLVQ--VARDQYLYFIDCNT-------DTSGTTVFNFGNGAKI 276 (339)
T ss_dssp ---------EEEEECTTBSSEEECHHHHHHHHHHHTCEEEE--EETTEEEEEECTTC-------CCCSEEEEEETTSCEE
T ss_pred ---------ccEEEeCCCCCEecCHHHHHHHHHHcCCEEcc--ccccCceEEEecCC-------CCCCcEEEEECCCCEE
Confidence 67999999999999999999999999643320 00011111 79984 2689999999768999
Q ss_pred EEcCCceEEEcCCCeEEE-EEEeCCCCCCcccceeeehhhcceeEEEEECCCCEEEEecCCCCCc
Q 038667 345 ALEKDSMFYQPRPDAFCM-AVNPASINNRYVNFSLIGMMAQQFYNVGYDIGRKQKTFQRMDCEVL 408 (411)
Q Consensus 345 ~l~~~~y~~~~~~~~~C~-~~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~~riGfa~~~c~~~ 408 (411)
+|++++|+++... ..|+ ++.. .+ .||||+.|||++|+|||++++|||||+++|.+.
T Consensus 277 ~v~~~~~~~~~~~-~~C~~~i~~-~~------~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~~ 333 (339)
T 3fv3_A 277 TVPNTEYVYQNGD-GTCLWGIQP-SD------DTILGDNFLRHAYLLYNLDANTISIAQVKYTTD 333 (339)
T ss_dssp EEEGGGGEEECSS-SCEEESEEE-CS------SCEECHHHHTTEEEEEETTTTEEEEEEBCCCSC
T ss_pred EECHHHheeeCCC-CeEEEEEEe-CC------cEEeChHHHhCEEEEEECCCCEEEEEecCCCCc
Confidence 9999999998643 4684 5555 21 399999999999999999999999999999853
No 17
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=9.2e-55 Score=419.93 Aligned_cols=297 Identities=23% Similarity=0.377 Sum_probs=241.5
Q ss_pred CCCceEEEEEEeCCCCceEEEEEeCCCCceeEeCCCCCC--CCCCCCCCCCCCCCCcccccCCCCCcCCCCCCCCCCCCC
Q 038667 56 ISNSLFYVNISIGQPPVPQFTAMDTGSSLLWVHCYPCRD--CSPQLGTIFYPSRSSSYAYVPCDSEHCRYFPYARCSAYK 133 (411)
Q Consensus 56 ~~~~~Y~~~i~iGtP~q~~~~i~DTGSs~~wv~~~~C~~--C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~C~~~~ 133 (411)
..+..|+++|.||||+|++.|+|||||+++||+|..|.. | ..++.|||++|+|++.
T Consensus 9 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C--~~~~~y~~~~SsT~~~-------------------- 66 (329)
T 1htr_B 9 YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQAC--TSHSRFNPSESSTYST-------------------- 66 (329)
T ss_dssp GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHH--HTSCCBCGGGCTTCEE--------------------
T ss_pred EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCccc--CCCCcCCCccCCCeEE--------------------
Confidence 578899999999999999999999999999999999986 8 4578999999999998
Q ss_pred CcceeeEeeCCCCeeeeeEEEEEEEeeCCCCCceeeecEEEEeEeeec---c-CCCcceEEecCCCCCc------hHHhh
Q 038667 134 HRCIYTQLYLIGPETSVFVSTEQLTFKNTDESTIHVQDVVFGCGFSTN---R-NFKFSGIFGLGIGRSS------LVSQL 203 (411)
Q Consensus 134 ~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~---~-~~~~~GilGLg~~~~S------~~~ql 203 (411)
..|.|.+.|++|+. .|.+++|+|+|++ ++++++.|||++... + ...++||||||++..+ ++.||
T Consensus 67 ~~~~~~i~Yg~gs~-~G~~~~D~v~~g~-----~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l 140 (329)
T 1htr_B 67 NGQTFSLQYGSGSL-TGFFGYDTLTVQS-----IQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGM 140 (329)
T ss_dssp EEEEEEEEETTEEE-EEEEEEEEEEETT-----EEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCSHHHHH
T ss_pred CCcEEEEEeCCCCe-EEEEEeeeEEEcc-----eEECceEEEEEEEccccccccCCCceEEecCCCcccccCCCCHHHHH
Confidence 68899999999984 9999999999987 899999999998764 3 3468999999998765 44444
Q ss_pred -------cCceEEecCCCCCCCCCCcceecCCCCCC-CCC--cccccccCCCceEEEeeEEEECCeEEecCCCcccccCC
Q 038667 204 -------NSSFSYCIGSLHDPDYLHNKLILGDGAII-DEG--DATPLQFIDGHYYITLEAISVDGRMLDINPNIFKRDDS 273 (411)
Q Consensus 204 -------~~~FS~~l~~~~~~~~~~g~l~fGg~~~~-~~~--~~~pl~~~~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~ 273 (411)
.++||+||.+.... ..|.|+|||.+.. +.+ .|+|+ ....+|.|.|++|+|+++.+... ..
T Consensus 141 ~~qg~i~~~~Fs~~L~~~~~~--~~G~l~fGg~d~~~~~g~l~~~p~-~~~~~~~v~l~~i~v~~~~~~~~-------~~ 210 (329)
T 1htr_B 141 VQEGALTSPVFSVYLSNQQGS--SGGAVVFGGVDSSLYTGQIYWAPV-TQELYWQIGIEEFLIGGQASGWC-------SE 210 (329)
T ss_dssp HHTTCSSSSEEEEEECSSCSS--EEEEEEESSCCGGGEEEEEEEEEB-CSSSSCEEEECEEEETTEECCTT-------TT
T ss_pred HhcCCCCCCEEEEEEcCCCCC--CCcEEEEcccCHHHcCCceEEEEC-CCCceEEEEEeEEEECCceeeec-------CC
Confidence 68999999986421 2589999996643 233 58998 45689999999999999875411 12
Q ss_pred CCcEEEecccccccccHHHHHHHHHHHHHHhhcCCCcCCCCCCCCccccccCCCccCCCeEEEEEcCCcEEEEcCCceEE
Q 038667 274 GGGVMIDSGTDVTWLVKEAYEALRDEVMIRLEGEQMRSYSWPDKLCYHGIMSSDLKGFPTVRFHFRGGAKLALEKDSMFY 353 (411)
Q Consensus 274 ~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~g~~~~~~~~~~~~C~~~~~~~~~~~~P~i~~~f~~g~~~~l~~~~y~~ 353 (411)
...+||||||++++||++++++|++++.+... .......+|+.. ..+|+|+|+|+ |++++|++++|++
T Consensus 211 ~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~~-----~~g~~~~~C~~~------~~~P~i~f~f~-g~~~~i~~~~y~~ 278 (329)
T 1htr_B 211 GCQAIVDTGTSLLTVPQQYMSALLQATGAQED-----EYGQFLVNCNSI------QNLPSLTFIIN-GVEFPLPPSSYIL 278 (329)
T ss_dssp CEEEEECTTCCSEEEEGGGHHHHHHHHTCEEC-----TTSCEEECGGGG------GGSCCEEEEET-TEEEEECHHHHEE
T ss_pred CceEEEecCCccEECCHHHHHHHHHHhCCeec-----CCCeEEEeCCCc------ccCCcEEEEEC-CEEEEECHHHhcc
Confidence 57899999999999999999999999853221 111112789953 37899999997 8999999999999
Q ss_pred EcCCCeEEEE-EEeCCCCCCccc-ceeeehhhcceeEEEEECCCCEEEEecCC
Q 038667 354 QPRPDAFCMA-VNPASINNRYVN-FSLIGMMAQQFYNVGYDIGRKQKTFQRMD 404 (411)
Q Consensus 354 ~~~~~~~C~~-~~~~~~~~~~~~-~~IlG~~fl~~~yvvfD~~~~riGfa~~~ 404 (411)
+.. + .|+. +.........++ .||||+.|||++|+|||++++|||||+++
T Consensus 279 ~~~-g-~C~~~~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 279 SNN-G-YCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp ECS-S-CEEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred cCC-C-EEEEEEEECCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 876 3 8985 554321111123 59999999999999999999999999874
No 18
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=9.4e-55 Score=422.21 Aligned_cols=290 Identities=20% Similarity=0.279 Sum_probs=239.6
Q ss_pred CCCceEEEEEEeCCCCceEEEEEeCCCCceeEeCCC--CC---------CCCCCCCCCCCCCCCCcccccCCCCCcCCCC
Q 038667 56 ISNSLFYVNISIGQPPVPQFTAMDTGSSLLWVHCYP--CR---------DCSPQLGTIFYPSRSSSYAYVPCDSEHCRYF 124 (411)
Q Consensus 56 ~~~~~Y~~~i~iGtP~q~~~~i~DTGSs~~wv~~~~--C~---------~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~ 124 (411)
..++.|+++|.||||||++.|+|||||+++||+|.. |. .| ..++.|||++|+|++.
T Consensus 9 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C--~~~~~y~~~~SsT~~~----------- 75 (342)
T 3pvk_A 9 NEQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFC--KQKGTYDPSGSSASQD----------- 75 (342)
T ss_dssp ECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGG--GTTCCBCGGGCTTCEE-----------
T ss_pred cCCcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCC--CCCCcCCCccCcceee-----------
Confidence 357899999999999999999999999999998654 63 36 3578999999999999
Q ss_pred CCCCCCCCCCcceeeEeeCCCCeeeeeEEEEEEEeeCCCCCceeeecEEEEeEeeeccCCCcceEEecCCCC-------C
Q 038667 125 PYARCSAYKHRCIYTQLYLIGPETSVFVSTEQLTFKNTDESTIHVQDVVFGCGFSTNRNFKFSGIFGLGIGR-------S 197 (411)
Q Consensus 125 ~~~~C~~~~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~GilGLg~~~-------~ 197 (411)
..|.|.+.|++|+.+.|.+++|+|+|++ ++++++.|||++... ..+||||||++. .
T Consensus 76 ---------~~~~~~i~Yg~gs~~~G~~~~D~v~ig~-----~~v~~~~fg~~~~~~---~~~GilGLg~~~~~~~~~~~ 138 (342)
T 3pvk_A 76 ---------LNTPFKIGYGDGSSSQGTLYKDTVGFGG-----VSIKNQVLADVDSTS---IDQGILGVGYKTNEAGGSYD 138 (342)
T ss_dssp ---------EEEEEEEECSSSCEEEEEEEEEEEEETT-----EEEEEEEEEEEEEES---SSSCEEECSCGGGCSSCSSC
T ss_pred ---------cCCeEEEEecCCCeEEEEEEEEEEEECC-----EEecceEEEEEEccC---CCccEEEecCccccccccCC
Confidence 6789999999999889999999999998 899999999998765 579999999986 3
Q ss_pred chHHhh-------cCceEEecCCCCCCCCCCcceecCCCCCC-CCC--cccccccCCCceEEEeeEEEECCeEEecCCCc
Q 038667 198 SLVSQL-------NSSFSYCIGSLHDPDYLHNKLILGDGAII-DEG--DATPLQFIDGHYYITLEAISVDGRMLDINPNI 267 (411)
Q Consensus 198 S~~~ql-------~~~FS~~l~~~~~~~~~~g~l~fGg~~~~-~~~--~~~pl~~~~~~y~v~l~~i~v~g~~~~~~~~~ 267 (411)
+++.|| .++||+||.+.. ...|.|+|||.+.. +.+ .|+|+. ...+|.|.+++|.|+++.+..+
T Consensus 139 ~~~~~L~~qg~i~~~~fs~~l~~~~---~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g~~~~~~--- 211 (342)
T 3pvk_A 139 NVPVTLKKQGVIAKNAYSLYLNSPD---AATGQIIFGGVDNAKYSGSLIALPVT-SDRELRISLGSVEVSGKTINTD--- 211 (342)
T ss_dssp CHHHHHHHTTSSSSSEEEEECCCTT---CSEEEEEETEEETTSBSSCCEEEECC-CSSSCEEEEEEEEETTEEEEEE---
T ss_pred cHHHHHHhcCCCCCceEEEEeCCCC---CCCcEEEECccCccceeeeeEEeecC-ccceEEEEEeEEEECCEEecCC---
Confidence 577776 578999998743 23489999996532 344 589994 4569999999999999988754
Q ss_pred ccccCCCCcEEEecccccccccHHHHHHHHHHHHHHhhcCCCcCCCC---CCCCccccccCCCccCCCeEEEEEcCCcEE
Q 038667 268 FKRDDSGGGVMIDSGTDVTWLVKEAYEALRDEVMIRLEGEQMRSYSW---PDKLCYHGIMSSDLKGFPTVRFHFRGGAKL 344 (411)
Q Consensus 268 ~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~g~~~~~~~~---~~~~C~~~~~~~~~~~~P~i~~~f~~g~~~ 344 (411)
+..+||||||++++||++++++|++++.+... ..... ...+|+ .+|+|+|+|++|+++
T Consensus 212 ------~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~----~~~~~~~~~~~~C~---------~~p~i~f~f~~g~~~ 272 (342)
T 3pvk_A 212 ------NVDVLLDSGTTITYLQQDLADQIIKAFNGKLT----QDSNGNSFYEVDCN---------LSGDVVFNFSKNAKI 272 (342)
T ss_dssp ------EEEEEECTTCSSEEECHHHHHHHHHHTTCEEE----ECTTSCEEEEECSC---------CCSEEEEEESTTCEE
T ss_pred ------CceEEEeCCCCCeecCHHHHHHHHHHcCCeec----ccCCCceEEEEecC---------CCCceEEEECCCCEE
Confidence 46899999999999999999999999965432 11111 127898 459999999878999
Q ss_pred EEcCCceEEEcC--CC---eEEEEEEeCCCCCCcccceeeehhhcceeEEEEECCCCEEEEecCCCCC
Q 038667 345 ALEKDSMFYQPR--PD---AFCMAVNPASINNRYVNFSLIGMMAQQFYNVGYDIGRKQKTFQRMDCEV 407 (411)
Q Consensus 345 ~l~~~~y~~~~~--~~---~~C~~~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~~riGfa~~~c~~ 407 (411)
+||+++|+++.. .+ ..|+..+...+ .||||+.|||++|+|||++++|||||+++|..
T Consensus 273 ~vp~~~~~~~~~~~~g~~~~~C~~~i~~~~------~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~ 334 (342)
T 3pvk_A 273 SVPASEFAASLQGDDGQPYDKCQLLFDVND------ANILGDNFLRSAYIVYDLDDNEISLAQVKYTS 334 (342)
T ss_dssp EEEGGGGEEC----------CEEESEEECT------TCEECHHHHTTEEEEEETTTTEEEEEEBCCCS
T ss_pred EEcHHHheeeccccCCCcCCeeEEEEeeCC------CeEeCHHHHhcEEEEEECCCCEEEEEecCCCC
Confidence 999999998741 22 67976555432 39999999999999999999999999999985
No 19
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=2e-54 Score=419.71 Aligned_cols=299 Identities=22% Similarity=0.347 Sum_probs=243.2
Q ss_pred cCCCceEEEEEEeCCCCceEEEEEeCCCCceeEeCCCCC----CCCCCCCCCCCCCCCCcccccCCCCCcCCCCCCCCCC
Q 038667 55 DISNSLFYVNISIGQPPVPQFTAMDTGSSLLWVHCYPCR----DCSPQLGTIFYPSRSSSYAYVPCDSEHCRYFPYARCS 130 (411)
Q Consensus 55 ~~~~~~Y~~~i~iGtP~q~~~~i~DTGSs~~wv~~~~C~----~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~C~ 130 (411)
++.+..|+++|.||||||++.|+|||||+++||+|..|. .| ..++.|||++|+|++.
T Consensus 14 n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C--~~~~~y~~~~SsT~~~----------------- 74 (341)
T 3k1w_A 14 NYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTAC--VYHKLFDASDSSSYKH----------------- 74 (341)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHH--HTSCCBCGGGCTTCEE-----------------
T ss_pred EccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcc--cCCCCCCCCcCcCeeE-----------------
Confidence 456899999999999999999999999999999999998 48 4678999999999998
Q ss_pred CCCCcceeeEeeCCCCeeeeeEEEEEEEeeCCCCCceeeecEEEEeEeeec---c-CCCcceEEecCCCCCc------hH
Q 038667 131 AYKHRCIYTQLYLIGPETSVFVSTEQLTFKNTDESTIHVQDVVFGCGFSTN---R-NFKFSGIFGLGIGRSS------LV 200 (411)
Q Consensus 131 ~~~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~---~-~~~~~GilGLg~~~~S------~~ 200 (411)
..|.|.+.|++|+ +.|.+++|+|+|++ +++ ++.|||++... + ...++||||||++..+ ++
T Consensus 75 ---~~~~~~i~Yg~gs-~~G~~~~D~v~ig~-----~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~ 144 (341)
T 3k1w_A 75 ---NGTELTLRYSTGT-VSGFLSQDIITVGG-----ITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIF 144 (341)
T ss_dssp ---EEEEEEEEETTEE-EEEEEEEEEEEETT-----EEE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHH
T ss_pred ---CCCEEEEEECCcE-EEEEEEEEEEEECC-----cee-eEEEEEEEEccccccccCCcceEEECCchhhcccCCCCHH
Confidence 7899999999998 79999999999998 888 99999999875 2 3458999999998765 44
Q ss_pred Hhh-------cCceEEecCCCCCCC-CCCcceecCCCCCC-CCC--cccccccCCCceEEEeeEEEECCeEEecCCCccc
Q 038667 201 SQL-------NSSFSYCIGSLHDPD-YLHNKLILGDGAII-DEG--DATPLQFIDGHYYITLEAISVDGRMLDINPNIFK 269 (411)
Q Consensus 201 ~ql-------~~~FS~~l~~~~~~~-~~~g~l~fGg~~~~-~~~--~~~pl~~~~~~y~v~l~~i~v~g~~~~~~~~~~~ 269 (411)
.+| .++||+||.+..... ...|.|+|||.+.. +.+ .|+|+ ....+|.|.+++|+|+++.+...
T Consensus 145 ~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~-~~~~~w~v~l~~i~v~~~~~~~~----- 218 (341)
T 3k1w_A 145 DNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINL-IKTGVWQIQMKGVSVGSSTLLCE----- 218 (341)
T ss_dssp HHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEEC-SSTTSCEEEECCEEETTEEEECT-----
T ss_pred HHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEec-CCCCEEEEEEeEEEECCEEeecC-----
Confidence 444 689999999864211 23589999996643 333 48898 46789999999999999975433
Q ss_pred ccCCCCcEEEecccccccccHHHHHHHHHHHHHHhhcCCCcCCCCCCCCccccccCCCccCCCeEEEEEcCCcEEEEcCC
Q 038667 270 RDDSGGGVMIDSGTDVTWLVKEAYEALRDEVMIRLEGEQMRSYSWPDKLCYHGIMSSDLKGFPTVRFHFRGGAKLALEKD 349 (411)
Q Consensus 270 ~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~g~~~~~~~~~~~~C~~~~~~~~~~~~P~i~~~f~~g~~~~l~~~ 349 (411)
....+||||||++++||.+++++|++++.+... . .....+|... ..+|+|+|+|+ |++++|+++
T Consensus 219 ---~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~-----~-~g~~~~C~~~------~~~p~i~f~f~-g~~~~l~~~ 282 (341)
T 3k1w_A 219 ---DGCLALVDTGASYISGSTSSIEKLMEALGAKKR-----L-FDYVVKCNEG------PTLPDISFHLG-GKEYTLTSA 282 (341)
T ss_dssp ---TCEEEEECTTCSSEEECHHHHHHHHHHHTCEEC-----S-SCEEEEGGGG------GGCCCEEEEET-TEEEEECHH
T ss_pred ---CCCEEEEECCCChhcCCHHHHHHHHHHcCCeec-----C-CCeEEeCCCC------CcCCcEEEEEC-CEEEEECHH
Confidence 246899999999999999999999999953321 1 1222789843 37899999998 999999999
Q ss_pred ceEEEcC--CCeEEEE-EEeCCCCCCcccceeeehhhcceeEEEEECCCCEEEEecCC
Q 038667 350 SMFYQPR--PDAFCMA-VNPASINNRYVNFSLIGMMAQQFYNVGYDIGRKQKTFQRMD 404 (411)
Q Consensus 350 ~y~~~~~--~~~~C~~-~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~~riGfa~~~ 404 (411)
+|+++.. ++..|+. +..........+.||||+.|||++|+|||++++|||||+++
T Consensus 283 ~~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 283 DYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp HHBCCSCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred HheeEccCCCCCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 9998863 3678985 54432111112359999999999999999999999999975
No 20
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=4.1e-54 Score=421.75 Aligned_cols=293 Identities=23% Similarity=0.327 Sum_probs=242.0
Q ss_pred cccccCCCceEEEEEEeCCCCceEEEEEeCCCCceeEeCCCCC--CCCCCCCCCCCCCCCCcccccCCCCCcCCCCCCCC
Q 038667 51 LPSNDISNSLFYVNISIGQPPVPQFTAMDTGSSLLWVHCYPCR--DCSPQLGTIFYPSRSSSYAYVPCDSEHCRYFPYAR 128 (411)
Q Consensus 51 ~~~~~~~~~~Y~~~i~iGtP~q~~~~i~DTGSs~~wv~~~~C~--~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~ 128 (411)
.|+.+..+..|+++|.||||||++.|+|||||+++||+|..|. .| ..++.|||++|+||+.
T Consensus 54 ~pl~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C--~~~~~y~~~~SsT~~~--------------- 116 (375)
T 1miq_A 54 IELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGC--SIKNLYDSSKSKSYEK--------------- 116 (375)
T ss_dssp CCGGGTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGG--GGSCCBCGGGCTTCEE---------------
T ss_pred EEcccCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCCcccc--cCCCcCCCccCCceEE---------------
Confidence 3444557889999999999999999999999999999999997 48 4678999999999998
Q ss_pred CCCCCCcceeeEeeCCCCeeeeeEEEEEEEeeCCCCCceeeecEEEEeEee----ec-c-CCCcceEEecCCCCCc----
Q 038667 129 CSAYKHRCIYTQLYLIGPETSVFVSTEQLTFKNTDESTIHVQDVVFGCGFS----TN-R-NFKFSGIFGLGIGRSS---- 198 (411)
Q Consensus 129 C~~~~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~----~~-~-~~~~~GilGLg~~~~S---- 198 (411)
..|.|.+.|++|+ +.|.+++|+|+|++ +++++ .|||++. .. | ...++||||||++..+
T Consensus 117 -----~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~-----~~v~~-~Fg~~~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~ 184 (375)
T 1miq_A 117 -----DGTKVDITYGSGT-VKGFFSKDLVTLGH-----LSMPY-KFIEVTDTDDLEPIYSSVEFDGILGLGWKDLSIGSI 184 (375)
T ss_dssp -----EEEEEEEEETTEE-EEEEEEEEEEEETT-----EEEEE-EEEEEEECGGGTTHHHHSCCCEEEECSSCCTTCSSC
T ss_pred -----CCcEEEEEeCCCe-EEEEEEEEEEEEcC-----ceECc-EEEEEEeccccccccccCCCceEEeCCCCcccccCC
Confidence 6889999999998 79999999999997 89999 9999998 43 3 3458999999998765
Q ss_pred --hHHhh-------cCceEEecCCCCCCCCCCcceecCCCCCC-CCC--cccccccCCCceEEEeeEEEECCeEEecCCC
Q 038667 199 --LVSQL-------NSSFSYCIGSLHDPDYLHNKLILGDGAII-DEG--DATPLQFIDGHYYITLEAISVDGRMLDINPN 266 (411)
Q Consensus 199 --~~~ql-------~~~FS~~l~~~~~~~~~~g~l~fGg~~~~-~~~--~~~pl~~~~~~y~v~l~~i~v~g~~~~~~~~ 266 (411)
++.+| .++||+||.+... ..|.|+|||.+.. +.+ .|+|+ ....+|.|.++ |+|+++.+ .
T Consensus 185 ~~~~~~l~~qg~i~~~~FS~~L~~~~~---~~G~l~fGg~d~~~~~g~l~~~p~-~~~~~w~v~l~-i~v~g~~~--~-- 255 (375)
T 1miq_A 185 DPIVVELKNQNKIDNALFTFYLPVHDV---HAGYLTIGGIEEKFYEGNITYEKL-NHDLYWQIDLD-VHFGKQTM--E-- 255 (375)
T ss_dssp CCHHHHHHHTTSSSSSEEEEECCTTCT---TEEEEEESSCCGGGEEEEEEEEEB-SSSSSSEEEEE-EEETTEEE--E--
T ss_pred CCHHHHHHhccCcCCCEEEEEecCCCC---CCeEEEEcccCHHHcCCceEEEec-CCCceEEEEEE-EEECCEEc--c--
Confidence 34443 6899999998531 3589999997633 333 58999 45689999999 99999886 1
Q ss_pred cccccCCCCcEEEecccccccccHHHHHHHHHHHHHHhhcCCCcCCCCCC-CCccccccCCCccCCCeEEEEEcCCcEEE
Q 038667 267 IFKRDDSGGGVMIDSGTDVTWLVKEAYEALRDEVMIRLEGEQMRSYSWPD-KLCYHGIMSSDLKGFPTVRFHFRGGAKLA 345 (411)
Q Consensus 267 ~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~g~~~~~~~~~~-~~C~~~~~~~~~~~~P~i~~~f~~g~~~~ 345 (411)
+..+||||||++++||.+++++|++++.+.+ ....... .+|+. ..+|+|+|+|+ |++++
T Consensus 256 -------~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~-----~~~~g~~~~~C~~-------~~~P~i~f~f~-g~~~~ 315 (375)
T 1miq_A 256 -------KANVIVDSGTTTITAPSEFLNKFFANLNVIK-----VPFLPFYVTTCDN-------KEMPTLEFKSA-NNTYT 315 (375)
T ss_dssp -------EEEEEECTTBSSEEECHHHHHHHHHHHTCEE-----CTTSSCEEEETTC-------TTCCCEEEECS-SCEEE
T ss_pred -------cceEEecCCCccEEcCHHHHHHHHHHhCCcc-----cCCCCeEEEECCC-------CCCCcEEEEEC-CEEEE
Confidence 4789999999999999999999999995422 1111112 78984 27899999997 89999
Q ss_pred EcCCceEEEcC--CCeEEE-EEEeCCCCCCcccceeeehhhcceeEEEEECCCCEEEEecCC
Q 038667 346 LEKDSMFYQPR--PDAFCM-AVNPASINNRYVNFSLIGMMAQQFYNVGYDIGRKQKTFQRMD 404 (411)
Q Consensus 346 l~~~~y~~~~~--~~~~C~-~~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~~riGfa~~~ 404 (411)
|++++|+++.. +...|+ ++....... +.||||++|||++|+|||++++|||||+++
T Consensus 316 l~~~~yi~~~~~~g~~~C~~~~~~~~~~~---~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 316 LEPEYYMNPILEVDDTLCMITMLPVDIDS---NTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp ECGGGSEEESSSSSCSEEEESEEECCSSS---SEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred ECHHHhEeeccCCCCCeEEEEEEECCCCC---CcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 99999999874 356897 566543211 259999999999999999999999999864
No 21
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=3.9e-54 Score=414.73 Aligned_cols=291 Identities=15% Similarity=0.141 Sum_probs=237.8
Q ss_pred CCCceEEEEEEeCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCCcCCCCCCCCCCCCCCc
Q 038667 56 ISNSLFYVNISIGQPPVPQFTAMDTGSSLLWVHCYPCRDCSPQLGTIFYPSRSSSYAYVPCDSEHCRYFPYARCSAYKHR 135 (411)
Q Consensus 56 ~~~~~Y~~~i~iGtP~q~~~~i~DTGSs~~wv~~~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~C~~~~~~ 135 (411)
..+..|+++|.|| +|++.|+|||||+++||+|..|..|..+.++.|||++|+ ++. ..
T Consensus 11 ~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~--------------------~~ 67 (325)
T 1ibq_A 11 NNDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELPSSEQTGHDLYTPSSSA-TKL--------------------SG 67 (325)
T ss_dssp TTTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSCHHHHTTSCCCBCCSSC-EEC--------------------TT
T ss_pred CCCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCCccccCCCCCCCchhcC-Ccc--------------------CC
Confidence 4688999999999 899999999999999999999998655778999999999 654 67
Q ss_pred ceeeEeeCCCCeeeeeEEEEEEEeeCCCCCceeeecEEEEeEeeec--c-C-CCcceEEecCCCCCc---------hHHh
Q 038667 136 CIYTQLYLIGPETSVFVSTEQLTFKNTDESTIHVQDVVFGCGFSTN--R-N-FKFSGIFGLGIGRSS---------LVSQ 202 (411)
Q Consensus 136 ~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~--~-~-~~~~GilGLg~~~~S---------~~~q 202 (411)
|.|.+.|++|+.+.|.+++|+|+|++ ++++++.|||++... + . ..++||||||++..+ +++|
T Consensus 68 ~~~~i~Yg~Gs~~~G~~~~D~v~ig~-----~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~ 142 (325)
T 1ibq_A 68 YSWDISYGDGSSASGDVYRDTVTVGG-----VTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDT 142 (325)
T ss_dssp CBEEEECSSSCEEEEEEEEEEEEETT-----EEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHH
T ss_pred CEEEEEeCCCCEEEEEEEEeEEEECC-----EEEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHHH
Confidence 89999999999889999999999997 899999999999865 2 2 468999999997654 3455
Q ss_pred h-----cCceEEecCCCCCCCCCCcceecCCCCCC-CC--CcccccccCCCceEEEeeEEEECCeEEecCCCcccccCCC
Q 038667 203 L-----NSSFSYCIGSLHDPDYLHNKLILGDGAII-DE--GDATPLQFIDGHYYITLEAISVDGRMLDINPNIFKRDDSG 274 (411)
Q Consensus 203 l-----~~~FS~~l~~~~~~~~~~g~l~fGg~~~~-~~--~~~~pl~~~~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~ 274 (411)
| .++||+||.+. ..|.|+|||.+.. +. ..|+|+.....+|.|.|++|+|+++.+.. ..
T Consensus 143 l~~~i~~~~FS~~l~~~-----~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~~~---------~~ 208 (325)
T 1ibq_A 143 VKSQLDSPLFAVQLKHD-----APGVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSSSS---------SG 208 (325)
T ss_dssp HGGGSSSSEEEEEEETT-----EEEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCCBS---------CC
T ss_pred HHHhcCCcEEEEEecCC-----CCceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeeccC---------CC
Confidence 4 68999999862 2489999996632 34 35999965678999999999999986531 25
Q ss_pred CcEEEecccccccccHHHHHHHHHHHHHHhhcCCCcCCCCCC-CCccccccCCCccCCCeEEEEEcCCcEEEEcCCceEE
Q 038667 275 GGVMIDSGTDVTWLVKEAYEALRDEVMIRLEGEQMRSYSWPD-KLCYHGIMSSDLKGFPTVRFHFRGGAKLALEKDSMFY 353 (411)
Q Consensus 275 ~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~g~~~~~~~~~~-~~C~~~~~~~~~~~~P~i~~~f~~g~~~~l~~~~y~~ 353 (411)
..+||||||++++||++++++|++++.++.. ....... .+|+ ..+|+|+|+|+ |++++||+++|++
T Consensus 209 ~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~~----~~~~g~~~~~C~--------~~~P~i~f~fg-g~~~~i~~~~~~~ 275 (325)
T 1ibq_A 209 FSAIADTGTTLILLDDEIVSAYYEQVSGAQE----SYEAGGYVFSCS--------TDLPDFTVVIG-DYKAVVPGKYINY 275 (325)
T ss_dssp EEEEECTTCCSEEECHHHHHHHHTTSTTCBC----CSSSSSCEEETT--------CCCCCEEEEET-TEEEEECHHHHEE
T ss_pred ceEEEeCCCCcEeCCHHHHHHHHHhCCCceE----cCcCCeEEEEcC--------CCCCcEEEEEC-CEEEEECHHHhcc
Confidence 7899999999999999999999998842211 1111112 6898 36899999997 9999999999998
Q ss_pred Ec-C-CCeEEEEEEeCCCCCCcccceeeehhhcceeEEEEECCCCEEEEecCC
Q 038667 354 QP-R-PDAFCMAVNPASINNRYVNFSLIGMMAQQFYNVGYDIGRKQKTFQRMD 404 (411)
Q Consensus 354 ~~-~-~~~~C~~~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~~riGfa~~~ 404 (411)
.. . +...|++.+...+.. +.||||+.|||++|+|||++++|||||+++
T Consensus 276 ~~~~~~~~~C~~~i~~~~~~---~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 276 APVSTGSSTCYGGIQSNSGL---GLSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp EESSTTCSEEEESEEECTTT---CSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred cccCCCCCeEEEEEEcCCCC---CceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 75 3 347898744332221 249999999999999999999999999864
No 22
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=2.6e-54 Score=415.51 Aligned_cols=289 Identities=14% Similarity=0.130 Sum_probs=236.8
Q ss_pred CCCceEEEEEEeCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCCcCCCCCCCCCCCCCCc
Q 038667 56 ISNSLFYVNISIGQPPVPQFTAMDTGSSLLWVHCYPCRDCSPQLGTIFYPSRSSSYAYVPCDSEHCRYFPYARCSAYKHR 135 (411)
Q Consensus 56 ~~~~~Y~~~i~iGtP~q~~~~i~DTGSs~~wv~~~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~C~~~~~~ 135 (411)
..+..|+++|.|| ||++.|+|||||+++||+|..|..|..+.++.|||++|+ ++. ..
T Consensus 12 ~~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~--------------------~~ 68 (323)
T 1izd_A 12 SNDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTPSSERSGHDYYTPGSSA-QKI--------------------DG 68 (323)
T ss_dssp GGGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHTTCCCBCCCTTC-EEE--------------------EE
T ss_pred CCCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCCcccccCCCCCCccccC-Ccc--------------------CC
Confidence 4678999999999 899999999999999999999998654678999999999 654 67
Q ss_pred ceeeEeeCCCCeeeeeEEEEEEEeeCCCCCceeeecEEEEeEeeec--c--CCCcceEEecCCCCCc---------hHHh
Q 038667 136 CIYTQLYLIGPETSVFVSTEQLTFKNTDESTIHVQDVVFGCGFSTN--R--NFKFSGIFGLGIGRSS---------LVSQ 202 (411)
Q Consensus 136 ~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~--~--~~~~~GilGLg~~~~S---------~~~q 202 (411)
|.|.+.|++|+.+.|.+++|+|+|++ ++++++.|||++... + ...++||||||++..+ +++|
T Consensus 69 ~~~~i~Yg~Gs~~~G~~~~D~v~ig~-----~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~ 143 (323)
T 1izd_A 69 ATWSISYGDGSSASGDVYKDKVTVGG-----VSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDN 143 (323)
T ss_dssp EEEEEECTTSCEEEEEEEEEEEEETT-----EEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHH
T ss_pred CeEEEEcCCCCeEEEEEEEEEEEECC-----EEECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHHH
Confidence 89999999999889999999999997 899999999999865 2 2468999999997654 3444
Q ss_pred h-----cCceEEecCCCCCCCCCCcceecCCCCCC-CCC--cccccccCCCceEEEeeEEEECCeEEecCCCcccccCCC
Q 038667 203 L-----NSSFSYCIGSLHDPDYLHNKLILGDGAII-DEG--DATPLQFIDGHYYITLEAISVDGRMLDINPNIFKRDDSG 274 (411)
Q Consensus 203 l-----~~~FS~~l~~~~~~~~~~g~l~fGg~~~~-~~~--~~~pl~~~~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~ 274 (411)
| .++||+||.+. ..|.|+|||.+.. +.+ .|+|+.....+|.|.+++|+|++ .+.. ..
T Consensus 144 l~~~i~~~~FS~~L~~~-----~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~~~---------~~ 208 (323)
T 1izd_A 144 VKSSLSEPIFAVALKHN-----APGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DSSS---------DS 208 (323)
T ss_dssp HGGGSSSSEEEEECCTT-----SCEEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETT-EEEC---------CC
T ss_pred HHHhccCcEEEEEccCC-----CCCEEEECCcCccccccceEEEECCCCCceEEEEECeEEECC-cccC---------CC
Confidence 3 68999999863 2489999996643 333 58999656789999999999999 5431 25
Q ss_pred CcEEEecccccccccHHHHHHHHHHHHHHhhcCCCcCCCCCC-CCccccccCCCccCCCeEEEEEcCCcEEEEcCCceEE
Q 038667 275 GGVMIDSGTDVTWLVKEAYEALRDEVMIRLEGEQMRSYSWPD-KLCYHGIMSSDLKGFPTVRFHFRGGAKLALEKDSMFY 353 (411)
Q Consensus 275 ~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~g~~~~~~~~~~-~~C~~~~~~~~~~~~P~i~~~f~~g~~~~l~~~~y~~ 353 (411)
..+||||||++++||++++++|.+++..+.. ....... .+|+ ..+|+|+|+|+ |++++|++++|++
T Consensus 209 ~~aiiDSGTs~~~lp~~~~~~i~~~i~ga~~----~~~~g~~~~~C~--------~~~P~i~f~fg-g~~~~i~~~~~~~ 275 (323)
T 1izd_A 209 ITGIADTGTTLLLLDDSIVDAYYEQVNGASY----DSSQGGYVFPSS--------ASLPDFSVTIG-DYTATVPGEYISF 275 (323)
T ss_dssp EEEEECTTCCSEEECHHHHHHHHTTSTTCEE----ETTTTEEEEETT--------CCCCCEEEEET-TEEEEECHHHHEE
T ss_pred ceEEEeCCCcceeCCHHHHHHHHHhCCCcEE----cCcCCEEEEECC--------CCCceEEEEEC-CEEEecCHHHeEE
Confidence 7899999999999999999999998842211 1111111 6898 36899999996 9999999999998
Q ss_pred EcCCCeEEEE-EEeCCCCCCcccceeeehhhcceeEEEEECCCCEEEEecCC
Q 038667 354 QPRPDAFCMA-VNPASINNRYVNFSLIGMMAQQFYNVGYDIGRKQKTFQRMD 404 (411)
Q Consensus 354 ~~~~~~~C~~-~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~~riGfa~~~ 404 (411)
...++..|++ +...... +.||||+.|||++|+|||++++|||||+++
T Consensus 276 ~~~~~~~C~~~i~~~~~~----~~~IlG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 276 ADVGNGQTFGGIQSNSGI----GFSIFGDVFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp EECSTTEEEESEEECTTT----SSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ecCCCCeEEEEEEcCCCC----CcEEEChHHhcCEEEEEECCCCEEEEeeCC
Confidence 8656678987 5443221 249999999999999999999999999864
No 23
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=2.7e-53 Score=427.13 Aligned_cols=310 Identities=21% Similarity=0.312 Sum_probs=240.6
Q ss_pred cccccCCCceEEEEEEeCCCCceEEEEEeCCCCceeEeCCCCC---CCCCCCCCCCCCCCCCcccccCCCCCcCCCCCCC
Q 038667 51 LPSNDISNSLFYVNISIGQPPVPQFTAMDTGSSLLWVHCYPCR---DCSPQLGTIFYPSRSSSYAYVPCDSEHCRYFPYA 127 (411)
Q Consensus 51 ~~~~~~~~~~Y~~~i~iGtP~q~~~~i~DTGSs~~wv~~~~C~---~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~ 127 (411)
.++.++.+..|+++|.||||||++.|+|||||+++||+|..|. .|. .++.|||++|+||+.
T Consensus 44 ~~l~n~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C~--~~~~y~~~~SsT~~~-------------- 107 (478)
T 1qdm_A 44 VALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACY--LHSRYKAGASSTYKK-------------- 107 (478)
T ss_dssp GGGCCGGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGGG--GSCCBCGGGCTTCBC--------------
T ss_pred EEeEeccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCCCcccc--CCCCCCcccCCCeee--------------
Confidence 3443456889999999999999999999999999999999996 484 568999999999998
Q ss_pred CCCCCCCcceeeEeeCCCCeeeeeEEEEEEEeeCCCCCceeeecEEEEeEeeec---c-CCCcceEEecCCCCCch----
Q 038667 128 RCSAYKHRCIYTQLYLIGPETSVFVSTEQLTFKNTDESTIHVQDVVFGCGFSTN---R-NFKFSGIFGLGIGRSSL---- 199 (411)
Q Consensus 128 ~C~~~~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~---~-~~~~~GilGLg~~~~S~---- 199 (411)
.+|.|.+.|++|+ +.|.+++|+|+|++ ++++++.|||++... | ...++||||||++..|+
T Consensus 108 ------~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~-----~~v~~~~Fg~a~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~ 175 (478)
T 1qdm_A 108 ------NGKPAAIQYGTGS-IAGYFSEDSVTVGD-----LVVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGKAV 175 (478)
T ss_dssp ------CCCEEEEEETTEE-EEEEEEEEEEEETT-----EEEEEEEEEEEEECCBSHHHHCSSSEEEECSCGGGCGGGCC
T ss_pred ------CCcEEEEEcCCCC-eEEEEEEEEEEECC-----eEECCEEEEEEEecCCcccccccccceecccccccccCCCC
Confidence 6789999999998 79999999999997 899999999998754 2 34589999999987763
Q ss_pred --HHhh-------cCceEEecCCCCCCCCCCcceecCCCCCC-CCC--cccccccCCCceEEEeeEEEECCeEEecCCCc
Q 038667 200 --VSQL-------NSSFSYCIGSLHDPDYLHNKLILGDGAII-DEG--DATPLQFIDGHYYITLEAISVDGRMLDINPNI 267 (411)
Q Consensus 200 --~~ql-------~~~FS~~l~~~~~~~~~~g~l~fGg~~~~-~~~--~~~pl~~~~~~y~v~l~~i~v~g~~~~~~~~~ 267 (411)
+.+| .++||+||.+..+ ....|.|+|||.+.. +.+ .|+|+ ....+|.|.+++|+|+++.+.+..
T Consensus 176 p~~~~l~~qg~i~~~~FS~~L~~~~~-~~~~G~l~fGg~d~~~~~G~l~~~pv-~~~~~w~v~l~~i~v~g~~~~~~~-- 251 (478)
T 1qdm_A 176 PVWYKMIEQGLVSDPVFSFWLNRHVD-EGEGGEIIFGGMDPKHYVGEHTYVPV-TQKGYWQFDMGDVLVGGKSTGFCA-- 251 (478)
T ss_dssp CHHHHHTTTTCCSSSEEEEECCCC------CEEEEETCCCTTSEEEEEEEEEE-EEETTEEEEECCEEETTEECSTTT--
T ss_pred cHHHHHHHCCCCCCCEEEEEeecCCC-CCCCeEEEeCCcCHhhcCCCceEEec-cCCCeEEEEEeEEEECCEEEeecC--
Confidence 2233 5899999987532 223589999996643 333 58998 456799999999999998875431
Q ss_pred ccccCCCCcEEEecccccccccHHHHHHHHHHHHHHh----------------------hcC------------------
Q 038667 268 FKRDDSGGGVMIDSGTDVTWLVKEAYEALRDEVMIRL----------------------EGE------------------ 307 (411)
Q Consensus 268 ~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~----------------------~g~------------------ 307 (411)
.+..+||||||++++||.+++++|.++|.+.. ...
T Consensus 252 -----~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~~~~~~ 326 (478)
T 1qdm_A 252 -----GGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTR 326 (478)
T ss_dssp -----TCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC------
T ss_pred -----CCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhccccccccCccc
Confidence 25789999999999999999999999884310 000
Q ss_pred ----------------------------------------------------------CCcCCCCCC-CCccccccCCCc
Q 038667 308 ----------------------------------------------------------QMRSYSWPD-KLCYHGIMSSDL 328 (411)
Q Consensus 308 ----------------------------------------------------------~~~~~~~~~-~~C~~~~~~~~~ 328 (411)
.++...... ++|...
T Consensus 327 ~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~C~~~------ 400 (478)
T 1qdm_A 327 GVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSL------ 400 (478)
T ss_dssp ---------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEECGGGG------
T ss_pred cccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEeecccc------
Confidence 000000001 444422
Q ss_pred cCCCeEEEEEcCCcEEEEcCCceEEEcCC--CeEEEE-EEeCCCCCCcccceeeehhhcceeEEEEECCCCEEEEecCC
Q 038667 329 KGFPTVRFHFRGGAKLALEKDSMFYQPRP--DAFCMA-VNPASINNRYVNFSLIGMMAQQFYNVGYDIGRKQKTFQRMD 404 (411)
Q Consensus 329 ~~~P~i~~~f~~g~~~~l~~~~y~~~~~~--~~~C~~-~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~~riGfa~~~ 404 (411)
..+|+|+|+|+ |++|+|+|++|++.... ...|++ +.........++.||||+.|||++|+|||++++|||||++.
T Consensus 401 ~~lP~i~f~~g-g~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~a~ 478 (478)
T 1qdm_A 401 GSMPDIEFTIG-GKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKAA 478 (478)
T ss_dssp TTCCCEEEEET-TEEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred cccccEEEEEC-CEEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEEEEeCC
Confidence 37999999998 89999999999998754 458987 44332111123469999999999999999999999999863
No 24
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=5.4e-53 Score=415.96 Aligned_cols=313 Identities=22% Similarity=0.299 Sum_probs=241.0
Q ss_pred CCCceEEEEEEeCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCCcCCCCCCCCCCCCCCc
Q 038667 56 ISNSLFYVNISIGQPPVPQFTAMDTGSSLLWVHCYPCRDCSPQLGTIFYPSRSSSYAYVPCDSEHCRYFPYARCSAYKHR 135 (411)
Q Consensus 56 ~~~~~Y~~~i~iGtP~q~~~~i~DTGSs~~wv~~~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~C~~~~~~ 135 (411)
..+..|+++|.||||+|++.|+|||||+++||+|.+|..| ++.|||++|+||+. ..
T Consensus 10 ~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~~----~~~f~~~~SsT~~~--------------------~~ 65 (383)
T 2ewy_A 10 DSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYI----DTYFDTERSSTYRS--------------------KG 65 (383)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBTTB----SCCCCGGGCTTCEE--------------------EE
T ss_pred CCCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCCcc----ccCcccccCcccee--------------------CC
Confidence 4567899999999999999999999999999999999776 57899999999998 67
Q ss_pred ceeeEeeCCCCeeeeeEEEEEEEeeCCCCCceee-ecEEEEeEeeec--c--CCCcceEEecCCCCCc------------
Q 038667 136 CIYTQLYLIGPETSVFVSTEQLTFKNTDESTIHV-QDVVFGCGFSTN--R--NFKFSGIFGLGIGRSS------------ 198 (411)
Q Consensus 136 ~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~-~~~~fg~~~~~~--~--~~~~~GilGLg~~~~S------------ 198 (411)
|.|.+.|++|+ +.|.+++|+|+|++. ... ..+.|++..... + ...++||||||++..+
T Consensus 66 ~~~~i~Yg~Gs-~~G~~~~Dtv~i~~~----~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~ 140 (383)
T 2ewy_A 66 FDVTVKYTQGS-WTGFVGEDLVTIPKG----FNTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDS 140 (383)
T ss_dssp EEEEEECSSCE-EEEEEEEEEEEETTT----EEEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHH
T ss_pred ceEEEEECCcE-EEEEEEEEEEEECCC----ccceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCHHHH
Confidence 89999999998 599999999999862 122 236788876554 3 2458999999997653
Q ss_pred hHHhh--cCceEEecCCCC----CCCCCCcceecCCCCC-CCCC--cccccccCCCceEEEeeEEEECCeEEecCCCccc
Q 038667 199 LVSQL--NSSFSYCIGSLH----DPDYLHNKLILGDGAI-IDEG--DATPLQFIDGHYYITLEAISVDGRMLDINPNIFK 269 (411)
Q Consensus 199 ~~~ql--~~~FS~~l~~~~----~~~~~~g~l~fGg~~~-~~~~--~~~pl~~~~~~y~v~l~~i~v~g~~~~~~~~~~~ 269 (411)
+++|. .++||+||.+.. ......|.|+|||.+. .+.+ .|+|+. ...+|.|.|++|+|+++.+.++...+.
T Consensus 141 l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g~~~~~~~~~~~ 219 (383)
T 2ewy_A 141 LVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIK-EEWYYQIEILKLEIGGQSLNLDCREYN 219 (383)
T ss_dssp HHHHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECS-SBTTBBCCEEEEEETTEECCCCTTTTT
T ss_pred HHHccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecC-CCceEEEEEEEEEECCEEccccccccC
Confidence 34443 589999997521 1122359999999663 3344 589994 457999999999999999876544431
Q ss_pred ccCCCCcEEEecccccccccHHHHHHHHHHHHHHhhcCCCcCCC-----CCCCCccccccCCCccCCCeEEEEEcCC---
Q 038667 270 RDDSGGGVMIDSGTDVTWLVKEAYEALRDEVMIRLEGEQMRSYS-----WPDKLCYHGIMSSDLKGFPTVRFHFRGG--- 341 (411)
Q Consensus 270 ~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~g~~~~~~~-----~~~~~C~~~~~~~~~~~~P~i~~~f~~g--- 341 (411)
...+||||||++++||++++++|++++.+... ..... ....+|+... ......+|+|+|+|+++
T Consensus 220 ----~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~---~~~~~~~~~~~~~~~C~~~~-~~~~~~~P~i~f~f~g~~~~ 291 (383)
T 2ewy_A 220 ----ADKAIVDSGTTLLRLPQKVFDAVVEAVARASL---IPEFSDGFWTGSQLACWTNS-ETPWSYFPKISIYLRDENSS 291 (383)
T ss_dssp ----SSCEEECTTCSSEEEEHHHHHHHHHHHHHTTC---SSCCCHHHHHTSEEEEECSS-SCGGGGSCCEEEEEECSSTT
T ss_pred ----CccEEEEcCCccccCCHHHHHHHHHHHhhhcc---cccCccccccccccccccCC-cccHhhCCcEEEEECCCCCC
Confidence 36899999999999999999999999987653 11111 1127898542 11124699999999953
Q ss_pred --cEEEEcCCceEEEcC---CCeEEEEEEeCCCCCCcccceeeehhhcceeEEEEECCCCEEEEecCCCCCccC
Q 038667 342 --AKLALEKDSMFYQPR---PDAFCMAVNPASINNRYVNFSLIGMMAQQFYNVGYDIGRKQKTFQRMDCEVLDD 410 (411)
Q Consensus 342 --~~~~l~~~~y~~~~~---~~~~C~~~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~~riGfa~~~c~~~~~ 410 (411)
.+++|++++|+++.. .+..|+++...... +.||||+.|||++|+|||++++|||||+++|.+..+
T Consensus 292 ~~~~~~l~~~~yi~~~~~~~~~~~C~~~~i~~~~----~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~ 361 (383)
T 2ewy_A 292 RSFRITILPQLYIQPMMGAGLNYECYRFGISPST----NALVIGATVMEGFYVIFDRAQKRVGFAASPCAEIAG 361 (383)
T ss_dssp EEEEEEECHHHHEEEECCCTTCSEEEEESEEEES----SCEEECHHHHTTEEEEEETTTTEEEEEECTTCBSSS
T ss_pred ceEEEEEChHHheeecccCCCCceeEEEEecCCC----CcEEEChHHhCCeeEEEECCCCeEEEEeccCCCcCC
Confidence 379999999998863 35689864211111 139999999999999999999999999999987543
No 25
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=4.9e-54 Score=413.70 Aligned_cols=289 Identities=16% Similarity=0.183 Sum_probs=235.4
Q ss_pred CCCceEEEEEEeCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCCcCCCCCCCCCCCCCCc
Q 038667 56 ISNSLFYVNISIGQPPVPQFTAMDTGSSLLWVHCYPCRDCSPQLGTIFYPSRSSSYAYVPCDSEHCRYFPYARCSAYKHR 135 (411)
Q Consensus 56 ~~~~~Y~~~i~iGtP~q~~~~i~DTGSs~~wv~~~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~C~~~~~~ 135 (411)
..+..|+++|.|| ||++.|+|||||+++||+|..|..|..+.++.|||++|+ ++. ..
T Consensus 12 ~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~--------------------~~ 68 (323)
T 1bxo_A 12 ANDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQQSGHSVYNPSATG-KEL--------------------SG 68 (323)
T ss_dssp GGGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHTTSCCBCHHHHC-EEE--------------------EE
T ss_pred CCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCchhccCCCCCCcccCC-ccc--------------------CC
Confidence 4688999999999 899999999999999999999998655778999999999 665 67
Q ss_pred ceeeEeeCCCCeeeeeEEEEEEEeeCCCCCceeeecEEEEeEeeec--c-C-CCcceEEecCCCCCc---------hHHh
Q 038667 136 CIYTQLYLIGPETSVFVSTEQLTFKNTDESTIHVQDVVFGCGFSTN--R-N-FKFSGIFGLGIGRSS---------LVSQ 202 (411)
Q Consensus 136 ~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~--~-~-~~~~GilGLg~~~~S---------~~~q 202 (411)
|.|.+.|++|+.+.|.+++|+|+|++ ++++++.|||++... + . ..++||||||++..+ +++|
T Consensus 69 ~~~~i~Yg~Gs~~~G~~~~D~v~ig~-----~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~ 143 (323)
T 1bxo_A 69 YTWSISYGDGSSASGNVFTDSVTVGG-----VTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDT 143 (323)
T ss_dssp EEEEEECTTSCEEEEEEEEEEEEETT-----EEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHH
T ss_pred CeEEEEeCCCCeEEEEEEEEEEEECC-----EEECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHHH
Confidence 99999999999889999999999997 899999999999865 2 2 468999999997544 3444
Q ss_pred h-----cCceEEecCCCCCCCCCCcceecCCCCCC-CCC--cccccccCCCceEEEeeEEEECCeEEecCCCcccccCCC
Q 038667 203 L-----NSSFSYCIGSLHDPDYLHNKLILGDGAII-DEG--DATPLQFIDGHYYITLEAISVDGRMLDINPNIFKRDDSG 274 (411)
Q Consensus 203 l-----~~~FS~~l~~~~~~~~~~g~l~fGg~~~~-~~~--~~~pl~~~~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~ 274 (411)
| .++||+||.+. ..|.|+|||.+.. +.+ .|+|+.....+|.|.|++|+|++ +.. ..
T Consensus 144 l~~~i~~~~FS~~L~~~-----~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~--~~~---------~~ 207 (323)
T 1bxo_A 144 VKSSLAQPLFAVALKHQ-----QPGVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGS--QSG---------DG 207 (323)
T ss_dssp HGGGBSSSEEEEECCSS-----SCEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETT--EEE---------EE
T ss_pred HHHhcCCcEEEEEEeCC-----CCceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECC--ccC---------CC
Confidence 4 68999999862 2489999996632 344 59999656789999999999999 221 14
Q ss_pred CcEEEecccccccccHHHHHHHHHHHHHHhhcCCCcCCCCCC-CCccccccCCCccCCCeEEEEEcCCcEEEEcCCceEE
Q 038667 275 GGVMIDSGTDVTWLVKEAYEALRDEVMIRLEGEQMRSYSWPD-KLCYHGIMSSDLKGFPTVRFHFRGGAKLALEKDSMFY 353 (411)
Q Consensus 275 ~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~g~~~~~~~~~~-~~C~~~~~~~~~~~~P~i~~~f~~g~~~~l~~~~y~~ 353 (411)
..+||||||++++||++++++|++++..+.. ....... .+|+ ..+|+|+|+|+ |++++|++++|++
T Consensus 208 ~~aiiDSGTs~~~lP~~~~~~l~~~i~~a~~----~~~~g~~~~~C~--------~~~P~i~f~fg-g~~~~l~~~~~~~ 274 (323)
T 1bxo_A 208 FSGIADTGTTLLLLDDSVVSQYYSQVSGAQQ----DSNAGGYVFDCS--------TNLPDFSVSIS-GYTATVPGSLINY 274 (323)
T ss_dssp EEEEECTTCSSEEECHHHHHHHHTTSTTCEE----ETTTTEEEECTT--------CCCCCEEEEET-TEEEEECHHHHEE
T ss_pred ceEEEeCCCCceeCCHHHHHHHHHhCCCceE----cCcCCEEEEECC--------CCCceEEEEEC-CEEEEECHHHeEE
Confidence 6899999999999999999999998842211 1111111 7898 36899999997 9999999999998
Q ss_pred EcC-CCeEEEEEEeCCCCCCcccceeeehhhcceeEEEEECCCCEEEEecCC
Q 038667 354 QPR-PDAFCMAVNPASINNRYVNFSLIGMMAQQFYNVGYDIGRKQKTFQRMD 404 (411)
Q Consensus 354 ~~~-~~~~C~~~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~~riGfa~~~ 404 (411)
... ++..|+..+...+.. +.||||+.|||++|+|||++++|||||+++
T Consensus 275 ~~~~~~~~C~~~i~~~~~~---~~~ILG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 275 GPSGDGSTCLGGIQSNSGI---GFSIFGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp EECSSSSCEEESEEECTTC---SSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred eccCCCCeEEEEEECCCCC---CcEEEChHHHcCEEEEEECCCCEEEEecCC
Confidence 763 347898744332221 249999999999999999999999999864
No 26
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=7.6e-53 Score=416.40 Aligned_cols=316 Identities=19% Similarity=0.256 Sum_probs=241.3
Q ss_pred CCCceEEEEEEeCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCCcCCCCCCCCCCCCCCc
Q 038667 56 ISNSLFYVNISIGQPPVPQFTAMDTGSSLLWVHCYPCRDCSPQLGTIFYPSRSSSYAYVPCDSEHCRYFPYARCSAYKHR 135 (411)
Q Consensus 56 ~~~~~Y~~~i~iGtP~q~~~~i~DTGSs~~wv~~~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~C~~~~~~ 135 (411)
..+..|+++|.||||+|++.|+|||||+++||+|..|..| ++.|||++|+||+. ..
T Consensus 18 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~~----~~~y~~~~SsT~~~--------------------~~ 73 (395)
T 2qp8_A 18 KSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFL----HRYYQRQLSSTYRD--------------------LR 73 (395)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTC----SCCCCGGGCTTCEE--------------------EE
T ss_pred CCCceEEEEEEecCCCceEEEEEecCCCceEEECCCCccc----cCCcCcccCCCcee--------------------CC
Confidence 3567899999999999999999999999999999998665 58899999999998 67
Q ss_pred ceeeEeeCCCCeeeeeEEEEEEEeeCCCCCceeee-cEEEEeEeeec--c--CCCcceEEecCCCCCc--------hHHh
Q 038667 136 CIYTQLYLIGPETSVFVSTEQLTFKNTDESTIHVQ-DVVFGCGFSTN--R--NFKFSGIFGLGIGRSS--------LVSQ 202 (411)
Q Consensus 136 ~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~-~~~fg~~~~~~--~--~~~~~GilGLg~~~~S--------~~~q 202 (411)
|.|.+.|++|+ +.|.+++|+|+|++. ..+. .+.|++..... | ...++||||||++..+ ++.+
T Consensus 74 ~~~~i~Yg~Gs-~~G~~~~Dtv~ig~g----~~~~~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~ 148 (395)
T 2qp8_A 74 KGVYVPYTQGK-WEGELGTDLVSIPHG----PNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDS 148 (395)
T ss_dssp EEEEEECSSCE-EEEEEEEEEEECTTS----CSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHH
T ss_pred ceEEEEECCcE-EEEEEEeEEEEECCC----CCceEEEEEEEEEccCcccccccCccceEEcCchhhccCCCCCCCHHHH
Confidence 89999999998 499999999999831 2222 36678776544 3 2468999999997653 3334
Q ss_pred h------cCceEEecCCCCCC-------CCCCcceecCCCCCC-CCC--cccccccCCCceEEEeeEEEECCeEEecCCC
Q 038667 203 L------NSSFSYCIGSLHDP-------DYLHNKLILGDGAII-DEG--DATPLQFIDGHYYITLEAISVDGRMLDINPN 266 (411)
Q Consensus 203 l------~~~FS~~l~~~~~~-------~~~~g~l~fGg~~~~-~~~--~~~pl~~~~~~y~v~l~~i~v~g~~~~~~~~ 266 (411)
| .++||+||.+...+ ....|.|+|||.+.. +.+ .|+|+. ...+|.|.|++|+|+++.+.++..
T Consensus 149 l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g~~~~~~~~ 227 (395)
T 2qp8_A 149 LVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIR-REWYYEVIIVRVEINGQDLKMDCK 227 (395)
T ss_dssp HHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECC-SBTTBBCCEEEEEETTEECCCCGG
T ss_pred HHHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccC-CCceEEEEEEEEEECCEEcccCcc
Confidence 3 57999999763110 123589999996632 333 489994 467999999999999998876544
Q ss_pred cccccCCCCcEEEecccccccccHHHHHHHHHHHHHHhhcCCCcCC--CCCCCCccccccCCCccCCCeEEEEEcCCc--
Q 038667 267 IFKRDDSGGGVMIDSGTDVTWLVKEAYEALRDEVMIRLEGEQMRSY--SWPDKLCYHGIMSSDLKGFPTVRFHFRGGA-- 342 (411)
Q Consensus 267 ~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~g~~~~~~--~~~~~~C~~~~~~~~~~~~P~i~~~f~~g~-- 342 (411)
.+. ...+||||||++++||++++++|++++.+.......... .....+|+... ......+|+|+|+|+++.
T Consensus 228 ~~~----~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~-~~~~~~~P~i~f~f~g~~~~ 302 (395)
T 2qp8_A 228 EYN----YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAG-TTPWNIFPVISLYLMGEVTN 302 (395)
T ss_dssp GGG----SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTT-CCCGGGSCCEEEEEECSSTT
T ss_pred ccC----CceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccCCccccccccccccccc-cchHhhCCcEEEEEccCCCC
Confidence 431 368999999999999999999999999887531000000 11127898543 112346999999999543
Q ss_pred ---EEEEcCCceEEEcCC----CeEEEEEEeCCCCCCcccceeeehhhcceeEEEEECCCCEEEEecCCCCCccC
Q 038667 343 ---KLALEKDSMFYQPRP----DAFCMAVNPASINNRYVNFSLIGMMAQQFYNVGYDIGRKQKTFQRMDCEVLDD 410 (411)
Q Consensus 343 ---~~~l~~~~y~~~~~~----~~~C~~~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~~riGfa~~~c~~~~~ 410 (411)
+++|+|++|+++... ...|+++...... +.||||+.|||++|+|||++++|||||+++|.++++
T Consensus 303 ~~~~~~l~p~~yi~~~~~~~~~~~~C~~~~i~~~~----~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~ 373 (395)
T 2qp8_A 303 QSFRITILPQQYLRPVEDVATSQDDCYKFAISQSS----TGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDE 373 (395)
T ss_dssp EEEEEEECHHHHEEEECCTTCCSCEEEEECEEEES----SCEEECHHHHTTEEEEEETTTTEEEEEEETTCCCCS
T ss_pred ceEEEEECHHHhEeecccCCCCCceEEEEEecCCC----CcEEEChHHhCCeeEEEECCCCEEEEEeccCCCCCC
Confidence 799999999988642 3589743221111 149999999999999999999999999999998654
No 27
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=2.8e-53 Score=409.44 Aligned_cols=295 Identities=15% Similarity=0.208 Sum_probs=240.8
Q ss_pred cccCCCceEEEEEEeCCCCceEEEEEeCCCCceeEeCCCCC--CCCCCCCCCCCCCCCCcccccCCCCCcCCCCCCCCCC
Q 038667 53 SNDISNSLFYVNISIGQPPVPQFTAMDTGSSLLWVHCYPCR--DCSPQLGTIFYPSRSSSYAYVPCDSEHCRYFPYARCS 130 (411)
Q Consensus 53 ~~~~~~~~Y~~~i~iGtP~q~~~~i~DTGSs~~wv~~~~C~--~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~C~ 130 (411)
+.++.+..|+++|.|| +|++.|+|||||+++||+|..|. .|....++.|||++| ||+.
T Consensus 11 l~n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~~~y~~~~S-T~~~----------------- 70 (330)
T 1yg9_A 11 VHVFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECVGGACVCPNLQKYEKLKP-KYIS----------------- 70 (330)
T ss_dssp EEEEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCCSGGGGSTTCCCCCCSSC-EEEE-----------------
T ss_pred eecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCCccCcccccCccCCCCC-ceEE-----------------
Confidence 3345678999999999 89999999999999999999998 495456789999999 9998
Q ss_pred CCCCcceeeEeeCCCCeeeeeEEEEEEEeeCCCCCceeeecEEEEeEeeec--c-CCCcceEEecCCCCCc-------hH
Q 038667 131 AYKHRCIYTQLYLIGPETSVFVSTEQLTFKNTDESTIHVQDVVFGCGFSTN--R-NFKFSGIFGLGIGRSS-------LV 200 (411)
Q Consensus 131 ~~~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~--~-~~~~~GilGLg~~~~S-------~~ 200 (411)
..+.|.+.|++|+. .|.+++|+|+|++ ++++++.|||++... | ...++||||||++..+ ++
T Consensus 71 ---~~~~~~i~Yg~Gs~-~G~~~~Dtv~ig~-----~~~~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~ 141 (330)
T 1yg9_A 71 ---DGNVQVKFFDTGSA-VGRGIEDSLTISQ-----LTTSQQDIVLADELSQEVCILSADVVVGIAAPGCPNALKGKTVL 141 (330)
T ss_dssp ---EEEEEEEETTTEEE-EEEEEEEEEEETT-----EEEEEEEEEEEEEECTHHHHTTCSEEEECSCTTSCCTTSCCCHH
T ss_pred ---CCCEEEEEECCceE-EEEEEEEEEEECC-----EEEcCeEEEEEEEcccccccccCceEEEcCcchhccccCCCCHH
Confidence 67899999999985 9999999999997 899999999999864 2 2458999999998776 55
Q ss_pred Hhh------cCceEEecCCCCCCCCCCcceecCCCCCC-CCC--cccccccCCCceEEEeeEEEECCeEEecCCCccccc
Q 038667 201 SQL------NSSFSYCIGSLHDPDYLHNKLILGDGAII-DEG--DATPLQFIDGHYYITLEAISVDGRMLDINPNIFKRD 271 (411)
Q Consensus 201 ~ql------~~~FS~~l~~~~~~~~~~g~l~fGg~~~~-~~~--~~~pl~~~~~~y~v~l~~i~v~g~~~~~~~~~~~~~ 271 (411)
+|| .++||+||.+..+ ....|.|+|||.+.. +.+ .|+|+. ...+|.|.|++|+|+++.+..
T Consensus 142 ~~l~~qg~i~~~FS~~l~~~~~-~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~~~~-------- 211 (330)
T 1yg9_A 142 ENFVEENLIAPVFSIHHARFQD-GEHFGEIIFGGSDWKYVDGEFTYVPLV-GDDSWKFRLDGVKIGDTTVAP-------- 211 (330)
T ss_dssp HHHHHTTSSCSEEEEEEEECTT-SCEEEEEEETSCCGGGEEEEEEEEEBS-CTTSCCEECSEEEETTEEEEC--------
T ss_pred HHHHhcCCCCceEEEEEcCCCC-CCCCCEEEECCcCHHHccCceEEEECC-CCCEEEEEeCeEEECCEEEcC--------
Confidence 555 5899999987532 112589999996633 333 589994 678999999999999988651
Q ss_pred CCCCcEEEecccccccccHHHHHHHHHHHHHHhhcCCCcCCC-CC-CCCccccccCCCccCCCeEEEEEcCCcEEEEcCC
Q 038667 272 DSGGGVMIDSGTDVTWLVKEAYEALRDEVMIRLEGEQMRSYS-WP-DKLCYHGIMSSDLKGFPTVRFHFRGGAKLALEKD 349 (411)
Q Consensus 272 ~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~g~~~~~~~-~~-~~~C~~~~~~~~~~~~P~i~~~f~~g~~~~l~~~ 349 (411)
.+..+||||||++++||++++++|++++.+... .... .. ..+|+.. ..+|+|+|+|+ |++++|+++
T Consensus 212 -~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~----~~g~~~~~~~~C~~~------~~~p~i~f~fg-g~~~~l~~~ 279 (330)
T 1yg9_A 212 -AGTQAIIDTSKAIIVGPKAYVNPINEAIGCVVE----KTTTRRICKLDCSKI------PSLPDVTFVIN-GRNFNISSQ 279 (330)
T ss_dssp -TTCEEEECTTCSSEEEEHHHHHHHHHHHTCEEE----ECSSCEEEEECGGGG------GGSCCEEEEET-TEEEEECHH
T ss_pred -CCcEEEEecCCccccCCHHHHHHHHHHhCCccc----CCCceEEEEEECCCc------cccCcEEEEEC-CEEEEECHH
Confidence 257899999999999999999999999954321 1110 12 3679843 37899999997 999999999
Q ss_pred ceEEEcCCCeEEEE-EEeCCCCCCcccceeeehhhcceeEEEEECCCCEEEEecCC
Q 038667 350 SMFYQPRPDAFCMA-VNPASINNRYVNFSLIGMMAQQFYNVGYDIGRKQKTFQRMD 404 (411)
Q Consensus 350 ~y~~~~~~~~~C~~-~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~~riGfa~~~ 404 (411)
+|+++. +..|+. +...... +.||||+.|||++|+|||++++|||||+++
T Consensus 280 ~y~~~~--~~~C~~~i~~~~~~----~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 280 YYIQQN--GNLCYSGFQPCGHS----DHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp HHEEEE--TTEEEESEEEETTC----SSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred HhcccC--CCcEEEEEEeCCCC----CeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 999986 568985 4443211 249999999999999999999999999874
No 28
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=2.9e-53 Score=423.23 Aligned_cols=294 Identities=18% Similarity=0.213 Sum_probs=240.2
Q ss_pred cccccCCCceEEEEEEeCCCCceEEEEEeCCCCceeEeCCCCC--CCCCCCCCCCCCCCCCcccccCCCCCcCCCCCCCC
Q 038667 51 LPSNDISNSLFYVNISIGQPPVPQFTAMDTGSSLLWVHCYPCR--DCSPQLGTIFYPSRSSSYAYVPCDSEHCRYFPYAR 128 (411)
Q Consensus 51 ~~~~~~~~~~Y~~~i~iGtP~q~~~~i~DTGSs~~wv~~~~C~--~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~ 128 (411)
.|+.+..+..|+++|.||||||++.|++||||+++||+|..|. .| ..++.|||++|+|++.
T Consensus 129 ~pL~n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C--~~~~~ydps~SsT~~~--------------- 191 (451)
T 3qvc_A 129 VELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESC--ESKNHYDSSKSKTYEK--------------- 191 (451)
T ss_dssp CCGGGGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGG--TTSCCBCGGGCTTCEE---------------
T ss_pred cceeecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCcccc--CCCCCCCCCCCccccc---------------
Confidence 3444567889999999999999999999999999999999996 49 5678999999999998
Q ss_pred CCCCCCcceeeEeeCCCCeeeeeEEEEEEEeeCCCCCceeeecEEEEeEee----ec-c-CCCcceEEecCCCCCc----
Q 038667 129 CSAYKHRCIYTQLYLIGPETSVFVSTEQLTFKNTDESTIHVQDVVFGCGFS----TN-R-NFKFSGIFGLGIGRSS---- 198 (411)
Q Consensus 129 C~~~~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~----~~-~-~~~~~GilGLg~~~~S---- 198 (411)
..|.|.+.|++|+ +.|.+++|+|+|++ ++++ +.|||++. .. + ...++||||||++..+
T Consensus 192 -----~~~~f~i~YgdGs-~~G~~~~Dtv~igg-----~~v~-~~Fg~a~~t~~~~~~f~~~~~dGILGLg~~~~s~~~~ 259 (451)
T 3qvc_A 192 -----DDTPVKLTSKAGT-ISGIFSKDLVTIGK-----LSVP-YKFIEMTEIVGFEPFYSESDVDGVFGLGWKDLSIGSI 259 (451)
T ss_dssp -----EEEEEEEECSSEE-EEEEEEEEEEEETT-----EEEE-EEEEEEEEEEECTTHHHHSCCCEEEECSSBCSSSSCC
T ss_pred -----CCCEEEEEECCCE-EEEEEEEEEEEECC-----EEEE-EEEEEEEeccccCCCccCCCCCEEEecCCCcccccCC
Confidence 7889999999998 89999999999998 8999 99999988 43 2 2357999999997653
Q ss_pred --hHHhh-------cCceEEecCCCCCCCCCCcceecCCCCCC-CCC--cccccccCCCceEEEeeEEEECCeEEecCCC
Q 038667 199 --LVSQL-------NSSFSYCIGSLHDPDYLHNKLILGDGAII-DEG--DATPLQFIDGHYYITLEAISVDGRMLDINPN 266 (411)
Q Consensus 199 --~~~ql-------~~~FS~~l~~~~~~~~~~g~l~fGg~~~~-~~~--~~~pl~~~~~~y~v~l~~i~v~g~~~~~~~~ 266 (411)
++.+| .++||+||.+... ..|.|+|||.+.. +.+ .|+|+ ....+|.|.++ |+|+++ ..
T Consensus 260 ~~~~~~L~~qg~I~~~~FS~~L~~~~~---~~G~l~fGgiD~s~y~G~l~~~pv-~~~~~w~v~l~-I~Vgg~--~~--- 329 (451)
T 3qvc_A 260 DPYIVELKTQNKIEQAVYSIYLPPENK---NKGYLTIGGIEERFFDGPLNYEKL-NHDLMWQVDLD-VHFGNV--SS--- 329 (451)
T ss_dssp CCHHHHHHHTTSSSSSEEEEECCTTCT---TEEEEEESSCCGGGEEEEEEEEEC-SSTTSSEEEEE-EEETTE--EE---
T ss_pred CCHHHHHHHcCCCCCCEEEEEEcCCCC---CCCEEEECCcchhhcCCceEEEEc-ccCCeeEEEEE-EEECCc--cC---
Confidence 55555 5799999998632 3489999997643 334 58999 46789999999 999998 11
Q ss_pred cccccCCCCcEEEecccccccccHHHHHHHHHHHHHHhhcCCCcCCCCCC-CCccccccCCCccCCCeEEEEEcCCcEEE
Q 038667 267 IFKRDDSGGGVMIDSGTDVTWLVKEAYEALRDEVMIRLEGEQMRSYSWPD-KLCYHGIMSSDLKGFPTVRFHFRGGAKLA 345 (411)
Q Consensus 267 ~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~g~~~~~~~~~~-~~C~~~~~~~~~~~~P~i~~~f~~g~~~~ 345 (411)
....+||||||++++||++++++|.+++.+.. ....... .+|. . ..+|+|+|+|+ |++++
T Consensus 330 ------~~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~-----~~~~g~y~v~C~-~------~~~P~itf~fg-g~~i~ 390 (451)
T 3qvc_A 330 ------KKANVILDSATSVITVPTEFFNQFVESASVFK-----VPFLSLYVTTCG-N------TKLPTLEYRSP-NKVYT 390 (451)
T ss_dssp ------EEEEEEECTTBSSEEECHHHHHHHHTTTTCEE-----CTTSSCEEEETT-C------TTCCCEEEEET-TEEEE
T ss_pred ------CCceEEEeCCCccccCCHHHHHHHHHHcCCee-----cCCCCeEEeeCC-c------CcCCcEEEEEC-CEEEE
Confidence 14789999999999999999999999994322 1111112 7888 2 37899999998 99999
Q ss_pred EcCCceEEEcC--CCeEEEEEEeCCCCCCcccceeeehhhcceeEEEEECCCCEEEEecCC
Q 038667 346 LEKDSMFYQPR--PDAFCMAVNPASINNRYVNFSLIGMMAQQFYNVGYDIGRKQKTFQRMD 404 (411)
Q Consensus 346 l~~~~y~~~~~--~~~~C~~~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~~riGfa~~~ 404 (411)
|++++|+++.. ++..|+..+...+.. .+.||||++|||++|+|||++++|||||+++
T Consensus 391 lp~~~yi~~~~~~~~~~C~~~i~~~~~~--~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 391 LEPKQYLEPLENIFSALCMLNIVPIDLE--KNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp ECHHHHEEECTTTSTTEEEECEEECCCS--TTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EcHHHheeecccCCCCeEEEEEEeCCCC--CCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 99999999864 356897644433221 1259999999999999999999999999975
No 29
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=1.6e-53 Score=424.59 Aligned_cols=288 Identities=23% Similarity=0.318 Sum_probs=237.2
Q ss_pred cCCCceEEEEEEeCCCCceEEEEEeCCCCceeEeCCCCC--CCCCCCCCCCCCCCCCcccccCCCCCcCCCCCCCCCCCC
Q 038667 55 DISNSLFYVNISIGQPPVPQFTAMDTGSSLLWVHCYPCR--DCSPQLGTIFYPSRSSSYAYVPCDSEHCRYFPYARCSAY 132 (411)
Q Consensus 55 ~~~~~~Y~~~i~iGtP~q~~~~i~DTGSs~~wv~~~~C~--~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~C~~~ 132 (411)
+..+..|+++|.||||||++.|+|||||+++||+|..|. .| ..++.|||++|+||+.
T Consensus 134 n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C--~~~~~ydps~SsT~~~------------------- 192 (453)
T 2bju_A 134 DFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGC--LTKHLYDSSKSRTYEK------------------- 192 (453)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTG--GGSCCBCGGGCTTCEE-------------------
T ss_pred ecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCCcccc--CCCCcCCCccCCceeE-------------------
Confidence 457889999999999999999999999999999999998 47 5689999999999998
Q ss_pred CCcceeeEeeCCCCeeeeeEEEEEEEeeCCCCCceeeecEEEEeEeeec-----c-CCCcceEEecCCCCCc------hH
Q 038667 133 KHRCIYTQLYLIGPETSVFVSTEQLTFKNTDESTIHVQDVVFGCGFSTN-----R-NFKFSGIFGLGIGRSS------LV 200 (411)
Q Consensus 133 ~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~-----~-~~~~~GilGLg~~~~S------~~ 200 (411)
..|.|.+.|++|+ +.|.+++|+|+|++ ++++ +.|||++... + ...++||||||++..+ ++
T Consensus 193 -~~~~~~i~YgdGs-~~G~~~~Dtv~ig~-----~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~ 264 (453)
T 2bju_A 193 -DGTKVEMNYVSGT-VSGFFSKDLVTVGN-----LSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIV 264 (453)
T ss_dssp -EEEEEEEECSSSE-EEEEEEEEEEEETT-----EEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCCCCHH
T ss_pred -CCcEEEEEcCCCC-eEEEEEEEEEEEeC-----cEEE-EEEEEEEEecccCccccccCCceeEeccCCcccccCCCcHH
Confidence 6899999999998 79999999999997 8999 9999998763 2 2458999999998654 33
Q ss_pred Hhh-------cCceEEecCCCCCCCCCCcceecCCCCCC-CCC--cccccccCCCceEEEeeEEEECCeEEecCCCcccc
Q 038667 201 SQL-------NSSFSYCIGSLHDPDYLHNKLILGDGAII-DEG--DATPLQFIDGHYYITLEAISVDGRMLDINPNIFKR 270 (411)
Q Consensus 201 ~ql-------~~~FS~~l~~~~~~~~~~g~l~fGg~~~~-~~~--~~~pl~~~~~~y~v~l~~i~v~g~~~~~~~~~~~~ 270 (411)
.+| .++||+||.+.. ...|.|+|||.+.. +.+ .|+|+ ....+|.|.++ |+|++ .+. .
T Consensus 265 ~~L~~qg~i~~~~FS~~L~~~~---~~~G~l~fGg~D~~~y~G~l~~~pv-~~~~~w~V~l~-I~Vgg-~~~-~------ 331 (453)
T 2bju_A 265 VELKNQNKIENALFTFYLPVHD---KHTGFLTIGGIEERFYEGPLTYEKL-NHDLYWQITLD-AHVGN-IML-E------ 331 (453)
T ss_dssp HHHHHTTSSSSCEEEEECCBTT---TBCEEEEESSCCGGGEEEEEEEEEE-EEETTEEEEEE-EEETT-EEE-E------
T ss_pred HHHHHCCCCCCCEEEEEeCCCC---CCCeEEEECCCCHHHcCCceEEEec-CCCceEEEEEE-EEECc-EEe-c------
Confidence 443 689999999852 23599999997643 333 58998 45679999999 99999 331 1
Q ss_pred cCCCCcEEEecccccccccHHHHHHHHHHHHHHhhcCCCcCCCC--CCCCccccccCCCccCCCeEEEEEcCCcEEEEcC
Q 038667 271 DDSGGGVMIDSGTDVTWLVKEAYEALRDEVMIRLEGEQMRSYSW--PDKLCYHGIMSSDLKGFPTVRFHFRGGAKLALEK 348 (411)
Q Consensus 271 ~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~g~~~~~~~~--~~~~C~~~~~~~~~~~~P~i~~~f~~g~~~~l~~ 348 (411)
+..+||||||++++||.+++++|.+++.+. ..... ...+|+. ..+|+|+|+|+ |++++|++
T Consensus 332 ---~~~aIiDSGTsl~~lP~~~~~~l~~~i~~~------~~~~g~~~~v~C~~-------~~~P~itf~fg-g~~~~l~~ 394 (453)
T 2bju_A 332 ---KANCIVDSGTSAITVPTDFLNKMLQNLDVI------KVPFLPFYVTLCNN-------SKLPTFEFTSE-NGKYTLEP 394 (453)
T ss_dssp ---EEEEEECTTCCSEEECHHHHHHHTTTSSCE------ECTTSSCEEEETTC-------TTCCCEEEECS-SCEEEECH
T ss_pred ---cccEEEcCCCCeEecCHHHHHHHHHHhCCc------ccCCCceEEEecCC-------CCCCcEEEEEC-CEEEEECH
Confidence 478999999999999999999999988431 11111 1278984 27899999997 99999999
Q ss_pred CceEEEcC--CCeEEEE-EEeCCCCCCcccceeeehhhcceeEEEEECCCCEEEEecCC
Q 038667 349 DSMFYQPR--PDAFCMA-VNPASINNRYVNFSLIGMMAQQFYNVGYDIGRKQKTFQRMD 404 (411)
Q Consensus 349 ~~y~~~~~--~~~~C~~-~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~~riGfa~~~ 404 (411)
++|+++.. ++..|+. +....... +.||||++|||++|+|||++++|||||+++
T Consensus 395 ~~yi~~~~~~g~~~C~~~~~~~~~~~---~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 395 EYYLQHIEDVGPGLCMLNIIGLDFPV---PTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp HHHEEECTTTSTTEEEECEEECCCSS---CEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred HHhEeecccCCCceEEEEEEeCCCCC---CCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 99999875 4568985 55443211 259999999999999999999999999875
No 30
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=1.3e-52 Score=421.73 Aligned_cols=314 Identities=19% Similarity=0.262 Sum_probs=244.8
Q ss_pred CCCceEEEEEEeCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCCcCCCCCCCCCCCCCCc
Q 038667 56 ISNSLFYVNISIGQPPVPQFTAMDTGSSLLWVHCYPCRDCSPQLGTIFYPSRSSSYAYVPCDSEHCRYFPYARCSAYKHR 135 (411)
Q Consensus 56 ~~~~~Y~~~i~iGtP~q~~~~i~DTGSs~~wv~~~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~C~~~~~~ 135 (411)
..+..|+++|.||||+|++.|+|||||+++||+|.+| | ..++.|||++|+||+. ..
T Consensus 71 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c--c--~~~~~y~~~~SsT~~~--------------------~~ 126 (455)
T 3lpj_A 71 KSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--P--FLHRYYQRQLSSTYRD--------------------LR 126 (455)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--T--TCSCCCCGGGCTTCEE--------------------EE
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc--c--ccCCcccCCCCCCccc--------------------CC
Confidence 3466899999999999999999999999999999988 6 4678999999999999 67
Q ss_pred ceeeEeeCCCCeeeeeEEEEEEEeeCCCCCceeeecEEEEeEeeec--c--CCCcceEEecCCCCCc--------hHHhh
Q 038667 136 CIYTQLYLIGPETSVFVSTEQLTFKNTDESTIHVQDVVFGCGFSTN--R--NFKFSGIFGLGIGRSS--------LVSQL 203 (411)
Q Consensus 136 ~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~--~--~~~~~GilGLg~~~~S--------~~~ql 203 (411)
|.|.+.|++|+ +.|.+++|+|+|++.. .+.+ .+.|+|+.... + ...++||||||++..+ ++.+|
T Consensus 127 ~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~--~~~~-~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L 202 (455)
T 3lpj_A 127 KGVYVPYTQGK-WEGELGTDLVSIPHGP--NVTV-RANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSL 202 (455)
T ss_dssp EEEEEECSSCE-EEEEEEEEEEECTTSC--SCEE-EEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHH
T ss_pred ccEEEEeCCeE-EEEEEEEEEEEECCCc--ceee-EEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHH
Confidence 89999999998 5999999999998521 1232 36788887655 3 2468999999987553 44454
Q ss_pred ------cCceEEecCCCCCC-------CCCCcceecCCCCCC-CCC--cccccccCCCceEEEeeEEEECCeEEecCCCc
Q 038667 204 ------NSSFSYCIGSLHDP-------DYLHNKLILGDGAII-DEG--DATPLQFIDGHYYITLEAISVDGRMLDINPNI 267 (411)
Q Consensus 204 ------~~~FS~~l~~~~~~-------~~~~g~l~fGg~~~~-~~~--~~~pl~~~~~~y~v~l~~i~v~g~~~~~~~~~ 267 (411)
.++||+||.+.... ....|.|+|||.+.. +.+ .|+|+ ....+|.|.+++|+|+++.+.++...
T Consensus 203 ~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~-~~~~~w~v~l~~i~v~g~~~~~~~~~ 281 (455)
T 3lpj_A 203 VKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPI-RREWYYEVIIVRVEINGQDLKMDCKE 281 (455)
T ss_dssp HHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEEC-CSBTTBBCCEEEEEETTEECCCCGGG
T ss_pred HHccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEec-CCCceeEEEEeEEEECCEEccccccc
Confidence 57999999864211 123599999996633 333 48998 45689999999999999998765443
Q ss_pred ccccCCCCcEEEecccccccccHHHHHHHHHHHHHHhhcCCCcCCC-----CCCCCccccccCCCccCCCeEEEEEcCCc
Q 038667 268 FKRDDSGGGVMIDSGTDVTWLVKEAYEALRDEVMIRLEGEQMRSYS-----WPDKLCYHGIMSSDLKGFPTVRFHFRGGA 342 (411)
Q Consensus 268 ~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~g~~~~~~~-----~~~~~C~~~~~~~~~~~~P~i~~~f~~g~ 342 (411)
+ ....+||||||++++||.+++++|+++|.+.... .... ...++|+.... .....+|+|+|+|+++.
T Consensus 282 ~----~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~---~~~~~~~~~g~~~~C~~~~~-~~~~~~P~i~f~f~g~~ 353 (455)
T 3lpj_A 282 Y----NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASST---EKFPDGFWLGEQLVCWQAGT-TPWNIFPVISLYLMGEV 353 (455)
T ss_dssp G----GSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTT---SCCCHHHHTTCSCEEESTTC-CCGGGSCCEEEEEECSS
T ss_pred c----CCCeEEEECCCcceeCCHHHHHHHHHHhhhhccc---cccCcccccCcceecccccC-CchhcCCcEEEEEcCCC
Confidence 3 1468999999999999999999999999987631 1111 11389995431 12236999999999443
Q ss_pred -----EEEEcCCceEEEcCCC----eEEEEEEeCCCCCCcccceeeehhhcceeEEEEECCCCEEEEecCCCCCccC
Q 038667 343 -----KLALEKDSMFYQPRPD----AFCMAVNPASINNRYVNFSLIGMMAQQFYNVGYDIGRKQKTFQRMDCEVLDD 410 (411)
Q Consensus 343 -----~~~l~~~~y~~~~~~~----~~C~~~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~~riGfa~~~c~~~~~ 410 (411)
+|+|++++|+++.... ..|+++...... +.||||+.|||++|+|||++++|||||+++|.+.++
T Consensus 354 ~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~f~~~~~~----~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~ 426 (455)
T 3lpj_A 354 TNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQSS----TGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDE 426 (455)
T ss_dssp TTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEES----SCEEECHHHHTTEEEEEETTTTEEEEEEETTCCCCS
T ss_pred cCceEEEEECHHHheEeccCCCCCCceEEEEeccCCC----CcEEEChHHhCCeEEEEECCCCEEEEEecccccccc
Confidence 5999999999986432 589874322111 249999999999999999999999999999988764
No 31
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=1.6e-52 Score=411.97 Aligned_cols=320 Identities=20% Similarity=0.320 Sum_probs=243.7
Q ss_pred cCCCceEEEEEEeCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCCcCCCCC---CCCCCC
Q 038667 55 DISNSLFYVNISIGQPPVPQFTAMDTGSSLLWVHCYPCRDCSPQLGTIFYPSRSSSYAYVPCDSEHCRYFP---YARCSA 131 (411)
Q Consensus 55 ~~~~~~Y~~~i~iGtP~q~~~~i~DTGSs~~wv~~~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~---~~~C~~ 131 (411)
+..+.+|+++|.|||| |+|||||+++||+|.+|. +|+.++|+++.|.... ...|..
T Consensus 10 ~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~----------------~~~~~~C~s~~C~~~~~~~~~sc~~ 68 (381)
T 1t6e_X 10 DPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQ----------------PPAEIPCSSPTCLLANAYPAPGCPA 68 (381)
T ss_dssp CTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTC----------------CCCCCBTTSHHHHHHHSSCCTTCCC
T ss_pred cCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCC----------------CCCccCCCCchhccccCCCCCCCCC
Confidence 4678999999999998 999999999999987641 3566778887775421 225543
Q ss_pred -------CCCcc-eeeEeeCCCCeeeeeEEEEEEEeeCCCCCceeeecE----EEEeEeeec---cCCCcceEEecCCCC
Q 038667 132 -------YKHRC-IYTQLYLIGPETSVFVSTEQLTFKNTDESTIHVQDV----VFGCGFSTN---RNFKFSGIFGLGIGR 196 (411)
Q Consensus 132 -------~~~~~-~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~----~fg~~~~~~---~~~~~~GilGLg~~~ 196 (411)
.+..| .|.+.|++|+.+.|.+++|+|+|++.++ .+.++++ .|||++... +...++||||||++.
T Consensus 69 ~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g-~~~v~~~~~~~~Fg~~~~~~~~~~~~~~dGIlGLg~~~ 147 (381)
T 1t6e_X 69 PSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDG-SKPVSKVNVGVLAACAPSKLLASLPRGSTGVAGLANSG 147 (381)
T ss_dssp CCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESS-SSEEEEEEEEEEEEECCGGGGTTSCTTEEEEEECSSST
T ss_pred ccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCC-CccccceeeeeEeecCcccccCCCCCCCceEEEeCCCc
Confidence 12457 5999999999789999999999986322 1455554 679998763 335689999999999
Q ss_pred CchHHhh------cCceEEecCCCCCCCCCCcceecCCCCCC-----CCCcccccccC--CCceEEEeeEEEECCeEEec
Q 038667 197 SSLVSQL------NSSFSYCIGSLHDPDYLHNKLILGDGAII-----DEGDATPLQFI--DGHYYITLEAISVDGRMLDI 263 (411)
Q Consensus 197 ~S~~~ql------~~~FS~~l~~~~~~~~~~g~l~fGg~~~~-----~~~~~~pl~~~--~~~y~v~l~~i~v~g~~~~~ 263 (411)
+|+++|| .++||+||.+. ..|.|+|||.+.. ....|+||... ..+|+|.|++|+|+++.+.+
T Consensus 148 ~s~~~ql~~~~~~~~~FS~~L~~~-----~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~~ 222 (381)
T 1t6e_X 148 LALPAQVASAQKVANRFLLCLPTG-----GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPV 222 (381)
T ss_dssp TSHHHHHHHHHTCCSEEEEECCSS-----SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECCC
T ss_pred chhHHHHhhhcccCceEEEEeCCC-----CCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcCEEecC
Confidence 9999998 48999999874 3499999996542 24569999532 34677999999999999887
Q ss_pred CCCcccccCCCCcEEEecccccccccHHHHHHHHHHHHHHhhc-----CCCcCC--C-CCCCCccccccCC---CccCCC
Q 038667 264 NPNIFKRDDSGGGVMIDSGTDVTWLVKEAYEALRDEVMIRLEG-----EQMRSY--S-WPDKLCYHGIMSS---DLKGFP 332 (411)
Q Consensus 264 ~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~g-----~~~~~~--~-~~~~~C~~~~~~~---~~~~~P 332 (411)
+...|. ++++||||||++++||+++|++|+++|.+++.. ..+++. . ...++|+...... ....+|
T Consensus 223 ~~~~~~----~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P 298 (381)
T 1t6e_X 223 PEGALA----TGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGYAVP 298 (381)
T ss_dssp CTTCSC----TTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCEETTEECCC
T ss_pred CHHHcc----CCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCCCcccccCCcCC
Confidence 755552 368999999999999999999999999887741 112221 1 1227999543211 013799
Q ss_pred eEEEEEcCCcEEEEcCCceEEEcCCCeEEEEEEeCCCC---CCcccceeeehhhcceeEEEEECCCCEEEEecCCC
Q 038667 333 TVRFHFRGGAKLALEKDSMFYQPRPDAFCMAVNPASIN---NRYVNFSLIGMMAQQFYNVGYDIGRKQKTFQRMDC 405 (411)
Q Consensus 333 ~i~~~f~~g~~~~l~~~~y~~~~~~~~~C~~~~~~~~~---~~~~~~~IlG~~fl~~~yvvfD~~~~riGfa~~~c 405 (411)
+|+|+|+||++|+|++++|+++..++.+|+++...... ....+.||||+.|||++|+|||++++|||||++..
T Consensus 299 ~i~f~f~gg~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGfA~~~~ 374 (381)
T 1t6e_X 299 NVQLGLDGGSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLPH 374 (381)
T ss_dssp CEEEEETTSCEEEECHHHHEEEEETTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEECCT
T ss_pred eEEEEECCCcEEEeCCCeEEEEcCCCeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEEecccC
Confidence 99999986799999999999987667899988775431 00123599999999999999999999999998653
No 32
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=2.6e-52 Score=413.61 Aligned_cols=315 Identities=19% Similarity=0.257 Sum_probs=241.3
Q ss_pred CCceEEEEEEeCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCCcCCCCCCCCCCCCCCcc
Q 038667 57 SNSLFYVNISIGQPPVPQFTAMDTGSSLLWVHCYPCRDCSPQLGTIFYPSRSSSYAYVPCDSEHCRYFPYARCSAYKHRC 136 (411)
Q Consensus 57 ~~~~Y~~~i~iGtP~q~~~~i~DTGSs~~wv~~~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~C~~~~~~~ 136 (411)
.+..|+++|.||||||++.|+|||||+++||+|.+| | ..++.|||++|+||+. ..|
T Consensus 26 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c--~--~~~~~y~~~~SsT~~~--------------------~~~ 81 (402)
T 3vf3_A 26 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--P--FLHRYYQRQLSSTYRD--------------------LRK 81 (402)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--T--TCSCCCCGGGCTTCEE--------------------EEE
T ss_pred CCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC--C--cccCCcCcccCccccc--------------------CCC
Confidence 457899999999999999999999999999999988 5 4678999999999999 688
Q ss_pred eeeEeeCCCCeeeeeEEEEEEEeeCCCCCceeee-cEEEEeEeeec--c--CCCcceEEecCCCCCc--------hHHhh
Q 038667 137 IYTQLYLIGPETSVFVSTEQLTFKNTDESTIHVQ-DVVFGCGFSTN--R--NFKFSGIFGLGIGRSS--------LVSQL 203 (411)
Q Consensus 137 ~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~-~~~fg~~~~~~--~--~~~~~GilGLg~~~~S--------~~~ql 203 (411)
.|.+.|++|+ +.|.+++|+|+|++. ..+. .+.|+++.... + ...++||||||++..+ ++.||
T Consensus 82 ~~~i~Yg~Gs-~~G~~~~D~v~ig~~----~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L 156 (402)
T 3vf3_A 82 GVYVPYTQGK-WEGELGTDLVSIPHG----PNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSL 156 (402)
T ss_dssp EEEEECSSCE-EEEEEEEEEEECTTS----CSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHH
T ss_pred EEEEEECcEE-EEEEEEEEEEEECCc----cccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHH
Confidence 9999999998 599999999999842 2222 34578776654 3 2468999999987543 44454
Q ss_pred ------cCceEEecCCCCCC-------CCCCcceecCCCCCC-CCC--cccccccCCCceEEEeeEEEECCeEEecCCCc
Q 038667 204 ------NSSFSYCIGSLHDP-------DYLHNKLILGDGAII-DEG--DATPLQFIDGHYYITLEAISVDGRMLDINPNI 267 (411)
Q Consensus 204 ------~~~FS~~l~~~~~~-------~~~~g~l~fGg~~~~-~~~--~~~pl~~~~~~y~v~l~~i~v~g~~~~~~~~~ 267 (411)
.++||+||.+.... ....|.|+|||.+.. +.+ .|+|+ ....+|.|.+++|+|+++.+.++...
T Consensus 157 ~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~-~~~~~w~v~l~~i~v~g~~~~~~~~~ 235 (402)
T 3vf3_A 157 VKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPI-RREWYYEVIIVRVEINGQDLKMDCKE 235 (402)
T ss_dssp HHHSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEEC-SSBTTBEECEEEEEETTEECCCCGGG
T ss_pred HHccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeC-CcCcEEEEEEeEEEECCEEecccccc
Confidence 57999999753110 223589999996643 333 48898 44689999999999999998765443
Q ss_pred ccccCCCCcEEEecccccccccHHHHHHHHHHHHHHhhcCCCcCC--CCCCCCccccccCCCccCCCeEEEEEcCCc---
Q 038667 268 FKRDDSGGGVMIDSGTDVTWLVKEAYEALRDEVMIRLEGEQMRSY--SWPDKLCYHGIMSSDLKGFPTVRFHFRGGA--- 342 (411)
Q Consensus 268 ~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~g~~~~~~--~~~~~~C~~~~~~~~~~~~P~i~~~f~~g~--- 342 (411)
+ ....+||||||++++||.+++++|++++.+.......... ....++|+.... .....+|+|+|+|+++.
T Consensus 236 ~----~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~-~~~~~~P~i~f~f~g~~~~~ 310 (402)
T 3vf3_A 236 Y----NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGT-TPWNIFPVISLYLMGEVTNQ 310 (402)
T ss_dssp G----GSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCTTGGGTCSCEEEETTC-CCGGGSCCEEEEEECSSTTE
T ss_pred c----CCCeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCcccccccccccccccc-chHhhCCceEEEEecCCCCc
Confidence 3 1468999999999999999999999999987531001111 111389995431 11237999999999543
Q ss_pred --EEEEcCCceEEEcCC----CeEEEEEEeCCCCCCcccceeeehhhcceeEEEEECCCCEEEEecCCCCCccC
Q 038667 343 --KLALEKDSMFYQPRP----DAFCMAVNPASINNRYVNFSLIGMMAQQFYNVGYDIGRKQKTFQRMDCEVLDD 410 (411)
Q Consensus 343 --~~~l~~~~y~~~~~~----~~~C~~~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~~riGfa~~~c~~~~~ 410 (411)
+++|++++|+++... ...|+++...... +.||||+.|||++|+|||++++|||||+++|++.++
T Consensus 311 ~~~~~l~~~~yi~~~~~~~~~~~~C~~~~~~~~~----~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~ 380 (402)
T 3vf3_A 311 SFRITILPQQYLRPVEDVATSQDDCYKFAISQSS----TGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDE 380 (402)
T ss_dssp EEEEEECHHHHEEECCCGGGTTEEEEEECEEEES----SCEEECHHHHTTEEEEEEGGGTEEEEEEETTCCBCS
T ss_pred eEEEEECHHHheehhccCCCCCceEEEEeccCCC----CcEEEChHHhCCeEEEEECCCCEEEEEecccCcccC
Confidence 599999999998643 2589874322111 249999999999999999999999999999998754
No 33
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=3.5e-51 Score=396.68 Aligned_cols=289 Identities=15% Similarity=0.182 Sum_probs=228.6
Q ss_pred CceEEEEEEeCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCCcCCCCCCCCCCCCCCcce
Q 038667 58 NSLFYVNISIGQPPVPQFTAMDTGSSLLWVHCYPCRDCSPQLGTIFYPSRSSSYAYVPCDSEHCRYFPYARCSAYKHRCI 137 (411)
Q Consensus 58 ~~~Y~~~i~iGtP~q~~~~i~DTGSs~~wv~~~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~C~~~~~~~~ 137 (411)
+..|+++|.||||+|++.|+|||||+++||+|. +.|+|++|+++ ..|.
T Consensus 11 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~----------~~y~~s~Ss~~----------------------~~~~ 58 (340)
T 1wkr_A 11 LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD----------KSYVKTSTSSA----------------------TSDK 58 (340)
T ss_dssp SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS----------SCCCCCTTCEE----------------------EEEE
T ss_pred CcEEEEEEEECCCCcEEEEEEeCCChhheecCC----------CccCCcCCccc----------------------cCce
Confidence 569999999999999999999999999999764 57999888753 4679
Q ss_pred eeEeeCCCCeeeeeEEEEEEEeeCCCCCceeeecEEEEeEeeec-cCCCcceEEecCCCCCch--------------HHh
Q 038667 138 YTQLYLIGPETSVFVSTEQLTFKNTDESTIHVQDVVFGCGFSTN-RNFKFSGIFGLGIGRSSL--------------VSQ 202 (411)
Q Consensus 138 ~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~-~~~~~~GilGLg~~~~S~--------------~~q 202 (411)
|.+.|++|+ +.|.+++|+|+|++ ++++++.|||++... +. .++||||||+...++ +.+
T Consensus 59 ~~i~Yg~Gs-~~G~~~~Dtv~~g~-----~~v~~~~fg~~~~~~~~~-~~~GilGLg~~~~s~~~~~~~~~~~~~~~~~~ 131 (340)
T 1wkr_A 59 VSVTYGSGS-FSGTEYTDTVTLGS-----LTIPKQSIGVASRDSGFD-GVDGILGVGPVDLTVGTLSPHTSTSIPTVTDN 131 (340)
T ss_dssp EEEECSSCE-EEEEEEEEEEEETT-----EEEEEEEEEEEEEEESCT-TCSEEEECSCGGGGTTSEESCTTCCCCCHHHH
T ss_pred EEEEECCcE-EEEEEEEEEEEECC-----EEEcceEEEEEEccCCCc-CCCcEEECCccccccccccccccccCCCHHHH
Confidence 999999998 79999999999987 899999999999865 54 489999999976543 444
Q ss_pred h-------cCceEEecCCCCCCCCCCcceecCCCCC-CCCC--cccccccC---CCceEEEeeEEEECC-eEEecCCCcc
Q 038667 203 L-------NSSFSYCIGSLHDPDYLHNKLILGDGAI-IDEG--DATPLQFI---DGHYYITLEAISVDG-RMLDINPNIF 268 (411)
Q Consensus 203 l-------~~~FS~~l~~~~~~~~~~g~l~fGg~~~-~~~~--~~~pl~~~---~~~y~v~l~~i~v~g-~~~~~~~~~~ 268 (411)
| .++||+||.+........|.|+|||.+. .+.+ .|+|+... ..+|.|. .+|+|++ +.+..
T Consensus 132 l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~~~~~l~~----- 205 (340)
T 1wkr_A 132 LFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGSSTSILS----- 205 (340)
T ss_dssp HHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEETTTEEEEE-----
T ss_pred HHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEECCCeEccC-----
Confidence 4 5899999987432223359999999663 2344 59999543 6799999 9999998 77642
Q ss_pred cccCCCCcEEEecccccccccHHHHHHHHHHHHHHhhcCCCcCCCCC-CCCccccccCCCccCCCeEEEEEcCCcEEEEc
Q 038667 269 KRDDSGGGVMIDSGTDVTWLVKEAYEALRDEVMIRLEGEQMRSYSWP-DKLCYHGIMSSDLKGFPTVRFHFRGGAKLALE 347 (411)
Q Consensus 269 ~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~g~~~~~~~~~-~~~C~~~~~~~~~~~~P~i~~~f~~g~~~~l~ 347 (411)
...+||||||++++||++++++|.+++.+.+. ..... ..+|... ..+|+|+|+|+ |++++|+
T Consensus 206 -----~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~-----~~~g~~~~~C~~~------~~~p~i~f~f~-g~~~~i~ 268 (340)
T 1wkr_A 206 -----STAGIVDTGTTLTLIASDAFAKYKKATGAVAD-----NNTGLLRLTTAQY------ANLQSLFFTIG-GQTFELT 268 (340)
T ss_dssp -----EEEEEECTTBCSEEECHHHHHHHHHHHTCEEC-----TTTSSEEECHHHH------HTCCCEEEEET-TEEEEEC
T ss_pred -----CCeEEEeCCcccccCCHHHHHHHHHhhCCEEc-----CCCCeEEeecccc------ccCCcEEEEEC-CEEEEEc
Confidence 25899999999999999999999988853321 11111 2789843 37899999998 8999999
Q ss_pred CCceEEEcC-------CCeEEE-EEEeCCCCCCcccceeeehhhcceeEEEEECCCCEEEEecCCCCCc
Q 038667 348 KDSMFYQPR-------PDAFCM-AVNPASINNRYVNFSLIGMMAQQFYNVGYDIGRKQKTFQRMDCEVL 408 (411)
Q Consensus 348 ~~~y~~~~~-------~~~~C~-~~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~~~~riGfa~~~c~~~ 408 (411)
|++|+++.. ....|+ .+.........+..||||+.|||++|+|||++++|||||+++|..-
T Consensus 269 ~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~ 337 (340)
T 1wkr_A 269 ANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTSFTTA 337 (340)
T ss_dssp TGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECTTTTC
T ss_pred HHHhccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecCCCCC
Confidence 999998753 224675 4544221111122499999999999999999999999999999863
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=8.8e-41 Score=307.45 Aligned_cols=210 Identities=21% Similarity=0.337 Sum_probs=177.2
Q ss_pred cCCCceEEEEEEeCCCCceEEEEEeCCCCceeEeCCCCC---CCCCCCCCCCCCCCCCcccccCCCCCcCCCCCCCCCCC
Q 038667 55 DISNSLFYVNISIGQPPVPQFTAMDTGSSLLWVHCYPCR---DCSPQLGTIFYPSRSSSYAYVPCDSEHCRYFPYARCSA 131 (411)
Q Consensus 55 ~~~~~~Y~~~i~iGtP~q~~~~i~DTGSs~~wv~~~~C~---~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~C~~ 131 (411)
++.+..|+++|.||||+|++.|+|||||+++||+|..|. .|. .++.|||++|+||+.
T Consensus 9 n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~--~~~~y~~~~SsT~~~------------------ 68 (239)
T 1b5f_A 9 NDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACR--AHSMYESSDSSTYKE------------------ 68 (239)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHH--TSCCBCGGGCTTCEE------------------
T ss_pred ecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccC--CCCCCCCccCCCeee------------------
Confidence 457889999999999999999999999999999999997 484 568999999999998
Q ss_pred CCCcceeeEeeCCCCeeeeeEEEEEEEeeCCCCCceeeecEEEEeEeeec---c-CCCcceEEecCCCCCc------hHH
Q 038667 132 YKHRCIYTQLYLIGPETSVFVSTEQLTFKNTDESTIHVQDVVFGCGFSTN---R-NFKFSGIFGLGIGRSS------LVS 201 (411)
Q Consensus 132 ~~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~---~-~~~~~GilGLg~~~~S------~~~ 201 (411)
..|.|.+.|++|+ +.|.+++|+|+|++ ++++++.|||+.... | ...++||||||++..+ +++
T Consensus 69 --~~~~~~i~Yg~Gs-~~G~~~~D~v~~g~-----~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~p~~~~l~~ 140 (239)
T 1b5f_A 69 --NGTFGAIIYGTGS-ITGFFSQDSVTIGD-----LVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTISVPVWYNMLN 140 (239)
T ss_dssp --EEEEEEEECSSCE-EEEEEEEEEEEETT-----EEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSSCCHHHHHHH
T ss_pred --CCcEEEEEECCCc-EEEEEEEEEEEECC-----cEEccEEEEEEEeccCccccccCcceEEecCccccccHHHHHHHH
Confidence 6789999999998 69999999999987 899999999998764 3 3468999999999876 334
Q ss_pred h--h-cCceEEecCCCCCCCCCCcceecCCCCCC-CCC--cccccccCCCceEEEeeEEEECCeEEecCCCcccccCCCC
Q 038667 202 Q--L-NSSFSYCIGSLHDPDYLHNKLILGDGAII-DEG--DATPLQFIDGHYYITLEAISVDGRMLDINPNIFKRDDSGG 275 (411)
Q Consensus 202 q--l-~~~FS~~l~~~~~~~~~~g~l~fGg~~~~-~~~--~~~pl~~~~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~~ 275 (411)
| + .++||+||.+..+ ....|.|+|||.+.. +.+ .|+|+. ...+|.|.|++|+|+++.+.+.. ...
T Consensus 141 qg~i~~~~FS~~l~~~~~-~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~~~-------~~~ 211 (239)
T 1b5f_A 141 QGLVKERRFSFWLNRNVD-EEEGGELVFGGLDPNHFRGDHTYVPVT-YQYYWQFGIGDVLIGDKSTGFCA-------PGC 211 (239)
T ss_dssp TTCCSSSEEEEEECCSCS-SSCCEEEEETSCCGGGEEEEEEEEEEE-EETTEEEEECCEEETTEECCTTT-------TCE
T ss_pred CCCCCCCEEEEEEeCCCC-CCCCeEEEECCcChhhccCceEEEEcc-cCCeEEEEeeEEEECCEEecccC-------CCC
Confidence 4 2 6899999987532 223599999996633 233 588984 46799999999999999876431 246
Q ss_pred cEEEecccccccccHHHHHHHHHHHH
Q 038667 276 GVMIDSGTDVTWLVKEAYEALRDEVM 301 (411)
Q Consensus 276 ~~iiDSGTt~~~lp~~~~~~l~~~l~ 301 (411)
.+||||||++++||.+++++|.+++.
T Consensus 212 ~aiiDTGTt~~~lP~~~~~~i~~~ig 237 (239)
T 1b5f_A 212 QAFADSGTSLLSGPTAIVTQINHAIG 237 (239)
T ss_dssp EEEECTTCSSEEECHHHHHHHHHHTT
T ss_pred EEEEecCcchhhCCHHHHHHHHHHhC
Confidence 89999999999999999999999883
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=1.2e-34 Score=267.14 Aligned_cols=216 Identities=17% Similarity=0.233 Sum_probs=165.2
Q ss_pred eeeecEEEEeEeeec---c-CCCcceEEecCCCCCc------hHHhh-------cCceEEecCCCCCCCCCCcceecCCC
Q 038667 167 IHVQDVVFGCGFSTN---R-NFKFSGIFGLGIGRSS------LVSQL-------NSSFSYCIGSLHDPDYLHNKLILGDG 229 (411)
Q Consensus 167 ~~~~~~~fg~~~~~~---~-~~~~~GilGLg~~~~S------~~~ql-------~~~FS~~l~~~~~~~~~~g~l~fGg~ 229 (411)
++++++.|||++... + ...++||||||++..+ ++.|| .++||+||.+.... ...|.|+|||.
T Consensus 3 ~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~-~~~G~l~fGg~ 81 (241)
T 1lya_B 3 VKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDA-QPGGELMLGGT 81 (241)
T ss_dssp EEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTC-SSCEEEEETSC
T ss_pred eEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCC-CCCcEEEECCc
Confidence 789999999999864 3 3468999999998654 34444 68999999986432 12599999997
Q ss_pred CCC-CCC--cccccccCCCceEEEeeEEEECCeEEecCCCcccccCCCCcEEEecccccccccHHHHHHHHHHHHHHhhc
Q 038667 230 AII-DEG--DATPLQFIDGHYYITLEAISVDGRMLDINPNIFKRDDSGGGVMIDSGTDVTWLVKEAYEALRDEVMIRLEG 306 (411)
Q Consensus 230 ~~~-~~~--~~~pl~~~~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~g 306 (411)
+.. +.+ .|+|+. ...+|.|.+++|+|+++.+... ....+||||||++++||.+++++|.+++.+...
T Consensus 82 d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~~--------~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~- 151 (241)
T 1lya_B 82 DSKYYKGSLSYLNVT-RKAYWQVHLDQVEVASGLTLCK--------EGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPL- 151 (241)
T ss_dssp CGGGEEEEEEEEECS-SBTTBEEEEEEEEETTSCEEST--------TCEEEEECTTCSSEEECHHHHHHHHHHHTCEEE-
T ss_pred CHHHcCCceEEEECc-cccEEEEEEeEEEECCeeEecc--------CCCEEEEECCCccccCCHHHHHHHHHHhCCeec-
Confidence 643 333 589984 5689999999999999865321 257899999999999999999999999843221
Q ss_pred CCCcCCCCCCCCccccccCCCccCCCeEEEEEcCCcEEEEcCCceEEEcCC--CeEEEE-EEeCCCCCCcccceeeehhh
Q 038667 307 EQMRSYSWPDKLCYHGIMSSDLKGFPTVRFHFRGGAKLALEKDSMFYQPRP--DAFCMA-VNPASINNRYVNFSLIGMMA 383 (411)
Q Consensus 307 ~~~~~~~~~~~~C~~~~~~~~~~~~P~i~~~f~~g~~~~l~~~~y~~~~~~--~~~C~~-~~~~~~~~~~~~~~IlG~~f 383 (411)
.......+|+.. ..+|+|+|+|+ |++++|++++|+++... +..|+. +..........+.||||++|
T Consensus 152 ----~~g~~~~~C~~~------~~~p~i~f~f~-g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~f 220 (241)
T 1lya_B 152 ----IQGEYMIPCEKV------STLPAITLKLG-GKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGDVF 220 (241)
T ss_dssp ----ETTEEEEEGGGG------GGSCCEEEEET-TEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEEECHHH
T ss_pred ----cCCcEEEECCCC------ccCCeEEEEEC-CEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEEechHH
Confidence 111112789853 37899999997 99999999999998743 568985 65542111112359999999
Q ss_pred cceeEEEEECCCCEEEEecCC
Q 038667 384 QQFYNVGYDIGRKQKTFQRMD 404 (411)
Q Consensus 384 l~~~yvvfD~~~~riGfa~~~ 404 (411)
||++|+|||++++|||||+++
T Consensus 221 l~~~y~vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 221 IGRYYTVFDRDNNRVGFAEAA 241 (241)
T ss_dssp HTTEEEEEETTTTEEEEEEEC
T ss_pred hcceEEEEECCCCEEEEEEcC
Confidence 999999999999999999874
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.89 E-value=1.6e-23 Score=163.86 Aligned_cols=84 Identities=27% Similarity=0.505 Sum_probs=78.0
Q ss_pred cCCCceEEEEEEeCCCCceEEEEEeCCCCceeEeCCCCC----CCCCCCCCCCCCCCCCcccccCCCCCcCCCCCCCCCC
Q 038667 55 DISNSLFYVNISIGQPPVPQFTAMDTGSSLLWVHCYPCR----DCSPQLGTIFYPSRSSSYAYVPCDSEHCRYFPYARCS 130 (411)
Q Consensus 55 ~~~~~~Y~~~i~iGtP~q~~~~i~DTGSs~~wv~~~~C~----~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~C~ 130 (411)
+..+..|+++|.||||||++.|+|||||+++||+|..|. .|. .++.|||++|+||+.
T Consensus 9 n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~--~~~~y~p~~SsT~~~----------------- 69 (97)
T 1lya_A 9 NYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACW--IHHKYNSDKSSTYVK----------------- 69 (97)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHH--TSCCBCGGGCTTCEE-----------------
T ss_pred ECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccC--CCCCCCchhCCCcee-----------------
Confidence 457889999999999999999999999999999999998 484 578999999999998
Q ss_pred CCCCcceeeEeeCCCCeeeeeEEEEEEEeeC
Q 038667 131 AYKHRCIYTQLYLIGPETSVFVSTEQLTFKN 161 (411)
Q Consensus 131 ~~~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~ 161 (411)
..|.|.+.|++|+ +.|.+++|+|+|++
T Consensus 70 ---~~~~~~i~Yg~Gs-~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 70 ---NGTSFDIHYGSGS-LSGYLSQDTVSVPC 96 (97)
T ss_dssp ---EEEEEEEECSSCE-EEEEEEEEEEEESC
T ss_pred ---CCCcEEEEECCcE-EEEEEEEEEEEECC
Confidence 6889999999998 79999999999986
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.66 E-value=1.1e-16 Score=122.63 Aligned_cols=80 Identities=16% Similarity=0.289 Sum_probs=63.9
Q ss_pred CCccccccCCCccCCCeEEEEEcCCcEEEEcCCceEEEcCC--CeEEEE-EEeCCCCCCcccceeeehhhcceeEEEEEC
Q 038667 317 KLCYHGIMSSDLKGFPTVRFHFRGGAKLALEKDSMFYQPRP--DAFCMA-VNPASINNRYVNFSLIGMMAQQFYNVGYDI 393 (411)
Q Consensus 317 ~~C~~~~~~~~~~~~P~i~~~f~~g~~~~l~~~~y~~~~~~--~~~C~~-~~~~~~~~~~~~~~IlG~~fl~~~yvvfD~ 393 (411)
.+|... ..+|+|+|+|+ |++++|+|++|++.... +..|+. +..... +..++.||||+.|||++|+|||+
T Consensus 5 v~C~~~------~~~P~i~f~~g-g~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~-~~~~~~~ILGd~Fl~~~y~vfD~ 76 (87)
T 1b5f_B 5 VDCNTL------SSMPNVSFTIG-GKKFGLTPEQYILKVGKGEATQCISGFTAMDA-TLLGPLWILGDVFMRPYHTVFDY 76 (87)
T ss_dssp ECGGGG------GGCCCEEEEET-TEEEEECHHHHEEEESCTTTCEEEESEEECCC-BSSSBEEEECHHHHTTEEEEEET
T ss_pred EECCCC------CcCCcEEEEEC-CEEEEECHHHhEEEccCCCCCEEEEEEEECCC-CCCCCeEEechHHhccEEEEEEC
Confidence 688843 37999999998 99999999999988643 468986 544321 11124699999999999999999
Q ss_pred CCCEEEEecCC
Q 038667 394 GRKQKTFQRMD 404 (411)
Q Consensus 394 ~~~riGfa~~~ 404 (411)
+++|||||+++
T Consensus 77 ~~~riGfA~~~ 87 (87)
T 1b5f_B 77 GNLLVGFAEAA 87 (87)
T ss_dssp TTTEEEEEEEC
T ss_pred CCCEEEEEEcC
Confidence 99999999864
No 38
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=93.74 E-value=0.084 Score=43.53 Aligned_cols=28 Identities=11% Similarity=0.140 Sum_probs=25.5
Q ss_pred eeeehhhcceeEEEEECCCCEEEEecCC
Q 038667 377 SLIGMMAQQFYNVGYDIGRKQKTFQRMD 404 (411)
Q Consensus 377 ~IlG~~fl~~~yvvfD~~~~riGfa~~~ 404 (411)
.|||..||+.+-.+.|++++++-|...+
T Consensus 109 ~LLGmD~L~~~~~~ID~~~~~L~l~~~~ 136 (148)
T 3s8i_A 109 MLLGLDMLRRHQCSIDLKKNVLVIGTTG 136 (148)
T ss_dssp EEECHHHHHHTTCEEETTTTEEECTTTC
T ss_pred eeccHHHHHhCCEEEEcCCCEEEEccCC
Confidence 8999999999999999999999987643
No 39
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=92.78 E-value=0.16 Score=41.62 Aligned_cols=31 Identities=26% Similarity=0.418 Sum_probs=27.0
Q ss_pred CCceEEEEEEeCCCCceEEEEEeCCCCceeEeC
Q 038667 57 SNSLFYVNISIGQPPVPQFTAMDTGSSLLWVHC 89 (411)
Q Consensus 57 ~~~~Y~~~i~iGtP~q~~~~i~DTGSs~~wv~~ 89 (411)
..+.+++++.|+ ++++.++||||++.+.+..
T Consensus 23 ~~~~~~v~v~In--G~~~~~LvDTGAs~s~is~ 53 (148)
T 2i1a_A 23 QVPMLYINIEIN--NYPVKAFVDTGAQTTIMST 53 (148)
T ss_dssp CCCCCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred ccceEEEEEEEC--CEEEEEEEECCCCccccCH
Confidence 467899999998 5899999999999998854
No 40
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=91.72 E-value=0.29 Score=40.04 Aligned_cols=26 Identities=15% Similarity=0.082 Sum_probs=24.3
Q ss_pred eeeehhhcceeEEEEECCCCEEEEec
Q 038667 377 SLIGMMAQQFYNVGYDIGRKQKTFQR 402 (411)
Q Consensus 377 ~IlG~~fl~~~yvvfD~~~~riGfa~ 402 (411)
.|||..||+.+-+..|+.+++|-|..
T Consensus 110 ~iLG~d~L~~~~~~ID~~~~~l~l~~ 135 (148)
T 2i1a_A 110 VLIGLDMLKRHLACVDLKENVLRIAE 135 (148)
T ss_dssp EEECHHHHHHTTCEEETTTTEEEETT
T ss_pred eEecHHHHhhCCEEEECCCCEEEEcc
Confidence 89999999999999999999999863
No 41
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=88.85 E-value=0.73 Score=37.82 Aligned_cols=32 Identities=16% Similarity=0.325 Sum_probs=27.1
Q ss_pred CCceEEEEEEeCCCCceEEEEEeCCCCceeEeCC
Q 038667 57 SNSLFYVNISIGQPPVPQFTAMDTGSSLLWVHCY 90 (411)
Q Consensus 57 ~~~~Y~~~i~iGtP~q~~~~i~DTGSs~~wv~~~ 90 (411)
...-|++++.|+ ++++.++||||++.+.+...
T Consensus 21 ~~~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 21 QVTMLYINCKVN--GHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp -CCCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred ccCEEEEEEEEC--CEEEEEEEeCCCCcEeeCHH
Confidence 456789999998 59999999999999988654
No 42
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=85.24 E-value=1.1 Score=33.99 Aligned_cols=27 Identities=26% Similarity=0.268 Sum_probs=23.4
Q ss_pred EEEEEeCCCCceEEEEEeCCCCceeEeCC
Q 038667 62 YVNISIGQPPVPQFTAMDTGSSLLWVHCY 90 (411)
Q Consensus 62 ~~~i~iGtP~q~~~~i~DTGSs~~wv~~~ 90 (411)
++.|.|| .|.+.+++|||.+++-+.-.
T Consensus 10 ~vtvkI~--Gq~~eaLLDTGAD~TVl~~~ 36 (99)
T 2hs1_A 10 LVTIKIG--GQLKEALLDTGADDTIIEEM 36 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSEEESCC
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEecc
Confidence 5779999 59999999999999999643
No 43
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=85.09 E-value=0.9 Score=34.82 Aligned_cols=26 Identities=19% Similarity=0.151 Sum_probs=23.1
Q ss_pred EEEEEEeCCCCceEEEEEeCCCCceeEe
Q 038667 61 FYVNISIGQPPVPQFTAMDTGSSLLWVH 88 (411)
Q Consensus 61 Y~~~i~iGtP~q~~~~i~DTGSs~~wv~ 88 (411)
-++.|.|| +|.+.+++|||.+++-+.
T Consensus 9 P~v~v~I~--Gq~~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 9 PTTIVLIN--DTPLNVLLDTGADTSVLT 34 (104)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEE
T ss_pred CEEEEEEC--CEEEEEEeccCCCcEEEc
Confidence 45779999 599999999999999996
No 44
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=83.06 E-value=1.2 Score=34.47 Aligned_cols=31 Identities=13% Similarity=0.183 Sum_probs=25.5
Q ss_pred EEEEEeC---CCCceEEEEEeCCCCceeEeCCCC
Q 038667 62 YVNISIG---QPPVPQFTAMDTGSSLLWVHCYPC 92 (411)
Q Consensus 62 ~~~i~iG---tP~q~~~~i~DTGSs~~wv~~~~C 92 (411)
.+.|.|| +|+|.+..++|||.+++-+....+
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~l 45 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALF 45 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGS
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccC
Confidence 4566666 789999999999999999976643
No 45
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=82.00 E-value=1.8 Score=32.65 Aligned_cols=27 Identities=26% Similarity=0.143 Sum_probs=23.3
Q ss_pred EEEEEeCCCCceEEEEEeCCCCceeEeCC
Q 038667 62 YVNISIGQPPVPQFTAMDTGSSLLWVHCY 90 (411)
Q Consensus 62 ~~~i~iGtP~q~~~~i~DTGSs~~wv~~~ 90 (411)
++.+.|| +|.+.+++|||.+++-+...
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~~ 36 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAGI 36 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESSC
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcCc
Confidence 5679999 69999999999999999543
No 46
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=76.89 E-value=2.3 Score=33.16 Aligned_cols=24 Identities=21% Similarity=0.239 Sum_probs=21.3
Q ss_pred EEeCCCCceEEEEEeCCCCceeEeCC
Q 038667 65 ISIGQPPVPQFTAMDTGSSLLWVHCY 90 (411)
Q Consensus 65 i~iGtP~q~~~~i~DTGSs~~wv~~~ 90 (411)
|.|| +|.+.+++|||.+++-+.-.
T Consensus 18 ikI~--Gq~~eaLLDTGAD~TVi~~~ 41 (116)
T 2hah_A 18 IFVN--GYPIKFLLDTGADITVLNRR 41 (116)
T ss_dssp EEET--TEEEEEEECTTCSSCEEEGG
T ss_pred EEEC--CEEEEEEecCCCCcEEEccc
Confidence 9999 59999999999999998643
No 47
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=70.43 E-value=4.7 Score=31.25 Aligned_cols=28 Identities=7% Similarity=0.048 Sum_probs=24.1
Q ss_pred EEEEEeCCCCceEEEEEeCCCCceeEeCCC
Q 038667 62 YVNISIGQPPVPQFTAMDTGSSLLWVHCYP 91 (411)
Q Consensus 62 ~~~i~iGtP~q~~~~i~DTGSs~~wv~~~~ 91 (411)
.+.+.|| +|.+.+++|||.+++-+....
T Consensus 11 ~vti~I~--Gq~~eaLLDTGADdTVi~~~~ 38 (114)
T 3sqf_A 11 SLTLWLD--DKMFTGLINTGADVTIIKLED 38 (114)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEGGG
T ss_pred eEEEEEC--CEEEEEEEccCCCceEEeccc
Confidence 5678899 599999999999999997653
No 48
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=59.72 E-value=8.7 Score=30.60 Aligned_cols=30 Identities=17% Similarity=0.151 Sum_probs=24.7
Q ss_pred ceEEEEEEeCCCCceEEEEEeCCCCceeEeCC
Q 038667 59 SLFYVNISIGQPPVPQFTAMDTGSSLLWVHCY 90 (411)
Q Consensus 59 ~~Y~~~i~iGtP~q~~~~i~DTGSs~~wv~~~ 90 (411)
..-++.+.|+ +|.+.+++|||.+++-+...
T Consensus 21 ~RP~v~i~I~--G~~~~~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 21 PEPRITLKVG--GQPVTFLVDTGAQHSVLTQN 50 (132)
T ss_dssp CSSEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CCCEEEEEEC--CEEEEEEEeCCCCeEEEccc
Confidence 3456779999 59999999999999998543
No 49
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=54.68 E-value=13 Score=29.21 Aligned_cols=21 Identities=14% Similarity=0.151 Sum_probs=17.6
Q ss_pred CceEEEEEeCCCCceeEeCCC
Q 038667 71 PVPQFTAMDTGSSLLWVHCYP 91 (411)
Q Consensus 71 ~q~~~~i~DTGSs~~wv~~~~ 91 (411)
+|.+.+++|||.+++-+....
T Consensus 29 gq~~eaLLDTGAD~TVl~~~~ 49 (124)
T 2rsp_A 29 SVYITALLDSGADITIISEED 49 (124)
T ss_dssp EEEEEEEECTTCSSCEEETTT
T ss_pred CEEEEEEecCCCCcEEEeccc
Confidence 477899999999999997543
No 50
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=54.04 E-value=11 Score=32.29 Aligned_cols=26 Identities=27% Similarity=0.257 Sum_probs=23.0
Q ss_pred EEEEEEeCCCCceEEEEEeCCCCceeEe
Q 038667 61 FYVNISIGQPPVPQFTAMDTGSSLLWVH 88 (411)
Q Consensus 61 Y~~~i~iGtP~q~~~~i~DTGSs~~wv~ 88 (411)
-.+.|.|| +|.+.+++|||.+++-+.
T Consensus 9 P~vtv~I~--Gq~~e~LLDTGAD~TVl~ 34 (203)
T 3ka2_A 9 PLVTIRIG--GQLKEALLDTGADDTVIE 34 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEC
T ss_pred CeEEEEEC--CEEEEEEEecCCCceEEe
Confidence 46789999 599999999999999985
No 51
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=33.32 E-value=37 Score=29.02 Aligned_cols=27 Identities=26% Similarity=0.210 Sum_probs=23.2
Q ss_pred EEEEEEeCCCCceEEEEEeCCCCceeEeC
Q 038667 61 FYVNISIGQPPVPQFTAMDTGSSLLWVHC 89 (411)
Q Consensus 61 Y~~~i~iGtP~q~~~~i~DTGSs~~wv~~ 89 (411)
=.+.+.+| +|.+.+++|||.+++-+..
T Consensus 113 P~~~iki~--Gq~~e~LlDTGAD~TVl~~ 139 (203)
T 3ka2_A 113 PLVTIRIG--GQLKEALLDTGADDTVIEE 139 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred CcEEEEEC--CEEEeeeecccCCceeeec
Confidence 46789999 5999999999999999843
No 52
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=30.20 E-value=50 Score=28.72 Aligned_cols=32 Identities=22% Similarity=0.199 Sum_probs=23.3
Q ss_pred CceEEEE---EEeCCC-----CceEEEEEeCCCCceeEeC
Q 038667 58 NSLFYVN---ISIGQP-----PVPQFTAMDTGSSLLWVHC 89 (411)
Q Consensus 58 ~~~Y~~~---i~iGtP-----~q~~~~i~DTGSs~~wv~~ 89 (411)
.+.|.+. |.||.- .....++||||+++++++.
T Consensus 187 ~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~ 226 (239)
T 1b5f_A 187 QYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPT 226 (239)
T ss_dssp ETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECH
T ss_pred CCeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCH
Confidence 3456554 677752 3457899999999999975
No 53
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=26.70 E-value=58 Score=28.12 Aligned_cols=33 Identities=18% Similarity=0.193 Sum_probs=23.9
Q ss_pred CceEEE---EEEeCCC----CceEEEEEeCCCCceeEeCC
Q 038667 58 NSLFYV---NISIGQP----PVPQFTAMDTGSSLLWVHCY 90 (411)
Q Consensus 58 ~~~Y~~---~i~iGtP----~q~~~~i~DTGSs~~wv~~~ 90 (411)
.+.|.+ .|.||.- .....+++|||+++++++..
T Consensus 98 ~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~ 137 (241)
T 1lya_B 98 KAYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVD 137 (241)
T ss_dssp BTTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHH
T ss_pred ccEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHH
Confidence 345555 4668752 34578999999999999764
No 54
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=23.13 E-value=54 Score=25.27 Aligned_cols=31 Identities=26% Similarity=0.341 Sum_probs=25.3
Q ss_pred CceEEEeeEEEECCeEEecCCCcccccCCCCcEEEecccccccccH
Q 038667 245 GHYYITLEAISVDGRMLDINPNIFKRDDSGGGVMIDSGTDVTWLVK 290 (411)
Q Consensus 245 ~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~ 290 (411)
..|.=.+. |.|+|+.+ .+++|||.-.+.+..
T Consensus 10 ~l~~rP~v-ikI~Gq~~--------------eaLLDTGAD~TVi~~ 40 (116)
T 2hah_A 10 LEKRPEIL-IFVNGYPI--------------KFLLDTGADITVLNR 40 (116)
T ss_dssp SSSCCEEE-EEETTEEE--------------EEEECTTCSSCEEEG
T ss_pred cccCCCEE-EEECCEEE--------------EEEecCCCCcEEEcc
Confidence 35777777 99999863 599999999998875
No 55
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=20.96 E-value=65 Score=29.44 Aligned_cols=33 Identities=21% Similarity=0.243 Sum_probs=25.1
Q ss_pred CceEEEE---EEeCC---CCceEEEEEeCCCCceeEeCC
Q 038667 58 NSLFYVN---ISIGQ---PPVPQFTAMDTGSSLLWVHCY 90 (411)
Q Consensus 58 ~~~Y~~~---i~iGt---P~q~~~~i~DTGSs~~wv~~~ 90 (411)
.+.|.++ |.||. +.....++||||+++++++..
T Consensus 192 ~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lp~~ 230 (329)
T 3c9x_A 192 QGFWEFTASGYSVGGGKLNRNSIDGIADTGTTLLLLDDN 230 (329)
T ss_dssp TSSCEEEECCEEETTCCCCSCCEEEEECTTCCSEEECHH
T ss_pred CceEEEEEeeEEECCEeccCCCceEEEECCCCcEeCCHH
Confidence 4566665 56775 245789999999999999865
No 56
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=20.18 E-value=83 Score=28.80 Aligned_cols=16 Identities=31% Similarity=0.702 Sum_probs=14.2
Q ss_pred CcEEEecccccccccH
Q 038667 275 GGVMIDSGTDVTWLVK 290 (411)
Q Consensus 275 ~~~iiDSGTt~~~lp~ 290 (411)
..++||||++.+++|.
T Consensus 27 ~~v~~DTGSs~lWv~~ 42 (340)
T 1wkr_A 27 YSLLVDTGSSNTWLGA 42 (340)
T ss_dssp EEEEEETTCCCCEECS
T ss_pred EEEEEeCCChhheecC
Confidence 4699999999999985
Done!