BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038670
(259 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84WF5|VAMPL_ARATH Probable VAMP-like protein At1g33475 OS=Arabidopsis thaliana
GN=At1g33475 PE=2 SV=1
Length = 255
Score = 186 bits (473), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/253 (44%), Positives = 149/253 (58%), Gaps = 29/253 (11%)
Query: 1 MASIQNTVHYCSVSRGNRSLYVYS-GGDH-EIENLATLCLERTPPFHKWYFETIGKRIYG 58
M SIQNTVHYC VSR N+ +Y Y+ GDH E+LA LCLE+TPPFHKWYFET GK+ +G
Sbjct: 1 MGSIQNTVHYCCVSRDNQIMYAYNNAGDHRNNESLAALCLEKTPPFHKWYFETRGKKTFG 60
Query: 59 FLIEDGYAYFMIADEGLGNRGALQFLEHLRDEFKKVAKKGSR-GSFSGMNAIGVQEQLVP 117
FL++D + YF I D+ L FLE LRDE K+ KK SR ++ VQ+Q+V
Sbjct: 61 FLMKDDFVYFAIVDDVFKKSSVLDFLEKLRDELKEANKKNSRGSFSGSISFSNVQDQIV- 119
Query: 118 VIRRLITSLENVSQSRDDWKAETPLSDRVGLSPSPNNANGQTEVATSTKAPLLGKPGKQE 177
RRLI SLE PLS SPS + A + A+++KAPLLG+ KQ+
Sbjct: 120 --RRLIASLEFDHTC-------LPLS-----SPSIDGA--EQSYASNSKAPLLGRSNKQD 163
Query: 178 KKKAKDHVIAMRDVELEEHRKSTDRVKFDSAALESNSQNGAGSSISLQKDLGSMRIRSSP 237
KKK +DH ++R +E+EEHRKS DR SN+ + + + + + G
Sbjct: 164 KKKGRDHAHSLRGIEIEEHRKSNDRGNVTEC---SNASSESATYVPRRGRSG------GS 214
Query: 238 QCIQKKWWRQVGL 250
Q I++KW RQV +
Sbjct: 215 QSIERKWRRQVKI 227
>sp|O23429|VA724_ARATH Vesicle-associated membrane protein 724 OS=Arabidopsis thaliana
GN=VAMP724 PE=2 SV=2
Length = 222
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 5 QNTVHYCSVSRGNRSLYVYSGGDHEIENLATLCLERTPPFHKWYFE-TIGKRIYGFLIED 63
Q + Y V+RG L Y+ ++A CL++ P F + FL+ED
Sbjct: 3 QESFIYSFVARGTMILAEYTEFTGNFPSIAAQCLQKLPSSSNSKFTYNCDHHTFNFLVED 62
Query: 64 GYAYFMIADEGLGNRGALQFLEHLRDEFKK 93
GYAY ++A + L + ++ FLE ++ +FKK
Sbjct: 63 GYAYCVVAKDSLSKQISIAFLERVKADFKK 92
>sp|Q9ZTW3|VA721_ARATH Vesicle-associated membrane protein 721 OS=Arabidopsis thaliana
GN=VAMP721 PE=1 SV=1
Length = 219
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 46/89 (51%)
Query: 5 QNTVHYCSVSRGNRSLYVYSGGDHEIENLATLCLERTPPFHKWYFETIGKRIYGFLIEDG 64
Q ++ Y V+RG L ++ ++A CL++ P + + + +L+EDG
Sbjct: 3 QQSLIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVEDG 62
Query: 65 YAYFMIADEGLGNRGALQFLEHLRDEFKK 93
+ Y ++A + G + + FLE ++++F K
Sbjct: 63 FTYCVVAVDSAGRQIPMSFLERVKEDFNK 91
>sp|Q9M376|VA727_ARATH Vesicle-associated membrane protein 727 OS=Arabidopsis thaliana
GN=VAMP727 PE=2 SV=1
Length = 240
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 44/89 (49%)
Query: 5 QNTVHYCSVSRGNRSLYVYSGGDHEIENLATLCLERTPPFHKWYFETIGKRIYGFLIEDG 64
Q + Y V++G L ++ +A CL++ P Y + + FL+++G
Sbjct: 3 QKGLIYSFVAKGTVVLAEHTPYSGNFSTIAVQCLQKLPTNSSKYTYSCDGHTFNFLVDNG 62
Query: 65 YAYFMIADEGLGNRGALQFLEHLRDEFKK 93
+ + ++ADE G FLE ++++FKK
Sbjct: 63 FVFLVVADESTGRSVPFVFLERVKEDFKK 91
>sp|O48850|VA725_ARATH Vesicle-associated membrane protein 725 OS=Arabidopsis thaliana
GN=VAMP725 PE=2 SV=2
Length = 285
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 45/89 (50%)
Query: 5 QNTVHYCSVSRGNRSLYVYSGGDHEIENLATLCLERTPPFHKWYFETIGKRIYGFLIEDG 64
Q + Y V+RG L Y+ +A CL++ P + + + +L+E+G
Sbjct: 68 QQNLIYSFVARGTVILVEYTEFKGNFTAVAAQCLQKLPSSNNKFTYNCDGHTFNYLVENG 127
Query: 65 YAYFMIADEGLGNRGALQFLEHLRDEFKK 93
+ Y ++A E +G + + FLE ++++F K
Sbjct: 128 FTYCVVAVESVGRQIPMAFLERVKEDFNK 156
>sp|P47192|VA722_ARATH Vesicle-associated membrane protein 722 OS=Arabidopsis thaliana
GN=VAMP722 PE=2 SV=2
Length = 221
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 46/89 (51%)
Query: 5 QNTVHYCSVSRGNRSLYVYSGGDHEIENLATLCLERTPPFHKWYFETIGKRIYGFLIEDG 64
Q ++ Y V+RG L ++ ++A CL++ P + + + +L+E+G
Sbjct: 3 QQSLIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVENG 62
Query: 65 YAYFMIADEGLGNRGALQFLEHLRDEFKK 93
+ Y ++A + G + + FLE ++++F K
Sbjct: 63 FTYCVVAVDSAGRQIPMAFLERVKEDFNK 91
>sp|Q86AQ7|VAM7B_DICDI Vesicle-associated membrane protein 7B OS=Dictyostelium discoideum
GN=vamp7B PE=3 SV=1
Length = 260
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 1/102 (0%)
Query: 8 VHYCSVSRGNRSLYVYSGGDHEIENLATLCLERTPPFHKWYFETIGKRIYGFLIEDGYAY 67
+ Y V+RG+ L ++ + + L+ PP K I+ +L+ D Y
Sbjct: 3 IIYSLVARGSSVLAEFTSTNGNFVTITRRILDLIPPNDTKMSYVYEKYIFHYLVSDTLTY 62
Query: 68 FMIADEGLGNRGALQFLEHLRDEFKKV-AKKGSRGSFSGMNA 108
+ADE G R FL+ +++ FK + KG GMN+
Sbjct: 63 LCMADEEFGRRIPFTFLDDVKNRFKSMYGDKGKTAIAYGMNS 104
>sp|Q9MAS5|VA726_ARATH Putative vesicle-associated membrane protein 726 OS=Arabidopsis
thaliana GN=VAMP726 PE=3 SV=2
Length = 220
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 44/89 (49%)
Query: 5 QNTVHYCSVSRGNRSLYVYSGGDHEIENLATLCLERTPPFHKWYFETIGKRIYGFLIEDG 64
Q ++ Y V+RG L Y+ ++A CL++ P + + + +L ++G
Sbjct: 3 QQSLIYSFVARGTVILAEYTEFKGNFTSVAAQCLQKLPSSNNKFTYNCDGHTFNYLADNG 62
Query: 65 YAYFMIADEGLGNRGALQFLEHLRDEFKK 93
+ Y ++ E G + + FLE ++++F K
Sbjct: 63 FTYCVVVIESAGRQIPMAFLERVKEDFNK 91
>sp|Q5YTE7|RUVA_NOCFA Holliday junction ATP-dependent DNA helicase RuvA OS=Nocardia
farcinica (strain IFM 10152) GN=ruvA PE=3 SV=1
Length = 201
Score = 38.9 bits (89), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 74 GLGNRGALQFLEHLRDEFKKV-AKKGSRGSFSGMNAIGVQEQLVPVIRRLITSLENVSQS 132
G+G RGA + + LRD+ V + G GS + A V+EQ+V + L L+ Q+
Sbjct: 114 GIGKRGAERMVVELRDKVNLVPVQAGPPGSTPAVAATPVREQVVEALTGLGFPLKQAEQA 173
Query: 133 RDDWKAETPLSD 144
D AE P +D
Sbjct: 174 LDTVLAEQPAAD 185
>sp|Q8VY69|VA723_ARATH Vesicle-associated membrane protein 723 OS=Arabidopsis thaliana
GN=VAMP723 PE=2 SV=1
Length = 217
Score = 37.4 bits (85), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 42/89 (47%)
Query: 5 QNTVHYCSVSRGNRSLYVYSGGDHEIENLATLCLERTPPFHKWYFETIGKRIYGFLIEDG 64
Q ++ Y ++RG L ++ ++A LE P + + + L+E+G
Sbjct: 3 QQSLFYSFIARGTVILVEFTDFKGNFTSVAAQYLENLPSSNNKFTYNCDGHTFNDLVENG 62
Query: 65 YAYFMIADEGLGNRGALQFLEHLRDEFKK 93
+ Y ++A + G + FLE ++++F K
Sbjct: 63 FTYCVVAVDSAGREIPMAFLERVKEDFYK 91
>sp|P75278|Y508_MYCPN Uncharacterized protein MPN_508 OS=Mycoplasma pneumoniae (strain
ATCC 29342 / M129) GN=MPN_508 PE=1 SV=1
Length = 509
Score = 34.3 bits (77), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 71/163 (43%), Gaps = 38/163 (23%)
Query: 53 GKRIYGFLIEDGYAYFMIADEGLGNRGALQF-----------LEHLRDEFKKVAKKGSRG 101
GK Y F I+ +A EG G+ LQF L L+D F + K
Sbjct: 84 GKVCYSFSIKMDFATIY---EGDGSTIDLQFALNASTTNFANLTDLQDSFWQSGKD---- 136
Query: 102 SFSGMNAIGVQEQLVPVIRRLITSLENVSQSRDDWKAETPLSD-----RVGLSPSPNNAN 156
+ Q P + +LI++ N + A+T L D +V L+ S N
Sbjct: 137 -------LNTQLFWKPSVHKLISNGTNDLTTL----AQTALGDSLFDTKVNLTESVIEIN 185
Query: 157 GQTEVATSTKAPLLGKPGKQEKKKA-KDHVIAMRDVELEEHRK 198
QT+VAT + +L KQE++KA +HV +R +LEE RK
Sbjct: 186 NQTDVATKFREKVLNS-FKQEREKAHAEHVEKLR--KLEEERK 225
>sp|Q13018|PLA2R_HUMAN Secretory phospholipase A2 receptor OS=Homo sapiens GN=PLA2R1 PE=1
SV=2
Length = 1463
Score = 34.3 bits (77), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
Query: 29 EIENLATLC--LERTPPFH---KWYFETIGKRIYGFLIE 62
E++ LC L P FH KWYFE GK YGF+ E
Sbjct: 1059 EVQKHIPLCALLSSNPNFHFTGKWYFEDCGKEGYGFVCE 1097
>sp|Q9A3G7|RUVA_CAUCR Holliday junction ATP-dependent DNA helicase RuvA OS=Caulobacter
crescentus (strain ATCC 19089 / CB15) GN=ruvA PE=3 SV=1
Length = 205
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 21 YVYSGGDHEIENLATLCLERTPPFHKWYFETIGKRIYGFLI-EDGYAYFMI-ADEGLGNR 78
Y+ G ++ L L E + E+ G R+YGFL ED A+ ++ A +G+G +
Sbjct: 26 YLVRCGHRTLQRLPALGEETLLHIESQWSESAGLRLYGFLTREDRRAFVLLQAIQGVGPK 85
Query: 79 GALQFLEHLRD-EFKKVAKKGSRGSFSGMNAIGVQEQLVPVIRRLITSLEN 128
A+ L+ L E + + + N +G + L R++T L++
Sbjct: 86 AAMAVLDVLSPAELASAVAREDKAAVGRANGVGPKLAL-----RIVTELKD 131
>sp|B8H455|RUVA_CAUCN Holliday junction ATP-dependent DNA helicase RuvA OS=Caulobacter
crescentus (strain NA1000 / CB15N) GN=ruvA PE=3 SV=1
Length = 205
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 21 YVYSGGDHEIENLATLCLERTPPFHKWYFETIGKRIYGFLI-EDGYAYFMI-ADEGLGNR 78
Y+ G ++ L L E + E+ G R+YGFL ED A+ ++ A +G+G +
Sbjct: 26 YLVRCGHRTLQRLPALGEETLLHIESQWSESAGLRLYGFLTREDRRAFVLLQAIQGVGPK 85
Query: 79 GALQFLEHLRD-EFKKVAKKGSRGSFSGMNAIGVQEQLVPVIRRLITSLEN 128
A+ L+ L E + + + N +G + L R++T L++
Sbjct: 86 AAMAVLDVLSPAELASAVAREDKAAVGRANGVGPKLAL-----RIVTELKD 131
>sp|Q94AU2|SEC22_ARATH 25.3 kDa vesicle transport protein OS=Arabidopsis thaliana
GN=SEC22 PE=2 SV=1
Length = 218
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 53 GKRIYGFLIEDGYAYFMIADEGLGNRGALQFLEHLRDEFKKV 94
G ++ ++IE Y + D + A Q+LE L++EF++V
Sbjct: 58 GPYVFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERV 99
>sp|Q1QZZ7|HSLU_CHRSD ATP-dependent protease ATPase subunit HslU OS=Chromohalobacter
salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB
13768) GN=hslU PE=3 SV=1
Length = 441
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 60 LIEDGYAYFMIADEGLGNRGALQFLEH----LRDEFKKVAKKGSRGSFSGMNAIGVQEQL 115
L+ D A ++ +E + +R A++ +E DE KVAK+G GS ++ GVQ L
Sbjct: 222 LLHDEEAAKLVNEEQIKHR-AIEAVEQNGIVFLDEIDKVAKRGDSGSGGDVSREGVQRDL 280
Query: 116 VPVI 119
+P+I
Sbjct: 281 LPLI 284
>sp|Q5R880|PLA2R_PONAB Secretory phospholipase A2 receptor OS=Pongo abelii GN=PLA2R1 PE=2
SV=2
Length = 1464
Score = 32.7 bits (73), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
Query: 29 EIENLATLC--LERTPPFH---KWYFETIGKRIYGFLIE 62
+++ LC L P FH KWYFE GK YGF+ E
Sbjct: 1061 DVQKHIPLCALLSSNPNFHFTGKWYFEDCGKEGYGFVCE 1099
>sp|P49260|PLA2R_RABIT Secretory phospholipase A2 receptor OS=Oryctolagus cuniculus
GN=PLA2R1 PE=1 SV=1
Length = 1458
Score = 32.7 bits (73), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 18/32 (56%), Gaps = 5/32 (15%)
Query: 36 LC--LERTPPFH---KWYFETIGKRIYGFLIE 62
LC L P FH KWYFE GK YGF+ E
Sbjct: 1064 LCALLSSNPNFHFTGKWYFEDCGKEGYGFVCE 1095
>sp|Q5QYU4|RUVA_IDILO Holliday junction ATP-dependent DNA helicase RuvA OS=Idiomarina
loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR)
GN=ruvA PE=3 SV=1
Length = 205
Score = 31.6 bits (70), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 69/186 (37%), Gaps = 23/186 (12%)
Query: 25 GGDHEIENLATLCLERTPP-------FHKWYFETIGKRIYGFLIEDGYAYF--MIADEGL 75
G +EI+ L C + PP + + +YGF+ + F ++ +G+
Sbjct: 23 GIGYEIQ-LPMTCFYQLPPVGETIKLITHFVVREDAQLLYGFISASERSLFRLLLKTQGV 81
Query: 76 GNRGALQFLEHLR-DEFKKVAKKGSRGSFSGMNAIGVQEQLVPVIRRLITSLENVSQSRD 134
G + AL L + DEF + + +G + RL+ + +
Sbjct: 82 GPKLALAILSGMSADEFVMAVNQNDVTRLVKLPGVGKK-----TAERLVIEMRD---RLK 133
Query: 135 DWKAETPLSDRVGLSPSPNNANGQTEVATSTKAPLLGKPGKQEKKKAKDHVIAMRDVELE 194
DW+ TP +DR L +A A + L G +E + K A++ V
Sbjct: 134 DWQPSTPFTDRAPLDSQGMDAREHPADARTDAISALQSLGYKENQAEK----ALQKVYSA 189
Query: 195 EHRKST 200
EH T
Sbjct: 190 EHNSET 195
>sp|Q62028|PLA2R_MOUSE Secretory phospholipase A2 receptor OS=Mus musculus GN=Pla2r1 PE=1
SV=1
Length = 1487
Score = 31.6 bits (70), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 5/39 (12%)
Query: 29 EIENLATLC--LERTPPFH---KWYFETIGKRIYGFLIE 62
E + LC + P FH KWYF+ GK YGF+ E
Sbjct: 1058 EFQKHIPLCALMSSNPNFHFTGKWYFDDCGKEGYGFVCE 1096
>sp|A3CT03|RS3_METMJ 30S ribosomal protein S3 OS=Methanoculleus marisnigri (strain ATCC
35101 / DSM 1498 / JR1) GN=rps3 PE=3 SV=1
Length = 234
Score = 31.2 bits (69), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 7/108 (6%)
Query: 47 WYFETIGKRIYGFLIEDGY--AYFMIADEGLGNRGALQ-----FLEHLRDEFKKVAKKGS 99
WYF G ++E G ++A + G+R Q +++H + + + +KG
Sbjct: 107 WYFRKAGSSTIRRIMESGALGCEVIVAGKLTGSRSRTQKFTEGYIKHCGEPSETIVEKGY 166
Query: 100 RGSFSGMNAIGVQEQLVPVIRRLITSLENVSQSRDDWKAETPLSDRVG 147
+ + IGVQ ++VP RL + + + AE + VG
Sbjct: 167 ALAIKKLGTIGVQVKIVPPDARLPDAFDVLEPEPKKAPAEPIEPEEVG 214
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,720,061
Number of Sequences: 539616
Number of extensions: 4023028
Number of successful extensions: 11890
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 11862
Number of HSP's gapped (non-prelim): 61
length of query: 259
length of database: 191,569,459
effective HSP length: 115
effective length of query: 144
effective length of database: 129,513,619
effective search space: 18649961136
effective search space used: 18649961136
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)