AmiGO: BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters: Threshold: 0.001; Maximum number of alignments shown: 100; BLAST filter: on

Query Sequence

>038668
MDNACRSSLVESPMGPRSPPAAALDLYGKRRQMVKVQVLEREIGLLQEELKSVEDVQPAS
ICCKEVDDFVGAKPDPLVAMYDY

High Scoring Gene Products


Symbol, full name	Information	P value
BLAST match view associations BLAST with AGG3 AGG3 AGG3 AT5G20635	protein from Arabidopsis thaliana	6.0e-16
BLAST match view associations BLAST with AGG2 AGG2 AGG2 G-protein gamma subunit 2	protein from Arabidopsis thaliana	1.0e-06
BLAST match view associations BLAST with GG1 GG1 GG1 Ggamma-subunit 1	protein from Arabidopsis thaliana	0.00010
BLAST match view associations BLAST with OSJNBa0026E05.11-1 OSJNBa0026E05.11-1 OSJNBa0026E05.11-1 Putative uncharacterized protein OSJNBa0026E05.11-1	protein from Oryza sativa Japonica Group	0.00027

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  038668
        (83 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:504954807 - symbol:AGG3 "AT5G20635" species:37...   199  6.0e-16   1
TAIR|locus:1005471648 - symbol:AGG2 "G-protein gamma subu...   112  1.0e-06   1
TAIR|locus:2087398 - symbol:GG1 "Ggamma-subunit 1" specie...    93  0.00010   1
UNIPROTKB|Q6YXX9 - symbol:OSJNBa0026E05.11-1 "Os02g013780...    89  0.00027   1


>TAIR|locus:504954807 [details] [associations]
            symbol:AGG3 "AT5G20635" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0045095 "keratin filament"
            evidence=IEA] [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0009737 "response to abscisic acid stimulus" evidence=IMP]
            InterPro:IPR015898 Pfam:PF00631 PROSITE:PS50058 GO:GO:0005886
            GO:GO:0009737 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0007186
            GO:GO:0004871 EMBL:AF296832 GO:GO:0005834 EMBL:BT015160
            EMBL:AK221695 IPI:IPI00528687 RefSeq:NP_680175.2 UniGene:At.45640
            ProteinModelPortal:Q6AWT8 PaxDb:Q6AWT8 PRIDE:Q6AWT8
            EnsemblPlants:AT5G20635.1 GeneID:832186 KEGG:ath:AT5G20635
            TAIR:At5g20635 eggNOG:NOG305145 HOGENOM:HOG000141527 OMA:NICCCPR
            ProtClustDB:CLSN2918911 Genevestigator:Q6AWT8 Uniprot:Q6AWT8
        Length = 251

 Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
 Identities = 44/75 (58%), Positives = 52/75 (69%)

Query:     7 SSLVES---PMGPRSPPAAALDLYGKRRQMVKVQVLEREIGLLQEELKSVEDVQPASICC 63
             SSL  S   P  P+SPP    DLYGKRR+  +VQ+LEREIG L+ E+K +E VQPAS C 
Sbjct:    23 SSLAPSSLPPPRPKSPPEYP-DLYGKRREAARVQMLEREIGFLEGEIKFIEGVQPASRCI 81

Query:    64 KEVDDFVGAKPDPLV 78
             KEV DFV A  DPL+
Sbjct:    82 KEVSDFVVANSDPLI 96


>TAIR|locus:1005471648 [details] [associations]
            symbol:AGG2 "G-protein gamma subunit 2" species:3702
            "Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005834
            "heterotrimeric G-protein complex" evidence=ISS;IDA] [GO:0005886
            "plasma membrane" evidence=IDA] [GO:0018342 "protein prenylation"
            evidence=IMP] [GO:0018345 "protein palmitoylation" evidence=IMP]
            [GO:0009817 "defense response to fungus, incompatible interaction"
            evidence=IMP] [GO:0009845 "seed germination" evidence=IMP]
            [GO:0010540 "basipetal auxin transport" evidence=IMP] [GO:0048527
            "lateral root development" evidence=IMP] InterPro:IPR015898
            Pfam:PF00631 PROSITE:PS50058 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0007186 GO:GO:0010540 GO:GO:0048527
            GO:GO:0009845 EMBL:AP001300 GO:GO:0004871 GO:GO:0018345
            GO:GO:0005834 GO:GO:0018342 HOGENOM:HOG000238769 EMBL:AF347077
            EMBL:AF347078 EMBL:BT024657 EMBL:AK228306 IPI:IPI00529553
            RefSeq:NP_850746.1 UniGene:At.27127 UniGene:At.71143 IntAct:Q93V47
            STRING:Q93V47 PaxDb:Q93V47 PRIDE:Q93V47 EnsemblPlants:AT3G22942.1
            GeneID:825532 KEGG:ath:AT3G22942 TAIR:At3g22942 eggNOG:NOG292034
            InParanoid:Q93V47 OMA:SASCKEF PhylomeDB:Q93V47
            ProtClustDB:CLSN2680497 Genevestigator:Q93V47 Uniprot:Q93V47
        Length = 100

 Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 24/55 (43%), Positives = 35/55 (63%)

Query:    24 LDLYGKRRQMVKVQVLEREIGLLQEELKSVEDVQPASICCKEVDDFVGAKPDPLV 78
             +D  GK R   +++ LE+E   L+EEL+ +E +  AS  CKE  D V +KPDPL+
Sbjct:    17 VDTRGKHRIQAELKRLEQEARFLEEELEQLEKMDNASASCKEFLDSVDSKPDPLL 71


>TAIR|locus:2087398 [details] [associations]
            symbol:GG1 "Ggamma-subunit 1" species:3702 "Arabidopsis
            thaliana" [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005525 "GTP
            binding" evidence=ISS] [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0009817 "defense response to fungus, incompatible interaction"
            evidence=IMP] [GO:0009845 "seed germination" evidence=IMP]
            [GO:0010541 "acropetal auxin transport" evidence=IMP] [GO:0048527
            "lateral root development" evidence=IMP] InterPro:IPR015898
            Pfam:PF00631 PROSITE:PS50058 GO:GO:0005525 GO:GO:0005794
            EMBL:CP002686 GO:GO:0000139 GO:GO:0007186 GO:GO:0010541
            GO:GO:0048527 GO:GO:0009817 GO:GO:0009845 EMBL:AL163818
            GO:GO:0004871 GO:GO:0018345 GO:GO:0005834 GO:GO:0018342
            EMBL:AF283673 EMBL:AF283674 EMBL:AK175815 EMBL:BT024540
            IPI:IPI00533680 PIR:T49183 RefSeq:NP_567147.1 RefSeq:NP_850741.1
            UniGene:At.5190 IntAct:Q9FDX9 STRING:Q9FDX9 PRIDE:Q9FDX9
            EnsemblPlants:AT3G63420.1 EnsemblPlants:AT3G63420.2 GeneID:825517
            KEGG:ath:AT3G63420 TAIR:At3g63420 eggNOG:NOG271245
            HOGENOM:HOG000238769 OMA:GGKHRIL ProtClustDB:CLSN2689355
            Genevestigator:Q9FDX9 Uniprot:Q9FDX9
        Length = 98

 Score = 93 (37.8 bits), Expect = 0.00010, P = 0.00010
 Identities = 18/53 (33%), Positives = 32/53 (60%)

Query:    28 GKRRQMVKVQVLEREIGLLQEELKSVEDVQPASICCKEVDDFVGAKPDPLVAM 80
             GK R + ++  +E+E+  L++ELK VE+    S  C+E+   +   PDPL+ +
Sbjct:    19 GKHRILAELARVEQEVAFLEKELKEVENTDIVSTVCEELLSVIEKGPDPLLPL 71


>UNIPROTKB|Q6YXX9 [details] [associations]
            symbol:OSJNBa0026E05.11-1 "Os02g0137800 protein"
            species:39947 "Oryza sativa Japonica Group" [GO:0005515 "protein
            binding" evidence=IPI] InterPro:IPR015898 Pfam:PF00631
            GO:GO:0007186 GO:GO:0004871 EMBL:AP008208 GO:GO:0005834
            EMBL:AP005647 RefSeq:NP_001045833.1 UniGene:Os.8551 IntAct:Q6YXX9
            EnsemblPlants:LOC_Os02g04520.1 GeneID:4328241 KEGG:osa:4328241
            OMA:KWWASKG ProtClustDB:CLSN2692434 Uniprot:Q6YXX9
        Length = 150

 Score = 89 (36.4 bits), Expect = 0.00027, P = 0.00027
 Identities = 19/51 (37%), Positives = 29/51 (56%)

Query:    28 GKRRQMVKVQVLEREIGLLQEELKSVEDVQPASICCKEVDDFVGAKPDPLV 78
             GK R    +  L++E+  LQ+EL  +E ++PAS  C+ V      K DPL+
Sbjct:    65 GKHRLSAAIARLDQELQSLQDELNELETMEPASAACQGVITSTEGKSDPLL 115


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.135   0.392    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       83        83   0.00091  102 3  11 22  0.45    29
                                                     29  0.44    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  479 (51 KB)
  Total size of DFA:  90 KB (2068 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.14u 0.11s 12.25t   Elapsed:  00:00:01
  Total cpu time:  12.14u 0.11s 12.25t   Elapsed:  00:00:01
  Start:  Mon May 20 20:23:31 2013   End:  Mon May 20 20:23:32 2013

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the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data