BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038671
(707 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 150/289 (51%), Gaps = 17/289 (5%)
Query: 430 EIIRVTNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTL 489
E+ +++F +++ +G+GG G VYK L G +VAVK+ + +F EV+ +
Sbjct: 32 ELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEE--RXQGGELQFQTEVEMI 89
Query: 490 TGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD-LGWTKRMNVIKGVV 548
+ HRN+++ GFC +VY Y+ GS+A L ++ L W KR + G
Sbjct: 90 SMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSA 149
Query: 549 DALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLK-PDSSNWAELAGTYGY 607
L+Y+H+ C P I+HRD+ + N+LLD E EA V DFG AK + D + GT G+
Sbjct: 150 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGH 209
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNL---------EIAL 658
+APE T K +EK DV+ +GV+ LE+I G+ D L E L
Sbjct: 210 IAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 269
Query: 659 NEMLDPRLPTPSHNVQDKLI-SIMEVAISCLDESPESRPTIQKVSQLLK 706
++D L N +D+ + +++VA+ C SP RP + +V ++L+
Sbjct: 270 EALVDVDL---QGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 149/289 (51%), Gaps = 17/289 (5%)
Query: 430 EIIRVTNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTL 489
E+ +++F +++ +G+GG G VYK L G +VAVK+ + +F EV+ +
Sbjct: 24 ELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEE--RTQGGELQFQTEVEMI 81
Query: 490 TGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD-LGWTKRMNVIKGVV 548
+ HRN+++ GFC +VY Y+ GS+A L ++ L W KR + G
Sbjct: 82 SMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSA 141
Query: 549 DALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLK-PDSSNWAELAGTYGY 607
L+Y+H+ C P I+HRD+ + N+LLD E EA V DFG AK + D + G G+
Sbjct: 142 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGH 201
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNL---------EIAL 658
+APE T K +EK DV+ +GV+ LE+I G+ D L E L
Sbjct: 202 IAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 261
Query: 659 NEMLDPRLPTPSHNVQDKLI-SIMEVAISCLDESPESRPTIQKVSQLLK 706
++D L N +D+ + +++VA+ C SP RP + +V ++L+
Sbjct: 262 EALVDVDL---QGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/365 (32%), Positives = 170/365 (46%), Gaps = 9/365 (2%)
Query: 8 LYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAI 67
LYL NN F+G IP + L L LS N L G+IP SLG+L+++ L L+ N L G I
Sbjct: 396 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEI 455
Query: 68 PKEYGNLVKLTLLTLENNQLRGPIPN-LRNLTSLVRVRLNQNHLTGNISESFGIHPNLAF 126
P+E + L L L+ N L G IP+ L N T+L + L+ N LTG I + G NLA
Sbjct: 456 PQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAI 515
Query: 127 IDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGE- 185
+ LS+N F G I ++ G C L LD ++N G++PA + S +++N I G+
Sbjct: 516 LKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSG----KIAANFIAGKR 571
Query: 186 -MPXXXXXXXXXXXXXXXXXXXCGQLSLELGSLTQXXXXXXXXXXXXXXIPKSLGNLVKL 244
+ G S +L L+ + N +
Sbjct: 572 YVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSM 631
Query: 245 HYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSG 304
+L++S N IP E+ + +L L+L HN + +P ++ +++ L L+LS N L G
Sbjct: 632 MFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDG 691
Query: 305 FIPSCFEELHGLSYIDISYNELHGSIPNSTAFRDAPMEALQGNKGLCGDIKGFPSCKASK 364
IP L L+ ID+S N L G IP F P N GLCG P C S
Sbjct: 692 RIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCG--YPLPRCDPSN 749
Query: 365 SHKQA 369
+ A
Sbjct: 750 ADGYA 754
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 156/356 (43%), Gaps = 33/356 (9%)
Query: 5 LAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALS 64
L L + N SG + ++ R +L L++S N IP LG+ + + L + N LS
Sbjct: 177 LKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLS 233
Query: 65 GAIPKEYGNLVKLTLLTLENNQLRGPIPNLRNLTSLVRVRLNQNHLTGNISESF-GIHPN 123
G + +L LL + +NQ GPIP L L SL + L +N TG I + G
Sbjct: 234 GDFSRAISTCTELKLLNISSNQFVGPIPPLP-LKSLQYLSLAENKFTGEIPDFLSGACDT 292
Query: 124 LAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGSMPAE-IIHSSQLKVLDLSSNHI 182
L +DLS N+FYG + +G C L +L SSNN +G +P + ++ LKVLDLS N
Sbjct: 293 LTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEF 352
Query: 183 VGEMPXXXXXXXXXXXXXXXXXXX---------------------------CGQLSLELG 215
GE+P G++ L
Sbjct: 353 SGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLS 412
Query: 216 SLTQXXXXXXXXXXXXXXIPKSLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSH 275
+ ++ IP SLG+L KL L L N +IP EL + L L L
Sbjct: 413 NCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDF 472
Query: 276 NFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDISYNELHGSIP 331
N L E+PS + N +L ++LS+N L+G IP L L+ + +S N G+IP
Sbjct: 473 NDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIP 528
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 155/358 (43%), Gaps = 33/358 (9%)
Query: 4 NLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNAL 63
NL FL + +N+FS IP +G +L L++SGNKL G ++ T++ L + N
Sbjct: 198 NLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQF 256
Query: 64 SGAIPKEYGNLVKLTLLTLENNQLRGPIPNLRN--LTSLVRVRLNQNHLTGNISESFGIH 121
G IP L L L+L N+ G IP+ + +L + L+ NH G + FG
Sbjct: 257 VGPIPPLP--LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSC 314
Query: 122 P-------------------------NLAFIDLSHNYFYGEISSDWGR-CPKLGTLDFSS 155
L +DLS N F GE+ L TLD SS
Sbjct: 315 SLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSS 374
Query: 156 NNITGSMPAEIIHSSQ--LKVLDLSSNHIVGEMPXXXXXXXXXXXXXXXXXXXCGQLSLE 213
NN +G + + + + L+ L L +N G++P G +
Sbjct: 375 NNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSS 434
Query: 214 LGSLTQXXXXXXXXXXXXXXIPKSLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDL 273
LGSL++ IP+ L + L L L N +IP L +L+ + L
Sbjct: 435 LGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISL 494
Query: 274 SHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDISYNELHGSIP 331
S+N L E+P I +++L L LS+N+ SG IP+ + L ++D++ N +G+IP
Sbjct: 495 SNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 552
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 148/319 (46%), Gaps = 8/319 (2%)
Query: 3 SNLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSL-GNLTQITFLTLFDN 61
+ L L + +N F G IP LKSL L L+ NK G IP L G +T L L N
Sbjct: 244 TELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGN 301
Query: 62 ALSGAIPKEYGNLVKLTLLTLENNQLRGPIP--NLRNLTSLVRVRLNQNHLTGNISESF- 118
GA+P +G+ L L L +N G +P L + L + L+ N +G + ES
Sbjct: 302 HFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLT 361
Query: 119 GIHPNLAFIDLSHNYFYGEISSDWGRCPK--LGTLDFSSNNITGSMPAEIIHSSQLKVLD 176
+ +L +DLS N F G I + + PK L L +N TG +P + + S+L L
Sbjct: 362 NLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLH 421
Query: 177 LSSNHIVGEMPXXXXXXXXXXXXXXXXXXXCGQLSLELGSLTQXXXXXXXXXXXXXXIPK 236
LS N++ G +P G++ EL + IP
Sbjct: 422 LSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPS 481
Query: 237 SLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLN 296
L N L++++LSNN+ +IP + +L +L+ L LS+N +P+++ + +SL L+
Sbjct: 482 GLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLD 541
Query: 297 LSHNNLSGFIPSCFEELHG 315
L+ N +G IP+ + G
Sbjct: 542 LNTNLFNGTIPAAMFKQSG 560
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 107/210 (50%), Gaps = 23/210 (10%)
Query: 1 NLSNLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFD 60
N +NL ++ L NN +G IP IGRL++L+ L+LS N G+IP LG+ + +L L
Sbjct: 485 NCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNT 544
Query: 61 NALSGAIP----KEYGNLVKLTL-----LTLENNQLRGPIPNLRNLTSLVRVRLNQ-NHL 110
N +G IP K+ G + + + ++N+ ++ NL +R Q N L
Sbjct: 545 NLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRL 604
Query: 111 T-------------GNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNN 157
+ G+ S +F + ++ F+D+S+N G I + G P L L+ N+
Sbjct: 605 STRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHND 664
Query: 158 ITGSMPAEIIHSSQLKVLDLSSNHIVGEMP 187
I+GS+P E+ L +LDLSSN + G +P
Sbjct: 665 ISGSIPDEVGDLRGLNILDLSSNKLDGRIP 694
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 127/305 (41%), Gaps = 47/305 (15%)
Query: 2 LSNLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDN 61
LS L L L+ N G IP E+ +K+L L L N L G IP L N T + +++L +N
Sbjct: 438 LSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNN 497
Query: 62 ALSGAIPKEYGNLVKLTLLTLENNQLRGPIP-NLRNLTSLVRVRLNQNHLTGNI-----S 115
L+G IPK G L L +L L NN G IP L + SL+ + LN N G I
Sbjct: 498 RLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFK 557
Query: 116 ESFGIHPNL----AFIDLSHN-------------YFYGEISSDWGRCPKLGTLDFSSNNI 158
+S I N ++ + ++ F G S R + +S
Sbjct: 558 QSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVY 617
Query: 159 TGSMPAEIIHSSQLKVLDLSSNHIVGEMPXXXXXXXXXXXXXXXXXXXCGQLSLELGSLT 218
G ++ + LD+S N + G +P E+GS+
Sbjct: 618 GGHTSPTFDNNGSMMFLDMSYNMLSGYIPK------------------------EIGSMP 653
Query: 219 QXXXXXXXXXXXXXXIPKSLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFL 278
IP +G+L L+ L+LS+N+ +IP + L L+E+DLS+N L
Sbjct: 654 YLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNL 713
Query: 279 GEEMP 283
+P
Sbjct: 714 SGPIP 718
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 50/94 (53%)
Query: 1 NLSNLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFD 60
N ++ FL + N SG IP EIG + L L L N + GSIP +G+L + L L
Sbjct: 627 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSS 686
Query: 61 NALSGAIPKEYGNLVKLTLLTLENNQLRGPIPNL 94
N L G IP+ L LT + L NN L GPIP +
Sbjct: 687 NKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM 720
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/365 (32%), Positives = 170/365 (46%), Gaps = 9/365 (2%)
Query: 8 LYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAI 67
LYL NN F+G IP + L L LS N L G+IP SLG+L+++ L L+ N L G I
Sbjct: 399 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEI 458
Query: 68 PKEYGNLVKLTLLTLENNQLRGPIPN-LRNLTSLVRVRLNQNHLTGNISESFGIHPNLAF 126
P+E + L L L+ N L G IP+ L N T+L + L+ N LTG I + G NLA
Sbjct: 459 PQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAI 518
Query: 127 IDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGE- 185
+ LS+N F G I ++ G C L LD ++N G++PA + S +++N I G+
Sbjct: 519 LKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSG----KIAANFIAGKR 574
Query: 186 -MPXXXXXXXXXXXXXXXXXXXCGQLSLELGSLTQXXXXXXXXXXXXXXIPKSLGNLVKL 244
+ G S +L L+ + N +
Sbjct: 575 YVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSM 634
Query: 245 HYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSG 304
+L++S N IP E+ + +L L+L HN + +P ++ +++ L L+LS N L G
Sbjct: 635 MFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDG 694
Query: 305 FIPSCFEELHGLSYIDISYNELHGSIPNSTAFRDAPMEALQGNKGLCGDIKGFPSCKASK 364
IP L L+ ID+S N L G IP F P N GLCG P C S
Sbjct: 695 RIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCG--YPLPRCDPSN 752
Query: 365 SHKQA 369
+ A
Sbjct: 753 ADGYA 757
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 156/356 (43%), Gaps = 33/356 (9%)
Query: 5 LAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALS 64
L L + N SG + ++ R +L L++S N IP LG+ + + L + N LS
Sbjct: 180 LKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLS 236
Query: 65 GAIPKEYGNLVKLTLLTLENNQLRGPIPNLRNLTSLVRVRLNQNHLTGNISESF-GIHPN 123
G + +L LL + +NQ GPIP L L SL + L +N TG I + G
Sbjct: 237 GDFSRAISTCTELKLLNISSNQFVGPIPPLP-LKSLQYLSLAENKFTGEIPDFLSGACDT 295
Query: 124 LAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGSMPAE-IIHSSQLKVLDLSSNHI 182
L +DLS N+FYG + +G C L +L SSNN +G +P + ++ LKVLDLS N
Sbjct: 296 LTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEF 355
Query: 183 VGEMPXXXXXXXXXXXXXXXXXXX---------------------------CGQLSLELG 215
GE+P G++ L
Sbjct: 356 SGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLS 415
Query: 216 SLTQXXXXXXXXXXXXXXIPKSLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSH 275
+ ++ IP SLG+L KL L L N +IP EL + L L L
Sbjct: 416 NCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDF 475
Query: 276 NFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDISYNELHGSIP 331
N L E+PS + N +L ++LS+N L+G IP L L+ + +S N G+IP
Sbjct: 476 NDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIP 531
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 155/358 (43%), Gaps = 33/358 (9%)
Query: 4 NLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNAL 63
NL FL + +N+FS IP +G +L L++SGNKL G ++ T++ L + N
Sbjct: 201 NLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQF 259
Query: 64 SGAIPKEYGNLVKLTLLTLENNQLRGPIPNLRN--LTSLVRVRLNQNHLTGNISESFGIH 121
G IP L L L+L N+ G IP+ + +L + L+ NH G + FG
Sbjct: 260 VGPIPPLP--LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSC 317
Query: 122 P-------------------------NLAFIDLSHNYFYGEISSDWGR-CPKLGTLDFSS 155
L +DLS N F GE+ L TLD SS
Sbjct: 318 SLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSS 377
Query: 156 NNITGSMPAEIIHSSQ--LKVLDLSSNHIVGEMPXXXXXXXXXXXXXXXXXXXCGQLSLE 213
NN +G + + + + L+ L L +N G++P G +
Sbjct: 378 NNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSS 437
Query: 214 LGSLTQXXXXXXXXXXXXXXIPKSLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDL 273
LGSL++ IP+ L + L L L N +IP L +L+ + L
Sbjct: 438 LGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISL 497
Query: 274 SHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDISYNELHGSIP 331
S+N L E+P I +++L L LS+N+ SG IP+ + L ++D++ N +G+IP
Sbjct: 498 SNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 555
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 160/322 (49%), Gaps = 34/322 (10%)
Query: 2 LSNLAFLYLYNNSFSGSIPSEI-GRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFD 60
L +L +L L N F+G IP + G +L+ L+LSGN G++P G+ + + L L
Sbjct: 268 LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSS 327
Query: 61 NALSGAIPKEYGNLVK---LTLLTLENNQLRGPIP-NLRNLT-SLVRVRLNQNHLTGNIS 115
N SG +P + L+K L +L L N+ G +P +L NL+ SL+ + L+ N+ +G I
Sbjct: 328 NNFSGELPMD--TLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPIL 385
Query: 116 ESFGIHP--NLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGSMPAEIIHSSQLK 173
+ +P L + L +N F G+I C +L +L S N ++G++P+ + S+L+
Sbjct: 386 PNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLR 445
Query: 174 VLDLSSNHIVGEMPXXXXXXXXXXXXXXXXXXXCGQLSLELGSLTQXXXXXXXXXXXXXX 233
L L N + GE+P L L+ LT
Sbjct: 446 DLKLWLNMLEGEIPQELMYVKTLE-----------TLILDFNDLTGE------------- 481
Query: 234 IPKSLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLE 293
IP L N L++++LSNN+ +IP + +L +L+ L LS+N +P+++ + +SL
Sbjct: 482 IPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLI 541
Query: 294 KLNLSHNNLSGFIPSCFEELHG 315
L+L+ N +G IP+ + G
Sbjct: 542 WLDLNTNLFNGTIPAAMFKQSG 563
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 107/210 (50%), Gaps = 23/210 (10%)
Query: 1 NLSNLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFD 60
N +NL ++ L NN +G IP IGRL++L+ L+LS N G+IP LG+ + +L L
Sbjct: 488 NCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNT 547
Query: 61 NALSGAIP----KEYGNLVKLTL-----LTLENNQLRGPIPNLRNLTSLVRVRLNQ-NHL 110
N +G IP K+ G + + + ++N+ ++ NL +R Q N L
Sbjct: 548 NLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRL 607
Query: 111 T-------------GNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNN 157
+ G+ S +F + ++ F+D+S+N G I + G P L L+ N+
Sbjct: 608 STRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHND 667
Query: 158 ITGSMPAEIIHSSQLKVLDLSSNHIVGEMP 187
I+GS+P E+ L +LDLSSN + G +P
Sbjct: 668 ISGSIPDEVGDLRGLNILDLSSNKLDGRIP 697
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 127/305 (41%), Gaps = 47/305 (15%)
Query: 2 LSNLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDN 61
LS L L L+ N G IP E+ +K+L L L N L G IP L N T + +++L +N
Sbjct: 441 LSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNN 500
Query: 62 ALSGAIPKEYGNLVKLTLLTLENNQLRGPIP-NLRNLTSLVRVRLNQNHLTGNI-----S 115
L+G IPK G L L +L L NN G IP L + SL+ + LN N G I
Sbjct: 501 RLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFK 560
Query: 116 ESFGIHPNL----AFIDLSHN-------------YFYGEISSDWGRCPKLGTLDFSSNNI 158
+S I N ++ + ++ F G S R + +S
Sbjct: 561 QSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVY 620
Query: 159 TGSMPAEIIHSSQLKVLDLSSNHIVGEMPXXXXXXXXXXXXXXXXXXXCGQLSLELGSLT 218
G ++ + LD+S N + G +P E+GS+
Sbjct: 621 GGHTSPTFDNNGSMMFLDMSYNMLSGYIPK------------------------EIGSMP 656
Query: 219 QXXXXXXXXXXXXXXIPKSLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFL 278
IP +G+L L+ L+LS+N+ +IP + L L+E+DLS+N L
Sbjct: 657 YLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNL 716
Query: 279 GEEMP 283
+P
Sbjct: 717 SGPIP 721
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 50/94 (53%)
Query: 1 NLSNLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFD 60
N ++ FL + N SG IP EIG + L L L N + GSIP +G+L + L L
Sbjct: 630 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSS 689
Query: 61 NALSGAIPKEYGNLVKLTLLTLENNQLRGPIPNL 94
N L G IP+ L LT + L NN L GPIP +
Sbjct: 690 NKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM 723
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 146/295 (49%), Gaps = 25/295 (8%)
Query: 428 YEEIIRVTNDFDDE------HCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMAS-QQ 480
+ E+ VTN+FD+ + +G+GG G VYK + + VAVKK + + +Q
Sbjct: 17 FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQ 75
Query: 481 EFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKR 540
+F E+K + +H N+V+ GF S +VY Y+ GSL LS L W R
Sbjct: 76 QFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMR 135
Query: 541 MNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLK--PDSSNW 598
+ +G + ++++H + +HRDI S N+LLD A +SDFG A+ + +
Sbjct: 136 CKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMX 192
Query: 599 AELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKG-------KHPRDFXXXXXXXX 651
+ + GT Y+APE A ++T K D+YSFGV+ LE+I G + P+
Sbjct: 193 SRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-LLLDIKEEI 250
Query: 652 XNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
+ E + + +D ++ + + S VA CL E RP I+KV QLL+
Sbjct: 251 EDEEKTIEDYIDKKMNDADSTSVEAMYS---VASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 147/299 (49%), Gaps = 33/299 (11%)
Query: 428 YEEIIRVTNDFDDE------HCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMAS-QQ 480
+ E+ VTN+FD+ + +G+GG G VYK + + VAVKK + + +Q
Sbjct: 17 FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQ 75
Query: 481 EFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKR 540
+F E+K + +H N+V+ GF S +VY Y+ GSL LS L W R
Sbjct: 76 QFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMR 135
Query: 541 MNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAE 600
+ +G + ++++H + +HRDI S N+LLD A +SDFG A+ S +A+
Sbjct: 136 CKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARA----SEKFAQ 188
Query: 601 ------LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKG-------KHPRDFXXXX 647
+ GT Y+APE A ++T K D+YSFGV+ LE+I G + P+
Sbjct: 189 TVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-LLLDI 246
Query: 648 XXXXXNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
+ E + + +D ++ + + S VA CL E RP I+KV QLL+
Sbjct: 247 KEEIEDEEKTIEDYIDKKMNDADSTSVEAMYS---VASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 147/299 (49%), Gaps = 33/299 (11%)
Query: 428 YEEIIRVTNDFDDE------HCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMAS-QQ 480
+ E+ VTN+FD+ + +G+GG G VYK + + VAVKK + + +Q
Sbjct: 11 FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQ 69
Query: 481 EFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKR 540
+F E+K + +H N+V+ GF S +VY Y+ GSL LS L W R
Sbjct: 70 QFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMR 129
Query: 541 MNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAE 600
+ +G + ++++H + +HRDI S N+LLD A +SDFG A+ S +A+
Sbjct: 130 CKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARA----SEKFAQ 182
Query: 601 ------LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKG-------KHPRDFXXXX 647
+ GT Y+APE A ++T K D+YSFGV+ LE+I G + P+
Sbjct: 183 XVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-LLLDI 240
Query: 648 XXXXXNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
+ E + + +D ++ + + S VA CL E RP I+KV QLL+
Sbjct: 241 KEEIEDEEKTIEDYIDKKMNDADSTSVEAMYS---VASQCLHEKKNKRPDIKKVQQLLQ 296
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 135/278 (48%), Gaps = 18/278 (6%)
Query: 434 VTNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR 493
TN+FD + IG G G VYK L G VA+K+ P +EF E++TL+ R
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR---RTPESSQGIEEFETEIETLSFCR 93
Query: 494 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAM-ILSNDAAAKDLGWTKRMNVIKGVVDALS 552
H ++V GFC ++Y+Y+E G+L + +D + W +R+ + G L
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLH 153
Query: 553 YMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFG-TAKFLKPDSSNWAELA-GTYGYVAP 610
Y+H I+HRD+ S N+LLD ++DFG + K + D ++ + GT GY+ P
Sbjct: 154 YLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDP 210
Query: 611 ELAYTMKVTEKCDVYSFGVLALEVIKGKH------PRDFXXXXXXXXXNLEIA-LNEMLD 663
E ++TEK DVYSFGV+ EV+ + PR+ + L +++D
Sbjct: 211 EYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVD 270
Query: 664 PRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKV 701
P L + L + A+ CL S E RP++ V
Sbjct: 271 PNLADKIR--PESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 132/280 (47%), Gaps = 22/280 (7%)
Query: 434 VTNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR 493
TN+FD + IG G G VYK L G VA+K+ P +EF E++TL+ R
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR---RTPESSQGIEEFETEIETLSFCR 93
Query: 494 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAM-ILSNDAAAKDLGWTKRMNVIKGVVDALS 552
H ++V GFC ++Y+Y+E G+L + +D + W +R+ + G L
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLH 153
Query: 553 YMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAEL----AGTYGYV 608
Y+H I+HRD+ S N+LLD ++DFG +K K L GT GY+
Sbjct: 154 YLHTRA---IIHRDVKSINILLDENFVPKITDFGISK--KGTELGQTHLXXVVKGTLGYI 208
Query: 609 APELAYTMKVTEKCDVYSFGVLALEVIKGKH------PRDFXXXXXXXXXNLEIA-LNEM 661
PE ++TEK DVYSFGV+ EV+ + PR+ + L ++
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQI 268
Query: 662 LDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKV 701
+DP L + L + A+ CL S E RP++ V
Sbjct: 269 VDPNLADKIR--PESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 136/292 (46%), Gaps = 23/292 (7%)
Query: 420 LSFEGKIVYEEIIRVTNDFDDEHCIGKGGQGSVYKAELPSGEIVAVK-----KFHSPLPS 474
L F+G + +++ D + + IG G G+V++AE G VAVK FH+
Sbjct: 21 LYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHA---- 75
Query: 475 EMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD 534
EFL EV + +RH NIV F G + + IV EYL GSL +L A +
Sbjct: 76 --ERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ 133
Query: 535 LGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPD 594
L +R+++ V ++Y+HN PPIVHRD+ S N+L+D + V DFG ++
Sbjct: 134 LDERRRLSMAYDVAKGMNYLHNRN-PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASX 192
Query: 595 SSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNL 654
AGT ++APE+ EK DVYSFGV+ E+ + P
Sbjct: 193 FLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQV----- 247
Query: 655 EIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
+A RL P N+ ++ +I+E C P RP+ + LL+
Sbjct: 248 -VAAVGFKCKRLEIP-RNLNPQVAAIIE---GCWTNEPWKRPSFATIMDLLR 294
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 138/295 (46%), Gaps = 25/295 (8%)
Query: 428 YEEIIRVTNDFDDE------HCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMAS-QQ 480
+ E+ VTN+FD+ + G+GG G VYK + + VAVKK + + +Q
Sbjct: 8 FYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQ 66
Query: 481 EFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKR 540
+F E+K +H N+V+ GF S +VY Y GSL LS L W R
Sbjct: 67 QFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXR 126
Query: 541 MNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLK--PDSSNW 598
+ +G + ++++H + +HRDI S N+LLD A +SDFG A+ +
Sbjct: 127 CKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXX 183
Query: 599 AELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKG-------KHPRDFXXXXXXXX 651
+ + GT Y APE A ++T K D+YSFGV+ LE+I G + P+
Sbjct: 184 SRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIE 242
Query: 652 XNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
+ + + S +V+ + VA CL E RP I+KV QLL+
Sbjct: 243 DEEKTIEDYIDKKXNDADSTSVE----AXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 137/292 (46%), Gaps = 23/292 (7%)
Query: 420 LSFEGKIVYEEIIRVTNDFDDEHCIGKGGQGSVYKAELPSGEIVAVK-----KFHSPLPS 474
L F+G + +++ D + + IG G G+V++AE G VAVK FH+
Sbjct: 21 LYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHA---- 75
Query: 475 EMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD 534
EFL EV + +RH NIV F G + + IV EYL GSL +L A +
Sbjct: 76 --ERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ 133
Query: 535 LGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPD 594
L +R+++ V ++Y+HN PPIVHR++ S N+L+D + V DFG ++
Sbjct: 134 LDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST 192
Query: 595 SSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNL 654
+ AGT ++APE+ EK DVYSFGV+ E+ + P
Sbjct: 193 FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQV----- 247
Query: 655 EIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
+A RL P N+ ++ +I+E C P RP+ + LL+
Sbjct: 248 -VAAVGFKCKRLEIP-RNLNPQVAAIIE---GCWTNEPWKRPSFATIMDLLR 294
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 124/262 (47%), Gaps = 26/262 (9%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G G G V + VAVK + S+ EF E +T+ + H +VKFYG
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKM----IKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGV 71
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
CS +IV EY+ G L L + K L ++ + + V + ++++ + F +
Sbjct: 72 CSKEYPIYIVTEYISNGCLLNYLR--SHGKGLEPSQLLEMCYDVCEGMAFLESHQF---I 126
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT---YGYVAPELAYTMKVTE 620
HRD++++N L+D + VSDFG +++ D + GT + APE+ + K +
Sbjct: 127 HRDLAARNCLVDRDLCVKVSDFGMTRYVLDD--QYVSSVGTKFPVKWSAPEVFHYFKYSS 184
Query: 621 KCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLIS 679
K DV++FG+L EV GK P D N E+ L RL P H D +
Sbjct: 185 KSDVWAFGILMWEVFSLGKMPYDL-------YTNSEVVLKVSQGHRLYRP-HLASDTIYQ 236
Query: 680 IMEVAISCLDESPESRPTIQKV 701
IM SC E PE RPT Q++
Sbjct: 237 IM---YSCWHELPEKRPTFQQL 255
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 125/279 (44%), Gaps = 34/279 (12%)
Query: 444 IGKGGQGSVYK-AELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+GKG G K +GE++ +K+ + + +Q+ FL EVK + + H N++KF G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKEL---IRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 503 FCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPI 562
+ + EY++ G+L I+ + W++R++ K + ++Y+H+ I
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGIIK--SMDSQYPWSQRVSFAKDIASGMAYLHS---MNI 129
Query: 563 VHRDISSKNVLLDLENEAHVSDFGTAKFL--------------KPDSSNWAELAGTYGYV 608
+HRD++S N L+ V+DFG A+ + KPD + G ++
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 609 APELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFXXXXXXXXXNLEIALNEMLDPRLP 667
APE+ EK DV+SFG++ E+I + D+ N+ L+ P P
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCP 249
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
S + + C D PE RP+ K+ L+
Sbjct: 250 P----------SFFPITVRCCDLDPEKRPSFVKLEHWLE 278
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 124/276 (44%), Gaps = 25/276 (9%)
Query: 441 EHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
E IG GG G VY+A E+ H P + + E K ++H NI+
Sbjct: 12 EEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 501 YGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
G C + +V E+ G L +LS D+ + + +G ++Y+H++
Sbjct: 72 RGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARG----MNYLHDEAIV 127
Query: 561 PIVHRDISSKNVLL-------DLENEA-HVSDFGTAKFLKPDSSNWAELAGTYGYVAPEL 612
PI+HRD+ S N+L+ DL N+ ++DFG A+ + A AG Y ++APE+
Sbjct: 128 PIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA--AGAYAWMAPEV 185
Query: 613 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHN 672
++ DV+S+GVL E++ G+ P +A+N++ LP PS
Sbjct: 186 IRASMFSKGSDVWSYGVLLWELLTGEVP---FRGIDGLAVAYGVAMNKL---ALPIPS-T 238
Query: 673 VQDKLISIMEVAISCLDESPESRPTIQKV-SQLLKI 707
+ +ME C + P SRP+ + QL I
Sbjct: 239 CPEPFAKLME---DCWNPDPHSRPSFTNILDQLTTI 271
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 132/273 (48%), Gaps = 28/273 (10%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELPSGE-IVAVKKF---HSPLPSEMASQ-QEFLNEVKTLT 490
N+ + E IGKGG G V+K L + +VA+K S +EM + QEF EV ++
Sbjct: 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMS 78
Query: 491 GIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDA 550
+ H NIVK YG + +V E++ G L L + A + W+ ++ ++ +
Sbjct: 79 NLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP--IKWSVKLRLMLDIALG 134
Query: 551 LSYMHNDCFPPIVHRDISSKNVLLDLENE-----AHVSDFGTAKFLKPDSSNWAELAGTY 605
+ YM N PPIVHRD+ S N+ L +E A V+DFGT+ + + + L G +
Sbjct: 135 IEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS---QQSVHSVSGLLGNF 190
Query: 606 GYVAPEL--AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLD 663
++APE A TEK D YSF ++ ++ G+ P D N+ E L
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINM--IREEGLR 248
Query: 664 PRLPTPSHNVQDKLISIMEVAISCLDESPESRP 696
P +P + +L +++E+ C P+ RP
Sbjct: 249 PTIP---EDCPPRLRNVIEL---CWSGDPKKRP 275
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 109/198 (55%), Gaps = 11/198 (5%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IG+G G+VY A ++ +G+ VA+++ + + ++ +NE+ + ++ NIV +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNL---QQQPKKELIINEILVMRENKNPNIVNYLD 84
Query: 503 FCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPI 562
++V EYL GSL +++ D G + V + + AL ++H++ +
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEG--QIAAVCRECLQALEFLHSN---QV 137
Query: 563 VHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKC 622
+HRDI S N+LL ++ ++DFG + P+ S +E+ GT ++APE+ K
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKV 197
Query: 623 DVYSFGVLALEVIKGKHP 640
D++S G++A+E+I+G+ P
Sbjct: 198 DIWSLGIMAIEMIEGEPP 215
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 131/273 (47%), Gaps = 28/273 (10%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELPSGE-IVAVKKF---HSPLPSEMASQ-QEFLNEVKTLT 490
N+ + E IGKGG G V+K L + +VA+K S +EM + QEF EV ++
Sbjct: 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMS 78
Query: 491 GIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDA 550
+ H NIVK YG + +V E++ G L L + A + W+ ++ ++ +
Sbjct: 79 NLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP--IKWSVKLRLMLDIALG 134
Query: 551 LSYMHNDCFPPIVHRDISSKNVLLDLENE-----AHVSDFGTAKFLKPDSSNWAELAGTY 605
+ YM N PPIVHRD+ S N+ L +E A V+DFG + + + + L G +
Sbjct: 135 IEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS---QQSVHSVSGLLGNF 190
Query: 606 GYVAPEL--AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLD 663
++APE A TEK D YSF ++ ++ G+ P D N+ E L
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINM--IREEGLR 248
Query: 664 PRLPTPSHNVQDKLISIMEVAISCLDESPESRP 696
P +P + +L +++E+ C P+ RP
Sbjct: 249 PTIP---EDCPPRLRNVIEL---CWSGDPKKRP 275
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 103/206 (50%), Gaps = 9/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
DF+ +GKG G+VY A E S I+A+K + + + EV+ + +RH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NI++ YG+ A +++ EY +G++ L + + + I + +ALSY
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALSYC 124
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRDI +N+LL E ++DFG + + SS EL GT Y+ PE+
Sbjct: 125 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTELCGTLDYLPPEMIE 179
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
EK D++S GVL E + GK P
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 133/274 (48%), Gaps = 31/274 (11%)
Query: 438 FDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRN 496
FD +G+G GSVYKA +G+IVA+K+ P+ S++ QE + E+ + +
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV--PVESDL---QEIIKEISIMQQCDSPH 85
Query: 497 IVKFYGFCSHARHSFIVYEYLEMGSLAMI--LSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+VK+YG +IV EY GS++ I L N +D T + +KG L Y+
Sbjct: 86 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKG----LEYL 141
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H F +HRDI + N+LL+ E A ++DFG A L + + GT ++APE+
Sbjct: 142 H---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQ 198
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQ 674
+ D++S G+ A+E+ +GK P ++ + P P P+ +
Sbjct: 199 EIGYNCVADIWSLGITAIEMAEGKPP----------YADIHPMRAIFMIPTNPPPTFR-K 247
Query: 675 DKLIS--IMEVAISCLDESPESRPTIQKVSQLLK 706
+L S + CL +SPE R T +QLL+
Sbjct: 248 PELWSDNFTDFVKQCLVKSPEQRAT---ATQLLQ 278
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 102/187 (54%), Gaps = 2/187 (1%)
Query: 2 LSNLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDN 61
L+ L +LY+ + + SG+IP + ++K+L L+ S N L G++P S+ +L + +T N
Sbjct: 100 LTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159
Query: 62 ALSGAIPKEYGNLVKL-TLLTLENNQLRGPIPNLRNLTSLVRVRLNQNHLTGNISESFGI 120
+SGAIP YG+ KL T +T+ N+L G IP +L V L++N L G+ S FG
Sbjct: 160 RISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGS 219
Query: 121 HPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSN 180
N I L+ N ++ G L LD +N I G++P + L L++S N
Sbjct: 220 DKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFN 278
Query: 181 HIVGEMP 187
++ GE+P
Sbjct: 279 NLCGEIP 285
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 101/253 (39%), Gaps = 27/253 (10%)
Query: 108 NHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGSMPAEII 167
N+L G I + L ++ ++H G I + L TLDFS N ++G++P I
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146
Query: 168 HSSQLKVLDLSSNHIVGEMPXXXXXXXXXXXXXXXXXXXCGQLSLELGSLTQXXXXXXXX 227
L + N I G +P G S S+T
Sbjct: 147 SLPNLVGITFDGNRISGAIPDSY-----------------GSFSKLFTSMT------ISR 183
Query: 228 XXXXXXIPKSLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQIC 287
IP + NL L +++LS N V + ++ L+ N L ++ ++
Sbjct: 184 NRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-GKVG 241
Query: 288 NMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDISYNELHGSIPNSTAFRDAPMEALQGN 347
++L L+L +N + G +P +L L +++S+N L G IP + + A N
Sbjct: 242 LSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANN 301
Query: 348 KGLCGDIKGFPSC 360
K LCG P+C
Sbjct: 302 KCLCG--SPLPAC 312
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 234 IPKSLGNLVKLHYLNLSN-NQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSL 292
IP SL NL L++L + N + IP + KL L L ++H + +P + +++L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 293 EKLNLSHNNLSGFIPSCFEELHGLSYIDISYNELHGSIPNS 333
L+ S+N LSG +P L L I N + G+IP+S
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDS 168
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 103/206 (50%), Gaps = 9/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
DF+ +GKG G+VY A E S I+A+K + + + EV+ + +RH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NI++ YG+ A +++ EY +G++ L + + + I + +ALSY
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALSYC 124
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRDI +N+LL E ++DFG + + SS A L GT Y+ PE+
Sbjct: 125 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIE 179
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
EK D++S GVL E + GK P
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 103/206 (50%), Gaps = 9/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
DF+ +GKG G+VY A E S I+A+K + + + EV+ + +RH
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NI++ YG+ A +++ EY +G++ L + + + I + +ALSY
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALSYC 127
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRDI +N+LL E ++DFG + + SS A L GT Y+ PE+
Sbjct: 128 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIE 182
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
EK D++S GVL E + GK P
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 108/198 (54%), Gaps = 11/198 (5%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IG+G G+VY A ++ +G+ VA+++ + + ++ +NE+ + ++ NIV +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNL---QQQPKKELIINEILVMRENKNPNIVNYLD 84
Query: 503 FCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPI 562
++V EYL GSL +++ D G + V + + AL ++H++ +
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEG--QIAAVCRECLQALEFLHSN---QV 137
Query: 563 VHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKC 622
+HRDI S N+LL ++ ++DFG + P+ S + + GT ++APE+ K
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKV 197
Query: 623 DVYSFGVLALEVIKGKHP 640
D++S G++A+E+I+G+ P
Sbjct: 198 DIWSLGIMAIEMIEGEPP 215
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 108/198 (54%), Gaps = 11/198 (5%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IG+G G+VY A ++ +G+ VA+++ + + ++ +NE+ + ++ NIV +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNL---QQQPKKELIINEILVMRENKNPNIVNYLD 84
Query: 503 FCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPI 562
++V EYL GSL +++ D G + V + + AL ++H++ +
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEG--QIAAVCRECLQALEFLHSN---QV 137
Query: 563 VHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKC 622
+HRDI S N+LL ++ ++DFG + P+ S + + GT ++APE+ K
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKV 197
Query: 623 DVYSFGVLALEVIKGKHP 640
D++S G++A+E+I+G+ P
Sbjct: 198 DIWSLGIMAIEMIEGEPP 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 108/198 (54%), Gaps = 11/198 (5%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IG+G G+VY A ++ +G+ VA+++ + + ++ +NE+ + ++ NIV +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNL---QQQPKKELIINEILVMRENKNPNIVNYLD 85
Query: 503 FCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPI 562
++V EYL GSL +++ D G + V + + AL ++H++ +
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEG--QIAAVCRECLQALEFLHSN---QV 138
Query: 563 VHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKC 622
+HRDI S N+LL ++ ++DFG + P+ S + + GT ++APE+ K
Sbjct: 139 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKV 198
Query: 623 DVYSFGVLALEVIKGKHP 640
D++S G++A+E+I+G+ P
Sbjct: 199 DIWSLGIMAIEMIEGEPP 216
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 9/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
DF+ +GKG G+VY A E S I+A+K + + + EV+ + +RH
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NI++ YG+ A +++ EY +G++ L + + + I + +ALSY
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALSYC 125
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRDI +N+LL E ++DFG + + SS +L GT Y+ PE+
Sbjct: 126 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIE 180
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
EK D++S GVL E + GK P
Sbjct: 181 GRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 9/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
DF+ +GKG G+VY A E S I+A+K + + + EV+ + +RH
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NI++ YG+ A +++ EY +G++ L + + + I + +ALSY
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALSYC 129
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRDI +N+LL E ++DFG + + SS +L GT Y+ PE+
Sbjct: 130 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIE 184
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
EK D++S GVL E + GK P
Sbjct: 185 GRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 9/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
DF+ +GKG G+VY A E S I+A+K + + + EV+ + +RH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NI++ YG+ A +++ EY +G++ L + + + I + +ALSY
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALSYC 124
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRDI +N+LL E ++DFG + + SS +L GT Y+ PE+
Sbjct: 125 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIE 179
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
EK D++S GVL E + GK P
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 9/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
DF+ +GKG G+VY A E S I+A+K + + + EV+ + +RH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NI++ YG+ A +++ EY +G++ L + + + I + +ALSY
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALSYC 124
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRDI +N+LL E ++DFG + + SS +L GT Y+ PE+
Sbjct: 125 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIE 179
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
EK D++S GVL E + GK P
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 9/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
DF+ +GKG G+VY A E S I+A+K + + + EV+ + +RH
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NI++ YG+ A +++ EY +G++ L + + + I + +ALSY
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALSYC 127
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRDI +N+LL E ++DFG + + SS +L GT Y+ PE+
Sbjct: 128 HSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEMIE 182
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
EK D++S GVL E + GK P
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 130/273 (47%), Gaps = 28/273 (10%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELPSGE-IVAVKKF---HSPLPSEMASQ-QEFLNEVKTLT 490
N+ + E IGKGG G V+K L + +VA+K S +EM + QEF EV ++
Sbjct: 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMS 78
Query: 491 GIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDA 550
+ H NIVK YG + +V E++ G L L + A + W+ ++ ++ +
Sbjct: 79 NLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP--IKWSVKLRLMLDIALG 134
Query: 551 LSYMHNDCFPPIVHRDISSKNVLLDLENE-----AHVSDFGTAKFLKPDSSNWAELAGTY 605
+ YM N PPIVHRD+ S N+ L +E A V+DF + + + + L G +
Sbjct: 135 IEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS---QQSVHSVSGLLGNF 190
Query: 606 GYVAPEL--AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLD 663
++APE A TEK D YSF ++ ++ G+ P D N+ E L
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINM--IREEGLR 248
Query: 664 PRLPTPSHNVQDKLISIMEVAISCLDESPESRP 696
P +P + +L +++E+ C P+ RP
Sbjct: 249 PTIP---EDCPPRLRNVIEL---CWSGDPKKRP 275
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 9/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
DF+ +GKG G+VY A E S I+A+K + + + EV+ + +RH
Sbjct: 7 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 66
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NI++ YG+ A +++ EY +G++ L + + + I + +ALSY
Sbjct: 67 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALSYC 123
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRDI +N+LL E ++DFG + + SS L GT Y+ PE+
Sbjct: 124 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIE 178
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
EK D++S GVL E + GK P
Sbjct: 179 GRMHDEKVDLWSLGVLCYEFLVGKPP 204
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 9/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
DF+ +GKG G+VY A E S I+A+K + + + EV+ + +RH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NI++ YG+ A +++ EY +G++ L + + + I + +ALSY
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALSYC 124
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRDI +N+LL E ++DFG + + SS L GT Y+ PE+
Sbjct: 125 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTXLCGTLDYLPPEMIE 179
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
EK D++S GVL E + GK P
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 9/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
DF+ +GKG G+VY A E S I+A+K + + + EV+ + +RH
Sbjct: 12 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 71
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NI++ YG+ A +++ EY +G++ L + + + I + +ALSY
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALSYC 128
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRDI +N+LL E ++DFG + + SS L GT Y+ PE+
Sbjct: 129 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIE 183
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
EK D++S GVL E + GK P
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGKPP 209
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 9/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
DF+ +GKG G+VY A E S I+A+K + + + EV+ + +RH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NI++ YG+ A +++ EY +G++ L + + + I + +ALSY
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALSYC 124
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRDI +N+LL E ++DFG + + SS L GT Y+ PE+
Sbjct: 125 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIE 179
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
EK D++S GVL E + GK P
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 9/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
DF+ +GKG G+VY A E S I+A+K + + + EV+ + +RH
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NI++ YG+ A +++ EY +G++ L + + + I + +ALSY
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALSYC 127
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRDI +N+LL E ++DFG + + SS L GT Y+ PE+
Sbjct: 128 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIE 182
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
EK D++S GVL E + GK P
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 9/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
DF+ +GKG G+VY A E S I+A+K + + + EV+ + +RH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NI++ YG+ + +++ EY +G++ L + + + I + +ALSY
Sbjct: 68 PNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALSYC 124
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRDI +N+LL E ++DFG + + SS A L GT Y+ PE+
Sbjct: 125 HSK---KVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIE 179
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
EK D++S GVL E + GK P
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 9/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
DF+ +GKG G+VY A E S I+A+K + + + EV+ + +RH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NI++ YG+ A +++ EY +G++ L + + + I + +ALSY
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALSYC 124
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRDI +N+LL E ++DFG + + SS L GT Y+ PE+
Sbjct: 125 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIE 179
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
EK D++S GVL E + GK P
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 9/205 (4%)
Query: 437 DFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHR 495
DF+ +GKG G+VY A E S I+A+K + + + EV+ + +RH
Sbjct: 35 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 94
Query: 496 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMH 555
NI++ YG+ A +++ EY +G++ L + + + I + +ALSY H
Sbjct: 95 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALSYCH 151
Query: 556 NDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT 615
+ ++HRDI +N+LL E ++DFG + + SS +L GT Y+ PE+
Sbjct: 152 SKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEMIEG 206
Query: 616 MKVTEKCDVYSFGVLALEVIKGKHP 640
EK D++S GVL E + GK P
Sbjct: 207 RMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 9/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
DF+ +GKG G+VY A E S I+A+K + + + EV+ + +RH
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NI++ YG+ A +++ EY +G++ L + + + I + +ALSY
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALSYC 127
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRDI +N+LL E ++DFG + + SS L GT Y+ PE+
Sbjct: 128 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIE 182
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
EK D++S GVL E + GK P
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 9/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
DF+ +GKG G+VY A E S I+A+K + + + EV+ + +RH
Sbjct: 10 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 69
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NI++ YG+ A +++ EY +G++ L + + + I + +ALSY
Sbjct: 70 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALSYC 126
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRDI +N+LL E ++DFG + + SS L GT Y+ PE+
Sbjct: 127 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIE 181
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
EK D++S GVL E + GK P
Sbjct: 182 GRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 9/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
DF+ +GKG G+VY A E S I+A+K + + + EV+ + +RH
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NI++ YG+ A +++ EY +G++ L + + + I + +ALSY
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALSYC 129
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRDI +N+LL E ++DFG + + SS L GT Y+ PE+
Sbjct: 130 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIE 184
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
EK D++S GVL E + GK P
Sbjct: 185 GRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 9/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
DFD +GKG G+VY A E S I+A+K + + + EV+ + +RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NI++ YG+ A +++ EY +G++ L + + + I + +ALSY
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE---QRTATYITELANALSYC 128
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRDI +N+LL E ++DFG + + SS L GT Y+ PE+
Sbjct: 129 HSK---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIE 183
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
EK D++S GVL E + G P
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 9/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
DF+ +GKG G+VY A E S I+A+K + + + EV+ + +RH
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NI++ YG+ A +++ EY +G++ L + + + I + +ALSY
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALSYC 127
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRDI +N+LL E ++DFG + + SS L GT Y+ PE+
Sbjct: 128 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIE 182
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
EK D++S GVL E + GK P
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 9/205 (4%)
Query: 437 DFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHR 495
DF+ +GKG G+VY A E S I+A+K + + + EV+ + +RH
Sbjct: 35 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 94
Query: 496 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMH 555
NI++ YG+ A +++ EY +G++ L + + + I + +ALSY H
Sbjct: 95 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALSYCH 151
Query: 556 NDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT 615
+ ++HRDI +N+LL E ++DFG + + SS L GT Y+ PE+
Sbjct: 152 SKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 206
Query: 616 MKVTEKCDVYSFGVLALEVIKGKHP 640
EK D++S GVL E + GK P
Sbjct: 207 RMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 9/205 (4%)
Query: 437 DFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHR 495
DF+ +GKG G+VY A E S I+A+K + + + EV+ + +RH
Sbjct: 26 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 85
Query: 496 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMH 555
NI++ YG+ A +++ EY +G++ L + + + I + +ALSY H
Sbjct: 86 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALSYCH 142
Query: 556 NDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT 615
+ ++HRDI +N+LL E ++DFG + + SS L GT Y+ PE+
Sbjct: 143 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 197
Query: 616 MKVTEKCDVYSFGVLALEVIKGKHP 640
EK D++S GVL E + GK P
Sbjct: 198 RMHDEKVDLWSLGVLCYEFLVGKPP 222
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 9/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
DF+ +GKG G+VY A E S I+A+K + + + EV+ + +RH
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NI++ YG+ A +++ EY +G++ L + + + I + +ALSY
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALSYC 125
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRDI +N+LL E ++DFG + SS L+GT Y+ PE+
Sbjct: 126 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--CHAPSSRRTTLSGTLDYLPPEMIE 180
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
EK D++S GVL E + GK P
Sbjct: 181 GRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 9/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
DF+ +GKG G+VY A E S I+A+K + + + EV+ + +RH
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NI++ YG+ A +++ EY +G++ L + + + I + +ALSY
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALSYC 125
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRDI +N+LL E ++DFG + + SS L GT Y+ PE+
Sbjct: 126 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIE 180
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
EK D++S GVL E + GK P
Sbjct: 181 GRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 108/198 (54%), Gaps = 11/198 (5%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IG+G G+VY A ++ +G+ VA+++ + + ++ +NE+ + ++ NIV +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNL---QQQPKKELIINEILVMRENKNPNIVNYLD 85
Query: 503 FCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPI 562
++V EYL GSL +++ D G + V + + AL ++H++ +
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEG--QIAAVCRECLQALEFLHSN---QV 138
Query: 563 VHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKC 622
+HR+I S N+LL ++ ++DFG + P+ S + + GT ++APE+ K
Sbjct: 139 IHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKV 198
Query: 623 DVYSFGVLALEVIKGKHP 640
D++S G++A+E+I+G+ P
Sbjct: 199 DIWSLGIMAIEMIEGEPP 216
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 9/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
DFD +GKG G+VY A E S I+A+K + + + EV+ + +RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NI++ YG+ A +++ EY +G++ L + + + I + +ALSY
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE---QRTATYITELANALSYC 128
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRDI +N+LL E ++DFG + + SS L GT Y+ PE+
Sbjct: 129 HSK---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIE 183
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
EK D++S GVL E + G P
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 101/206 (49%), Gaps = 9/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
DF+ +GKG G+VY A E I+A+K + + + EV+ + +RH
Sbjct: 5 EDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 64
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NI++ YG+ A +++ EY +G++ L + + + I + +ALSY
Sbjct: 65 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALSYC 121
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRDI +N+LL E ++DFG + + SS L GT Y+ PE+
Sbjct: 122 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIE 176
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
EK D++S GVL E + GK P
Sbjct: 177 GRMHDEKVDLWSLGVLCYEFLVGKPP 202
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 9/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
DF+ +GKG G+VY A E S I+A+K + + + EV+ + +RH
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NI++ YG+ A +++ EY +G++ L + + + I + +ALSY
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALSYC 129
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRDI +N+LL E ++DFG + + SS L GT Y+ PE
Sbjct: 130 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEXIE 184
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
EK D++S GVL E + GK P
Sbjct: 185 GRXHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 120/266 (45%), Gaps = 24/266 (9%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G G G V+ VA+K P M S + FL E + + ++H +V+ Y
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLK---PGTM-SPESFLEEAQIMKKLKHDKLVQLYAV 72
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
S +IV EY+ GSL L D + L +++ V ++Y+ + +
Sbjct: 73 VSE-EPIYIVTEYMNKGSLLDFLK-DGEGRALKLPNLVDMAAQVAAGMAYIERMNY---I 127
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPELAYTMKVTEK 621
HRD+ S N+L+ ++DFG A+ ++ D+ A + + APE A + T K
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIE-DNEXTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 622 CDVYSFGVLALE-VIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISI 680
DV+SFG+L E V KG+ P N E+ R+P P QD IS+
Sbjct: 187 SDVWSFGILLTELVTKGRVP-------YPGMNNREVLEQVERGYRMPCP----QDCPISL 235
Query: 681 MEVAISCLDESPESRPTIQKVSQLLK 706
E+ I C + PE RPT + + L+
Sbjct: 236 HELMIHCWKKDPEERPTFEYLQSFLE 261
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 102/206 (49%), Gaps = 9/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
DF+ +GKG G+VY A E S I+A+K + + + EV+ + +RH
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NI++ YG+ A +++ EY +G++ L + + + I + +ALSY
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALSYC 127
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRDI +N+LL E +++FG + + SS L GT Y+ PE+
Sbjct: 128 HSK---RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEMIE 182
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
EK D++S GVL E + GK P
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 102/206 (49%), Gaps = 9/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
DF+ +GKG G+VY A E S I+A+K + + + EV+ + +RH
Sbjct: 10 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 69
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NI++ YG+ A +++ EY +G++ L + + + I + +ALSY
Sbjct: 70 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALSYC 126
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRDI +N+LL E +++FG + + SS L GT Y+ PE+
Sbjct: 127 HSK---RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEMIE 181
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
EK D++S GVL E + GK P
Sbjct: 182 GRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 9/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
DF+ +GKG G+VY A E S I+A+K + + + EV+ + +RH
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NI++ YG+ A +++ EY G + L + + + I + +ALSY
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDE---QRTATYITELANALSYC 129
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRDI +N+LL E ++DFG + + SS L GT Y+ PE+
Sbjct: 130 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIE 184
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
EK D++S GVL E + GK P
Sbjct: 185 GRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 134/277 (48%), Gaps = 33/277 (11%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHR 495
+ + E +G+G G V KA+ + + VA+K+ S + ++ F+ E++ L+ + H
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKWRAKD-VAIKQIES-----ESERKAFIVELRQLSRVNHP 62
Query: 496 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSND------AAAKDLGWTKRMNVIKGVVD 549
NIVK YG C + +V EY E GSL +L AA + W + +GV
Sbjct: 63 NIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC--LQCSQGV-- 116
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEA-HVSDFGTAKFLKPDSSNWAELAGTYGYV 608
+Y+H+ ++HRD+ N+LL + DFGTA ++ +N G+ ++
Sbjct: 117 --AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTN---NKGSAAWM 171
Query: 609 APELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPT 668
APE+ +EKCDV+S+G++ EVI + P D + A++ P L
Sbjct: 172 APEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD---EIGGPAFRIMWAVHNGTRPPL-- 226
Query: 669 PSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLL 705
N+ + S+M C + P RP+++++ +++
Sbjct: 227 -IKNLPKPIESLM---TRCWSKDPSQRPSMEEIVKIM 259
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 9/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
DF+ +GKG G+VY A E S I+A+K + + + EV+ + +RH
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NI++ YG+ A +++ EY G + L + + + I + +ALSY
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDE---QRTATYITELANALSYC 129
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRDI +N+LL E ++DFG + + SS L GT Y+ PE+
Sbjct: 130 HSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLXGTLDYLPPEMIE 184
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
EK D++S GVL E + GK P
Sbjct: 185 GRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 134/277 (48%), Gaps = 33/277 (11%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHR 495
+ + E +G+G G V KA+ + + VA+K+ S + ++ F+ E++ L+ + H
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKWRAKD-VAIKQIES-----ESERKAFIVELRQLSRVNHP 61
Query: 496 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSND------AAAKDLGWTKRMNVIKGVVD 549
NIVK YG C + +V EY E GSL +L AA + W + +GV
Sbjct: 62 NIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC--LQCSQGV-- 115
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEA-HVSDFGTAKFLKPDSSNWAELAGTYGYV 608
+Y+H+ ++HRD+ N+LL + DFGTA ++ +N G+ ++
Sbjct: 116 --AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTN---NKGSAAWM 170
Query: 609 APELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPT 668
APE+ +EKCDV+S+G++ EVI + P D + A++ P L
Sbjct: 171 APEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD---EIGGPAFRIMWAVHNGTRPPL-- 225
Query: 669 PSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLL 705
N+ + S+M C + P RP+++++ +++
Sbjct: 226 -IKNLPKPIESLM---TRCWSKDPSQRPSMEEIVKIM 258
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 135/290 (46%), Gaps = 51/290 (17%)
Query: 444 IGKGGQGSVYKAEL----PSGE--IVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNI 497
+G+G G V+ AE P+ + +VAVK P +A++++F E + LT ++H +I
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP---TLAARKDFQREAELLTNLQHEHI 79
Query: 498 VKFYGFCSHARHSFIVYEYLEMGSL----------AMILSN---DAAAKDLGWTKRMNVI 544
VKFYG C +V+EY++ G L AMIL + A +LG ++ +++
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 545 KGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG- 603
+ + Y+ + F VHRD++++N L+ + DFG ++ + S+++ + G
Sbjct: 140 SQIASGMVYLASQHF---VHRDLATRNCLVGANLLVKIGDFGMSRDVY--STDYYRVGGH 194
Query: 604 ---TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLE---- 655
++ PE K T + DV+SFGV+ E+ GK P N E
Sbjct: 195 TMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP-------WFQLSNTEVIEC 247
Query: 656 IALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLL 705
I +L+ P + +V + C P+ R I+++ ++L
Sbjct: 248 ITQGRVLERPRVCPK--------EVYDVMLGCWQREPQQRLNIKEIYKIL 289
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 20/225 (8%)
Query: 478 SQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGW 537
S+ EF+ E K + + H +V+ YG C+ R FI+ EY+ G L L
Sbjct: 62 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQT 119
Query: 538 TKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN 597
+ + + K V +A+ Y+ + F +HRD++++N L++ + VSDFG ++++ D
Sbjct: 120 QQLLEMCKDVCEAMEYLESKQF---LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEET 176
Query: 598 WAELAGTY--GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNL 654
+ + + + PE+ K + K D+++FGVL E+ GK P + N
Sbjct: 177 -SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE-------RFTNS 228
Query: 655 EIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQ 699
E A + RL P H +K+ +IM SC E + RPT +
Sbjct: 229 ETAEHIAQGLRLYRP-HLASEKVYTIM---YSCWHEKADERPTFK 269
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 108/229 (47%), Gaps = 28/229 (12%)
Query: 478 SQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGW 537
S+ EF+ E K + + H +V+ YG C+ R FI+ EY+ G L L
Sbjct: 62 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQT 119
Query: 538 TKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN 597
+ + + K V +A+ Y+ + F +HRD++++N L++ + VSDFG ++++ D
Sbjct: 120 QQLLEMCKDVCEAMEYLESKQF---LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD--- 173
Query: 598 WAELAGTYG------YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXX 650
E + G + PE+ K + K D+++FGVL E+ GK P +
Sbjct: 174 --EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE-------R 224
Query: 651 XXNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQ 699
N E A + RL P H +K+ +IM SC E + RPT +
Sbjct: 225 FTNSETAEHIAQGLRLYRP-HLASEKVYTIM---YSCWHEKADERPTFK 269
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 108/229 (47%), Gaps = 28/229 (12%)
Query: 478 SQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGW 537
S+ EF+ E K + + H +V+ YG C+ R FI+ EY+ G L L
Sbjct: 53 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQT 110
Query: 538 TKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN 597
+ + + K V +A+ Y+ + F +HRD++++N L++ + VSDFG ++++ D
Sbjct: 111 QQLLEMCKDVCEAMEYLESKQF---LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD--- 164
Query: 598 WAELAGTYG------YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXX 650
E + G + PE+ K + K D+++FGVL E+ GK P +
Sbjct: 165 --EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE-------R 215
Query: 651 XXNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQ 699
N E A + RL P H +K+ +IM SC E + RPT +
Sbjct: 216 FTNSETAEHIAQGLRLYRP-HLASEKVYTIM---YSCWHEKADERPTFK 260
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 119/263 (45%), Gaps = 32/263 (12%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G G G V + VA+K + S+ EF+ E K + + H +V+ YG
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKM----IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
C+ R FI+ EY+ G L L + + + K V +A+ Y+ + F +
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESKQF---L 127
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG------YVAPELAYTMK 617
HRD++++N L++ + VSDFG ++++ D E + G + PE+ K
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-----EYTSSRGSKFPVRWSPPEVLMYSK 182
Query: 618 VTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDK 676
+ K D+++FGVL E+ GK P + N E A + RL P H +K
Sbjct: 183 FSSKSDIWAFGVLMWEIYSLGKMPYE-------RFTNSETAEHIAQGLRLYRP-HLASEK 234
Query: 677 LISIMEVAISCLDESPESRPTIQ 699
+ +IM SC E + RPT +
Sbjct: 235 VYTIM---YSCWHEKADERPTFK 254
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 119/263 (45%), Gaps = 32/263 (12%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G G G V + VA+K + S+ EF+ E K + + H +V+ YG
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKM----IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
C+ R FI+ EY+ G L L + + + K V +A+ Y+ + F +
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESKQF---L 127
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG------YVAPELAYTMK 617
HRD++++N L++ + VSDFG ++++ D E + G + PE+ K
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-----EYTSSVGSKFPVRWSPPEVLMYSK 182
Query: 618 VTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDK 676
+ K D+++FGVL E+ GK P + N E A + RL P H +K
Sbjct: 183 FSSKSDIWAFGVLMWEIYSLGKMPYE-------RFTNSETAEHIAQGLRLYRP-HLASEK 234
Query: 677 LISIMEVAISCLDESPESRPTIQ 699
+ +IM SC E + RPT +
Sbjct: 235 VYTIM---YSCWHEKADERPTFK 254
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 108/229 (47%), Gaps = 28/229 (12%)
Query: 478 SQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGW 537
S+ EF+ E K + + H +V+ YG C+ R FI+ EY+ G L L
Sbjct: 46 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQT 103
Query: 538 TKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN 597
+ + + K V +A+ Y+ + F +HRD++++N L++ + VSDFG ++++ D
Sbjct: 104 QQLLEMCKDVCEAMEYLESKQF---LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD--- 157
Query: 598 WAELAGTYG------YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXX 650
E + G + PE+ K + K D+++FGVL E+ GK P +
Sbjct: 158 --EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE-------R 208
Query: 651 XXNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQ 699
N E A + RL P H +K+ +IM SC E + RPT +
Sbjct: 209 FTNSETAEHIAQGLRLYRP-HLASEKVYTIM---YSCWHEKADERPTFK 253
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 108/229 (47%), Gaps = 28/229 (12%)
Query: 478 SQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGW 537
S+ EF+ E K + + H +V+ YG C+ R FI+ EY+ G L L
Sbjct: 42 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQT 99
Query: 538 TKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN 597
+ + + K V +A+ Y+ + F +HRD++++N L++ + VSDFG ++++ D
Sbjct: 100 QQLLEMCKDVCEAMEYLESKQF---LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD--- 153
Query: 598 WAELAGTYG------YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXX 650
E + G + PE+ K + K D+++FGVL E+ GK P +
Sbjct: 154 --EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE-------R 204
Query: 651 XXNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQ 699
N E A + RL P H +K+ +IM SC E + RPT +
Sbjct: 205 FTNSETAEHIAQGLRLYRP-HLASEKVYTIM---YSCWHEKADERPTFK 249
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 130/286 (45%), Gaps = 42/286 (14%)
Query: 444 IGKGGQGSVYKAE----LPSGE--IVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNI 497
+G+G G V+ AE LP + +VAVK + +++Q+F E + LT ++H++I
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE---ASESARQDFQREAELLTMLQHQHI 105
Query: 498 VKFYGFCSHARHSFIVYEYLEMGSLAMILSN------------DAAAKDLGWTKRMNVIK 545
V+F+G C+ R +V+EY+ G L L + D A LG + + V
Sbjct: 106 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 165
Query: 546 GVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT- 604
V + Y+ F VHRD++++N L+ + DFG ++ + S+++ + G
Sbjct: 166 QVAAGMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMSRDIY--STDYYRVGGRT 220
Query: 605 ---YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNE 660
++ PE K T + DV+SFGV+ E+ GK P + + E
Sbjct: 221 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP--WYQLSNTEAIDCITQGRE 278
Query: 661 MLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
+ PR P ++ +IM C P+ R +I+ V L+
Sbjct: 279 LERPRACPP------EVYAIMR---GCWQREPQQRHSIKDVHARLQ 315
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 119/263 (45%), Gaps = 20/263 (7%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
IG G G+VYK + V + +P P ++ Q F NEV L RH NI+ F G+
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 76
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+ + + IV ++ E SL L A+ K +++ + + Y+H I+
Sbjct: 77 STKPQLA-IVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLHAKS---II 130
Query: 564 HRDISSKNVLLDLENEAHVSDFG--TAKFLKPDSSNWAELAGTYGYVAPELAYTMK---V 618
HRD+ S N+ L +N + DFG T K S + +L+G+ ++APE+
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 190
Query: 619 TEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLI 678
+ + DVY+FG++ E++ G+ P +E+ L P L N ++
Sbjct: 191 SFQSDVYAFGIVLYELMTGQLP---YSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMK 247
Query: 679 SIMEVAISCLDESPESRPTIQKV 701
+M CL + + RP+ ++
Sbjct: 248 RLMA---ECLKKKRDERPSFPRI 267
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 118/263 (44%), Gaps = 20/263 (7%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
IG G G+VYK + V + +P P ++ Q F NEV L RH NI+ F G+
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 88
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
S A IV ++ E SL L A+ K +++ + + Y+H I+
Sbjct: 89 -STAPQLAIVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLHAKS---II 142
Query: 564 HRDISSKNVLLDLENEAHVSDFG--TAKFLKPDSSNWAELAGTYGYVAPELAYTMK---V 618
HRD+ S N+ L +N + DFG T K S + +L+G+ ++APE+
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 619 TEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLI 678
+ + DVY+FG++ E++ G+ P +E+ L P L N ++
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLP---YSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMK 259
Query: 679 SIMEVAISCLDESPESRPTIQKV 701
+M CL + + RP+ ++
Sbjct: 260 RLM---AECLKKKRDERPSFPRI 279
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 119/263 (45%), Gaps = 20/263 (7%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
IG G G+VYK + V + +P P ++ Q F NEV L RH NI+ F G+
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 88
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+ + + IV ++ E SL L A+ K +++ + + Y+H I+
Sbjct: 89 STKPQLA-IVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLHAKS---II 142
Query: 564 HRDISSKNVLLDLENEAHVSDFG--TAKFLKPDSSNWAELAGTYGYVAPELAYTMK---V 618
HRD+ S N+ L +N + DFG T K S + +L+G+ ++APE+
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 619 TEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLI 678
+ + DVY+FG++ E++ G+ P +E+ L P L N ++
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLP---YSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMK 259
Query: 679 SIMEVAISCLDESPESRPTIQKV 701
+M CL + + RP+ ++
Sbjct: 260 RLM---AECLKKKRDERPSFPRI 279
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 130/286 (45%), Gaps = 42/286 (14%)
Query: 444 IGKGGQGSVYKAE----LPSGE--IVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNI 497
+G+G G V+ AE LP + +VAVK + +++Q+F E + LT ++H++I
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE---ASESARQDFQREAELLTMLQHQHI 82
Query: 498 VKFYGFCSHARHSFIVYEYLEMGSLAMILSN------------DAAAKDLGWTKRMNVIK 545
V+F+G C+ R +V+EY+ G L L + D A LG + + V
Sbjct: 83 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 142
Query: 546 GVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT- 604
V + Y+ F VHRD++++N L+ + DFG ++ + S+++ + G
Sbjct: 143 QVAAGMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMSRDIY--STDYYRVGGRT 197
Query: 605 ---YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNE 660
++ PE K T + DV+SFGV+ E+ GK P + + E
Sbjct: 198 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP--WYQLSNTEAIDCITQGRE 255
Query: 661 MLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
+ PR P ++ +IM C P+ R +I+ V L+
Sbjct: 256 LERPRACPP------EVYAIMR---GCWQREPQQRHSIKDVHARLQ 292
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 130/286 (45%), Gaps = 42/286 (14%)
Query: 444 IGKGGQGSVYKAE----LPSGE--IVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNI 497
+G+G G V+ AE LP + +VAVK + +++Q+F E + LT ++H++I
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE---ASESARQDFQREAELLTMLQHQHI 76
Query: 498 VKFYGFCSHARHSFIVYEYLEMGSLAMILSN------------DAAAKDLGWTKRMNVIK 545
V+F+G C+ R +V+EY+ G L L + D A LG + + V
Sbjct: 77 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 136
Query: 546 GVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT- 604
V + Y+ F VHRD++++N L+ + DFG ++ + S+++ + G
Sbjct: 137 QVAAGMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMSRDIY--STDYYRVGGRT 191
Query: 605 ---YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNE 660
++ PE K T + DV+SFGV+ E+ GK P + + E
Sbjct: 192 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP--WYQLSNTEAIDCITQGRE 249
Query: 661 MLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
+ PR P ++ +IM C P+ R +I+ V L+
Sbjct: 250 LERPRACPP------EVYAIMR---GCWQREPQQRHSIKDVHARLQ 286
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 102/201 (50%), Gaps = 17/201 (8%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQE---FLNEVKTLTGIRHRNIVK 499
IG+G G V A E +G+ VAVKK ++ QQ NEV + H N+V
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKM------DLRKQQRRELLFNEVVIMRDYHHDNVVD 106
Query: 500 FYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCF 559
Y ++V E+LE G+L I+++ ++ T ++V++ ALSY+HN
Sbjct: 107 MYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLR----ALSYLHNQG- 161
Query: 560 PPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVT 619
++HRDI S ++LL + +SDFG + + L GT ++APE+ +
Sbjct: 162 --VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYG 219
Query: 620 EKCDVYSFGVLALEVIKGKHP 640
+ D++S G++ +E+I G+ P
Sbjct: 220 TEVDIWSLGIMVIEMIDGEPP 240
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 125/276 (45%), Gaps = 31/276 (11%)
Query: 441 EHCIGKGGQGSVYKAELPSG----EI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHR 495
+ IG G G VYK L + E+ VA+K + + + +FL E + H
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEK--QRVDFLGEAGIMGQFSHH 106
Query: 496 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMH 555
NI++ G S + I+ EY+E G+L L + + + +++G+ + Y+
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDG--EFSVLQLVGMLRGIAAGMKYLA 164
Query: 556 NDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG---TYGYVAPEL 612
N + VHRD++++N+L++ VSDFG ++ L+ D +G + APE
Sbjct: 165 NMNY---VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA 221
Query: 613 AYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEI--ALNEMLDPRLPTP 669
K T DV+SFG++ EV+ G+ P N E+ A+N+ RLPTP
Sbjct: 222 ISYRKFTSASDVWSFGIVMWEVMTYGERP-------YWELSNHEVMKAINDGF--RLPTP 272
Query: 670 SHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLL 705
D +I ++ + C + RP + +L
Sbjct: 273 ----MDCPSAIYQLMMQCWQQERARRPKFADIVSIL 304
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 29/207 (14%)
Query: 444 IGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQE---FLNEVKTLTGIRHRNIVK 499
IG+G G V A + SG++VAVKK ++ QQ NEV + +H N+V+
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFNEVVIMRDYQHENVVE 81
Query: 500 FYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMN------VIKGVVDALSY 553
Y ++V E+LE G+L I+++ RMN V V+ ALS
Sbjct: 82 MYNSYLVGDELWVVMEFLEGGALTDIVTH----------TRMNEEQIAAVCLAVLQALSV 131
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELA 613
+H ++HRDI S ++LL + +SDFG + + L GT ++APEL
Sbjct: 132 LHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 188
Query: 614 YTMKVTEKCDVYSFGVLALEVIKGKHP 640
+ + D++S G++ +E++ G+ P
Sbjct: 189 SRLPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 29/207 (14%)
Query: 444 IGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQE---FLNEVKTLTGIRHRNIVK 499
IG+G G V A + SG++VAVKK ++ QQ NEV + +H N+V+
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFNEVVIMRDYQHENVVE 92
Query: 500 FYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMN------VIKGVVDALSY 553
Y ++V E+LE G+L I+++ RMN V V+ ALS
Sbjct: 93 MYNSYLVGDELWVVMEFLEGGALTDIVTH----------TRMNEEQIAAVCLAVLQALSV 142
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELA 613
+H ++HRDI S ++LL + +SDFG + + L GT ++APEL
Sbjct: 143 LHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 199
Query: 614 YTMKVTEKCDVYSFGVLALEVIKGKHP 640
+ + D++S G++ +E++ G+ P
Sbjct: 200 SRLPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 29/207 (14%)
Query: 444 IGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQE---FLNEVKTLTGIRHRNIVK 499
IG+G G V A + SG++VAVKK ++ QQ NEV + +H N+V+
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFNEVVIMRDYQHENVVE 90
Query: 500 FYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMN------VIKGVVDALSY 553
Y ++V E+LE G+L I+++ RMN V V+ ALS
Sbjct: 91 MYNSYLVGDELWVVMEFLEGGALTDIVTH----------TRMNEEQIAAVCLAVLQALSV 140
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELA 613
+H ++HRDI S ++LL + +SDFG + + L GT ++APEL
Sbjct: 141 LHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 197
Query: 614 YTMKVTEKCDVYSFGVLALEVIKGKHP 640
+ + D++S G++ +E++ G+ P
Sbjct: 198 SRLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 29/207 (14%)
Query: 444 IGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQE---FLNEVKTLTGIRHRNIVK 499
IG+G G V A + SG++VAVKK ++ QQ NEV + +H N+V+
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFNEVVIMRDYQHENVVE 212
Query: 500 FYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMN------VIKGVVDALSY 553
Y ++V E+LE G+L I+++ RMN V V+ ALS
Sbjct: 213 MYNSYLVGDELWVVMEFLEGGALTDIVTH----------TRMNEEQIAAVCLAVLQALSV 262
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELA 613
+H ++HRDI S ++LL + +SDFG + + L GT ++APEL
Sbjct: 263 LHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 319
Query: 614 YTMKVTEKCDVYSFGVLALEVIKGKHP 640
+ + D++S G++ +E++ G+ P
Sbjct: 320 SRLPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 29/207 (14%)
Query: 444 IGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQE---FLNEVKTLTGIRHRNIVK 499
IG+G G V A + SG++VAVKK ++ QQ NEV + +H N+V+
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFNEVVIMRDYQHENVVE 85
Query: 500 FYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMN------VIKGVVDALSY 553
Y ++V E+LE G+L I+++ RMN V V+ ALS
Sbjct: 86 MYNSYLVGDELWVVMEFLEGGALTDIVTH----------TRMNEEQIAAVCLAVLQALSV 135
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELA 613
+H ++HRDI S ++LL + +SDFG + + L GT ++APEL
Sbjct: 136 LHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 192
Query: 614 YTMKVTEKCDVYSFGVLALEVIKGKHP 640
+ + D++S G++ +E++ G+ P
Sbjct: 193 SRLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 29/207 (14%)
Query: 444 IGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQE---FLNEVKTLTGIRHRNIVK 499
IG+G G V A + SG++VAVKK ++ QQ NEV + +H N+V+
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFNEVVIMRDYQHENVVE 135
Query: 500 FYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMN------VIKGVVDALSY 553
Y ++V E+LE G+L I+++ RMN V V+ ALS
Sbjct: 136 MYNSYLVGDELWVVMEFLEGGALTDIVTH----------TRMNEEQIAAVCLAVLQALSV 185
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELA 613
+H ++HRDI S ++LL + +SDFG + + L GT ++APEL
Sbjct: 186 LHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 242
Query: 614 YTMKVTEKCDVYSFGVLALEVIKGKHP 640
+ + D++S G++ +E++ G+ P
Sbjct: 243 SRLPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 125/274 (45%), Gaps = 37/274 (13%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
IG G G V+ + + VA+K SE ++F+ E + + + H +V+ YG
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE----EDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDA---AAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
C +V+E++E G L+ L AA+ L + + V + ++Y+ C
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC-- 123
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT---YGYVAPELAYTMK 617
++HRD++++N L+ VSDFG +F+ D + GT + +PE+ +
Sbjct: 124 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSR 180
Query: 618 VTEKCDVYSFGVLALEVI-KGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDK 676
+ K DV+SFGVL EV +GK P + N E+ + RL P +
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKIPYE-------NRSNSEVVEDISTGFRLYKP------R 227
Query: 677 LIS--IMEVAISCLDESPESRPTIQK-VSQLLKI 707
L S + ++ C E PE RP + + QL +I
Sbjct: 228 LASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEI 261
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 125/274 (45%), Gaps = 37/274 (13%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
IG G G V+ + + VA+K SE ++F+ E + + + H +V+ YG
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE----EDFIEEAEVMMKLSHPKLVQLYGV 68
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDA---AAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
C +V+E++E G L+ L AA+ L + + V + ++Y+ C
Sbjct: 69 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC-- 121
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT---YGYVAPELAYTMK 617
++HRD++++N L+ VSDFG +F+ D + GT + +PE+ +
Sbjct: 122 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSR 178
Query: 618 VTEKCDVYSFGVLALEVI-KGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDK 676
+ K DV+SFGVL EV +GK P + N E+ + RL P +
Sbjct: 179 YSSKSDVWSFGVLMWEVFSEGKIPYE-------NRSNSEVVEDISTGFRLYKP------R 225
Query: 677 LIS--IMEVAISCLDESPESRPTIQK-VSQLLKI 707
L S + ++ C E PE RP + + QL +I
Sbjct: 226 LASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEI 259
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 31/279 (11%)
Query: 441 EHCIGKGGQGSVYKAELPS----GEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRN 496
E IG G G V + L + VA+K ++EFL+E + H N
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTER--QRREFLSEASIMGQFEHPN 78
Query: 497 IVKFYGFCSHARHSFIVYEYLEMGSLAMILS-NDAAAKDLGWTKRMNVIKGVVDALSYMH 555
I++ G +++ I+ E++E G+L L ND + + + +++G+ + Y+
Sbjct: 79 IIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI---QLVGMLRGIASGMRYLA 135
Query: 556 NDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG-----YVAP 610
+ VHRD++++N+L++ VSDFG ++FL+ +SS+ E + G + AP
Sbjct: 136 EMSY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAP 192
Query: 611 ELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTP 669
E K T D +S+G++ EV+ G+ P N ++ D RLP P
Sbjct: 193 EAIAFRKFTSASDAWSYGIVMWEVMSFGERP-------YWDMSNQDVINAIEQDYRLPPP 245
Query: 670 SHNVQDKLISIMEVAISCLDESPESRPTI-QKVSQLLKI 707
D S+ ++ + C + +RP Q VS L K+
Sbjct: 246 P----DCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 280
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 125/274 (45%), Gaps = 37/274 (13%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
IG G G V+ + + VA+K SE ++F+ E + + + H +V+ YG
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE----EDFIEEAEVMMKLSHPKLVQLYGV 73
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDA---AAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
C +V+E++E G L+ L AA+ L + + V + ++Y+ C
Sbjct: 74 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC-- 126
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT---YGYVAPELAYTMK 617
++HRD++++N L+ VSDFG +F+ D + GT + +PE+ +
Sbjct: 127 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSR 183
Query: 618 VTEKCDVYSFGVLALEVI-KGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDK 676
+ K DV+SFGVL EV +GK P + N E+ + RL P +
Sbjct: 184 YSSKSDVWSFGVLMWEVFSEGKIPYE-------NRSNSEVVEDISTGFRLYKP------R 230
Query: 677 LIS--IMEVAISCLDESPESRPTIQK-VSQLLKI 707
L S + ++ C E PE RP + + QL +I
Sbjct: 231 LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 264
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 118/267 (44%), Gaps = 26/267 (9%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G+G G V+ VA+K P M S + FL E + + +RH +V+ Y
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTM-SPEAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
S +IV EY+ GSL L + K L + +++ + ++Y+ + V
Sbjct: 79 VSE-EPIYIVTEYMNKGSLLDFLKGETG-KYLRLPQLVDMSAQIASGMAYVERMNY---V 133
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT---YGYVAPELAYTMKVTE 620
HRD+ + N+L+ V+DFG A+ + + + W G + APE A + T
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLI--EDNEWTARQGAKFPIKWTAPEAALYGRFTI 191
Query: 621 KCDVYSFGVLALEV-IKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLIS 679
K DV+SFG+L E+ KG+ P N E+ R+P P + S
Sbjct: 192 KSDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPPECPE----S 240
Query: 680 IMEVAISCLDESPESRPTIQKVSQLLK 706
+ ++ C + PE RPT + + L+
Sbjct: 241 LHDLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 126/280 (45%), Gaps = 31/280 (11%)
Query: 436 NDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+D++ + IG G V A P E VA+K+ + L S E L E++ ++ H
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRIN--LEKCQTSMDELLKEIQAMSQCHH 67
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD-----LGWTKRMNVIKGVVD 549
NIV +Y ++V + L GS+ I+ + A + L + +++ V++
Sbjct: 68 PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 127
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLK-----PDSSNWAELAGT 604
L Y+H + +HRD+ + N+LL + ++DFG + FL + GT
Sbjct: 128 GLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 184
Query: 605 YGYVAPELAYTMKVTE-KCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLD 663
++APE+ ++ + K D++SFG+ A+E+ G P L+ D
Sbjct: 185 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQN------D 238
Query: 664 PRLPTPSHNVQDKLI------SIMEVAISCLDESPESRPT 697
P P+ VQDK + S ++ CL + PE RPT
Sbjct: 239 P--PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT 276
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 119/264 (45%), Gaps = 24/264 (9%)
Query: 438 FDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRN 496
F D IG G G+VY A ++ + E+VA+KK Q+ + EV+ L +RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 497 IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHN 556
+++ G +++V EY +GS + +L + K L + V G + L+Y+H+
Sbjct: 116 TIQYRGCYLREHTAWLVMEYC-LGSASDLL--EVHKKPLQEVEIAAVTHGALQGLAYLHS 172
Query: 557 DCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTM 616
++HRD+ + N+LL + DFG+A + P + GT ++APE+ M
Sbjct: 173 HN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX----FVGTPYWMAPEVILAM 225
Query: 617 KVTE---KCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNV 673
+ K DV+S G+ +E+ + K P IA NE +P+
Sbjct: 226 DEGQYDGKVDVWSLGITCIELAERKPP---LFNMNAMSALYHIAQNE-------SPALQS 275
Query: 674 QDKLISIMEVAISCLDESPESRPT 697
SCL + P+ RPT
Sbjct: 276 GHWSEYFRNFVDSCLQKIPQDRPT 299
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 17/201 (8%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQE---FLNEVKTLTGIRHRNIVK 499
IG+G G V A E SG VAVK ++ QQ NEV + +H N+V+
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMM------DLRKQQRRELLFNEVVIMRDYQHFNVVE 106
Query: 500 FYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCF 559
Y +++ E+L+ G+L I+S L + V + V+ AL+Y+H
Sbjct: 107 MYKSYLVGEELWVLMEFLQGGALTDIVSQ----VRLNEEQIATVCEAVLQALAYLHAQG- 161
Query: 560 PPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVT 619
++HRDI S ++LL L+ +SDFG + D L GT ++APE+
Sbjct: 162 --VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYA 219
Query: 620 EKCDVYSFGVLALEVIKGKHP 640
+ D++S G++ +E++ G+ P
Sbjct: 220 TEVDIWSLGIMVIEMVDGEPP 240
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 126/280 (45%), Gaps = 31/280 (11%)
Query: 436 NDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+D++ + IG G V A P E VA+K+ + L S E L E++ ++ H
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRIN--LEKCQTSMDELLKEIQAMSQCHH 72
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD-----LGWTKRMNVIKGVVD 549
NIV +Y ++V + L GS+ I+ + A + L + +++ V++
Sbjct: 73 PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 132
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLK-----PDSSNWAELAGT 604
L Y+H + +HRD+ + N+LL + ++DFG + FL + GT
Sbjct: 133 GLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 189
Query: 605 YGYVAPELAYTMKVTE-KCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLD 663
++APE+ ++ + K D++SFG+ A+E+ G P L+ D
Sbjct: 190 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQN------D 243
Query: 664 PRLPTPSHNVQDKLI------SIMEVAISCLDESPESRPT 697
P P+ VQDK + S ++ CL + PE RPT
Sbjct: 244 P--PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT 281
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 119/264 (45%), Gaps = 24/264 (9%)
Query: 438 FDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRN 496
F D IG G G+VY A ++ + E+VA+KK Q+ + EV+ L +RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 497 IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHN 556
+++ G +++V EY +GS + +L + K L + V G + L+Y+H+
Sbjct: 77 TIQYRGCYLREHTAWLVMEYC-LGSASDLL--EVHKKPLQEVEIAAVTHGALQGLAYLHS 133
Query: 557 DCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTM 616
++HRD+ + N+LL + DFG+A + P + GT ++APE+ M
Sbjct: 134 HN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX----FVGTPYWMAPEVILAM 186
Query: 617 KVTE---KCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNV 673
+ K DV+S G+ +E+ + K P IA NE +P+
Sbjct: 187 DEGQYDGKVDVWSLGITCIELAERKPP---LFNMNAMSALYHIAQNE-------SPALQS 236
Query: 674 QDKLISIMEVAISCLDESPESRPT 697
SCL + P+ RPT
Sbjct: 237 GHWSEYFRNFVDSCLQKIPQDRPT 260
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 7/206 (3%)
Query: 435 TNDFDDEHCIGKGGQGSVYKAELPS-GEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR 493
D++ + IG G G K S G+I+ K+ +E A +Q ++EV L ++
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE-AEKQMLVSEVNLLRELK 63
Query: 494 HRNIVKFYGFCSHARHS--FIVYEYLEMGSLAMILSNDAAAKD-LGWTKRMNVIKGVVDA 550
H NIV++Y ++ +IV EY E G LA +++ + L + V+ + A
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 551 LSYMH--NDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYV 608
L H +D ++HRD+ NV LD + + DFG A+ L D E GT Y+
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYM 183
Query: 609 APELAYTMKVTEKCDVYSFGVLALEV 634
+PE M EK D++S G L E+
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 24/266 (9%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G+G G V+ VA+K P M S + FL E + + IRH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTM-SPEAFLQEAQVMKKIRHEKLVQLYAV 81
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
S +IV EY+ GSL L + K L + +++ + ++Y+ + V
Sbjct: 82 VSE-EPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPELAYTMKVTEK 621
HRD+ + N+L+ V+DFG A+ ++ D+ A + + APE A + T K
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 622 CDVYSFGVLALEV-IKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISI 680
DV+SFG+L E+ KG+ P N E+ R+P P + S+
Sbjct: 196 SDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPPECPE----SL 244
Query: 681 MEVAISCLDESPESRPTIQKVSQLLK 706
++ C + PE RPT + + L+
Sbjct: 245 HDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 7/204 (3%)
Query: 437 DFDDEHCIGKGGQGSVYKAELPS-GEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHR 495
D++ + IG G G K S G+I+ K+ +E A +Q ++EV L ++H
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE-AEKQMLVSEVNLLRELKHP 65
Query: 496 NIVKFYGFCSHARHS--FIVYEYLEMGSLAMILSNDAAAKD-LGWTKRMNVIKGVVDALS 552
NIV++Y ++ +IV EY E G LA +++ + L + V+ + AL
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 553 YMH--NDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAP 610
H +D ++HRD+ NV LD + + DFG A+ L D+S GT Y++P
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSP 185
Query: 611 ELAYTMKVTEKCDVYSFGVLALEV 634
E M EK D++S G L E+
Sbjct: 186 EQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 125/274 (45%), Gaps = 37/274 (13%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
IG G G V+ + + VA+K + S+ +F+ E + + + H +V+ YG
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKT----IKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGV 90
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDA---AAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
C +V+E++E G L+ L AA+ L + + V + ++Y+ C
Sbjct: 91 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC-- 143
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT---YGYVAPELAYTMK 617
++HRD++++N L+ VSDFG +F+ D + GT + +PE+ +
Sbjct: 144 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSR 200
Query: 618 VTEKCDVYSFGVLALEVI-KGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDK 676
+ K DV+SFGVL EV +GK P + N E+ + RL P +
Sbjct: 201 YSSKSDVWSFGVLMWEVFSEGKIPYE-------NRSNSEVVEDISTGFRLYKP------R 247
Query: 677 LIS--IMEVAISCLDESPESRPTIQK-VSQLLKI 707
L S + ++ C E PE RP + + QL +I
Sbjct: 248 LASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEI 281
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 7/204 (3%)
Query: 437 DFDDEHCIGKGGQGSVYKAELPS-GEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHR 495
D++ + IG G G K S G+I+ K+ +E A +Q ++EV L ++H
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE-AEKQMLVSEVNLLRELKHP 65
Query: 496 NIVKFYGFCSHARHS--FIVYEYLEMGSLAMILSNDAAAKD-LGWTKRMNVIKGVVDALS 552
NIV++Y ++ +IV EY E G LA +++ + L + V+ + AL
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 553 YMH--NDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAP 610
H +D ++HRD+ NV LD + + DFG A+ L D+S GT Y++P
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSP 185
Query: 611 ELAYTMKVTEKCDVYSFGVLALEV 634
E M EK D++S G L E+
Sbjct: 186 EQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 120/266 (45%), Gaps = 24/266 (9%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G+G G V+ VA+K P M S + FL E + + +RH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTM-SPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
S +IV EY+ GSL L + K L + +++ + ++Y+ + V
Sbjct: 82 VSE-EPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPELAYTMKVTEK 621
HRD+++ N+L+ V+DFG A+ ++ D+ A + + APE A + T K
Sbjct: 137 HRDLAAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 622 CDVYSFGVLALEV-IKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISI 680
DV+SFG+L E+ KG+ P N E+ R+P P + S+
Sbjct: 196 SDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPPECPE----SL 244
Query: 681 MEVAISCLDESPESRPTIQKVSQLLK 706
++ C + PE RPT + + L+
Sbjct: 245 HDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 119/266 (44%), Gaps = 24/266 (9%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G+G G V+ VA+K P M S + FL E + + +RH +V+ Y
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTM-SPEAFLQEAQVMKKLRHEKLVQLYAV 74
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
S +IV EY+ GSL L + K L + +++ + ++Y+ + V
Sbjct: 75 VSE-EPIYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNY---V 129
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPELAYTMKVTEK 621
HRD+ + N+L+ V+DFG A+ ++ D+ A + + APE A + T K
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIK 188
Query: 622 CDVYSFGVLALEV-IKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISI 680
DV+SFG+L E+ KG+ P N E+ R+P P + S+
Sbjct: 189 SDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPPECPE----SL 237
Query: 681 MEVAISCLDESPESRPTIQKVSQLLK 706
++ C + PE RPT + + L+
Sbjct: 238 HDLMCQCWRKEPEERPTFEYLQAFLE 263
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 129/294 (43%), Gaps = 36/294 (12%)
Query: 433 RVTNDFDDEHC-----IGKGGQGSVYKAELP-----SGEIVAVKKFHSPLPSEMASQQEF 482
R F++ H +GKG GSV +GE+VAVKK + ++F
Sbjct: 5 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDF 61
Query: 483 LNEVKTLTGIRHRNIVKFYGFCSHA--RHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKR 540
E++ L ++H NIVK+ G C A R+ ++ EYL GSL L A A+ + K
Sbjct: 62 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--AHAERIDHIKL 119
Query: 541 MNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAE 600
+ + + Y+ + +HRD++++N+L++ EN + DFG K L D
Sbjct: 120 LQYTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 176
Query: 601 LAGTYG---YVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFXXXXXXXXX 652
+ APE K + DV+SFGV+ E+ K K P +F
Sbjct: 177 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 236
Query: 653 NLEIALN--EML--DPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVS 702
I + E+L + RLP P D++ IM C + + RP+ + ++
Sbjct: 237 GQMIVFHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFRDLA 286
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 119/266 (44%), Gaps = 24/266 (9%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G+G G V+ VA+K P M S + FL E + + +RH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTM-SPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
S +IV EY+ GSL L + K L + +++ + ++Y+ + V
Sbjct: 82 VSE-EPIYIVIEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPELAYTMKVTEK 621
HRD+ + N+L+ V+DFG A+ ++ D+ A + + APE A + T K
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIE-DNEXTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 622 CDVYSFGVLALEV-IKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISI 680
DV+SFG+L E+ KG+ P N E+ R+P P + S+
Sbjct: 196 SDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPPECPE----SL 244
Query: 681 MEVAISCLDESPESRPTIQKVSQLLK 706
++ C + PE RPT + + L+
Sbjct: 245 HDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 124/274 (45%), Gaps = 37/274 (13%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
IG G G V+ + + VA+K SE ++F+ E + + + H +V+ YG
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE----EDFIEEAEVMMKLSHPKLVQLYGV 71
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDA---AAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
C +V E++E G L+ L AA+ L + + V + ++Y+ C
Sbjct: 72 CLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC-- 124
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT---YGYVAPELAYTMK 617
++HRD++++N L+ VSDFG +F+ D + GT + +PE+ +
Sbjct: 125 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSR 181
Query: 618 VTEKCDVYSFGVLALEVI-KGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDK 676
+ K DV+SFGVL EV +GK P + N E+ + RL P +
Sbjct: 182 YSSKSDVWSFGVLMWEVFSEGKIPYE-------NRSNSEVVEDISTGFRLYKP------R 228
Query: 677 LIS--IMEVAISCLDESPESRPTIQK-VSQLLKI 707
L S + ++ C E PE RP + + QL +I
Sbjct: 229 LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 262
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 119/266 (44%), Gaps = 24/266 (9%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G+G G V+ VA+K P M S + FL E + + +RH +V+ Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTM-SPEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
S +IV EY+ GSL L + K L + +++ + ++Y+ + V
Sbjct: 248 VSE-EPIYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNY---V 302
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPELAYTMKVTEK 621
HRD+ + N+L+ V+DFG A+ ++ D+ A + + APE A + T K
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 622 CDVYSFGVLALEV-IKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISI 680
DV+SFG+L E+ KG+ P N E+ R+P P + S+
Sbjct: 362 SDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPPECPE----SL 410
Query: 681 MEVAISCLDESPESRPTIQKVSQLLK 706
++ C + PE RPT + + L+
Sbjct: 411 HDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 119/266 (44%), Gaps = 24/266 (9%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G+G G V+ VA+K P M S + FL E + + +RH +V+ Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTM-SPEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
S +IV EY+ GSL L + K L + +++ + ++Y+ + V
Sbjct: 248 VSE-EPIYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNY---V 302
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPELAYTMKVTEK 621
HRD+ + N+L+ V+DFG A+ ++ D+ A + + APE A + T K
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 622 CDVYSFGVLALEV-IKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISI 680
DV+SFG+L E+ KG+ P N E+ R+P P + S+
Sbjct: 362 SDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPPECPE----SL 410
Query: 681 MEVAISCLDESPESRPTIQKVSQLLK 706
++ C + PE RPT + + L+
Sbjct: 411 HDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 119/266 (44%), Gaps = 24/266 (9%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G+G G V+ VA+K P M S + FL E + + +RH +V+ Y
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTM-SPEAFLQEAQVMKKLRHEKLVQLYAV 70
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
S +IV EY+ GSL L + K L + +++ + ++Y+ + V
Sbjct: 71 VSE-EPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---V 125
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPELAYTMKVTEK 621
HRD+ + N+L+ V+DFG A+ ++ D+ A + + APE A + T K
Sbjct: 126 HRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIK 184
Query: 622 CDVYSFGVLALEV-IKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISI 680
DV+SFG+L E+ KG+ P N E+ R+P P + S+
Sbjct: 185 SDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPPECPE----SL 233
Query: 681 MEVAISCLDESPESRPTIQKVSQLLK 706
++ C + PE RPT + + L+
Sbjct: 234 HDLMCQCWRKDPEERPTFEYLQAFLE 259
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 119/266 (44%), Gaps = 24/266 (9%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G+G G V+ VA+K P M S + FL E + + +RH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTM-SPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
S +IV EY+ GSL L + K L + +++ + ++Y+ + V
Sbjct: 82 VSE-EPIYIVIEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPELAYTMKVTEK 621
HRD+ + N+L+ V+DFG A+ ++ D+ A + + APE A + T K
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 622 CDVYSFGVLALEV-IKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISI 680
DV+SFG+L E+ KG+ P N E+ R+P P + S+
Sbjct: 196 SDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPPECPE----SL 244
Query: 681 MEVAISCLDESPESRPTIQKVSQLLK 706
++ C + PE RPT + + L+
Sbjct: 245 HDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 119/266 (44%), Gaps = 24/266 (9%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G+G G V+ VA+K P M S + FL E + + +RH +V+ Y
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTM-SPEAFLQEAQVMKKLRHEKLVQLYAV 72
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
S +IV EY+ GSL L + K L + +++ + ++Y+ + V
Sbjct: 73 VSE-EPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---V 127
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPELAYTMKVTEK 621
HRD+ + N+L+ V+DFG A+ ++ D+ A + + APE A + T K
Sbjct: 128 HRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 622 CDVYSFGVLALEV-IKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISI 680
DV+SFG+L E+ KG+ P N E+ R+P P + S+
Sbjct: 187 SDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPPECPE----SL 235
Query: 681 MEVAISCLDESPESRPTIQKVSQLLK 706
++ C + PE RPT + + L+
Sbjct: 236 HDLMCQCWRKDPEERPTFEYLQAFLE 261
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 119/266 (44%), Gaps = 24/266 (9%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G+G G V+ VA+K P M S + FL E + + +RH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTM-SPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
S +IV EY+ GSL L + K L + +++ + ++Y+ + V
Sbjct: 82 VSE-EPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPELAYTMKVTEK 621
HRD+ + N+L+ V+DFG A+ ++ D+ A + + APE A + T K
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 622 CDVYSFGVLALEV-IKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISI 680
DV+SFG+L E+ KG+ P N E+ R+P P + S+
Sbjct: 196 SDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPPECPE----SL 244
Query: 681 MEVAISCLDESPESRPTIQKVSQLLK 706
++ C + PE RPT + + L+
Sbjct: 245 HDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 114/276 (41%), Gaps = 40/276 (14%)
Query: 444 IGKGGQGSVYKAELPS-GEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IG+G G V+ L + +VAVK LP ++ ++ FL E + L H NIV+ G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAK--FLQEARILKQYSHPNIVRLIG 179
Query: 503 FCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPI 562
C+ + +IV E ++ G L + A L + ++ + Y+ + C
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGAR--LRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 563 VHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG-----------YVAPE 611
+HRD++++N L+ +N +SDFG ++ E G Y + APE
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSR---------EEADGVYAASGGLRQVPVKWTAPE 285
Query: 612 LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPS 670
+ + + DV+SFG+L E G P N + RLP P
Sbjct: 286 ALNYGRYSSESDVWSFGILLWETFSLGASP-------YPNLSNQQTREFVEKGGRLPCPE 338
Query: 671 HNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
D + +ME C P RP+ + Q L+
Sbjct: 339 L-CPDAVFRLME---QCWAYEPGQRPSFSTIYQELQ 370
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 119/266 (44%), Gaps = 24/266 (9%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G+G G V+ VA+K P M S + FL E + + +RH +V+ Y
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTM-SPEAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
S +IV EY+ GSL L + K L + +++ + ++Y+ + V
Sbjct: 79 VSE-EPIYIVTEYMNKGSLLDFLKGETG-KYLRLPQLVDMSAQIASGMAYVERMNY---V 133
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPELAYTMKVTEK 621
HRD+ + N+L+ V+DFG A+ ++ D+ A + + APE A + T K
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 622 CDVYSFGVLALEV-IKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISI 680
DV+SFG+L E+ KG+ P N E+ R+P P + S+
Sbjct: 193 SDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPPECPE----SL 241
Query: 681 MEVAISCLDESPESRPTIQKVSQLLK 706
++ C + PE RPT + + L+
Sbjct: 242 HDLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 119/266 (44%), Gaps = 24/266 (9%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G+G G V+ VA+K P M S + FL E + + +RH +V+ Y
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTM-SPEAFLQEAQVMKKLRHEKLVQLYAV 330
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
S +IV EY+ GSL L + K L + +++ + ++Y+ + V
Sbjct: 331 VSE-EPIYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNY---V 385
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPELAYTMKVTEK 621
HRD+ + N+L+ V+DFG A+ ++ D+ A + + APE A + T K
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIK 444
Query: 622 CDVYSFGVLALEV-IKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISI 680
DV+SFG+L E+ KG+ P N E+ R+P P + S+
Sbjct: 445 SDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPPECPE----SL 493
Query: 681 MEVAISCLDESPESRPTIQKVSQLLK 706
++ C + PE RPT + + L+
Sbjct: 494 HDLMCQCWRKEPEERPTFEYLQAFLE 519
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 119/266 (44%), Gaps = 24/266 (9%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G+G G V+ VA+K P M S + FL E + + +RH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTM-SPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
S +IV EY+ GSL L + K L + +++ + ++Y+ + V
Sbjct: 82 VSE-EPIYIVCEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPELAYTMKVTEK 621
HRD+ + N+L+ V+DFG A+ ++ D+ A + + APE A + T K
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 622 CDVYSFGVLALEV-IKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISI 680
DV+SFG+L E+ KG+ P N E+ R+P P + S+
Sbjct: 196 SDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPPECPE----SL 244
Query: 681 MEVAISCLDESPESRPTIQKVSQLLK 706
++ C + PE RPT + + L+
Sbjct: 245 HDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 119/266 (44%), Gaps = 24/266 (9%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G+G G V+ VA+K P M S + FL E + + +RH +V+ Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTM-SPEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
S +IV EY+ GSL L + K L + +++ + ++Y+ + V
Sbjct: 248 VSE-EPIYIVGEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNY---V 302
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPELAYTMKVTEK 621
HRD+ + N+L+ V+DFG A+ ++ D+ A + + APE A + T K
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 622 CDVYSFGVLALEV-IKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISI 680
DV+SFG+L E+ KG+ P N E+ R+P P + S+
Sbjct: 362 SDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPPECPE----SL 410
Query: 681 MEVAISCLDESPESRPTIQKVSQLLK 706
++ C + PE RPT + + L+
Sbjct: 411 HDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 127/279 (45%), Gaps = 31/279 (11%)
Query: 441 EHCIGKGGQGSVYKAELPS----GEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRN 496
E IG G G V + L + VA+K ++EFL+E + H N
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTER--QRREFLSEASIMGQFEHPN 76
Query: 497 IVKFYGFCSHARHSFIVYEYLEMGSLAMILS-NDAAAKDLGWTKRMNVIKGVVDALSYMH 555
I++ G +++ I+ E++E G+L L ND + + + +++G+ + Y+
Sbjct: 77 IIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI---QLVGMLRGIASGMRYLA 133
Query: 556 NDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG-----YVAP 610
+ VHRD++++N+L++ VSDFG ++FL+ +SS+ + G + AP
Sbjct: 134 EMSY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAP 190
Query: 611 ELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTP 669
E K T D +S+G++ EV+ G+ P N ++ D RLP P
Sbjct: 191 EAIAFRKFTSASDAWSYGIVMWEVMSFGERP-------YWDMSNQDVINAIEQDYRLPPP 243
Query: 670 SHNVQDKLISIMEVAISCLDESPESRPTI-QKVSQLLKI 707
D S+ ++ + C + +RP Q VS L K+
Sbjct: 244 P----DCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 278
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 119/264 (45%), Gaps = 21/264 (7%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G G G V+ + VAVK P M S Q FL E + ++H +V+ Y
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLK---PGTM-SVQAFLEEANLMKTLQHDKLVRLYAV 76
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+ +I+ EY+ GSL L +D K L K ++ + + ++Y+ + +
Sbjct: 77 VTREEPIYIITEYMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIERKNY---I 132
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG-TYGYVAPELAYTMKVTEKC 622
HRD+ + NVL+ ++DFG A+ ++ + E A + APE T K
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 192
Query: 623 DVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISIM 681
DV+SFG+L E++ GK P ++ AL++ R+P N D+L IM
Sbjct: 193 DVWSFGILLYEIVTYGKIP-----YPGRTNADVMTALSQGY--RMPR-VENCPDELYDIM 244
Query: 682 EVAISCLDESPESRPTIQKVSQLL 705
++ C E E RPT + +L
Sbjct: 245 KM---CWKEKAEERPTFDYLQSVL 265
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 118/266 (44%), Gaps = 24/266 (9%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G+G G V+ VA+K P M S + FL E + + +RH +V+ Y
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTM-SPEAFLQEAQVMKKLRHEKLVQLYAV 71
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
S IV EY+ GSL L + K L + +++ + ++Y+ + V
Sbjct: 72 VSE-EPIXIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNY---V 126
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPELAYTMKVTEK 621
HRD+ + N+L+ V+DFG A+ ++ D+ A + + APE A + T K
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLARLIE-DNEXTARQGAKFPIKWTAPEAALYGRFTIK 185
Query: 622 CDVYSFGVLALEV-IKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISI 680
DV+SFG+L E+ KG+ P N E+ R+P P + S+
Sbjct: 186 SDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPPECPE----SL 234
Query: 681 MEVAISCLDESPESRPTIQKVSQLLK 706
++ C + PE RPT + + L+
Sbjct: 235 HDLMCQCWRKEPEERPTFEYLQAFLE 260
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 103/214 (48%), Gaps = 30/214 (14%)
Query: 443 CIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
C+GKG G V++ GE VAVK F S + E N V +RH NI+ F
Sbjct: 44 CVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVM----LRHENILGFIA 98
Query: 503 FCSHARHS----FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDC 558
+RHS +++ Y EMGSL L L + ++ + L+++H +
Sbjct: 99 SDMTSRHSSTQLWLITHYHEMGSLYDYLQ----LTTLDTVSCLRIVLSIASGLAHLHIEI 154
Query: 559 F-----PPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELA-----GTYGYV 608
F P I HRD+ SKN+L+ + ++D G A + S+N ++ GT Y+
Sbjct: 155 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYM 213
Query: 609 APE-LAYTMKVT-----EKCDVYSFGVLALEVIK 636
APE L T++V ++ D+++FG++ EV +
Sbjct: 214 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEVAR 247
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 105/223 (47%), Gaps = 30/223 (13%)
Query: 434 VTNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR 493
V D C+GKG G V++ GE VAVK F S + E N V +R
Sbjct: 6 VARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVM----LR 60
Query: 494 HRNIVKFYGFCSHARHS----FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVD 549
H NI+ F +RHS +++ Y EMGSL L L + ++ +
Sbjct: 61 HENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ----LTTLDTVSCLRIVLSIAS 116
Query: 550 ALSYMHNDCF-----PPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELA-- 602
L+++H + F P I HRD+ SKN+L+ + ++D G A + S+N ++
Sbjct: 117 GLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNN 175
Query: 603 ---GTYGYVAPE-LAYTMKVT-----EKCDVYSFGVLALEVIK 636
GT Y+APE L T++V ++ D+++FG++ EV +
Sbjct: 176 PRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVAR 218
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 122/271 (45%), Gaps = 36/271 (13%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
IG G G V+ + + VA+K SE ++F+ E + + + H +V+ YG
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE----EDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDA---AAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
C +V+E++E G L+ L AA+ L + + V + ++Y+
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEE---A 122
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT---YGYVAPELAYTMK 617
++HRD++++N L+ VSDFG +F+ D + GT + +PE+ +
Sbjct: 123 SVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSR 180
Query: 618 VTEKCDVYSFGVLALEVI-KGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDK 676
+ K DV+SFGVL EV +GK P + N E+ + RL P +
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKIPYE-------NRSNSEVVEDISTGFRLYKP------R 227
Query: 677 LIS--IMEVAISCLDESPESRPTIQKVSQLL 705
L S + ++ C E PE RP ++ + L
Sbjct: 228 LASTHVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 131/303 (43%), Gaps = 38/303 (12%)
Query: 424 GKIVYEEIIRVTNDFDDEHC-----IGKGGQGSVYKAELP-----SGEIVAVKKFHSPLP 473
G + +E+ R F++ H +GKG GSV +GE+VAVKK
Sbjct: 1 GAMAFED--RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE 58
Query: 474 SEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHA--RHSFIVYEYLEMGSLAMILSNDAA 531
+ ++F E++ L ++H NIVK+ G C A R+ ++ EYL GSL L
Sbjct: 59 EHL---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE 115
Query: 532 AKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFL 591
D K + + + Y+ + +HRD++++N+L++ EN + DFG K L
Sbjct: 116 RID--HIKLLQYTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVL 170
Query: 592 KPDSSNWAELAGTYG---YVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDF 643
D + APE K + DV+SFGV+ E+ K K P +F
Sbjct: 171 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEF 230
Query: 644 XXXXXXXXXNLEIALN--EML--DPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQ 699
I + E+L + RLP P D++ IM C + + RP+ +
Sbjct: 231 MRMIGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFR 286
Query: 700 KVS 702
++
Sbjct: 287 DLA 289
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 93/194 (47%), Gaps = 14/194 (7%)
Query: 442 HCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFY 501
IGKG G V + G VAVK + A+ Q FL E +T +RH N+V+
Sbjct: 12 QTIGKGEFGDVMLGDY-RGNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLL 65
Query: 502 GFCSHARHS-FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
G + +IV EY+ GSL L + + LG + V +A+ Y+ + F
Sbjct: 66 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNNF- 123
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTE 620
VHRD++++NVL+ +N A VSDFG K SS + APE K +
Sbjct: 124 --VHRDLAARNVLVSEDNVAKVSDFG---LTKEASSTQDTGKLPVKWTAPEALREKKFST 178
Query: 621 KCDVYSFGVLALEV 634
K DV+SFG+L E+
Sbjct: 179 KSDVWSFGILLWEI 192
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 118/266 (44%), Gaps = 24/266 (9%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G+G G V+ VA+K P M S + FL E + + +RH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTM-SPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
S +IV EY+ G L L + K L + +++ + ++Y+ + V
Sbjct: 82 VSE-EPIYIVMEYMSKGCLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPELAYTMKVTEK 621
HRD+ + N+L+ V+DFG A+ ++ D+ A + + APE A + T K
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 622 CDVYSFGVLALEV-IKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISI 680
DV+SFG+L E+ KG+ P N E+ R+P P + S+
Sbjct: 196 SDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPPECPE----SL 244
Query: 681 MEVAISCLDESPESRPTIQKVSQLLK 706
++ C + PE RPT + + L+
Sbjct: 245 HDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 127/295 (43%), Gaps = 36/295 (12%)
Query: 432 IRVTNDFDDEHC-----IGKGGQGSVYKAELP-----SGEIVAVKKFHSPLPSEMASQQE 481
+R F++ H +GKG GSV +GE+VAVKK + ++
Sbjct: 1 MRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RD 57
Query: 482 FLNEVKTLTGIRHRNIVKFYGFCSHA--RHSFIVYEYLEMGSLAMILSNDAAAKDLGWTK 539
F E++ L ++H NIVK+ G C A R+ ++ EYL GSL L D K
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID--HIK 115
Query: 540 RMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWA 599
+ + + Y+ + +HRD++++N+L++ EN + DFG K L D
Sbjct: 116 LLQYTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 172
Query: 600 ELAGTYG---YVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFXXXXXXXX 651
+ APE K + DV+SFGV+ E+ K K P +F
Sbjct: 173 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK 232
Query: 652 XNLEIALN--EML--DPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVS 702
I + E+L + RLP P D++ IM C + + RP+ + ++
Sbjct: 233 QGQMIVFHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFRDLA 283
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 118/266 (44%), Gaps = 24/266 (9%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G+G G V+ VA+K P M S + FL E + + +RH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTM-SPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
S +IV EY+ G L L + K L + +++ + ++Y+ + V
Sbjct: 82 VSE-EPIYIVTEYMSKGCLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPELAYTMKVTEK 621
HRD+ + N+L+ V+DFG A+ ++ D+ A + + APE A + T K
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 622 CDVYSFGVLALEV-IKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISI 680
DV+SFG+L E+ KG+ P N E+ R+P P + S+
Sbjct: 196 SDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPPECPE----SL 244
Query: 681 MEVAISCLDESPESRPTIQKVSQLLK 706
++ C + PE RPT + + L+
Sbjct: 245 HDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 118/266 (44%), Gaps = 24/266 (9%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G+G G V+ VA+K P M S + FL E + + +RH +V+ Y
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGNM-SPEAFLQEAQVMKKLRHEKLVQLYAV 248
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
S +IV EY+ GSL L + K L + +++ + ++Y+ + V
Sbjct: 249 VSE-EPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---V 303
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPELAYTMKVTEK 621
HRD+ + N+L+ V+DFG + ++ D+ A + + APE A + T K
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGRLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIK 362
Query: 622 CDVYSFGVLALEV-IKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISI 680
DV+SFG+L E+ KG+ P N E+ R+P P + S+
Sbjct: 363 SDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPPECPE----SL 411
Query: 681 MEVAISCLDESPESRPTIQKVSQLLK 706
++ C + PE RPT + + L+
Sbjct: 412 HDLMCQCWRKDPEERPTFEYLQAFLE 437
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 6/207 (2%)
Query: 437 DFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHR 495
DF + +GKG VY+AE + +G VA+K + Q NEVK ++H
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 496 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMH 555
+I++ Y + + + ++V E G + L N K + + + ++ + Y+H
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKN--RVKPFSENEARHFMHQIITGMLYLH 129
Query: 556 NDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT 615
+ I+HRD++ N+LL ++DFG A LK L GT Y++PE+A
Sbjct: 130 SH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATR 186
Query: 616 MKVTEKCDVYSFGVLALEVIKGKHPRD 642
+ DV+S G + ++ G+ P D
Sbjct: 187 SAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 103/214 (48%), Gaps = 30/214 (14%)
Query: 443 CIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
C+GKG G V++ GE VAVK F S + E N V +RH NI+ F
Sbjct: 15 CVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVM----LRHENILGFIA 69
Query: 503 FCSHARHS----FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDC 558
+RHS +++ Y EMGSL L L + ++ + L+++H +
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQ----LTTLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 559 F-----PPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELA-----GTYGYV 608
F P I HRD+ SKN+L+ + ++D G A + S+N ++ GT Y+
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 609 APE-LAYTMKVT-----EKCDVYSFGVLALEVIK 636
APE L T++V ++ D+++FG++ EV +
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEVAR 218
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 131/307 (42%), Gaps = 36/307 (11%)
Query: 420 LSFEGKIVYEEIIRVTNDFDDEHC-----IGKGGQGSVYKAELP-----SGEIVAVKKFH 469
L F+G + R F++ H +GKG GSV +GE+VAVKK
Sbjct: 20 LYFQGAMGSAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ 79
Query: 470 SPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHA--RHSFIVYEYLEMGSLAMILS 527
+ ++F E++ L ++H NIVK+ G C A R+ ++ EYL GSL L
Sbjct: 80 HSTEEHL---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ 136
Query: 528 NDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGT 587
D K + + + Y+ + +HRD++++N+L++ EN + DFG
Sbjct: 137 KHKERID--HIKLLQYTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGL 191
Query: 588 AKFLKPDSSNWAELAGTYG---YVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH- 639
K L D + APE K + DV+SFGV+ E+ K K
Sbjct: 192 TKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 251
Query: 640 PRDFXXXXXXXXXNLEIALN--EML--DPRLPTPSHNVQDKLISIMEVAISCLDESPESR 695
P +F I + E+L + RLP P D++ IM C + + R
Sbjct: 252 PAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQR 307
Query: 696 PTIQKVS 702
P+ + ++
Sbjct: 308 PSFRDLA 314
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 115/270 (42%), Gaps = 28/270 (10%)
Query: 444 IGKGGQGSVYKAELPS-GEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IG+G G V+ L + +VAVK LP ++ ++ FL E + L H NIV+ G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAK--FLQEARILKQYSHPNIVRLIG 179
Query: 503 FCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPI 562
C+ + +IV E ++ G L + A L + ++ + Y+ + C
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGAR--LRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 563 VHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG-----TYGYVAPELAYTMK 617
+HRD++++N L+ +N +SDFG + + ++ +G + APE +
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMS---REEADGVXAASGGLRQVPVKWTAPEALNYGR 291
Query: 618 VTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDK 676
+ + DV+SFG+L E G P N + RLP P D
Sbjct: 292 YSSESDVWSFGILLWETFSLGASP-------YPNLSNQQTREFVEKGGRLPCPEL-CPDA 343
Query: 677 LISIMEVAISCLDESPESRPTIQKVSQLLK 706
+ +ME C P RP+ + Q L+
Sbjct: 344 VFRLME---QCWAYEPGQRPSFSTIYQELQ 370
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 126/271 (46%), Gaps = 22/271 (8%)
Query: 441 EHCIGKGGQGSVY--KAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIV 498
+ +G G G V + +LPS + ++V + +++FL E + H NI+
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 499 KFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDC 558
+ G + ++ IV EY+E GSL L A + + + +++G+ + Y+ +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYLSDMG 167
Query: 559 FPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG---TYGYVAPELAYT 615
F VHRD++++N+L++ VSDFG ++ L+ D G + +PE
Sbjct: 168 F---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 616 MKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQ 674
K T DV+S+G++ EV+ G+ P ++ A++E RLP P
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERP-----YWEMSNQDVIKAVDEGY--RLPPP----M 273
Query: 675 DKLISIMEVAISCLDESPESRPTIQKVSQLL 705
D ++ ++ + C + +RP +++ +L
Sbjct: 274 DCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 93/194 (47%), Gaps = 14/194 (7%)
Query: 442 HCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFY 501
IGKG G V + G VAVK + A+ Q FL E +T +RH N+V+
Sbjct: 27 QTIGKGEFGDVMLGDY-RGNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLL 80
Query: 502 GFCSHARHS-FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
G + +IV EY+ GSL L + + LG + V +A+ Y+ + F
Sbjct: 81 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNNF- 138
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTE 620
VHRD++++NVL+ +N A VSDFG K SS + APE K +
Sbjct: 139 --VHRDLAARNVLVSEDNVAKVSDFG---LTKEASSTQDTGKLPVKWTAPEALREKKFST 193
Query: 621 KCDVYSFGVLALEV 634
K DV+SFG+L E+
Sbjct: 194 KSDVWSFGILLWEI 207
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 126/271 (46%), Gaps = 22/271 (8%)
Query: 441 EHCIGKGGQGSVY--KAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIV 498
+ +G G G V + +LPS + ++V + +++FL E + H NI+
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 499 KFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDC 558
+ G + ++ IV EY+E GSL L A + + + +++G+ + Y+ +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYLSDMG 167
Query: 559 FPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG---TYGYVAPELAYT 615
+ VHRD++++N+L++ VSDFG A+ L+ D G + +PE
Sbjct: 168 Y---VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 616 MKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQ 674
K T DV+S+G++ EV+ G+ P ++ A++E RLP P
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERP-----YWEMSNQDVIKAVDEGY--RLPPP----M 273
Query: 675 DKLISIMEVAISCLDESPESRPTIQKVSQLL 705
D ++ ++ + C + +RP +++ +L
Sbjct: 274 DCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 122/278 (43%), Gaps = 31/278 (11%)
Query: 444 IGKGGQGSVYKAELP-----SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIV 498
+GKG GSV +GE+VAVKK + ++F E++ L ++H NIV
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 74
Query: 499 KFYGFCSHA--RHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHN 556
K+ G C A R+ ++ EYL GSL L D K + + + Y+
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID--HIKLLQYTSQICKGMEYLGT 132
Query: 557 DCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG---YVAPELA 613
+ +HRD++++N+L++ EN + DFG K L D + + APE
Sbjct: 133 KRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESL 189
Query: 614 YTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFXXXXXXXXXNLEIALN--EML--DP 664
K + DV+SFGV+ E+ K K P +F I + E+L +
Sbjct: 190 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 249
Query: 665 RLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVS 702
RLP P D++ IM C + + RP+ + ++
Sbjct: 250 RLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFRDLA 283
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 11/209 (5%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELPSGEIVAVKK--FHSPLPSEMASQQEFLNEVKTLTGIR 493
+DFD +GKG G+VY A + + K F S L E Q E++ + +R
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ-LRREIEIQSHLR 73
Query: 494 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSY 553
H NI++ Y + + +++ E+ G L L + + ++ + DAL Y
Sbjct: 74 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE---QRSATFMEELADALHY 130
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELA 613
H ++HRDI +N+L+ + E ++DFG + + S + GT Y+ PE+
Sbjct: 131 CHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMI 185
Query: 614 YTMKVTEKCDVYSFGVLALEVIKGKHPRD 642
EK D++ GVL E + G P D
Sbjct: 186 EGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 126/294 (42%), Gaps = 36/294 (12%)
Query: 433 RVTNDFDDEHC-----IGKGGQGSVYKAELP-----SGEIVAVKKFHSPLPSEMASQQEF 482
R F++ H +GKG GSV +GE+VAVKK + ++F
Sbjct: 9 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDF 65
Query: 483 LNEVKTLTGIRHRNIVKFYGFCSHA--RHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKR 540
E++ L ++H NIVK+ G C A R+ ++ EYL GSL L D K
Sbjct: 66 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID--HIKL 123
Query: 541 MNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAE 600
+ + + Y+ + +HRD++++N+L++ EN + DFG K L D
Sbjct: 124 LQYTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 180
Query: 601 LAGTYG---YVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFXXXXXXXXX 652
+ APE K + DV+SFGV+ E+ K K P +F
Sbjct: 181 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 240
Query: 653 NLEIALN--EML--DPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVS 702
I + E+L + RLP P D++ IM C + + RP+ + ++
Sbjct: 241 GQMIVFHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFRDLA 290
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 125/289 (43%), Gaps = 36/289 (12%)
Query: 438 FDDEHC-----IGKGGQGSVYKAELP-----SGEIVAVKKFHSPLPSEMASQQEFLNEVK 487
F++ H +GKG GSV +GE+VAVKK + ++F E++
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIE 81
Query: 488 TLTGIRHRNIVKFYGFCSHA--RHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIK 545
L ++H NIVK+ G C A R+ ++ EYL GSL L D K +
Sbjct: 82 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID--HIKLLQYTS 139
Query: 546 GVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY 605
+ + Y+ + +HRD++++N+L++ EN + DFG K L D
Sbjct: 140 QICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 196
Query: 606 G---YVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFXXXXXXXXXNLEIA 657
+ APE K + DV+SFGV+ E+ K K P +F I
Sbjct: 197 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 256
Query: 658 LN--EML--DPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVS 702
+ E+L + RLP P D++ IM C + + RP+ + ++
Sbjct: 257 FHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFRDLA 301
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 11/209 (5%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELPSGEIVAVKK--FHSPLPSEMASQQEFLNEVKTLTGIR 493
+DFD +GKG G+VY A + + K F S L E Q E++ + +R
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ-LRREIEIQSHLR 72
Query: 494 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSY 553
H NI++ Y + + +++ E+ G L L + + ++ + DAL Y
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE---QRSATFMEELADALHY 129
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELA 613
H ++HRDI +N+L+ + E ++DFG + + S + GT Y+ PE+
Sbjct: 130 CHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMI 184
Query: 614 YTMKVTEKCDVYSFGVLALEVIKGKHPRD 642
EK D++ GVL E + G P D
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 125/289 (43%), Gaps = 36/289 (12%)
Query: 438 FDDEHC-----IGKGGQGSVYKAELP-----SGEIVAVKKFHSPLPSEMASQQEFLNEVK 487
F++ H +GKG GSV +GE+VAVKK + ++F E++
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIE 81
Query: 488 TLTGIRHRNIVKFYGFCSHA--RHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIK 545
L ++H NIVK+ G C A R+ ++ EYL GSL L D K +
Sbjct: 82 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID--HIKLLQYTS 139
Query: 546 GVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY 605
+ + Y+ + +HRD++++N+L++ EN + DFG K L D
Sbjct: 140 QICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 196
Query: 606 G---YVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFXXXXXXXXXNLEIA 657
+ APE K + DV+SFGV+ E+ K K P +F I
Sbjct: 197 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 256
Query: 658 LN--EML--DPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVS 702
+ E+L + RLP P D++ IM C + + RP+ + ++
Sbjct: 257 FHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFRDLA 301
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 126/294 (42%), Gaps = 36/294 (12%)
Query: 433 RVTNDFDDEHC-----IGKGGQGSVYKAELP-----SGEIVAVKKFHSPLPSEMASQQEF 482
R F++ H +GKG GSV +GE+VAVKK + ++F
Sbjct: 1 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDF 57
Query: 483 LNEVKTLTGIRHRNIVKFYGFCSHA--RHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKR 540
E++ L ++H NIVK+ G C A R+ ++ EYL GSL L D K
Sbjct: 58 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID--HIKL 115
Query: 541 MNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAE 600
+ + + Y+ + +HRD++++N+L++ EN + DFG K L D
Sbjct: 116 LQYTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 172
Query: 601 LAGTYG---YVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFXXXXXXXXX 652
+ APE K + DV+SFGV+ E+ K K P +F
Sbjct: 173 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 232
Query: 653 NLEIALN--EML--DPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVS 702
I + E+L + RLP P D++ IM C + + RP+ + ++
Sbjct: 233 GQMIVFHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFRDLA 282
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 126/294 (42%), Gaps = 36/294 (12%)
Query: 433 RVTNDFDDEHC-----IGKGGQGSVYKAELP-----SGEIVAVKKFHSPLPSEMASQQEF 482
R F++ H +GKG GSV +GE+VAVKK + ++F
Sbjct: 5 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDF 61
Query: 483 LNEVKTLTGIRHRNIVKFYGFCSHA--RHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKR 540
E++ L ++H NIVK+ G C A R+ ++ EYL GSL L D K
Sbjct: 62 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID--HIKL 119
Query: 541 MNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAE 600
+ + + Y+ + +HRD++++N+L++ EN + DFG K L D
Sbjct: 120 LQYTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 176
Query: 601 LAGTYG---YVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFXXXXXXXXX 652
+ APE K + DV+SFGV+ E+ K K P +F
Sbjct: 177 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 236
Query: 653 NLEIALN--EML--DPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVS 702
I + E+L + RLP P D++ IM C + + RP+ + ++
Sbjct: 237 GQMIVFHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFRDLA 286
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 93/192 (48%), Gaps = 14/192 (7%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
IGKG G V + G VAVK + A+ Q FL E +T +RH N+V+ G
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLGV 254
Query: 504 CSHARHS-FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPI 562
+ +IV EY+ GSL L + + LG + V +A+ Y+ + F
Sbjct: 255 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNNF--- 310
Query: 563 VHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKC 622
VHRD++++NVL+ +N A VSDFG K SS + APE K + K
Sbjct: 311 VHRDLAARNVLVSEDNVAKVSDFG---LTKEASSTQDTGKLPVKWTAPEALREKKFSTKS 367
Query: 623 DVYSFGVLALEV 634
DV+SFG+L E+
Sbjct: 368 DVWSFGILLWEI 379
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 11/209 (5%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELPSGEIVAVKK--FHSPLPSEMASQQEFLNEVKTLTGIR 493
+DFD +GKG G+VY A + + K F S L E Q E++ + +R
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ-LRREIEIQSHLR 72
Query: 494 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSY 553
H NI++ Y + + +++ E+ G L L + + ++ + DAL Y
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE---QRSATFMEELADALHY 129
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELA 613
H ++HRDI +N+L+ + E ++DFG + + S + GT Y+ PE+
Sbjct: 130 CHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMI 184
Query: 614 YTMKVTEKCDVYSFGVLALEVIKGKHPRD 642
EK D++ GVL E + G P D
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 124/275 (45%), Gaps = 28/275 (10%)
Query: 441 EHCIGKGGQGSVYKA--ELPSGE--IVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRN 496
E IG G G V +LP VA+K S + +++FL+E + H N
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEK--QRRDFLSEASIMGQFDHPN 95
Query: 497 IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHN 556
++ G + + I+ E++E GSL L + + + + +++G+ + Y+ +
Sbjct: 96 VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV--IQLVGMLRGIAAGMKYLAD 153
Query: 557 DCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG-----YVAPE 611
+ VHRD++++N+L++ VSDFG ++FL+ D+S+ + G + APE
Sbjct: 154 MNY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 210
Query: 612 LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPS 670
K T DV+S+G++ EV+ G+ P N ++ D RLP P
Sbjct: 211 AIQYRKFTSASDVWSYGIVMWEVMSYGERP-------YWDMTNQDVINAIEQDYRLPPP- 262
Query: 671 HNVQDKLISIMEVAISCLDESPESRPTIQKVSQLL 705
D ++ ++ + C + RP ++ L
Sbjct: 263 ---MDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL 294
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 126/294 (42%), Gaps = 36/294 (12%)
Query: 433 RVTNDFDDEHC-----IGKGGQGSVYKAELP-----SGEIVAVKKFHSPLPSEMASQQEF 482
R F++ H +GKG GSV +GE+VAVKK + ++F
Sbjct: 6 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDF 62
Query: 483 LNEVKTLTGIRHRNIVKFYGFCSHA--RHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKR 540
E++ L ++H NIVK+ G C A R+ ++ EYL GSL L D K
Sbjct: 63 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID--HIKL 120
Query: 541 MNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAE 600
+ + + Y+ + +HRD++++N+L++ EN + DFG K L D
Sbjct: 121 LQYTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 177
Query: 601 LAGTYG---YVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFXXXXXXXXX 652
+ APE K + DV+SFGV+ E+ K K P +F
Sbjct: 178 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 237
Query: 653 NLEIALN--EML--DPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVS 702
I + E+L + RLP P D++ IM C + + RP+ + ++
Sbjct: 238 GQMIVFHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFRDLA 287
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 126/294 (42%), Gaps = 36/294 (12%)
Query: 433 RVTNDFDDEHC-----IGKGGQGSVYKAELP-----SGEIVAVKKFHSPLPSEMASQQEF 482
R F++ H +GKG GSV +GE+VAVKK + ++F
Sbjct: 7 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDF 63
Query: 483 LNEVKTLTGIRHRNIVKFYGFCSHA--RHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKR 540
E++ L ++H NIVK+ G C A R+ ++ EYL GSL L D K
Sbjct: 64 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID--HIKL 121
Query: 541 MNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAE 600
+ + + Y+ + +HRD++++N+L++ EN + DFG K L D
Sbjct: 122 LQYTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 178
Query: 601 LAGTYG---YVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFXXXXXXXXX 652
+ APE K + DV+SFGV+ E+ K K P +F
Sbjct: 179 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 238
Query: 653 NLEIALN--EML--DPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVS 702
I + E+L + RLP P D++ IM C + + RP+ + ++
Sbjct: 239 GQMIVFHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFRDLA 288
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 121/278 (43%), Gaps = 31/278 (11%)
Query: 444 IGKGGQGSVYKAELP-----SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIV 498
+GKG GSV +GE+VAVKK + ++F E++ L ++H NIV
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 74
Query: 499 KFYGFCSHA--RHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHN 556
K+ G C A R+ ++ EYL GSL L D K + + + Y+
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID--HIKLLQYTSQICKGMEYLGT 132
Query: 557 DCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG---YVAPELA 613
+ +HRD++++N+L++ EN + DFG K L D + APE
Sbjct: 133 KRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 614 YTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFXXXXXXXXXNLEIALN--EML--DP 664
K + DV+SFGV+ E+ K K P +F I + E+L +
Sbjct: 190 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 249
Query: 665 RLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVS 702
RLP P D++ IM C + + RP+ + ++
Sbjct: 250 RLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFRDLA 283
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 121/278 (43%), Gaps = 31/278 (11%)
Query: 444 IGKGGQGSVYKAELP-----SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIV 498
+GKG GSV +GE+VAVKK + ++F E++ L ++H NIV
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 72
Query: 499 KFYGFCSHA--RHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHN 556
K+ G C A R+ ++ EYL GSL L D K + + + Y+
Sbjct: 73 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID--HIKLLQYTSQICKGMEYLGT 130
Query: 557 DCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG---YVAPELA 613
+ +HRD++++N+L++ EN + DFG K L D + APE
Sbjct: 131 KRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 187
Query: 614 YTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFXXXXXXXXXNLEIALN--EML--DP 664
K + DV+SFGV+ E+ K K P +F I + E+L +
Sbjct: 188 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 247
Query: 665 RLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVS 702
RLP P D++ IM C + + RP+ + ++
Sbjct: 248 RLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFRDLA 281
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 127/294 (43%), Gaps = 36/294 (12%)
Query: 433 RVTNDFDDEHC-----IGKGGQGSVYKAELP-----SGEIVAVKKFHSPLPSEMASQQEF 482
R F++ H +GKG GSV +GE+VAVKK + ++F
Sbjct: 3 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDF 59
Query: 483 LNEVKTLTGIRHRNIVKFYGFCSHA--RHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKR 540
E++ L ++H NIVK+ G C A R+ ++ EYL GSL L D K
Sbjct: 60 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID--HIKL 117
Query: 541 MNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAE 600
+ + + Y+ + +HR+++++N+L++ EN + DFG K L D +
Sbjct: 118 LQYTSQICKGMEYLGTKRY---IHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKV 174
Query: 601 LAGTYG---YVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFXXXXXXXXX 652
+ APE K + DV+SFGV+ E+ K K P +F
Sbjct: 175 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 234
Query: 653 NLEIALN--EML--DPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVS 702
I + E+L + RLP P D++ IM C + + RP+ + ++
Sbjct: 235 GQMIVFHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFRDLA 284
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 133/294 (45%), Gaps = 31/294 (10%)
Query: 427 VYEEIIRVTNDFDDE---------HCIGKGGQGSVY--KAELPSGEIVAVKKFHSPLPSE 475
YE+ + ++F E +G G G V + +LPS + ++V +
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 476 MASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDL 535
+++FL E + H NI++ G + ++ IV EY+E GSL L A +
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 146
Query: 536 GWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDS 595
+ + +++G+ + Y+ + + VHRD++++N+L++ VSDFG ++ L+ D
Sbjct: 147 --IQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 596 SNWAELAG---TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXX 651
G + +PE K T DV+S+G++ EV+ G+ P
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-----YWEMSN 256
Query: 652 XNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLL 705
++ A++E RLP P D ++ ++ + C + +RP +++ +L
Sbjct: 257 QDVIKAVDEGY--RLPPP----MDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 126/271 (46%), Gaps = 22/271 (8%)
Query: 441 EHCIGKGGQGSVY--KAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIV 498
+ +G G G V + +LPS + ++V + +++FL E + H NI+
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 499 KFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDC 558
+ G + ++ IV EY+E GSL L A + + + +++G+ + Y+ +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYLSDMG 167
Query: 559 FPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG---TYGYVAPELAYT 615
+ VHRD++++N+L++ VSDFG ++ L+ D G + +PE
Sbjct: 168 Y---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 616 MKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQ 674
K T DV+S+G++ EV+ G+ P ++ A++E RLP P
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERP-----YWEMSNQDVIKAVDEGY--RLPPP----M 273
Query: 675 DKLISIMEVAISCLDESPESRPTIQKVSQLL 705
D ++ ++ + C + +RP +++ +L
Sbjct: 274 DCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 126/271 (46%), Gaps = 22/271 (8%)
Query: 441 EHCIGKGGQGSVY--KAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIV 498
+ +G G G V + +LPS + ++V + +++FL E + H NI+
Sbjct: 38 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 97
Query: 499 KFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDC 558
+ G + ++ IV EY+E GSL L A + + + +++G+ + Y+ +
Sbjct: 98 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYLSDMG 155
Query: 559 FPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG---TYGYVAPELAYT 615
+ VHRD++++N+L++ VSDFG ++ L+ D G + +PE
Sbjct: 156 Y---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 212
Query: 616 MKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQ 674
K T DV+S+G++ EV+ G+ P ++ A++E RLP P
Sbjct: 213 RKFTSASDVWSYGIVLWEVMSYGERP-----YWEMSNQDVIKAVDEGY--RLPPP----M 261
Query: 675 DKLISIMEVAISCLDESPESRPTIQKVSQLL 705
D ++ ++ + C + +RP +++ +L
Sbjct: 262 DCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 292
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 92/194 (47%), Gaps = 14/194 (7%)
Query: 442 HCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFY 501
IGKG G V + G VAVK + A+ Q FL E +T +RH N+V+
Sbjct: 18 QTIGKGEFGDVMLGDY-RGNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLL 71
Query: 502 GFCSHARHS-FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
G + +IV EY+ GSL L + + LG + V +A+ Y+ + F
Sbjct: 72 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNNF- 129
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTE 620
VHRD++++NVL+ +N A VSDFG K SS + APE +
Sbjct: 130 --VHRDLAARNVLVSEDNVAKVSDFG---LTKEASSTQDTGKLPVKWTAPEALREAAFST 184
Query: 621 KCDVYSFGVLALEV 634
K DV+SFG+L E+
Sbjct: 185 KSDVWSFGILLWEI 198
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 126/271 (46%), Gaps = 22/271 (8%)
Query: 441 EHCIGKGGQGSVY--KAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIV 498
+ +G G G V + +LPS + ++V + +++FL E + H NI+
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 499 KFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDC 558
+ G + ++ IV EY+E GSL L A + + + +++G+ + Y+ +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYLSDMG 167
Query: 559 FPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG---TYGYVAPELAYT 615
+ VHRD++++N+L++ VSDFG ++ L+ D G + +PE
Sbjct: 168 Y---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 616 MKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQ 674
K T DV+S+G++ EV+ G+ P ++ A++E RLP P
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERP-----YWEMSNQDVIKAVDEGY--RLPPP----M 273
Query: 675 DKLISIMEVAISCLDESPESRPTIQKVSQLL 705
D ++ ++ + C + +RP +++ +L
Sbjct: 274 DCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 125/271 (46%), Gaps = 22/271 (8%)
Query: 441 EHCIGKGGQGSVY--KAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIV 498
+ +G G G V + +LPS + ++V + +++FL E + H NI+
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 499 KFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDC 558
+ G + ++ IV EY+E GSL L A + + + +++G+ + Y+ +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYLSDMG 167
Query: 559 FPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG---TYGYVAPELAYT 615
+ VHRD++++N+L++ VSDFG + L+ D G + +PE
Sbjct: 168 Y---VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 616 MKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQ 674
K T DV+S+G++ EV+ G+ P ++ A++E RLP P
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERP-----YWEMSNQDVIKAVDEGY--RLPPP----M 273
Query: 675 DKLISIMEVAISCLDESPESRPTIQKVSQLL 705
D ++ ++ + C + +RP +++ +L
Sbjct: 274 DCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 133/294 (45%), Gaps = 31/294 (10%)
Query: 427 VYEEIIRVTNDFDDE---------HCIGKGGQGSVY--KAELPSGEIVAVKKFHSPLPSE 475
YE+ + ++F E +G G G V + +LPS + ++V +
Sbjct: 25 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 84
Query: 476 MASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDL 535
+++FL E + H NI++ G + ++ IV EY+E GSL L A +
Sbjct: 85 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 144
Query: 536 GWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDS 595
+ + +++G+ + Y+ + + VHRD++++N+L++ VSDFG ++ L+ D
Sbjct: 145 --IQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 199
Query: 596 SNWAELAG---TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXX 651
G + +PE K T DV+S+G++ EV+ G+ P
Sbjct: 200 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-----YWEMSN 254
Query: 652 XNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLL 705
++ A++E RLP P D ++ ++ + C + +RP +++ +L
Sbjct: 255 QDVIKAVDEGY--RLPPP----MDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 302
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 133/294 (45%), Gaps = 31/294 (10%)
Query: 427 VYEEIIRVTNDFDDE---------HCIGKGGQGSVY--KAELPSGEIVAVKKFHSPLPSE 475
YE+ + ++F E +G G G V + +LPS + ++V +
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 476 MASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDL 535
+++FL E + H NI++ G + ++ IV EY+E GSL L A +
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 146
Query: 536 GWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDS 595
+ + +++G+ + Y+ + + VHRD++++N+L++ VSDFG ++ L+ D
Sbjct: 147 --IQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 596 SNWAELAG---TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXX 651
G + +PE K T DV+S+G++ EV+ G+ P
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-----YWEMSN 256
Query: 652 XNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLL 705
++ A++E RLP P D ++ ++ + C + +RP +++ +L
Sbjct: 257 QDVIKAVDEGY--RLPPP----MDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 126/294 (42%), Gaps = 36/294 (12%)
Query: 433 RVTNDFDDEHC-----IGKGGQGSVYKAELP-----SGEIVAVKKFHSPLPSEMASQQEF 482
R F++ H +GKG GSV +GE+VAVKK + ++F
Sbjct: 5 RDPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDF 61
Query: 483 LNEVKTLTGIRHRNIVKFYGFCSHA--RHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKR 540
E++ L ++H NIVK+ G C A R+ ++ E+L GSL L D K
Sbjct: 62 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERID--HIKL 119
Query: 541 MNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAE 600
+ + + Y+ + +HRD++++N+L++ EN + DFG K L D
Sbjct: 120 LQYTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 176
Query: 601 LAGTYG---YVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFXXXXXXXXX 652
+ APE K + DV+SFGV+ E+ K K P +F
Sbjct: 177 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 236
Query: 653 NLEIALN--EML--DPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVS 702
I + E+L + RLP P D++ IM C + + RP+ + ++
Sbjct: 237 GQMIVFHLIELLKNNGRLPRPD-GCPDEIYMIM---TECWNNNVNQRPSFRDLA 286
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 121/277 (43%), Gaps = 34/277 (12%)
Query: 441 EHCIGKGGQGSVY--------KAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI 492
E IG G G V K ELP VA+K + +++FL E +
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELP----VAIKTLKVGYTEK--QRRDFLGEASIMGQF 80
Query: 493 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALS 552
H NI+ G + ++ IV EY+E GSL L + + + + +++G+ +
Sbjct: 81 DHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTV--IQLVGMLRGISAGMK 138
Query: 553 YMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG---TYGYVA 609
Y+ + + VHRD++++N+L++ VSDFG ++ L+ D G + A
Sbjct: 139 YLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTA 195
Query: 610 PELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPT 668
PE K T DV+S+G++ EV+ G+ P N ++ RLP+
Sbjct: 196 PEAIAFRKFTSASDVWSYGIVMWEVVSYGERP-------YWEMTNQDVIKAVEEGYRLPS 248
Query: 669 PSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLL 705
P D ++ ++ + C + SRP ++ +L
Sbjct: 249 P----MDCPAALYQLMLDCWQKERNSRPKFDEIVNML 281
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 126/271 (46%), Gaps = 22/271 (8%)
Query: 441 EHCIGKGGQGSVY--KAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIV 498
+ +G G G V + +LPS + ++V + +++FL E + H NI+
Sbjct: 21 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 499 KFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDC 558
+ G + ++ IV EY+E GSL L A + + + +++G+ + Y+ +
Sbjct: 81 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYLSDMG 138
Query: 559 FPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG---TYGYVAPELAYT 615
+ VHRD++++N+L++ VSDFG ++ L+ D G + +PE
Sbjct: 139 Y---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 195
Query: 616 MKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQ 674
K T DV+S+G++ EV+ G+ P ++ A++E RLP P
Sbjct: 196 RKFTSASDVWSYGIVLWEVMSYGERP-----YWEMSNQDVIKAVDEGY--RLPPP----M 244
Query: 675 DKLISIMEVAISCLDESPESRPTIQKVSQLL 705
D ++ ++ + C + +RP +++ +L
Sbjct: 245 DCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 14/202 (6%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
IG G G+VYK + V + +P P ++ Q F NEV L RH NI+ F G+
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 72
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
S A IV ++ E SL L ++ K +++ + + Y+H I+
Sbjct: 73 -STAPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---II 126
Query: 564 HRDISSKNVLLDLENEAHVSDFG--TAKFLKPDSSNWAELAGTYGYVAPELAYTMK---V 618
HRD+ S N+ L + + DFG T K S + +L+G+ ++APE+
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 619 TEKCDVYSFGVLALEVIKGKHP 640
+ + DVY+FG++ E++ G+ P
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLP 208
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 116/259 (44%), Gaps = 21/259 (8%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IGKG G V+K + + ++VA+K L ++ E+ L+ + K+YG
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 503 FCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPI 562
+I+ EYL GS +L A + ++K ++ L Y+H++
Sbjct: 89 SYLKGSKLWIIMEYLGGGSALDLLR----AGPFDEFQIATMLKEILKGLDYLHSE---KK 141
Query: 563 VHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKC 622
+HRDI + NVLL + + ++DFG A L GT ++APE+ K
Sbjct: 142 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKA 201
Query: 623 DVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISIME 682
D++S G+ A+E+ KG+ P ++ L P+ P+ V D S E
Sbjct: 202 DIWSLGITAIELAKGEPPN----------SDMHPMRVLFLIPKNNPPTL-VGDFTKSFKE 250
Query: 683 VAISCLDESPESRPTIQKV 701
+CL++ P RPT +++
Sbjct: 251 FIDACLNKDPSFRPTAKEL 269
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
IG G G+VYK + V + +P P ++ Q F NEV L RH NI+ F G+
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 77
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+ + + IV ++ E SL L ++ K +++ + + Y+H I+
Sbjct: 78 STKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---II 131
Query: 564 HRDISSKNVLLDLENEAHVSDFG--TAKFLKPDSSNWAELAGTYGYVAPELAYTMK---V 618
HRD+ S N+ L + + DFG T K S + +L+G+ ++APE+
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 619 TEKCDVYSFGVLALEVIKGKHP 640
+ + DVY+FG++ E++ G+ P
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLP 213
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
IG G G+VYK + V + +P P ++ Q F NEV L RH NI+ F G+
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 72
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+ + + IV ++ E SL L ++ K +++ + + Y+H I+
Sbjct: 73 STKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---II 126
Query: 564 HRDISSKNVLLDLENEAHVSDFG--TAKFLKPDSSNWAELAGTYGYVAPELAYTMK---V 618
HRD+ S N+ L + + DFG T K S + +L+G+ ++APE+
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 619 TEKCDVYSFGVLALEVIKGKHP 640
+ + DVY+FG++ E++ G+ P
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLP 208
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
IG G G+VYK + V + +P P ++ Q F NEV L RH NI+ F G+
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 74
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+ + + IV ++ E SL L ++ K +++ + + Y+H I+
Sbjct: 75 STKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---II 128
Query: 564 HRDISSKNVLLDLENEAHVSDFG--TAKFLKPDSSNWAELAGTYGYVAPELAYTMK---V 618
HRD+ S N+ L + + DFG T K S + +L+G+ ++APE+
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 188
Query: 619 TEKCDVYSFGVLALEVIKGKHP 640
+ + DVY+FG++ E++ G+ P
Sbjct: 189 SFQSDVYAFGIVLYELMTGQLP 210
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
IG G G+VYK + V + +P P ++ Q F NEV L RH NI+ F G+
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 77
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+ + + IV ++ E SL L ++ K +++ + + Y+H I+
Sbjct: 78 STKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---II 131
Query: 564 HRDISSKNVLLDLENEAHVSDFG--TAKFLKPDSSNWAELAGTYGYVAPELAYTMK---V 618
HRD+ S N+ L + + DFG T K S + +L+G+ ++APE+
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 619 TEKCDVYSFGVLALEVIKGKHP 640
+ + DVY+FG++ E++ G+ P
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLP 213
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 107/248 (43%), Gaps = 34/248 (13%)
Query: 420 LSFEGKI----------VYEEIIRVTNDFDDE---------HCIGKGGQGSVYKAEL--P 458
L F+GK+ YEE R F E IG G G V L P
Sbjct: 14 LYFQGKLPEPQFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVP 73
Query: 459 SGE--IVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEY 516
VA+K + +++FL+E + H NI++ G + R + IV EY
Sbjct: 74 GQRDVPVAIKALKAGYTER--QRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEY 131
Query: 517 LEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDL 576
+E GSL L + + + +++GV + Y+ + + VHRD++++NVL+D
Sbjct: 132 MENGSLDTFLRTHDGQFTI--MQLVGMLRGVGAGMRYLSDLGY---VHRDLAARNVLVDS 186
Query: 577 ENEAHVSDFGTAKFLKPDSSNWAELAG---TYGYVAPELAYTMKVTEKCDVYSFGVLALE 633
VSDFG ++ L+ D G + APE + DV+SFGV+ E
Sbjct: 187 NLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWE 246
Query: 634 VIK-GKHP 640
V+ G+ P
Sbjct: 247 VLAYGERP 254
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 136/295 (46%), Gaps = 32/295 (10%)
Query: 420 LSFEGKIVYEEIIRVTNDFDDEHCIGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMAS 478
L F+G Y++ D +H +G G G VY+ + VAVK L +
Sbjct: 10 LYFQGSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT----LKEDTME 65
Query: 479 QQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWT 538
+EFL E + I+H N+V+ G C+ +I+ E++ G+L L + +++
Sbjct: 66 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAV 124
Query: 539 KRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNW 598
+ + + A+ Y+ F +HRD++++N L+ + V+DFG ++ + D+
Sbjct: 125 VLLYMATQISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT- 180
Query: 599 AELAGTY--GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNL 654
A + + APE LAY K + K DV++FGVL E+ G P +
Sbjct: 181 AHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----------YPGI 229
Query: 655 EIA-LNEML--DPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
+++ + E+L D R+ P +K+ +M +C +P RP+ ++ Q +
Sbjct: 230 DLSQVYELLEKDYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFE 280
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 120/267 (44%), Gaps = 22/267 (8%)
Query: 441 EHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
E +G G G V+ A VAVK P M S + FL E + ++H +VK
Sbjct: 20 EKKLGAGQFGEVWMATYNKHTKVAVKTMK---PGSM-SVEAFLAEANVMKTLQHDKLVKL 75
Query: 501 YGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ + +I+ E++ GSL L +D +K K ++ + + ++++ +
Sbjct: 76 HAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQRNY- 132
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG-TYGYVAPELAYTMKVT 619
+HRD+ + N+L+ ++DFG A+ ++ + E A + APE T
Sbjct: 133 --IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFT 190
Query: 620 EKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLI 678
K DV+SFG+L +E++ G+ P N E+ R+P P N ++L
Sbjct: 191 IKSDVWSFGILLMEIVTYGRIP-------YPGMSNPEVIRALERGYRMPRP-ENCPEELY 242
Query: 679 SIMEVAISCLDESPESRPTIQKVSQLL 705
+IM + C PE RPT + + +L
Sbjct: 243 NIM---MRCWKNRPEERPTFEYIQSVL 266
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 109/250 (43%), Gaps = 38/250 (15%)
Query: 420 LSFEGKI----------VYEEIIRVTNDFDDE---------HCIGKGGQGSVYKAEL--P 458
L F+GK+ YEE R F E IG G G V L P
Sbjct: 14 LYFQGKLPEPQFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVP 73
Query: 459 SGE--IVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEY 516
VA+K + +++FL+E + H NI++ G + R + IV EY
Sbjct: 74 GQRDVPVAIKALKAGYTER--QRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEY 131
Query: 517 LEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDL 576
+E GSL L + + + +++GV + Y+ + + VHRD++++NVL+D
Sbjct: 132 MENGSLDTFLRTHDGQFTI--MQLVGMLRGVGAGMRYLSDLGY---VHRDLAARNVLVDS 186
Query: 577 ENEAHVSDFGTAKFLKPDSSNWAELAGTYG-----YVAPELAYTMKVTEKCDVYSFGVLA 631
VSDFG ++ L+ D A T G + APE + DV+SFGV+
Sbjct: 187 NLVCKVSDFGLSRVLEDDPD--AAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVM 244
Query: 632 LEVIK-GKHP 640
EV+ G+ P
Sbjct: 245 WEVLAYGERP 254
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 93/199 (46%), Gaps = 8/199 (4%)
Query: 444 IGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G GG +VY AE I VA+K P + + + F EV + + H+NIV
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 503 FCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPI 562
++V EY+E +L+ + + L +N ++D + + H+ I
Sbjct: 79 VDEEDDCYYLVMEYIEGPTLSEYIESHGP---LSVDTAINFTNQILDGIKHAHD---MRI 132
Query: 563 VHRDISSKNVLLDLENEAHVSDFGTAKFLKPDS-SNWAELAGTYGYVAPELAYTMKVTEK 621
VHRDI +N+L+D + DFG AK L S + + GT Y +PE A E
Sbjct: 133 VHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDEC 192
Query: 622 CDVYSFGVLALEVIKGKHP 640
D+YS G++ E++ G+ P
Sbjct: 193 TDIYSIGIVLYEMLVGEPP 211
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
IG G G+VYK + V + +P P ++ Q F NEV L RH NI+ F G+
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 72
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+ + + IV ++ E SL L ++ K +++ + + Y+H I+
Sbjct: 73 STKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---II 126
Query: 564 HRDISSKNVLLDLENEAHVSDFG--TAKFLKPDSSNWAELAGTYGYVAPELAYTMK---V 618
HRD+ S N+ L + + DFG T K S + +L+G+ ++APE+
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 619 TEKCDVYSFGVLALEVIKGKHP 640
+ + DVY+FG++ E++ G+ P
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLP 208
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
IG G G+VYK + V + +P P ++ Q F NEV L RH NI+ F G+
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 99
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+ + + IV ++ E SL L ++ K +++ + + Y+H I+
Sbjct: 100 STKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---II 153
Query: 564 HRDISSKNVLLDLENEAHVSDFG--TAKFLKPDSSNWAELAGTYGYVAPELAYTMK---V 618
HRD+ S N+ L + + DFG T K S + +L+G+ ++APE+
Sbjct: 154 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 213
Query: 619 TEKCDVYSFGVLALEVIKGKHP 640
+ + DVY+FG++ E++ G+ P
Sbjct: 214 SFQSDVYAFGIVLYELMTGQLP 235
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 118/266 (44%), Gaps = 24/266 (9%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G G G V+ VAVK L S FL E + ++H+ +V+ Y
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKS----LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+ +I+ EY+E GSL L + K L K +++ + + ++++ + +
Sbjct: 77 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 131
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPELAYTMKVTEK 621
HRD+ + N+L+ ++DFG A+ ++ D+ A + + APE T K
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIE-DAEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 622 CDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISI 680
DV+SFG+L E++ G+ P N E+ N R+ P N ++L +
Sbjct: 191 SDVWSFGILLTEIVTHGRIP-------YPGMTNPEVIQNLERGYRMVRPD-NCPEELYQL 242
Query: 681 MEVAISCLDESPESRPTIQKVSQLLK 706
M + C E PE RPT + +L+
Sbjct: 243 MRL---CWKERPEDRPTFDYLRSVLE 265
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
IG G G+VYK + V + +P P ++ Q F NEV L RH NI+ F G+
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 100
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+ + + IV ++ E SL L ++ K +++ + + Y+H I+
Sbjct: 101 STKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---II 154
Query: 564 HRDISSKNVLLDLENEAHVSDFG--TAKFLKPDSSNWAELAGTYGYVAPELAYTMK---V 618
HRD+ S N+ L + + DFG T K S + +L+G+ ++APE+
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 619 TEKCDVYSFGVLALEVIKGKHP 640
+ + DVY+FG++ E++ G+ P
Sbjct: 215 SFQSDVYAFGIVLYELMTGQLP 236
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 120/267 (44%), Gaps = 22/267 (8%)
Query: 441 EHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
E +G G G V+ A VAVK P M S + FL E + ++H +VK
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMK---PGSM-SVEAFLAEANVMKTLQHDKLVKL 248
Query: 501 YGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ + +I+ E++ GSL L +D +K K ++ + + ++++ +
Sbjct: 249 HAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQRNY- 305
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG-TYGYVAPELAYTMKVT 619
+HRD+ + N+L+ ++DFG A+ ++ + E A + APE T
Sbjct: 306 --IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFT 363
Query: 620 EKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLI 678
K DV+SFG+L +E++ G+ P N E+ R+P P N ++L
Sbjct: 364 IKSDVWSFGILLMEIVTYGRIP-------YPGMSNPEVIRALERGYRMPRP-ENCPEELY 415
Query: 679 SIMEVAISCLDESPESRPTIQKVSQLL 705
+IM + C PE RPT + + +L
Sbjct: 416 NIM---MRCWKNRPEERPTFEYIQSVL 439
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 22/265 (8%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G G G V+ VAVK L S FL E + ++H+ +V+ Y
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKS----LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+ +I+ EY+E GSL L + K L K +++ + + ++++ + +
Sbjct: 77 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 131
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG-TYGYVAPELAYTMKVTEKC 622
HRD+ + N+L+ ++DFG A+ ++ + E A + APE T K
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 623 DVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISIM 681
DV+SFG+L E++ G+ P N E+ N R+ P N ++L +M
Sbjct: 192 DVWSFGILLTEIVTHGRIP-------YPGMTNPEVIQNLERGYRMVRPD-NCPEELYQLM 243
Query: 682 EVAISCLDESPESRPTIQKVSQLLK 706
+ C E PE RPT + +L+
Sbjct: 244 RL---CWKERPEDRPTFDYLRSVLE 265
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
IG G G+VYK + V + +P P ++ Q F NEV L RH NI+ F G+
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 92
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+ + + IV ++ E SL L ++ K +++ + + Y+H I+
Sbjct: 93 STKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---II 146
Query: 564 HRDISSKNVLLDLENEAHVSDFG--TAKFLKPDSSNWAELAGTYGYVAPELAYTMK---V 618
HRD+ S N+ L + + DFG T K S + +L+G+ ++APE+
Sbjct: 147 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 206
Query: 619 TEKCDVYSFGVLALEVIKGKHP 640
+ + DVY+FG++ E++ G+ P
Sbjct: 207 SFQSDVYAFGIVLYELMTGQLP 228
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 22/265 (8%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G G G V+ VAVK L S FL E + ++H+ +V+ Y
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKS----LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 78
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+ +I+ EY+E GSL L + K L K +++ + + ++++ + +
Sbjct: 79 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 133
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG-TYGYVAPELAYTMKVTEKC 622
HRD+ + N+L+ ++DFG A+ ++ + E A + APE T K
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 193
Query: 623 DVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISIM 681
DV+SFG+L E++ G+ P N E+ N R+ P N ++L +M
Sbjct: 194 DVWSFGILLTEIVTHGRIP-------YPGMTNPEVIQNLERGYRMVRPD-NCPEELYQLM 245
Query: 682 EVAISCLDESPESRPTIQKVSQLLK 706
+ C E PE RPT + +L+
Sbjct: 246 RL---CWKERPEDRPTFDYLRSVLE 267
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 22/265 (8%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G G G V+ VAVK L S FL E + ++H+ +V+ Y
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKS----LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 77
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+ +I+ EY+E GSL L + K L K +++ + + ++++ + +
Sbjct: 78 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 132
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG-TYGYVAPELAYTMKVTEKC 622
HRD+ + N+L+ ++DFG A+ ++ + E A + APE T K
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 192
Query: 623 DVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISIM 681
DV+SFG+L E++ G+ P N E+ N R+ P N ++L +M
Sbjct: 193 DVWSFGILLTEIVTHGRIP-------YPGMTNPEVIQNLERGYRMVRPD-NCPEELYQLM 244
Query: 682 EVAISCLDESPESRPTIQKVSQLLK 706
+ C E PE RPT + +L+
Sbjct: 245 RL---CWKERPEDRPTFDYLRSVLE 266
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
IG G G+VYK + V + +P P ++ Q F NEV L RH NI+ F G+
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 100
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+ + + IV ++ E SL L ++ K +++ + + Y+H I+
Sbjct: 101 STKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---II 154
Query: 564 HRDISSKNVLLDLENEAHVSDFG--TAKFLKPDSSNWAELAGTYGYVAPELAYTMK---V 618
HRD+ S N+ L + + DFG T K S + +L+G+ ++APE+
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 619 TEKCDVYSFGVLALEVIKGKHP 640
+ + DVY+FG++ E++ G+ P
Sbjct: 215 SFQSDVYAFGIVLYELMTGQLP 236
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 22/265 (8%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G G G V+ VAVK L S FL E + ++H+ +V+ Y
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKS----LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 85
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+ +I+ EY+E GSL L + K L K +++ + + ++++ + +
Sbjct: 86 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 140
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG-TYGYVAPELAYTMKVTEKC 622
HRD+ + N+L+ ++DFG A+ ++ + E A + APE T K
Sbjct: 141 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 200
Query: 623 DVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISIM 681
DV+SFG+L E++ G+ P N E+ N R+ P N ++L +M
Sbjct: 201 DVWSFGILLTEIVTHGRIP-------YPGMTNPEVIQNLERGYRMVRPD-NCPEELYQLM 252
Query: 682 EVAISCLDESPESRPTIQKVSQLLK 706
+ C E PE RPT + +L+
Sbjct: 253 RL---CWKERPEDRPTFDYLRSVLE 274
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 22/265 (8%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G G G V+ VAVK L S FL E + ++H+ +V+ Y
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKS----LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 71
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+ +I+ EY+E GSL L + K L K +++ + + ++++ + +
Sbjct: 72 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 126
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG-TYGYVAPELAYTMKVTEKC 622
HRD+ + N+L+ ++DFG A+ ++ + E A + APE T K
Sbjct: 127 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 186
Query: 623 DVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISIM 681
DV+SFG+L E++ G+ P N E+ N R+ P N ++L +M
Sbjct: 187 DVWSFGILLTEIVTHGRIP-------YPGMTNPEVIQNLERGYRMVRPD-NCPEELYQLM 238
Query: 682 EVAISCLDESPESRPTIQKVSQLLK 706
+ C E PE RPT + +L+
Sbjct: 239 RL---CWKERPEDRPTFDYLRSVLE 260
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 113/278 (40%), Gaps = 40/278 (14%)
Query: 444 IGKGGQGSVYKAEL--PSGEIV--AVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVK 499
+G G G V + E PSG+ V AVK + S+ + +F+ EV + + HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 500 FYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCF 559
YG +V E +GSL L LG R V V + + Y+ + F
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF 132
Query: 560 PPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWA---ELAGTYGYVAPELAYTM 616
+HRD++++N+LL + + DFG + L + ++ + + APE T
Sbjct: 133 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 617 KVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALN--------EMLDPRLP 667
+ D + FGV E+ G+ P I LN + RLP
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEP--------------WIGLNGSQILHKIDKEGERLP 235
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLL 705
P QD I V + C PE RPT + L
Sbjct: 236 RPEDCPQD----IYNVMVQCWAHKPEDRPTFVALRDFL 269
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 22/265 (8%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G G G V+ VAVK L S FL E + ++H+ +V+ Y
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKS----LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+ +I+ EY+E GSL L + K L K +++ + + ++++ + +
Sbjct: 77 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 131
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG-TYGYVAPELAYTMKVTEKC 622
HRD+ + N+L+ ++DFG A+ ++ + E A + APE T K
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 623 DVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISIM 681
DV+SFG+L E++ G+ P N E+ N R+ P N ++L +M
Sbjct: 192 DVWSFGILLTEIVTHGRIP-------YPGMTNPEVIQNLERGYRMVRPD-NCPEELYQLM 243
Query: 682 EVAISCLDESPESRPTIQKVSQLLK 706
+ C E PE RPT + +L+
Sbjct: 244 RL---CWKERPEDRPTFDYLRSVLE 265
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 119/264 (45%), Gaps = 21/264 (7%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G G G V+ + VAVK P M S Q FL E + ++H +V+ Y
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLK---PGTM-SVQAFLEEANLMKTLQHDKLVRLYAV 75
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+ +I+ E++ GSL L +D K L K ++ + + ++Y+ + +
Sbjct: 76 VTKEEPIYIITEFMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIERKNY---I 131
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG-TYGYVAPELAYTMKVTEKC 622
HRD+ + NVL+ ++DFG A+ ++ + E A + APE T K
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 191
Query: 623 DVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISIM 681
+V+SFG+L E++ GK P ++ AL++ R+P N D+L IM
Sbjct: 192 NVWSFGILLYEIVTYGKIP-----YPGRTNADVMSALSQGY--RMPR-MENCPDELYDIM 243
Query: 682 EVAISCLDESPESRPTIQKVSQLL 705
++ C E E RPT + +L
Sbjct: 244 KM---CWKEKAEERPTFDYLQSVL 264
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 124/274 (45%), Gaps = 28/274 (10%)
Query: 441 EHCIGKGGQGSVYKAELP---SGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRN 496
E IG G G V L EI VA+K + + +++FL+E + H N
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDK--QRRDFLSEASIMGQFDHPN 70
Query: 497 IVKFYGFCSHARHSFIVYEYLEMGSL-AMILSNDAAAKDLGWTKRMNVIKGVVDALSYMH 555
I+ G + + I+ EY+E GSL A + ND + + + +++G+ + Y+
Sbjct: 71 IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI---QLVGMLRGIGSGMKYLS 127
Query: 556 NDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG---TYGYVAPEL 612
+ + VHRD++++N+L++ VSDFG ++ L+ D G + APE
Sbjct: 128 DMSY---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 184
Query: 613 AYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSH 671
K T DV+S+G++ EV+ G+ P ++ A+ E RLP P
Sbjct: 185 IAYRKFTSASDVWSYGIVMWEVMSYGERP-----YWDMSNQDVIKAIEEGY--RLPPP-- 235
Query: 672 NVQDKLISIMEVAISCLDESPESRPTIQKVSQLL 705
D I++ ++ + C + RP ++ +L
Sbjct: 236 --MDCPIALHQLMLDCWQKERSDRPKFGQIVNML 267
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 113/278 (40%), Gaps = 40/278 (14%)
Query: 444 IGKGGQGSVYKAEL--PSGEIV--AVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVK 499
+G G G V + E PSG+ V AVK + S+ + +F+ EV + + HRN+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 500 FYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCF 559
YG +V E +GSL L LG R V V + + Y+ + F
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF 136
Query: 560 PPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWA---ELAGTYGYVAPELAYTM 616
+HRD++++N+LL + + DFG + L + ++ + + APE T
Sbjct: 137 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 617 KVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALN--------EMLDPRLP 667
+ D + FGV E+ G+ P I LN + RLP
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEP--------------WIGLNGSQILHKIDKEGERLP 239
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLL 705
P QD I V + C PE RPT + L
Sbjct: 240 RPEDCPQD----IYNVMVQCWAHKPEDRPTFVALRDFL 273
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 113/278 (40%), Gaps = 40/278 (14%)
Query: 444 IGKGGQGSVYKAEL--PSGEIV--AVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVK 499
+G G G V + E PSG+ V AVK + S+ + +F+ EV + + HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 500 FYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCF 559
YG +V E +GSL L LG R V V + + Y+ + F
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF 132
Query: 560 PPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWA---ELAGTYGYVAPELAYTM 616
+HRD++++N+LL + + DFG + L + ++ + + APE T
Sbjct: 133 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 617 KVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALN--------EMLDPRLP 667
+ D + FGV E+ G+ P I LN + RLP
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEP--------------WIGLNGSQILHKIDKEGERLP 235
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLL 705
P QD I V + C PE RPT + L
Sbjct: 236 RPEDCPQD----IYNVMVQCWAHKPEDRPTFVALRDFL 269
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 22/265 (8%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G G G V+ VAVK L S FL E + ++H+ +V+ Y
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKS----LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 84
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+ +I+ EY+E GSL L + K L K +++ + + ++++ + +
Sbjct: 85 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 139
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG-TYGYVAPELAYTMKVTEKC 622
HRD+ + N+L+ ++DFG A+ ++ + E A + APE T K
Sbjct: 140 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 199
Query: 623 DVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISIM 681
DV+SFG+L E++ G+ P N E+ N R+ P N ++L +M
Sbjct: 200 DVWSFGILLTEIVTHGRIP-------YPGMTNPEVIQNLERGYRMVRPD-NCPEELYQLM 251
Query: 682 EVAISCLDESPESRPTIQKVSQLLK 706
+ C E PE RPT + +L+
Sbjct: 252 RL---CWKERPEDRPTFDYLRSVLE 273
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 124/274 (45%), Gaps = 28/274 (10%)
Query: 441 EHCIGKGGQGSVYKAELP---SGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRN 496
E IG G G V L EI VA+K + + +++FL+E + H N
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDK--QRRDFLSEASIMGQFDHPN 76
Query: 497 IVKFYGFCSHARHSFIVYEYLEMGSL-AMILSNDAAAKDLGWTKRMNVIKGVVDALSYMH 555
I+ G + + I+ EY+E GSL A + ND + + + +++G+ + Y+
Sbjct: 77 IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI---QLVGMLRGIGSGMKYLS 133
Query: 556 NDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG---TYGYVAPEL 612
+ + VHRD++++N+L++ VSDFG ++ L+ D G + APE
Sbjct: 134 DMSY---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 190
Query: 613 AYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSH 671
K T DV+S+G++ EV+ G+ P ++ A+ E RLP P
Sbjct: 191 IAYRKFTSASDVWSYGIVMWEVMSYGERP-----YWDMSNQDVIKAIEEGY--RLPPP-- 241
Query: 672 NVQDKLISIMEVAISCLDESPESRPTIQKVSQLL 705
D I++ ++ + C + RP ++ +L
Sbjct: 242 --MDCPIALHQLMLDCWQKERSDRPKFGQIVNML 273
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 113/278 (40%), Gaps = 40/278 (14%)
Query: 444 IGKGGQGSVYKAEL--PSGEIV--AVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVK 499
+G G G V + E PSG+ V AVK + S+ + +F+ EV + + HRN+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 500 FYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCF 559
YG +V E +GSL L LG R V V + + Y+ + F
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF 142
Query: 560 PPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWA---ELAGTYGYVAPELAYTM 616
+HRD++++N+LL + + DFG + L + ++ + + APE T
Sbjct: 143 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 199
Query: 617 KVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALN--------EMLDPRLP 667
+ D + FGV E+ G+ P I LN + RLP
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQEP--------------WIGLNGSQILHKIDKEGERLP 245
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLL 705
P QD I V + C PE RPT + L
Sbjct: 246 RPEDCPQD----IYNVMVQCWAHKPEDRPTFVALRDFL 279
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 22/265 (8%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G G G V+ VAVK L S FL E + ++H+ +V+ Y
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKS----LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 82
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+ +I+ EY+E GSL L + K L K +++ + + ++++ + +
Sbjct: 83 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 137
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG-TYGYVAPELAYTMKVTEKC 622
HRD+ + N+L+ ++DFG A+ ++ + E A + APE T K
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 623 DVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISIM 681
DV+SFG+L E++ G+ P N E+ N R+ P N ++L +M
Sbjct: 198 DVWSFGILLTEIVTHGRIP-------YPGMTNPEVIQNLERGYRMVRPD-NCPEELYQLM 249
Query: 682 EVAISCLDESPESRPTIQKVSQLLK 706
+ C E PE RPT + +L+
Sbjct: 250 RL---CWKERPEDRPTFDYLRSVLE 271
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 22/265 (8%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G G G V+ VAVK L S FL E + ++H+ +V+ Y
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKS----LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+ +I+ EY+E GSL L + K L K +++ + + ++++ + +
Sbjct: 77 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 131
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG-TYGYVAPELAYTMKVTEKC 622
HRD+ + N+L+ ++DFG A+ ++ + E A + APE T K
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 623 DVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISIM 681
DV+SFG+L E++ G+ P N E+ N R+ P N ++L +M
Sbjct: 192 DVWSFGILLTEIVTHGRIP-------YPGMTNPEVIQNLERGYRMVRPD-NCPEELYQLM 243
Query: 682 EVAISCLDESPESRPTIQKVSQLLK 706
+ C E PE RPT + +L+
Sbjct: 244 RL---CWKERPEDRPTFDYLRSVLE 265
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 123/275 (44%), Gaps = 28/275 (10%)
Query: 441 EHCIGKGGQGSVYKA--ELPSGE--IVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRN 496
E IG G G V +LP VA+K S + +++FL+E + H N
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEK--QRRDFLSEASIMGQFDHPN 69
Query: 497 IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHN 556
++ G + + I+ E++E GSL L + + + + +++G+ + Y+ +
Sbjct: 70 VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV--IQLVGMLRGIAAGMKYLAD 127
Query: 557 DCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG-----YVAPE 611
+ VHR ++++N+L++ VSDFG ++FL+ D+S+ + G + APE
Sbjct: 128 MNY---VHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 184
Query: 612 LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPS 670
K T DV+S+G++ EV+ G+ P N ++ D RLP P
Sbjct: 185 AIQYRKFTSASDVWSYGIVMWEVMSYGERP-------YWDMTNQDVINAIEQDYRLPPP- 236
Query: 671 HNVQDKLISIMEVAISCLDESPESRPTIQKVSQLL 705
D ++ ++ + C + RP ++ L
Sbjct: 237 ---MDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL 268
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 115/261 (44%), Gaps = 25/261 (9%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IGKG G V+K + + ++VA+K L ++ E+ L+ + K+YG
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 503 FCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPI 562
+I+ EYL GS +L L T+ +++ ++ L Y+H++
Sbjct: 93 SYLKDTKLWIIMEYLGGGSALDLLEPGP----LDETQIATILREILKGLDYLHSE---KK 145
Query: 563 VHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKC 622
+HRDI + NVLL E ++DFG A L GT ++APE+ K
Sbjct: 146 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKA 205
Query: 623 DVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPR--LPTPSHNVQDKLISI 680
D++S G+ A+E+ +G+ P L L P+ PT N L
Sbjct: 206 DIWSLGITAIELARGEPPH----------SELHPMKVLFLIPKNNPPTLEGNYSKPLKEF 255
Query: 681 MEVAISCLDESPESRPTIQKV 701
+E +CL++ P RPT +++
Sbjct: 256 VE---ACLNKEPSFRPTAKEL 273
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 113/278 (40%), Gaps = 40/278 (14%)
Query: 444 IGKGGQGSVYKAEL--PSGEIV--AVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVK 499
+G G G V + E PSG+ V AVK + S+ + +F+ EV + + HRN+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 500 FYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCF 559
YG +V E +GSL L LG R V V + + Y+ + F
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF 136
Query: 560 PPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWA---ELAGTYGYVAPELAYTM 616
+HRD++++N+LL + + DFG + L + ++ + + APE T
Sbjct: 137 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 617 KVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALN--------EMLDPRLP 667
+ D + FGV E+ G+ P I LN + RLP
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEP--------------WIGLNGSQILHKIDKEGERLP 239
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLL 705
P QD I V + C PE RPT + L
Sbjct: 240 RPEDCPQD----IYNVMVQCWAHKPEDRPTFVALRDFL 273
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 22/265 (8%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G G G V+ VAVK L S FL E + ++H+ +V+ Y
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKS----LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 86
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+ +I+ EY+E GSL L + K L K +++ + + ++++ + +
Sbjct: 87 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 141
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG-TYGYVAPELAYTMKVTEKC 622
HRD+ + N+L+ ++DFG A+ ++ + E A + APE T K
Sbjct: 142 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 201
Query: 623 DVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISIM 681
DV+SFG+L E++ G+ P N E+ N R+ P N ++L +M
Sbjct: 202 DVWSFGILLTEIVTHGRIP-------YPGMTNPEVIQNLERGYRMVRPD-NCPEELYQLM 253
Query: 682 EVAISCLDESPESRPTIQKVSQLLK 706
+ C E PE RPT + +L+
Sbjct: 254 RL---CWKERPEDRPTFDYLRSVLE 275
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 125/274 (45%), Gaps = 34/274 (12%)
Query: 436 NDFDDEHCIGKGGQGSVYK-AELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+DF+ +G G G V+K + PSG ++A K H L + A + + + E++ L
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRNQIIRELQVLHECNS 66
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
IV FYG I E+++ GSL +L + K V V+ L+Y+
Sbjct: 67 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---VSIAVIKGLTYL 123
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
I+HRD+ N+L++ E + DFG + L + +N E GT Y++PE
Sbjct: 124 REK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMAN--EFVGTRSYMSPERLQ 179
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLD-------PRLP 667
+ + D++S G+ +E+ G++PR +A+ E+LD P+LP
Sbjct: 180 GTHYSVQSDIWSMGLSLVEMAVGRYPRP------------PMAIFELLDYIVNEPPPKLP 227
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKV 701
+ +++ + CL ++P R ++++
Sbjct: 228 SAVFSLE-----FQDFVNKCLIKNPAERADLKQL 256
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 22/265 (8%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G G G V+ VAVK L S FL E + ++H+ +V+ Y
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKS----LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 82
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+ +I+ EY+E GSL L + K L K +++ + + ++++ + +
Sbjct: 83 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 137
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG-TYGYVAPELAYTMKVTEKC 622
HRD+ + N+L+ ++DFG A+ ++ + E A + APE T K
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 623 DVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISIM 681
DV+SFG+L E++ G+ P N E+ N R+ P N ++L +M
Sbjct: 198 DVWSFGILLTEIVTHGRIP-------YPGMTNPEVIQNLERGYRMVRPD-NCPEELYQLM 249
Query: 682 EVAISCLDESPESRPTIQKVSQLLK 706
+ C E PE RPT + +L+
Sbjct: 250 RL---CWKERPEDRPTFDYLRSVLE 271
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 22/265 (8%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G G G V+ VAVK L S FL E + ++H+ +V+ Y
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKS----LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 81
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+ +I+ EY+E GSL L + K L K +++ + + ++++ + +
Sbjct: 82 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 136
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG-TYGYVAPELAYTMKVTEKC 622
HRD+ + N+L+ ++DFG A+ ++ + E A + APE T K
Sbjct: 137 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 196
Query: 623 DVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISIM 681
DV+SFG+L E++ G+ P N E+ N R+ P N ++L +M
Sbjct: 197 DVWSFGILLTEIVTHGRIP-------YPGMTNPEVIQNLERGYRMVRPD-NCPEELYQLM 248
Query: 682 EVAISCLDESPESRPTIQKVSQLLK 706
+ C E PE RPT + +L+
Sbjct: 249 RL---CWKERPEDRPTFDYLRSVLE 270
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 133/289 (46%), Gaps = 50/289 (17%)
Query: 444 IGKGGQGSVYKAEL----PSGE--IVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNI 497
+G+G G V+ AE P + +VAVK + ++++F E + LT ++H +I
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKD---ASDNARKDFHREAELLTNLQHEHI 77
Query: 498 VKFYGFCSHARHSFIVYEYLEMGSL----------AMILSNDAAAKDLGWTKRMNVIKGV 547
VKFYG C +V+EY++ G L A++++ +L ++ +++ + +
Sbjct: 78 VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137
Query: 548 VDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG---- 603
+ Y+ + F VHRD++++N L+ + DFG ++ + S+++ + G
Sbjct: 138 AAGMVYLASQHF---VHRDLATRNCLVGENLLVKIGDFGMSRDVY--STDYYRVGGHTML 192
Query: 604 TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEML 662
++ PE K T + DV+S GV+ E+ GK P +++ NE++
Sbjct: 193 PIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPW------------YQLSNNEVI 240
Query: 663 D-----PRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
+ L P Q+ + E+ + C P R I+ + LL+
Sbjct: 241 ECITQGRVLQRPRTCPQE----VYELMLGCWQREPHMRKNIKGIHTLLQ 285
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 115/261 (44%), Gaps = 25/261 (9%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IGKG G V+K + + ++VA+K L ++ E+ L+ + K+YG
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 503 FCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPI 562
+I+ EYL GS +L L T+ +++ ++ L Y+H++
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLLEPGP----LDETQIATILREILKGLDYLHSE---KK 140
Query: 563 VHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKC 622
+HRDI + NVLL E ++DFG A L GT ++APE+ K
Sbjct: 141 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKA 200
Query: 623 DVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPR--LPTPSHNVQDKLISI 680
D++S G+ A+E+ +G+ P L L P+ PT N L
Sbjct: 201 DIWSLGITAIELARGEPPH----------SELHPMKVLFLIPKNNPPTLEGNYSKPLKEF 250
Query: 681 MEVAISCLDESPESRPTIQKV 701
+E +CL++ P RPT +++
Sbjct: 251 VE---ACLNKEPSFRPTAKEL 268
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 115/261 (44%), Gaps = 25/261 (9%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IGKG G V+K + + ++VA+K L ++ E+ L+ + K+YG
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 503 FCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPI 562
+I+ EYL GS +L L T+ +++ ++ L Y+H++
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEPGP----LDETQIATILREILKGLDYLHSE---KK 125
Query: 563 VHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKC 622
+HRDI + NVLL E ++DFG A L GT ++APE+ K
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKA 185
Query: 623 DVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPR--LPTPSHNVQDKLISI 680
D++S G+ A+E+ +G+ P L L P+ PT N L
Sbjct: 186 DIWSLGITAIELARGEPPHS----------ELHPMKVLFLIPKNNPPTLEGNYSKPLKEF 235
Query: 681 MEVAISCLDESPESRPTIQKV 701
+E +CL++ P RPT +++
Sbjct: 236 VE---ACLNKEPSFRPTAKEL 253
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 115/261 (44%), Gaps = 25/261 (9%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IGKG G V+K + + ++VA+K L ++ E+ L+ + K+YG
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 503 FCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPI 562
+I+ EYL GS +L L T+ +++ ++ L Y+H++
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEPGP----LDETQIATILREILKGLDYLHSE---KK 125
Query: 563 VHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKC 622
+HRDI + NVLL E ++DFG A L GT ++APE+ K
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKA 185
Query: 623 DVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPR--LPTPSHNVQDKLISI 680
D++S G+ A+E+ +G+ P L L P+ PT N L
Sbjct: 186 DIWSLGITAIELARGEPPHS----------ELHPMKVLFLIPKNNPPTLEGNYSKPLKEF 235
Query: 681 MEVAISCLDESPESRPTIQKV 701
+E +CL++ P RPT +++
Sbjct: 236 VE---ACLNKEPSFRPTAKEL 253
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 9/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+DF+ +GKG G+VY A E S IVA+K + + + E++ + H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NI++ Y + R +++ EY G L L + + +++ + DAL Y
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDE---QRTATIMEELADALMYC 139
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H ++HRDI +N+LL L+ E ++DFG + + S + GT Y+ PE+
Sbjct: 140 HGK---KVIHRDIKPENLLLGLKGELKIADFGWS--VHAPSLRRKTMCGTLDYLPPEMIE 194
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
EK D++ GVL E++ G P
Sbjct: 195 GRMHNEKVDLWCIGVLCYELLVGNPP 220
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 115/259 (44%), Gaps = 21/259 (8%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IGKG G VYK + + E+VA+K L ++ E+ L+ I +++G
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSPYITRYFG 84
Query: 503 FCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPI 562
+ +I+ EYL GS +L L T +++ ++ L Y+H++
Sbjct: 85 SYLKSTKLWIIMEYLGGGSALDLLKPGP----LEETYIATILREILKGLDYLHSER---K 137
Query: 563 VHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKC 622
+HRDI + NVLL + + ++DFG A L GT ++APE+ K
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKA 197
Query: 623 DVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISIME 682
D++S G+ A+E+ KG+ P +L L P+ P+ Q E
Sbjct: 198 DIWSLGITAIELAKGEPPN----------SDLHPMRVLFLIPKNSPPTLEGQHSK-PFKE 246
Query: 683 VAISCLDESPESRPTIQKV 701
+CL++ P RPT +++
Sbjct: 247 FVEACLNKDPRFRPTAKEL 265
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 132/294 (44%), Gaps = 31/294 (10%)
Query: 427 VYEEIIRVTNDFDDE---------HCIGKGGQGSVY--KAELPSGEIVAVKKFHSPLPSE 475
YE+ + ++F E +G G G V + +LPS + ++V +
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 476 MASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDL 535
+++FL E + H NI++ G + ++ IV E +E GSL L A +
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV 146
Query: 536 GWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDS 595
+ + +++G+ + Y+ + + VHRD++++N+L++ VSDFG ++ L+ D
Sbjct: 147 --IQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 596 SNWAELAG---TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXX 651
G + +PE K T DV+S+G++ EV+ G+ P
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-----YWEMSN 256
Query: 652 XNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLL 705
++ A++E RLP P D ++ ++ + C + +RP +++ +L
Sbjct: 257 QDVIKAVDEGY--RLPPP----MDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 123/274 (44%), Gaps = 28/274 (10%)
Query: 441 EHCIGKGGQGSVYKAELP---SGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRN 496
E IG G G V L EI VA+K + + +++FL+E + H N
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDK--QRRDFLSEASIMGQFDHPN 91
Query: 497 IVKFYGFCSHARHSFIVYEYLEMGSL-AMILSNDAAAKDLGWTKRMNVIKGVVDALSYMH 555
I+ G + + I+ EY+E GSL A + ND + + + +++G+ + Y+
Sbjct: 92 IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI---QLVGMLRGIGSGMKYLS 148
Query: 556 NDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG---TYGYVAPEL 612
+ VHRD++++N+L++ VSDFG ++ L+ D G + APE
Sbjct: 149 D---MSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 205
Query: 613 AYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSH 671
K T DV+S+G++ EV+ G+ P ++ A+ E RLP P
Sbjct: 206 IAYRKFTSASDVWSYGIVMWEVMSYGERP-----YWDMSNQDVIKAIEEGY--RLPPP-- 256
Query: 672 NVQDKLISIMEVAISCLDESPESRPTIQKVSQLL 705
D I++ ++ + C + RP ++ +L
Sbjct: 257 --MDCPIALHQLMLDCWQKERSDRPKFGQIVNML 288
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 117/265 (44%), Gaps = 22/265 (8%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G G G V+ VAVK L S FL E + ++H+ +V+ Y
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKS----LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 72
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+ +I+ EY+E GSL L + K L K +++ + + ++++ + +
Sbjct: 73 VTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---I 127
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG-TYGYVAPELAYTMKVTEKC 622
HR++ + N+L+ ++DFG A+ ++ + E A + APE T K
Sbjct: 128 HRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 187
Query: 623 DVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISIM 681
DV+SFG+L E++ G+ P N E+ N R+ P N ++L +M
Sbjct: 188 DVWSFGILLTEIVTHGRIP-------YPGMTNPEVIQNLERGYRMVRPD-NCPEELYQLM 239
Query: 682 EVAISCLDESPESRPTIQKVSQLLK 706
+ C E PE RPT + +L+
Sbjct: 240 RL---CWKERPEDRPTFDYLRSVLE 261
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 125/271 (46%), Gaps = 22/271 (8%)
Query: 441 EHCIGKGGQGSVY--KAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIV 498
+ +G G G V + +LPS + ++V + +++FL E + H NI+
Sbjct: 21 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 499 KFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDC 558
+ G + ++ IV E +E GSL L A + + + +++G+ + Y+ +
Sbjct: 81 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYLSDMG 138
Query: 559 FPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG---TYGYVAPELAYT 615
+ VHRD++++N+L++ VSDFG ++ L+ D G + +PE
Sbjct: 139 Y---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 195
Query: 616 MKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQ 674
K T DV+S+G++ EV+ G+ P ++ A++E RLP P
Sbjct: 196 RKFTSASDVWSYGIVLWEVMSYGERP-----YWEMSNQDVIKAVDEGY--RLPPP----M 244
Query: 675 DKLISIMEVAISCLDESPESRPTIQKVSQLL 705
D ++ ++ + C + +RP +++ +L
Sbjct: 245 DCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 112/278 (40%), Gaps = 40/278 (14%)
Query: 444 IGKGGQGSVYKAEL--PSGEIV--AVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVK 499
+G G G V + E PSG+ V AVK + S+ + +F+ EV + + HRN+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 500 FYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCF 559
YG +V E +GSL L LG R V V + + Y+ + F
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF 142
Query: 560 PPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWA---ELAGTYGYVAPELAYTM 616
+HRD++++N+LL + + DFG + L + + + + APE T
Sbjct: 143 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 199
Query: 617 KVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALN--------EMLDPRLP 667
+ D + FGV E+ G+ P I LN + RLP
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQEP--------------WIGLNGSQILHKIDKEGERLP 245
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLL 705
P QD I V + C PE RPT + L
Sbjct: 246 RPEDCPQD----IYNVMVQCWAHKPEDRPTFVALRDFL 279
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 112/278 (40%), Gaps = 40/278 (14%)
Query: 444 IGKGGQGSVYKAEL--PSGEIV--AVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVK 499
+G G G V + E PSG+ V AVK + S+ + +F+ EV + + HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 500 FYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCF 559
YG +V E +GSL L LG R V V + + Y+ + F
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF 132
Query: 560 PPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWA---ELAGTYGYVAPELAYTM 616
+HRD++++N+LL + + DFG + L + + + + APE T
Sbjct: 133 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 189
Query: 617 KVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALN--------EMLDPRLP 667
+ D + FGV E+ G+ P I LN + RLP
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEP--------------WIGLNGSQILHKIDKEGERLP 235
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLL 705
P QD I V + C PE RPT + L
Sbjct: 236 RPEDCPQD----IYNVMVQCWAHKPEDRPTFVALRDFL 269
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 100/219 (45%), Gaps = 33/219 (15%)
Query: 430 EIIRV--TNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVK 487
+I+R T F H I G Y ++ EIV K Q E N+ +
Sbjct: 9 QILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLK-----------QVEHTNDER 57
Query: 488 -TLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSN-----DAAAKDLGWTKRM 541
L+ + H I++ +G A+ F++ +Y+E G L +L + AK
Sbjct: 58 LMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYA----- 112
Query: 542 NVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAEL 601
V AL Y+H+ I++RD+ +N+LLD ++DFG AK++ PD + L
Sbjct: 113 ---AEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYV-PDVT--YXL 163
Query: 602 AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
GT Y+APE+ T + D +SFG+L E++ G P
Sbjct: 164 CGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 32/279 (11%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
D +H +G G G VY+ + VAVK L + +EFL E + I+H
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT----LKEDTMEVEEFLKEAAVMKEIKH 68
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
N+V+ G C+ +I+ E++ G+L L + +++ + + + A+ Y+
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 127
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPE- 611
F +HRD++++N L+ + V+DFG ++ + D+ A + + APE
Sbjct: 128 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTAPES 183
Query: 612 LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIA-LNEML--DPRLP 667
LAY K + K DV++FGVL E+ G P ++++ + E+L D R+
Sbjct: 184 LAYN-KFSIKSDVWAFGVLLWEIATYGMSP----------YPGIDLSQVYELLEKDYRME 232
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P +K+ +M +C +P RP+ ++ Q +
Sbjct: 233 RPE-GCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFE 267
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 32/279 (11%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
D +H +G G G VY+ + VAVK L + +EFL E + I+H
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT----LKEDTMEVEEFLKEAAVMKEIKH 73
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
N+V+ G C+ +I+ E++ G+L L + +++ + + + A+ Y+
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPE- 611
F +HRD++++N L+ + V+DFG ++ + D+ A + + APE
Sbjct: 133 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXT-AHAGAKFPIKWTAPES 188
Query: 612 LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIA-LNEML--DPRLP 667
LAY K + K DV++FGVL E+ G P ++++ + E+L D R+
Sbjct: 189 LAYN-KFSIKSDVWAFGVLLWEIATYGMSP----------YPGIDLSQVYELLEKDYRME 237
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P +K+ +M +C +P RP+ ++ Q +
Sbjct: 238 RP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFE 272
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 32/279 (11%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
D +H +G G G VY+ + VAVK L + +EFL E + I+H
Sbjct: 14 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT----LKEDTMEVEEFLKEAAVMKEIKH 69
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
N+V+ G C+ +I+ E++ G+L L + +++ + + + A+ Y+
Sbjct: 70 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 128
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPE- 611
F +HRD++++N L+ + V+DFG ++ + D+ A + + APE
Sbjct: 129 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXT-AHAGAKFPIKWTAPES 184
Query: 612 LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIA-LNEML--DPRLP 667
LAY K + K DV++FGVL E+ G P ++++ + E+L D R+
Sbjct: 185 LAYN-KFSIKSDVWAFGVLLWEIATYGMSP----------YPGIDLSQVYELLEKDYRME 233
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P +K+ +M +C +P RP+ ++ Q +
Sbjct: 234 RP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFE 268
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 106/210 (50%), Gaps = 31/210 (14%)
Query: 445 GKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFC 504
+G G V+KA+L + E VAVK F P+ + + Q E+ EV +L G++H NI++F G
Sbjct: 33 ARGRFGCVWKAQLLN-EYVAVKIF--PIQDKQSWQNEY--EVYSLPGMKHENILQFIG-- 85
Query: 505 SHARHS------FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDC 558
+ R + +++ + E GSL+ L A + W + ++ + + L+Y+H D
Sbjct: 86 AEKRGTSVDVDLWLITAFHEKGSLSDFLK----ANVVSWNELCHIAETMARGLAYLHEDI 141
Query: 559 -------FPPIVHRDISSKNVLLDLENEAHVSDFGTA-KFLKPDSSNWAE-LAGTYGYVA 609
P I HRDI SKNVLL A ++DFG A KF S+ GT Y+A
Sbjct: 142 PGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMA 201
Query: 610 PE-----LAYTMKVTEKCDVYSFGVLALEV 634
PE + + + D+Y+ G++ E+
Sbjct: 202 PEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 32/279 (11%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
D +H +G G G VY+ + VAVK L + +EFL E + I+H
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT----LKEDTMEVEEFLKEAAVMKEIKH 68
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
N+V+ G C+ +I+ E++ G+L L + +++ + + + A+ Y+
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPE- 611
F +HRD++++N L+ + V+DFG ++ + D+ A + + APE
Sbjct: 128 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTAPES 183
Query: 612 LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIA-LNEML--DPRLP 667
LAY K + K DV++FGVL E+ G P ++++ + E+L D R+
Sbjct: 184 LAYN-KFSIKSDVWAFGVLLWEIATYGMSP----------YPGIDLSQVYELLEKDYRME 232
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P +K+ +M +C +P RP+ ++ Q +
Sbjct: 233 RP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFE 267
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 32/279 (11%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
D +H +G G G VY+ + VAVK L + +EFL E + I+H
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT----LKEDTMEVEEFLKEAAVMKEIKH 68
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
N+V+ G C+ +I+ E++ G+L L + +++ + + + A+ Y+
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 127
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPE- 611
F +HRD++++N L+ + V+DFG ++ + D+ A + + APE
Sbjct: 128 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTAPES 183
Query: 612 LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIA-LNEML--DPRLP 667
LAY K + K DV++FGVL E+ G P ++++ + E+L D R+
Sbjct: 184 LAYN-KFSIKSDVWAFGVLLWEIATYGMSP----------YPGIDLSQVYELLEKDYRME 232
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P +K+ +M +C +P RP+ ++ Q +
Sbjct: 233 RP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFE 267
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 32/279 (11%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
D +H +G G G VY+ + VAVK L + +EFL E + I+H
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT----LKEDTMEVEEFLKEAAVMKEIKH 68
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
N+V+ G C+ +I+ E++ G+L L + +++ + + + A+ Y+
Sbjct: 69 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPE- 611
F +HRD++++N L+ + V+DFG ++ + D+ A + + APE
Sbjct: 128 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTAPES 183
Query: 612 LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIA-LNEML--DPRLP 667
LAY K + K DV++FGVL E+ G P ++++ + E+L D R+
Sbjct: 184 LAYN-KFSIKSDVWAFGVLLWEIATYGMSP----------YPGIDLSQVYELLEKDYRME 232
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P +K+ +M +C +P RP+ ++ Q +
Sbjct: 233 RP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFE 267
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 139/271 (51%), Gaps = 30/271 (11%)
Query: 444 IGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G G VYKA+ +G + A K + E+ ++++ E++ L H IVK G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL---EDYIVEIEILATCDHPYIVKLLG 75
Query: 503 FCSHARHSFIVYEYLEMGSL-AMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPP 561
H +I+ E+ G++ A++L D + L + V + +++AL+++H+
Sbjct: 76 AYYHDGKLWIMIEFCPGGAVDAIMLELD---RGLTEPQIQVVCRQMLEALNFLHSK---R 129
Query: 562 IVHRDISSKNVLLDLENEAHVSDFG-TAKFLKPDSSNWAELAGTYGYVAPELAY--TMKV 618
I+HRD+ + NVL+ LE + ++DFG +AK LK GT ++APE+ TMK
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR-DSFIGTPYWMAPEVVMCETMKD 188
Query: 619 TE---KCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQD 675
T K D++S G+ +E+ + + P L+IA ++ P L TPS
Sbjct: 189 TPYDYKADIWSLGITLIEMAQIEPPH---HELNPMRVLLKIAKSD--PPTLLTPS-KWSV 242
Query: 676 KLISIMEVAISCLDESPESRPTIQKVSQLLK 706
+ +++A LD++PE+RP+ +QLL+
Sbjct: 243 EFRDFLKIA---LDKNPETRPS---AAQLLE 267
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 32/279 (11%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
D +H +G G G VY+ + VAVK L + +EFL E + I+H
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT----LKEDTMEVEEFLKEAAVMKEIKH 73
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
N+V+ G C+ +I+ E++ G+L L + +++ + + + A+ Y+
Sbjct: 74 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPE- 611
F +HRD++++N L+ + V+DFG ++ + D+ A + + APE
Sbjct: 133 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTAPES 188
Query: 612 LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIA-LNEML--DPRLP 667
LAY K + K DV++FGVL E+ G P ++++ + E+L D R+
Sbjct: 189 LAYN-KFSIKSDVWAFGVLLWEIATYGMSP----------YPGIDLSQVYELLEKDYRME 237
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P +K+ +M +C +P RP+ ++ Q +
Sbjct: 238 RP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFE 272
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 32/279 (11%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
D +H +G G G VY+ + VAVK L + +EFL E + I+H
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT----LKEDTMEVEEFLKEAAVMKEIKH 68
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
N+V+ G C+ +I+ E++ G+L L + +++ + + + A+ Y+
Sbjct: 69 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPE- 611
F +HRD++++N L+ + V+DFG ++ + D+ A + + APE
Sbjct: 128 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTAPES 183
Query: 612 LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIA-LNEML--DPRLP 667
LAY K + K DV++FGVL E+ G P ++++ + E+L D R+
Sbjct: 184 LAYN-KFSIKSDVWAFGVLLWEIATYGMSP----------YPGIDLSQVYELLEKDYRME 232
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P +K+ +M +C +P RP+ ++ Q +
Sbjct: 233 RP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFE 267
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 32/279 (11%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
D +H +G G G VY+ + VAVK L + +EFL E + I+H
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT----LKEDTMEVEEFLKEAAVMKEIKH 68
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
N+V+ G C+ +I+ E++ G+L L + +++ + + + A+ Y+
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPE- 611
F +HRD++++N L+ + V+DFG ++ + D+ A + + APE
Sbjct: 128 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTAPES 183
Query: 612 LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIA-LNEML--DPRLP 667
LAY K + K DV++FGVL E+ G P ++++ + E+L D R+
Sbjct: 184 LAYN-KFSIKSDVWAFGVLLWEIATYGMSP----------YPGIDLSQVYELLEKDYRME 232
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P +K+ +M +C +P RP+ ++ Q +
Sbjct: 233 RP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFE 267
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 32/279 (11%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
D +H +G G G VY+ + VAVK L + +EFL E + I+H
Sbjct: 17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT----LKEDTMEVEEFLKEAAVMKEIKH 72
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
N+V+ G C+ +I+ E++ G+L L + +++ + + + A+ Y+
Sbjct: 73 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 131
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPE- 611
F +HRD++++N L+ + V+DFG ++ + D+ A + + APE
Sbjct: 132 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTAPES 187
Query: 612 LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIA-LNEML--DPRLP 667
LAY K + K DV++FGVL E+ G P ++++ + E+L D R+
Sbjct: 188 LAYN-KFSIKSDVWAFGVLLWEIATYGMSP----------YPGIDLSQVYELLEKDYRME 236
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P +K+ +M +C +P RP+ ++ Q +
Sbjct: 237 RP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFE 271
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 125/278 (44%), Gaps = 30/278 (10%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
D +H +G G G VY+ + VAVK L + +EFL E + I+H
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT----LKEDTMEVEEFLKEAAVMKEIKH 66
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
N+V+ G C+ +I+ E++ G+L L + +++ + + + A+ Y+
Sbjct: 67 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPE- 611
F +HRD++++N L+ + V+DFG ++ + D+ A + + APE
Sbjct: 126 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXT-AHAGAKFPIKWTAPES 181
Query: 612 LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEML--DPRLPT 668
LAY K + K DV++FGVL E+ G P + E+L D R+
Sbjct: 182 LAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ---------VYELLEKDYRMER 231
Query: 669 PSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P +K+ +M +C +P RP+ ++ Q +
Sbjct: 232 P-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFE 265
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 32/279 (11%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
D +H +G G G VY+ + VAVK L + +EFL E + I+H
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT----LKEDTMEVEEFLKEAAVMKEIKH 70
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
N+V+ G C+ +I+ E++ G+L L + +++ + + + A+ Y+
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPE- 611
F +HRD++++N L+ + V+DFG ++ + D+ A + + APE
Sbjct: 130 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTAPES 185
Query: 612 LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIA-LNEML--DPRLP 667
LAY K + K DV++FGVL E+ G P ++++ + E+L D R+
Sbjct: 186 LAYN-KFSIKSDVWAFGVLLWEIATYGMSP----------YPGIDLSQVYELLEKDYRME 234
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P +K+ +M +C +P RP+ ++ Q +
Sbjct: 235 RPE-GCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFE 269
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 32/279 (11%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
D +H +G G G VY+ + VAVK L + +EFL E + I+H
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT----LKEDTMEVEEFLKEAAVMKEIKH 73
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
N+V+ G C+ +I+ E++ G+L L + +++ + + + A+ Y+
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPE- 611
F +HRD++++N L+ + V+DFG ++ + D+ A + + APE
Sbjct: 133 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTAPES 188
Query: 612 LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIA-LNEML--DPRLP 667
LAY K + K DV++FGVL E+ G P ++++ + E+L D R+
Sbjct: 189 LAYN-KFSIKSDVWAFGVLLWEIATYGMSP----------YPGIDLSQVYELLEKDYRME 237
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P +K+ +M +C +P RP+ ++ Q +
Sbjct: 238 RP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFE 272
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 124/271 (45%), Gaps = 22/271 (8%)
Query: 441 EHCIGKGGQGSVY--KAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIV 498
+ +G G G V + +LPS + ++V + +++FL E + H NI+
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 499 KFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDC 558
+ G + ++ IV E +E GSL L A + + + +++G+ + Y+ +
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYLSD-- 165
Query: 559 FPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG---TYGYVAPELAYT 615
VHRD++++N+L++ VSDFG ++ L+ D G + +PE
Sbjct: 166 -MGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 616 MKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQ 674
K T DV+S+G++ EV+ G+ P ++ A++E RLP P
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERP-----YWEMSNQDVIKAVDEGY--RLPPP----M 273
Query: 675 DKLISIMEVAISCLDESPESRPTIQKVSQLL 705
D ++ ++ + C + +RP +++ +L
Sbjct: 274 DCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 103/235 (43%), Gaps = 42/235 (17%)
Query: 432 IRVTNDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLT 490
+R +DF++ +G+G G V KA A+KK E S L+EV L
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT--EEKLST--ILSEVMLLA 57
Query: 491 GIRHRNIVKFYGFCSHARHS-------------FIVYEYLEMGSLAMIL--SNDAAAKDL 535
+ H+ +V++Y R+ FI EY E G+L ++ N +D
Sbjct: 58 SLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDE 117
Query: 536 GWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAK------ 589
W + + +++ALSY+H+ I+HRD+ N+ +D + DFG AK
Sbjct: 118 YW----RLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 590 -FLKPDSS-------NWAELAGTYGYVAPE-LAYTMKVTEKCDVYSFGVLALEVI 635
LK DS N GT YVA E L T EK D+YS G++ E+I
Sbjct: 171 DILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 32/279 (11%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
D +H +G G G VY+ + VAVK L + +EFL E + I+H
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT----LKEDTMEVEEFLKEAAVMKEIKH 73
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
N+V+ G C+ +I+ E++ G+L L + +++ + + + A+ Y+
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPE- 611
F +HRD++++N L+ + V+DFG ++ + D+ A + + APE
Sbjct: 133 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTAPES 188
Query: 612 LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIA-LNEML--DPRLP 667
LAY K + K DV++FGVL E+ G P ++++ + E+L D R+
Sbjct: 189 LAYN-KFSIKSDVWAFGVLLWEIATYGMSP----------YPGIDLSQVYELLEKDYRME 237
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P +K+ +M +C +P RP+ ++ Q +
Sbjct: 238 RP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFE 272
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G GG V+ A +L VAVK + L + + F E + + H IV Y
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 503 FCSHARHS----FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDC 558
+ +IV EY++ +L I+ + + + + VI AL++ H +
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQNG 136
Query: 559 FPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN----WAELAGTYGYVAPELAY 614
I+HRD+ N+L+ N V DFG A+ + DS N A + GT Y++PE A
Sbjct: 137 ---IIHRDVKPANILISATNAVKVVDFGIARAIA-DSGNSVXQTAAVIGTAQYLSPEQAR 192
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
V + DVYS G + EV+ G+ P
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 32/279 (11%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
D +H +G G G VY+ + VAVK L + +EFL E + I+H
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT----LKEDTMEVEEFLKEAAVMKEIKH 73
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
N+V+ G C+ +I+ E++ G+L L + +++ + + + A+ Y+
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYL 132
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPE- 611
F +HRD++++N L+ + V+DFG ++ + D+ A + + APE
Sbjct: 133 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTAPES 188
Query: 612 LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIA-LNEML--DPRLP 667
LAY K + K DV++FGVL E+ G P ++++ + E+L D R+
Sbjct: 189 LAYN-KFSIKSDVWAFGVLLWEIATYGMSP----------YPGIDLSQVYELLEKDYRME 237
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P +K+ +M +C +P RP+ ++ Q +
Sbjct: 238 RP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFE 272
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 139/271 (51%), Gaps = 30/271 (11%)
Query: 444 IGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G G VYKA+ +G + A K + E+ ++++ E++ L H IVK G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL---EDYIVEIEILATCDHPYIVKLLG 83
Query: 503 FCSHARHSFIVYEYLEMGSL-AMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPP 561
H +I+ E+ G++ A++L D + L + V + +++AL+++H+
Sbjct: 84 AYYHDGKLWIMIEFCPGGAVDAIMLELD---RGLTEPQIQVVCRQMLEALNFLHSK---R 137
Query: 562 IVHRDISSKNVLLDLENEAHVSDFG-TAKFLKPDSSNWAELAGTYGYVAPELAY--TMKV 618
I+HRD+ + NVL+ LE + ++DFG +AK LK GT ++APE+ TMK
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR-DSFIGTPYWMAPEVVMCETMKD 196
Query: 619 TE---KCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQD 675
T K D++S G+ +E+ + + P L+IA ++ P L TPS
Sbjct: 197 TPYDYKADIWSLGITLIEMAQIEPPH---HELNPMRVLLKIAKSD--PPTLLTPS-KWSV 250
Query: 676 KLISIMEVAISCLDESPESRPTIQKVSQLLK 706
+ +++A LD++PE+RP+ +QLL+
Sbjct: 251 EFRDFLKIA---LDKNPETRPS---AAQLLE 275
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 32/279 (11%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
D +H +G G G VY+ + VAVK L + +EFL E + I+H
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT----LKEDTMEVEEFLKEAAVMKEIKH 70
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
N+V+ G C+ +I+ E++ G+L L + +++ + + + A+ Y+
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPE- 611
F +HRD++++N L+ + V+DFG ++ + D+ A + + APE
Sbjct: 130 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-APAGAKFPIKWTAPES 185
Query: 612 LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIA-LNEML--DPRLP 667
LAY K + K DV++FGVL E+ G P ++++ + E+L D R+
Sbjct: 186 LAYN-KFSIKSDVWAFGVLLWEIATYGMSP----------YPGIDLSQVYELLEKDYRME 234
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P +K+ +M +C +P RP+ ++ Q +
Sbjct: 235 RP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFE 269
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 32/279 (11%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
D +H +G G G VY+ + VAVK L + +EFL E + I+H
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT----LKEDTMEVEEFLKEAAVMKEIKH 70
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
N+V+ G C+ +I+ E++ G+L L + +++ + + + A+ Y+
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPE- 611
F +HRD++++N L+ + V+DFG ++ + D+ A + + APE
Sbjct: 130 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTAPES 185
Query: 612 LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIA-LNEML--DPRLP 667
LAY K + K DV++FGVL E+ G P ++++ + E+L D R+
Sbjct: 186 LAYN-KFSIKSDVWAFGVLLWEIATYGMSP----------YPGIDLSQVYELLEKDYRME 234
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P +K+ +M +C +P RP+ ++ Q +
Sbjct: 235 RP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFE 269
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 32/279 (11%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
D +H +G G G VY+ + VAVK L + +EFL E + I+H
Sbjct: 14 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT----LKEDTMEVEEFLKEAAVMKEIKH 69
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
N+V+ G C+ +I+ E++ G+L L + +++ + + + A+ Y+
Sbjct: 70 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 128
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPE- 611
F +HRD++++N L+ + V+DFG ++ + D+ A + + APE
Sbjct: 129 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-APAGAKFPIKWTAPES 184
Query: 612 LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIA-LNEML--DPRLP 667
LAY K + K DV++FGVL E+ G P ++++ + E+L D R+
Sbjct: 185 LAYN-KFSIKSDVWAFGVLLWEIATYGMSP----------YPGIDLSQVYELLEKDYRME 233
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P +K+ +M +C +P RP+ ++ Q +
Sbjct: 234 RP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFE 268
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 115/266 (43%), Gaps = 30/266 (11%)
Query: 441 EHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
E +G G G V+ A VAVK P M S + FL E + ++H +VK
Sbjct: 187 EKKLGAGQFGEVWMATYNKHTKVAVKTMK---PGSM-SVEAFLAEANVMKTLQHDKLVKL 242
Query: 501 YGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ + +I+ E++ GSL L +D +K K ++ + + ++++ +
Sbjct: 243 HAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQRNY- 299
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTE 620
+HRD+ + N+L+ ++DFG A+ W APE T
Sbjct: 300 --IHRDLRAANILVSASLVCKIADFGLARVGAKFPIKW---------TAPEAINFGSFTI 348
Query: 621 KCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLIS 679
K DV+SFG+L +E++ G+ P N E+ R+P P N ++L +
Sbjct: 349 KSDVWSFGILLMEIVTYGRIP-------YPGMSNPEVIRALERGYRMPRP-ENCPEELYN 400
Query: 680 IMEVAISCLDESPESRPTIQKVSQLL 705
IM + C PE RPT + + +L
Sbjct: 401 IM---MRCWKNRPEERPTFEYIQSVL 423
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 113/281 (40%), Gaps = 42/281 (14%)
Query: 444 IGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G+G G V K +G IVA+KKF +M + + E+K L +RH N+V
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIA-MREIKLLKQLRHENLVNLLE 91
Query: 503 FCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPI 562
C + ++V+E+++ L + + L + + +++ + + H+ I
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDL---ELFPNGLDYQVVQKYLFQIINGIGFCHSH---NI 145
Query: 563 VHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY-TMKVTEK 621
+HRDI +N+L+ + DFG A+ L + + T Y APEL +K +
Sbjct: 146 IHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKA 205
Query: 622 CDVYSFGVLALEVIKG-------------------------KHPRDFXXXXXXXXXNL-E 655
DV++ G L E+ G +H F L E
Sbjct: 206 VDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPE 265
Query: 656 IALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRP 696
I E L+ R P S V D +A CL P+ RP
Sbjct: 266 IKEREPLERRYPKLSEVVID-------LAKKCLHIDPDKRP 299
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 86/182 (47%), Gaps = 13/182 (7%)
Query: 466 KKFHSPLPSEMASQQEFLNEVKTLTGIR----HRNIVKFYGFCSHARHSFIVYEYLEMGS 521
KK + ++ S++ N K +T ++ H NIVK + H+F+V E L G
Sbjct: 33 KKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92
Query: 522 LAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLEN--- 578
L K T+ +++ +V A+S+MH+ +VHRD+ +N+L EN
Sbjct: 93 L---FERIKKKKHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNL 146
Query: 579 EAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGK 638
E + DFG A+ PD+ T Y APEL E CD++S GV+ ++ G+
Sbjct: 147 EIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQ 206
Query: 639 HP 640
P
Sbjct: 207 VP 208
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G GG V+ A +L VAVK + L + + F E + + H IV Y
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 503 FCSHARHS----FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDC 558
+ +IV EY++ +L I+ + + + + VI AL++ H +
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQNG 136
Query: 559 FPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN----WAELAGTYGYVAPELAY 614
I+HRD+ N+++ N V DFG A+ + DS N A + GT Y++PE A
Sbjct: 137 ---IIHRDVKPANIMISATNAVKVMDFGIARAIA-DSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
V + DVYS G + EV+ G+ P
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G GG V+ A +L VAVK + L + + F E + + H IV Y
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 503 FCSHARHS----FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDC 558
+ +IV EY++ +L I+ + + + + VI AL++ H +
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQNG 136
Query: 559 FPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN----WAELAGTYGYVAPELAY 614
I+HRD+ N+++ N V DFG A+ + DS N A + GT Y++PE A
Sbjct: 137 ---IIHRDVKPANIMISATNAVKVMDFGIARAIA-DSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
V + DVYS G + EV+ G+ P
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 125/278 (44%), Gaps = 30/278 (10%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
D +H +G G G VY+ + VAVK L + +EFL E + I+H
Sbjct: 11 TDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKT----LKEDTMEVEEFLKEAAVMKEIKH 66
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
N+V+ G C+ +I+ E++ G+L L + +++ + + + A+ Y+
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPE- 611
F +HRD++++N L+ + V+DFG ++ + D+ A + + APE
Sbjct: 126 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXT-AHAGAKFPIKWTAPES 181
Query: 612 LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEML--DPRLPT 668
LAY K + K DV++FGVL E+ G P + E+L D R+
Sbjct: 182 LAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ---------VYELLEKDYRMER 231
Query: 669 PSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P +K+ +M +C +P RP+ ++ Q +
Sbjct: 232 P-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFE 265
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 125/278 (44%), Gaps = 30/278 (10%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
D +H +G G G VY+ + VAVK L + +EFL E + I+H
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT----LKEDTMEVEEFLKEAAVMKEIKH 66
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
N+V+ G C+ +I+ E++ G+L L + +++ + + + A+ Y+
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPE- 611
F +HRD++++N L+ + V+DFG ++ + D+ A + + APE
Sbjct: 126 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFT-AHAGAKFPIKWTAPES 181
Query: 612 LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEML--DPRLPT 668
LAY K + K DV++FGVL E+ G P + E+L D R+
Sbjct: 182 LAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ---------VYELLEKDYRMER 231
Query: 669 PSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P +K+ +M +C +P RP+ ++ Q +
Sbjct: 232 P-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFE 265
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 35/186 (18%)
Query: 465 VKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAM 524
++KFH +E NE+ L + H NI+K + ++ ++V E+ E G L
Sbjct: 86 IEKFH----------EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFE 135
Query: 525 ILSN-------DAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLE 577
+ N DAA N++K ++ + Y+H IVHRDI +N+LL+ +
Sbjct: 136 QIINRHKFDECDAA----------NIMKQILSGICYLHK---HNIVHRDIKPENILLENK 182
Query: 578 N---EAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEV 634
N + DFG + F D L Y Y+APE+ K EKCDV+S GV+ +
Sbjct: 183 NSLLNIKIVDFGLSSFFSKDYKLRDRLGTAY-YIAPEVL-KKKYNEKCDVWSCGVIMYIL 240
Query: 635 IKGKHP 640
+ G P
Sbjct: 241 LCGYPP 246
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 132/287 (45%), Gaps = 32/287 (11%)
Query: 428 YEEIIRVTNDFDDEHCIGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEV 486
Y++ D +H +G G G VY+ + VAVK L + +EFL E
Sbjct: 209 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT----LKEDTMEVEEFLKEA 264
Query: 487 KTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKG 546
+ I+H N+V+ G C+ +I+ E++ G+L L + +++ + +
Sbjct: 265 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQ 323
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY- 605
+ A+ Y+ F +HR+++++N L+ + V+DFG ++ + D+ A +
Sbjct: 324 ISSAMEYLEKKNF---IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFP 379
Query: 606 -GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIA-LNEM 661
+ APE LAY K + K DV++FGVL E+ G P ++++ + E+
Sbjct: 380 IKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----------YPGIDLSQVYEL 428
Query: 662 L--DPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
L D R+ P +K+ +M +C +P RP+ ++ Q +
Sbjct: 429 LEKDYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFE 471
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 133/288 (46%), Gaps = 34/288 (11%)
Query: 428 YEEIIRVTNDFDDEHCIGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEV 486
Y++ D +H +G G G VY+ + VAVK L + +EFL E
Sbjct: 251 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT----LKEDTMEVEEFLKEA 306
Query: 487 KTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKG 546
+ I+H N+V+ G C+ +I+ E++ G+L L + +++ + +
Sbjct: 307 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQ 365
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT-- 604
+ A+ Y+ F +HR+++++N L+ + V+DFG ++ + D+ + AG
Sbjct: 366 ISSAMEYLEKKNF---IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKF 420
Query: 605 -YGYVAPE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIA-LNE 660
+ APE LAY K + K DV++FGVL E+ G P ++++ + E
Sbjct: 421 PIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----------YPGIDLSQVYE 469
Query: 661 ML--DPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
+L D R+ P +K+ +M +C +P RP+ ++ Q +
Sbjct: 470 LLEKDYRMERPE-GCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFE 513
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 132/287 (45%), Gaps = 32/287 (11%)
Query: 428 YEEIIRVTNDFDDEHCIGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEV 486
Y++ D +H +G G G VY+ + VAVK L + +EFL E
Sbjct: 212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT----LKEDTMEVEEFLKEA 267
Query: 487 KTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKG 546
+ I+H N+V+ G C+ +I+ E++ G+L L + +++ + +
Sbjct: 268 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQ 326
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY- 605
+ A+ Y+ F +HR+++++N L+ + V+DFG ++ + D+ A +
Sbjct: 327 ISSAMEYLEKKNF---IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFP 382
Query: 606 -GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIA-LNEM 661
+ APE LAY K + K DV++FGVL E+ G P ++++ + E+
Sbjct: 383 IKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----------YPGIDLSQVYEL 431
Query: 662 L--DPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
L D R+ P +K+ +M +C +P RP+ ++ Q +
Sbjct: 432 LEKDYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFE 474
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G GG V+ A +L VAVK + L + + F E + + H IV Y
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYA 79
Query: 503 FCSHARHS----FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDC 558
+ +IV EY++ +L I+ + + + + VI AL++ H +
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQNG 136
Query: 559 FPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN----WAELAGTYGYVAPELAY 614
I+HRD+ N+++ N V DFG A+ + DS N A + GT Y++PE A
Sbjct: 137 ---IIHRDVKPANIMISATNAVKVMDFGIARAIA-DSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
V + DVYS G + EV+ G+ P
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 444 IGKGGQGSVYKAELPSGE----IVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVK 499
+G G G V+ E S I + K S +P E + E++ L + H NI+K
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPME-----QIEAEIEVLKSLDHPNIIK 84
Query: 500 FYGFCSHARHSFIVYEYLEMGS-LAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDC 558
+ + +IV E E G L I+S A K L ++K +++AL+Y H+
Sbjct: 85 IFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ- 143
Query: 559 FPPIVHRDISSKNVLLDLENEAH----VSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
+VH+D+ +N+L + H + DFG A+ K D + AGT Y+APE+ +
Sbjct: 144 --HVVHKDLKPENILFQ-DTSPHSPIKIIDFGLAELFKSDEHS-TNAAGTALYMAPEV-F 198
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
VT KCD++S GV+ ++ G P
Sbjct: 199 KRDVTFKCDIWSAGVVMYFLLTGCLP 224
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 8/195 (4%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
IG+G G VYKA+ GE A+KK E + E+ L ++H NIVK Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT-IREISILKELKHSNIVKLYDV 68
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+ +V+E+L+ ++ D L + + +++ ++Y H+ ++
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLL---DVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVL 122
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPE-LAYTMKVTEKC 622
HRD+ +N+L++ E E ++DFG A+ + T Y AP+ L + K +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTI 182
Query: 623 DVYSFGVLALEVIKG 637
D++S G + E++ G
Sbjct: 183 DIWSVGCIFAEMVNG 197
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 83/168 (49%), Gaps = 11/168 (6%)
Query: 477 ASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLG 536
A + E L E + + + IV+ G C A +V E E+G L L + KD
Sbjct: 412 ALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD-- 468
Query: 537 WTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSS 596
+ ++ V + Y+ F VHRD++++NVLL ++ A +SDFG +K L+ D +
Sbjct: 469 -KNIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 524
Query: 597 NW-AELAGTY--GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 640
+ A+ G + + APE K + K DV+SFGVL E G+ P
Sbjct: 525 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 8/195 (4%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
IG+G G VYKA+ GE A+KK E + E+ L ++H NIVK Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT-IREISILKELKHSNIVKLYDV 68
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+ +V+E+L+ ++ D L + + +++ ++Y H+ ++
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLL---DVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVL 122
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPE-LAYTMKVTEKC 622
HRD+ +N+L++ E E ++DFG A+ + T Y AP+ L + K +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTI 182
Query: 623 DVYSFGVLALEVIKG 637
D++S G + E++ G
Sbjct: 183 DIWSVGCIFAEMVNG 197
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 118/271 (43%), Gaps = 22/271 (8%)
Query: 441 EHCIGKGGQGSVY--KAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIV 498
E IG G G V + +LP VAV + +++FL E + H N+V
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 499 KFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDC 558
G + + IV E++E G+L L + + + +++G+ + Y+ +
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTV--IQLVGMLRGIAAGMRYLADMG 165
Query: 559 FPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG---TYGYVAPELAYT 615
+ VHRD++++N+L++ VSDFG ++ ++ D G + APE
Sbjct: 166 Y---VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQY 222
Query: 616 MKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQ 674
K T DV+S+G++ EV+ G+ P ++ A+ E RLP P
Sbjct: 223 RKFTSASDVWSYGIVMWEVMSYGERP-----YWDMSNQDVIKAIEEGY--RLPAP----M 271
Query: 675 DKLISIMEVAISCLDESPESRPTIQKVSQLL 705
D + ++ + C + RP +++ +L
Sbjct: 272 DCPAGLHQLMLDCWQKERAERPKFEQIVGIL 302
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 83/168 (49%), Gaps = 11/168 (6%)
Query: 477 ASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLG 536
A + E L E + + + IV+ G C A +V E E+G L L + KD
Sbjct: 413 ALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD-- 469
Query: 537 WTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSS 596
+ ++ V + Y+ F VHRD++++NVLL ++ A +SDFG +K L+ D +
Sbjct: 470 -KNIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 525
Query: 597 NW-AELAGTY--GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 640
+ A+ G + + APE K + K DV+SFGVL E G+ P
Sbjct: 526 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 11/202 (5%)
Query: 443 CIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFY 501
IGKG G V + + ++ A+K + E + E++ + G+ H +V +
Sbjct: 22 AIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLW 81
Query: 502 GFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPP 561
F+V + L G L L + K+ T ++ + + V+ AL Y+ N
Sbjct: 82 YSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEE--TVKLFICELVM-ALDYLQNQ---R 135
Query: 562 IVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMK---V 618
I+HRD+ N+LLD H++DF A L P + +AGT Y+APE+ + K
Sbjct: 136 IIHRDMKPDNILLDEHGHVHITDFNIAAML-PRETQITTMAGTKPYMAPEMFSSRKGAGY 194
Query: 619 TEKCDVYSFGVLALEVIKGKHP 640
+ D +S GV A E+++G+ P
Sbjct: 195 SFAVDWWSLGVTAYELLRGRRP 216
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 8/195 (4%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
IG+G G VYKA+ GE A+KK E + E+ L ++H NIVK Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT-IREISILKELKHSNIVKLYDV 68
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+ +V+E+L+ ++ D L + + +++ ++Y H+ ++
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLL---DVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVL 122
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPE-LAYTMKVTEKC 622
HRD+ +N+L++ E E ++DFG A+ + T Y AP+ L + K +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTI 182
Query: 623 DVYSFGVLALEVIKG 637
D++S G + E++ G
Sbjct: 183 DIWSVGCIFAEMVNG 197
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 12/210 (5%)
Query: 435 TNDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR 493
++ + + +GKG G V + +G+ AVK + ++ L EV+ L +
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 494 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSY 553
H NI+K Y F + ++V E G L + K +I+ V+ ++Y
Sbjct: 91 HPNIMKLYEFFEDKGYFYLVGEVYTGGEL---FDEIISRKRFSEVDAARIIRQVLSGITY 147
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENE---AHVSDFGTAKFLKPDSSNWAELAGTYGYVAP 610
MH + IVHRD+ +N+LL+ +++ + DFG + + S + GT Y+AP
Sbjct: 148 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYIAP 203
Query: 611 ELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
E+ + EKCDV+S GV+ ++ G P
Sbjct: 204 EVLHGT-YDEKCDVWSTGVILYILLSGCPP 232
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G GG V+ A +L VAVK + L + + F E + + H IV Y
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 503 FCSHARHS----FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDC 558
+ +IV EY++ +L I+ + + + + VI AL++ H +
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQNG 136
Query: 559 FPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN----WAELAGTYGYVAPELAY 614
I+HRD+ N+++ N V DFG A+ + DS N A + GT Y++PE A
Sbjct: 137 ---IIHRDVKPANIMISATNAVKVMDFGIARAIA-DSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
V + DVYS G + EV+ G+ P
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 105/220 (47%), Gaps = 14/220 (6%)
Query: 428 YEEIIRVTNDFDDEHCIGKGGQ-GSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEV 486
YE + R N D IG+ G G VYKA+ ++A K E ++++ E+
Sbjct: 1 YEHVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEE--ELEDYMVEI 58
Query: 487 KTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKG 546
L H NIVK + + +I+ E+ G++ ++ + L ++ V K
Sbjct: 59 DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LERPLTESQIQVVCKQ 116
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFG-TAKFLKPDSSNWAELAGTY 605
+DAL+Y+H++ I+HRD+ + N+L L+ + ++DFG +AK + GT
Sbjct: 117 TLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTP 173
Query: 606 GYVAPELAYTMKVTE-----KCDVYSFGVLALEVIKGKHP 640
++APE+ + K DV+S G+ +E+ + + P
Sbjct: 174 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 83/168 (49%), Gaps = 11/168 (6%)
Query: 477 ASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLG 536
A + E L E + + + IV+ G C A +V E E+G L L + KD
Sbjct: 54 ALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD-- 110
Query: 537 WTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSS 596
+ ++ V + Y+ F VHRD++++NVLL ++ A +SDFG +K L+ D +
Sbjct: 111 -KNIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 166
Query: 597 NW-AELAGTY--GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 640
+ A+ G + + APE K + K DV+SFGVL E G+ P
Sbjct: 167 XYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G GG V+ A +L VAVK + L + + F E + + H IV Y
Sbjct: 37 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 96
Query: 503 FCSHARHS----FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDC 558
+ +IV EY++ +L I+ + + + + VI AL++ H +
Sbjct: 97 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQNG 153
Query: 559 FPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN----WAELAGTYGYVAPELAY 614
I+HRD+ N+++ N V DFG A+ + DS N A + GT Y++PE A
Sbjct: 154 ---IIHRDVKPANIMISATNAVKVMDFGIARAIA-DSGNSVTQTAAVIGTAQYLSPEQAR 209
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
V + DVYS G + EV+ G+ P
Sbjct: 210 GDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 123/268 (45%), Gaps = 18/268 (6%)
Query: 436 NDFDDEHCIGKGGQGSVYK-AELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+DF+ +G G G V+K + PSG ++A K H L + A + + + E++ L
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRNQIIRELQVLHECNS 82
Query: 495 RNIVKFYG-FCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSY 553
IV FYG F S S I E+++ GSL +L + K V V+ L+Y
Sbjct: 83 PYIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKKAGRIPEQILGK---VSIAVIKGLTY 138
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELA 613
+ I+HRD+ N+L++ E + DFG + L +N GT Y++PE
Sbjct: 139 LREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERL 194
Query: 614 YTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNV 673
+ + D++S G+ +E+ G++P L+ +NE P+LP+ ++
Sbjct: 195 QGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEP-PPKLPSGVFSL 253
Query: 674 QDKLISIMEVAISCLDESPESRPTIQKV 701
+ + CL ++P R ++++
Sbjct: 254 E-----FQDFVNKCLIKNPAERADLKQL 276
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 19/259 (7%)
Query: 444 IGKGGQGSVYK-AELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+GKGG ++ ++ + E+ A K L + +++ E+ + H+++V F+G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 503 FCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPI 562
F F+V E SL L K L + ++ +V Y+H + +
Sbjct: 85 FFEDNDFVFVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 138
Query: 563 VHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKC 622
+HRD+ N+ L+ + E + DFG A ++ D L GT Y+APE+ + +
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEV 198
Query: 623 DVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISIME 682
DV+S G + ++ GK P + L I NE P+ P V LI M
Sbjct: 199 DVWSIGCIMYTLLVGKPPFE---TSCLKETYLRIKKNEYSIPKHINP---VAASLIQKM- 251
Query: 683 VAISCLDESPESRPTIQKV 701
L P +RPTI ++
Sbjct: 252 -----LQTDPTARPTINEL 265
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 83/168 (49%), Gaps = 11/168 (6%)
Query: 477 ASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLG 536
A + E L E + + + IV+ G C A +V E E+G L L + KD
Sbjct: 68 ALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD-- 124
Query: 537 WTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSS 596
+ ++ V + Y+ F VHRD++++NVLL ++ A +SDFG +K L+ D +
Sbjct: 125 -KNIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 180
Query: 597 NW-AELAGTY--GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 640
+ A+ G + + APE K + K DV+SFGVL E G+ P
Sbjct: 181 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 19/259 (7%)
Query: 444 IGKGGQGSVYK-AELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+GKGG ++ ++ + E+ A K L + +++ E+ + H+++V F+G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 503 FCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPI 562
F F+V E SL L K L + ++ +V Y+H + +
Sbjct: 85 FFEDNDFVFVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 138
Query: 563 VHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKC 622
+HRD+ N+ L+ + E + DFG A ++ D L GT Y+APE+ + +
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEV 198
Query: 623 DVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISIME 682
DV+S G + ++ GK P + L I NE P+ P V LI M
Sbjct: 199 DVWSIGCIMYTLLVGKPPFE---TSCLKETYLRIKKNEYSIPKHINP---VAASLIQKM- 251
Query: 683 VAISCLDESPESRPTIQKV 701
L P +RPTI ++
Sbjct: 252 -----LQTDPTARPTINEL 265
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 83/168 (49%), Gaps = 11/168 (6%)
Query: 477 ASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLG 536
A + E L E + + + IV+ G C A +V E E+G L L + KD
Sbjct: 60 ALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD-- 116
Query: 537 WTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSS 596
+ ++ V + Y+ F VHRD++++NVLL ++ A +SDFG +K L+ D +
Sbjct: 117 -KNIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 172
Query: 597 NW-AELAGTY--GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 640
+ A+ G + + APE K + K DV+SFGVL E G+ P
Sbjct: 173 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 83/168 (49%), Gaps = 11/168 (6%)
Query: 477 ASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLG 536
A + E L E + + + IV+ G C A +V E E+G L L + KD
Sbjct: 54 ALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD-- 110
Query: 537 WTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSS 596
+ ++ V + Y+ F VHRD++++NVLL ++ A +SDFG +K L+ D +
Sbjct: 111 -KNIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 166
Query: 597 NW-AELAGTY--GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 640
+ A+ G + + APE K + K DV+SFGVL E G+ P
Sbjct: 167 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 83/168 (49%), Gaps = 11/168 (6%)
Query: 477 ASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLG 536
A + E L E + + + IV+ G C A +V E E+G L L + KD
Sbjct: 48 ALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD-- 104
Query: 537 WTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSS 596
+ ++ V + Y+ F VHRD++++NVLL ++ A +SDFG +K L+ D +
Sbjct: 105 -KNIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 160
Query: 597 NW-AELAGTY--GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 640
+ A+ G + + APE K + K DV+SFGVL E G+ P
Sbjct: 161 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 102/235 (43%), Gaps = 42/235 (17%)
Query: 432 IRVTNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLT 490
+R +DF++ +G+G G V KA A+KK E S L+EV L
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT--EEKLST--ILSEVMLLA 57
Query: 491 GIRHRNIVKFYGFCSHARHS-------------FIVYEYLEMGSLAMIL--SNDAAAKDL 535
+ H+ +V++Y R+ FI EY E +L ++ N +D
Sbjct: 58 SLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDE 117
Query: 536 GWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAK------ 589
W + + +++ALSY+H+ I+HRD+ N+ +D + DFG AK
Sbjct: 118 YW----RLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 590 -FLKPDSS-------NWAELAGTYGYVAPE-LAYTMKVTEKCDVYSFGVLALEVI 635
LK DS N GT YVA E L T EK D+YS G++ E+I
Sbjct: 171 DILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 12/210 (5%)
Query: 435 TNDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR 493
++ + + +GKG G V + +G+ AVK + ++ L EV+ L +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 494 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSY 553
H NI+K Y F + ++V E G L + K +I+ V+ ++Y
Sbjct: 85 HPNIMKLYEFFEDKGYFYLVGEVYTGGEL---FDEIISRKRFSEVDAARIIRQVLSGITY 141
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEA---HVSDFGTAKFLKPDSSNWAELAGTYGYVAP 610
MH + IVHRD+ +N+LL+ +++ + DFG + + S + GT Y+AP
Sbjct: 142 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYIAP 197
Query: 611 ELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
E+ + EKCDV+S GV+ ++ G P
Sbjct: 198 EVLHGT-YDEKCDVWSTGVILYILLSGCPP 226
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 83/168 (49%), Gaps = 11/168 (6%)
Query: 477 ASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLG 536
A + E L E + + + IV+ G C A +V E E+G L L + KD
Sbjct: 50 ALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD-- 106
Query: 537 WTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSS 596
+ ++ V + Y+ F VHRD++++NVLL ++ A +SDFG +K L+ D +
Sbjct: 107 -KNIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 162
Query: 597 NW-AELAGTY--GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 640
+ A+ G + + APE K + K DV+SFGVL E G+ P
Sbjct: 163 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 83/168 (49%), Gaps = 11/168 (6%)
Query: 477 ASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLG 536
A + E L E + + + IV+ G C A +V E E+G L L + KD
Sbjct: 70 ALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD-- 126
Query: 537 WTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSS 596
+ ++ V + Y+ F VHRD++++NVLL ++ A +SDFG +K L+ D +
Sbjct: 127 -KNIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 182
Query: 597 NW-AELAGTY--GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 640
+ A+ G + + APE K + K DV+SFGVL E G+ P
Sbjct: 183 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 83/168 (49%), Gaps = 11/168 (6%)
Query: 477 ASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLG 536
A + E L E + + + IV+ G C A +V E E+G L L + KD
Sbjct: 70 ALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD-- 126
Query: 537 WTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSS 596
+ ++ V + Y+ F VHRD++++NVLL ++ A +SDFG +K L+ D +
Sbjct: 127 -KNIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 182
Query: 597 NW-AELAGTY--GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 640
+ A+ G + + APE K + K DV+SFGVL E G+ P
Sbjct: 183 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 19/259 (7%)
Query: 444 IGKGGQGSVYK-AELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+GKGG ++ ++ + E+ A K L + +++ E+ + H+++V F+G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 503 FCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPI 562
F F+V E SL L K L + ++ +V Y+H + +
Sbjct: 89 FFEDNDFVFVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 142
Query: 563 VHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKC 622
+HRD+ N+ L+ + E + DFG A ++ D L GT Y+APE+ + +
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEV 202
Query: 623 DVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISIME 682
DV+S G + ++ GK P + L I NE P+ P V LI M
Sbjct: 203 DVWSIGCIMYTLLVGKPPFE---TSCLKETYLRIKKNEYSIPKHINP---VAASLIQKM- 255
Query: 683 VAISCLDESPESRPTIQKV 701
L P +RPTI ++
Sbjct: 256 -----LQTDPTARPTINEL 269
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 117/274 (42%), Gaps = 17/274 (6%)
Query: 437 DFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHR 495
+F E IG+G VY+A L G VA+KK + ++ + + E+ L + H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 496 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVD---ALS 552
N++K+Y IV E + G L+ ++ + K L V K V AL
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRL--IPERTVWKYFVQLCSALE 150
Query: 553 YMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPEL 612
+MH+ ++HRDI NV + + D G +F ++ L GT Y++PE
Sbjct: 151 HMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPER 207
Query: 613 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHN 672
+ K D++S G L E+ + P +L + + P P PS +
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEMAALQSP---FYGDKMNLYSLCKKIEQCDYP--PLPSDH 262
Query: 673 VQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
++L ++ + C++ PE RP + V + K
Sbjct: 263 YSEELRQLVNM---CINPDPEKRPDVTYVYDVAK 293
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 106/229 (46%), Gaps = 15/229 (6%)
Query: 420 LSFEGKIVYEEIIRVTNDFDDEHCIGKGGQGS---VYKAELPSGEIVAVKKFHSPLPSEM 476
L F+ YE + R N D IG+ G G+ VYKA+ ++A K E
Sbjct: 18 LYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEE- 76
Query: 477 ASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLG 536
++++ E+ L H NIVK + + +I+ E+ G++ ++ + L
Sbjct: 77 -ELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LERPLT 133
Query: 537 WTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSS 596
++ V K +DAL+Y+H++ I+HRD+ + N+L L+ + ++DFG +
Sbjct: 134 ESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQ 190
Query: 597 NWAELAGTYGYVAPELAYTMKVTE-----KCDVYSFGVLALEVIKGKHP 640
GT ++APE+ + K DV+S G+ +E+ + + P
Sbjct: 191 RRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 12/210 (5%)
Query: 435 TNDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR 493
++ + + +GKG G V + +G+ AVK + ++ L EV+ L +
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 494 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSY 553
H NI+K Y F + ++V E G L + K +I+ V+ ++Y
Sbjct: 109 HPNIMKLYEFFEDKGYFYLVGEVYTGGEL---FDEIISRKRFSEVDAARIIRQVLSGITY 165
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEA---HVSDFGTAKFLKPDSSNWAELAGTYGYVAP 610
MH + IVHRD+ +N+LL+ +++ + DFG + + S + GT Y+AP
Sbjct: 166 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYIAP 221
Query: 611 ELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
E+ + EKCDV+S GV+ ++ G P
Sbjct: 222 EVLHGT-YDEKCDVWSTGVILYILLSGCPP 250
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 106/229 (46%), Gaps = 15/229 (6%)
Query: 420 LSFEGKIVYEEIIRVTNDFDDEHCIGKGGQGS---VYKAELPSGEIVAVKKFHSPLPSEM 476
L F+ YE + R N D IG+ G G+ VYKA+ ++A K E
Sbjct: 18 LYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEE- 76
Query: 477 ASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLG 536
++++ E+ L H NIVK + + +I+ E+ G++ ++ + L
Sbjct: 77 -ELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LERPLT 133
Query: 537 WTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSS 596
++ V K +DAL+Y+H++ I+HRD+ + N+L L+ + ++DFG +
Sbjct: 134 ESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQ 190
Query: 597 NWAELAGTYGYVAPELAYTMKVTE-----KCDVYSFGVLALEVIKGKHP 640
GT ++APE+ + K DV+S G+ +E+ + + P
Sbjct: 191 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 131/304 (43%), Gaps = 53/304 (17%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNE--VKTLTGIRHRNIVKFY 501
IG+G G+VYK L VAVK F A++Q F+NE + + + H NI +F
Sbjct: 21 IGRGRYGAVYKGSLDE-RPVAVKVFS------FANRQNFINEKNIYRVPLMEHDNIARFI 73
Query: 502 ----GFCSHARHSFI-VYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHN 556
+ R ++ V EY GSL LS + W + V L+Y+H
Sbjct: 74 VGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS----DWVSSCRLAHSVTRGLAYLHT 129
Query: 557 DC------FPPIVHRDISSKNVLLDLENEAHVSDFGTA------KFLKPDSSNWAELA-- 602
+ P I HRD++S+NVL+ + +SDFG + + ++P + A ++
Sbjct: 130 ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEV 189
Query: 603 GTYGYVAPEL---AYTMKVTE----KCDVYSFGVLALEV-------IKGKHPRDFXXXXX 648
GT Y+APE+ A ++ E + D+Y+ G++ E+ G+ ++
Sbjct: 190 GTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQ 249
Query: 649 XXXXN------LEIALN-EMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKV 701
N +++ ++ E P+ P + S+ E C D+ E+R T Q
Sbjct: 250 TEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXA 309
Query: 702 SQLL 705
+ +
Sbjct: 310 EERM 313
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 12/210 (5%)
Query: 435 TNDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR 493
++ + + +GKG G V + +G+ AVK + ++ L EV+ L +
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 494 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSY 553
H NI+K Y F + ++V E G L + K +I+ V+ ++Y
Sbjct: 108 HPNIMKLYEFFEDKGYFYLVGEVYTGGEL---FDEIISRKRFSEVDAARIIRQVLSGITY 164
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEA---HVSDFGTAKFLKPDSSNWAELAGTYGYVAP 610
MH + IVHRD+ +N+LL+ +++ + DFG + + S + GT Y+AP
Sbjct: 165 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYIAP 220
Query: 611 ELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
E+ + EKCDV+S GV+ ++ G P
Sbjct: 221 EVLHGT-YDEKCDVWSTGVILYILLSGCPP 249
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 19/259 (7%)
Query: 444 IGKGGQGSVYK-AELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+GKGG ++ ++ + E+ A K L + +++ E+ + H+++V F+G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 503 FCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPI 562
F F+V E SL L K L + ++ +V Y+H + +
Sbjct: 83 FFEDNDFVFVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 136
Query: 563 VHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKC 622
+HRD+ N+ L+ + E + DFG A ++ D L GT Y+APE+ + +
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 196
Query: 623 DVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISIME 682
DV+S G + ++ GK P + L I NE P+ P V LI M
Sbjct: 197 DVWSIGCIMYTLLVGKPPFE---TSCLKETYLRIKKNEYSIPKHINP---VAASLIQKM- 249
Query: 683 VAISCLDESPESRPTIQKV 701
L P +RPTI ++
Sbjct: 250 -----LQTDPTARPTINEL 263
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 106/229 (46%), Gaps = 15/229 (6%)
Query: 420 LSFEGKIVYEEIIRVTNDFDDEHCIGKGGQGS---VYKAELPSGEIVAVKKFHSPLPSEM 476
L F+ YE + R N D IG+ G G+ VYKA+ ++A K E
Sbjct: 18 LYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEE- 76
Query: 477 ASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLG 536
++++ E+ L H NIVK + + +I+ E+ G++ ++ + L
Sbjct: 77 -ELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LERPLT 133
Query: 537 WTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSS 596
++ V K +DAL+Y+H++ I+HRD+ + N+L L+ + ++DFG +
Sbjct: 134 ESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ 190
Query: 597 NWAELAGTYGYVAPELAYTMKVTE-----KCDVYSFGVLALEVIKGKHP 640
GT ++APE+ + K DV+S G+ +E+ + + P
Sbjct: 191 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 19/259 (7%)
Query: 444 IGKGGQGSVYK-AELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+GKGG ++ ++ + E+ A K L + +++ E+ + H+++V F+G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 503 FCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPI 562
F F+V E SL L K L + ++ +V Y+H + +
Sbjct: 107 FFEDNDFVFVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 160
Query: 563 VHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKC 622
+HRD+ N+ L+ + E + DFG A ++ D L GT Y+APE+ + +
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 220
Query: 623 DVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISIME 682
DV+S G + ++ GK P + L I NE P+ P V LI M
Sbjct: 221 DVWSIGCIMYTLLVGKPPFE---TSCLKETYLRIKKNEYSIPKHINP---VAASLIQKM- 273
Query: 683 VAISCLDESPESRPTIQKV 701
L P +RPTI ++
Sbjct: 274 -----LQTDPTARPTINEL 287
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 118/276 (42%), Gaps = 26/276 (9%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
D +H +G G G VY + VAVK L + +EFL E + I+H
Sbjct: 32 TDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKT----LKEDTMEVEEFLKEAAVMKEIKH 87
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
N+V+ G C+ +IV EY+ G+L L + +++ + + + A+ Y+
Sbjct: 88 PNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL-RECNREEVTAVVLLYMATQISSAMEYL 146
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPE- 611
F +HRD++++N L+ + V+DFG ++ + D+ A + + APE
Sbjct: 147 EKKNF---IHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTAPES 202
Query: 612 LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPS 670
LAY + K DV++FGVL E+ G P + +L M P P
Sbjct: 203 LAYN-TFSIKSDVWAFGVLLWEIATYGMSP--YPGIDLSQVYDLLEKGYRMEQPEGCPP- 258
Query: 671 HNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
+ E+ +C SP RP+ + Q +
Sbjct: 259 --------KVYELMRACWKWSPADRPSFAETHQAFE 286
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 19/259 (7%)
Query: 444 IGKGGQGSVYK-AELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+GKGG ++ ++ + E+ A K L + +++ E+ + H+++V F+G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 503 FCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPI 562
F F+V E SL L K L + ++ +V Y+H + +
Sbjct: 109 FFEDNDFVFVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 162
Query: 563 VHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKC 622
+HRD+ N+ L+ + E + DFG A ++ D L GT Y+APE+ + +
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 222
Query: 623 DVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISIME 682
DV+S G + ++ GK P + L I NE P+ P V LI M
Sbjct: 223 DVWSIGCIMYTLLVGKPPFE---TSCLKETYLRIKKNEYSIPKHINP---VAASLIQKM- 275
Query: 683 VAISCLDESPESRPTIQKV 701
L P +RPTI ++
Sbjct: 276 -----LQTDPTARPTINEL 289
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 116/262 (44%), Gaps = 28/262 (10%)
Query: 459 SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFI--VYEY 516
+GE+VAVK + + S + E+ L + H +I+K+ G C A + + V EY
Sbjct: 59 TGEMVAVKALKADAGPQHRSG--WKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEY 116
Query: 517 LEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDL 576
+ +GSL L + +G + + + + + ++Y+H + +HRD++++NVLLD
Sbjct: 117 VPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHAQHY---IHRDLAARNVLLDN 169
Query: 577 ENEAHVSDFGTAKFLKPDSSNW---AELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALE 633
+ + DFG AK + + + + APE K DV+SFGV E
Sbjct: 170 DRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYE 229
Query: 634 VI-----KGKHPRDFXXXXXXXXXNLEI-ALNEMLD--PRLPTPSHNVQDKL-ISIMEVA 684
++ P F + + L E+L+ RLP P DK + +
Sbjct: 230 LLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRP-----DKCPAEVYHLM 284
Query: 685 ISCLDESPESRPTIQKVSQLLK 706
+C + RPT + + +LK
Sbjct: 285 KNCWETEASFRPTFENLIPILK 306
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 91/209 (43%), Gaps = 13/209 (6%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
NDFD +GKG G V E +G A+K + + E + L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 495 RNIVKF-YGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKG--VVDAL 551
+ Y F +H R F++ EY G L LS + +T+ G +V AL
Sbjct: 65 PFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERV-----FTEERARFYGAEIVSAL 118
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPE 611
Y+H+ +V+RDI +N++LD + ++DFG K D + GT Y+APE
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE 175
Query: 612 LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
+ D + GV+ E++ G+ P
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 91/209 (43%), Gaps = 13/209 (6%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
NDFD +GKG G V E +G A+K + + E + L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 495 RNIVKF-YGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKG--VVDAL 551
+ Y F +H R F++ EY G L LS + +T+ G +V AL
Sbjct: 65 PFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERV-----FTEERARFYGAEIVSAL 118
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPE 611
Y+H+ +V+RDI +N++LD + ++DFG K D + GT Y+APE
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 612 LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
+ D + GV+ E++ G+ P
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 91/209 (43%), Gaps = 13/209 (6%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
NDFD +GKG G V E +G A+K + + E + L RH
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 495 RNIVKF-YGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKG--VVDAL 551
+ Y F +H R F++ EY G L LS + +T+ G +V AL
Sbjct: 68 PFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERV-----FTEERARFYGAEIVSAL 121
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPE 611
Y+H+ +V+RDI +N++LD + ++DFG K D + GT Y+APE
Sbjct: 122 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE 178
Query: 612 LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
+ D + GV+ E++ G+ P
Sbjct: 179 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 91/209 (43%), Gaps = 13/209 (6%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
NDFD +GKG G V E +G A+K + + E + L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 495 RNIVKF-YGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKG--VVDAL 551
+ Y F +H R F++ EY G L LS + +T+ G +V AL
Sbjct: 65 PFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERV-----FTEERARFYGAEIVSAL 118
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPE 611
Y+H+ +V+RDI +N++LD + ++DFG K D + GT Y+APE
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 612 LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
+ D + GV+ E++ G+ P
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 91/209 (43%), Gaps = 13/209 (6%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
NDFD +GKG G V E +G A+K + + E + L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 495 RNIVKF-YGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKG--VVDAL 551
+ Y F +H R F++ EY G L LS + +T+ G +V AL
Sbjct: 65 PFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERV-----FTEERARFYGAEIVSAL 118
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPE 611
Y+H+ +V+RDI +N++LD + ++DFG K D + GT Y+APE
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE 175
Query: 612 LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
+ D + GV+ E++ G+ P
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 122/274 (44%), Gaps = 24/274 (8%)
Query: 436 NDFDDEHCIGKGGQGSVYK-AELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+DF+ +G G G V+K + PSG ++A K H L + A + + + E++ L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRNQIIRELQVLHECNS 63
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
IV FYG I E+++ GSL +L + K V V+ L+Y+
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---VSIAVIKGLTYL 120
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
I+HRD+ N+L++ E + DFG + L +N GT Y++PE
Sbjct: 121 REKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERLQ 176
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLD-------PRLP 667
+ + D++S G+ +E+ G++P +A+ E+LD P+LP
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYP--IPPPDAKEDSRPPMAIFELLDYIVNEPPPKLP 234
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKV 701
+ +++ + CL ++P R ++++
Sbjct: 235 SGVFSLE-----FQDFVNKCLIKNPAERADLKQL 263
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 91/209 (43%), Gaps = 13/209 (6%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
NDFD +GKG G V E +G A+K + + E + L RH
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 69
Query: 495 RNIVKF-YGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKG--VVDAL 551
+ Y F +H R F++ EY G L LS + +T+ G +V AL
Sbjct: 70 PFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERV-----FTEERARFYGAEIVSAL 123
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPE 611
Y+H+ +V+RDI +N++LD + ++DFG K D + GT Y+APE
Sbjct: 124 EYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE 180
Query: 612 LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
+ D + GV+ E++ G+ P
Sbjct: 181 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 91/209 (43%), Gaps = 13/209 (6%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
NDFD +GKG G V E +G A+K + + E + L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 495 RNIVKF-YGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKG--VVDAL 551
+ Y F +H R F++ EY G L LS + +T+ G +V AL
Sbjct: 65 PFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERV-----FTEERARFYGAEIVSAL 118
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPE 611
Y+H+ +V+RDI +N++LD + ++DFG K D + GT Y+APE
Sbjct: 119 EYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 612 LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
+ D + GV+ E++ G+ P
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 91/202 (45%), Gaps = 14/202 (6%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
IG G G+VYK + V + K P P + Q F NEV L RH NI+ F G+
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQF---QAFRNEVAVLRKTRHVNILLFMGY 100
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+ + IV ++ E SL L + + +++ + + Y+H I+
Sbjct: 101 MTKDNLA-IVTQWCEGSSLYKHLHVQETKFQM--FQLIDIARQTAQGMDYLHAKN---II 154
Query: 564 HRDISSKNVLLDLENEAHVSDFG--TAKFLKPDSSNWAELAGTYGYVAPELAYTMK---V 618
HRD+ S N+ L + DFG T K S + G+ ++APE+
Sbjct: 155 HRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPF 214
Query: 619 TEKCDVYSFGVLALEVIKGKHP 640
+ + DVYS+G++ E++ G+ P
Sbjct: 215 SFQSDVYSYGIVLYELMTGELP 236
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 10/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+DF+ +G G G V K + PSG I+A K H L + A + + + E++ L
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIH--LEIKPAIRNQIIRELQVLHECNS 73
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
IV FYG I E+++ GSL +L AK + V V+ L+Y+
Sbjct: 74 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKE---AKRIPEEILGKVSIAVLRGLAYL 130
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
I+HRD+ N+L++ E + DFG + L +N GT Y+APE
Sbjct: 131 REKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMAPERLQ 186
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
+ + D++S G+ +E+ G++P
Sbjct: 187 GTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 127/281 (45%), Gaps = 29/281 (10%)
Query: 430 EIIRVTNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKF-HSPLPSEMASQQEFLNEVK 487
E IR DF D +G G V AE + ++VA+K L + S + NE+
Sbjct: 14 EDIRDIYDFRD--VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME---NEIA 68
Query: 488 TLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKR--MNVIK 545
L I+H NIV H +++ + + G L D + +T+R +I
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF-----DRIVEKGFYTERDASRLIF 123
Query: 546 GVVDALSYMHNDCFPPIVHRDISSKNVL---LDLENEAHVSDFGTAKFLKPDSSNWAELA 602
V+DA+ Y+H+ IVHRD+ +N+L LD +++ +SDFG +K P S +
Sbjct: 124 QVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP-GSVLSTAC 179
Query: 603 GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEML 662
GT GYVAPE+ ++ D +S GV+A ++ G +P + + A E
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG-YPPFYDENDAKLFEQILKAEYEFD 238
Query: 663 DPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703
P S + +D + +ME + PE R T ++ Q
Sbjct: 239 SPYWDDISDSAKDFIRHLME-------KDPEKRFTCEQALQ 272
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 114/262 (43%), Gaps = 28/262 (10%)
Query: 459 SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHA--RHSFIVYEY 516
+GE+VAVK ++ S + E++ L + H +IVK+ G C + +V EY
Sbjct: 36 TGEMVAVKALKEGCGPQLRSGWQ--REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEY 93
Query: 517 LEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDL 576
+ +GSL L +G + + + + + ++Y+H + +HR ++++NVLLD
Sbjct: 94 VPLGSLRDYLPRHC----VGLAQLLLFAQQICEGMAYLHAQHY---IHRALAARNVLLDN 146
Query: 577 ENEAHVSDFGTAKFLKPDSSNWAELA----GTYGYVAPELAYTMKVTEKCDVYSFGVLAL 632
+ + DFG AK + P+ + + + APE K DV+SFGV
Sbjct: 147 DRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLY 205
Query: 633 EVI------KGKHPRDFXXXXXXXXXNLEIALNEMLD--PRLPTPSHNVQDKLISIMEVA 684
E++ + H + + L E+L+ RLP P I +
Sbjct: 206 ELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCP----CEIYHLM 261
Query: 685 ISCLDESPESRPTIQKVSQLLK 706
+C + RPT Q + +L+
Sbjct: 262 KNCWETEASFRPTFQNLVPILQ 283
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 101/221 (45%), Gaps = 35/221 (15%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR-HRNIVKFY 501
+GKG G V+K+ + +GE+VAVKK + +Q+ F E+ LT + H NIV
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTF-REIMILTELSGHENIVNLL 75
Query: 502 GF--CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCF 559
+ R ++V++Y+E A+I +N L + V+ ++ + Y+H+
Sbjct: 76 NVLRADNDRDVYLVFDYMETDLHAVIRANI-----LEPVHKQYVVYQLIKVIKYLHSGG- 129
Query: 560 PPIVHRDISSKNVLLDLENEAHVSDFGTAKF---------------------LKPDSSNW 598
++HRD+ N+LL+ E V+DFG ++ D
Sbjct: 130 --LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPIL 187
Query: 599 AELAGTYGYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGK 638
+ T Y APE L + K T+ D++S G + E++ GK
Sbjct: 188 TDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 114/262 (43%), Gaps = 28/262 (10%)
Query: 459 SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHA--RHSFIVYEY 516
+GE+VAVK ++ S + E++ L + H +IVK+ G C + +V EY
Sbjct: 37 TGEMVAVKALKEGCGPQLRSGWQ--REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEY 94
Query: 517 LEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDL 576
+ +GSL L +G + + + + + ++Y+H + +HR ++++NVLLD
Sbjct: 95 VPLGSLRDYLPRHC----VGLAQLLLFAQQICEGMAYLHAQHY---IHRALAARNVLLDN 147
Query: 577 ENEAHVSDFGTAKFLKPDSSNWAELA----GTYGYVAPELAYTMKVTEKCDVYSFGVLAL 632
+ + DFG AK + P+ + + + APE K DV+SFGV
Sbjct: 148 DRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLY 206
Query: 633 EVI------KGKHPRDFXXXXXXXXXNLEIALNEMLD--PRLPTPSHNVQDKLISIMEVA 684
E++ + H + + L E+L+ RLP P I +
Sbjct: 207 ELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCP----CEIYHLM 262
Query: 685 ISCLDESPESRPTIQKVSQLLK 706
+C + RPT Q + +L+
Sbjct: 263 KNCWETEASFRPTFQNLVPILQ 284
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 118/263 (44%), Gaps = 30/263 (11%)
Query: 459 SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHA--RHSFIVYEY 516
+GE+VAVK + + S + E+ L + H +I+K+ G C + +V EY
Sbjct: 42 TGEMVAVKALKADCGPQHRSG--WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEY 99
Query: 517 LEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDL 576
+ +GSL L + +G + + + + + ++Y+H+ + +HR+++++NVLLD
Sbjct: 100 VPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHSQHY---IHRNLAARNVLLDN 152
Query: 577 ENEAHVSDFGTAKFLKPDSSNWAELA----GTYGYVAPELAYTMKVTEKCDVYSFGVLAL 632
+ + DFG AK + P+ + + + APE K DV+SFGV
Sbjct: 153 DRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLY 211
Query: 633 EVI-----KGKHPRDFXXXXXXXXXNLEI-ALNEMLD--PRLPTPSHNVQDKL-ISIMEV 683
E++ P F + + L E+L+ RLP P DK + +
Sbjct: 212 ELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRP-----DKCPCEVYHL 266
Query: 684 AISCLDESPESRPTIQKVSQLLK 706
+C + RPT + + +LK
Sbjct: 267 MKNCWETEASFRPTFENLIPILK 289
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 127/281 (45%), Gaps = 29/281 (10%)
Query: 430 EIIRVTNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKF-HSPLPSEMASQQEFLNEVK 487
E IR DF D +G G V AE + ++VA+K L + S + NE+
Sbjct: 14 EDIRDIYDFRD--VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME---NEIA 68
Query: 488 TLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKR--MNVIK 545
L I+H NIV H +++ + + G L D + +T+R +I
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF-----DRIVEKGFYTERDASRLIF 123
Query: 546 GVVDALSYMHNDCFPPIVHRDISSKNVL---LDLENEAHVSDFGTAKFLKPDSSNWAELA 602
V+DA+ Y+H+ IVHRD+ +N+L LD +++ +SDFG +K P S +
Sbjct: 124 QVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP-GSVLSTAC 179
Query: 603 GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEML 662
GT GYVAPE+ ++ D +S GV+A ++ G +P + + A E
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG-YPPFYDENDAKLFEQILKAEYEFD 238
Query: 663 DPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703
P S + +D + +ME + PE R T ++ Q
Sbjct: 239 SPYWDDISDSAKDFIRHLME-------KDPEKRFTCEQALQ 272
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 42/235 (17%)
Query: 432 IRVTNDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLT 490
+R +DF++ +G+G G V KA A+KK E S L+EV L
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT--EEKLST--ILSEVXLLA 57
Query: 491 GIRHRNIVKFYGFCSHARHS-------------FIVYEYLEMGSLAMIL--SNDAAAKDL 535
+ H+ +V++Y R+ FI EY E +L ++ N +D
Sbjct: 58 SLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDE 117
Query: 536 GWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAK------ 589
W + + +++ALSY+H+ I+HR++ N+ +D + DFG AK
Sbjct: 118 YW----RLFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 590 -FLKPDSS-------NWAELAGTYGYVAPE-LAYTMKVTEKCDVYSFGVLALEVI 635
LK DS N GT YVA E L T EK D YS G++ E I
Sbjct: 171 DILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 10/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYK-AELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+DF+ +G G G V+K + PSG ++A K H L + A + + + E++ L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRNQIIRELQVLHECNS 63
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
IV FYG I E+++ GSL +L + K V V+ L+Y+
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---VSIAVIKGLTYL 120
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
I+HRD+ N+L++ E + DFG + L +N GT Y++PE
Sbjct: 121 REKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERLQ 176
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
+ + D++S G+ +E+ G++P
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 10/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYK-AELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+DF+ +G G G V+K + PSG ++A K H L + A + + + E++ L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRNQIIRELQVLHECNS 63
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
IV FYG I E+++ GSL +L + K V V+ L+Y+
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---VSIAVIKGLTYL 120
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
I+HRD+ N+L++ E + DFG + L +N GT Y++PE
Sbjct: 121 REK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERLQ 176
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
+ + D++S G+ +E+ G++P
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 10/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYK-AELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+DF+ +G G G V+K + PSG ++A K H L + A + + + E++ L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRNQIIRELQVLHECNS 63
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
IV FYG I E+++ GSL +L + K V V+ L+Y+
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---VSIAVIKGLTYL 120
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
I+HRD+ N+L++ E + DFG + L +N GT Y++PE
Sbjct: 121 REK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERLQ 176
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
+ + D++S G+ +E+ G++P
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 127/281 (45%), Gaps = 29/281 (10%)
Query: 430 EIIRVTNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKF-HSPLPSEMASQQEFLNEVK 487
E IR DF D +G G V AE + ++VA+K L + S + NE+
Sbjct: 14 EDIRDIYDFRD--VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME---NEIA 68
Query: 488 TLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKR--MNVIK 545
L I+H NIV H +++ + + G L D + +T+R +I
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF-----DRIVEKGFYTERDASRLIF 123
Query: 546 GVVDALSYMHNDCFPPIVHRDISSKNVL---LDLENEAHVSDFGTAKFLKPDSSNWAELA 602
V+DA+ Y+H+ IVHRD+ +N+L LD +++ +SDFG +K P S +
Sbjct: 124 QVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP-GSVLSTAC 179
Query: 603 GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEML 662
GT GYVAPE+ ++ D +S GV+A ++ G +P + + A E
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG-YPPFYDENDAKLFEQILKAEYEFD 238
Query: 663 DPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703
P S + +D + +ME + PE R T ++ Q
Sbjct: 239 SPYWDDISDSAKDFIRHLME-------KDPEKRFTCEQALQ 272
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 12/207 (5%)
Query: 436 NDFDDEHCIGKGGQGSVYK-AELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+DF+ +G G G V+K + PSG ++A K H L + A + + + E++ L
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRNQIIRELQVLHECNS 90
Query: 495 RNIVKFYG-FCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSY 553
IV FYG F S S I E+++ GSL +L + K V V+ L+Y
Sbjct: 91 PYIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKKAGRIPEQILGK---VSIAVIKGLTY 146
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELA 613
+ I+HRD+ N+L++ E + DFG + L +N GT Y++PE
Sbjct: 147 LREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERL 202
Query: 614 YTMKVTEKCDVYSFGVLALEVIKGKHP 640
+ + D++S G+ +E+ G++P
Sbjct: 203 QGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 10/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYK-AELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+DF+ +G G G V+K + PSG ++A K H L + A + + + E++ L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRNQIIRELQVLHECNS 63
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
IV FYG I E+++ GSL +L + K V V+ L+Y+
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---VSIAVIKGLTYL 120
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
I+HRD+ N+L++ E + DFG + L +N GT Y++PE
Sbjct: 121 REKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERLQ 176
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
+ + D++S G+ +E+ G++P
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 127/281 (45%), Gaps = 29/281 (10%)
Query: 430 EIIRVTNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKF-HSPLPSEMASQQEFLNEVK 487
E IR DF D +G G V AE + ++VA+K L + S + NE+
Sbjct: 14 EDIRDIYDFRD--VLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSME---NEIA 68
Query: 488 TLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKR--MNVIK 545
L I+H NIV H +++ + + G L D + +T+R +I
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF-----DRIVEKGFYTERDASRLIF 123
Query: 546 GVVDALSYMHNDCFPPIVHRDISSKNVL---LDLENEAHVSDFGTAKFLKPDSSNWAELA 602
V+DA+ Y+H+ IVHRD+ +N+L LD +++ +SDFG +K P S +
Sbjct: 124 QVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP-GSVLSTAC 179
Query: 603 GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEML 662
GT GYVAPE+ ++ D +S GV+A ++ G +P + + A E
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG-YPPFYDENDAKLFEQILKAEYEFD 238
Query: 663 DPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703
P S + +D + +ME + PE R T ++ Q
Sbjct: 239 SPYWDDISDSAKDFIRHLME-------KDPEKRFTCEQALQ 272
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 10/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYK-AELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+DF+ +G G G V+K + PSG ++A K H L + A + + + E++ L
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRNQIIRELQVLHECNS 125
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
IV FYG I E+++ GSL +L + K V V+ L+Y+
Sbjct: 126 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---VSIAVIKGLTYL 182
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
I+HRD+ N+L++ E + DFG + L +N GT Y++PE
Sbjct: 183 REKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERLQ 238
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
+ + D++S G+ +E+ G++P
Sbjct: 239 GTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 117/263 (44%), Gaps = 30/263 (11%)
Query: 459 SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHA--RHSFIVYEY 516
+GE+VAVK + + S + E+ L + H +I+K+ G C + +V EY
Sbjct: 42 TGEMVAVKALKADCGPQHRSG--WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEY 99
Query: 517 LEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDL 576
+ +GSL L + +G + + + + + ++Y+H + +HR+++++NVLLD
Sbjct: 100 VPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHAQHY---IHRNLAARNVLLDN 152
Query: 577 ENEAHVSDFGTAKFLKPDSSNWAELA----GTYGYVAPELAYTMKVTEKCDVYSFGVLAL 632
+ + DFG AK + P+ + + + APE K DV+SFGV
Sbjct: 153 DRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLY 211
Query: 633 EVI-----KGKHPRDFXXXXXXXXXNLEI-ALNEMLD--PRLPTPSHNVQDKL-ISIMEV 683
E++ P F + + L E+L+ RLP P DK + +
Sbjct: 212 ELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRP-----DKCPCEVYHL 266
Query: 684 AISCLDESPESRPTIQKVSQLLK 706
+C + RPT + + +LK
Sbjct: 267 MKNCWETEASFRPTFENLIPILK 289
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 32/212 (15%)
Query: 445 GKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFC 504
+G G V+KA+L + VAVK F PL + + Q E E+ + G++H N+++F
Sbjct: 24 ARGRFGCVWKAQL-MNDFVAVKIF--PLQDKQSWQSE--REIFSTPGMKHENLLQF--IA 76
Query: 505 SHARHS------FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDC 558
+ R S +++ + + GSL L + + W + +V + + LSY+H D
Sbjct: 77 AEKRGSNLEVELWLITAFHDKGSLTDYLKGNI----ITWNELCHVAETMSRGLSYLHEDV 132
Query: 559 --------FPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDS--SNWAELAGTYGYV 608
P I HRD SKNVLL + A ++DFG A +P + GT Y+
Sbjct: 133 PWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYM 192
Query: 609 APE-----LAYTMKVTEKCDVYSFGVLALEVI 635
APE + + + D+Y+ G++ E++
Sbjct: 193 APEVLEGAINFQRDAFLRIDMYAMGLVLWELV 224
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 435 TNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR 493
D+D +G+G G V A + E VAVK + + + E+ +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEIXINKMLN 62
Query: 494 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTK--RMNVIKGVVDAL 551
H N+VKFYG H R I Y +LE S + D D+G + ++ +
Sbjct: 63 HENVVKFYG---HRREGNIQYLFLEYCSGGELF--DRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN--WAELAGTYGYVA 609
Y+H I HRDI +N+LLD + +SDFG A + ++ ++ GT YVA
Sbjct: 118 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 610 PELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 642
PEL + E DV+S G++ ++ G+ P D
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 121/272 (44%), Gaps = 25/272 (9%)
Query: 438 FDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRN 496
F+ + +G G V AE +G++ AVK P + + NE+ L I+H N
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCI--PKKALKGKESSIENEIAVLRKIKHEN 81
Query: 497 IVKFYGFCSHARHSFIVYEYLEMGSL--AMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
IV H ++V + + G L ++ KD +I+ V+DA+ Y+
Sbjct: 82 IVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAS-----TLIRQVLDAVYYL 136
Query: 555 HNDCFPPIVHRDISSKNVLL---DLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPE 611
H IVHRD+ +N+L D E++ +SDFG +K ++ + GT GYVAPE
Sbjct: 137 HR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSK-MEGKGDVMSTACGTPGYVAPE 192
Query: 612 LAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSH 671
+ ++ D +S GV+A ++ G +P + + A E P S
Sbjct: 193 VLAQKPYSKAVDCWSIGVIAYILLCG-YPPFYDENDSKLFEQILKAEYEFDSPYWDDISD 251
Query: 672 NVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703
+ +D + ++ME + P R T ++ ++
Sbjct: 252 SAKDFIRNLME-------KDPNKRYTCEQAAR 276
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 118/274 (43%), Gaps = 40/274 (14%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPS-----EMASQQEFLNEVKTLTGIRHRNIV 498
IG+G G VY L + KK H + S ++ +FL E + H N++
Sbjct: 57 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 499 KFYGFCSHARHS-FIVYEYLEMGSLAMILSNDA---AAKDL-GWTKRMNVIKGVVDALSY 553
G C + S +V Y++ G L + N+ KDL G+ + V KG + Y
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKG----MKY 167
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAK------FLKPDSSNWAELAGTYGY 607
+ + F VHRD++++N +LD + V+DFG A+ + + A+L +
Sbjct: 168 LASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP--VKW 222
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLP 667
+A E T K T K DV+SFGVL E++ P +I + + RL
Sbjct: 223 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP------PYPDVNTFDITVYLLQGRRLL 276
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKV 701
P + D L EV + C E RP+ ++
Sbjct: 277 QPEY-CPDPL---YEVMLKCWHPKAEMRPSFSEL 306
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 118/274 (43%), Gaps = 40/274 (14%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPS-----EMASQQEFLNEVKTLTGIRHRNIV 498
IG+G G VY L + KK H + S ++ +FL E + H N++
Sbjct: 56 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 499 KFYGFCSHARHS-FIVYEYLEMGSLAMILSNDA---AAKDL-GWTKRMNVIKGVVDALSY 553
G C + S +V Y++ G L + N+ KDL G+ + V KG + Y
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKG----MKY 166
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAK------FLKPDSSNWAELAGTYGY 607
+ + F VHRD++++N +LD + V+DFG A+ + + A+L +
Sbjct: 167 LASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP--VKW 221
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLP 667
+A E T K T K DV+SFGVL E++ P +I + + RL
Sbjct: 222 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP------PYPDVNTFDITVYLLQGRRLL 275
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKV 701
P + D L EV + C E RP+ ++
Sbjct: 276 QPEY-CPDPL---YEVMLKCWHPKAEMRPSFSEL 305
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 435 TNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR 493
D+D +G+G G V A + E VAVK + + + E+ +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEIXINKMLN 63
Query: 494 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTK--RMNVIKGVVDAL 551
H N+VKFYG H R I Y +LE S + D D+G + ++ +
Sbjct: 64 HENVVKFYG---HRREGNIQYLFLEYCSGGELF--DRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN--WAELAGTYGYVA 609
Y+H I HRDI +N+LLD + +SDFG A + ++ ++ GT YVA
Sbjct: 119 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 175
Query: 610 PELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 642
PEL + E DV+S G++ ++ G+ P D
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 435 TNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR 493
D+D +G+G G V A + E VAVK + + + E+ +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEIXINKMLN 62
Query: 494 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTK--RMNVIKGVVDAL 551
H N+VKFYG H R I Y +LE S + D D+G + ++ +
Sbjct: 63 HENVVKFYG---HRREGNIQYLFLEYCSGGELF--DRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN--WAELAGTYGYVA 609
Y+H I HRDI +N+LLD + +SDFG A + ++ ++ GT YVA
Sbjct: 118 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 610 PELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 642
PEL + E DV+S G++ ++ G+ P D
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 120/275 (43%), Gaps = 42/275 (15%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPS-----EMASQQEFLNEVKTLTGIRHRNIV 498
IG+G G VY L + KK H + S ++ +FL E + H N++
Sbjct: 30 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 499 KFYGFCSHARHS-FIVYEYLEMGSLAMILSNDA---AAKDL-GWTKRMNVIKGVVDALSY 553
G C + S +V Y++ G L + N+ KDL G+ + V KG + Y
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKG----MKY 140
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAK------FLKPDSSNWAELAGTYGY 607
+ + F VHRD++++N +LD + V+DFG A+ + + A+L +
Sbjct: 141 LASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP--VKW 195
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFXXXXXXXXXNLEIALNEMLDPRL 666
+A E T K T K DV+SFGVL E++ +G P +I + + RL
Sbjct: 196 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP-------YPDVNTFDITVYLLQGRRL 248
Query: 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKV 701
P + D L EV + C E RP+ ++
Sbjct: 249 LQPEY-CPDPL---YEVMLKCWHPKAEMRPSFSEL 279
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 435 TNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR 493
D+D +G+G G V A + E VAVK + + + E+ +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLN 63
Query: 494 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTK--RMNVIKGVVDAL 551
H N+VKFYG H R I Y +LE S + D D+G + ++ +
Sbjct: 64 HENVVKFYG---HRREGNIQYLFLEYCSGGELF--DRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN--WAELAGTYGYVA 609
Y+H I HRDI +N+LLD + +SDFG A + ++ ++ GT YVA
Sbjct: 119 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 610 PELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 642
PEL + E DV+S G++ ++ G+ P D
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 16/212 (7%)
Query: 437 DFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHR 495
D+D +G+G G V A + E VAVK + + + E+ + H
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 64
Query: 496 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTK--RMNVIKGVVDALSY 553
N+VKFYG H R I Y +LE S + D D+G + ++ + Y
Sbjct: 65 NVVKFYG---HRREGNIQYLFLEYCSGGELF--DRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN--WAELAGTYGYVAPE 611
+H I HRDI +N+LLD + +SDFG A + ++ ++ GT YVAPE
Sbjct: 120 LHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 612 LAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 642
L + E DV+S G++ ++ G+ P D
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 120/275 (43%), Gaps = 42/275 (15%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPS-----EMASQQEFLNEVKTLTGIRHRNIV 498
IG+G G VY L + KK H + S ++ +FL E + H N++
Sbjct: 38 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 499 KFYGFCSHARHS-FIVYEYLEMGSLAMILSNDA---AAKDL-GWTKRMNVIKGVVDALSY 553
G C + S +V Y++ G L + N+ KDL G+ + V KG + Y
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKG----MKY 148
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAK------FLKPDSSNWAELAGTYGY 607
+ + F VHRD++++N +LD + V+DFG A+ + + A+L +
Sbjct: 149 LASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP--VKW 203
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFXXXXXXXXXNLEIALNEMLDPRL 666
+A E T K T K DV+SFGVL E++ +G P +I + + RL
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP-------YPDVNTFDITVYLLQGRRL 256
Query: 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKV 701
P + D L EV + C E RP+ ++
Sbjct: 257 LQPEY-CPDPL---YEVMLKCWHPKAEMRPSFSEL 287
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 435 TNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR 493
D+D +G+G G V A + E VAVK + + + E+ +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLN 62
Query: 494 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTK--RMNVIKGVVDAL 551
H N+VKFYG H R I Y +LE S + D D+G + ++ +
Sbjct: 63 HENVVKFYG---HRREGNIQYLFLEYCSGGELF--DRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN--WAELAGTYGYVA 609
Y+H I HRDI +N+LLD + +SDFG A + ++ ++ GT YVA
Sbjct: 118 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 610 PELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 642
PEL + E DV+S G++ ++ G+ P D
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 435 TNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR 493
D+D +G+G G V A + E VAVK + + + E+ +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLN 62
Query: 494 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTK--RMNVIKGVVDAL 551
H N+VKFYG H R I Y +LE S + D D+G + ++ +
Sbjct: 63 HENVVKFYG---HRREGNIQYLFLEYCSGGELF--DRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN--WAELAGTYGYVA 609
Y+H I HRDI +N+LLD + +SDFG A + ++ ++ GT YVA
Sbjct: 118 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 610 PELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 642
PEL + E DV+S G++ ++ G+ P D
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 435 TNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR 493
D+D +G+G G V A + E VAVK + + + E+ +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINAMLN 63
Query: 494 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTK--RMNVIKGVVDAL 551
H N+VKFYG H R I Y +LE S + D D+G + ++ +
Sbjct: 64 HENVVKFYG---HRREGNIQYLFLEYCSGGELF--DRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN--WAELAGTYGYVA 609
Y+H I HRDI +N+LLD + +SDFG A + ++ ++ GT YVA
Sbjct: 119 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 610 PELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 642
PEL + E DV+S G++ ++ G+ P D
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 118/274 (43%), Gaps = 40/274 (14%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPS-----EMASQQEFLNEVKTLTGIRHRNIV 498
IG+G G VY L + KK H + S ++ +FL E + H N++
Sbjct: 36 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 499 KFYGFCSHARHS-FIVYEYLEMGSLAMILSNDA---AAKDL-GWTKRMNVIKGVVDALSY 553
G C + S +V Y++ G L + N+ KDL G+ + V KG + Y
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKG----MKY 146
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAK------FLKPDSSNWAELAGTYGY 607
+ + F VHRD++++N +LD + V+DFG A+ + + A+L +
Sbjct: 147 LASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP--VKW 201
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLP 667
+A E T K T K DV+SFGVL E++ P +I + + RL
Sbjct: 202 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP------PYPDVNTFDITVYLLQGRRLL 255
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKV 701
P + D L EV + C E RP+ ++
Sbjct: 256 QPEY-CPDPL---YEVMLKCWHPKAEMRPSFSEL 285
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 120/275 (43%), Gaps = 42/275 (15%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPS-----EMASQQEFLNEVKTLTGIRHRNIV 498
IG+G G VY L + KK H + S ++ +FL E + H N++
Sbjct: 35 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 499 KFYGFCSHARHS-FIVYEYLEMGSLAMILSNDA---AAKDL-GWTKRMNVIKGVVDALSY 553
G C + S +V Y++ G L + N+ KDL G+ + V KG + Y
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKG----MKY 145
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAK------FLKPDSSNWAELAGTYGY 607
+ + F VHRD++++N +LD + V+DFG A+ + + A+L +
Sbjct: 146 LASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP--VKW 200
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFXXXXXXXXXNLEIALNEMLDPRL 666
+A E T K T K DV+SFGVL E++ +G P +I + + RL
Sbjct: 201 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP-------YPDVNTFDITVYLLQGRRL 253
Query: 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKV 701
P + D L EV + C E RP+ ++
Sbjct: 254 LQPEY-CPDPL---YEVMLKCWHPKAEMRPSFSEL 284
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 435 TNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR 493
D+D +G+G G V A + E VAVK + + + E+ +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLN 63
Query: 494 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTK--RMNVIKGVVDAL 551
H N+VKFYG H R I Y +LE S + D D+G + ++ +
Sbjct: 64 HENVVKFYG---HRREGNIQYLFLEYCSGGELF--DRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN--WAELAGTYGYVA 609
Y+H I HRDI +N+LLD + +SDFG A + ++ ++ GT YVA
Sbjct: 119 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 610 PELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 642
PEL + E DV+S G++ ++ G+ P D
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 435 TNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR 493
D+D +G+G G V A + E VAVK + + + E+ +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLN 63
Query: 494 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTK--RMNVIKGVVDAL 551
H N+VKFYG H R I Y +LE S + D D+G + ++ +
Sbjct: 64 HENVVKFYG---HRREGNIQYLFLEYCSGGELF--DRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN--WAELAGTYGYVA 609
Y+H I HRDI +N+LLD + +SDFG A + ++ ++ GT YVA
Sbjct: 119 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 610 PELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 642
PEL + E DV+S G++ ++ G+ P D
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 92/207 (44%), Gaps = 25/207 (12%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G G G V + K +S + L EV L + H NI+K Y F
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104
Query: 504 CSHARHSFIVYEYLEMGSL------AMILSN-DAAAKDLGWTKRMNVIKGVVDALSYMHN 556
R+ ++V E + G L M + DAA +IK V+ ++Y+H
Sbjct: 105 FEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV----------IIKQVLSGVTYLHK 154
Query: 557 DCFPPIVHRDISSKNVLLD-LENEA--HVSDFGTAKFLKPDSSNWAELAGTYGYVAPELA 613
IVHRD+ +N+LL+ E +A + DFG + + + E GT Y+APE+
Sbjct: 155 ---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE-NQKKMKERLGTAYYIAPEV- 209
Query: 614 YTMKVTEKCDVYSFGVLALEVIKGKHP 640
K EKCDV+S GV+ ++ G P
Sbjct: 210 LRKKYDEKCDVWSIGVILFILLAGYPP 236
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 16/212 (7%)
Query: 437 DFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHR 495
D+D +G+G G V A + E VAVK + + + E+ + H
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 65
Query: 496 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTK--RMNVIKGVVDALSY 553
N+VKFYG H R I Y +LE S + D D+G + ++ + Y
Sbjct: 66 NVVKFYG---HRREGNIQYLFLEYCSGGELF--DRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN--WAELAGTYGYVAPE 611
+H I HRDI +N+LLD + +SDFG A + ++ ++ GT YVAPE
Sbjct: 121 LHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 612 LAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 642
L + E DV+S G++ ++ G+ P D
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 435 TNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR 493
D+D +G+G G V A + E VAVK + + + E+ +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLN 63
Query: 494 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTK--RMNVIKGVVDAL 551
H N+VKFYG H R I Y +LE S + D D+G + ++ +
Sbjct: 64 HENVVKFYG---HRREGNIQYLFLEYCSGGELF--DRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN--WAELAGTYGYVA 609
Y+H I HRDI +N+LLD + +SDFG A + ++ ++ GT YVA
Sbjct: 119 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 610 PELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 642
PEL + E DV+S G++ ++ G+ P D
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 435 TNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR 493
D+D +G+G G V A + E VAVK + + + E+ +
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLN 62
Query: 494 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTK--RMNVIKGVVDAL 551
H N+VKFYG H R I Y +LE S + D D+G + ++ +
Sbjct: 63 HENVVKFYG---HRREGNIQYLFLEYCSGGELF--DRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN--WAELAGTYGYVA 609
Y+H I HRDI +N+LLD + +SDFG A + ++ ++ GT YVA
Sbjct: 118 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 610 PELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 642
PEL + E DV+S G++ ++ G+ P D
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 118/274 (43%), Gaps = 40/274 (14%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPS-----EMASQQEFLNEVKTLTGIRHRNIV 498
IG+G G VY L + KK H + S ++ +FL E + H N++
Sbjct: 37 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 499 KFYGFCSHARHS-FIVYEYLEMGSLAMILSNDA---AAKDL-GWTKRMNVIKGVVDALSY 553
G C + S +V Y++ G L + N+ KDL G+ + V KG + Y
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKG----MKY 147
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAK------FLKPDSSNWAELAGTYGY 607
+ + F VHRD++++N +LD + V+DFG A+ + + A+L +
Sbjct: 148 LASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP--VKW 202
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLP 667
+A E T K T K DV+SFGVL E++ P +I + + RL
Sbjct: 203 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP------PYPDVNTFDITVYLLQGRRLL 256
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKV 701
P + D L EV + C E RP+ ++
Sbjct: 257 QPEY-CPDPL---YEVMLKCWHPKAEMRPSFSEL 286
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 435 TNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR 493
D+D +G+G G V A + E VAVK + + + E+ +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLN 63
Query: 494 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTK--RMNVIKGVVDAL 551
H N+VKFYG H R I Y +LE S + D D+G + ++ +
Sbjct: 64 HENVVKFYG---HRREGNIQYLFLEYCSGGELF--DRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN--WAELAGTYGYVA 609
Y+H I HRDI +N+LLD + +SDFG A + ++ ++ GT YVA
Sbjct: 119 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 610 PELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 642
PEL + E DV+S G++ ++ G+ P D
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 118/274 (43%), Gaps = 40/274 (14%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPS-----EMASQQEFLNEVKTLTGIRHRNIV 498
IG+G G VY L + KK H + S ++ +FL E + H N++
Sbjct: 33 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 499 KFYGFCSHARHS-FIVYEYLEMGSLAMILSNDA---AAKDL-GWTKRMNVIKGVVDALSY 553
G C + S +V Y++ G L + N+ KDL G+ + V KG + Y
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKG----MKY 143
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAK------FLKPDSSNWAELAGTYGY 607
+ + F VHRD++++N +LD + V+DFG A+ + + A+L +
Sbjct: 144 LASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP--VKW 198
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLP 667
+A E T K T K DV+SFGVL E++ P +I + + RL
Sbjct: 199 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP------PYPDVNTFDITVYLLQGRRLL 252
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKV 701
P + D L EV + C E RP+ ++
Sbjct: 253 QPEY-CPDPL---YEVMLKCWHPKAEMRPSFSEL 282
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 435 TNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR 493
D+D +G+G G V A + E VAVK + + + E+ +
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLN 61
Query: 494 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTK--RMNVIKGVVDAL 551
H N+VKFYG H R I Y +LE S + D D+G + ++ +
Sbjct: 62 HENVVKFYG---HRREGNIQYLFLEYCSGGELF--DRIEPDIGMPEPDAQRFFHQLMAGV 116
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN--WAELAGTYGYVA 609
Y+H I HRDI +N+LLD + +SDFG A + ++ ++ GT YVA
Sbjct: 117 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 173
Query: 610 PELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 642
PEL + E DV+S G++ ++ G+ P D
Sbjct: 174 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 26/213 (12%)
Query: 440 DEHCIGKGGQGSVYKAELPSGEI-VAVK-------KFHSPLPSEMASQQEFLNEVKTLTG 491
D +GKG G VY S ++ +A+K ++ PL E+A +
Sbjct: 12 DRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKH---------- 61
Query: 492 IRHRNIVKFYGFCSHARHSFIVYEYLEMGSL-AMILSNDAAAKDLGWTKRMNVIKGVVDA 550
++H+NIV++ G S I E + GSL A++ S KD T K +++
Sbjct: 62 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGF-YTKQILEG 120
Query: 551 LSYMHNDCFPPIVHRDISSKNVLLDLENEA-HVSDFGTAKFLKPDSSNWAELAGTYGYVA 609
L Y+H++ IVHRDI NVL++ + +SDFGT+K L + GT Y+A
Sbjct: 121 LKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMA 177
Query: 610 PEL--AYTMKVTEKCDVYSFGVLALEVIKGKHP 640
PE+ + D++S G +E+ GK P
Sbjct: 178 PEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 435 TNDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR 493
++ + + +GKG G V + +G+ AVK + ++ L EV+ L +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 494 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSY 553
H NI K Y F + ++V E G L + K +I+ V+ ++Y
Sbjct: 85 HPNIXKLYEFFEDKGYFYLVGEVYTGGEL---FDEIISRKRFSEVDAARIIRQVLSGITY 141
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEA---HVSDFGTAKFLKPDSSNWAELAGTYGYVAP 610
H + IVHRD+ +N+LL+ +++ + DFG + + S + GT Y+AP
Sbjct: 142 XHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKXKDKIGTAYYIAP 197
Query: 611 ELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
E+ + EKCDV+S GV+ ++ G P
Sbjct: 198 EVLHGT-YDEKCDVWSTGVILYILLSGCPP 226
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 120/275 (43%), Gaps = 42/275 (15%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPS-----EMASQQEFLNEVKTLTGIRHRNIV 498
IG+G G VY L + KK H + S ++ +FL E + H N++
Sbjct: 38 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 499 KFYGFCSHARHS-FIVYEYLEMGSLAMILSNDA---AAKDL-GWTKRMNVIKGVVDALSY 553
G C + S +V Y++ G L + N+ KDL G+ + V KG + Y
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKG----MKY 148
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAK------FLKPDSSNWAELAGTYGY 607
+ + F VHRD++++N +LD + V+DFG A+ + + A+L +
Sbjct: 149 LASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP--VKW 203
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFXXXXXXXXXNLEIALNEMLDPRL 666
+A E T K T K DV+SFGVL E++ +G P +I + + RL
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP-------YPDVNTFDITVYLLQGRRL 256
Query: 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKV 701
P + D L EV + C E RP+ ++
Sbjct: 257 LQPEY-CPDPL---YEVMLKCWHPKAEMRPSFSEL 287
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 435 TNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR 493
D+D +G+G G V A + E VAVK + + + E+ +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLN 62
Query: 494 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTK--RMNVIKGVVDAL 551
H N+VKFYG H R I Y +LE S + D D+G + ++ +
Sbjct: 63 HENVVKFYG---HRREGNIQYLFLEYCSGGELF--DRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN--WAELAGTYGYVA 609
Y+H I HRDI +N+LLD + +SDFG A + ++ ++ GT YVA
Sbjct: 118 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 610 PELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 642
PEL + E DV+S G++ ++ G+ P D
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 435 TNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR 493
D+D +G+G G V A + E VAVK + + + E+ +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLN 62
Query: 494 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTK--RMNVIKGVVDAL 551
H N+VKFYG H R I Y +LE S + D D+G + ++ +
Sbjct: 63 HENVVKFYG---HRREGNIQYLFLEYCSGGELF--DRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN--WAELAGTYGYVA 609
Y+H I HRDI +N+LLD + +SDFG A + ++ ++ GT YVA
Sbjct: 118 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 610 PELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 642
PEL + E DV+S G++ ++ G+ P D
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 435 TNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR 493
D+D +G+G G V A + E VAVK + + + E+ +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLN 62
Query: 494 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTK--RMNVIKGVVDAL 551
H N+VKFYG H R I Y +LE S + D D+G + ++ +
Sbjct: 63 HENVVKFYG---HRREGNIQYLFLEYCSGGELF--DRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN--WAELAGTYGYVA 609
Y+H I HRDI +N+LLD + +SDFG A + ++ ++ GT YVA
Sbjct: 118 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 610 PELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 642
PEL + E DV+S G++ ++ G+ P D
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 435 TNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR 493
D+D +G+G G V A + E VAVK + + + E+ +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLN 62
Query: 494 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTK--RMNVIKGVVDAL 551
H N+VKFYG H R I Y +LE S + D D+G + ++ +
Sbjct: 63 HENVVKFYG---HRREGNIQYLFLEYCSGGELF--DRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN--WAELAGTYGYVA 609
Y+H I HRDI +N+LLD + +SDFG A + ++ ++ GT YVA
Sbjct: 118 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 610 PELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 642
PEL + E DV+S G++ ++ G+ P D
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 115/272 (42%), Gaps = 36/272 (13%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPS-----EMASQQEFLNEVKTLTGIRHRNIV 498
IG+G G VY L + KK H + S ++ +FL E + H N++
Sbjct: 37 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 499 KFYGFCSHARHS-FIVYEYLEMGSLAMILSNDA---AAKDL-GWTKRMNVIKGVVDALSY 553
G C + S +V Y++ G L + N+ KDL G+ + V KG + Y
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKG----MKY 147
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSS----NWAELAGTYGYVA 609
+ + F VHRD++++N +LD + V+DFG A+ + N ++A
Sbjct: 148 LASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA 204
Query: 610 PELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTP 669
E T K T K DV+SFGVL E++ P +I + + RL P
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP------PYPDVNTFDITVYLLQGRRLLQP 258
Query: 670 SHNVQDKLISIMEVAISCLDESPESRPTIQKV 701
+ D L EV + C E RP+ ++
Sbjct: 259 EY-CPDPL---YEVMLKCWHPKAEMRPSFSEL 286
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 26/213 (12%)
Query: 440 DEHCIGKGGQGSVYKAELPSGEI-VAVK-------KFHSPLPSEMASQQEFLNEVKTLTG 491
D +GKG G VY S ++ +A+K ++ PL E+A +
Sbjct: 26 DRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKH---------- 75
Query: 492 IRHRNIVKFYGFCSHARHSFIVYEYLEMGSL-AMILSNDAAAKDLGWTKRMNVIKGVVDA 550
++H+NIV++ G S I E + GSL A++ S KD T K +++
Sbjct: 76 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGF-YTKQILEG 134
Query: 551 LSYMHNDCFPPIVHRDISSKNVLLDLENEA-HVSDFGTAKFLKPDSSNWAELAGTYGYVA 609
L Y+H++ IVHRDI NVL++ + +SDFGT+K L + GT Y+A
Sbjct: 135 LKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMA 191
Query: 610 PEL--AYTMKVTEKCDVYSFGVLALEVIKGKHP 640
PE+ + D++S G +E+ GK P
Sbjct: 192 PEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 435 TNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR 493
D+D +G+G G V A + E VAVK + + + E+ +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLN 62
Query: 494 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTK--RMNVIKGVVDAL 551
H N+VKFYG H R I Y +LE S + D D+G + ++ +
Sbjct: 63 HENVVKFYG---HRREGNIQYLFLEYCSGGELF--DRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN--WAELAGTYGYVA 609
Y+H I HRDI +N+LLD + +SDFG A + ++ ++ GT YVA
Sbjct: 118 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 610 PELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 642
PEL + E DV+S G++ ++ G+ P D
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 109/222 (49%), Gaps = 22/222 (9%)
Query: 428 YEEIIRVTNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKF-HSPLPSEMASQQEFLNE 485
Y+E+++ ++ IG GG V A + +GE+VA+K + L S++ + E
Sbjct: 5 YDELLKY---YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIK---TE 58
Query: 486 VKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSL-AMILSNDAAAKDLGWTKRMNVI 544
++ L +RH++I + Y A F+V EY G L I+S D +++ + V
Sbjct: 59 IEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEE----ETRVVF 114
Query: 545 KGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAEL--- 601
+ +V A++Y+H+ + HRD+ +N+L D ++ + DFG KP + L
Sbjct: 115 RQIVSAVAYVHSQGY---AHRDLKPENLLFDEYHKLKLIDFGLCA--KPKGNKDYHLQTC 169
Query: 602 AGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRD 642
G+ Y APEL + + DV+S G+L ++ G P D
Sbjct: 170 CGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFD 211
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 435 TNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR 493
D+D +G+G G V A + E VAVK + + + E+ +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLN 62
Query: 494 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTK--RMNVIKGVVDAL 551
H N+VKFYG H R I Y +LE S + D D+G + ++ +
Sbjct: 63 HENVVKFYG---HRREGNIQYLFLEYCSGGELF--DRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN--WAELAGTYGYVA 609
Y+H I HRDI +N+LLD + +SDFG A + ++ ++ GT YVA
Sbjct: 118 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 610 PELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 642
PEL + E DV+S G++ ++ G+ P D
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 32/215 (14%)
Query: 443 CIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
C+GKG G V++ L GE VAVK F S + E N V +RH NI+ F
Sbjct: 15 CVGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRETEIYNTVL----LRHDNILGFIA 69
Query: 503 FCSHARHS----FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDC 558
+R+S +++ Y E GSL L L + + L+++H +
Sbjct: 70 SDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLA----LRLAVSAACGLAHLHVEI 125
Query: 559 F-----PPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELA-----GTYGYV 608
F P I HRD S+NVL+ + ++D G A + S++ ++ GT Y+
Sbjct: 126 FGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA-VMHSQGSDYLDIGNNPRVGTKRYM 184
Query: 609 APELAYTMKVTEKC-------DVYSFGVLALEVIK 636
APE+ ++ C D+++FG++ E+ +
Sbjct: 185 APEV-LDEQIRTDCFESYKWTDIWAFGLVLWEIAR 218
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 438 FDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLN-EVKTLTGIRHR 495
+ D IG G G VY+A+L SGE+VA+KK + + F N E++ + + H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 73
Query: 496 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVD 549
NIV+ Y F S +VY +Y+ + A + L + +
Sbjct: 74 NIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEA-HVSDFGTAKFLKPDSSNWAELAGTYGYV 608
+L+Y+H+ I HRDI +N+LLD + + DFG+AK L N + + Y Y
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 189
Query: 609 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 638
APEL + T DV+S G + E++ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 16/207 (7%)
Query: 438 FDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRN 496
+ D +G G G+V A + +G VA+KK + P SE+ +++ + E++ L +RH N
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAY-RELRLLKHMRHEN 85
Query: 497 IVKFYG-FCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMH 555
++ F YL M + L + LG + ++ ++ L Y+H
Sbjct: 86 VIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIH 145
Query: 556 NDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG---TYGYVAPEL 612
I+HRD+ N+ ++ + E + DFG A+ + DS E+ G T Y APE+
Sbjct: 146 A---AGIIHRDLKPGNLAVNEDCELKILDFGLAR--QADS----EMXGXVVTRWYRAPEV 196
Query: 613 AYT-MKVTEKCDVYSFGVLALEVIKGK 638
M+ T+ D++S G + E+I GK
Sbjct: 197 ILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 118/274 (43%), Gaps = 40/274 (14%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPS-----EMASQQEFLNEVKTLTGIRHRNIV 498
IG+G G VY L + KK H + S ++ +FL E + H N++
Sbjct: 39 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 499 KFYGFCSHARHS-FIVYEYLEMGSLAMILSNDA---AAKDL-GWTKRMNVIKGVVDALSY 553
G C + S +V Y++ G L + N+ KDL G+ + V KG + +
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKG----MKF 149
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAK------FLKPDSSNWAELAGTYGY 607
+ + F VHRD++++N +LD + V+DFG A+ F + A+L +
Sbjct: 150 LASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLP--VKW 204
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLP 667
+A E T K T K DV+SFGVL E++ P +I + + RL
Sbjct: 205 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP------PYPDVNTFDITVYLLQGRRLL 258
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKV 701
P + D L EV + C E RP+ ++
Sbjct: 259 QPEY-CPDPL---YEVMLKCWHPKAEMRPSFSEL 288
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 9/200 (4%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G G+ V K EL +G VAVK + + + E++ L RH +I+K Y
Sbjct: 26 VGTFGKVKVGKHEL-TGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQV 84
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
S F+V EY+ G L + + L + + + ++ + Y H +V
Sbjct: 85 ISTPSDIFMVMEYVSGGELFDYICKNGR---LDEKESRRLFQQILSGVDYCHRHM---VV 138
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPE-LAYTMKVTEKC 622
HRD+ +NVLLD A ++DFG + + D G+ Y APE ++ + +
Sbjct: 139 HRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRXSCGSPNYAAPEVISGRLYAGPEV 197
Query: 623 DVYSFGVLALEVIKGKHPRD 642
D++S GV+ ++ G P D
Sbjct: 198 DIWSSGVILYALLCGTLPFD 217
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 95/215 (44%), Gaps = 20/215 (9%)
Query: 435 TNDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSP-----LPSEMASQQEFLNEVKT 488
T+ ++ IG G G+VYKA P SG VA+K P LP + L +
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALL---RR 59
Query: 489 LTGIRHRNIVKFYGFCSHARHS-----FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNV 543
L H N+V+ C+ +R +V+E+++ + + A L ++
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYL--DKAPPPGLPAETIKDL 117
Query: 544 IKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG 603
++ + L ++H +C IVHRD+ +N+L+ ++DFG A+ + A +
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LAPVVV 173
Query: 604 TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGK 638
T Y APE+ D++S G + E+ + K
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 118/274 (43%), Gaps = 40/274 (14%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPS-----EMASQQEFLNEVKTLTGIRHRNIV 498
IG+G G VY L + KK H + S ++ +FL E + H N++
Sbjct: 97 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 499 KFYGFCSHARHS-FIVYEYLEMGSLAMILSNDA---AAKDL-GWTKRMNVIKGVVDALSY 553
G C + S +V Y++ G L + N+ KDL G+ + V KG + +
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKG----MKF 207
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAK------FLKPDSSNWAELAGTYGY 607
+ + F VHRD++++N +LD + V+DFG A+ F + A+L +
Sbjct: 208 LASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP--VKW 262
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLP 667
+A E T K T K DV+SFGVL E++ P +I + + RL
Sbjct: 263 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP------PYPDVNTFDITVYLLQGRRLL 316
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKV 701
P + D L EV + C E RP+ ++
Sbjct: 317 QPEY-CPDPL---YEVMLKCWHPKAEMRPSFSEL 346
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 118/274 (43%), Gaps = 40/274 (14%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPS-----EMASQQEFLNEVKTLTGIRHRNIV 498
IG+G G VY L + KK H + S ++ +FL E + H N++
Sbjct: 43 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 499 KFYGFCSHARHS-FIVYEYLEMGSLAMILSNDA---AAKDL-GWTKRMNVIKGVVDALSY 553
G C + S +V Y++ G L + N+ KDL G+ + V KG + +
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKG----MKF 153
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAK------FLKPDSSNWAELAGTYGY 607
+ + F VHRD++++N +LD + V+DFG A+ F + A+L +
Sbjct: 154 LASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP--VKW 208
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLP 667
+A E T K T K DV+SFGVL E++ P +I + + RL
Sbjct: 209 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP------PYPDVNTFDITVYLLQGRRLL 262
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKV 701
P + D L EV + C E RP+ ++
Sbjct: 263 QPEY-CPDPL---YEVMLKCWHPKAEMRPSFSEL 292
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 118/274 (43%), Gaps = 40/274 (14%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPS-----EMASQQEFLNEVKTLTGIRHRNIV 498
IG+G G VY L + KK H + S ++ +FL E + H N++
Sbjct: 36 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 499 KFYGFCSHARHS-FIVYEYLEMGSLAMILSNDA---AAKDL-GWTKRMNVIKGVVDALSY 553
G C + S +V Y++ G L + N+ KDL G+ + V KG + +
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKG----MKF 146
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAK------FLKPDSSNWAELAGTYGY 607
+ + F VHRD++++N +LD + V+DFG A+ F + A+L +
Sbjct: 147 LASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP--VKW 201
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLP 667
+A E T K T K DV+SFGVL E++ P +I + + RL
Sbjct: 202 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP------PYPDVNTFDITVYLLQGRRLL 255
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKV 701
P + D L EV + C E RP+ ++
Sbjct: 256 QPEY-CPDPL---YEVMLKCWHPKAEMRPSFSEL 285
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 10/197 (5%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G+G G VYKA+ G IVA+K+ E + E+ L + H NIV
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTA-IREISLLKELHHPNIVSLIDV 87
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRM-NVIKGVVDALSYMHNDCFPPI 562
R +V+E++E ++ N +D + +++GV A + H I
Sbjct: 88 IHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGV--AHCHQHR-----I 140
Query: 563 VHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPE-LAYTMKVTEK 621
+HRD+ +N+L++ + ++DFG A+ ++ T Y AP+ L + K +
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTS 200
Query: 622 CDVYSFGVLALEVIKGK 638
D++S G + E+I GK
Sbjct: 201 VDIWSIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 10/197 (5%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G+G G VYKA+ G IVA+K+ E + E+ L + H NIV
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTA-IREISLLKELHHPNIVSLIDV 87
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRM-NVIKGVVDALSYMHNDCFPPI 562
R +V+E++E ++ N +D + +++GV A + H I
Sbjct: 88 IHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGV--AHCHQHR-----I 140
Query: 563 VHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPE-LAYTMKVTEK 621
+HRD+ +N+L++ + ++DFG A+ ++ T Y AP+ L + K +
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTS 200
Query: 622 CDVYSFGVLALEVIKGK 638
D++S G + E+I GK
Sbjct: 201 VDIWSIGCIFAEMITGK 217
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 118/274 (43%), Gaps = 40/274 (14%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPS-----EMASQQEFLNEVKTLTGIRHRNIV 498
IG+G G VY L + KK H + S ++ +FL E + H N++
Sbjct: 38 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 499 KFYGFCSHARHS-FIVYEYLEMGSLAMILSNDA---AAKDL-GWTKRMNVIKGVVDALSY 553
G C + S +V Y++ G L + N+ KDL G+ + V KG + +
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKG----MKF 148
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAK------FLKPDSSNWAELAGTYGY 607
+ + F VHRD++++N +LD + V+DFG A+ F + A+L +
Sbjct: 149 LASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP--VKW 203
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLP 667
+A E T K T K DV+SFGVL E++ P +I + + RL
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP------PYPDVNTFDITVYLLQGRRLL 257
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKV 701
P + D L EV + C E RP+ ++
Sbjct: 258 QPEY-CPDPL---YEVMLKCWHPKAEMRPSFSEL 287
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 118/274 (43%), Gaps = 40/274 (14%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPS-----EMASQQEFLNEVKTLTGIRHRNIV 498
IG+G G VY L + KK H + S ++ +FL E + H N++
Sbjct: 38 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 499 KFYGFCSHARHS-FIVYEYLEMGSLAMILSNDA---AAKDL-GWTKRMNVIKGVVDALSY 553
G C + S +V Y++ G L + N+ KDL G+ + V KG + +
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKG----MKF 148
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAK------FLKPDSSNWAELAGTYGY 607
+ + F VHRD++++N +LD + V+DFG A+ F + A+L +
Sbjct: 149 LASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP--VKW 203
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLP 667
+A E T K T K DV+SFGVL E++ P +I + + RL
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP------PYPDVNTFDITVYLLQGRRLL 257
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKV 701
P + D L EV + C E RP+ ++
Sbjct: 258 QPEY-CPDPL---YEVMLKCWHPKAEMRPSFSEL 287
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 118/274 (43%), Gaps = 40/274 (14%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPS-----EMASQQEFLNEVKTLTGIRHRNIV 498
IG+G G VY L + KK H + S ++ +FL E + H N++
Sbjct: 39 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 499 KFYGFCSHARHS-FIVYEYLEMGSLAMILSNDA---AAKDL-GWTKRMNVIKGVVDALSY 553
G C + S +V Y++ G L + N+ KDL G+ + V KG + +
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKG----MKF 149
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAK------FLKPDSSNWAELAGTYGY 607
+ + F VHRD++++N +LD + V+DFG A+ F + A+L +
Sbjct: 150 LASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP--VKW 204
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLP 667
+A E T K T K DV+SFGVL E++ P +I + + RL
Sbjct: 205 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP------PYPDVNTFDITVYLLQGRRLL 258
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKV 701
P + D L EV + C E RP+ ++
Sbjct: 259 QPEY-CPDPL---YEVMLKCWHPKAEMRPSFSEL 288
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 112/259 (43%), Gaps = 19/259 (7%)
Query: 444 IGKGGQGSVYK-AELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+GKGG Y+ ++ + E+ A K + + +++ E+ + + ++V F+G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 503 FCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPI 562
F ++V E SL + A + + ++ + + Y+HN+ +
Sbjct: 94 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTE---PEARYFMRQTIQGVQYLHNN---RV 147
Query: 563 VHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKC 622
+HRD+ N+ L+ + + + DFG A ++ D +L GT Y+APE+ + +
Sbjct: 148 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEV 207
Query: 623 DVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISIME 682
D++S G + ++ GK P + + I NE PR P V LI M
Sbjct: 208 DIWSLGCILYTLLVGKPPFE---TSCLKETYIRIKKNEYSVPRHINP---VASALIRRM- 260
Query: 683 VAISCLDESPESRPTIQKV 701
L P RP++ ++
Sbjct: 261 -----LHADPTLRPSVAEL 274
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 9/200 (4%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G G+ + + +L +G VAVK + + + E++ L RH +I+K Y
Sbjct: 21 VGTFGKVKIGEHQL-TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQV 79
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
S F+V EY+ G L + +++ + + + ++ A+ Y H +V
Sbjct: 80 ISTPTDFFMVMEYVSGGELFDYICKHGRVEEM---EARRLFQQILSAVDYCHRHM---VV 133
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPE-LAYTMKVTEKC 622
HRD+ +NVLLD A ++DFG + + D + G+ Y APE ++ + +
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRDSCGSPNYAAPEVISGRLYAGPEV 192
Query: 623 DVYSFGVLALEVIKGKHPRD 642
D++S GV+ ++ G P D
Sbjct: 193 DIWSCGVILYALLCGTLPFD 212
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 94/204 (46%), Gaps = 18/204 (8%)
Query: 444 IGKGGQGSVY--KAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFY 501
+G G G V K +L E A+K + ++ L+EV L + H NI+K Y
Sbjct: 29 LGSGAYGEVLLCKDKLTGAE-RAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 87
Query: 502 GFCSHARHSFIVYEYLEMGSL--AMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCF 559
F R+ ++V E G L +IL + D ++K V+ +Y+H
Sbjct: 88 EFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAA-----VIMKQVLSGTTYLHKH-- 140
Query: 560 PPIVHRDISSKNVLLDLENE---AHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTM 616
IVHRD+ +N+LL+ ++ + DFG + + E GT Y+APE+
Sbjct: 141 -NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV-GGKMKERLGTAYYIAPEVL-RK 197
Query: 617 KVTEKCDVYSFGVLALEVIKGKHP 640
K EKCDV+S GV+ ++ G P
Sbjct: 198 KYDEKCDVWSCGVILYILLCGYPP 221
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 118/278 (42%), Gaps = 38/278 (13%)
Query: 444 IGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G G VYK + +G++ A+K E +QE +N +K + HRNI +YG
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQE-INMLKKYS--HHRNIATYYG 88
Query: 503 FCSHAR------HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHN 556
++V E+ GS+ ++ N L + + ++ LS++H
Sbjct: 89 AFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKN-TKGNTLKEEWIAYICREILRGLSHLHQ 147
Query: 557 DCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTM 616
++HRDI +NVLL E + DFG + L GT ++APE+
Sbjct: 148 H---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACD 204
Query: 617 KVTE-----KCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTP-- 669
+ + K D++S G+ A+E+ +G P ++ L PR P P
Sbjct: 205 ENPDATYDFKSDLWSLGITAIEMAEGAPP----------LCDMHPMRALFLIPRNPAPRL 254
Query: 670 -SHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
S K S +E SCL ++ RP + QL+K
Sbjct: 255 KSKKWSKKFQSFIE---SCLVKNHSQRPATE---QLMK 286
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 103/228 (45%), Gaps = 30/228 (13%)
Query: 433 RVTNDFDDEHCIGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTG 491
R DF+ C+G+GG G V++A+ + A+K+ LP+ ++++ + EVK L
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIR--LPNRELAREKVMREVKALAK 59
Query: 492 IRHRNIVKFYGFCSHAR-------HSFIVYEYLEMG-----SLAMILSNDAAAKDLGWTK 539
+ H IV+++ S VY Y++M +L ++ ++ +
Sbjct: 60 LEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSV 119
Query: 540 RMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWA 599
+++ + +A+ ++H+ ++HRD+ N+ +++ V DFG + D
Sbjct: 120 CLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 176
Query: 600 ELA------------GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVI 635
L GT Y++PE + + K D++S G++ E++
Sbjct: 177 VLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 94/204 (46%), Gaps = 18/204 (8%)
Query: 444 IGKGGQGSVY--KAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFY 501
+G G G V K +L E A+K + ++ L+EV L + H NI+K Y
Sbjct: 12 LGSGAYGEVLLCKDKLTGAE-RAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 70
Query: 502 GFCSHARHSFIVYEYLEMGSL--AMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCF 559
F R+ ++V E G L +IL + D ++K V+ +Y+H
Sbjct: 71 EFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAA-----VIMKQVLSGTTYLHK--- 122
Query: 560 PPIVHRDISSKNVLLDLENEA---HVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTM 616
IVHRD+ +N+LL+ ++ + DFG + + E GT Y+APE+
Sbjct: 123 HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV-GGKMKERLGTAYYIAPEV-LRK 180
Query: 617 KVTEKCDVYSFGVLALEVIKGKHP 640
K EKCDV+S GV+ ++ G P
Sbjct: 181 KYDEKCDVWSCGVILYILLCGYPP 204
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 18/206 (8%)
Query: 443 CIGKGGQGSVYKAE-LPSGEIVAVKKF-HSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
IGKG V A + +G+ VAVK + L S +S Q+ EV+ + + H NIVK
Sbjct: 14 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNS--SSLQKLFREVRIMKVLNHPNIVKL 71
Query: 501 YGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNV---IKGVVDALSYMHND 557
+ + ++V EY G + L GW K + +V A+ Y H
Sbjct: 72 FEVIETEKTLYLVMEYASGGEVFDYLVAH------GWMKEKEARAKFRQIVSAVQYCHQK 125
Query: 558 CFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMK 617
IVHRD+ ++N+LLD + ++DFG + + G+ Y APEL K
Sbjct: 126 F---IVHRDLKAENLLLDADMNIKIADFGFSNEFTF-GNKLDTFCGSPPYAAPELFQGKK 181
Query: 618 VT-EKCDVYSFGVLALEVIKGKHPRD 642
+ DV+S GV+ ++ G P D
Sbjct: 182 YDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 94/203 (46%), Gaps = 12/203 (5%)
Query: 443 CIGKGGQGSVYKAE-LPSGEIVAVKKF-HSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
IGKG V A + +G+ VAV+ + L S +S Q+ EV+ + + H NIVK
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNS--SSLQKLFREVRIMKVLNHPNIVKL 78
Query: 501 YGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ + ++V EY G + L K+ + + +V A+ Y H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK---FRQIVSAVQYCHQKF-- 133
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVT- 619
IVHRD+ ++N+LLD + ++DFG + + E G+ Y APEL K
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTF-GNKLDEFCGSPPYAAPELFQGKKYDG 191
Query: 620 EKCDVYSFGVLALEVIKGKHPRD 642
+ DV+S GV+ ++ G P D
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 112/259 (43%), Gaps = 19/259 (7%)
Query: 444 IGKGGQGSVYK-AELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+GKGG Y+ ++ + E+ A K + + +++ E+ + + ++V F+G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 503 FCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPI 562
F ++V E SL + A + + ++ + + Y+HN+ +
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTE---PEARYFMRQTIQGVQYLHNN---RV 163
Query: 563 VHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKC 622
+HRD+ N+ L+ + + + DFG A ++ D +L GT Y+APE+ + +
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEV 223
Query: 623 DVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISIME 682
D++S G + ++ GK P + + I NE PR P V LI M
Sbjct: 224 DIWSLGCILYTLLVGKPPFE---TSCLKETYIRIKKNEYSVPRHINP---VASALIRRM- 276
Query: 683 VAISCLDESPESRPTIQKV 701
L P RP++ ++
Sbjct: 277 -----LHADPTLRPSVAEL 290
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 8/206 (3%)
Query: 437 DFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLT-GIRH 494
DF+ +GKG G V+ AE + + A+K + + + E + L+ H
Sbjct: 19 DFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 78
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+ + + F V EYL G L + + + ++ ++ L ++
Sbjct: 79 PFLTHMFCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAEIILGLQFL 135
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ IV+RD+ N+LLD + ++DFG K + E GT Y+APE+
Sbjct: 136 HSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILL 192
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
K D +SFGVL E++ G+ P
Sbjct: 193 GQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 94/198 (47%), Gaps = 11/198 (5%)
Query: 443 CIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQ--QEFLNEVKTLTGIRHRNIVK 499
+G G G+V+K +P GE + + + + Q Q + + + + H +IV+
Sbjct: 38 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 97
Query: 500 FYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCF 559
G C + +V +YL +GSL + A LG +N + + Y+
Sbjct: 98 LLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGA--LGPQLLLNWGVQIAKGMYYLEEHG- 153
Query: 560 PPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN--WAELAGTYGYVAPELAYTMK 617
+VHR+++++NVLL ++ V+DFG A L PD ++E ++A E + K
Sbjct: 154 --MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK 211
Query: 618 VTEKCDVYSFGVLALEVI 635
T + DV+S+GV E++
Sbjct: 212 YTHQSDVWSYGVTVWELM 229
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 94/198 (47%), Gaps = 11/198 (5%)
Query: 443 CIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQ--QEFLNEVKTLTGIRHRNIVK 499
+G G G+V+K +P GE + + + + Q Q + + + + H +IV+
Sbjct: 20 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 79
Query: 500 FYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCF 559
G C + +V +YL +GSL + A LG +N + + Y+
Sbjct: 80 LLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGA--LGPQLLLNWGVQIAKGMYYLEEHG- 135
Query: 560 PPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN--WAELAGTYGYVAPELAYTMK 617
+VHR+++++NVLL ++ V+DFG A L PD ++E ++A E + K
Sbjct: 136 --MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK 193
Query: 618 VTEKCDVYSFGVLALEVI 635
T + DV+S+GV E++
Sbjct: 194 YTHQSDVWSYGVTVWELM 211
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G G+ + + +L +G VAVK + + + E++ L RH +I+K Y
Sbjct: 21 VGTFGKVKIGEHQL-TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQV 79
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
S F+V EY+ G L + +++ + + + ++ A+ Y H +V
Sbjct: 80 ISTPTDFFMVMEYVSGGELFDYICKHGRVEEM---EARRLFQQILSAVDYCHRHM---VV 133
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPE-LAYTMKVTEKC 622
HRD+ +NVLLD A ++DFG + + D G+ Y APE ++ + +
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRTSCGSPNYAAPEVISGRLYAGPEV 192
Query: 623 DVYSFGVLALEVIKGKHPRD 642
D++S GV+ ++ G P D
Sbjct: 193 DIWSCGVILYALLCGTLPFD 212
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 91/207 (43%), Gaps = 16/207 (7%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFY- 501
+G GG G V + +GE VA+K+ L + +++ + E++ + + H N+V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPK--NRERWCLEIQIMKKLNHPNVVSARE 80
Query: 502 ---GFCSHARHSF--IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHN 556
G A + + EY E G L L+ L ++ + AL Y+H
Sbjct: 81 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 140
Query: 557 DCFPPIVHRDISSKNVLLDLENEA---HVSDFGTAKFLKPDSSNWAELAGTYGYVAPELA 613
+ I+HRD+ +N++L + + D G AK L E GT Y+APEL
Sbjct: 141 N---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD-QGELCTEFVGTLQYLAPELL 196
Query: 614 YTMKVTEKCDVYSFGVLALEVIKGKHP 640
K T D +SFG LA E I G P
Sbjct: 197 EQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 95/215 (44%), Gaps = 20/215 (9%)
Query: 435 TNDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSP-----LPSEMASQQEFLNEVKT 488
T+ ++ IG G G+VYKA P SG VA+K P LP + L +
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALL---RR 59
Query: 489 LTGIRHRNIVKFYGFCSHARHS-----FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNV 543
L H N+V+ C+ +R +V+E+++ + + A L ++
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYL--DKAPPPGLPAETIKDL 117
Query: 544 IKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG 603
++ + L ++H +C IVHRD+ +N+L+ ++DFG A+ + + +
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV- 173
Query: 604 TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGK 638
T Y APE+ D++S G + E+ + K
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 114/270 (42%), Gaps = 33/270 (12%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQ--EFLNEVKTLTGIRHRNIVKF 500
+G G G+VYK +P GE V + L + EF++E + + H ++V+
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 501 YGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
G C +V + + G L + ++G +N + + Y+
Sbjct: 106 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHK--DNIGSQLLLNWCVQIAKGMMYLEER--- 159
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPELAYTMKV 618
+VHRD++++NVL+ N ++DFG A+ L+ D + G ++A E + K
Sbjct: 160 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKF 219
Query: 619 TEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLD-----PRLPTPSHN 672
T + DV+S+GV E++ G P D I E+ D RLP P
Sbjct: 220 THQSDVWSYGVTIWELMTFGGKPYD------------GIPTREIPDLLEKGERLPQPPIC 267
Query: 673 VQDKLISIMEVAISCLDESPESRPTIQKVS 702
I + V + C +SRP ++++
Sbjct: 268 T----IDVYMVMVKCWMIDADSRPKFKELA 293
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 114/270 (42%), Gaps = 33/270 (12%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQ--EFLNEVKTLTGIRHRNIVKF 500
+G G G+VYK +P GE V + L + EF++E + + H ++V+
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 501 YGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
G C +V + + G L + ++G +N + + Y+
Sbjct: 83 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHK--DNIGSQLLLNWCVQIAKGMMYLEER--- 136
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPELAYTMKV 618
+VHRD++++NVL+ N ++DFG A+ L+ D + G ++A E + K
Sbjct: 137 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKF 196
Query: 619 TEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLD-----PRLPTPSHN 672
T + DV+S+GV E++ G P D I E+ D RLP P
Sbjct: 197 THQSDVWSYGVTIWELMTFGGKPYD------------GIPTREIPDLLEKGERLPQPPIC 244
Query: 673 VQDKLISIMEVAISCLDESPESRPTIQKVS 702
I + V + C +SRP ++++
Sbjct: 245 T----IDVYMVMVKCWMIDADSRPKFKELA 270
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 93/212 (43%), Gaps = 11/212 (5%)
Query: 433 RVT-NDFDDEHCIGKGGQGSV-YKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLT 490
RVT N+F+ +GKG G V E +G A+K + L E + L
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 63
Query: 491 GIRHRNIVKF-YGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKG-VV 548
RH + Y F +H R F++ EY G L LS + + R +V
Sbjct: 64 NSRHPFLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRERVFSE----DRARFYGAEIV 118
Query: 549 DALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYV 608
AL Y+H++ +V+RD+ +N++LD + ++DFG K D + GT Y+
Sbjct: 119 SALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYL 176
Query: 609 APELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
APE+ D + GV+ E++ G+ P
Sbjct: 177 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 19/201 (9%)
Query: 444 IGKGGQGSVYKAE-LPSGEIVAVKKF----HSPLPSEMASQQEFLNEVKTLTGIRHRNIV 498
IG+G G V+K +G+IVA+KKF P+ ++A L E++ L ++H N+V
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIA-----LREIRMLKQLKHPNLV 65
Query: 499 KFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMH-ND 557
R +V+EY + L + D + + ++ + A+++ H ++
Sbjct: 66 NLLEVFRRKRRLHLVFEYCDHTVLHEL---DRYQRGVPEHLVKSITWQTLQAVNFCHKHN 122
Query: 558 CFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY-TM 616
C +HRD+ +N+L+ + + DFG A+ L S + + T Y +PEL
Sbjct: 123 C----IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDT 178
Query: 617 KVTEKCDVYSFGVLALEVIKG 637
+ DV++ G + E++ G
Sbjct: 179 QYGPPVDVWAIGCVFAELLSG 199
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 91/207 (43%), Gaps = 16/207 (7%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFY- 501
+G GG G V + +GE VA+K+ L + +++ + E++ + + H N+V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPK--NRERWCLEIQIMKKLNHPNVVSARE 79
Query: 502 ---GFCSHARHSF--IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHN 556
G A + + EY E G L L+ L ++ + AL Y+H
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 139
Query: 557 DCFPPIVHRDISSKNVLLDLENEA---HVSDFGTAKFLKPDSSNWAELAGTYGYVAPELA 613
+ I+HRD+ +N++L + + D G AK L E GT Y+APEL
Sbjct: 140 N---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD-QGELCTEFVGTLQYLAPELL 195
Query: 614 YTMKVTEKCDVYSFGVLALEVIKGKHP 640
K T D +SFG LA E I G P
Sbjct: 196 EQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 94/214 (43%), Gaps = 11/214 (5%)
Query: 431 IIRVT-NDFDDEHCIGKGGQGSV-YKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKT 488
+ RVT N+F+ +GKG G V E +G A+K + L E +
Sbjct: 3 MARVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 62
Query: 489 LTGIRHRNIVKF-YGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKG- 546
L RH + Y F +H R F++ EY G L LS + + R
Sbjct: 63 LQNSRHPFLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRERVFSE----DRARFYGAE 117
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG 606
+V AL Y+H++ +V+RD+ +N++LD + ++DFG K D + GT
Sbjct: 118 IVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPE 175
Query: 607 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y+APE+ D + GV+ E++ G+ P
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 106/219 (48%), Gaps = 26/219 (11%)
Query: 438 FDDEHCIGKGGQGSVYK-AELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR--- 493
+D + IG+G V + +G AVK + +E S ++ L EV+ T
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIME--VTAERLSPEQ-LEEVREATRRETHI 152
Query: 494 ------HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGV 547
H +I+ + F+V++ + G L L+ A L + ++++ +
Sbjct: 153 LRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVA---LSEKETRSIMRSL 209
Query: 548 VDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGY 607
++A+S++H + IVHRD+ +N+LLD + +SDFG + L+P EL GT GY
Sbjct: 210 LEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEP-GEKLRELCGTPGY 265
Query: 608 VAPE-LAYTMKVT-----EKCDVYSFGVLALEVIKGKHP 640
+APE L +M T ++ D+++ GV+ ++ G P
Sbjct: 266 LAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 111/259 (42%), Gaps = 19/259 (7%)
Query: 444 IGKGGQGSVYK-AELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+GKGG Y+ ++ + E+ A K + + +++ E+ + + ++V F+G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 503 FCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPI 562
F ++V E SL + A + + ++ + + Y+HN+ +
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTE---PEARYFMRQTIQGVQYLHNN---RV 163
Query: 563 VHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKC 622
+HRD+ N+ L+ + + + DFG A ++ D L GT Y+APE+ + +
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEV 223
Query: 623 DVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISIME 682
D++S G + ++ GK P + + I NE PR P V LI M
Sbjct: 224 DIWSLGCILYTLLVGKPPFE---TSCLKETYIRIKKNEYSVPRHINP---VASALIRRM- 276
Query: 683 VAISCLDESPESRPTIQKV 701
L P RP++ ++
Sbjct: 277 -----LHADPTLRPSVAEL 290
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 93/212 (43%), Gaps = 11/212 (5%)
Query: 433 RVT-NDFDDEHCIGKGGQGSV-YKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLT 490
RVT N+F+ +GKG G V E +G A+K + L E + L
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 65
Query: 491 GIRHRNIVKF-YGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKG-VV 548
RH + Y F +H R F++ EY G L LS + + R +V
Sbjct: 66 NSRHPFLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRERVFSE----DRARFYGAEIV 120
Query: 549 DALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYV 608
AL Y+H++ +V+RD+ +N++LD + ++DFG K D + GT Y+
Sbjct: 121 SALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYL 178
Query: 609 APELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
APE+ D + GV+ E++ G+ P
Sbjct: 179 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 94/218 (43%), Gaps = 23/218 (10%)
Query: 435 TNDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSP--------LPSEMASQQEFLNE 485
T+ ++ IG G G+VYKA P SG VA+K P LP + L
Sbjct: 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALL-- 65
Query: 486 VKTLTGIRHRNIVKFYGFCSHARHS-----FIVYEYLEMGSLAMILSNDAAAKDLGWTKR 540
+ L H N+V+ C+ +R +V+E+++ + + A L
Sbjct: 66 -RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYL--DKAPPPGLPAETI 122
Query: 541 MNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAE 600
++++ + L ++H +C IVHRD+ +N+L+ ++DFG A+ +
Sbjct: 123 KDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LTP 178
Query: 601 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGK 638
+ T Y APE+ D++S G + E+ + K
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 438 FDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLN-EVKTLTGIRHR 495
+ D IG G G VY+A+L SGE+VA+KK + + F N E++ + + H
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 74
Query: 496 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVD 549
NIV+ Y F S VY +Y+ + A + L + +
Sbjct: 75 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 134
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEA-HVSDFGTAKFLKPDSSNWAELAGTYGYV 608
+L+Y+H+ I HRDI +N+LLD + + DFG+AK L N + + Y Y
Sbjct: 135 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 190
Query: 609 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 638
APEL + T DV+S G + E++ G+
Sbjct: 191 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 438 FDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLN-EVKTLTGIRHR 495
+ D IG G G VY+A+L SGE+VA+KK + + F N E++ + + H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 73
Query: 496 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVD 549
NIV+ Y F S VY +Y+ + A + L + +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEA-HVSDFGTAKFLKPDSSNWAELAGTYGYV 608
+L+Y+H+ I HRDI +N+LLD + + DFG+AK L N + + Y Y
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 189
Query: 609 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 638
APEL + T DV+S G + E++ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 111/259 (42%), Gaps = 19/259 (7%)
Query: 444 IGKGGQGSVYK-AELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+GKGG Y+ ++ + E+ A K + + +++ E+ + + ++V F+G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 503 FCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPI 562
F ++V E SL + A + + ++ + + Y+HN+ +
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTE---PEARYFMRQTIQGVQYLHNN---RV 163
Query: 563 VHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKC 622
+HRD+ N+ L+ + + + DFG A ++ D L GT Y+APE+ + +
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEV 223
Query: 623 DVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISIME 682
D++S G + ++ GK P + + I NE PR P V LI M
Sbjct: 224 DIWSLGCILYTLLVGKPPFE---TSCLKETYIRIKKNEYSVPRHINP---VASALIRRM- 276
Query: 683 VAISCLDESPESRPTIQKV 701
L P RP++ ++
Sbjct: 277 -----LHADPTLRPSVAEL 290
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 91/202 (45%), Gaps = 18/202 (8%)
Query: 444 IGKGGQGSVYKAELP-----SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIV 498
+GKG GSV +G +VAVK+ P + Q++F E++ L + IV
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ---QRDFQREIQILKALHSDFIV 75
Query: 499 KFYGFC-SHARHSF-IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHN 556
K+ G R S +V EYL G L L A D ++ + + + Y+ +
Sbjct: 76 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDA--SRLLLYSSQICKGMEYLGS 133
Query: 557 DCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG---YVAPELA 613
VHRD++++N+L++ E ++DFG AK L D + + APE
Sbjct: 134 R---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 190
Query: 614 YTMKVTEKCDVYSFGVLALEVI 635
+ + DV+SFGV+ E+
Sbjct: 191 SDNIFSRQSDVWSFGVVLYELF 212
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 91/202 (45%), Gaps = 18/202 (8%)
Query: 444 IGKGGQGSVYKAELP-----SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIV 498
+GKG GSV +G +VAVK+ P + Q++F E++ L + IV
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ---QRDFQREIQILKALHSDFIV 74
Query: 499 KFYGFC-SHARHSF-IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHN 556
K+ G R S +V EYL G L L A D ++ + + + Y+ +
Sbjct: 75 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDA--SRLLLYSSQICKGMEYLGS 132
Query: 557 DCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG---YVAPELA 613
VHRD++++N+L++ E ++DFG AK L D + + APE
Sbjct: 133 R---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 189
Query: 614 YTMKVTEKCDVYSFGVLALEVI 635
+ + DV+SFGV+ E+
Sbjct: 190 SDNIFSRQSDVWSFGVVLYELF 211
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 438 FDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLN-EVKTLTGIRHR 495
+ D IG G G VY+A+L SGE+VA+KK + + F N E++ + + H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 73
Query: 496 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVD 549
NIV+ Y F S VY +Y+ + A + L + +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEA-HVSDFGTAKFLKPDSSNWAELAGTYGYV 608
+L+Y+H+ I HRDI +N+LLD + + DFG+AK L N + + Y Y
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 189
Query: 609 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 638
APEL + T DV+S G + E++ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 91/202 (45%), Gaps = 18/202 (8%)
Query: 444 IGKGGQGSVYKAELP-----SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIV 498
+GKG GSV +G +VAVK+ P + Q++F E++ L + IV
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ---QRDFQREIQILKALHSDFIV 87
Query: 499 KFYGFC-SHARHSF-IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHN 556
K+ G R S +V EYL G L L A D ++ + + + Y+ +
Sbjct: 88 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDA--SRLLLYSSQICKGMEYLGS 145
Query: 557 DCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG---YVAPELA 613
VHRD++++N+L++ E ++DFG AK L D + + APE
Sbjct: 146 R---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 202
Query: 614 YTMKVTEKCDVYSFGVLALEVI 635
+ + DV+SFGV+ E+
Sbjct: 203 SDNIFSRQSDVWSFGVVLYELF 224
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 438 FDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLN-EVKTLTGIRHR 495
+ D IG G G VY+A+L SGE+VA+KK + + F N E++ + + H
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 77
Query: 496 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVD 549
NIV+ Y F S VY +Y+ + A + L + +
Sbjct: 78 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 137
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEA-HVSDFGTAKFLKPDSSNWAELAGTYGYV 608
+L+Y+H+ I HRDI +N+LLD + + DFG+AK L N + + Y Y
Sbjct: 138 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 193
Query: 609 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 638
APEL + T DV+S G + E++ G+
Sbjct: 194 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 442 HCIGKGGQGSVYKAELPSGE----IVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNI 497
CIG+G G V++ S E VA+K + + +++FL E T+ H +I
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHI 73
Query: 498 VKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHND 557
VK G + +I+ E +G L L + DL + + AL+Y+ +
Sbjct: 74 VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLA--SLILYAYQLSTALAYLESK 130
Query: 558 CFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPELAYT 615
F VHRDI+++NVL+ + + DFG +++++ DS+ + G ++APE
Sbjct: 131 RF---VHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINF 186
Query: 616 MKVTEKCDVYSFGVLALEVI 635
+ T DV+ FGV E++
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 93/203 (45%), Gaps = 12/203 (5%)
Query: 443 CIGKGGQGSVYKAE-LPSGEIVAVKKF-HSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
IGKG V A + +G+ VAVK + L S +S Q+ EV+ + + H NIVK
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNS--SSLQKLFREVRIMKVLNHPNIVKL 78
Query: 501 YGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ + ++V EY G + L K+ + + +V A+ Y H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK---FRQIVSAVQYCHQKF-- 133
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVT- 619
IVHRD+ ++N+LLD + ++DFG + + G+ Y APEL K
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 620 EKCDVYSFGVLALEVIKGKHPRD 642
+ DV+S GV+ ++ G P D
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 8/205 (3%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+F IG+G G VYKA +GE+VA+KK +E + E+ L + H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 64
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NIVK ++V+E+L M + ++ L K + + ++ L++
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIK--SYLFQLLQGLAFC 122
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRD+ +N+L++ E ++DFG A+ + T Y APE+
Sbjct: 123 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 615 TMK-VTEKCDVYSFGVLALEVIKGK 638
K + D++S G + E++ +
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 93/212 (43%), Gaps = 11/212 (5%)
Query: 433 RVT-NDFDDEHCIGKGGQGSV-YKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLT 490
RVT N+F+ +GKG G V E +G A+K + L E + L
Sbjct: 147 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 206
Query: 491 GIRHRNIVKF-YGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKG-VV 548
RH + Y F +H R F++ EY G L LS + + R +V
Sbjct: 207 NSRHPFLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRERVFSE----DRARFYGAEIV 261
Query: 549 DALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYV 608
AL Y+H++ +V+RD+ +N++LD + ++DFG K D + GT Y+
Sbjct: 262 SALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYL 319
Query: 609 APELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
APE+ D + GV+ E++ G+ P
Sbjct: 320 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 435 TNDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSP-----LPSEMASQQEFLNEVKT 488
T+ ++ IG G G+VYKA P SG VA+K P LP + L +
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALL---RR 59
Query: 489 LTGIRHRNIVKFYGFCSHARHS-----FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNV 543
L H N+V+ C+ +R +V+E+++ + + A L ++
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYL--DKAPPPGLPAETIKDL 117
Query: 544 IKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG 603
++ + L ++H +C IVHRD+ +N+L+ ++DFG A+ + +
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LDPVVV 173
Query: 604 TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGK 638
T Y APE+ D++S G + E+ + K
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 93/212 (43%), Gaps = 11/212 (5%)
Query: 433 RVT-NDFDDEHCIGKGGQGSV-YKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLT 490
RVT N+F+ +GKG G V E +G A+K + L E + L
Sbjct: 144 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 203
Query: 491 GIRHRNIVKF-YGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKG-VV 548
RH + Y F +H R F++ EY G L LS + + R +V
Sbjct: 204 NSRHPFLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRERVFSE----DRARFYGAEIV 258
Query: 549 DALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYV 608
AL Y+H++ +V+RD+ +N++LD + ++DFG K D + GT Y+
Sbjct: 259 SALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYL 316
Query: 609 APELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
APE+ D + GV+ E++ G+ P
Sbjct: 317 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 438 FDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLN-EVKTLTGIRHR 495
+ D IG G G VY+A+L SGE+VA+KK + + F N E++ + + H
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 85
Query: 496 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVD 549
NIV+ Y F S VY +Y+ + A + L + +
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEA-HVSDFGTAKFLKPDSSNWAELAGTYGYV 608
+L+Y+H+ I HRDI +N+LLD + + DFG+AK L N + + Y Y
Sbjct: 146 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 201
Query: 609 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 638
APEL + T DV+S G + E++ G+
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 438 FDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLN-EVKTLTGIRHR 495
+ D IG G G VY+A+L SGE+VA+KK + + F N E++ + + H
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 92
Query: 496 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVD 549
NIV+ Y F S VY +Y+ + A + L + +
Sbjct: 93 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 152
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEA-HVSDFGTAKFLKPDSSNWAELAGTYGYV 608
+L+Y+H+ I HRDI +N+LLD + + DFG+AK L N + + Y Y
Sbjct: 153 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 208
Query: 609 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 638
APEL + T DV+S G + E++ G+
Sbjct: 209 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 93/203 (45%), Gaps = 12/203 (5%)
Query: 443 CIGKGGQGSVYKAE-LPSGEIVAVKKF-HSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
IGKG V A + +G+ VAVK + L S +S Q+ EV+ + + H NIVK
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNS--SSLQKLFREVRIMKVLNHPNIVKL 78
Query: 501 YGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ + ++V EY G + L K+ + + +V A+ Y H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK---FRQIVSAVQYCHQKF-- 133
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVT- 619
IVHRD+ ++N+LLD + ++DFG + + G+ Y APEL K
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 620 EKCDVYSFGVLALEVIKGKHPRD 642
+ DV+S GV+ ++ G P D
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 438 FDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLN-EVKTLTGIRHR 495
+ D IG G G VY+A+L SGE+VA+KK + + F N E++ + + H
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 81
Query: 496 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVD 549
NIV+ Y F S VY +Y+ + A + L + +
Sbjct: 82 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 141
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEA-HVSDFGTAKFLKPDSSNWAELAGTYGYV 608
+L+Y+H+ I HRDI +N+LLD + + DFG+AK L N + + Y Y
Sbjct: 142 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 197
Query: 609 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 638
APEL + T DV+S G + E++ G+
Sbjct: 198 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 438 FDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLN-EVKTLTGIRHR 495
+ D IG G G VY+A+L SGE+VA+KK + + F N E++ + + H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 73
Query: 496 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVD 549
NIV+ Y F S VY +Y+ + A + L + +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEA-HVSDFGTAKFLKPDSSNWAELAGTYGYV 608
+L+Y+H+ I HRDI +N+LLD + + DFG+AK L N + + Y Y
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 189
Query: 609 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 638
APEL + T DV+S G + E++ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 8/205 (3%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+F IG+G G VYKA +GE+VA+KK +E + E+ L + H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 64
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NIVK ++V+E+L M + ++ L K + + ++ L++
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 122
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRD+ +N+L++ E ++DFG A+ + T Y APE+
Sbjct: 123 HSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 615 TMK-VTEKCDVYSFGVLALEVIKGK 638
K + D++S G + E++ +
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 442 HCIGKGGQGSVYKAELPSGE----IVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNI 497
CIG+G G V++ S E VA+K + + +++FL E T+ H +I
Sbjct: 44 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHI 101
Query: 498 VKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHND 557
VK G + +I+ E +G L L + DL + + AL+Y+ +
Sbjct: 102 VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQLSTALAYLESK 158
Query: 558 CFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPELAYT 615
F VHRDI+++NVL+ + + DFG +++++ DS+ + G ++APE
Sbjct: 159 RF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINF 214
Query: 616 MKVTEKCDVYSFGVLALEVI 635
+ T DV+ FGV E++
Sbjct: 215 RRFTSASDVWMFGVCMWEIL 234
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 442 HCIGKGGQGSVYKAELPSGE----IVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNI 497
CIG+G G V++ S E VA+K + + +++FL E T+ H +I
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHI 73
Query: 498 VKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHND 557
VK G + +I+ E +G L L + DL + + AL+Y+ +
Sbjct: 74 VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQLSTALAYLESK 130
Query: 558 CFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPELAYT 615
F VHRDI+++NVL+ + + DFG +++++ DS+ + G ++APE
Sbjct: 131 RF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINF 186
Query: 616 MKVTEKCDVYSFGVLALEVI 635
+ T DV+ FGV E++
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 442 HCIGKGGQGSVYKAELPSGE----IVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNI 497
CIG+G G V++ S E VA+K + + +++FL E T+ H +I
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHI 73
Query: 498 VKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHND 557
VK G + +I+ E +G L L + DL + + AL+Y+ +
Sbjct: 74 VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQLSTALAYLESK 130
Query: 558 CFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPELAYT 615
F VHRDI+++NVL+ + + DFG +++++ DS+ + G ++APE
Sbjct: 131 RF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINF 186
Query: 616 MKVTEKCDVYSFGVLALEVI 635
+ T DV+ FGV E++
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 438 FDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLN-EVKTLTGIRHR 495
+ D IG G G VY+A+L SGE+VA+KK + + F N E++ + + H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQGKAFKNRELQIMRKLDHC 73
Query: 496 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVD 549
NIV+ Y F S VY +Y+ + A + L + +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEA-HVSDFGTAKFLKPDSSNWAELAGTYGYV 608
+L+Y+H+ I HRDI +N+LLD + + DFG+AK L N + + Y Y
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 189
Query: 609 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 638
APEL + T DV+S G + E++ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 20/215 (9%)
Query: 437 DFDDEHCIGKGGQGSVYKAELPSGE-IVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHR 495
DF+ IG+G G V ++ + E I A+K + + A F E L +
Sbjct: 91 DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQ 150
Query: 496 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSN--DAAAKDLGWTKRMNVIKGV--VDAL 551
I + H ++V +Y G L +LS D +D+ R + + V +D++
Sbjct: 151 WITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMA---RFYIGEMVLAIDSI 207
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELA-GTYGYVAP 610
+H VHRDI NVLLD+ ++DFG+ + D + + +A GT Y++P
Sbjct: 208 HQLH------YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISP 261
Query: 611 ELAYTM-----KVTEKCDVYSFGVLALEVIKGKHP 640
E+ M K +CD +S GV E++ G+ P
Sbjct: 262 EILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 8/205 (3%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+F IG+G G VYKA +GE+VA+KK +E + E+ L + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 62
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NIVK ++V+E+L M + ++ L K + + ++ L++
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 120
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRD+ +N+L++ E ++DFG A+ + T Y APE+
Sbjct: 121 HSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 615 TMK-VTEKCDVYSFGVLALEVIKGK 638
K + D++S G + E++ +
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 442 HCIGKGGQGSVYKAELPSGE----IVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNI 497
CIG+G G V++ S E VA+K + + +++FL E T+ H +I
Sbjct: 21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHI 78
Query: 498 VKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHND 557
VK G + +I+ E +G L L + DL + + AL+Y+ +
Sbjct: 79 VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQLSTALAYLESK 135
Query: 558 CFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPELAYT 615
F VHRDI+++NVL+ + + DFG +++++ DS+ + G ++APE
Sbjct: 136 RF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINF 191
Query: 616 MKVTEKCDVYSFGVLALEVI 635
+ T DV+ FGV E++
Sbjct: 192 RRFTSASDVWMFGVCMWEIL 211
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 8/205 (3%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+F IG+G G VYKA +GE+VA+KK +E + E+ L + H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 63
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NIVK ++V+E+L M + ++ L K + + ++ L++
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIK--SYLFQLLQGLAFC 121
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRD+ +N+L++ E ++DFG A+ + T Y APE+
Sbjct: 122 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 615 TMK-VTEKCDVYSFGVLALEVIKGK 638
K + D++S G + E++ +
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 20/215 (9%)
Query: 437 DFDDEHCIGKGGQGSVYKAELPSGE-IVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHR 495
DF+ IG+G G V ++ + E I A+K + + A F E L +
Sbjct: 75 DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQ 134
Query: 496 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSN--DAAAKDLGWTKRMNVIKGV--VDAL 551
I + H ++V +Y G L +LS D +D+ R + + V +D++
Sbjct: 135 WITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMA---RFYIGEMVLAIDSI 191
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELA-GTYGYVAP 610
+H VHRDI NVLLD+ ++DFG+ + D + + +A GT Y++P
Sbjct: 192 HQLH------YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISP 245
Query: 611 ELAYTM-----KVTEKCDVYSFGVLALEVIKGKHP 640
E+ M K +CD +S GV E++ G+ P
Sbjct: 246 EILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 438 FDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLN-EVKTLTGIRHR 495
+ D IG G G VY+A+L SGE+VA+KK + + F N E++ + + H
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 85
Query: 496 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVD 549
NIV+ Y F S VY +Y+ + A + L + +
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEA-HVSDFGTAKFLKPDSSNWAELAGTYGYV 608
+L+Y+H+ I HRDI +N+LLD + + DFG+AK L N + + Y Y
Sbjct: 146 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 201
Query: 609 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 638
APEL + T DV+S G + E++ G+
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 442 HCIGKGGQGSVYKAELPSGE----IVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNI 497
CIG+G G V++ S E VA+K + + +++FL E T+ H +I
Sbjct: 19 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHI 76
Query: 498 VKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHND 557
VK G + +I+ E +G L L + DL + + AL+Y+ +
Sbjct: 77 VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQLSTALAYLESK 133
Query: 558 CFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPELAYT 615
F VHRDI+++NVL+ + + DFG +++++ DS+ + G ++APE
Sbjct: 134 RF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINF 189
Query: 616 MKVTEKCDVYSFGVLALEVI 635
+ T DV+ FGV E++
Sbjct: 190 RRFTSASDVWMFGVCMWEIL 209
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 33/218 (15%)
Query: 444 IGKGGQGSVYKAE-LPSGEIVAVKKFHS-----PLPSEMASQQEFLNEVKTLTGIRHRNI 497
+G+G +V++ +G++ A+K F++ P+ +M E + L + H+NI
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQM-------REFEVLKKLNHKNI 69
Query: 498 VKFYGFC--SHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMH 555
VK + + RH ++ E+ GSL +L + A L ++ + V++ VV ++++
Sbjct: 70 VKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR 129
Query: 556 NDCFPPIVHRDISSKNVLL----DLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPE 611
+ IVHR+I N++ D ++ ++DFG A+ L+ D + L GT Y+ P+
Sbjct: 130 ENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE-DDEQFVSLYGTEEYLHPD 185
Query: 612 LAYTMKVTEK---------CDVYSFGVLALEVIKGKHP 640
+ Y V K D++S GV G P
Sbjct: 186 M-YERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 92/203 (45%), Gaps = 12/203 (5%)
Query: 443 CIGKGGQGSVYKAE-LPSGEIVAVKKF-HSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
IGKG V A + +G+ VAVK + L S +S Q+ EV+ + + H NIVK
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNS--SSLQKLFREVRIMKVLNHPNIVKL 78
Query: 501 YGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ + ++V EY G + L K+ + + +V A+ Y H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK---FRQIVSAVQYCHQKF-- 133
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVT- 619
IVHRD+ ++N+LLD + ++DFG + + G Y APEL K
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDAFCGAPPYAAPELFQGKKYDG 191
Query: 620 EKCDVYSFGVLALEVIKGKHPRD 642
+ DV+S GV+ ++ G P D
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 442 HCIGKGGQGSVYKAELPSGE----IVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNI 497
CIG+G G V++ S E VA+K + + +++FL E T+ H +I
Sbjct: 13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHI 70
Query: 498 VKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHND 557
VK G + +I+ E +G L L + DL + + AL+Y+ +
Sbjct: 71 VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQLSTALAYLESK 127
Query: 558 CFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPELAYT 615
F VHRDI+++NVL+ + + DFG +++++ DS+ + G ++APE
Sbjct: 128 RF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINF 183
Query: 616 MKVTEKCDVYSFGVLALEVI 635
+ T DV+ FGV E++
Sbjct: 184 RRFTSASDVWMFGVCMWEIL 203
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 438 FDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLN-EVKTLTGIRHR 495
+ D IG G G VY+A+L SGE+VA+KK + + F N E++ + + H
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 86
Query: 496 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVD 549
NIV+ Y F S VY +Y+ + A + L + +
Sbjct: 87 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 146
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEA-HVSDFGTAKFLKPDSSNWAELAGTYGYV 608
+L+Y+H+ I HRDI +N+LLD + + DFG+AK L N + + Y Y
Sbjct: 147 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 202
Query: 609 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 638
APEL + T DV+S G + E++ G+
Sbjct: 203 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 115/256 (44%), Gaps = 28/256 (10%)
Query: 463 VAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGFCSHARHSFIVYEYLEMGS 521
VAVK S ++ ++ ++E+K ++ + +H NIV G C+H ++ EY G
Sbjct: 71 VAVKMLKSTAHAD--EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 128
Query: 522 LAMILSNDAAA-------KDLGWTKRMNVIKGVVDALSYMHN-DCFPPIVHRDISSKNVL 573
L L A A + L ++ V ++++ + +C +HRD++++NVL
Sbjct: 129 LLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVL 184
Query: 574 LDLENEAHVSDFGTAKFLKPDSSNWAELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLA 631
L + A + DFG A+ + DS+ + ++APE + T + DV+S+G+L
Sbjct: 185 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 244
Query: 632 LEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDE 690
E+ G +P ++ +M P + + SIM+ +C
Sbjct: 245 WEIFSLGLNPYPGILVNSKFYKLVKDGY-QMAQPAFAPKN------IYSIMQ---ACWAL 294
Query: 691 SPESRPTIQKVSQLLK 706
P RPT Q++ L+
Sbjct: 295 EPTHRPTFQQICSFLQ 310
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 442 HCIGKGGQGSVYKAELPSGE----IVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNI 497
CIG+G G V++ S E VA+K + + +++FL E T+ H +I
Sbjct: 18 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHI 75
Query: 498 VKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHND 557
VK G + +I+ E +G L L + DL + + AL+Y+ +
Sbjct: 76 VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQLSTALAYLESK 132
Query: 558 CFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPELAYT 615
F VHRDI+++NVL+ + + DFG +++++ DS+ + G ++APE
Sbjct: 133 RF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINF 188
Query: 616 MKVTEKCDVYSFGVLALEVI 635
+ T DV+ FGV E++
Sbjct: 189 RRFTSASDVWMFGVCMWEIL 208
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 438 FDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLN-EVKTLTGIRHR 495
+ D IG G G VY+A+L SGE+VA+KK + + F N E++ + + H
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 107
Query: 496 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVD 549
NIV+ Y F S VY +Y+ + A + L + +
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 167
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEA-HVSDFGTAKFLKPDSSNWAELAGTYGYV 608
+L+Y+H+ I HRDI +N+LLD + + DFG+AK L N + + Y Y
Sbjct: 168 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 223
Query: 609 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 638
APEL + T DV+S G + E++ G+
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 442 HCIGKGGQGSVYKAELPSGE----IVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNI 497
CIG+G G V++ S E VA+K + + +++FL E T+ H +I
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHI 453
Query: 498 VKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHND 557
VK G + +I+ E +G L L + DL + + AL+Y+ +
Sbjct: 454 VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLA--SLILYAYQLSTALAYLESK 510
Query: 558 CFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPELAYT 615
F VHRDI+++NVL+ + + DFG +++++ DS+ + G ++APE
Sbjct: 511 RF---VHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINF 566
Query: 616 MKVTEKCDVYSFGVLALEVI 635
+ T DV+ FGV E++
Sbjct: 567 RRFTSASDVWMFGVCMWEIL 586
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 438 FDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLN-EVKTLTGIRHR 495
+ D IG G G VY+A+L SGE+VA+KK + + F N E++ + + H
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 78
Query: 496 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVD 549
NIV+ Y F S VY +Y+ + A + L + +
Sbjct: 79 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 138
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEA-HVSDFGTAKFLKPDSSNWAELAGTYGYV 608
+L+Y+H+ I HRDI +N+LLD + + DFG+AK L N + + Y Y
Sbjct: 139 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 194
Query: 609 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 638
APEL + T DV+S G + E++ G+
Sbjct: 195 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 12/203 (5%)
Query: 443 CIGKGGQGSVYKAE-LPSGEIVAVKKF-HSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
IGKG V A + +G+ VAV+ + L S +S Q+ EV+ + + H NIVK
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNS--SSLQKLFREVRIMKVLNHPNIVKL 78
Query: 501 YGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ + ++V EY G + L K+ + + +V A+ Y H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK---FRQIVSAVQYCHQKF-- 133
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVT- 619
IVHRD+ ++N+LLD + ++DFG + + G+ Y APEL K
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 620 EKCDVYSFGVLALEVIKGKHPRD 642
+ DV+S GV+ ++ G P D
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 42/225 (18%)
Query: 444 IGKGGQGSVYKAELPS------GEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNI 497
IG+G G V++A P +VAVK ++M Q +F E + + NI
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADM--QADFQREAALMAEFDNPNI 112
Query: 498 VKFYGFCSHARHSFIVYEYLEMGSLAMILS---------------------NDAAAKDLG 536
VK G C+ + +++EY+ G L L + L
Sbjct: 113 VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 172
Query: 537 WTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFG------TAKF 590
+++ + + V ++Y+ F VHRD++++N L+ ++DFG +A +
Sbjct: 173 CAEQLCIARQVAAGMAYLSERKF---VHRDLATRNCLVGENMVVKIADFGLSRNIYSADY 229
Query: 591 LKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVI 635
K D ++ A ++ PE + + T + DV+++GV+ E+
Sbjct: 230 YKADGND----AIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 270
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 33/218 (15%)
Query: 444 IGKGGQGSVYKAE-LPSGEIVAVKKFHS-----PLPSEMASQQEFLNEVKTLTGIRHRNI 497
+G+G +V++ +G++ A+K F++ P+ +M E + L + H+NI
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQM-------REFEVLKKLNHKNI 69
Query: 498 VKFYGFC--SHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMH 555
VK + + RH ++ E+ GSL +L + A L ++ + V++ VV ++++
Sbjct: 70 VKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR 129
Query: 556 NDCFPPIVHRDISSKNVLL----DLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPE 611
+ IVHR+I N++ D ++ ++DFG A+ L+ D + L GT Y+ P+
Sbjct: 130 ENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE-DDEQFVXLYGTEEYLHPD 185
Query: 612 LAYTMKVTEK---------CDVYSFGVLALEVIKGKHP 640
+ Y V K D++S GV G P
Sbjct: 186 M-YERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 12/205 (5%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMA--SQQEFLNEVKTLTGIRHRNIVKF 500
+G G G+VYK +P GE V + L + + +E L+E + G+ + +
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 501 YGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
G C + +V + + G L + + LG +N + +SY+ +
Sbjct: 85 LGICLTSTVQ-LVTQLMPYGCLLDHVRENRGR--LGSQDLLNWCMQIAKGMSYLED---V 138
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPELAYTMKV 618
+VHRD++++NVL+ N ++DFG A+ L D + + G ++A E +
Sbjct: 139 RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRF 198
Query: 619 TEKCDVYSFGVLALEVIK-GKHPRD 642
T + DV+S+GV E++ G P D
Sbjct: 199 THQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 8/205 (3%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+F IG+G G VYKA +GE+VA+KK +E + E+ L + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 61
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NIVK ++V+E+L + ++ L K + + ++ LS+
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLSFC 119
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRD+ +N+L++ E ++DFG A+ + T Y APE+
Sbjct: 120 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 615 TMK-VTEKCDVYSFGVLALEVIKGK 638
K + D++S G + E++ +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 115/256 (44%), Gaps = 28/256 (10%)
Query: 463 VAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGFCSHARHSFIVYEYLEMGS 521
VAVK S ++ ++ ++E+K ++ + +H NIV G C+H ++ EY G
Sbjct: 79 VAVKMLKSTAHAD--EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 522 LAMILSNDAAA-------KDLGWTKRMNVIKGVVDALSYMHN-DCFPPIVHRDISSKNVL 573
L L A A + L ++ V ++++ + +C +HRD++++NVL
Sbjct: 137 LLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVL 192
Query: 574 LDLENEAHVSDFGTAKFLKPDSSNWAELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLA 631
L + A + DFG A+ + DS+ + ++APE + T + DV+S+G+L
Sbjct: 193 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 252
Query: 632 LEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDE 690
E+ G +P ++ +M P + + SIM+ +C
Sbjct: 253 WEIFSLGLNPYPGILVNSKFYKLVKDGY-QMAQPAFAPKN------IYSIMQ---ACWAL 302
Query: 691 SPESRPTIQKVSQLLK 706
P RPT Q++ L+
Sbjct: 303 EPTHRPTFQQICSFLQ 318
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDS--SNWAELAGT 604
+V AL Y+H I+HRD+ +N+LL+ + ++DFGTAK L P+S + GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 605 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
YV+PEL ++ D+++ G + +++ G P
Sbjct: 198 AQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 442 HCIGKGGQGSVYKAELPSGE----IVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNI 497
CIG+G G V++ S E VA+K + + +++FL E T+ H +I
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHI 453
Query: 498 VKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHND 557
VK G + +I+ E +G L L + DL + + AL+Y+ +
Sbjct: 454 VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLA--SLILYAYQLSTALAYLESK 510
Query: 558 CFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPELAYT 615
F VHRDI+++NVL+ + + DFG +++++ DS+ + G ++APE
Sbjct: 511 RF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINF 566
Query: 616 MKVTEKCDVYSFGVLALEVI 635
+ T DV+ FGV E++
Sbjct: 567 RRFTSASDVWMFGVCMWEIL 586
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 103/232 (44%), Gaps = 28/232 (12%)
Query: 423 EGKIVYEEIIRVTNDFDDE-HC------IGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPS 474
EG ++ E++ V ++ +E H +G+G G V++ E +G AVKK
Sbjct: 73 EGVLLTEKLKPVDYEYREEVHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRL---- 128
Query: 475 EMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD 534
E+ +E + G+ IV YG I E LE GSL ++ +
Sbjct: 129 EVFRAEELM----ACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPE 184
Query: 535 LGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLE-NEAHVSDFGTAKFLKP 593
+ + + ++ L Y+H+ I+H D+ + NVLL + + A + DFG A L+P
Sbjct: 185 ---DRALYYLGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQP 238
Query: 594 DSSNWAELAGTY-----GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
D + L G Y ++APE+ K DV+S + L ++ G HP
Sbjct: 239 DGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 438 FDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLN-EVKTLTGIRHR 495
+ D IG G G VY+A+L SGE+VA+KK + + F N E++ + + H
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 152
Query: 496 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVD 549
NIV+ Y F S VY +Y+ + A + L + +
Sbjct: 153 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 212
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEA-HVSDFGTAKFLKPDSSNWAELAGTYGYV 608
+L+Y+H+ I HRDI +N+LLD + + DFG+AK L N + + Y Y
Sbjct: 213 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 268
Query: 609 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 638
APEL + T DV+S G + E++ G+
Sbjct: 269 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 91/210 (43%), Gaps = 28/210 (13%)
Query: 444 IGKGGQGSVYKAEL------PSGEIVAVKKFHSPLPSEMASQQE--FLNEVKTLTGIRHR 495
+G G G VY+ ++ PS VAVK LP + Q E FL E ++ + H+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKLNHQ 108
Query: 496 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILS----NDAAAKDLGWTKRMNVIKGVVDAL 551
NIV+ G + FI+ E + G L L + L ++V + +
Sbjct: 109 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENE---AHVSDFGTAKFLKPDSSNWAELAGT---- 604
Y+ + F +HRDI+++N LL A + DFG A+ + +++ G
Sbjct: 169 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 223
Query: 605 YGYVAPELAYTMKVTEKCDVYSFGVLALEV 634
++ PE T K D +SFGVL E+
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 438 FDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLN-EVKTLTGIRHR 495
+ D IG G G VY+A+L SGE+VA+KK + + F N E++ + + H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQGKAFKNRELQIMRKLDHC 73
Query: 496 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVD 549
NIV+ Y F S VY +Y+ + A + L + +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEA-HVSDFGTAKFLKPDSSNWAELAGTYGYV 608
+L+Y+H+ I HRDI +N+LLD + + DFG+AK L N + + Y Y
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 189
Query: 609 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 638
APEL + T DV+S G + E++ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 95 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 150
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ ++E + DFG A+ + + + T Y APE+ M
Sbjct: 151 DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 207
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 208 QTVDIWSVGCIMAELLTGR 226
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 438 FDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLN-EVKTLTGIRHR 495
+ D IG G G VY+A+L SGE+VA+KK + + F N E++ + + H
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 111
Query: 496 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVD 549
NIV+ Y F S VY +Y+ + A + L + +
Sbjct: 112 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 171
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEA-HVSDFGTAKFLKPDSSNWAELAGTYGYV 608
+L+Y+H+ I HRDI +N+LLD + + DFG+AK L N + + Y Y
Sbjct: 172 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 227
Query: 609 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 638
APEL + T DV+S G + E++ G+
Sbjct: 228 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 438 FDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLN-EVKTLTGIRHR 495
+ D IG G G VY+A+L SGE+VA+KK + + F N E++ + + H
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 109
Query: 496 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVD 549
NIV+ Y F S VY +Y+ + A + L + +
Sbjct: 110 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 169
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEA-HVSDFGTAKFLKPDSSNWAELAGTYGYV 608
+L+Y+H+ I HRDI +N+LLD + + DFG+AK L N + + Y Y
Sbjct: 170 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 225
Query: 609 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 638
APEL + T DV+S G + E++ G+
Sbjct: 226 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 438 FDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLN-EVKTLTGIRHR 495
+ D IG G G VY+A+L SGE+VA+KK + + F N E++ + + H
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 107
Query: 496 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVD 549
NIV+ Y F S VY +Y+ + A + L + +
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 167
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEA-HVSDFGTAKFLKPDSSNWAELAGTYGYV 608
+L+Y+H+ I HRDI +N+LLD + + DFG+AK L N + + Y Y
Sbjct: 168 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 223
Query: 609 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 638
APEL + T DV+S G + E++ G+
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 91/210 (43%), Gaps = 28/210 (13%)
Query: 444 IGKGGQGSVYKAEL------PSGEIVAVKKFHSPLPSEMASQQE--FLNEVKTLTGIRHR 495
+G G G VY+ ++ PS VAVK LP + Q E FL E ++ + H+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKLNHQ 94
Query: 496 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILS----NDAAAKDLGWTKRMNVIKGVVDAL 551
NIV+ G + FI+ E + G L L + L ++V + +
Sbjct: 95 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENE---AHVSDFGTAKFLKPDSSNWAELAGT---- 604
Y+ + F +HRDI+++N LL A + DFG A+ + +++ G
Sbjct: 155 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 209
Query: 605 YGYVAPELAYTMKVTEKCDVYSFGVLALEV 634
++ PE T K D +SFGVL E+
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 438 FDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLN-EVKTLTGIRHR 495
+ D IG G G VY+A+L SGE+VA+KK + + F N E++ + + H
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 101
Query: 496 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVD 549
NIV+ Y F S VY +Y+ + A + L + +
Sbjct: 102 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 161
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEA-HVSDFGTAKFLKPDSSNWAELAGTYGYV 608
+L+Y+H+ I HRDI +N+LLD + + DFG+AK L N + + Y Y
Sbjct: 162 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 217
Query: 609 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 638
APEL + T DV+S G + E++ G+
Sbjct: 218 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 95 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 150
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 151 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 207
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 208 QTVDIWSVGCIMAELLTGR 226
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 108
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 109 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 164
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 165 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 221
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 222 QTVDIWSVGCIMAELLTGR 240
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 438 FDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLN-EVKTLTGIRHR 495
+ D IG G G VY+A+L SGE+VA+KK + + F N E++ + + H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQGKAFKNRELQIMRKLDHC 73
Query: 496 NIVKF-YGFCSHARHSFIVY-----EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVD 549
NIV+ Y F S VY +Y+ + A + L + +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEA-HVSDFGTAKFLKPDSSNWAELAGTYGYV 608
+L+Y+H+ I HRDI +N+LLD + + DFG+AK L N + + Y Y
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 189
Query: 609 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 638
APEL + T DV+S G + E++ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 107/273 (39%), Gaps = 40/273 (14%)
Query: 444 IGKGGQGSVYKAEL------PSGEIVAVKKFHSPLPSEMASQQE--FLNEVKTLTGIRHR 495
+G G G VY+ ++ PS VAVK LP + Q E FL E ++ H+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 85
Query: 496 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILS----NDAAAKDLGWTKRMNVIKGVVDAL 551
NIV+ G + FI+ E + G L L + L ++V + +
Sbjct: 86 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 145
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENE---AHVSDFGTAKFLKPDSSNWAELAGT---- 604
Y+ + F +HRDI+++N LL A + DFG A+ + +++ G
Sbjct: 146 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 200
Query: 605 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLD 663
++ PE T K D +SFGVL E+ G P N E+
Sbjct: 201 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP-------YPSKSNQEVLEFVTSG 253
Query: 664 PRLPTPSHNVQDKLISIMEVAISCLDESPESRP 696
R+ P N + IM C PE RP
Sbjct: 254 GRM-DPPKNCPGPVYRIM---TQCWQHQPEDRP 282
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 107
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 108 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 163
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 164 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 220
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 221 QTVDIWSVGCIMAELLTGR 239
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 22/202 (10%)
Query: 448 GQGSVYKAELP--------SGEIVAVKKFHSPLPSEMASQ-QEFLNEVKTLTGIRHRNIV 498
G+G K EL +GE VAVK P + + E++ L + H NIV
Sbjct: 18 GEGHFGKVELCRYDPEGDNTGEQVAVKSLK---PESGGNHIADLKKEIEILRNLYHENIV 74
Query: 499 KFYGFCSHARHSFI--VYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHN 556
K+ G C+ + I + E+L GSL L + +L +++ + + Y+ +
Sbjct: 75 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINL--KQQLKYAVQICKGMDYLGS 132
Query: 557 DCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWA---ELAGTYGYVAPELA 613
+ VHRD++++NVL++ E++ + DFG K ++ D + + APE
Sbjct: 133 RQY---VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL 189
Query: 614 YTMKVTEKCDVYSFGVLALEVI 635
K DV+SFGV E++
Sbjct: 190 MQSKFYIASDVWSFGVTLHELL 211
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 89 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 201
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 22/202 (10%)
Query: 448 GQGSVYKAEL--------PSGEIVAVKKFHSPLPSEMASQ-QEFLNEVKTLTGIRHRNIV 498
G+G K EL +GE VAVK P + + E++ L + H NIV
Sbjct: 30 GEGHFGKVELCRYDPEGDNTGEQVAVKSLK---PESGGNHIADLKKEIEILRNLYHENIV 86
Query: 499 KFYGFCSHARHSFI--VYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHN 556
K+ G C+ + I + E+L GSL L + +L +++ + + Y+ +
Sbjct: 87 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINL--KQQLKYAVQICKGMDYLGS 144
Query: 557 DCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWA---ELAGTYGYVAPELA 613
+ VHRD++++NVL++ E++ + DFG K ++ D + + APE
Sbjct: 145 RQY---VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL 201
Query: 614 YTMKVTEKCDVYSFGVLALEVI 635
K DV+SFGV E++
Sbjct: 202 MQSKFYIASDVWSFGVTLHELL 223
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 91 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 146
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ ++E + DFG A+ + + + T Y APE+ M
Sbjct: 147 DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 203
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 204 QTVDIWSVGCIMAELLTGR 222
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 89/202 (44%), Gaps = 10/202 (4%)
Query: 443 CIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFY 501
IGKG V A + +G VA+K + S Q+ EV+ + + H NIVK +
Sbjct: 19 TIGKGNFAKVKLARHILTGREVAIKIIDKTQLNP-TSLQKLFREVRIMKILNHPNIVKLF 77
Query: 502 GFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPP 561
+ +++ EY G + L K+ + + + +V A+ Y H
Sbjct: 78 EVIETEKTLYLIMEYASGGEVFDYLVAHGRMKE---KEARSKFRQIVSAVQYCHQ---KR 131
Query: 562 IVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVT-E 620
IVHRD+ ++N+LLD + ++DFG + G+ Y APEL K
Sbjct: 132 IVHRDLKAENLLLDADMNIKIADFGFSNEFTV-GGKLDTFCGSPPYAAPELFQGKKYDGP 190
Query: 621 KCDVYSFGVLALEVIKGKHPRD 642
+ DV+S GV+ ++ G P D
Sbjct: 191 EVDVWSLGVILYTLVSGSLPFD 212
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 15/200 (7%)
Query: 442 HCIGKGGQGSVYKAELPSGE----IVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNI 497
CIG+G G V++ S E VA+K + + +++FL E T+ H +I
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHI 73
Query: 498 VKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHND 557
VK G + +I+ E +G L L + DL + + AL+Y+ +
Sbjct: 74 VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLA--SLILYAYQLSTALAYLESK 130
Query: 558 CFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GYVAPELAYT 615
F VHRDI+++NVL+ + + DFG +++++ DS+ G ++APE
Sbjct: 131 RF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTXXKASKGKLPIKWMAPESINF 186
Query: 616 MKVTEKCDVYSFGVLALEVI 635
+ T DV+ FGV E++
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 84
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 85 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 140
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 197
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 198 QTVDIWSVGCIMAELLTGR 216
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IG G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 94 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 149
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 150 DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 206
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 207 QTVDIWSVGCIMAELLTGR 225
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 91/214 (42%), Gaps = 41/214 (19%)
Query: 446 KGGQGSVYKAEL----PSGEIVAVKKFHSPLPSEMASQQ--EFLNEVKTLTGIRHRNIVK 499
K G+GS KA L G +K+ + S M+S++ E EV L ++H NIV+
Sbjct: 31 KIGEGSFGKAILVKSTEDGRQYVIKEINI---SRMSSKEREESRREVAVLANMKHPNIVQ 87
Query: 500 FYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVD---------- 549
+ +IV +Y E G L KR+N KGV+
Sbjct: 88 YRESFEENGSLYIVMDYCEGGDL---------------FKRINAQKGVLFQEDQILDWFV 132
Query: 550 ----ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY 605
AL ++H+ I+HRDI S+N+ L + + DFG A+ L GT
Sbjct: 133 QICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTP 189
Query: 606 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKH 639
Y++PE+ K D+++ G + E+ KH
Sbjct: 190 YYLSPEICENKPYNNKSDIWALGCVLYELCTLKH 223
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 98
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 99 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 154
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 155 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 211
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 212 QTVDIWSVGCIMAELLTGR 230
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 92/199 (46%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 89 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ A T Y APE+ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMAGFVATRWYRAPEIMLNWMHYN 201
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 8/205 (3%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+F IG+G G VYKA +GE+VA+KK +E + E+ L + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 68
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NIVK ++V+E+L + ++ L K + + ++ L++
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 126
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRD+ +N+L++ E ++DFG A+ + T Y APE+
Sbjct: 127 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 183
Query: 615 TMK-VTEKCDVYSFGVLALEVIKGK 638
K + D++S G + E++ +
Sbjct: 184 GXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 101/222 (45%), Gaps = 12/222 (5%)
Query: 421 SFEGKIVYEEIIRVTNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQ 479
+F + + + I V + + +G G GSV A + +G VAVKK P S + ++
Sbjct: 3 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 62
Query: 480 QEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGW 537
+ + E++ L ++H N++ + AR S + YL + L+N + L
Sbjct: 63 RTY-RELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 120
Query: 538 TKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN 597
+I ++ L Y+H+ I+HRD+ N+ ++ + E + DFG A+
Sbjct: 121 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 174
Query: 598 WAELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGK 638
A T Y APE+ M + D++S G + E++ G+
Sbjct: 175 MAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 12/203 (5%)
Query: 443 CIGKGGQGSVYKAE-LPSGEIVAVKKF-HSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
IGKG V A + +G+ VAVK + L S +S Q+ EV+ + H NIVK
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNS--SSLQKLFREVRIXKVLNHPNIVKL 78
Query: 501 YGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ + ++V EY G + L K+ + + +V A+ Y H
Sbjct: 79 FEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKF---RQIVSAVQYCHQKF-- 133
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVT- 619
IVHRD+ ++N+LLD + ++DFG + + G Y APEL K
Sbjct: 134 -IVHRDLKAENLLLDADXNIKIADFGFSNEFTF-GNKLDAFCGAPPYAAPELFQGKKYDG 191
Query: 620 EKCDVYSFGVLALEVIKGKHPRD 642
+ DV+S GV+ ++ G P D
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 90/210 (42%), Gaps = 28/210 (13%)
Query: 444 IGKGGQGSVYKAEL------PSGEIVAVKKFHSPLPSEMASQQE--FLNEVKTLTGIRHR 495
+G G G VY+ ++ PS VAVK LP + Q E FL E ++ H+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 93
Query: 496 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILS----NDAAAKDLGWTKRMNVIKGVVDAL 551
NIV+ G + FI+ E + G L L + L ++V + +
Sbjct: 94 NIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENE---AHVSDFGTAKFLKPDSSNWAELAGT---- 604
Y+ + F +HRDI+++N LL A + DFG A+ + +++ G
Sbjct: 154 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 208
Query: 605 YGYVAPELAYTMKVTEKCDVYSFGVLALEV 634
++ PE T K D +SFGVL E+
Sbjct: 209 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 92/199 (46%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 89 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ A T Y APE+ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMAGFVATRWYRAPEIMLNWMHYN 201
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 90/210 (42%), Gaps = 28/210 (13%)
Query: 444 IGKGGQGSVYKAEL------PSGEIVAVKKFHSPLPSEMASQQE--FLNEVKTLTGIRHR 495
+G G G VY+ ++ PS VAVK LP + Q E FL E ++ H+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 93
Query: 496 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILS----NDAAAKDLGWTKRMNVIKGVVDAL 551
NIV+ G + FI+ E + G L L + L ++V + +
Sbjct: 94 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENE---AHVSDFGTAKFLKPDSSNWAELAGT---- 604
Y+ + F +HRDI+++N LL A + DFG A+ + +++ G
Sbjct: 154 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 208
Query: 605 YGYVAPELAYTMKVTEKCDVYSFGVLALEV 634
++ PE T K D +SFGVL E+
Sbjct: 209 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 8/205 (3%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+F IG+G G VYKA +GE+VA+KK +E + E+ L + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 61
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NIVK ++V+E+L + ++ L K + + ++ L++
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 119
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRD+ +N+L++ E ++DFG A+ + T Y APE+
Sbjct: 120 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 615 TMK-VTEKCDVYSFGVLALEVIKGK 638
K + D++S G + E++ +
Sbjct: 177 GXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 107/273 (39%), Gaps = 40/273 (14%)
Query: 444 IGKGGQGSVYKAEL------PSGEIVAVKKFHSPLPSEMASQQE--FLNEVKTLTGIRHR 495
+G G G VY+ ++ PS VAVK LP + Q E FL E ++ H+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 108
Query: 496 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILS----NDAAAKDLGWTKRMNVIKGVVDAL 551
NIV+ G + FI+ E + G L L + L ++V + +
Sbjct: 109 NIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENE---AHVSDFGTAKFLKPDSSNWAELAGT---- 604
Y+ + F +HRDI+++N LL A + DFG A+ + +++ G
Sbjct: 169 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 223
Query: 605 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLD 663
++ PE T K D +SFGVL E+ G P N E+
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP-------YPSKSNQEVLEFVTSG 276
Query: 664 PRLPTPSHNVQDKLISIMEVAISCLDESPESRP 696
R+ P N + IM C PE RP
Sbjct: 277 GRM-DPPKNCPGPVYRIM---TQCWQHQPEDRP 305
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 10/202 (4%)
Query: 443 CIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFY 501
IGKG V A + +G VA+K + S Q+ EV+ + + H NIVK +
Sbjct: 22 TIGKGNFAKVKLARHILTGREVAIKIIDKTQLNP-TSLQKLFREVRIMKILNHPNIVKLF 80
Query: 502 GFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPP 561
+ +++ EY G + L K+ + + + +V A+ Y H
Sbjct: 81 EVIETEKTLYLIMEYASGGEVFDYLVAHGRMKE---KEARSKFRQIVSAVQYCHQ---KR 134
Query: 562 IVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVT-E 620
IVHRD+ ++N+LLD + ++DFG + G Y APEL K
Sbjct: 135 IVHRDLKAENLLLDADMNIKIADFGFSNEFTV-GGKLDAFCGAPPYAAPELFQGKKYDGP 193
Query: 621 KCDVYSFGVLALEVIKGKHPRD 642
+ DV+S GV+ ++ G P D
Sbjct: 194 EVDVWSLGVILYTLVSGSLPFD 215
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 8/205 (3%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+F IG+G G VYKA +GE+VA+KK +E + E+ L + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 68
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NIVK ++V+E+L + ++ L K + + ++ L++
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 126
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRD+ +N+L++ E ++DFG A+ + T Y APE+
Sbjct: 127 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 183
Query: 615 TMK-VTEKCDVYSFGVLALEVIKGK 638
K + D++S G + E++ +
Sbjct: 184 GCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 10/204 (4%)
Query: 441 EHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVK 499
+ IGKG V A + +G VAVK + S Q+ EV+ + + H NIVK
Sbjct: 20 QKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNP-TSLQKLFREVRIMKILNHPNIVK 78
Query: 500 FYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCF 559
+ + ++V EY G + L K+ + + +V A+ Y H
Sbjct: 79 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF---RQIVSAVQYCHQKY- 134
Query: 560 PPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVT 619
IVHRD+ ++N+LLD + ++DFG + + G+ Y APEL K
Sbjct: 135 --IVHRDLKAENLLLDGDMNIKIADFGFSNEFTV-GNKLDTFCGSPPYAAPELFQGKKYD 191
Query: 620 -EKCDVYSFGVLALEVIKGKHPRD 642
+ DV+S GV+ ++ G P D
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 28/209 (13%)
Query: 444 IGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IG+G G V A ++ VA+KK SP + Q+ L E+K L RH NI+
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLAFRHENIIGIND 90
Query: 503 FC-----SHARHSFIVYEYLEMGSLAMI----LSNDAAAKDLGWTKRMNVIKGVVDALSY 553
+ +IV + +E ++ LSND L +++G L Y
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-----YQILRG----LKY 141
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN---WAELAGTYGYVAP 610
+H+ ++HRD+ N+LL+ ++ + DFG A+ PD + E T Y AP
Sbjct: 142 IHS---ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 611 ELAYTMK-VTEKCDVYSFGVLALEVIKGK 638
E+ K T+ D++S G + E++ +
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 87/200 (43%), Gaps = 11/200 (5%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+GKG G V K + + K + ++ L EV+ L + H NI+K +
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+ +IV E G L K +IK V ++YMH IV
Sbjct: 90 LEDSSSFYIVGELYTGGEL---FDEIIKRKRFSEHDAARIIKQVFSGITYMHK---HNIV 143
Query: 564 HRDISSKNVLLDLEN---EAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTE 620
HRD+ +N+LL+ + + + DFG + + ++ + GT Y+APE+ E
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT-KMKDRIGTAYYIAPEVLRGT-YDE 201
Query: 621 KCDVYSFGVLALEVIKGKHP 640
KCDV+S GV+ ++ G P
Sbjct: 202 KCDVWSAGVILYILLSGTPP 221
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 107/273 (39%), Gaps = 40/273 (14%)
Query: 444 IGKGGQGSVYKAEL------PSGEIVAVKKFHSPLPSEMASQQE--FLNEVKTLTGIRHR 495
+G G G VY+ ++ PS VAVK LP + Q E FL E ++ H+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVYSEQDELDFLMEALIISKFNHQ 108
Query: 496 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILS----NDAAAKDLGWTKRMNVIKGVVDAL 551
NIV+ G + FI+ E + G L L + L ++V + +
Sbjct: 109 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENE---AHVSDFGTAKFLKPDSSNWAELAGT---- 604
Y+ + F +HRDI+++N LL A + DFG A+ + +++ G
Sbjct: 169 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 223
Query: 605 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLD 663
++ PE T K D +SFGVL E+ G P N E+
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP-------YPSKSNQEVLEFVTSG 276
Query: 664 PRLPTPSHNVQDKLISIMEVAISCLDESPESRP 696
R+ P N + IM C PE RP
Sbjct: 277 GRM-DPPKNCPGPVYRIM---TQCWQHQPEDRP 305
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 90/210 (42%), Gaps = 28/210 (13%)
Query: 444 IGKGGQGSVYKAEL------PSGEIVAVKKFHSPLPSEMASQQE--FLNEVKTLTGIRHR 495
+G G G VY+ ++ PS VAVK LP + Q E FL E ++ H+
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 110
Query: 496 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILS----NDAAAKDLGWTKRMNVIKGVVDAL 551
NIV+ G + FI+ E + G L L + L ++V + +
Sbjct: 111 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 170
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENE---AHVSDFGTAKFLKPDSSNWAELAGT---- 604
Y+ + F +HRDI+++N LL A + DFG A+ + +++ G
Sbjct: 171 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 225
Query: 605 YGYVAPELAYTMKVTEKCDVYSFGVLALEV 634
++ PE T K D +SFGVL E+
Sbjct: 226 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 255
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDS--SNWAELAGT 604
+V AL Y+H I+HRD+ +N+LL+ + ++DFGTAK L P+S + GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 605 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
YV+PEL + D+++ G + +++ G P
Sbjct: 198 AQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 119/280 (42%), Gaps = 25/280 (8%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIV----AVKKFHSPLPSEMASQQEFLNEVKTLT 490
+F +G G G+VYK +P GE V A+K+ + + +E L+E +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMA 74
Query: 491 GIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD-LGWTKRMNVIKGVVD 549
+ + ++ + G C + I +++ +L KD +G +N +
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLI----MQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GY 607
++Y+ + +VHRD++++NVL+ ++DFG AK L + + G +
Sbjct: 131 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRL 666
+A E T + DV+S+GV E++ G P D EI+ RL
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-------EISSILEKGERL 240
Query: 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P P D + +++ + D P+ R I + S++ +
Sbjct: 241 PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 280
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWA--ELAGT 604
+V AL Y+H I+HRD+ +N+LL+ + ++DFGTAK L P+S GT
Sbjct: 119 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 175
Query: 605 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
YV+PEL + D+++ G + +++ G P
Sbjct: 176 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 92/218 (42%), Gaps = 20/218 (9%)
Query: 434 VTNDFDDEHCIGKGGQGSVYK-AELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI 492
D D IG+G GSV K PSG+I+AVK+ S + E +Q ++ +
Sbjct: 20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV-DEKEQKQLLMDLDVVMRSS 78
Query: 493 RHRNIVKFYGFCSHARHSFIVYEYLEMG------SLAMILSNDAAAKDLGWTKRMNVIKG 546
IV+FYG +I E + + +L + + LG +
Sbjct: 79 DCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILG-----KITLA 133
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG 606
V AL+++ + I+HRDI N+LLD + DFG + L DS AG
Sbjct: 134 TVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLV-DSIAKTRDAGCRP 190
Query: 607 YVAPEL----AYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y+APE A + DV+S G+ E+ G+ P
Sbjct: 191 YMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 8/205 (3%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+F IG+G G VYKA +GE+VA+KK +E + E+ L + H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 64
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NIVK ++V+E+L + ++ L K + + ++ L++
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIK--SYLFQLLQGLAFC 122
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRD+ +N+L++ E ++DFG A+ + T Y APE+
Sbjct: 123 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 615 TMK-VTEKCDVYSFGVLALEVIKGK 638
K + D++S G + E++ +
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 90/210 (42%), Gaps = 28/210 (13%)
Query: 444 IGKGGQGSVYKAEL------PSGEIVAVKKFHSPLPSEMASQQE--FLNEVKTLTGIRHR 495
+G G G VY+ ++ PS VAVK LP + Q E FL E ++ H+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 94
Query: 496 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILS----NDAAAKDLGWTKRMNVIKGVVDAL 551
NIV+ G + FI+ E + G L L + L ++V + +
Sbjct: 95 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENE---AHVSDFGTAKFLKPDSSNWAELAGT---- 604
Y+ + F +HRDI+++N LL A + DFG A+ + +++ G
Sbjct: 155 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 209
Query: 605 YGYVAPELAYTMKVTEKCDVYSFGVLALEV 634
++ PE T K D +SFGVL E+
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 8/205 (3%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+F IG+G G VYKA +GE+VA+KK +E + E+ L + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 62
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NIVK ++V+E+L + ++ L K + + ++ L++
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 120
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRD+ +N+L++ E ++DFG A+ + T Y APE+
Sbjct: 121 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 177
Query: 615 TMK-VTEKCDVYSFGVLALEVIKGK 638
K + D++S G + E++ +
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDS--SNWAELAGT 604
+V AL Y+H I+HRD+ +N+LL+ + ++DFGTAK L P+S + GT
Sbjct: 142 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 605 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
YV+PEL + D+++ G + +++ G P
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWA--ELAGT 604
+V AL Y+H I+HRD+ +N+LL+ + ++DFGTAK L P+S GT
Sbjct: 117 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 173
Query: 605 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
YV+PEL + D+++ G + +++ G P
Sbjct: 174 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDS--SNWAELAGT 604
+V AL Y+H I+HRD+ +N+LL+ + ++DFGTAK L P+S + GT
Sbjct: 144 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 605 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
YV+PEL + D+++ G + +++ G P
Sbjct: 201 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDS--SNWAELAGT 604
+V AL Y+H I+HRD+ +N+LL+ + ++DFGTAK L P+S + GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 605 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
YV+PEL + D+++ G + +++ G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDS--SNWAELAGT 604
+V AL Y+H I+HRD+ +N+LL+ + ++DFGTAK L P+S + GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 605 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
YV+PEL + D+++ G + +++ G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWA--ELAGT 604
+V AL Y+H I+HRD+ +N+LL+ + ++DFGTAK L P+S GT
Sbjct: 116 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 172
Query: 605 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
YV+PEL + D+++ G + +++ G P
Sbjct: 173 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 90/210 (42%), Gaps = 28/210 (13%)
Query: 444 IGKGGQGSVYKAEL------PSGEIVAVKKFHSPLPSEMASQQE--FLNEVKTLTGIRHR 495
+G G G VY+ ++ PS VAVK LP + Q E FL E ++ H+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 100
Query: 496 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILS----NDAAAKDLGWTKRMNVIKGVVDAL 551
NIV+ G + FI+ E + G L L + L ++V + +
Sbjct: 101 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 160
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENE---AHVSDFGTAKFLKPDSSNWAELAGT---- 604
Y+ + F +HRDI+++N LL A + DFG A+ + +++ G
Sbjct: 161 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 215
Query: 605 YGYVAPELAYTMKVTEKCDVYSFGVLALEV 634
++ PE T K D +SFGVL E+
Sbjct: 216 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 245
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDS--SNWAELAGT 604
+V AL Y+H I+HRD+ +N+LL+ + ++DFGTAK L P+S + GT
Sbjct: 142 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 605 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
YV+PEL + D+++ G + +++ G P
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDS--SNWAELAGT 604
+V AL Y+H I+HRD+ +N+LL+ + ++DFGTAK L P+S + GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 605 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
YV+PEL + D+++ G + +++ G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWA--ELAGT 604
+V AL Y+H I+HRD+ +N+LL+ + ++DFGTAK L P+S GT
Sbjct: 118 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 174
Query: 605 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
YV+PEL + D+++ G + +++ G P
Sbjct: 175 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDS--SNWAELAGT 604
+V AL Y+H I+HRD+ +N+LL+ + ++DFGTAK L P+S + GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 605 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
YV+PEL + D+++ G + +++ G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDS--SNWAELAGT 604
+V AL Y+H I+HRD+ +N+LL+ + ++DFGTAK L P+S + GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 605 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
YV+PEL + D+++ G + +++ G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDS--SNWAELAGT 604
+V AL Y+H I+HRD+ +N+LL+ + ++DFGTAK L P+S + GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 605 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
YV+PEL + D+++ G + +++ G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDS--SNWAELAGT 604
+V AL Y+H I+HRD+ +N+LL+ + ++DFGTAK L P+S + GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 605 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
YV+PEL + D+++ G + +++ G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 119/280 (42%), Gaps = 25/280 (8%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIV----AVKKFHSPLPSEMASQQEFLNEVKTLT 490
+F +G G G+VYK +P GE V A+K+ + + +E L+E +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMA 72
Query: 491 GIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD-LGWTKRMNVIKGVVD 549
+ + ++ + G C + I +++ +L KD +G +N +
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLI----MQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GY 607
++Y+ + +VHRD++++NVL+ ++DFG AK L + + G +
Sbjct: 129 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRL 666
+A E T + DV+S+GV E++ G P D EI+ RL
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-------EISSILEKGERL 238
Query: 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P P D + +++ + D P+ R I + S++ +
Sbjct: 239 PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 94 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 149
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 150 DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 206
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 207 QTVDIWSVGCIMAELLTGR 225
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 8/205 (3%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+F IG+G G VYKA +GE+VA+KK +E + E+ L + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 61
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NIVK ++V+E+L + ++ L K + + ++ L++
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 119
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRD+ +N+L++ E ++DFG A+ + T Y APE+
Sbjct: 120 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 615 TMK-VTEKCDVYSFGVLALEVIKGK 638
K + D++S G + E++ +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 8/205 (3%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+F IG+G G VYKA +GE+VA+KK +E + E+ L + H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 65
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NIVK ++V+E+L + ++ L K + + ++ L++
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 123
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRD+ +N+L++ E ++DFG A+ + T Y APE+
Sbjct: 124 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 180
Query: 615 TMK-VTEKCDVYSFGVLALEVIKGK 638
K + D++S G + E++ +
Sbjct: 181 GCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 119/280 (42%), Gaps = 25/280 (8%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIV----AVKKFHSPLPSEMASQQEFLNEVKTLT 490
+F +G G G+VYK +P GE V A+K+ + + +E L+E +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMA 74
Query: 491 GIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD-LGWTKRMNVIKGVVD 549
+ + ++ + G C + I +++ +L KD +G +N +
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLI----MQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GY 607
++Y+ + +VHRD++++NVL+ ++DFG AK L + + G +
Sbjct: 131 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 187
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRL 666
+A E T + DV+S+GV E++ G P D EI+ RL
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-------EISSILEKGERL 240
Query: 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P P D + +++ + D P+ R I + S++ +
Sbjct: 241 PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 280
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 94 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 149
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 150 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 206
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 207 QTVDIWSVGCIMAELLTGR 225
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 119/280 (42%), Gaps = 25/280 (8%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIV----AVKKFHSPLPSEMASQQEFLNEVKTLT 490
+F +G G G+VYK +P GE V A+K+ + + +E L+E +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMA 76
Query: 491 GIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD-LGWTKRMNVIKGVVD 549
+ + ++ + G C + I +++ +L KD +G +N +
Sbjct: 77 SVDNPHVCRLLGICLTSTVQLI----MQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 132
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GY 607
++Y+ + +VHRD++++NVL+ ++DFG AK L + + G +
Sbjct: 133 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 189
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRL 666
+A E T + DV+S+GV E++ G P D EI+ RL
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-------EISSILEKGERL 242
Query: 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P P D + +++ + D P+ R I + S++ +
Sbjct: 243 PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 282
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 102/222 (45%), Gaps = 12/222 (5%)
Query: 421 SFEGKIVYEEIIRVTNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQ 479
+F + + + I V + + +G G GSV A + +G VAVKK P S + ++
Sbjct: 3 TFYRQELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 62
Query: 480 QEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGW 537
+ + E++ L ++H N++ + AR S + YL + L+N L
Sbjct: 63 RTY-RELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCAKLTD 120
Query: 538 TKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN 597
+I ++ L Y+H+ I+HRD+ N+ ++ + E + DFG A+ + +
Sbjct: 121 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 177
Query: 598 WAELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGK 638
+ T Y APE+ M + D++S G + E++ G+
Sbjct: 178 Y---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 8/205 (3%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+F IG+G G VYKA +GE+VA+KK +E + E+ L + H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 65
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NIVK ++V+E+L + ++ L K + + ++ L++
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 123
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRD+ +N+L++ E ++DFG A+ + T Y APE+
Sbjct: 124 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 180
Query: 615 TMK-VTEKCDVYSFGVLALEVIKGK 638
K + D++S G + E++ +
Sbjct: 181 GCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 435 TNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR 493
++ F +G G +VYK +G VA+K+ L SE + + E+ + ++
Sbjct: 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVK--LDSEEGTPSTAIREISLMKELK 61
Query: 494 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKR---MNVIK----G 546
H NIV+ Y +V+E+++ L ++ +G T R +N++K
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDND-----LKKYMDSRTVGNTPRGLELNLVKYFQWQ 116
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG 606
++ L++ H + I+HRD+ +N+L++ + + DFG A+ + ++ T
Sbjct: 117 LLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLW 173
Query: 607 YVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGK 638
Y AP+ L + + D++S G + E+I GK
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 8/205 (3%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+F IG+G G VYKA +GE+VA+KK +E + E+ L + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 61
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NIVK ++V+E+L + ++ L K + + ++ L++
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 119
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRD+ +N+L++ E ++DFG A+ + T Y APE+
Sbjct: 120 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 615 TMK-VTEKCDVYSFGVLALEVIKGK 638
K + D++S G + E++ +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDS--SNWAELAGT 604
+V AL Y+H I+HRD+ +N+LL+ + ++DFGTAK L P+S + GT
Sbjct: 146 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 202
Query: 605 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
YV+PEL + D+++ G + +++ G P
Sbjct: 203 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 89/210 (42%), Gaps = 28/210 (13%)
Query: 444 IGKGGQGSVYKAEL------PSGEIVAVKKFHSPLPSEMASQQE--FLNEVKTLTGIRHR 495
+G G G VY+ ++ PS VAVK LP + Q E FL E ++ H+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 134
Query: 496 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILS----NDAAAKDLGWTKRMNVIKGVVDAL 551
NIV+ G + FI+ E + G L L + L ++V + +
Sbjct: 135 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 194
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENE---AHVSDFGTAKFLKPDSSNWAELAGT---- 604
Y+ + F +HRDI+++N LL A + DFG A+ + + + G
Sbjct: 195 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RAGYYRKGGCAMLP 249
Query: 605 YGYVAPELAYTMKVTEKCDVYSFGVLALEV 634
++ PE T K D +SFGVL E+
Sbjct: 250 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 279
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 8/205 (3%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+F IG+G G VYKA +GE+VA+KK +E + E+ L + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 60
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NIVK ++V+E+L + ++ L K + + ++ L++
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRD+ +N+L++ E ++DFG A+ + T Y APE+
Sbjct: 119 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 615 TMK-VTEKCDVYSFGVLALEVIKGK 638
K + D++S G + E++ +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 8/205 (3%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+F IG+G G VYKA +GE+VA+KK +E + E+ L + H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 64
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NIVK ++V+E+L + ++ L K + + ++ L++
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 122
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRD+ +N+L++ E ++DFG A+ + T Y APE+
Sbjct: 123 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 615 TMK-VTEKCDVYSFGVLALEVIKGK 638
K + D++S G + E++ +
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 8/205 (3%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+F IG+G G VYKA +GE+VA+KK +E + E+ L + H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 63
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NIVK ++V+E+L + ++ L K + + ++ L++
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 121
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRD+ +N+L++ E ++DFG A+ + T Y APE+
Sbjct: 122 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 615 TMK-VTEKCDVYSFGVLALEVIKGK 638
K + D++S G + E++ +
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDS--SNWAELAGT 604
+V AL Y+H I+HRD+ +N+LL+ + ++DFGTAK L P+S + GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
Query: 605 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
YV+PEL + D+++ G + +++ G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 119/280 (42%), Gaps = 25/280 (8%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIV----AVKKFHSPLPSEMASQQEFLNEVKTLT 490
+F +G G G+VYK +P GE V A+K+ + + +E L+E +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMA 75
Query: 491 GIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD-LGWTKRMNVIKGVVD 549
+ + ++ + G C + I +++ +L KD +G +N +
Sbjct: 76 SVDNPHVCRLLGICLTSTVQLI----MQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GY 607
++Y+ + +VHRD++++NVL+ ++DFG AK L + + G +
Sbjct: 132 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRL 666
+A E T + DV+S+GV E++ G P D EI+ RL
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-------EISSILEKGERL 241
Query: 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P P D + +++ + D P+ R I + S++ +
Sbjct: 242 PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 281
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 89 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 145 DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 201
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 119/280 (42%), Gaps = 25/280 (8%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIV----AVKKFHSPLPSEMASQQEFLNEVKTLT 490
+F +G G G+VYK +P GE V A+K+ + + +E L+E +
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMA 69
Query: 491 GIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD-LGWTKRMNVIKGVVD 549
+ + ++ + G C + I ++ +L KD +G +N + +
Sbjct: 70 SVDNPHVCRLLGICLTSTVQLIT----QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAE 125
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GY 607
++Y+ + +VHRD++++NVL+ ++DFG AK L + + G +
Sbjct: 126 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 182
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRL 666
+A E T + DV+S+GV E++ G P D EI+ RL
Sbjct: 183 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-------EISSILEKGERL 235
Query: 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P P D + +++ + D P+ R I + S++ +
Sbjct: 236 PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 275
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 119/280 (42%), Gaps = 25/280 (8%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIV----AVKKFHSPLPSEMASQQEFLNEVKTLT 490
+F +G G G+VYK +P GE V A+K+ + + +E L+E +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMA 76
Query: 491 GIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD-LGWTKRMNVIKGVVD 549
+ + ++ + G C + I +++ +L KD +G +N +
Sbjct: 77 SVDNPHVCRLLGICLTSTVQLI----MQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 132
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GY 607
++Y+ + +VHRD++++NVL+ ++DFG AK L + + G +
Sbjct: 133 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 189
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRL 666
+A E T + DV+S+GV E++ G P D EI+ RL
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-------EISSILEKGERL 242
Query: 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P P D + +++ + D P+ R I + S++ +
Sbjct: 243 PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 282
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 99
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 100 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 155
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 156 DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 212
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 213 QTVDIWSVGCIMAELLTGR 231
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 8/205 (3%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+F IG+G G VYKA +GE+VA+KK +E + E+ L + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 60
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NIVK ++V+E+L + ++ L K + + ++ L++
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRD+ +N+L++ E ++DFG A+ + T Y APE+
Sbjct: 119 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 615 TMK-VTEKCDVYSFGVLALEVIKGK 638
K + D++S G + E++ +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 89 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY-TMKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNAMHYN 201
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 27/232 (11%)
Query: 417 LSVLSFEGKIVYEEIIRVTNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEM 476
+ VL+ +GK + I TN IG G G V++A+L + VA+KK +
Sbjct: 25 IKVLASDGKTGEQREIAYTNC----KVIGNGSFGVVFQAKLVESDEVAIKK--------V 72
Query: 477 ASQQEFLN-EVKTLTGIRHRNIVKFYGFC---SHARHSFIVYEYLEMGSLAMILSNDAAA 532
+ F N E++ + ++H N+V F + + LE + ++ A
Sbjct: 73 LQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYA 132
Query: 533 KDLGWTKRMNVIK----GVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEA-HVSDFGT 587
K L T M +IK ++ +L+Y+H+ I HRDI +N+LLD + + DFG+
Sbjct: 133 K-LKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGS 188
Query: 588 AKFLKPDSSNWAELAGTYGYVAPELAY-TMKVTEKCDVYSFGVLALEVIKGK 638
AK L N + + Y Y APEL + T D++S G + E+++G+
Sbjct: 189 AKILIAGEPNVSXICSRY-YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDS--SNWAELAGT 604
+V AL Y+H I+HRD+ +N+LL+ + ++DFGTAK L P+S + GT
Sbjct: 138 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194
Query: 605 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
YV+PEL + D+++ G + +++ G P
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 8/205 (3%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+F IG+G G VYKA +GE+VA+KK +E + E+ L + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 60
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NIVK ++V+E+L + ++ L K + + ++ L++
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRD+ +N+L++ E ++DFG A+ + T Y APE+
Sbjct: 119 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 175
Query: 615 TMK-VTEKCDVYSFGVLALEVIKGK 638
K + D++S G + E++ +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 119/280 (42%), Gaps = 25/280 (8%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIV----AVKKFHSPLPSEMASQQEFLNEVKTLT 490
+F +G G G+VYK +P GE V A+K+ + + +E L+E +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMA 73
Query: 491 GIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD-LGWTKRMNVIKGVVD 549
+ + ++ + G C + I +++ +L KD +G +N +
Sbjct: 74 SVDNPHVCRLLGICLTSTVQLI----MQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAK 129
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GY 607
++Y+ + +VHRD++++NVL+ ++DFG AK L + + G +
Sbjct: 130 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 186
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRL 666
+A E T + DV+S+GV E++ G P D EI+ RL
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-------EISSILEKGERL 239
Query: 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P P D + +++ + D P+ R I + S++ +
Sbjct: 240 PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 279
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 89 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 201
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 8/205 (3%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+F IG+G G VYKA +GE+VA+KK +E + E+ L + H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 64
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NIVK ++V+E+L + ++ L K + + ++ L++
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 122
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRD+ +N+L++ E ++DFG A+ + T Y APE+
Sbjct: 123 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 615 TMK-VTEKCDVYSFGVLALEVIKGK 638
K + D++S G + E++ +
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 8/205 (3%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+F IG+G G VYKA +GE+VA+KK +E + E+ L + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 61
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NIVK ++V+E+L + ++ L K + + ++ L++
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 119
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRD+ +N+L++ E ++DFG A+ + T Y APE+
Sbjct: 120 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 615 TMK-VTEKCDVYSFGVLALEVIKGK 638
K + D++S G + E++ +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 90/210 (42%), Gaps = 28/210 (13%)
Query: 444 IGKGGQGSVYKAEL------PSGEIVAVKKFHSPLPSEMASQQE--FLNEVKTLTGIRHR 495
+G G G VY+ ++ PS VAVK LP + Q E FL E ++ H+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 120
Query: 496 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILS----NDAAAKDLGWTKRMNVIKGVVDAL 551
NIV+ G + FI+ E + G L L + L ++V + +
Sbjct: 121 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 180
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENE---AHVSDFGTAKFLKPDSSNWAELAGT---- 604
Y+ + F +HRDI+++N LL A + DFG A+ + +++ G
Sbjct: 181 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 235
Query: 605 YGYVAPELAYTMKVTEKCDVYSFGVLALEV 634
++ PE T K D +SFGVL E+
Sbjct: 236 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 265
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 119/280 (42%), Gaps = 25/280 (8%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIV----AVKKFHSPLPSEMASQQEFLNEVKTLT 490
+F +G G G+VYK +P GE V A+K+ + + +E L+E +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMA 73
Query: 491 GIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD-LGWTKRMNVIKGVVD 549
+ + ++ + G C + I +++ +L KD +G +N +
Sbjct: 74 SVDNPHVCRLLGICLTSTVQLI----MQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 129
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GY 607
++Y+ + +VHRD++++NVL+ ++DFG AK L + + G +
Sbjct: 130 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 186
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRL 666
+A E T + DV+S+GV E++ G P D EI+ RL
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-------EISSILEKGERL 239
Query: 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P P D + +++ + D P+ R I + S++ +
Sbjct: 240 PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 279
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 91 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 146
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 147 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 203
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 204 QTVDIWSVGCIMAELLTGR 222
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDS--SNWAELAGT 604
+V AL Y+H I+HRD+ +N+LL+ + ++DFGTAK L P+S + GT
Sbjct: 138 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194
Query: 605 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
YV+PEL + D+++ G + +++ G P
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 89/210 (42%), Gaps = 28/210 (13%)
Query: 444 IGKGGQGSVYKAEL------PSGEIVAVKKFHSPLPSEMASQQE--FLNEVKTLTGIRHR 495
+G G G VY+ ++ PS VAVK LP + Q E FL E ++ H+
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 111
Query: 496 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILS----NDAAAKDLGWTKRMNVIKGVVDAL 551
NIV+ G + FI+ E + G L L + L ++V + +
Sbjct: 112 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 171
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENE---AHVSDFGTAKFLKPDSSNWAELAGT---- 604
Y+ + F +HRDI+++N LL A + DFG A+ + + + G
Sbjct: 172 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RAGYYRKGGCAMLP 226
Query: 605 YGYVAPELAYTMKVTEKCDVYSFGVLALEV 634
++ PE T K D +SFGVL E+
Sbjct: 227 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 256
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 37/230 (16%)
Query: 425 KIVYEEIIRVTNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKK---FHSPLPSEMASQQ 480
+IVY +++DF + +G+G G V A P+GEIVA+KK F PL +
Sbjct: 4 RIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT--- 56
Query: 481 EFLNEVKTLTGIRHRNIVKFYGF-----CSHARHSFIVYEYLEMGSLAMILSNDAAAKDL 535
L E+K L +H NI+ + + +I+ E ++ L ++S + D
Sbjct: 57 --LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQMLSDD- 112
Query: 536 GWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDS 595
I + A+ +H ++HRD+ N+L++ + V DFG A+ + +
Sbjct: 113 ---HIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166
Query: 596 ----------SNWAELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEV 634
S E T Y APE+ T K + DV+S G + E+
Sbjct: 167 ADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 8/205 (3%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+F IG+G G VYKA +GE+VA+KK +E + E+ L + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 62
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NIVK ++V+E+L + ++ L K + + ++ L++
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 120
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRD+ +N+L++ E ++DFG A+ + T Y APE+
Sbjct: 121 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 615 TMK-VTEKCDVYSFGVLALEVIKGK 638
K + D++S G + E++ +
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 95 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 150
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 151 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 207
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 208 QTVDIWSVGCIMAELLTGR 226
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 108
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 109 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 164
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 165 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 221
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 222 QTVDIWSVGCIMAELLTGR 240
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 37/230 (16%)
Query: 425 KIVYEEIIRVTNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKK---FHSPLPSEMASQQ 480
+IVY +++DF + +G+G G V A P+GEIVA+KK F PL +
Sbjct: 4 RIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT--- 56
Query: 481 EFLNEVKTLTGIRHRNIVKFYGF-----CSHARHSFIVYEYLEMGSLAMILSNDAAAKDL 535
L E+K L +H NI+ + + +I+ E ++ L ++S + D
Sbjct: 57 --LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQMLSDD- 112
Query: 536 GWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDS 595
I + A+ +H ++HRD+ N+L++ + V DFG A+ + +
Sbjct: 113 ---HIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166
Query: 596 SNWAELAG----------TYGYVAPELAYT-MKVTEKCDVYSFGVLALEV 634
++ +E G T Y APE+ T K + DV+S G + E+
Sbjct: 167 ADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 91 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 146
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 147 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 203
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 204 QTVDIWSVGCIMAELLTGR 222
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDS--SNWAELAGT 604
+V AL Y+H I+HRD+ +N+LL+ + ++DFGTAK L P+S + GT
Sbjct: 123 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179
Query: 605 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
YV+PEL + D+++ G + +++ G P
Sbjct: 180 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 89 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 201
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 89 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 201
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 8/207 (3%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR- 493
++F+ +GKG G V A + +G++ AVK + + + + E + L+ R
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 494 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSY 553
H + + + F V E++ G L + ++ + ++ AL +
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQK---SRRFDEARARFYAAEIISALMF 139
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELA 613
+H+ I++RD+ NVLLD E ++DFG K + A GT Y+APE+
Sbjct: 140 LHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEIL 196
Query: 614 YTMKVTEKCDVYSFGVLALEVIKGKHP 640
M D ++ GVL E++ G P
Sbjct: 197 QEMLYGPAVDWWAMGVLLYEMLCGHAP 223
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 89 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 201
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 111
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 112 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 167
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 168 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 224
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 225 QTVDIWSVGCIMAELLTGR 243
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 89 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 201
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 90/210 (42%), Gaps = 28/210 (13%)
Query: 444 IGKGGQGSVYKAEL------PSGEIVAVKKFHSPLPSEMASQQE--FLNEVKTLTGIRHR 495
+G G G VY+ ++ PS VAVK LP + Q E FL E ++ H+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 94
Query: 496 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSND----AAAKDLGWTKRMNVIKGVVDAL 551
NIV+ G + FI+ E + G L L + L ++V + +
Sbjct: 95 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENE---AHVSDFGTAKFLKPDSSNWAELAGT---- 604
Y+ + F +HRDI+++N LL A + DFG A+ + +++ G
Sbjct: 155 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIY--RASYYRKGGCAMLP 209
Query: 605 YGYVAPELAYTMKVTEKCDVYSFGVLALEV 634
++ PE T K D +SFGVL E+
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 91 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 146
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 147 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 203
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 204 QTVDIWSVGCIMAELLTGR 222
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 107
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 108 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 163
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 164 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 220
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 221 QTVDIWSVGCIMAELLTGR 239
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 89 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 201
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 94 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 149
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 150 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 206
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 207 QTVDIWSVGCIMAELLTGR 225
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 85
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 86 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 141
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 142 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 198
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 199 QTVDIWSVGCIMAELLTGR 217
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 103/222 (46%), Gaps = 12/222 (5%)
Query: 421 SFEGKIVYEEIIRVTNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQ 479
+F + + + I V + + +G G GSV A + +G VAVKK P S + ++
Sbjct: 5 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 64
Query: 480 QEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGW 537
+ + E++ L ++H N++ + AR S + YL + L+N + L
Sbjct: 65 RTY-RELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 122
Query: 538 TKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN 597
+I ++ L Y+H+ I+HRD+ N+ ++ + E + DFG A+ + +
Sbjct: 123 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 179
Query: 598 WAELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGK 638
+ T Y APE+ M + D++S G + E++ G+
Sbjct: 180 Y---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 87
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 88 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 143
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 144 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 200
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 201 QTVDIWSVGCIMAELLTGR 219
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 89 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 201
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 8/205 (3%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+F IG+G G VYKA +GE+VA+KK +E + E+ L + H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 63
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NIVK ++V+E+L + ++ L K + + ++ L++
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 121
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRD+ +N+L++ E ++DFG A+ + T Y APE+
Sbjct: 122 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 615 TMK-VTEKCDVYSFGVLALEVIKGK 638
K + D++S G + E++ +
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 95 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 150
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 151 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 207
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 208 QTVDIWSVGCIMAELLTGR 226
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 37/230 (16%)
Query: 425 KIVYEEIIRVTNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKK---FHSPLPSEMASQQ 480
+IVY +++DF + +G+G G V A P+GEIVA+KK F PL +
Sbjct: 4 RIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT--- 56
Query: 481 EFLNEVKTLTGIRHRNIVKFYGF-----CSHARHSFIVYEYLEMGSLAMILSNDAAAKDL 535
L E+K L +H NI+ + + +I+ E ++ L ++S + D
Sbjct: 57 --LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQMLSDD- 112
Query: 536 GWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDS 595
I + A+ +H ++HRD+ N+L++ + V DFG A+ + +
Sbjct: 113 ---HIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166
Query: 596 SNWAELAG----------TYGYVAPELAYT-MKVTEKCDVYSFGVLALEV 634
++ +E G T Y APE+ T K + DV+S G + E+
Sbjct: 167 ADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 87/206 (42%), Gaps = 8/206 (3%)
Query: 437 DFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLT-GIRH 494
DF +GKG G V+ AE + + A+K + + + E + L+ H
Sbjct: 18 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 77
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+ + + F V EYL G L + + + ++ ++ L ++
Sbjct: 78 PFLTHMFCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAEIILGLQFL 134
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ IV+RD+ N+LLD + ++DFG K + GT Y+APE+
Sbjct: 135 HSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILL 191
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
K D +SFGVL E++ G+ P
Sbjct: 192 GQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 100
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 101 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 156
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 157 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 213
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 214 QTVDIWSVGCIMAELLTGR 232
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 85
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 86 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 141
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 142 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 198
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 199 QTVDIWSVGCIMAELLTGR 217
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 28/209 (13%)
Query: 444 IGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IG+G G V A ++ VA+KK SP + Q+ L E+K L RH NI+
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLAFRHENIIGIND 90
Query: 503 FC-----SHARHSFIVYEYLEMGSLAMI----LSNDAAAKDLGWTKRMNVIKGVVDALSY 553
+ +IV + +E ++ LSND L +++G L Y
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-----YQILRG----LKY 141
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN---WAELAGTYGYVAP 610
+H+ ++HRD+ N+LL+ + + DFG A+ PD + E T Y AP
Sbjct: 142 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 611 ELAYTMK-VTEKCDVYSFGVLALEVIKGK 638
E+ K T+ D++S G + E++ +
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 8/205 (3%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+F IG+G G VYKA +GE+VA+KK +E + E+ L + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 61
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NIVK ++V+E+L + ++ L K + + ++ L++
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 119
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRD+ +N+L++ E ++DFG A+ + T Y APE+
Sbjct: 120 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 615 TMK-VTEKCDVYSFGVLALEVIKGK 638
K + D++S G + E++ +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 96 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 151
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGY---VATRWYRAPEIMLNWMHYN 208
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 209 QTVDIWSVGCIMAELLTGR 227
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 100
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 101 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 156
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 157 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 213
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 214 QTVDIWSVGCIMAELLTGR 232
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 84
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 85 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 140
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 197
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 198 QTVDIWSVGCIMAELLTGR 216
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 96 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 151
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 208
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 209 QTVDIWSVGCIMAELLTGR 227
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 100
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 101 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 156
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 157 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 213
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 214 QTVDIWSVGCIMAELLTGR 232
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 87/200 (43%), Gaps = 11/200 (5%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+GKG G V K + + K + ++ L EV+ L + H NI+K +
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+ +IV E G L K +IK V ++YMH IV
Sbjct: 90 LEDSSSFYIVGELYTGGEL---FDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIV 143
Query: 564 HRDISSKNVLLDLEN---EAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTE 620
HRD+ +N+LL+ + + + DFG + + ++ + GT Y+APE+ E
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT-KMKDRIGTAYYIAPEVLRGT-YDE 201
Query: 621 KCDVYSFGVLALEVIKGKHP 640
KCDV+S GV+ ++ G P
Sbjct: 202 KCDVWSAGVILYILLSGTPP 221
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 8/205 (3%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+F IG+G G VYKA +GE+VA+KK +E + E+ L + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 61
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NIVK ++V+E+L + ++ L K + + ++ L++
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 119
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRD+ +N+L++ E ++DFG A+ + T Y APE+
Sbjct: 120 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 615 TMK-VTEKCDVYSFGVLALEVIKGK 638
K + D++S G + E++ +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 8/205 (3%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+F IG+G G VYKA +GE+VA+KK +E + E+ L + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 62
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NIVK ++V+E+L + ++ L K + + ++ L++
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 120
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRD+ +N+L++ E ++DFG A+ + T Y APE+
Sbjct: 121 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 615 TMK-VTEKCDVYSFGVLALEVIKGK 638
K + D++S G + E++ +
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 8/205 (3%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+F IG+G G VYKA +GE+VA+KK +E + E+ L + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 61
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NIVK ++V+E+L + ++ L K + + ++ L++
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 119
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRD+ +N+L++ E ++DFG A+ + T Y APE+
Sbjct: 120 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 615 TMK-VTEKCDVYSFGVLALEVIKGK 638
K + D++S G + E++ +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 99
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 100 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 155
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 156 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 212
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 213 QTVDIWSVGCIMAELLTGR 231
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 87/200 (43%), Gaps = 11/200 (5%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+GKG G V K + + K + ++ L EV+ L + H NI+K +
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+ +IV E G L K +IK V ++YMH IV
Sbjct: 90 LEDSSSFYIVGELYTGGEL---FDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIV 143
Query: 564 HRDISSKNVLLDLEN---EAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTE 620
HRD+ +N+LL+ + + + DFG + + ++ + GT Y+APE+ E
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT-KMKDRIGTAYYIAPEVLRGT-YDE 201
Query: 621 KCDVYSFGVLALEVIKGKHP 640
KCDV+S GV+ ++ G P
Sbjct: 202 KCDVWSAGVILYILLSGTPP 221
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 28/232 (12%)
Query: 423 EGKIVYEEIIRVTNDFDDE-HC------IGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPS 474
EG ++ E++ V ++ +E H +G+G G V++ E +G AVKK
Sbjct: 54 EGVLLTEKLKPVDYEYREEVHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRL---- 109
Query: 475 EMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD 534
E+ +E + G+ IV YG I E LE GSL ++ +
Sbjct: 110 EVFRAEELM----ACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPE 165
Query: 535 LGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLE-NEAHVSDFGTAKFLKP 593
+ + + ++ L Y+H+ I+H D+ + NVLL + + A + DFG A L+P
Sbjct: 166 ---DRALYYLGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQP 219
Query: 594 DSSNWAELAGTY-----GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
D L G Y ++APE+ K DV+S + L ++ G HP
Sbjct: 220 DGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 28/209 (13%)
Query: 444 IGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IG+G G V A ++ VA+KK SP + Q+ L E+K L RH NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 88
Query: 503 FC-----SHARHSFIVYEYLEMGSLAMI----LSNDAAAKDLGWTKRMNVIKGVVDALSY 553
+ +IV + +E ++ LSND L +++G L Y
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-----YQILRG----LKY 139
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN---WAELAGTYGYVAP 610
+H+ ++HRD+ N+LL+ + + DFG A+ PD + E T Y AP
Sbjct: 140 IHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 611 ELAYTMK-VTEKCDVYSFGVLALEVIKGK 638
E+ K T+ D++S G + E++ +
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 96 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 151
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGY---VATRWYRAPEIMLNWMHYN 208
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 209 QTVDIWSVGCIMAELLTGR 227
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 8/205 (3%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+F IG+G G VYKA +GE+VA+KK +E + E+ L + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 60
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NIVK ++V+E+L + ++ L K + + ++ L++
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRD+ +N+L++ E ++DFG A+ + T Y APE+
Sbjct: 119 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 175
Query: 615 TMK-VTEKCDVYSFGVLALEVIKGK 638
K + D++S G + E++ +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 96 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 151
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGY---VATRWYRAPEIMLNWMHYN 208
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 209 QTVDIWSVGCIMAELLTGR 227
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N ++ L +I ++ L Y+H+
Sbjct: 89 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ ++E + DFG + + + + T Y APE+ M
Sbjct: 145 DIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGY---VATRWYRAPEIMLNWMHYN 201
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 89 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 201
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 8/205 (3%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+F IG+G G VYKA +GE+VA+KK +E + E+ L + H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 63
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NIVK ++V+E+L + ++ L K + + ++ L++
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 121
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRD+ +N+L++ E ++DFG A+ + T Y APE+
Sbjct: 122 HSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 615 TMK-VTEKCDVYSFGVLALEVIKGK 638
K + D++S G + E++ +
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 93/196 (47%), Gaps = 10/196 (5%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMAS--QQEFLNEVKTLTGIRHRNIVKF 500
+G+G +VYKA + + +IVA+KK SE + L E+K L + H NI+
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 501 YGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
H + +V++++E L +I+ +++ K ++ + L Y+H
Sbjct: 78 LDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLM--TLQGLEYLHQHW-- 132
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTE 620
I+HRD+ N+LLD ++DFG AK + + T Y APEL + ++
Sbjct: 133 -ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYG 191
Query: 621 -KCDVYSFGVLALEVI 635
D+++ G + E++
Sbjct: 192 VGVDMWAVGCILAELL 207
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 118/280 (42%), Gaps = 25/280 (8%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIV----AVKKFHSPLPSEMASQQEFLNEVKTLT 490
+F +G G G+VYK +P GE V A+K+ + + +E L+E +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMA 72
Query: 491 GIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD-LGWTKRMNVIKGVVD 549
+ + ++ + G C + I ++ +L KD +G +N +
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLIT----QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GY 607
++Y+ + +VHRD++++NVL+ ++DFG AK L + + G +
Sbjct: 129 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 185
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRL 666
+A E T + DV+S+GV E++ G P D EI+ RL
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-------EISSILEKGERL 238
Query: 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P P D + +++ + D P+ R I + S++ +
Sbjct: 239 PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 97/229 (42%), Gaps = 26/229 (11%)
Query: 428 YEEIIRV-------TNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQ 480
YE+I++ D+D IG+G G V + + V K S S
Sbjct: 60 YEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDS 119
Query: 481 EFLNEVKTLTGIRHRN-IVKFYGFCSHARHSFIVYEYLEMGSLAMILSN-DAAAKDLGWT 538
F E + + + +V+ + ++ ++V EY+ G L ++SN D K W
Sbjct: 120 AFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEK---WA 176
Query: 539 KRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNW 598
K VV AL +H+ ++HRD+ N+LLD ++DFGT +K D +
Sbjct: 177 KFYTA--EVVLALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTC--MKMDETGM 229
Query: 599 AEL---AGTYGYVAPELAYTMK----VTEKCDVYSFGVLALEVIKGKHP 640
GT Y++PE+ + +CD +S GV E++ G P
Sbjct: 230 VHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 118/280 (42%), Gaps = 25/280 (8%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIV----AVKKFHSPLPSEMASQQEFLNEVKTLT 490
+F +G G G+VYK +P GE V A+K+ + + +E L+E +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMA 74
Query: 491 GIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD-LGWTKRMNVIKGVVD 549
+ + ++ + G C + I +++ +L KD +G +N +
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLI----MQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GY 607
++Y+ + +VHRD++++NVL+ ++DFG AK L + + G +
Sbjct: 131 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRL 666
+A E T + DV+S+GV E++ G P D EI+ RL
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-------EISSILEKGERL 240
Query: 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P P D + + + + D P+ R I + S++ +
Sbjct: 241 PQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 280
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 118/280 (42%), Gaps = 25/280 (8%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIV----AVKKFHSPLPSEMASQQEFLNEVKTLT 490
+F +G G G+VYK +P GE V A+K+ + + +E L+E +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMA 79
Query: 491 GIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD-LGWTKRMNVIKGVVD 549
+ + ++ + G C + I ++ +L KD +G +N +
Sbjct: 80 SVDNPHVCRLLGICLTSTVQLIT----QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 135
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GY 607
++Y+ + +VHRD++++NVL+ ++DFG AK L + + G +
Sbjct: 136 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 192
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRL 666
+A E T + DV+S+GV E++ G P D EI+ RL
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-------EISSILEKGERL 245
Query: 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P P D + +++ + D P+ R I + S++ +
Sbjct: 246 PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 285
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 95/201 (47%), Gaps = 17/201 (8%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + SGE VA+KK P SE+ +++ + E+ L ++H N++
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAY-RELLLLKHMQHENVIGLLD 90
Query: 503 FCSHARHSFIVYE-YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPP 561
+ A Y+ YL M + L K K ++ ++ L Y+H+
Sbjct: 91 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGLK-FSEEKIQYLVYQMLKGLKYIHSAG--- 146
Query: 562 IVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG---TYGYVAPELAYT-MK 617
+VHRD+ N+ ++ + E + DFG A+ AE+ G T Y APE+ + M
Sbjct: 147 VVHRDLKPGNLAVNEDCELKILDFGLARHAD------AEMTGYVVTRWYRAPEVILSWMH 200
Query: 618 VTEKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ GK
Sbjct: 201 YNQTVDIWSVGCIMAEMLTGK 221
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 118/280 (42%), Gaps = 25/280 (8%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIV----AVKKFHSPLPSEMASQQEFLNEVKTLT 490
+F +G G G+VYK +P GE V A+K+ + + +E L+E +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMA 74
Query: 491 GIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD-LGWTKRMNVIKGVVD 549
+ + ++ + G C + I ++ +L KD +G +N +
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLIT----QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GY 607
++Y+ + +VHRD++++NVL+ ++DFG AK L + + G +
Sbjct: 131 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 187
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRL 666
+A E T + DV+S+GV E++ G P D EI+ RL
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-------EISSILEKGERL 240
Query: 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P P D + +++ + D P+ R I + S++ +
Sbjct: 241 PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 280
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 28/209 (13%)
Query: 444 IGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IG+G G V A ++ VA+KK SP + Q+ L E+K L RH NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 88
Query: 503 FC-----SHARHSFIVYEYLEMGSLAMI----LSNDAAAKDLGWTKRMNVIKGVVDALSY 553
+ +IV + +E ++ LSND L +++G L Y
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-----YQILRG----LKY 139
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN---WAELAGTYGYVAP 610
+H+ ++HRD+ N+LL+ + + DFG A+ PD + E T Y AP
Sbjct: 140 IHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 611 ELAYTMK-VTEKCDVYSFGVLALEVIKGK 638
E+ K T+ D++S G + E++ +
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 8/205 (3%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+F IG+G G VYKA +GE+VA+KK +E + E+ L + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 62
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NIVK ++V+E+L + ++ L K + + ++ L++
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 120
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRD+ +N+L++ E ++DFG A+ + T Y APE+
Sbjct: 121 HSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 615 TMK-VTEKCDVYSFGVLALEVIKGK 638
K + D++S G + E++ +
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 28/209 (13%)
Query: 444 IGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IG+G G V A ++ VA+KK SP + Q+ L E+K L RH NI+
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 96
Query: 503 FC-----SHARHSFIVYEYLEMGSLAMI----LSNDAAAKDLGWTKRMNVIKGVVDALSY 553
+ +IV + +E ++ LSND L +++G L Y
Sbjct: 97 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-----YQILRG----LKY 147
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN---WAELAGTYGYVAP 610
+H+ ++HRD+ N+LL+ + + DFG A+ PD + E T Y AP
Sbjct: 148 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 204
Query: 611 ELAYTMK-VTEKCDVYSFGVLALEVIKGK 638
E+ K T+ D++S G + E++ +
Sbjct: 205 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 28/209 (13%)
Query: 444 IGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IG+G G V A ++ VA+KK SP + Q+ L E+K L RH NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 88
Query: 503 FC-----SHARHSFIVYEYLEMGSLAMI----LSNDAAAKDLGWTKRMNVIKGVVDALSY 553
+ +IV + +E ++ LSND L +++G L Y
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-----YQILRG----LKY 139
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN---WAELAGTYGYVAP 610
+H+ ++HRD+ N+LL+ + + DFG A+ PD + E T Y AP
Sbjct: 140 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 611 ELAYTMK-VTEKCDVYSFGVLALEVIKGK 638
E+ K T+ D++S G + E++ +
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 117/279 (41%), Gaps = 32/279 (11%)
Query: 444 IGKGGQGSVYKA---ELPSGEI---VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNI 497
+G+G G VY+ ++ GE VAVK + + + + EFLNE + G ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHV 82
Query: 498 VKFYGFCSHARHSFIVYEYLEMGSLAMIL-------SNDAAAKDLGWTKRMNVIKGVVDA 550
V+ G S + + +V E + G L L N+ + + + + D
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 551 LSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG--TYGYV 608
++Y++ F VHRD++++N ++ + + DFG + + G ++
Sbjct: 143 MAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 609 APELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLP 667
APE T D++SFGV+ E+ + P + E L ++D
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQP--------YQGLSNEQVLKFVMDGGYL 251
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
N +++ +M + C +P+ RPT ++ LLK
Sbjct: 252 DQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLK 287
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 18/202 (8%)
Query: 444 IGKGGQGSVYKAELP-----SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIV 498
+GKG GSV +G +VAVK+ P + Q++F E++ L + IV
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ---QRDFQREIQILKALHSDFIV 71
Query: 499 KFYG--FCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHN 556
K+ G + +V EYL G L L A D ++ + + + Y+ +
Sbjct: 72 KYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDA--SRLLLYSSQICKGMEYLGS 129
Query: 557 DCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG---YVAPELA 613
VHRD++++N+L++ E ++DFG AK L D + APE
Sbjct: 130 R---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESL 186
Query: 614 YTMKVTEKCDVYSFGVLALEVI 635
+ + DV+SFGV+ E+
Sbjct: 187 SDNIFSRQSDVWSFGVVLYELF 208
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 91/212 (42%), Gaps = 22/212 (10%)
Query: 438 FDDEHCIGKGGQGSVYKAELPSGEIVAVKKFH-SPLPSEMASQQEFLNEVKTLTGIRHRN 496
FD E IG+G +VYK L + V V + +Q F E + L G++H N
Sbjct: 30 FDIE--IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPN 86
Query: 497 IVKFY----GFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD---LGWTKRMNVIKGVVD 549
IV+FY + +V E G+L L K W ++ ++KG
Sbjct: 87 IVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQ--ILKG--- 141
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLD-LENEAHVSDFGTAKFLKPDSSNWAELAGTYGYV 608
L ++H PPI+HRD+ N+ + + D G A + +S + GT +
Sbjct: 142 -LQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR--ASFAKAVIGTPEFX 197
Query: 609 APELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
APE Y K E DVY+FG LE ++P
Sbjct: 198 APE-XYEEKYDESVDVYAFGXCXLEXATSEYP 228
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 118/280 (42%), Gaps = 25/280 (8%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIV----AVKKFHSPLPSEMASQQEFLNEVKTLT 490
+F +G G G+VYK +P GE V A+K+ + + +E L+E +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMA 75
Query: 491 GIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD-LGWTKRMNVIKGVVD 549
+ + ++ + G C + I ++ +L KD +G +N +
Sbjct: 76 SVDNPHVCRLLGICLTSTVQLIT----QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GY 607
++Y+ + +VHRD++++NVL+ ++DFG AK L + + G +
Sbjct: 132 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRL 666
+A E T + DV+S+GV E++ G P D EI+ RL
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-------EISSILEKGERL 241
Query: 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P P D + +++ + D P+ R I + S++ +
Sbjct: 242 PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 281
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 120/281 (42%), Gaps = 36/281 (12%)
Query: 444 IGKGGQGSVYKA---ELPSGEI---VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNI 497
+G+G G VY+ ++ GE VAVK + + + + EFLNE + G ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHV 82
Query: 498 VKFYGFCSHARHSFIVYEYLEMGSLAMIL-------SNDAAAKDLGWTKRMNVIKGVVDA 550
V+ G S + + +V E + G L L N+ + + + + D
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 551 LSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT----YG 606
++Y++ F VHRD++++N ++ + + DFG + + +++ G
Sbjct: 143 MAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVR 197
Query: 607 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPR 665
++APE T D++SFGV+ E+ + P + E L ++D
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP--------YQGLSNEQVLKFVMDGG 249
Query: 666 LPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
N +++ +M + C +P+ RPT ++ LLK
Sbjct: 250 YLDQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLK 287
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 118/280 (42%), Gaps = 25/280 (8%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIV----AVKKFHSPLPSEMASQQEFLNEVKTLT 490
+F +G G G+VYK +P GE V A+K+ + + +E L+E +
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMA 78
Query: 491 GIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD-LGWTKRMNVIKGVVD 549
+ + ++ + G C + I ++ +L KD +G +N +
Sbjct: 79 SVDNPHVCRLLGICLTSTVQLIT----QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 134
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GY 607
++Y+ + +VHRD++++NVL+ ++DFG AK L + + G +
Sbjct: 135 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 191
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRL 666
+A E T + DV+S+GV E++ G P D EI+ RL
Sbjct: 192 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-------EISSILEKGERL 244
Query: 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P P D + +++ + D P+ R I + S++ +
Sbjct: 245 PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 284
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 118/280 (42%), Gaps = 25/280 (8%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIV----AVKKFHSPLPSEMASQQEFLNEVKTLT 490
+F +G G G+VYK +P GE V A+K+ + + +E L+E +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMA 75
Query: 491 GIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD-LGWTKRMNVIKGVVD 549
+ + ++ + G C + I ++ +L KD +G +N +
Sbjct: 76 SVDNPHVCRLLGICLTSTVQLIT----QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GY 607
++Y+ + +VHRD++++NVL+ ++DFG AK L + + G +
Sbjct: 132 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRL 666
+A E T + DV+S+GV E++ G P D EI+ RL
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-------EISSILEKGERL 241
Query: 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P P D + +++ + D P+ R I + S++ +
Sbjct: 242 PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 281
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 28/209 (13%)
Query: 444 IGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IG+G G V A ++ VA+KK SP + Q+ L E+K L RH NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 88
Query: 503 FC-----SHARHSFIVYEYLEMGSLAMI----LSNDAAAKDLGWTKRMNVIKGVVDALSY 553
+ +IV + +E ++ LSND L +++G L Y
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-----YQILRG----LKY 139
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN---WAELAGTYGYVAP 610
+H+ ++HRD+ N+LL+ + + DFG A+ PD + E T Y AP
Sbjct: 140 IHS---ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 611 ELAYTMK-VTEKCDVYSFGVLALEVIKGK 638
E+ K T+ D++S G + E++ +
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 118/280 (42%), Gaps = 25/280 (8%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIV----AVKKFHSPLPSEMASQQEFLNEVKTLT 490
+F +G G G+VYK +P GE V A+K+ + + +E L+E +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMA 72
Query: 491 GIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD-LGWTKRMNVIKGVVD 549
+ + ++ + G C + I ++ +L KD +G +N +
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLIT----QLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GY 607
++Y+ + +VHRD++++NVL+ ++DFG AK L + + G +
Sbjct: 129 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRL 666
+A E T + DV+S+GV E++ G P D EI+ RL
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-------EISSILEKGERL 238
Query: 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P P D + +++ + D P+ R I + S++ +
Sbjct: 239 PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 118/280 (42%), Gaps = 25/280 (8%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIV----AVKKFHSPLPSEMASQQEFLNEVKTLT 490
+F +G G G+VYK +P GE V A+K+ + + +E L+E +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMA 72
Query: 491 GIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD-LGWTKRMNVIKGVVD 549
+ + ++ + G C + I ++ +L KD +G +N +
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLIT----QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GY 607
++Y+ + +VHRD++++NVL+ ++DFG AK L + + G +
Sbjct: 129 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRL 666
+A E T + DV+S+GV E++ G P D EI+ RL
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-------EISSILEKGERL 238
Query: 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P P D + +++ + D P+ R I + S++ +
Sbjct: 239 PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 28/209 (13%)
Query: 444 IGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IG+G G V A ++ VA+KK SP + Q+ L E+K L RH NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 88
Query: 503 FC-----SHARHSFIVYEYLEMGSLAMI----LSNDAAAKDLGWTKRMNVIKGVVDALSY 553
+ +IV + +E ++ LSND L +++G L Y
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-----YQILRG----LKY 139
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN---WAELAGTYGYVAP 610
+H+ ++HRD+ N+LL+ + + DFG A+ PD + E T Y AP
Sbjct: 140 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 611 ELAYTMK-VTEKCDVYSFGVLALEVIKGK 638
E+ K T+ D++S G + E++ +
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 118/280 (42%), Gaps = 25/280 (8%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIV----AVKKFHSPLPSEMASQQEFLNEVKTLT 490
+F +G G G+VYK +P GE V A+K+ + + +E L+E +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMA 79
Query: 491 GIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD-LGWTKRMNVIKGVVD 549
+ + ++ + G C + I ++ +L KD +G +N +
Sbjct: 80 SVDNPHVCRLLGICLTSTVQLIT----QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 135
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GY 607
++Y+ + +VHRD++++NVL+ ++DFG AK L + + G +
Sbjct: 136 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRL 666
+A E T + DV+S+GV E++ G P D EI+ RL
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-------EISSILEKGERL 245
Query: 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P P D + +++ + D P+ R I + S++ +
Sbjct: 246 PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 285
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 8/205 (3%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+F IG+G G VYKA +GE+VA+KK +E + E+ L + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 61
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NIVK ++V+E+L + ++ L K + + ++ L++
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIK--SYLFQLLQGLAFC 119
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRD+ +N+L++ E ++DFG A+ + T Y APE+
Sbjct: 120 HSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 615 TMK-VTEKCDVYSFGVLALEVIKGK 638
K + D++S G + E++ +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 93/199 (46%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 111
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 112 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 167
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + T Y APE+ M
Sbjct: 168 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGY---VATRWYRAPEIMLNWMHYN 224
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 225 QTVDIWSVGCIMAELLTGR 243
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 117/279 (41%), Gaps = 32/279 (11%)
Query: 444 IGKGGQGSVYKA---ELPSGEI---VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNI 497
+G+G G VY+ ++ GE VAVK + + + + EFLNE + G ++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHV 79
Query: 498 VKFYGFCSHARHSFIVYEYLEMGSLAMIL-------SNDAAAKDLGWTKRMNVIKGVVDA 550
V+ G S + + +V E + G L L N+ + + + + D
Sbjct: 80 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 139
Query: 551 LSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG--TYGYV 608
++Y++ F VHRD++++N ++ + + DFG + + G ++
Sbjct: 140 MAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 196
Query: 609 APELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLP 667
APE T D++SFGV+ E+ + P + E L ++D
Sbjct: 197 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQP--------YQGLSNEQVLKFVMDGGYL 248
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
N +++ +M + C +P+ RPT ++ LLK
Sbjct: 249 DQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLK 284
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 90/212 (42%), Gaps = 17/212 (8%)
Query: 437 DFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRN 496
D++ IG+G G V S V K S S F E + + +
Sbjct: 75 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 134
Query: 497 IVK--FYGFCSHARHSFIVYEYLEMGSLAMILSN-DAAAKDLGWTKRMNVIKGVVDALSY 553
V FY F R+ ++V EY+ G L ++SN D K W + VV AL
Sbjct: 135 WVVQLFYAF-QDDRYLYMVMEYMPGGDLVNLMSNYDVPEK---WARFYTA--EVVLALDA 188
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELA-GTYGYVAPEL 612
+H+ F +HRD+ N+LLD ++DFGT + + + A GT Y++PE+
Sbjct: 189 IHSMGF---IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEV 245
Query: 613 AYTM----KVTEKCDVYSFGVLALEVIKGKHP 640
+ +CD +S GV E++ G P
Sbjct: 246 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 15/200 (7%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + SGE VA+KK P SE+ +++ + E+ L ++H N++
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAY-RELLLLKHMQHENVIGLLD 108
Query: 503 FCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPI 562
+ A Y++ + + K ++ ++ L Y+H+ +
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAG---V 165
Query: 563 VHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG---TYGYVAPELAYT-MKV 618
VHRD+ N+ ++ + E + DFG A+ AE+ G T Y APE+ + M
Sbjct: 166 VHRDLKPGNLAVNEDCELKILDFGLARHAD------AEMTGYVVTRWYRAPEVILSWMHY 219
Query: 619 TEKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ GK
Sbjct: 220 NQTVDIWSVGCIMAEMLTGK 239
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 118/280 (42%), Gaps = 25/280 (8%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIV----AVKKFHSPLPSEMASQQEFLNEVKTLT 490
+F +G G G+VYK +P GE V A+K+ + + +E L+E +
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMA 66
Query: 491 GIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD-LGWTKRMNVIKGVVD 549
+ + ++ + G C + I ++ +L KD +G +N +
Sbjct: 67 SVDNPHVCRLLGICLTSTVQLIT----QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 122
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GY 607
++Y+ + +VHRD++++NVL+ ++DFG AK L + + G +
Sbjct: 123 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 179
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRL 666
+A E T + DV+S+GV E++ G P D EI+ RL
Sbjct: 180 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-------EISSILEKGERL 232
Query: 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P P D + +++ + D P+ R I + S++ +
Sbjct: 233 PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 272
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 118/280 (42%), Gaps = 25/280 (8%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIV----AVKKFHSPLPSEMASQQEFLNEVKTLT 490
+F +G G G+VYK +P GE V A+K+ + + +E L+E +
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMA 97
Query: 491 GIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD-LGWTKRMNVIKGVVD 549
+ + ++ + G C + I ++ +L KD +G +N +
Sbjct: 98 SVDNPHVCRLLGICLTSTVQLIT----QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 153
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GY 607
++Y+ + +VHRD++++NVL+ ++DFG AK L + + G +
Sbjct: 154 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 210
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRL 666
+A E T + DV+S+GV E++ G P D EI+ RL
Sbjct: 211 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-------EISSILEKGERL 263
Query: 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P P D + +++ + D P+ R I + S++ +
Sbjct: 264 PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 303
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 119/265 (44%), Gaps = 42/265 (15%)
Query: 463 VAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGFCSHARHSFIVYEYLEMGS 521
VAVK S ++ ++ ++E+K ++ + +H NIV G C+H ++ EY G
Sbjct: 79 VAVKMLKSTAHAD--EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 522 L-------AMILSND---------AAAKDLGWTKRMNVIKGVVDALSYMHN-DCFPPIVH 564
L + +L D A+ +DL ++ V ++++ + +C +H
Sbjct: 137 LLNFLRRKSRVLETDPAFAIANSTASTRDL-----LHFSSQVAQGMAFLASKNC----IH 187
Query: 565 RDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT--YGYVAPELAYTMKVTEKC 622
RD++++NVLL + A + DFG A+ + DS+ + ++APE + T +
Sbjct: 188 RDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQS 247
Query: 623 DVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISIM 681
DV+S+G+L E+ G +P ++ +M P + + SIM
Sbjct: 248 DVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGY-QMAQPAFAPKN------IYSIM 300
Query: 682 EVAISCLDESPESRPTIQKVSQLLK 706
+ +C P RPT Q++ L+
Sbjct: 301 Q---ACWALEPTHRPTFQQICSFLQ 322
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 28/209 (13%)
Query: 444 IGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IG+G G V A ++ VA+KK SP + Q+ L E+K L RH NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 92
Query: 503 FC-----SHARHSFIVYEYLEMGSLAMI----LSNDAAAKDLGWTKRMNVIKGVVDALSY 553
+ +IV + +E ++ LSND L +++G L Y
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-----YQILRG----LKY 143
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN---WAELAGTYGYVAP 610
+H+ ++HRD+ N+LL+ + + DFG A+ PD + E T Y AP
Sbjct: 144 IHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 611 ELAYTMK-VTEKCDVYSFGVLALEVIKGK 638
E+ K T+ D++S G + E++ +
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 120/281 (42%), Gaps = 36/281 (12%)
Query: 444 IGKGGQGSVYKA---ELPSGEI---VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNI 497
+G+G G VY+ ++ GE VAVK + + + + EFLNE + G ++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHV 81
Query: 498 VKFYGFCSHARHSFIVYEYLEMGSLAMIL-------SNDAAAKDLGWTKRMNVIKGVVDA 550
V+ G S + + +V E + G L L N+ + + + + D
Sbjct: 82 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 551 LSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT----YG 606
++Y++ F VHRD++++N ++ + + DFG + + +++ G
Sbjct: 142 MAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVR 196
Query: 607 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPR 665
++APE T D++SFGV+ E+ + P + E L ++D
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP--------YQGLSNEQVLKFVMDGG 248
Query: 666 LPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
N +++ +M + C +P+ RPT ++ LLK
Sbjct: 249 YLDQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLK 286
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 90/212 (42%), Gaps = 17/212 (8%)
Query: 437 DFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRN 496
D++ IG+G G V S V K S S F E + + +
Sbjct: 70 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 129
Query: 497 IVK--FYGFCSHARHSFIVYEYLEMGSLAMILSN-DAAAKDLGWTKRMNVIKGVVDALSY 553
V FY F R+ ++V EY+ G L ++SN D K W + VV AL
Sbjct: 130 WVVQLFYAF-QDDRYLYMVMEYMPGGDLVNLMSNYDVPEK---WARFYTA--EVVLALDA 183
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELA-GTYGYVAPEL 612
+H+ F +HRD+ N+LLD ++DFGT + + + A GT Y++PE+
Sbjct: 184 IHSMGF---IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEV 240
Query: 613 AYTM----KVTEKCDVYSFGVLALEVIKGKHP 640
+ +CD +S GV E++ G P
Sbjct: 241 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 28/209 (13%)
Query: 444 IGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IG+G G V A ++ VA+KK SP + Q+ L E+K L RH NI+
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 108
Query: 503 FC-----SHARHSFIVYEYLEMGSLAMI----LSNDAAAKDLGWTKRMNVIKGVVDALSY 553
+ +IV + +E ++ LSND L +++G L Y
Sbjct: 109 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-----YQILRG----LKY 159
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN---WAELAGTYGYVAP 610
+H+ ++HRD+ N+LL+ + + DFG A+ PD + E T Y AP
Sbjct: 160 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 216
Query: 611 ELAYTMK-VTEKCDVYSFGVLALEVIKGK 638
E+ K T+ D++S G + E++ +
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 108
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 109 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 164
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + T Y APE+ M
Sbjct: 165 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXG---XVATRWYRAPEIMLNWMHYN 221
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 222 QTVDIWSVGCIMAELLTGR 240
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 28/209 (13%)
Query: 444 IGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IG+G G V A ++ VA+KK SP + Q+ L E+K L RH NI+
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 90
Query: 503 FC-----SHARHSFIVYEYLEMGSLAMI----LSNDAAAKDLGWTKRMNVIKGVVDALSY 553
+ +IV + +E ++ LSND L +++G L Y
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-----YQILRG----LKY 141
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN---WAELAGTYGYVAP 610
+H+ ++HRD+ N+LL+ + + DFG A+ PD + E T Y AP
Sbjct: 142 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 611 ELAYTMK-VTEKCDVYSFGVLALEVIKGK 638
E+ K T+ D++S G + E++ +
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 28/209 (13%)
Query: 444 IGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IG+G G V A ++ VA+KK SP + Q+ L E+K L RH NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYXQRT-LREIKILLRFRHENIIGIND 92
Query: 503 FC-----SHARHSFIVYEYLEMGSLAMI----LSNDAAAKDLGWTKRMNVIKGVVDALSY 553
+ +IV + +E ++ LSND L +++G L Y
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-----YQILRG----LKY 143
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN---WAELAGTYGYVAP 610
+H+ ++HRD+ N+LL+ + + DFG A+ PD + E T Y AP
Sbjct: 144 IHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 611 ELAYTMK-VTEKCDVYSFGVLALEVIKGK 638
E+ K T+ D++S G + E++ +
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 90/212 (42%), Gaps = 17/212 (8%)
Query: 437 DFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRN 496
D++ IG+G G V S V K S S F E + + +
Sbjct: 75 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 134
Query: 497 IVK--FYGFCSHARHSFIVYEYLEMGSLAMILSN-DAAAKDLGWTKRMNVIKGVVDALSY 553
V FY F R+ ++V EY+ G L ++SN D K W + VV AL
Sbjct: 135 WVVQLFYAF-QDDRYLYMVMEYMPGGDLVNLMSNYDVPEK---WARFYTA--EVVLALDA 188
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELA-GTYGYVAPEL 612
+H+ F +HRD+ N+LLD ++DFGT + + + A GT Y++PE+
Sbjct: 189 IHSMGF---IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEV 245
Query: 613 AYTM----KVTEKCDVYSFGVLALEVIKGKHP 640
+ +CD +S GV E++ G P
Sbjct: 246 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 28/209 (13%)
Query: 444 IGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IG+G G V A ++ VA+KK SP + Q+ L E+K L RH NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 92
Query: 503 FC-----SHARHSFIVYEYLEMGSLAMI----LSNDAAAKDLGWTKRMNVIKGVVDALSY 553
+ +IV + +E ++ LSND L +++G L Y
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFL-----YQILRG----LKY 143
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN---WAELAGTYGYVAP 610
+H+ ++HRD+ N+LL+ + + DFG A+ PD + E T Y AP
Sbjct: 144 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 611 ELAYTMK-VTEKCDVYSFGVLALEVIKGK 638
E+ K T+ D++S G + E++ +
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 116/279 (41%), Gaps = 32/279 (11%)
Query: 444 IGKGGQGSVYKA---ELPSGEI---VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNI 497
+G+G G VY+ ++ GE VAVK + + + + EFLNE + G ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHV 82
Query: 498 VKFYGFCSHARHSFIVYEYLEMGSLAMIL-------SNDAAAKDLGWTKRMNVIKGVVDA 550
V+ G S + + +V E + G L L N+ + + + + D
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 551 LSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG--TYGYV 608
++Y++ F VHRD++++N ++ + + DFG + + G ++
Sbjct: 143 MAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 609 APELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLP 667
APE T D++SFGV+ E+ + P + E L ++D
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQP--------YQGLSNEQVLKFVMDGGYL 251
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
N +++ +M + C +P RPT ++ LLK
Sbjct: 252 DQPDNCPERVTDLMRM---CWQFNPNMRPTFLEIVNLLK 287
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 122/297 (41%), Gaps = 52/297 (17%)
Query: 443 CIGKGGQGSVYKAEL------PSGEIVAVKKF-HSPLPSEMASQQEFLNEVKTLTGIRHR 495
+G+G G V KA VAVK + PSE+ ++ L+E L + H
Sbjct: 30 TLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSEL---RDLLSEFNVLKQVNHP 86
Query: 496 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSN-----------------------DAAA 532
+++K YG CS ++ EY + GSL L D A
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 533 KDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLK 592
+G ++ + + Y+ +VHRD++++N+L+ + +SDFG ++ +
Sbjct: 147 LTMG--DLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 593 PDSSNWAELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXX 649
+ S G ++A E + T + DV+SFGVL E++ G +P +
Sbjct: 202 EEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP--YPGIPPE 259
Query: 650 XXXNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
NL + M P N +++ +M + C + P+ RP +S+ L+
Sbjct: 260 RLFNLLKTGHRMERP------DNCSEEMYRLM---LQCWKQEPDKRPVFADISKDLE 307
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 93/199 (46%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 89 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + T Y APE+ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---XVATRWYRAPEIMLNWMHYN 201
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 28/209 (13%)
Query: 444 IGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IG+G G V A ++ VA+KK SP + Q+ L E+K L RH NI+
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 93
Query: 503 FC-----SHARHSFIVYEYLEMGSLAMI----LSNDAAAKDLGWTKRMNVIKGVVDALSY 553
+ +IV + +E ++ LSND L +++G L Y
Sbjct: 94 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-----YQILRG----LKY 144
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN---WAELAGTYGYVAP 610
+H+ ++HRD+ N+LL+ + + DFG A+ PD + E T Y AP
Sbjct: 145 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 201
Query: 611 ELAYTMK-VTEKCDVYSFGVLALEVIKGK 638
E+ K T+ D++S G + E++ +
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 444 IGKGGQGSV---YKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
+G G GSV Y A L + VAVKK P S + +++ + E++ L ++H N++
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGL 92
Query: 501 YGFCSHARHSFIVYE-YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCF 559
+ A E YL + L+N ++ L ++ ++ L Y+H+
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAG- 151
Query: 560 PPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKV 618
I+HRD+ NV ++ ++E + DFG A+ + + + T Y APE+ M
Sbjct: 152 --IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGY---VATRWYRAPEIMLNWMHY 206
Query: 619 TEKCDVYSFGVLALEVIKGK 638
+ D++S G + E+++GK
Sbjct: 207 NQTVDIWSVGCIMAELLQGK 226
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 28/209 (13%)
Query: 444 IGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IG+G G V A ++ VA+KK SP + Q+ L E+K L RH NI+
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 94
Query: 503 FC-----SHARHSFIVYEYLEMGSLAMI----LSNDAAAKDLGWTKRMNVIKGVVDALSY 553
+ +IV + +E ++ LSND L +++G L Y
Sbjct: 95 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-----YQILRG----LKY 145
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN---WAELAGTYGYVAP 610
+H+ ++HRD+ N+LL+ + + DFG A+ PD + E T Y AP
Sbjct: 146 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 202
Query: 611 ELAYTMK-VTEKCDVYSFGVLALEVIKGK 638
E+ K T+ D++S G + E++ +
Sbjct: 203 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 28/209 (13%)
Query: 444 IGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IG+G G V A ++ VA+KK SP + Q+ L E+K L RH NI+
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 85
Query: 503 FC-----SHARHSFIVYEYLEMGSLAMI----LSNDAAAKDLGWTKRMNVIKGVVDALSY 553
+ +IV + +E ++ LSND L +++G L Y
Sbjct: 86 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-----YQILRG----LKY 136
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN---WAELAGTYGYVAP 610
+H+ ++HRD+ N+LL+ + + DFG A+ PD + E T Y AP
Sbjct: 137 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 193
Query: 611 ELAYTMK-VTEKCDVYSFGVLALEVIKGK 638
E+ K T+ D++S G + E++ +
Sbjct: 194 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 28/209 (13%)
Query: 444 IGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IG+G G V A ++ VA+KK SP + Q+ L E+K L RH NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 92
Query: 503 FC-----SHARHSFIVYEYLEMGSLAMI----LSNDAAAKDLGWTKRMNVIKGVVDALSY 553
+ +IV + +E ++ LSND L +++G L Y
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-----YQILRG----LKY 143
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN---WAELAGTYGYVAP 610
+H+ ++HRD+ N+LL+ + + DFG A+ PD + E T Y AP
Sbjct: 144 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 611 ELAYTMK-VTEKCDVYSFGVLALEVIKGK 638
E+ K T+ D++S G + E++ +
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 117/280 (41%), Gaps = 25/280 (8%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIV----AVKKFHSPLPSEMASQQEFLNEVKTLT 490
+F +G G G+VYK +P GE V A+K+ + + +E L+E +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMA 74
Query: 491 GIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD-LGWTKRMNVIKGVVD 549
+ + ++ + G C + I ++ +L KD +G +N +
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLIT----QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GY 607
++Y+ + +VHRD++++NVL+ ++DFG AK L + + G +
Sbjct: 131 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRL 666
+A E T + DV+S+GV E++ G P D EI+ RL
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-------EISSILEKGERL 240
Query: 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P P D + + + + D P+ R I + S++ +
Sbjct: 241 PQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 280
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 28/209 (13%)
Query: 444 IGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IG+G G V A ++ VA+KK SP + Q+ L E+K L RH NI+
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 86
Query: 503 FC-----SHARHSFIVYEYLEMGSLAMI----LSNDAAAKDLGWTKRMNVIKGVVDALSY 553
+ +IV + +E ++ LSND L +++G L Y
Sbjct: 87 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-----YQILRG----LKY 137
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN---WAELAGTYGYVAP 610
+H+ ++HRD+ N+LL+ + + DFG A+ PD + E T Y AP
Sbjct: 138 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194
Query: 611 ELAYTMK-VTEKCDVYSFGVLALEVIKGK 638
E+ K T+ D++S G + E++ +
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 117/280 (41%), Gaps = 25/280 (8%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIV----AVKKFHSPLPSEMASQQEFLNEVKTLT 490
+F +G G G+VYK +P GE V A+K+ + + +E L+E +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMA 72
Query: 491 GIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD-LGWTKRMNVIKGVVD 549
+ + ++ + G C + I ++ +L KD +G +N +
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLIT----QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GY 607
++Y+ + +VHRD++++NVL+ ++DFG AK L + + G +
Sbjct: 129 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRL 666
+A E T + DV+S+GV E++ G P D EI+ RL
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-------EISSILEKGERL 238
Query: 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P P D + + + + D P+ R I + S++ +
Sbjct: 239 PQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 93/205 (45%), Gaps = 8/205 (3%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+F IG+G G VYKA +GE+VA+KK +E + E+ L + H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 64
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NIVK ++V+E+++ + ++ L K + + ++ L++
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 122
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRD+ +N+L++ E ++DFG A+ + T Y APE+
Sbjct: 123 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 615 TMK-VTEKCDVYSFGVLALEVIKGK 638
K + D++S G + E++ +
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 28/209 (13%)
Query: 444 IGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IG+G G V A ++ VA+KK SP + Q+ L E+K L RH NI+
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 86
Query: 503 FC-----SHARHSFIVYEYLEMGSLAMI----LSNDAAAKDLGWTKRMNVIKGVVDALSY 553
+ +IV + +E ++ LSND L +++G L Y
Sbjct: 87 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-----YQILRG----LKY 137
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN---WAELAGTYGYVAP 610
+H+ ++HRD+ N+LL+ + + DFG A+ PD + E T Y AP
Sbjct: 138 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194
Query: 611 ELAYTMK-VTEKCDVYSFGVLALEVIKGK 638
E+ K T+ D++S G + E++ +
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 8/205 (3%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+F IG+G G VYKA +GE+VA+KK +E + E+ L + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 60
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NIVK ++V+E++ + ++ L K + + ++ L++
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRD+ +N+L++ E ++DFG A+ + T Y APE+
Sbjct: 119 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 615 TMK-VTEKCDVYSFGVLALEVIKGK 638
K + D++S G + E++ +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 119/283 (42%), Gaps = 31/283 (10%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGE-------IVAVKKFHSPLPSEMASQQEFLNEVK 487
+F +G G G+VYK +P GE I+ +++ SP + +E L+E
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSP-----KANKEILDEAY 103
Query: 488 TLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD-LGWTKRMNVIKG 546
+ + + ++ + G C + I ++ +L KD +G +N
Sbjct: 104 VMASVDNPHVCRLLGICLTSTVQLIT----QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 159
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY- 605
+ ++Y+ + +VHRD++++NVL+ ++DFG AK L + + G
Sbjct: 160 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 216
Query: 606 -GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLD 663
++A E T + DV+S+GV E++ G P D EI+
Sbjct: 217 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-------EISSILEKG 269
Query: 664 PRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
RLP P D + +++ + D P+ R I + S++ +
Sbjct: 270 ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 312
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 28/209 (13%)
Query: 444 IGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IG+G G V A ++ VA+KK SP + Q+ L E+K L RH NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 92
Query: 503 FC-----SHARHSFIVYEYLEMGSLAMI----LSNDAAAKDLGWTKRMNVIKGVVDALSY 553
+ +IV + +E ++ LSND L +++G L Y
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-----YQILRG----LKY 143
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWA---ELAGTYGYVAP 610
+H+ ++HRD+ N+LL+ + + DFG A+ PD + E T Y AP
Sbjct: 144 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAP 200
Query: 611 ELAYTMK-VTEKCDVYSFGVLALEVIKGK 638
E+ K T+ D++S G + E++ +
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 117/280 (41%), Gaps = 25/280 (8%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIV----AVKKFHSPLPSEMASQQEFLNEVKTLT 490
+F +G G G+VYK +P GE V A+K+ + + +E L+E +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMA 75
Query: 491 GIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD-LGWTKRMNVIKGVVD 549
+ + ++ + G C + I ++ +L KD +G +N +
Sbjct: 76 SVDNPHVCRLLGICLTSTVQLIT----QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GY 607
++Y+ + +VHRD++++NVL+ ++DFG AK L + + G +
Sbjct: 132 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRL 666
+A E T + DV+S+GV E++ G P D EI+ RL
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-------EISSILEKGERL 241
Query: 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P P D + + + + D P+ R I + S++ +
Sbjct: 242 PQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 281
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 28/209 (13%)
Query: 444 IGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IG+G G V A ++ VA+KK SP + Q+ L E+K L RH NI+
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 93
Query: 503 FC-----SHARHSFIVYEYLEMGSLAMI----LSNDAAAKDLGWTKRMNVIKGVVDALSY 553
+ +IV + +E ++ LSND L +++G L Y
Sbjct: 94 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-----YQILRG----LKY 144
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWA---ELAGTYGYVAP 610
+H+ ++HRD+ N+LL+ + + DFG A+ PD + E T Y AP
Sbjct: 145 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAP 201
Query: 611 ELAYTMK-VTEKCDVYSFGVLALEVIKGK 638
E+ K T+ D++S G + E++ +
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 89 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + D+G A+ + + + T Y APE+ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 201
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 120/297 (40%), Gaps = 52/297 (17%)
Query: 443 CIGKGGQGSVYKAEL------PSGEIVAVKKF-HSPLPSEMASQQEFLNEVKTLTGIRHR 495
+G+G G V KA VAVK + PSE+ ++ L+E L + H
Sbjct: 30 TLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSEL---RDLLSEFNVLKQVNHP 86
Query: 496 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSN-----------------------DAAA 532
+++K YG CS ++ EY + GSL L D A
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 533 KDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLK 592
+G ++I M +VHRD++++N+L+ + +SDFG ++ +
Sbjct: 147 LTMG-----DLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 593 PDSSNWAELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXX 649
+ S G ++A E + T + DV+SFGVL E++ G +P +
Sbjct: 202 EEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP--YPGIPPE 259
Query: 650 XXXNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
NL + M P N +++ +M + C + P+ RP +S+ L+
Sbjct: 260 RLFNLLKTGHRMERP------DNCSEEMYRLM---LQCWKQEPDKRPVFADISKDLE 307
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 118/265 (44%), Gaps = 42/265 (15%)
Query: 463 VAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGFCSHARHSFIVYEYLEMGS 521
VAVK S ++ ++ ++E+K ++ + +H NIV G C+H ++ EY G
Sbjct: 79 VAVKMLKSTAHAD--EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 522 L-------AMILSNDAA---------AKDLGWTKRMNVIKGVVDALSYMHN-DCFPPIVH 564
L + +L D A +DL ++ V ++++ + +C +H
Sbjct: 137 LLNFLRRKSRVLETDPAFAIANSTLSTRDL-----LHFSSQVAQGMAFLASKNC----IH 187
Query: 565 RDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT--YGYVAPELAYTMKVTEKC 622
RD++++NVLL + A + DFG A+ + DS+ + ++APE + T +
Sbjct: 188 RDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQS 247
Query: 623 DVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISIM 681
DV+S+G+L E+ G +P ++ +M P + + SIM
Sbjct: 248 DVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGY-QMAQPAFAPKN------IYSIM 300
Query: 682 EVAISCLDESPESRPTIQKVSQLLK 706
+ +C P RPT Q++ L+
Sbjct: 301 Q---ACWALEPTHRPTFQQICSFLQ 322
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 118/279 (42%), Gaps = 32/279 (11%)
Query: 444 IGKGGQGSVYKA---ELPSGEI---VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNI 497
+G+G G VY+ ++ GE VAVK + + + + EFLNE + G ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHV 82
Query: 498 VKFYGFCSHARHSFIVYEYLEMGSLAMIL-------SNDAAAKDLGWTKRMNVIKGVVDA 550
V+ G S + + +V E + G L L N+ + + + + D
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 551 LSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG--TYGYV 608
++Y++ F VHRD++++N ++ + + DFG + + + G ++
Sbjct: 143 MAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWM 199
Query: 609 APELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLP 667
APE T D++SFGV+ E+ + P + E L ++D
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQP--------YQGLSNEQVLKFVMDGGYL 251
Query: 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
N +++ +M + C +P+ RPT ++ LLK
Sbjct: 252 DQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLK 287
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 18/216 (8%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIV----AVKKFHSPLPSEMASQQEFLNEVKTLT 490
+F +G G G+VYK +P GE V A+K+ + + +E L+E +
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMA 82
Query: 491 GIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD-LGWTKRMNVIKGVVD 549
+ + ++ + G C + I ++ +L KD +G +N +
Sbjct: 83 SVDNPHVCRLLGICLTSTVQLIT----QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 138
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GY 607
++Y+ + +VHRD++++NVL+ ++DFG AK L + + G +
Sbjct: 139 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 195
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRD 642
+A E T + DV+S+GV E++ G P D
Sbjct: 196 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 13/200 (6%)
Query: 448 GQGSVYKAELP----SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
G+GS K +L +G+ VA+K + + ++ Q E+ L +RH +I+K Y
Sbjct: 13 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV 72
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+V EY I+ D ++ + + ++ A+ Y H IV
Sbjct: 73 IKSKDEIIMVIEYAGNELFDYIVQRDKMSE----QEARRFFQQIISAVEYCHRH---KIV 125
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPE-LAYTMKVTEKC 622
HRD+ +N+LLD ++DFG + + D + G+ Y APE ++ + +
Sbjct: 126 HRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGPEV 184
Query: 623 DVYSFGVLALEVIKGKHPRD 642
DV+S GV+ ++ + P D
Sbjct: 185 DVWSCGVILYVMLCRRLPFD 204
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 14/200 (7%)
Query: 444 IGKGGQGSV---YKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
+G G GSV Y A L + VAVKK P S + +++ + E++ L ++H N++
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGL 92
Query: 501 YGFCSHARHSFIVYE-YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCF 559
+ A E YL + L+N + L ++ ++ L Y+H+
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG- 151
Query: 560 PPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKV 618
I+HRD+ NV ++ ++E + DFG A+ + + + T Y APE+ M
Sbjct: 152 --IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGY---VATRWYRAPEIMLNWMHY 206
Query: 619 TEKCDVYSFGVLALEVIKGK 638
+ D++S G + E+++GK
Sbjct: 207 NQTVDIWSVGCIMAELLQGK 226
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 96/220 (43%), Gaps = 44/220 (20%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
IGKG G V+ + GE VAVK F + + + E V +RH NI+ F
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVKVFFTTEEASWFRETEIYQTVL----MRHENILGFIAA 99
Query: 504 CSHARHS----FIVYEYLEMGSLAMIL-SNDAAAKDLGWTKRMNVIKGVVDALSYMHNDC 558
S +++ +Y E GSL L S AK + + + V L ++H +
Sbjct: 100 DIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSM-----LKLAYSSVSGLCHLHTEI 154
Query: 559 F-----PPIVHRDISSKNVLLDLENEAHVSDFGTA-KFLKPDSSNWAEL-----AGTYGY 607
F P I HRD+ SKN+L+ ++D G A KF+ +N ++ GT Y
Sbjct: 155 FSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFI--SDTNEVDIPPNTRVGTKRY 212
Query: 608 VAPEL-----------AYTMKVTEKCDVYSFGVLALEVIK 636
+ PE+ +Y M D+YSFG++ EV +
Sbjct: 213 MPPEVLDESLNRNHFQSYIM-----ADMYSFGLILWEVAR 247
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 13/200 (6%)
Query: 448 GQGSVYKAELP----SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
G+GS K +L +G+ VA+K + + ++ Q E+ L +RH +I+K Y
Sbjct: 17 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV 76
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+V EY I+ D ++ + + ++ A+ Y H IV
Sbjct: 77 IKSKDEIIMVIEYAGNELFDYIVQRDKMSE----QEARRFFQQIISAVEYCHRH---KIV 129
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPE-LAYTMKVTEKC 622
HRD+ +N+LLD ++DFG + + D + G+ Y APE ++ + +
Sbjct: 130 HRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGPEV 188
Query: 623 DVYSFGVLALEVIKGKHPRD 642
DV+S GV+ ++ + P D
Sbjct: 189 DVWSCGVILYVMLCRRLPFD 208
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 8/205 (3%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+F IG+G G VYKA +GE+VA+ K +E + E+ L + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTA-IREISLLKELNH 61
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NIVK ++V+E+L + ++ L K + + ++ L++
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 119
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRD+ +N+L++ E ++DFG A+ + T Y APE+
Sbjct: 120 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 615 TMK-VTEKCDVYSFGVLALEVIKGK 638
K + D++S G + E++ +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 8/205 (3%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+F IG+G G VYKA +GE+VA+ K +E + E+ L + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTA-IREISLLKELNH 60
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
NIVK ++V+E+L + ++ L K + + ++ L++
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ ++HRD+ +N+L++ E ++DFG A+ + T Y APE+
Sbjct: 119 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 615 TMK-VTEKCDVYSFGVLALEVIKGK 638
K + D++S G + E++ +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 79/163 (48%), Gaps = 17/163 (10%)
Query: 477 ASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAA--AKD 534
+ +F NE++ +T I++ + G ++ +I+YEY+E S IL D D
Sbjct: 85 SKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDS---ILKFDEYFFVLD 141
Query: 535 LGWTKRM------NVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTA 588
+T + +IK V+++ SY+HN+ I HRD+ N+L+D +SDFG +
Sbjct: 142 KNYTCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGES 199
Query: 589 KFLKPDSSNWAELAGTYGYVAPELAYTMKVTE--KCDVYSFGV 629
+++ + GTY ++ PE K D++S G+
Sbjct: 200 EYMVDKKIKGSR--GTYEFMPPEFFSNESSYNGAKVDIWSLGI 240
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 120/297 (40%), Gaps = 52/297 (17%)
Query: 443 CIGKGGQGSVYKAEL------PSGEIVAVKKF-HSPLPSEMASQQEFLNEVKTLTGIRHR 495
+G+G G V KA VAVK + PSE+ ++ L+E L + H
Sbjct: 30 TLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSEL---RDLLSEFNVLKQVNHP 86
Query: 496 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSN-----------------------DAAA 532
+++K YG CS ++ EY + GSL L D A
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 533 KDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLK 592
+G ++I M +VHRD++++N+L+ + +SDFG ++ +
Sbjct: 147 LTMG-----DLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 593 PDSSNWAELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXX 649
+ S G ++A E + T + DV+SFGVL E++ G +P +
Sbjct: 202 EEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP--YPGIPPE 259
Query: 650 XXXNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
NL + M P N +++ +M + C + P+ RP +S+ L+
Sbjct: 260 RLFNLLKTGHRMERP------DNCSEEMYRLM---LQCWKQEPDKRPVFADISKDLE 307
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 13/200 (6%)
Query: 448 GQGSVYKAELP----SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
G+GS K +L +G+ VA+K + + ++ Q E+ L +RH +I+K Y
Sbjct: 23 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV 82
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+V EY I+ D ++ + + ++ A+ Y H IV
Sbjct: 83 IKSKDEIIMVIEYAGNELFDYIVQRDKMSE----QEARRFFQQIISAVEYCHRH---KIV 135
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPE-LAYTMKVTEKC 622
HRD+ +N+LLD ++DFG + + D + G+ Y APE ++ + +
Sbjct: 136 HRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGPEV 194
Query: 623 DVYSFGVLALEVIKGKHPRD 642
DV+S GV+ ++ + P D
Sbjct: 195 DVWSCGVILYVMLCRRLPFD 214
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 103/211 (48%), Gaps = 11/211 (5%)
Query: 434 VTNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI 492
+T+++ +GKG V + ++P+G+ A K ++ S Q+ E + +
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLS-ARDHQKLEREARICRLL 60
Query: 493 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALS 552
+H NIV+ + S ++V++ + G L + A + + I+ ++++++
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIQQILESVN 117
Query: 553 YMHNDCFPPIVHRDISSKNVLLDLENEA---HVSDFGTAKFLKPDSSNWAELAGTYGYVA 609
+ H IVHRD+ +N+LL +++ ++DFG A ++ D W AGT GY++
Sbjct: 118 HCH---LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLS 174
Query: 610 PELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
PE+ + D+++ GV+ ++ G P
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 13/200 (6%)
Query: 448 GQGSVYKAELP----SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
G+GS K +L +G+ VA+K + + ++ Q E+ L +RH +I+K Y
Sbjct: 22 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV 81
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+V EY I+ D ++ + + ++ A+ Y H IV
Sbjct: 82 IKSKDEIIMVIEYAGNELFDYIVQRDKMSE----QEARRFFQQIISAVEYCHRH---KIV 134
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPE-LAYTMKVTEKC 622
HRD+ +N+LLD ++DFG + + D + G+ Y APE ++ + +
Sbjct: 135 HRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGPEV 193
Query: 623 DVYSFGVLALEVIKGKHPRD 642
DV+S GV+ ++ + P D
Sbjct: 194 DVWSCGVILYVMLCRRLPFD 213
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 28/209 (13%)
Query: 444 IGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IG+G G V A ++ VA++K SP + Q+ L E+K L RH NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKI-SPFEHQTYCQRT-LREIKILLRFRHENIIGIND 92
Query: 503 FC-----SHARHSFIVYEYLEMGSLAMI----LSNDAAAKDLGWTKRMNVIKGVVDALSY 553
+ +IV + +E ++ LSND L +++G L Y
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-----YQILRG----LKY 143
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN---WAELAGTYGYVAP 610
+H+ ++HRD+ N+LL+ + + DFG A+ PD + E T Y AP
Sbjct: 144 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 611 ELAYTMK-VTEKCDVYSFGVLALEVIKGK 638
E+ K T+ D++S G + E++ +
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 7/206 (3%)
Query: 438 FDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRN 496
F D +G+GG G V+ ++ +G++ A KK + + Q + E K L + R
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 497 IVKF-YGFCSHARHSFIVYEYLEMGSLAMILSN-DAAAKDLGWTKRMNVIKGVVDALSYM 554
IV Y F + +V + G + + N D + + +V L ++
Sbjct: 247 IVSLAYAFETKTDLC-LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHL 305
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H I++RD+ +NVLLD + +SD G A LK + AGT G++APEL
Sbjct: 306 HQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLL 362
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
+ D ++ GV E+I + P
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 7/206 (3%)
Query: 438 FDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRN 496
F D +G+GG G V+ ++ +G++ A KK + + Q + E K L + R
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 497 IVKF-YGFCSHARHSFIVYEYLEMGSLAMILSN-DAAAKDLGWTKRMNVIKGVVDALSYM 554
IV Y F + +V + G + + N D + + +V L ++
Sbjct: 247 IVSLAYAFETKTDLC-LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHL 305
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H I++RD+ +NVLLD + +SD G A LK + AGT G++APEL
Sbjct: 306 HQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLL 362
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
+ D ++ GV E+I + P
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 103/211 (48%), Gaps = 11/211 (5%)
Query: 434 VTNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI 492
+T+++ +GKG V + ++P+G+ A K ++ S Q+ E + +
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLS-ARDHQKLEREARICRLL 60
Query: 493 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALS 552
+H NIV+ + S ++V++ + G L + A + + I+ ++++++
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIQQILESVN 117
Query: 553 YMHNDCFPPIVHRDISSKNVLLDLENEA---HVSDFGTAKFLKPDSSNWAELAGTYGYVA 609
+ H IVHRD+ +N+LL +++ ++DFG A ++ D W AGT GY++
Sbjct: 118 HCH---LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLS 174
Query: 610 PELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
PE+ + D+++ GV+ ++ G P
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 101/232 (43%), Gaps = 28/232 (12%)
Query: 423 EGKIVYEEIIRVTNDFDDE-HC------IGKGGQGSVYK-AELPSGEIVAVKKFHSPLPS 474
EG ++ E++ V ++ +E H +G+G G V++ + +G AVKK +
Sbjct: 38 EGVLLTEKLKPVDYEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR 97
Query: 475 EMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD 534
+ E+ G+ IV YG I E LE GSL ++ +
Sbjct: 98 --------VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE 149
Query: 535 LGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLE-NEAHVSDFGTAKFLKP 593
+ + + ++ L Y+H I+H D+ + NVLL + + A + DFG A L+P
Sbjct: 150 ---DRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQP 203
Query: 594 DSSNWAELAGTY-----GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
D + L G Y ++APE+ K D++S + L ++ G HP
Sbjct: 204 DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 7/206 (3%)
Query: 438 FDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRN 496
F D +G+GG G V+ ++ +G++ A KK + + Q + E K L + R
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 497 IVKF-YGFCSHARHSFIVYEYLEMGSLAMILSN-DAAAKDLGWTKRMNVIKGVVDALSYM 554
IV Y F + +V + G + + N D + + +V L ++
Sbjct: 247 IVSLAYAFETKTDLC-LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHL 305
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H I++RD+ +NVLLD + +SD G A LK + AGT G++APEL
Sbjct: 306 HQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLL 362
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
+ D ++ GV E+I + P
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 101/232 (43%), Gaps = 28/232 (12%)
Query: 423 EGKIVYEEIIRVTNDFDDE-HC------IGKGGQGSVYK-AELPSGEIVAVKKFHSPLPS 474
EG ++ E++ V ++ +E H +G+G G V++ + +G AVKK +
Sbjct: 52 EGVLLTEKLKPVDYEYREEVHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR 111
Query: 475 EMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD 534
+ E+ G+ IV YG I E LE GSL ++ +
Sbjct: 112 --------VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE 163
Query: 535 LGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLE-NEAHVSDFGTAKFLKP 593
+ + + ++ L Y+H I+H D+ + NVLL + + A + DFG A L+P
Sbjct: 164 ---DRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQP 217
Query: 594 DSSNWAELAGTY-----GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
D + L G Y ++APE+ K D++S + L ++ G HP
Sbjct: 218 DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 7/206 (3%)
Query: 438 FDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRN 496
F D +G+GG G V+ ++ +G++ A KK + + Q + E K L + R
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 497 IVKF-YGFCSHARHSFIVYEYLEMGSLAMILSN-DAAAKDLGWTKRMNVIKGVVDALSYM 554
IV Y F + +V + G + + N D + + +V L ++
Sbjct: 247 IVSLAYAFETKTDLC-LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHL 305
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H I++RD+ +NVLLD + +SD G A LK + AGT G++APEL
Sbjct: 306 HQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLL 362
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
+ D ++ GV E+I + P
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 113/290 (38%), Gaps = 51/290 (17%)
Query: 444 IGKGGQGSVYKAE------LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHR-N 496
+G+G G V +A+ + VAVK + + + ++E+K L I H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLN 92
Query: 497 IVKFYGFCSHARHSF-IVYEYLEMGSLAMILSND----AAAKDLGWTKRMNVIKGVVDAL 551
+V G C+ ++ E+ + G+L+ L + KDL D L
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDL-----------YKDFL 141
Query: 552 SYMHNDCFP-------------PIVHRDISSKNVLLDLENEAHVSDFGTAK--FLKPDSS 596
+ H C+ +HRD++++N+LL +N + DFG A+ + PD
Sbjct: 142 TLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 201
Query: 597 NWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLE 655
+ ++APE + T + DV+SFGVL E+ G P L+
Sbjct: 202 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 261
Query: 656 IALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLL 705
M P TP + + + C P RPT ++ + L
Sbjct: 262 EG-TRMRAPDYTTP---------EMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 118/280 (42%), Gaps = 25/280 (8%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIV----AVKKFHSPLPSEMASQQEFLNEVKTLT 490
+F + G G+VYK +P GE V A+K+ + + +E L+E +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMA 79
Query: 491 GIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD-LGWTKRMNVIKGVVD 549
+ + ++ + G C + I +++ +L KD +G +N +
Sbjct: 80 SVDNPHVCRLLGICLTSTVQLI----MQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 135
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GY 607
++Y+ + +VHRD++++NVL+ ++DFG AK L + + G +
Sbjct: 136 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRL 666
+A E T + DV+S+GV E++ G P D EI+ RL
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-------EISSILEKGERL 245
Query: 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P P D + +++ + D P+ R I + S++ +
Sbjct: 246 PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 285
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 101/232 (43%), Gaps = 28/232 (12%)
Query: 423 EGKIVYEEIIRVTNDFDDE-HC------IGKGGQGSVYK-AELPSGEIVAVKKFHSPLPS 474
EG ++ E++ V ++ +E H +G+G G V++ + +G AVKK +
Sbjct: 54 EGVLLTEKLKPVDYEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR 113
Query: 475 EMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD 534
+ E+ G+ IV YG I E LE GSL ++ +
Sbjct: 114 --------VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE 165
Query: 535 LGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLE-NEAHVSDFGTAKFLKP 593
+ + + ++ L Y+H I+H D+ + NVLL + + A + DFG A L+P
Sbjct: 166 ---DRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQP 219
Query: 594 DSSNWAELAGTY-----GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
D + L G Y ++APE+ K D++S + L ++ G HP
Sbjct: 220 DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 434 VTNDFDDEHCIGKGGQGSVYK-AELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI 492
V + +D +G G G V++ E +G A K +P S+ ++ E++T++ +
Sbjct: 155 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESD---KETVRKEIQTMSVL 211
Query: 493 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALS 552
RH +V + ++YE++ G L ++++ + + + ++ V L
Sbjct: 212 RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEH--NKMSEDEAVEYMRQVCKGLC 269
Query: 553 YMHNDCFPPIVHRDISSKNVLLDLE--NEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAP 610
+MH + + VH D+ +N++ + NE + DFG L P S GT + AP
Sbjct: 270 HMHENNY---VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV-KVTTGTAEFAAP 325
Query: 611 ELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
E+A V D++S GVL+ ++ G P
Sbjct: 326 EVAEGKPVGYYTDMWSVGVLSYILLSGLSP 355
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 105/228 (46%), Gaps = 22/228 (9%)
Query: 480 QEFLNEVKTLTGIRHRNIVKFYGFCS--HARHSFIVYEYLEMGSLAMILSNDAAAKDLGW 537
++ E+ L + H N+VK + H ++V+E + G + + + ++D
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQAR 140
Query: 538 TKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN 597
++IKG+ Y+H + I+HRDI N+L+ + ++DFG + K +
Sbjct: 141 FYFQDLIKGI----EYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL 193
Query: 598 WAELAGTYGYVAPE-LAYTMKV--TEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNL 654
+ GT ++APE L+ T K+ + DV++ GV + G+ P +
Sbjct: 194 LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP---FMDERIMCLHS 250
Query: 655 EIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVS 702
+I + P P + +++D LI+ M LD++PESR + ++
Sbjct: 251 KIKSQALEFPDQPDIAEDLKD-LITRM------LDKNPESRIVVPEIK 291
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 123/274 (44%), Gaps = 36/274 (13%)
Query: 444 IGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVK-TLTGIRHRNIVKFY 501
+G+G G V K +PSG+I+AVK+ + + S+ Q+ L ++ ++ + V FY
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQ--EQKRLLMDLDISMRTVDCPFTVTFY 72
Query: 502 GFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIK----GVVDALSYMHND 557
G +I E ++ SL D G T +++ +V AL ++H+
Sbjct: 73 GALFREGDVWICMELMDT-SLDKFYKQ---VIDKGQTIPEDILGKIAVSIVKALEHLHSK 128
Query: 558 CFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPEL----- 612
++HRD+ NVL++ + + DFG + +L D + + AG Y+APE
Sbjct: 129 L--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID-AGCKPYMAPERINPEL 185
Query: 613 ---AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTP 669
Y++ K D++S G+ +E+ + P D L+ + E P+LP
Sbjct: 186 NQKGYSV----KSDIWSLGITMIELAILRFPYD---SWGTPFQQLKQVVEEP-SPQLPAD 237
Query: 670 SHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703
+ + ++ CL ++ + RPT ++ Q
Sbjct: 238 KFSAE-----FVDFTSQCLKKNSKERPTYPELMQ 266
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 114/269 (42%), Gaps = 41/269 (15%)
Query: 463 VAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGFCSHARHSFIVYEYLEMGS 521
VAVK S ++ ++ ++E+K ++ + +H NIV G C+H ++ EY G
Sbjct: 64 VAVKMLKSTAHAD--EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 121
Query: 522 LAMILSNDAAA--------------------KDLGWTKRMNVIKGVVDALSYMHN-DCFP 560
L L A A + L ++ V ++++ + +C
Sbjct: 122 LLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC-- 179
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT--YGYVAPELAYTMKV 618
+HRD++++NVLL + A + DFG A+ + DS+ + ++APE +
Sbjct: 180 --IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVY 237
Query: 619 TEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKL 677
T + DV+S+G+L E+ G +P ++ +M P +
Sbjct: 238 TVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGY-QMAQPAF------APKNI 290
Query: 678 ISIMEVAISCLDESPESRPTIQKVSQLLK 706
SIM+ +C P RPT Q++ L+
Sbjct: 291 YSIMQ---ACWALEPTHRPTFQQICSFLQ 316
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 89 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DF A+ + + + T Y APE+ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 201
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 434 VTNDFDDEHCIGKGGQGSVYK-AELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI 492
V + +D +G G G V++ E +G A K +P S+ ++ E++T++ +
Sbjct: 49 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESD---KETVRKEIQTMSVL 105
Query: 493 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALS 552
RH +V + ++YE++ G L ++++ + + + ++ V L
Sbjct: 106 RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK--MSEDEAVEYMRQVCKGLC 163
Query: 553 YMHNDCFPPIVHRDISSKNVLLDLE--NEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAP 610
+MH + + VH D+ +N++ + NE + DFG L P S GT + AP
Sbjct: 164 HMHENNY---VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV-TTGTAEFAAP 219
Query: 611 ELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
E+A V D++S GVL+ ++ G P
Sbjct: 220 EVAEGKPVGYYTDMWSVGVLSYILLSGLSP 249
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 110/273 (40%), Gaps = 36/273 (13%)
Query: 441 EHCIGKGGQGSVYKAEL---PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNI 497
+ IGKG G VY E I K S + +EM + FL E + G+ H N+
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI-TEMQQVEAFLREGLLMRGLNHPNV 84
Query: 498 VKFYGFCSHARH-SFIVYEYLEMGSLAMIL---SNDAAAKDLGWTKRMNVIKGVVDALSY 553
+ G ++ Y+ G L + + KDL ++ V + Y
Sbjct: 85 LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDL-----ISFGLQVARGMEY 139
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAK------FLKPDSSNWAELAGTYGY 607
+ F VHRD++++N +LD V+DFG A+ + A L +
Sbjct: 140 LAEQKF---VHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLP--VKW 194
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFXXXXXXXXXNLEIALNEMLDPRL 666
A E T + T K DV+SFGVL E++ +G P +L L + RL
Sbjct: 195 TALESLQTYRFTTKSDVWSFGVLLWELLTRGAPP-----YRHIDPFDLTHFLAQ--GRRL 247
Query: 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQ 699
P P + D L +M+ C + P RPT +
Sbjct: 248 PQPEY-CPDSLYQVMQ---QCWEADPAVRPTFR 276
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 109/266 (40%), Gaps = 19/266 (7%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI--- 492
DFD IG+G V L + + K + E+ + E ++ V+T +
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKV---VKKELVNDDEDIDWVQTEKHVFEQ 65
Query: 493 --RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDA 550
H +V + F V EY+ G L + + L + A
Sbjct: 66 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLA 122
Query: 551 LSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAK-FLKPDSSNWAELAGTYGYVA 609
L+Y+H I++RD+ NVLLD E ++D+G K L+P + + GT Y+A
Sbjct: 123 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTPNYIA 178
Query: 610 PELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTP 669
PE+ D ++ GVL E++ G+ P D N E L +++ +
Sbjct: 179 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI 238
Query: 670 SHNVQDKLISIMEVAISCLDESPESR 695
++ K S+++ S L++ P+ R
Sbjct: 239 PRSLSVKAASVLK---SFLNKDPKER 261
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 109/266 (40%), Gaps = 19/266 (7%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI--- 492
DFD IG+G V L + + K + E+ + E ++ V+T +
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKV---VKKELVNDDEDIDWVQTEKHVFEQ 61
Query: 493 --RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDA 550
H +V + F V EY+ G L + + L + A
Sbjct: 62 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLA 118
Query: 551 LSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKF-LKPDSSNWAELAGTYGYVA 609
L+Y+H I++RD+ NVLLD E ++D+G K L+P + + GT Y+A
Sbjct: 119 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTPNYIA 174
Query: 610 PELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTP 669
PE+ D ++ GVL E++ G+ P D N E L +++ +
Sbjct: 175 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI 234
Query: 670 SHNVQDKLISIMEVAISCLDESPESR 695
++ K S+++ S L++ P+ R
Sbjct: 235 PRSLSVKAASVLK---SFLNKDPKER 257
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 113/279 (40%), Gaps = 29/279 (10%)
Query: 444 IGKGGQGSVYKAE------LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHR-N 496
+G+G G V +A+ + VAVK + + + ++E+K L I H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLN 92
Query: 497 IVKFYGFCSHARHSF-IVYEYLEMGSLAMILSND----AAAKDL--GWTKRMNVIKGVVD 549
+V G C+ ++ E+ + G+L+ L + KDL + ++I
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQ 152
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAK--FLKPDSSNWAELAGTYGY 607
M +HRD++++N+LL +N + DFG A+ + PD + +
Sbjct: 153 VAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKW 212
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRL 666
+APE + T + DV+SFGVL E+ G P L+ M P
Sbjct: 213 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEG-TRMRAPDY 271
Query: 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLL 705
TP + + + C P RPT ++ + L
Sbjct: 272 TTP---------EMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 14/200 (7%)
Query: 444 IGKGGQGSV---YKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
+G G GSV Y A L + VAVKK P S + +++ + E++ L ++H N++
Sbjct: 28 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGL 84
Query: 501 YGFCSHARHSFIVYE-YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCF 559
+ A E YL + L+N + L ++ ++ L Y+H+
Sbjct: 85 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS--- 141
Query: 560 PPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKV 618
I+HRD+ NV ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 142 AGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGY---VATRWYRAPEIMLNWMHY 198
Query: 619 TEKCDVYSFGVLALEVIKGK 638
+ D++S G + E+++GK
Sbjct: 199 NQTVDIWSVGCIMAELLQGK 218
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 114/293 (38%), Gaps = 53/293 (18%)
Query: 444 IGKGGQGSVYKAE------LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHR-N 496
+G+G G V +A+ + VAVK + + + ++E+K L I H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLN 92
Query: 497 IVKFYGFCSHARHSF-IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVV------- 548
+V G C+ ++ E+ + G+L+ L +KR + V
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR----------SKRNEFVPYKVAPEDLYK 142
Query: 549 DALSYMHNDCFP-------------PIVHRDISSKNVLLDLENEAHVSDFGTAK--FLKP 593
D L+ H C+ +HRD++++N+LL +N + DFG A+ + P
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 202
Query: 594 DSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXX 652
D + ++APE + T + DV+SFGVL E+ G P
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 262
Query: 653 NLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLL 705
L+ M P TP + + + C P RPT ++ + L
Sbjct: 263 RLKEG-TRMRAPDYTTP---------EMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 10/171 (5%)
Query: 474 SEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAK 533
+E A +E + E + + + + IV+ G C A +V E G L L +
Sbjct: 49 TEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLV--GKRE 105
Query: 534 DLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKP 593
++ + ++ V + Y+ F VHRD++++NVLL + A +SDFG +K L
Sbjct: 106 EIPVSNVAELLHQVSMGMKYLEEKNF---VHRDLAARNVLLVNRHYAKISDFGLSKALGA 162
Query: 594 DSSNW-AELAGTY--GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 640
D S + A AG + + APE K + + DV+S+GV E + G+ P
Sbjct: 163 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 114/293 (38%), Gaps = 53/293 (18%)
Query: 444 IGKGGQGSVYKAE------LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHR-N 496
+G+G G V +A+ + VAVK + + + ++E+K L I H N
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLN 129
Query: 497 IVKFYGFCSHARHSF-IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVV------- 548
+V G C+ ++ E+ + G+L+ L +KR + V
Sbjct: 130 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR----------SKRNEFVPYKVAPEDLYK 179
Query: 549 DALSYMHNDCFP-------------PIVHRDISSKNVLLDLENEAHVSDFGTAK--FLKP 593
D L+ H C+ +HRD++++N+LL +N + DFG A+ + P
Sbjct: 180 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 239
Query: 594 DSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXX 652
D + ++APE + T + DV+SFGVL E+ G P
Sbjct: 240 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 299
Query: 653 NLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLL 705
L+ M P TP + + + C P RPT ++ + L
Sbjct: 300 RLKEG-TRMRAPDYTTP---------EMYQTMLDCWHGEPSQRPTFSELVEHL 342
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 97/217 (44%), Gaps = 24/217 (11%)
Query: 437 DFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQE---FLNEVKTLTGIR 493
DF+ IG+G G V +L + + V K + EM + E F E L
Sbjct: 75 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKW--EMLKRAETACFREERDVLVNGD 132
Query: 494 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSN--DAAAKDLGWTKRMNVIKGVV--D 549
+ I + + ++V +Y G L +LS D +++ R + + V+ D
Sbjct: 133 SKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMA---RFYLAEMVIAID 189
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELA-GTYGYV 608
++ +H VHRDI N+L+D+ ++DFG+ L D + + +A GT Y+
Sbjct: 190 SVHQLH------YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYI 243
Query: 609 APELAYTM-----KVTEKCDVYSFGVLALEVIKGKHP 640
+PE+ M + +CD +S GV E++ G+ P
Sbjct: 244 SPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 110/268 (41%), Gaps = 28/268 (10%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQ---QEFLNEVKTLTGIRHRNIVKF 500
+G+G GSV + L + ++K + + +SQ +EFL+E + H N+++
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 501 YGFCSHARHS-----FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVD---ALS 552
G C ++ +++ G L L ++K +VD +
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 553 YMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFG-TAKFLKPDSSNWAELAGT-YGYVAP 610
Y+ N F +HRD++++N +L + V+DFG + K D +A ++A
Sbjct: 162 YLSNRNF---LHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI 218
Query: 611 ELAYTMKVTEKCDVYSFGVLALEV-IKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTP 669
E T K DV++FGV E+ +G P N E+ + RL P
Sbjct: 219 ESLADRVYTSKSDVWAFGVTMWEIATRGMTP-------YPGVQNHEMYDYLLHGHRLKQP 271
Query: 670 SHNVQDKLISIMEVAISCLDESPESRPT 697
+D L + E+ SC P RPT
Sbjct: 272 ----EDCLDELYEIMYSCWRTDPLDRPT 295
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 114/293 (38%), Gaps = 53/293 (18%)
Query: 444 IGKGGQGSVYKAE------LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHR-N 496
+G+G G V +A+ + VAVK + + + ++E+K L I H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLN 92
Query: 497 IVKFYGFCSHARHSF-IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVV------- 548
+V G C+ ++ E+ + G+L+ L +KR + V
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR----------SKRNEFVPYKVAPEDLYK 142
Query: 549 DALSYMHNDCFP-------------PIVHRDISSKNVLLDLENEAHVSDFGTAK--FLKP 593
D L+ H C+ +HRD++++N+LL +N + DFG A+ + P
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 202
Query: 594 DSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXX 652
D + ++APE + T + DV+SFGVL E+ G P
Sbjct: 203 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 262
Query: 653 NLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLL 705
L+ M P TP + + + C P RPT ++ + L
Sbjct: 263 RLKEG-TRMRAPDYTTP---------EMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 433 RVTNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTG 491
R DF + IG GG G V+KA+ G+ +K+ +E A + EVK L
Sbjct: 8 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRV--KYNNEKAER-----EVKALAK 60
Query: 492 IRHRNIVKFYGFC-----------------SHARHSFIVYEYLEMGSLAMILSNDAAAKD 534
+ H NIV + G C S + FI E+ + G+L + K
Sbjct: 61 LDHVNIVHYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK- 118
Query: 535 LGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPD 594
L + + + + + Y+H+ +++RD+ N+ L + + DFG LK D
Sbjct: 119 LDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND 175
Query: 595 SSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVI 635
GT Y++PE + ++ D+Y+ G++ E++
Sbjct: 176 GKR-XRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 119/281 (42%), Gaps = 36/281 (12%)
Query: 444 IGKGGQGSVYKA---ELPSGEI---VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNI 497
+G+G G VY+ ++ GE VAVK + + + + EFLNE + G ++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHV 83
Query: 498 VKFYGFCSHARHSFIVYEYLEMGSLAMIL-------SNDAAAKDLGWTKRMNVIKGVVDA 550
V+ G S + + +V E + G L L N+ + + + + D
Sbjct: 84 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 143
Query: 551 LSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT----YG 606
++Y++ F VHR+++++N ++ + + DFG + + +++ G
Sbjct: 144 MAYLNAKKF---VHRNLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVR 198
Query: 607 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPR 665
++APE T D++SFGV+ E+ + P + E L ++D
Sbjct: 199 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP--------YQGLSNEQVLKFVMDGG 250
Query: 666 LPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
N +++ +M + C +P RPT ++ LLK
Sbjct: 251 YLDQPDNCPERVTDLMRM---CWQFNPNMRPTFLEIVNLLK 288
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 119/281 (42%), Gaps = 36/281 (12%)
Query: 444 IGKGGQGSVYKA---ELPSGEI---VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNI 497
+G+G G VY+ ++ GE VAVK + + + + EFLNE + G ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHV 82
Query: 498 VKFYGFCSHARHSFIVYEYLEMGSLAMIL-------SNDAAAKDLGWTKRMNVIKGVVDA 550
V+ G S + + +V E + G L L N+ + + + + D
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 551 LSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT----YG 606
++Y++ F VHR+++++N ++ + + DFG + + +++ G
Sbjct: 143 MAYLNAKKF---VHRNLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVR 197
Query: 607 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPR 665
++APE T D++SFGV+ E+ + P + E L ++D
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP--------YQGLSNEQVLKFVMDGG 249
Query: 666 LPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
N +++ +M + C +P RPT ++ LLK
Sbjct: 250 YLDQPDNCPERVTDLMRM---CWQFNPNMRPTFLEIVNLLK 287
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 89 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + FG A+ + + + T Y APE+ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 201
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 114/293 (38%), Gaps = 53/293 (18%)
Query: 444 IGKGGQGSVYKAE------LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHR-N 496
+G+G G V +A+ + VAVK + + + ++E+K L I H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLN 83
Query: 497 IVKFYGFCSHARHSF-IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVV------- 548
+V G C+ ++ E+ + G+L+ L +KR + V
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLR----------SKRNEFVPYKVAPEDLYK 133
Query: 549 DALSYMHNDCFP-------------PIVHRDISSKNVLLDLENEAHVSDFGTAK--FLKP 593
D L+ H C+ +HRD++++N+LL +N + DFG A+ + P
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 193
Query: 594 DSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXX 652
D + ++APE + T + DV+SFGVL E+ G P
Sbjct: 194 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 253
Query: 653 NLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLL 705
L+ M P TP + + + C P RPT ++ + L
Sbjct: 254 RLKEG-TRMRAPDYTTP---------EMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 117/280 (41%), Gaps = 25/280 (8%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIV----AVKKFHSPLPSEMASQQEFLNEVKTLT 490
+F + G G+VYK +P GE V A+K+ + + +E L+E +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMA 79
Query: 491 GIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD-LGWTKRMNVIKGVVD 549
+ + ++ + G C + I ++ +L KD +G +N +
Sbjct: 80 SVDNPHVCRLLGICLTSTVQLIT----QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 135
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GY 607
++Y+ + +VHRD++++NVL+ ++DFG AK L + + G +
Sbjct: 136 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRL 666
+A E T + DV+S+GV E++ G P D EI+ RL
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-------EISSILEKGERL 245
Query: 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P P D + +++ + D P+ R I + S++ +
Sbjct: 246 PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 285
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 109/266 (40%), Gaps = 19/266 (7%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI--- 492
DFD IG+G V L + + K + E+ + E ++ V+T +
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKV---VKKELVNDDEDIDWVQTEKHVFEQ 76
Query: 493 --RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDA 550
H +V + F V EY+ G L + + L + A
Sbjct: 77 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLA 133
Query: 551 LSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKF-LKPDSSNWAELAGTYGYVA 609
L+Y+H I++RD+ NVLLD E ++D+G K L+P + + GT Y+A
Sbjct: 134 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTPNYIA 189
Query: 610 PELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTP 669
PE+ D ++ GVL E++ G+ P D N E L +++ +
Sbjct: 190 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI 249
Query: 670 SHNVQDKLISIMEVAISCLDESPESR 695
++ K S+++ S L++ P+ R
Sbjct: 250 PRSMSVKAASVLK---SFLNKDPKER 272
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 126/296 (42%), Gaps = 59/296 (19%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELPSGEI---VAVKKFHSPLPSEMASQ---QEFLNEVKTL 489
ND + IG+G G V KA + + A+K+ E AS+ ++F E++ L
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRM-----KEYASKDDHRDFAGELEVL 69
Query: 490 TGIRHR-NIVKFYGFCSHARHSFIVYEYLEMGSL------AMILSNDAA-------AKDL 535
+ H NI+ G C H + ++ EY G+L + +L D A A L
Sbjct: 70 CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 129
Query: 536 GWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDS 595
+ ++ V + Y+ F +HRD++++N+L+ A ++DFG ++
Sbjct: 130 SSQQLLHFAADVARGMDYLSQKQF---IHRDLAARNILVGENYVAKIADFGLSR------ 180
Query: 596 SNWAELAGTYG-----YVAPE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXX 648
+ T G ++A E L Y++ T DV+S+GVL E++ G P
Sbjct: 181 GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNS-DVWSYGVLLWEIVSLGGTP-------- 231
Query: 649 XXXXNLEIA-LNEMLDP--RLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKV 701
+ A L E L RL P N D++ +M C E P RP+ ++
Sbjct: 232 --YCGMTCAELYEKLPQGYRLEKPL-NCDDEVYDLMR---QCWREKPYERPSFAQI 281
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 10/171 (5%)
Query: 474 SEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAK 533
+E A +E + E + + + + IV+ G C A +V E G L L +
Sbjct: 375 TEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKR--E 431
Query: 534 DLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKP 593
++ + ++ V + Y+ F VHR+++++NVLL + A +SDFG +K L
Sbjct: 432 EIPVSNVAELLHQVSMGMKYLEEKNF---VHRNLAARNVLLVNRHYAKISDFGLSKALGA 488
Query: 594 DSSNW-AELAGTY--GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 640
D S + A AG + + APE K + + DV+S+GV E + G+ P
Sbjct: 489 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 539
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 117/280 (41%), Gaps = 25/280 (8%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIV----AVKKFHSPLPSEMASQQEFLNEVKTLT 490
+F + G G+VYK +P GE V A+K+ + + +E L+E +
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMA 72
Query: 491 GIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKD-LGWTKRMNVIKGVVD 549
+ + ++ + G C + I ++ +L KD +G +N +
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLIT----QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTY--GY 607
++Y+ + +VHRD++++NVL+ ++DFG AK L + + G +
Sbjct: 129 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRL 666
+A E T + DV+S+GV E++ G P D EI+ RL
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-------EISSILEKGERL 238
Query: 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
P P D + +++ + D P+ R I + S++ +
Sbjct: 239 PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 93/219 (42%), Gaps = 10/219 (4%)
Query: 425 KIVYEEIIRVTNDFDDEHCIGKGGQGSVYKAELPSGEI-VAVKKFHSPLPSEMASQQEFL 483
++V ++ V + + IG+G G V A ++ VA+KK SP + Q+ L
Sbjct: 32 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRT-L 89
Query: 484 NEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNV 543
E+K L RH NI+ + YL + L + L
Sbjct: 90 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYF 149
Query: 544 IKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN---WAE 600
+ ++ L Y+H+ ++HRD+ N+LL+ + + DFG A+ PD + E
Sbjct: 150 LYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE 206
Query: 601 LAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGK 638
T Y APE+ K T+ D++S G + E++ +
Sbjct: 207 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 76/159 (47%), Gaps = 12/159 (7%)
Query: 485 EVKTLTGIRHRNIVKF-YGFCSHARHSFIVYEYLEMGSLAMILSNDA--AAKDLGWTKRM 541
E L + H IVK Y F + + +++ ++L G L LS + +D+ +
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTEEDVKF---- 130
Query: 542 NVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAEL 601
+ + AL ++H+ I++RD+ +N+LLD E ++DFG +K
Sbjct: 131 -YLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 186
Query: 602 AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
GT Y+APE+ T+ D +SFGVL E++ G P
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 114/293 (38%), Gaps = 53/293 (18%)
Query: 444 IGKGGQGSVYKAE------LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHR-N 496
+G+G G V +A+ + VAVK + + + ++E+K L I H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLN 83
Query: 497 IVKFYGFCSHARHSF-IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVV------- 548
+V G C+ ++ E+ + G+L+ L +KR + V
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLR----------SKRNEFVPYKVAPEDLYK 133
Query: 549 DALSYMHNDCFP-------------PIVHRDISSKNVLLDLENEAHVSDFGTAK--FLKP 593
D L+ H C+ +HRD++++N+LL +N + DFG A+ + P
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 193
Query: 594 DSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXX 652
D + ++APE + T + DV+SFGVL E+ G P
Sbjct: 194 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 253
Query: 653 NLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLL 705
L+ M P TP + + + C P RPT ++ + L
Sbjct: 254 RLKEG-TRMRAPDYTTP---------EMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 103/229 (44%), Gaps = 38/229 (16%)
Query: 441 EHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLT-GIRHRNIVK 499
E +G G G+V G VAVK+ ++A L E+K LT H N+++
Sbjct: 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF-CDIA-----LMEIKLLTESDDHPNVIR 73
Query: 500 FYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMN---VIKGVVDALSYMHN 556
+Y + R +I E + ++ S + + ++L K N +++ + ++++H+
Sbjct: 74 YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 133
Query: 557 DCFPPIVHRDISSKNVLL--------DLENEAH-----VSDFGTAKFLKPDSS----NWA 599
I+HRD+ +N+L+ D + A +SDFG K L S N
Sbjct: 134 ---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLN 190
Query: 600 ELAGTYGYVAPE-------LAYTMKVTEKCDVYSFGVLALEVI-KGKHP 640
+GT G+ APE L ++T D++S G + ++ KGKHP
Sbjct: 191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 76/159 (47%), Gaps = 12/159 (7%)
Query: 485 EVKTLTGIRHRNIVKF-YGFCSHARHSFIVYEYLEMGSLAMILSNDA--AAKDLGWTKRM 541
E L + H IVK Y F + + +++ ++L G L LS + +D+ +
Sbjct: 77 ERDILVEVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTEEDVKF---- 131
Query: 542 NVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAEL 601
+ + AL ++H+ I++RD+ +N+LLD E ++DFG +K
Sbjct: 132 -YLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 187
Query: 602 AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
GT Y+APE+ T+ D +SFGVL E++ G P
Sbjct: 188 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 76/159 (47%), Gaps = 12/159 (7%)
Query: 485 EVKTLTGIRHRNIVKF-YGFCSHARHSFIVYEYLEMGSLAMILSNDA--AAKDLGWTKRM 541
E L + H IVK Y F + + +++ ++L G L LS + +D+ +
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTEEDVKF---- 130
Query: 542 NVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAEL 601
+ + AL ++H+ I++RD+ +N+LLD E ++DFG +K
Sbjct: 131 -YLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 186
Query: 602 AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
GT Y+APE+ T+ D +SFGVL E++ G P
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 34/225 (15%)
Query: 441 EHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLT-GIRHRNIVK 499
E +G G G+V G VAVK+ ++A L E+K LT H N+++
Sbjct: 38 EKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF-CDIA-----LMEIKLLTESDDHPNVIR 91
Query: 500 FYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMN---VIKGVVDALSYMHN 556
+Y + R +I E + ++ S + + ++L K N +++ + ++++H+
Sbjct: 92 YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 151
Query: 557 DCFPPIVHRDISSKNVLL--------DLENEAH-----VSDFGTAKFLKPDS----SNWA 599
I+HRD+ +N+L+ D + A +SDFG K L N
Sbjct: 152 ---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 208
Query: 600 ELAGTYGYVAPEL---AYTMKVTEKCDVYSFGVLALEVI-KGKHP 640
+GT G+ APEL + ++T D++S G + ++ KGKHP
Sbjct: 209 NPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHP 253
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 89 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + D G A+ + + + T Y APE+ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 201
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 126/296 (42%), Gaps = 59/296 (19%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELPSGEI---VAVKKFHSPLPSEMASQ---QEFLNEVKTL 489
ND + IG+G G V KA + + A+K+ E AS+ ++F E++ L
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRM-----KEYASKDDHRDFAGELEVL 79
Query: 490 TGIRHR-NIVKFYGFCSHARHSFIVYEYLEMGSL------AMILSNDAA-------AKDL 535
+ H NI+ G C H + ++ EY G+L + +L D A A L
Sbjct: 80 CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 139
Query: 536 GWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDS 595
+ ++ V + Y+ F +HRD++++N+L+ A ++DFG ++
Sbjct: 140 SSQQLLHFAADVARGMDYLSQKQF---IHRDLAARNILVGENYVAKIADFGLSR------ 190
Query: 596 SNWAELAGTYG-----YVAPE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXX 648
+ T G ++A E L Y++ T DV+S+GVL E++ G P
Sbjct: 191 GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNS-DVWSYGVLLWEIVSLGGTP-------- 241
Query: 649 XXXXNLEIA-LNEMLDP--RLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKV 701
+ A L E L RL P N D++ +M C E P RP+ ++
Sbjct: 242 --YCGMTCAELYEKLPQGYRLEKPL-NCDDEVYDLMR---QCWREKPYERPSFAQI 291
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 89 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + D G A+ + + + T Y APE+ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 201
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 34/225 (15%)
Query: 441 EHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLT-GIRHRNIVK 499
E +G G G+V G VAVK+ ++A L E+K LT H N+++
Sbjct: 38 EKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF-CDIA-----LMEIKLLTESDDHPNVIR 91
Query: 500 FYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMN---VIKGVVDALSYMHN 556
+Y + R +I E + ++ S + + ++L K N +++ + ++++H+
Sbjct: 92 YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 151
Query: 557 DCFPPIVHRDISSKNVLL--------DLENEAH-----VSDFGTAKFLKPDS----SNWA 599
I+HRD+ +N+L+ D + A +SDFG K L N
Sbjct: 152 ---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 208
Query: 600 ELAGTYGYVAPEL---AYTMKVTEKCDVYSFGVLALEVI-KGKHP 640
+GT G+ APEL + ++T D++S G + ++ KGKHP
Sbjct: 209 NPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHP 253
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 122/274 (44%), Gaps = 36/274 (13%)
Query: 444 IGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVK-TLTGIRHRNIVKFY 501
+G+G G V K +PSG+I+AVK+ + + S+ Q+ L ++ ++ + V FY
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQ--EQKRLLMDLDISMRTVDCPFTVTFY 116
Query: 502 GFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIK----GVVDALSYMHND 557
G +I E ++ SL D G T +++ +V AL ++H+
Sbjct: 117 GALFREGDVWICMELMDT-SLDKFYKQ---VIDKGQTIPEDILGKIAVSIVKALEHLHSK 172
Query: 558 CFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPEL----- 612
++HRD+ NVL++ + + DFG + +L DS AG Y+APE
Sbjct: 173 L--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV-DSVAKTIDAGCKPYMAPERINPEL 229
Query: 613 ---AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTP 669
Y++ K D++S G+ +E+ + P D L+ + E P+LP
Sbjct: 230 NQKGYSV----KSDIWSLGITMIELAILRFPYD---SWGTPFQQLKQVVEEP-SPQLPAD 281
Query: 670 SHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703
+ + ++ CL ++ + RPT ++ Q
Sbjct: 282 KFSAE-----FVDFTSQCLKKNSKERPTYPELMQ 310
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 114/293 (38%), Gaps = 53/293 (18%)
Query: 444 IGKGGQGSVYKAE------LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHR-N 496
+G+G G V +A+ + VAVK + + + ++E+K L I H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLN 92
Query: 497 IVKFYGFCSHARHSF-IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVV------- 548
+V G C+ ++ E+ + G+L+ L +KR + V
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR----------SKRNEFVPYKVAPEDLYK 142
Query: 549 DALSYMHNDCFP-------------PIVHRDISSKNVLLDLENEAHVSDFGTAKFL--KP 593
D L+ H C+ +HRD++++N+LL +N + DFG A+ + P
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDP 202
Query: 594 DSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXX 652
D + ++APE + T + DV+SFGVL E+ G P
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 262
Query: 653 NLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLL 705
L+ M P TP + + + C P RPT ++ + L
Sbjct: 263 RLKEG-TRMRAPDYTTP---------EMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 114/294 (38%), Gaps = 55/294 (18%)
Query: 444 IGKGGQGSVYKAE------LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHR-N 496
+G+G G V +A+ + VAVK + + + ++E+K L I H N
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLN 94
Query: 497 IVKFYGFCSHARHSF-IVYEYLEMGSLAMILSND--------AAAKDLGWTKRMNVIKGV 547
+V G C+ ++ E+ + G+L+ L + A +DL
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDL-----------Y 143
Query: 548 VDALSYMHNDCFP-------------PIVHRDISSKNVLLDLENEAHVSDFGTAK--FLK 592
D L+ H C+ +HRD++++N+LL +N + DFG A+ +
Sbjct: 144 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 203
Query: 593 PDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXX 651
PD + ++APE + T + DV+SFGVL E+ G P
Sbjct: 204 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 263
Query: 652 XNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLL 705
L+ M P TP + + + C P RPT ++ + L
Sbjct: 264 RRLKEG-TRMRAPDYTTP---------EMYQTMLDCWHGEPSQRPTFSELVEHL 307
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 114/293 (38%), Gaps = 53/293 (18%)
Query: 444 IGKGGQGSVYKAE------LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHR-N 496
+G+G G V +A+ + VAVK + + + ++E+K L I H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLN 83
Query: 497 IVKFYGFCSHARHSF-IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVV------- 548
+V G C+ ++ E+ + G+L+ L +KR + V
Sbjct: 84 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR----------SKRNEFVPYKVAPEDLYK 133
Query: 549 DALSYMHNDCFP-------------PIVHRDISSKNVLLDLENEAHVSDFGTAKFL--KP 593
D L+ H C+ +HRD++++N+LL +N + DFG A+ + P
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDP 193
Query: 594 DSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXX 652
D + ++APE + T + DV+SFGVL E+ G P
Sbjct: 194 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 253
Query: 653 NLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLL 705
L+ M P TP + + + C P RPT ++ + L
Sbjct: 254 RLKEG-TRMRAPDYTTP---------EMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV A + +G VAVKK P S + +++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ AR S + YL + L+N + L +I ++ L Y+H+
Sbjct: 89 VFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 144
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + D G A+ + + + T Y APE+ M
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 201
Query: 620 EKCDVYSFGVLALEVIKGK 638
+ D++S G + E++ G+
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 23/223 (10%)
Query: 484 NEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSL--AMILSNDAAAKDLGWTKRM 541
NE+ L I+H NIV H ++V + + G L ++ KD
Sbjct: 55 NEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL---- 110
Query: 542 NVIKGVVDALSYMHNDCFPPIVHRDISSKNVLL---DLENEAHVSDFGTAKFLKPDSSNW 598
VI+ V+ A+ Y+H + IVHRD+ +N+L + ++ ++DFG +K + +
Sbjct: 111 -VIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMST 166
Query: 599 AELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIAL 658
A GT GYVAPE+ ++ D +S GV+ ++ G +P + ++
Sbjct: 167 A--CGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG-YPPFYEETESKLFEKIKEGY 223
Query: 659 NEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKV 701
E P S + +D + ++E + P R T +K
Sbjct: 224 YEFESPFWDDISESAKDFICHLLE-------KDPNERYTCEKA 259
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 114/293 (38%), Gaps = 53/293 (18%)
Query: 444 IGKGGQGSVYKAE------LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHR-N 496
+G+G G V +A+ + VAVK + + + ++E+K L I H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLN 83
Query: 497 IVKFYGFCSHARHSF-IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVV------- 548
+V G C+ ++ E+ + G+L+ L +KR + V
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLR----------SKRNEFVPYKVAPEDLYK 133
Query: 549 DALSYMHNDCFP-------------PIVHRDISSKNVLLDLENEAHVSDFGTAKFL--KP 593
D L+ H C+ +HRD++++N+LL +N + DFG A+ + P
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDP 193
Query: 594 DSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXX 652
D + ++APE + T + DV+SFGVL E+ G P
Sbjct: 194 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 253
Query: 653 NLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLL 705
L+ M P TP + + + C P RPT ++ + L
Sbjct: 254 RLKEG-TRMRAPDYTTP---------EMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 109/266 (40%), Gaps = 19/266 (7%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI--- 492
DFD IG+G V L + + + + E+ + E ++ V+T +
Sbjct: 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRV---VKKELVNDDEDIDWVQTEKHVFEQ 108
Query: 493 --RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDA 550
H +V + F V EY+ G L + + L + A
Sbjct: 109 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLA 165
Query: 551 LSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKF-LKPDSSNWAELAGTYGYVA 609
L+Y+H I++RD+ NVLLD E ++D+G K L+P + + GT Y+A
Sbjct: 166 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-STFCGTPNYIA 221
Query: 610 PELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTP 669
PE+ D ++ GVL E++ G+ P D N E L +++ +
Sbjct: 222 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI 281
Query: 670 SHNVQDKLISIMEVAISCLDESPESR 695
++ K S+++ S L++ P+ R
Sbjct: 282 PRSLSVKAASVLK---SFLNKDPKER 304
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 118/285 (41%), Gaps = 38/285 (13%)
Query: 444 IGKGGQGSVYKAEL------PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNI 497
+G+ G VYK L + VA+K +E ++EF +E ++H N+
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDK--AEGPLREEFRHEAMLRARLQHPNV 91
Query: 498 VKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHND 557
V G + + +++ Y G L L + D+G T +K ++ ++H
Sbjct: 92 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 151
Query: 558 CFPP----------IVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT--- 604
+VH+D++++NVL+ + +SD G F + ++++ +L G
Sbjct: 152 AQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGL--FREVYAADYYKLLGNSLL 209
Query: 605 -YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLD 663
++APE K + D++S+GV+ EV + N ++ EM+
Sbjct: 210 PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS------YGLQPYCGYSNQDVV--EMIR 261
Query: 664 PR--LPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
R LP P D + + I C +E P RP + + L+
Sbjct: 262 NRQVLPCPD----DCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 302
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 116/286 (40%), Gaps = 40/286 (13%)
Query: 444 IGKGGQGSVYKAE------LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHR-N 496
+G+G G V +A+ + VAVK + + + ++E+K L I H N
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLN 93
Query: 497 IVKFYGFCSHARHSF-IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMH 555
+V G C+ ++ E+ + G+L+ L + + + + ++ K D L+ H
Sbjct: 94 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS-KRNEFVPYKTPEDLYK---DFLTLEH 149
Query: 556 NDCFP-------------PIVHRDISSKNVLLDLENEAHVSDFGTAKFL--KPDSSNWAE 600
C+ +HRD++++N+LL +N + DFG A+ + PD +
Sbjct: 150 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 601 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALN 659
++APE + T + DV+SFGVL E+ G P L+
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG-T 268
Query: 660 EMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLL 705
M P TP + + + C P RPT ++ + L
Sbjct: 269 RMRAPDYTTP---------EMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 118/285 (41%), Gaps = 38/285 (13%)
Query: 444 IGKGGQGSVYKAEL------PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNI 497
+G+ G VYK L + VA+K +E ++EF +E ++H N+
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDK--AEGPLREEFRHEAMLRARLQHPNV 74
Query: 498 VKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHND 557
V G + + +++ Y G L L + D+G T +K ++ ++H
Sbjct: 75 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134
Query: 558 CFPP----------IVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT--- 604
+VH+D++++NVL+ + +SD G F + ++++ +L G
Sbjct: 135 AQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGL--FREVYAADYYKLLGNSLL 192
Query: 605 -YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLD 663
++APE K + D++S+GV+ EV + N ++ EM+
Sbjct: 193 PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS------YGLQPYCGYSNQDVV--EMIR 244
Query: 664 PR--LPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
R LP P D + + I C +E P RP + + L+
Sbjct: 245 NRQVLPCPD----DCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 285
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 127/295 (43%), Gaps = 54/295 (18%)
Query: 444 IGKGGQGSVYKA------ELPSGEIVAVKKFHSPLPSEMASQQE-FLNEVKTLTGI-RHR 495
+G G G V +A + + VAVK PS +++E ++E+K L+ + H
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK---PSAHLTEREALMSELKVLSYLGNHM 110
Query: 496 NIVKFYGFCSHARHSFIVYEYLEMGSL---------AMILSNDAAA----------KDLG 536
NIV G C+ + ++ EY G L + I S + A +
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 537 WTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSS 596
+ V KG+ S +C +HRD++++N+LL + DFG A+ +K DS+
Sbjct: 171 LSFSYQVAKGMAFLAS---KNC----IHRDLAARNILLTHGRITKICDFGLARHIKNDSN 223
Query: 597 NWAELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXN 653
+ ++APE + T + DV+S+G+ E+ G P
Sbjct: 224 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP--------YPGMP 275
Query: 654 LEIALNEMLDP--RLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
++ +M+ R+ +P H ++ IM+ +C D P RPT +++ QL++
Sbjct: 276 VDSKFYKMIKEGFRMLSPEH-APAEMYDIMK---TCWDADPLKRPTFKQIVQLIE 326
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 99/211 (46%), Gaps = 11/211 (5%)
Query: 434 VTNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI 492
+T+++ IGKG V + +L +G A K ++ S Q+ E + +
Sbjct: 2 MTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLS-ARDHQKLEREARICRLL 60
Query: 493 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALS 552
+H NIV+ + S ++V++ + G L + A + + I+ +++A+
Sbjct: 61 KHSNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEAVL 117
Query: 553 YMHNDCFPPIVHRDISSKNVLLDLENEA---HVSDFGTAKFLKPDSSNWAELAGTYGYVA 609
+ H +VHRD+ +N+LL + + ++DFG A ++ D W AGT GY++
Sbjct: 118 HCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLS 174
Query: 610 PELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
PE+ + D+++ GV+ ++ G P
Sbjct: 175 PEVLRKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 88/217 (40%), Gaps = 24/217 (11%)
Query: 434 VTNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI 492
N F +GKGG G V ++ +G++ A KK + + LNE + L +
Sbjct: 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV 241
Query: 493 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAK-------DLGWTKRMNVIK 545
R +V YE + L + L N K G+ + V
Sbjct: 242 NSRFVVSLA----------YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY 291
Query: 546 G--VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG 603
+ L +H + IV+RD+ +N+LLD +SD G A + P+ G
Sbjct: 292 AAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHV-PEGQTIKGRVG 347
Query: 604 TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
T GY+APE+ + T D ++ G L E+I G+ P
Sbjct: 348 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 126/295 (42%), Gaps = 54/295 (18%)
Query: 444 IGKGGQGSVYKA------ELPSGEIVAVKKFHSPLPSEMASQQE-FLNEVKTLTGI-RHR 495
+G G G V +A + + VAVK PS +++E ++E+K L+ + H
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK---PSAHLTEREALMSELKVLSYLGNHM 87
Query: 496 NIVKFYGFCSHARHSFIVYEYLEMGSL---------AMILSNDAAA----------KDLG 536
NIV G C+ + ++ EY G L + I S + A +
Sbjct: 88 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 147
Query: 537 WTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSS 596
+ V KG+ S +C +HRD++++N+LL + DFG A+ +K DS+
Sbjct: 148 LSFSYQVAKGMAFLAS---KNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSN 200
Query: 597 NWAELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXN 653
+ ++APE + T + DV+S+G+ E+ G P
Sbjct: 201 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP--------YPGMP 252
Query: 654 LEIALNEMLDP--RLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
++ +M+ R+ +P H + + ++ +C D P RPT +++ QL++
Sbjct: 253 VDSKFYKMIKEGFRMLSPEHAPAE----MYDIMKTCWDADPLKRPTFKQIVQLIE 303
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 88/217 (40%), Gaps = 24/217 (11%)
Query: 434 VTNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI 492
N F +GKGG G V ++ +G++ A KK + + LNE + L +
Sbjct: 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV 241
Query: 493 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAK-------DLGWTKRMNVIK 545
R +V YE + L + L N K G+ + V
Sbjct: 242 NSRFVVSLA----------YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY 291
Query: 546 G--VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG 603
+ L +H + IV+RD+ +N+LLD +SD G A + P+ G
Sbjct: 292 AAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHV-PEGQTIKGRVG 347
Query: 604 TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
T GY+APE+ + T D ++ G L E+I G+ P
Sbjct: 348 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 112/262 (42%), Gaps = 34/262 (12%)
Query: 463 VAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGFCSHARHSFIVYEYLEMGS 521
VAVK S ++ ++ ++E+K ++ + +H NIV G C+H ++ EY G
Sbjct: 79 VAVKMLKSTAHAD--EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 522 LAMILSNDAA-------------AKDLGWTKRMNVIKGVVDALSYMHN-DCFPPIVHRDI 567
L L + L ++ V ++++ + +C +HRD+
Sbjct: 137 LLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNC----IHRDV 192
Query: 568 SSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT--YGYVAPELAYTMKVTEKCDVY 625
+++NVLL + A + DFG A+ + DS+ + ++APE + T + DV+
Sbjct: 193 AARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVW 252
Query: 626 SFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISIMEVA 684
S+G+L E+ G +P ++ +M P + SIM+
Sbjct: 253 SYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGY-QMAQPAF------APKNIYSIMQ-- 303
Query: 685 ISCLDESPESRPTIQKVSQLLK 706
+C P RPT Q++ L+
Sbjct: 304 -ACWALEPTHRPTFQQICSFLQ 324
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 20/205 (9%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IG+G G V A + VA+KK SP + Q+ L E++ L RH N++
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKI-SPFEHQTYCQRT-LREIQILLRFRHENVIGIRD 108
Query: 503 FCSHA-----RHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHND 557
+ R +IV + +E ++ S + + + + ++ L Y+H+
Sbjct: 109 ILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICY-----FLYQILRGLKYIHS- 162
Query: 558 CFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN---WAELAGTYGYVAPELAY 614
++HRD+ N+L++ + + DFG A+ P+ + E T Y APE+
Sbjct: 163 --ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIML 220
Query: 615 TMK-VTEKCDVYSFGVLALEVIKGK 638
K T+ D++S G + E++ +
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 98/213 (46%), Gaps = 13/213 (6%)
Query: 433 RVTNDFDDEHCIGKGGQGSVYKA--ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLT 490
R T+D+ +GKG V + + P+ E A K + Q+ E +
Sbjct: 28 RFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAA--KIINTKKLSARDHQKLEREARICR 85
Query: 491 GIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDA 550
++H NIV+ + S ++V++ + G L + A + + I ++++
Sbjct: 86 LLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIHQILES 142
Query: 551 LSYMHNDCFPPIVHRDISSKNVLLDLENEA---HVSDFGTAKFLKPDSSNWAELAGTYGY 607
++++H IVHRD+ +N+LL + + ++DFG A ++ + W AGT GY
Sbjct: 143 VNHIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGY 199
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
++PE+ + D+++ GV+ ++ G P
Sbjct: 200 LSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%)
Query: 562 IVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEK 621
I++RD+ NV+LD E ++DFG K D E GT Y+APE+ +
Sbjct: 141 IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKS 200
Query: 622 CDVYSFGVLALEVIKGKHPRD 642
D +++GVL E++ G+ P D
Sbjct: 201 VDWWAYGVLLYEMLAGQPPFD 221
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 102/248 (41%), Gaps = 15/248 (6%)
Query: 438 FDDEHCIGKGGQGSVYKAE----LPSGEIVAVKKFHSPLPSEMASQQEFLN-EVKTLTGI 492
F+ +GKGG G V++ +G+I A+K + A E L +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 493 RHRNIVKF-YGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDAL 551
+H IV Y F + + +++ EYL G L M L + + + + AL
Sbjct: 79 KHPFIVDLIYAFQTGGK-LYLILEYLSGGELFMQLEREGIFME---DTACFYLAEISMAL 134
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPE 611
++H I++RD+ +N++L+ + ++DFG K D + GT Y+APE
Sbjct: 135 GHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPE 191
Query: 612 LAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSH 671
+ D +S G L +++ G P L+ LN L P L +
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN--LPPYLTQEAR 249
Query: 672 NVQDKLIS 679
++ KL+
Sbjct: 250 DLLKKLLK 257
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 126/295 (42%), Gaps = 54/295 (18%)
Query: 444 IGKGGQGSVYKA------ELPSGEIVAVKKFHSPLPSEMASQQE-FLNEVKTLTGI-RHR 495
+G G G V +A + + VAVK PS +++E ++E+K L+ + H
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK---PSAHLTEREALMSELKVLSYLGNHM 105
Query: 496 NIVKFYGFCSHARHSFIVYEYLEMGSL---------AMILSNDAAA----------KDLG 536
NIV G C+ + ++ EY G L + I S + A +
Sbjct: 106 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 165
Query: 537 WTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSS 596
+ V KG+ S +C +HRD++++N+LL + DFG A+ +K DS+
Sbjct: 166 LSFSYQVAKGMAFLAS---KNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSN 218
Query: 597 NWAELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXN 653
+ ++APE + T + DV+S+G+ E+ G P
Sbjct: 219 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP--------YPGMP 270
Query: 654 LEIALNEMLDP--RLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
++ +M+ R+ +P H + + ++ +C D P RPT +++ QL++
Sbjct: 271 VDSKFYKMIKEGFRMLSPEHAPAE----MYDIMKTCWDADPLKRPTFKQIVQLIE 321
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 102/248 (41%), Gaps = 15/248 (6%)
Query: 438 FDDEHCIGKGGQGSVYKAE----LPSGEIVAVKKFHSPLPSEMASQQEFLN-EVKTLTGI 492
F+ +GKGG G V++ +G+I A+K + A E L +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 493 RHRNIVKF-YGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDAL 551
+H IV Y F + + +++ EYL G L M L + + + + AL
Sbjct: 79 KHPFIVDLIYAFQTGGK-LYLILEYLSGGELFMQLEREGIFME---DTACFYLAEISMAL 134
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPE 611
++H I++RD+ +N++L+ + ++DFG K D + GT Y+APE
Sbjct: 135 GHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPE 191
Query: 612 LAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSH 671
+ D +S G L +++ G P L+ LN L P L +
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN--LPPYLTQEAR 249
Query: 672 NVQDKLIS 679
++ KL+
Sbjct: 250 DLLKKLLK 257
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 127/295 (43%), Gaps = 54/295 (18%)
Query: 444 IGKGGQGSVYKA------ELPSGEIVAVKKFHSPLPSEMASQQE-FLNEVKTLTGI-RHR 495
+G G G V +A + + VAVK PS +++E ++E+K L+ + H
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK---PSAHLTEREALMSELKVLSYLGNHM 103
Query: 496 NIVKFYGFCSHARHSFIVYEYLEMGSL---------AMILSNDAAA----------KDLG 536
NIV G C+ + ++ EY G L + I S + A +
Sbjct: 104 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 163
Query: 537 WTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSS 596
+ V KG+ S +C +HRD++++N+LL + DFG A+ +K DS+
Sbjct: 164 LSFSYQVAKGMAFLAS---KNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSN 216
Query: 597 NWAELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXN 653
+ ++APE + T + DV+S+G+ E+ G P
Sbjct: 217 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP--------YPGMP 268
Query: 654 LEIALNEMLDP--RLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
++ +M+ R+ +P H ++ IM+ +C D P RPT +++ QL++
Sbjct: 269 VDSKFYKMIKEGFRMLSPEH-APAEMYDIMK---TCWDADPLKRPTFKQIVQLIE 319
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 119/278 (42%), Gaps = 44/278 (15%)
Query: 444 IGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNI----- 497
+G+G G V K +PSG+I AVK+ + + S+ Q+ L ++ I R +
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQ--EQKRLLXDL----DISXRTVDCPFT 95
Query: 498 VKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIK----GVVDALSY 553
V FYG +I E L SL D G T +++ +V AL +
Sbjct: 96 VTFYGALFREGDVWICXE-LXDTSLDKFYKQ---VIDKGQTIPEDILGKIAVSIVKALEH 151
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPEL- 612
+H+ ++HRD+ NVL++ + DFG + +L D + + AG Y APE
Sbjct: 152 LHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDID-AGCKPYXAPERI 208
Query: 613 -------AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPR 665
Y++ K D++S G+ +E+ + P D L+ + E P+
Sbjct: 209 NPELNQKGYSV----KSDIWSLGITXIELAILRFPYD---SWGTPFQQLKQVVEEP-SPQ 260
Query: 666 LPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703
LP + + ++ CL ++ + RPT ++ Q
Sbjct: 261 LPADKFSAE-----FVDFTSQCLKKNSKERPTYPELXQ 293
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 127/295 (43%), Gaps = 54/295 (18%)
Query: 444 IGKGGQGSVYKA------ELPSGEIVAVKKFHSPLPSEMASQQE-FLNEVKTLTGI-RHR 495
+G G G V +A + + VAVK PS +++E ++E+K L+ + H
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK---PSAHLTEREALMSELKVLSYLGNHM 110
Query: 496 NIVKFYGFCSHARHSFIVYEYLEMGSL---------AMILSNDAAA----------KDLG 536
NIV G C+ + ++ EY G L + I S + A +
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 537 WTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSS 596
+ V KG+ S +C +HRD++++N+LL + DFG A+ +K DS+
Sbjct: 171 LSFSYQVAKGMAFLAS---KNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSN 223
Query: 597 NWAELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXN 653
+ ++APE + T + DV+S+G+ E+ G P
Sbjct: 224 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP--------YPGMP 275
Query: 654 LEIALNEMLDP--RLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
++ +M+ R+ +P H ++ IM+ +C D P RPT +++ QL++
Sbjct: 276 VDSKFYKMIKEGFRMLSPEH-APAEMYDIMK---TCWDADPLKRPTFKQIVQLIE 326
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 38/229 (16%)
Query: 441 EHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLT-GIRHRNIVK 499
E +G G G+V G VAVK+ ++A L E+K LT H N+++
Sbjct: 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF-CDIA-----LMEIKLLTESDDHPNVIR 73
Query: 500 FYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMN---VIKGVVDALSYMHN 556
+Y + R +I E + ++ S + + ++L K N +++ + ++++H+
Sbjct: 74 YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 133
Query: 557 DCFPPIVHRDISSKNVLL--------DLENEAH-----VSDFGTAKFLKPDS----SNWA 599
I+HRD+ +N+L+ D + A +SDFG K L N
Sbjct: 134 ---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 190
Query: 600 ELAGTYGYVAPE-------LAYTMKVTEKCDVYSFGVLALEVI-KGKHP 640
+GT G+ APE L ++T D++S G + ++ KGKHP
Sbjct: 191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 120/290 (41%), Gaps = 47/290 (16%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELPSGEI---VAVKKFHSPLPSEMASQ---QEFLNEVKTL 489
ND + IG+G G V KA + + A+K+ E AS+ ++F E++ L
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRM-----KEYASKDDHRDFAGELEVL 76
Query: 490 TGIRHR-NIVKFYGFCSHARHSFIVYEYLEMGSL------AMILSNDAA-------AKDL 535
+ H NI+ G C H + ++ EY G+L + +L D A A L
Sbjct: 77 CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 136
Query: 536 GWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDS 595
+ ++ V + Y+ F +HR+++++N+L+ A ++DFG ++ +
Sbjct: 137 SSQQLLHFAADVARGMDYLSQKQF---IHRNLAARNILVGENYVAKIADFGLSRGQEVYV 193
Query: 596 SNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNL 654
L Y++ T DV+S+GVL E++ G P +
Sbjct: 194 KKTMGRLPVRWMAIESLNYSVYTTNS-DVWSYGVLLWEIVSLGGTP----------YCGM 242
Query: 655 EIA-LNEMLDP--RLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKV 701
A L E L RL P N D++ +M C E P RP+ ++
Sbjct: 243 TCAELYEKLPQGYRLEKPL-NCDDEVYDLMR---QCWREKPYERPSFAQI 288
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 123/292 (42%), Gaps = 52/292 (17%)
Query: 444 IGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEV---KTLTGIRHRNIVK 499
+ +GG VY+A+ + SG A+K+ L +E + + EV K L+G H NIV+
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRL---LSNEEEKNRAIIQEVCFMKKLSG--HPNIVQ 90
Query: 500 FYGFCSHA----------RHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVD 549
F CS A + F++ L G L L + L + +
Sbjct: 91 F---CSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCR 147
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLK--PDSSNWAELAG---- 603
A+ +MH PPI+HRD+ +N+LL + + DFG+A + PD S A+
Sbjct: 148 AVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEE 206
Query: 604 ------TYGYVAPE---LAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNL 654
T Y PE L + EK D+++ G + + +HP +
Sbjct: 207 EITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFE------------ 254
Query: 655 EIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
+ A +++ + P H+ Q + + A+ L +PE R +I +V L+
Sbjct: 255 DGAKLRIVNGKYSIPPHDTQYTVFHSLIRAM--LQVNPEERLSIAEVVHQLQ 304
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 121/282 (42%), Gaps = 38/282 (13%)
Query: 444 IGKGGQGSVYKAELPSGEI-------VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRN 496
+G+G G VY+ + G + VA+K + + M + EFLNE + +
Sbjct: 33 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 89
Query: 497 IVKFYGFCSHARHSFIVYEYLEMG-------SLAMILSNDAAAKDLGWTKRMNVIKGVVD 549
+V+ G S + + ++ E + G SL ++N+ +K + + + D
Sbjct: 90 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 149
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT----Y 605
++Y++ + F VHRD++++N ++ + + DFG + + +++ G
Sbjct: 150 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 204
Query: 606 GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDP 664
+++PE T DV+SFGV+ E+ + P + E L +++
Sbjct: 205 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--------YQGLSNEQVLRFVMEG 256
Query: 665 RLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
L N D L +M + C +P+ RP+ ++ +K
Sbjct: 257 GLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIK 295
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 92/199 (46%), Gaps = 9/199 (4%)
Query: 444 IGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IG+G G+V+KA+ + EIVA+K+ E L E+ L ++H+NIV+ +
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSA-LREICLLKELKHKNIVRLHD 68
Query: 503 FCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPI 562
+ +V+E+ + D+ DL + + ++ L + H+ +
Sbjct: 69 VLHSDKKLTLVFEFCDQDLKKYF---DSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NV 122
Query: 563 VHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKV-TEK 621
+HRD+ +N+L++ E ++DFG A+ ++ T Y P++ + K+ +
Sbjct: 123 LHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTS 182
Query: 622 CDVYSFGVLALEVIKGKHP 640
D++S G + E+ P
Sbjct: 183 IDMWSAGCIFAELANAARP 201
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 95/219 (43%), Gaps = 37/219 (16%)
Query: 444 IGKGGQGSVYKAEL-------PSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RH 494
+G+G G V AE P + VAVK E S + ++E++ + I +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLS--DLVSEMEMMKMIGKH 100
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILS-------------NDAAAKDLGWTKRM 541
+NI+ G C+ +++ EY G+L L N + + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 542 NVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAEL 601
+ + + Y+ + +HRD++++NVL+ N ++DFG A+ D +N
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYY 213
Query: 602 AGTYG------YVAPELAYTMKVTEKCDVYSFGVLALEV 634
T ++APE + T + DV+SFGVL E+
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 12/199 (6%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G GSV + ++ SG +AVKK P S + +++ + E++ L ++H N++
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 117
Query: 503 FCSHARHSFIVYE--YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFP 560
+ A S + YL + L+N + L +I ++ L Y+H+
Sbjct: 118 VFTPAT-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 173
Query: 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVT 619
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 174 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYN 230
Query: 620 EKCDVYSFGVLALEVIKGK 638
D++S G + E++ G+
Sbjct: 231 MTVDIWSVGCIMAELLTGR 249
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 121/282 (42%), Gaps = 38/282 (13%)
Query: 444 IGKGGQGSVYKAELPSGEI-------VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRN 496
+G+G G VY+ + G + VA+K + + M + EFLNE + +
Sbjct: 23 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 79
Query: 497 IVKFYGFCSHARHSFIVYEYLEMG-------SLAMILSNDAAAKDLGWTKRMNVIKGVVD 549
+V+ G S + + ++ E + G SL ++N+ +K + + + D
Sbjct: 80 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 139
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT----Y 605
++Y++ + F VHRD++++N ++ + + DFG + + +++ G
Sbjct: 140 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 194
Query: 606 GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDP 664
+++PE T DV+SFGV+ E+ + P + E L +++
Sbjct: 195 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--------YQGLSNEQVLRFVMEG 246
Query: 665 RLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
L N D L +M + C +P+ RP+ ++ +K
Sbjct: 247 GLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIK 285
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 117/280 (41%), Gaps = 34/280 (12%)
Query: 444 IGKGGQGSVYKAELPSGEI-------VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRN 496
+G+G G VY+ + G + VA+K + + M + EFLNE + +
Sbjct: 18 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 74
Query: 497 IVKFYGFCSHARHSFIVYEYLEMGSLAMIL-------SNDAAAKDLGWTKRMNVIKGVVD 549
+V+ G S + + ++ E + G L L N+ +K + + + D
Sbjct: 75 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 134
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG--TYGY 607
++Y++ + F VHRD++++N ++ + + DFG + + G +
Sbjct: 135 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 191
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRL 666
++PE T DV+SFGV+ E+ + P + E L +++ L
Sbjct: 192 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--------YQGLSNEQVLRFVMEGGL 243
Query: 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
N D L+ +M + C +P+ RP+ ++ +K
Sbjct: 244 LDKPDNCPDMLLELMRM---CWQYNPKMRPSFLEIISSIK 280
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 89/207 (42%), Gaps = 8/207 (3%)
Query: 436 NDFDDEHCIGKGGQGSVYKAELPSGEIV-AVKKFHSPLPSEMASQQEFLNEVKTL-TGIR 493
+DF IGKG G V A + E+ AVK + ++ ++E L ++
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 494 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSY 553
H +V + A + V +Y+ G L L + L R + + AL Y
Sbjct: 98 HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCF--LEPRARFYAAE-IASALGY 154
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELA 613
+H+ IV+RD+ +N+LLD + ++DFG K +S + GT Y+APE+
Sbjct: 155 LHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVL 211
Query: 614 YTMKVTEKCDVYSFGVLALEVIKGKHP 640
+ D + G + E++ G P
Sbjct: 212 HKQPYDRTVDWWCLGAVLYEMLYGLPP 238
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 119/282 (42%), Gaps = 38/282 (13%)
Query: 444 IGKGGQGSVYKAELPSGEI-------VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRN 496
+G+G G VY+ + G + VA+K + + M + EFLNE + +
Sbjct: 55 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 111
Query: 497 IVKFYGFCSHARHSFIVYEYLEMGSLAMIL-------SNDAAAKDLGWTKRMNVIKGVVD 549
+V+ G S + + ++ E + G L L N+ +K + + + D
Sbjct: 112 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 171
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT----Y 605
++Y++ + F VHRD++++N ++ + + DFG + + +++ G
Sbjct: 172 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 226
Query: 606 GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDP 664
+++PE T DV+SFGV+ E+ + P + E L +++
Sbjct: 227 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--------YQGLSNEQVLRFVMEG 278
Query: 665 RLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
L N D L +M + C +P+ RP+ ++ +K
Sbjct: 279 GLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIK 317
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 112/281 (39%), Gaps = 31/281 (11%)
Query: 444 IGKGGQGSVYKAE------LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHR-N 496
+G+G G V +A+ + VAVK + + + ++E+K L I H N
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLN 94
Query: 497 IVKFYGFCSHARHSF-IVYEYLEMGSLAMILSNDA------AAKDL--GWTKRMNVIKGV 547
+V G C+ ++ E+ + G+L+ L + +DL + ++I
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYS 154
Query: 548 VDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFL--KPDSSNWAELAGTY 605
M +HRD++++N+LL +N + DFG A+ + PD +
Sbjct: 155 FQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 606 GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDP 664
++APE + T + DV+SFGVL E+ G P L+ M P
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG-TRMRAP 273
Query: 665 RLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLL 705
TP + + + C P RPT ++ + L
Sbjct: 274 DYTTP---------EMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 94/234 (40%), Gaps = 44/234 (18%)
Query: 433 RVTNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTG 491
R DF + IG GG G V+KA+ G+ +++ +E A + EVK L
Sbjct: 9 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRV--KYNNEKAER-----EVKALAK 61
Query: 492 IRHRNIVKFYGFC------------------------------SHARHSFIVYEYLEMGS 521
+ H NIV + G C S + FI E+ + G+
Sbjct: 62 LDHVNIVHYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGT 120
Query: 522 LAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAH 581
L + K L + + + + + Y+H+ ++HRD+ N+ L +
Sbjct: 121 LEQWIEKRRGEK-LDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVK 176
Query: 582 VSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVI 635
+ DFG LK D GT Y++PE + ++ D+Y+ G++ E++
Sbjct: 177 IGDFGLVTSLKNDGKR-TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 95/219 (43%), Gaps = 37/219 (16%)
Query: 444 IGKGGQGSVYKAEL-------PSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RH 494
+G+G G V AE P + VAVK + S + ++E++ + I +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS--DLVSEMEMMKMIGKH 100
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILS-------------NDAAAKDLGWTKRM 541
+NI+ G C+ +++ EY G+L L N + + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLV 160
Query: 542 NVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAEL 601
+ + + Y+ + +HRD++++NVL+ N ++DFG A+ D +N
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDXX 213
Query: 602 AGTYG------YVAPELAYTMKVTEKCDVYSFGVLALEV 634
T ++APE + T + DV+SFGVL E+
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 95/219 (43%), Gaps = 37/219 (16%)
Query: 444 IGKGGQGSVYKAEL-------PSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RH 494
+G+G G V AE P + VAVK + S + ++E++ + I +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS--DLVSEMEMMKMIGKH 100
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILS-------------NDAAAKDLGWTKRM 541
+NI+ G C+ +++ EY G+L L N + + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 542 NVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAEL 601
+ + + Y+ + +HRD++++NVL+ N ++DFG A+ D +N
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDXX 213
Query: 602 AGTYG------YVAPELAYTMKVTEKCDVYSFGVLALEV 634
T ++APE + T + DV+SFGVL E+
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 70/137 (51%), Gaps = 16/137 (11%)
Query: 5 LAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALS 64
L LYL NS + +P+EI L +L L+LS N+L S+P LG+ Q+ + FDN ++
Sbjct: 249 LTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT 306
Query: 65 GAIPKEYGNLVKLTLLTLENNQLRGPIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPNL 124
+P E+GNL L L +E N L +++ L + +TG I F + N
Sbjct: 307 -TLPWEFGNLCNLQFLGVEGNPLE---------KQFLKI-LTEKSVTGLI---FYLRDNR 352
Query: 125 AFIDLSHNYFYGEISSD 141
I L H + EI++D
Sbjct: 353 PEIPLPHERRFIEINTD 369
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 245 HYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSG 304
H L+LSN Q I I + K L+ L L+ N L E +P++I N+ +L L+LSHN L+
Sbjct: 227 HALDLSNLQ-IFNISANIFKYDFLTRLYLNGNSLTE-LPAEIKNLSNLRVLDLSHNRLTS 284
Query: 305 F---IPSCFE 311
+ SCF+
Sbjct: 285 LPAELGSCFQ 294
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 119/282 (42%), Gaps = 38/282 (13%)
Query: 444 IGKGGQGSVYKAELPSGEI-------VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRN 496
+G+G G VY+ + G + VA+K + + M + EFLNE + +
Sbjct: 20 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 76
Query: 497 IVKFYGFCSHARHSFIVYEYLEMGSLAMIL-------SNDAAAKDLGWTKRMNVIKGVVD 549
+V+ G S + + ++ E + G L L N+ +K + + + D
Sbjct: 77 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 136
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT----Y 605
++Y++ + F VHRD++++N ++ + + DFG + + +++ G
Sbjct: 137 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 191
Query: 606 GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDP 664
+++PE T DV+SFGV+ E+ + P + E L +++
Sbjct: 192 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--------YQGLSNEQVLRFVMEG 243
Query: 665 RLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
L N D L +M + C +P+ RP+ ++ +K
Sbjct: 244 GLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIK 282
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 95/216 (43%), Gaps = 25/216 (11%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
NDF IG+GG G VY + +G++ A+K + LNE L+ +
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 495 RN----IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDA--AAKDLGWTKRMNVIKGVV 548
+ + Y F + + SFI+ + + G L LS + D+ + ++
Sbjct: 248 GDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRF-----YAAEII 301
Query: 549 DALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTA---KFLKPDSSNWAELAGTY 605
L +MHN +V+RD+ N+LLD +SD G A KP +S GT+
Sbjct: 302 LGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTH 353
Query: 606 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
GY+APE L + D +S G + ++++G P
Sbjct: 354 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 95/216 (43%), Gaps = 25/216 (11%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
NDF IG+GG G VY + +G++ A+K + LNE L+ +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 495 RN----IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDA--AAKDLGWTKRMNVIKGVV 548
+ + Y F + + SFI+ + + G L LS + D+ + ++
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRF-----YAAEII 302
Query: 549 DALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTA---KFLKPDSSNWAELAGTY 605
L +MHN +V+RD+ N+LLD +SD G A KP +S GT+
Sbjct: 303 LGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTH 354
Query: 606 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
GY+APE L + D +S G + ++++G P
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 86/200 (43%), Gaps = 13/200 (6%)
Query: 448 GQGSVYKAELPS----GEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
G+GS K +L + + VA+K L + E+ L +RH +I+K Y
Sbjct: 18 GEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDV 77
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+ +V EY I+ +D G + ++ A+ Y H IV
Sbjct: 78 ITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEG----RRFFQQIICAIEYCHRH---KIV 130
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY-TMKVTEKC 622
HRD+ +N+LLD ++DFG + + D + G+ Y APE+ + +
Sbjct: 131 HRDLKPENLLLDDNLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVINGKLYAGPEV 189
Query: 623 DVYSFGVLALEVIKGKHPRD 642
DV+S G++ ++ G+ P D
Sbjct: 190 DVWSCGIVLYVMLVGRLPFD 209
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 119/282 (42%), Gaps = 38/282 (13%)
Query: 444 IGKGGQGSVYKAELPSGEI-------VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRN 496
+G+G G VY+ + G + VA+K + + M + EFLNE + +
Sbjct: 26 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 82
Query: 497 IVKFYGFCSHARHSFIVYEYLEMGSLAMIL-------SNDAAAKDLGWTKRMNVIKGVVD 549
+V+ G S + + ++ E + G L L N+ +K + + + D
Sbjct: 83 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 142
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT----Y 605
++Y++ + F VHRD++++N ++ + + DFG + + +++ G
Sbjct: 143 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 197
Query: 606 GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDP 664
+++PE T DV+SFGV+ E+ + P + E L +++
Sbjct: 198 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--------YQGLSNEQVLRFVMEG 249
Query: 665 RLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
L N D L +M + C +P+ RP+ ++ +K
Sbjct: 250 GLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIK 288
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 116/280 (41%), Gaps = 34/280 (12%)
Query: 444 IGKGGQGSVYKAELPSGEI-------VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRN 496
+G+G G VY+ + G + VA+K + + M + EFLNE + +
Sbjct: 27 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 83
Query: 497 IVKFYGFCSHARHSFIVYEYLEMGSLAMIL-------SNDAAAKDLGWTKRMNVIKGVVD 549
+V+ G S + + ++ E + G L L N+ +K + + + D
Sbjct: 84 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 143
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG--TYGY 607
++Y++ + F VHRD++++N ++ + + DFG + + G +
Sbjct: 144 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 200
Query: 608 VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRL 666
++PE T DV+SFGV+ E+ + P + E L +++ L
Sbjct: 201 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--------YQGLSNEQVLRFVMEGGL 252
Query: 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
N D L +M + C +P+ RP+ ++ +K
Sbjct: 253 LDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIK 289
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 119/282 (42%), Gaps = 38/282 (13%)
Query: 444 IGKGGQGSVYKAELPSGEI-------VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRN 496
+G+G G VY+ + G + VA+K + + M + EFLNE + +
Sbjct: 24 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 80
Query: 497 IVKFYGFCSHARHSFIVYEYLEMGSLAMIL-------SNDAAAKDLGWTKRMNVIKGVVD 549
+V+ G S + + ++ E + G L L N+ +K + + + D
Sbjct: 81 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 140
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT----Y 605
++Y++ + F VHRD++++N ++ + + DFG + + +++ G
Sbjct: 141 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 195
Query: 606 GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDP 664
+++PE T DV+SFGV+ E+ + P + E L +++
Sbjct: 196 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--------YQGLSNEQVLRFVMEG 247
Query: 665 RLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
L N D L +M + C +P+ RP+ ++ +K
Sbjct: 248 GLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIK 286
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 119/282 (42%), Gaps = 38/282 (13%)
Query: 444 IGKGGQGSVYKAELPSGEI-------VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRN 496
+G+G G VY+ + G + VA+K + + M + EFLNE + +
Sbjct: 33 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 89
Query: 497 IVKFYGFCSHARHSFIVYEYLEMGSLAMIL-------SNDAAAKDLGWTKRMNVIKGVVD 549
+V+ G S + + ++ E + G L L N+ +K + + + D
Sbjct: 90 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 149
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT----Y 605
++Y++ + F VHRD++++N ++ + + DFG + + +++ G
Sbjct: 150 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 204
Query: 606 GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDP 664
+++PE T DV+SFGV+ E+ + P + E L +++
Sbjct: 205 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--------YQGLSNEQVLRFVMEG 256
Query: 665 RLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
L N D L +M + C +P+ RP+ ++ +K
Sbjct: 257 GLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIK 295
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 32/217 (14%)
Query: 441 EHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
+ IGKG G V++ + GE VAVK F S + E V +RH NI+ F
Sbjct: 47 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVM----LRHENILGF 101
Query: 501 YGFCSHARHSF----IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHN 556
+ ++ +V +Y E GSL L+ + + + L+++H
Sbjct: 102 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLHM 157
Query: 557 DCF-----PPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDS-SNWAELA-----GTY 605
+ P I HRD+ SKN+L+ ++D G A ++ DS ++ ++A GT
Sbjct: 158 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTK 215
Query: 606 GYVAPEL---AYTMKVTE---KCDVYSFGVLALEVIK 636
Y+APE+ + MK E + D+Y+ G++ E+ +
Sbjct: 216 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 252
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 95/216 (43%), Gaps = 25/216 (11%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
NDF IG+GG G VY + +G++ A+K + LNE L+ +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 495 RN----IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDA--AAKDLGWTKRMNVIKGVV 548
+ + Y F + + SFI+ + + G L LS + D+ + ++
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRF-----YAAEII 302
Query: 549 DALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFL---KPDSSNWAELAGTY 605
L +MHN +V+RD+ N+LLD +SD G A KP +S GT+
Sbjct: 303 LGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTH 354
Query: 606 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
GY+APE L + D +S G + ++++G P
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 95/216 (43%), Gaps = 25/216 (11%)
Query: 436 NDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
NDF IG+GG G VY + +G++ A+K + LNE L+ +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 495 RN----IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDA--AAKDLGWTKRMNVIKGVV 548
+ + Y F + + SFI+ + + G L LS + D+ + ++
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRF-----YAAEII 302
Query: 549 DALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFL---KPDSSNWAELAGTY 605
L +MHN +V+RD+ N+LLD +SD G A KP +S GT+
Sbjct: 303 LGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTH 354
Query: 606 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
GY+APE L + D +S G + ++++G P
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 119/282 (42%), Gaps = 38/282 (13%)
Query: 444 IGKGGQGSVYKAELPSGEI-------VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRN 496
+G+G G VY+ + G + VA+K + + M + EFLNE + +
Sbjct: 27 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 83
Query: 497 IVKFYGFCSHARHSFIVYEYLEMGSLAMIL-------SNDAAAKDLGWTKRMNVIKGVVD 549
+V+ G S + + ++ E + G L L N+ +K + + + D
Sbjct: 84 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 143
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT----Y 605
++Y++ + F VHRD++++N ++ + + DFG + + +++ G
Sbjct: 144 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 198
Query: 606 GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDP 664
+++PE T DV+SFGV+ E+ + P + E L +++
Sbjct: 199 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--------YQGLSNEQVLRFVMEG 250
Query: 665 RLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
L N D L +M + C +P+ RP+ ++ +K
Sbjct: 251 GLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIK 289
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 97/216 (44%), Gaps = 37/216 (17%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G G +G++ + VAVK+ S + + L E H N++++ F
Sbjct: 32 LGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESD-----EHPNVIRY--F 84
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWT--KRMNVIKGVVDALSYMHNDCFPP 561
C+ F +Y+ + A L KD + + +++ L+++H+
Sbjct: 85 CTEKDRQF---QYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHS---LN 138
Query: 562 IVHRDISSKNVLLDLEN-----EAHVSDFGTAKFL---KPDSSNWAELAGTYGYVAPELA 613
IVHRD+ N+L+ + N +A +SDFG K L + S + + GT G++APE+
Sbjct: 139 IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEM- 197
Query: 614 YTMKVTEKC--------DVYSFGVLALEVI-KGKHP 640
++E C D++S G + VI +G HP
Sbjct: 198 ----LSEDCKENPTYTVDIFSAGCVFYYVISEGSHP 229
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 11/180 (6%)
Query: 465 VKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAM 524
+KK S S++E EV L + H N++ + + ++ E + G L
Sbjct: 45 IKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFD 104
Query: 525 ILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLEN----EA 580
L A + L + + IK ++D ++Y+H I H D+ +N++L +N
Sbjct: 105 FL---AQKESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 581 HVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
+ DFG A ++ D + + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 159 KLIDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 11/180 (6%)
Query: 465 VKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAM 524
+KK S S++E EV L + H N++ + + ++ E + G L
Sbjct: 45 IKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFD 104
Query: 525 ILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLEN----EA 580
L A + L + + IK ++D ++Y+H I H D+ +N++L +N
Sbjct: 105 FL---AQKESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 581 HVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
+ DFG A ++ D + + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 159 KLIDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 32/217 (14%)
Query: 441 EHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
+ IGKG G V++ + GE VAVK F S + E V +RH NI+ F
Sbjct: 34 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVM----LRHENILGF 88
Query: 501 YGFCSHARHSF----IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHN 556
+ ++ +V +Y E GSL L+ + + + L+++H
Sbjct: 89 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLHM 144
Query: 557 DCF-----PPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDS-SNWAELA-----GTY 605
+ P I HRD+ SKN+L+ ++D G A ++ DS ++ ++A GT
Sbjct: 145 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTK 202
Query: 606 GYVAPEL---AYTMKVTE---KCDVYSFGVLALEVIK 636
Y+APE+ + MK E + D+Y+ G++ E+ +
Sbjct: 203 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 239
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 80/160 (50%), Gaps = 26/160 (16%)
Query: 444 IGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQE-----FLNEVKTLTGIRHRNI 497
IG+G G V+KA +G+ VA+KK M +++E L E+K L ++H N+
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVL------MENEKEGFPITALREIKILQLLKHENV 78
Query: 498 VKFYGFCSHARHSF--------IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVD 549
V C + +V+++ E LA +LSN L KR V++ +++
Sbjct: 79 VNLIEICRTKASPYNRCKGSIYLVFDFCE-HDLAGLLSNVLVKFTLSEIKR--VMQMLLN 135
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAK 589
L Y+H + I+HRD+ + NVL+ + ++DFG A+
Sbjct: 136 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 119/282 (42%), Gaps = 38/282 (13%)
Query: 444 IGKGGQGSVYKAELPSGEI-------VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRN 496
+G+G G VY+ + G + VA+K + + M + EFLNE + +
Sbjct: 26 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 82
Query: 497 IVKFYGFCSHARHSFIVYEYLEMGSLAMIL-------SNDAAAKDLGWTKRMNVIKGVVD 549
+V+ G S + + ++ E + G L L N+ +K + + + D
Sbjct: 83 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 142
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT----Y 605
++Y++ + F VHRD++++N ++ + + DFG + + +++ G
Sbjct: 143 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 197
Query: 606 GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDP 664
+++PE T DV+SFGV+ E+ + P + E L +++
Sbjct: 198 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--------YQGLSNEQVLRFVMEG 249
Query: 665 RLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
L N D L +M + C +P+ RP+ ++ +K
Sbjct: 250 GLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIK 288
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 83/160 (51%), Gaps = 26/160 (16%)
Query: 444 IGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQE-----FLNEVKTLTGIRHRNI 497
IG+G G V+KA +G+ VA+KK M +++E L E+K L ++H N+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVL------MENEKEGFPITALREIKILQLLKHENV 79
Query: 498 VKFYGFC-------SHARHS-FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVD 549
V C + + S ++V+++ E LA +LSN L KR V++ +++
Sbjct: 80 VNLIEICRTKASPYNRCKASIYLVFDFCE-HDLAGLLSNVLVKFTLSEIKR--VMQMLLN 136
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAK 589
L Y+H + I+HRD+ + NVL+ + ++DFG A+
Sbjct: 137 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+GKG V + ++ +G+ A K ++ S Q+ E + ++H NIV+ +
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLS-ARDHQKLEREARICRLLKHPNIVRLHD 88
Query: 503 FCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPI 562
S H +++++ + G L + A + + I+ +++A+ + H +
Sbjct: 89 SISEEGHHYLIFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEAVLHCHQ---MGV 142
Query: 563 VHRDISSKNVLL--DLENEA-HVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVT 619
VHRD+ +N+LL L+ A ++DFG A ++ + W AGT GY++PE+
Sbjct: 143 VHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYG 202
Query: 620 EKCDVYSFGVLALEVIKGKHP 640
+ D+++ GV+ ++ G P
Sbjct: 203 KPVDLWACGVILYILLVGYPP 223
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 11/180 (6%)
Query: 465 VKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAM 524
+KK S S++E EV L + H N++ + + ++ E + G L
Sbjct: 45 IKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFD 104
Query: 525 ILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLEN----EA 580
L A + L + + IK ++D ++Y+H I H D+ +N++L +N
Sbjct: 105 FL---AQKESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 581 HVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
+ DFG A ++ D + + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 159 KLIDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 95/219 (43%), Gaps = 37/219 (16%)
Query: 444 IGKGGQGSVYKAEL-------PSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RH 494
+G+G G V AE P + VAVK + S + ++E++ + I +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS--DLVSEMEMMKMIGKH 100
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILS-------------NDAAAKDLGWTKRM 541
+NI+ G C+ +++ EY G+L L N + + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 542 NVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAEL 601
+ + + Y+ + +HRD++++NVL+ N ++DFG A+ D +N
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYY 213
Query: 602 AGTYG------YVAPELAYTMKVTEKCDVYSFGVLALEV 634
T ++APE + T + DV+SFGVL E+
Sbjct: 214 KNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 11/180 (6%)
Query: 465 VKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAM 524
+KK S S++E EV L + H N++ + + ++ E + G L
Sbjct: 45 IKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFD 104
Query: 525 ILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLEN----EA 580
L A + L + + IK ++D ++Y+H I H D+ +N++L +N
Sbjct: 105 FL---AQKESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 581 HVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
+ DFG A ++ D + + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 159 KLIDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 80/160 (50%), Gaps = 26/160 (16%)
Query: 444 IGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQE-----FLNEVKTLTGIRHRNI 497
IG+G G V+KA +G+ VA+KK M +++E L E+K L ++H N+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVL------MENEKEGFPITALREIKILQLLKHENV 79
Query: 498 VKFYGFCSHARHSF--------IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVD 549
V C + +V+++ E LA +LSN L KR V++ +++
Sbjct: 80 VNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--VMQMLLN 136
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAK 589
L Y+H + I+HRD+ + NVL+ + ++DFG A+
Sbjct: 137 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 80/160 (50%), Gaps = 26/160 (16%)
Query: 444 IGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQE-----FLNEVKTLTGIRHRNI 497
IG+G G V+KA +G+ VA+KK M +++E L E+K L ++H N+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVL------MENEKEGFPITALREIKILQLLKHENV 79
Query: 498 VKFYGFCSHARHSF--------IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVD 549
V C + +V+++ E LA +LSN L KR V++ +++
Sbjct: 80 VNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--VMQMLLN 136
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAK 589
L Y+H + I+HRD+ + NVL+ + ++DFG A+
Sbjct: 137 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 95/219 (43%), Gaps = 37/219 (16%)
Query: 444 IGKGGQGSVYKAEL-------PSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RH 494
+G+G G V AE P + VAVK + S + ++E++ + I +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS--DLVSEMEMMKMIGKH 100
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILS-------------NDAAAKDLGWTKRM 541
+NI+ G C+ +++ EY G+L L N + + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 542 NVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAEL 601
+ + + Y+ + +HRD++++NVL+ N ++DFG A+ D +N
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLAR----DINNIDYY 213
Query: 602 AGTYG------YVAPELAYTMKVTEKCDVYSFGVLALEV 634
T ++APE + T + DV+SFGVL E+
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 11/180 (6%)
Query: 465 VKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAM 524
+KK S S++E EV L + H N++ + + ++ E + G L
Sbjct: 45 IKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFD 104
Query: 525 ILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLEN----EA 580
L A + L + + IK ++D ++Y+H I H D+ +N++L +N
Sbjct: 105 FL---AQKESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 581 HVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
+ DFG A ++ D + + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 159 KLIDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 14/221 (6%)
Query: 429 EEIIRVTNDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVK 487
+E+ +DF+ IG+G V ++ +G++ A+K + + F E
Sbjct: 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERD 113
Query: 488 TLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGV 547
L R I + + + ++V EY G L +LS + + + +
Sbjct: 114 VLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSK--FGERIPAEMARFYLAEI 171
Query: 548 VDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELA-GTYG 606
V A+ +H + VHRDI N+LLD ++DFG+ L+ D + + +A GT
Sbjct: 172 VMAIDSVHRLGY---VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPD 228
Query: 607 YVAPELAYTMKVTE-------KCDVYSFGVLALEVIKGKHP 640
Y++PE+ + +CD ++ GV A E+ G+ P
Sbjct: 229 YLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP 269
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 119/282 (42%), Gaps = 38/282 (13%)
Query: 444 IGKGGQGSVYKAELPSGEI-------VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRN 496
+G+G G VY+ + G + VA+K + + M + EFLNE + +
Sbjct: 20 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 76
Query: 497 IVKFYGFCSHARHSFIVYEYLEMGSLAMIL-------SNDAAAKDLGWTKRMNVIKGVVD 549
+V+ G S + + ++ E + G L L N+ +K + + + D
Sbjct: 77 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 136
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT----Y 605
++Y++ + F VHRD++++N + + + DFG + + +++ G
Sbjct: 137 GMAYLNANKF---VHRDLAARNCXVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 191
Query: 606 GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDP 664
+++PE T DV+SFGV+ E+ + P + E L +++
Sbjct: 192 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--------YQGLSNEQVLRFVMEG 243
Query: 665 RLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
L N D L+ +M + C +P+ RP+ ++ +K
Sbjct: 244 GLLDKPDNCPDMLLELMRM---CWQYNPKMRPSFLEIISSIK 282
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 86/193 (44%), Gaps = 31/193 (16%)
Query: 463 VAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGFCSHARHSFIVYEYLEMGS 521
VAVK S + S + ++E++ + I +H+NI+ G C+ +++ EY G+
Sbjct: 63 VAVKMLKSDATEKDLS--DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 120
Query: 522 LAMILS------------------NDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
L L ++KDL ++ V + Y+ + +
Sbjct: 121 LREYLQARRPPGLEFSFNPSHNPEEQLSSKDL-----VSCAYQVARGMEYLASK---KCI 172
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT--YGYVAPELAYTMKVTEK 621
HRD++++NVL+ +N ++DFG A+ + G ++APE + T +
Sbjct: 173 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQ 232
Query: 622 CDVYSFGVLALEV 634
DV+SFGVL E+
Sbjct: 233 SDVWSFGVLLWEI 245
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 32/217 (14%)
Query: 441 EHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
+ IGKG G V++ + GE VAVK F S + E V +RH NI+ F
Sbjct: 11 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVM----LRHENILGF 65
Query: 501 YGFCSHARHSF----IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHN 556
+ ++ +V +Y E GSL L+ + + + L+++H
Sbjct: 66 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLHM 121
Query: 557 DCF-----PPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDS-SNWAELA-----GTY 605
+ P I HRD+ SKN+L+ ++D G A ++ DS ++ ++A GT
Sbjct: 122 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTK 179
Query: 606 GYVAPEL---AYTMKVTE---KCDVYSFGVLALEVIK 636
Y+APE+ + MK E + D+Y+ G++ E+ +
Sbjct: 180 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 216
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 474 SEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILS------ 527
S++ S+ E + + +H+NI+ G C+ +++ EY G+L L
Sbjct: 131 SDLVSEMEMMKMIG-----KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPG 185
Query: 528 -------NDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEA 580
N + + + ++ + + Y+ + +HRD++++NVL+ N
Sbjct: 186 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVM 242
Query: 581 HVSDFGTAKFLKPDSSNWAELAGTYG------YVAPELAYTMKVTEKCDVYSFGVLALEV 634
++DFG A+ D +N T ++APE + T + DV+SFGVL E+
Sbjct: 243 KIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 298
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 32/217 (14%)
Query: 441 EHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
+ IGKG G V++ + GE VAVK F S + E V +RH NI+ F
Sbjct: 9 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVM----LRHENILGF 63
Query: 501 YGFCSHARHSF----IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHN 556
+ ++ +V +Y E GSL L+ + + + L+++H
Sbjct: 64 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLHM 119
Query: 557 DCF-----PPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDS-SNWAELA-----GTY 605
+ P I HRD+ SKN+L+ ++D G A ++ DS ++ ++A GT
Sbjct: 120 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTK 177
Query: 606 GYVAPEL---AYTMKVTE---KCDVYSFGVLALEVIK 636
Y+APE+ + MK E + D+Y+ G++ E+ +
Sbjct: 178 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 214
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 100/212 (47%), Gaps = 12/212 (5%)
Query: 433 RVTNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI 492
+ ++++D + +GKG V + + + K + Q+ E + +
Sbjct: 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 85
Query: 493 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDL-GWTKRMNVIKGVVDAL 551
+H NIV+ + ++V++ + G L D A++ + I+ +++++
Sbjct: 86 QHPNIVRLHDSIQEESFHYLVFDLVTGGELF----EDIVAREFYSEADASHCIQQILESI 141
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENEA---HVSDFGTAKFLKPDSSNWAELAGTYGYV 608
+Y H++ IVHR++ +N+LL + + ++DFG A + DS W AGT GY+
Sbjct: 142 AYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYL 197
Query: 609 APELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
+PE+ ++ D+++ GV+ ++ G P
Sbjct: 198 SPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 474 SEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILS------ 527
S++ S+ E + + +H+NI+ G C+ +++ EY G+L L
Sbjct: 72 SDLVSEMEMMKMIG-----KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPG 126
Query: 528 -------NDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEA 580
N + + + ++ + + Y+ + +HRD++++NVL+ N
Sbjct: 127 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVM 183
Query: 581 HVSDFGTAKFLKPDSSNWAELAGTYG------YVAPELAYTMKVTEKCDVYSFGVLALEV 634
++DFG A+ D +N T ++APE + T + DV+SFGVL E+
Sbjct: 184 KIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 239
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 32/217 (14%)
Query: 441 EHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
+ IGKG G V++ + GE VAVK F S + E V +RH NI+ F
Sbjct: 8 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVM----LRHENILGF 62
Query: 501 YGFCSHARHSF----IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHN 556
+ ++ +V +Y E GSL L+ + + + L+++H
Sbjct: 63 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLHM 118
Query: 557 DCF-----PPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDS-SNWAELA-----GTY 605
+ P I HRD+ SKN+L+ ++D G A ++ DS ++ ++A GT
Sbjct: 119 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTK 176
Query: 606 GYVAPEL---AYTMKVTE---KCDVYSFGVLALEVIK 636
Y+APE+ + MK E + D+Y+ G++ E+ +
Sbjct: 177 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 213
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 95/219 (43%), Gaps = 37/219 (16%)
Query: 444 IGKGGQGSVYKAEL-------PSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RH 494
+G+G G V AE P + VAVK + S + ++E++ + I +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS--DLVSEMEMMKMIGKH 100
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILS-------------NDAAAKDLGWTKRM 541
+NI+ G C+ +++ EY G+L L N + + + +
Sbjct: 101 KNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 542 NVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAEL 601
+ + + Y+ + +HRD++++NVL+ N ++DFG A+ D +N
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYY 213
Query: 602 AGTYG------YVAPELAYTMKVTEKCDVYSFGVLALEV 634
T ++APE + T + DV+SFGVL E+
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 32/217 (14%)
Query: 441 EHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
+ IGKG G V++ + GE VAVK F S + E V +RH NI+ F
Sbjct: 14 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVM----LRHENILGF 68
Query: 501 YGFCSHARHSF----IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHN 556
+ ++ +V +Y E GSL L+ + + + L+++H
Sbjct: 69 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLHM 124
Query: 557 DCF-----PPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDS-SNWAELA-----GTY 605
+ P I HRD+ SKN+L+ ++D G A ++ DS ++ ++A GT
Sbjct: 125 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTK 182
Query: 606 GYVAPEL---AYTMKVTE---KCDVYSFGVLALEVIK 636
Y+APE+ + MK E + D+Y+ G++ E+ +
Sbjct: 183 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 219
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 95/219 (43%), Gaps = 37/219 (16%)
Query: 444 IGKGGQGSVYKAEL-------PSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RH 494
+G+G G V AE P + VAVK + S + ++E++ + I +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS--DLVSEMEMMKMIGKH 100
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILS-------------NDAAAKDLGWTKRM 541
+NI+ G C+ +++ EY G+L L N + + + +
Sbjct: 101 KNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 542 NVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAEL 601
+ + + Y+ + +HRD++++NVL+ N ++DFG A+ D +N
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYY 213
Query: 602 AGTYG------YVAPELAYTMKVTEKCDVYSFGVLALEV 634
T ++APE + T + DV+SFGVL E+
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 474 SEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILS------ 527
S++ S+ E + + +H+NI+ G C+ +++ EY G+L L
Sbjct: 74 SDLVSEMEMMKMIG-----KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPG 128
Query: 528 -------NDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEA 580
N + + + ++ + + Y+ + +HRD++++NVL+ N
Sbjct: 129 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVM 185
Query: 581 HVSDFGTAKFLKPDSSNWAELAGTYG------YVAPELAYTMKVTEKCDVYSFGVLALEV 634
++DFG A+ D +N T ++APE + T + DV+SFGVL E+
Sbjct: 186 KIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 241
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 474 SEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILS------ 527
S++ S+ E + + +H+NI+ G C+ +++ EY G+L L
Sbjct: 77 SDLVSEMEMMKMIG-----KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPG 131
Query: 528 -------NDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEA 580
N + + + ++ + + Y+ + +HRD++++NVL+ N
Sbjct: 132 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVM 188
Query: 581 HVSDFGTAKFLKPDSSNWAELAGTYG------YVAPELAYTMKVTEKCDVYSFGVLALEV 634
++DFG A+ D +N T ++APE + T + DV+SFGVL E+
Sbjct: 189 KIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 244
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 90/202 (44%), Gaps = 16/202 (7%)
Query: 444 IGKGGQGSVYK-AELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G G V++ E +G + K ++P P + + + NE+ + + H ++ +
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVK---NEISIMNQLHHPKLINLHD 115
Query: 503 FCSHARHSFIVYEYLEMGSLAMILSNDAAAKD--LGWTKRMNVIKGVVDALSYMHNDCFP 560
++ E+L G L + AA+D + + +N ++ + L +MH
Sbjct: 116 AFEDKYEMVLILEFLSGGELF----DRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS-- 169
Query: 561 PIVHRDISSKNVLLDLENEAHVS--DFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKV 618
IVH DI +N++ + + + V DFG A L PD A T + APE+ V
Sbjct: 170 -IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTA-TAEFAAPEIVDREPV 227
Query: 619 TEKCDVYSFGVLALEVIKGKHP 640
D+++ GVL ++ G P
Sbjct: 228 GFYTDMWAIGVLGYVLLSGLSP 249
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 99/211 (46%), Gaps = 10/211 (4%)
Query: 433 RVTNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI 492
+ ++++D + +GKG V + + + K + Q+ E + +
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 493 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALS 552
+H NIV+ + ++V++ + G L + A + + I+ ++++++
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESIA 119
Query: 553 YMHNDCFPPIVHRDISSKNVLLDLENEA---HVSDFGTAKFLKPDSSNWAELAGTYGYVA 609
Y H++ IVHR++ +N+LL + + ++DFG A + DS W AGT GY++
Sbjct: 120 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLS 175
Query: 610 PELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
PE+ ++ D+++ GV+ ++ G P
Sbjct: 176 PEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%)
Query: 562 IVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEK 621
I++RD+ NV+LD E ++DFG K D GT Y+APE+ +
Sbjct: 142 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKS 201
Query: 622 CDVYSFGVLALEVIKGKHP 640
D ++FGVL E++ G+ P
Sbjct: 202 VDWWAFGVLLYEMLAGQAP 220
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 31/215 (14%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFY- 501
+G GG G V+ A + + VA+KK + ++ S + L E+K + + H NIVK +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKI---VLTDPQSVKHALREIKIIRRLDHDNIVKVFE 75
Query: 502 -------------GFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVV 548
G + +IV EY+E LA +L ++ +++G
Sbjct: 76 ILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQGPLLEEHARLFMYQLLRG-- 132
Query: 549 DALSYMHNDCFPPIVHRDISSKNVLLDLENEA-HVSDFGTAKFLKPDSSNWAELAG---T 604
L Y+H+ ++HRD+ N+ ++ E+ + DFG A+ + P S+ L+ T
Sbjct: 133 --LKYIHS---ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVT 187
Query: 605 YGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGK 638
Y +P L + T+ D+++ G + E++ GK
Sbjct: 188 KWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 92/199 (46%), Gaps = 9/199 (4%)
Query: 444 IGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IG+G G+V+KA+ + EIVA+K+ E L E+ L ++H+NIV+ +
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSA-LREICLLKELKHKNIVRLHD 68
Query: 503 FCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPI 562
+ +V+E+ + D+ DL + + ++ L + H+ +
Sbjct: 69 VLHSDKKLTLVFEFCDQDLKKYF---DSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NV 122
Query: 563 VHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKV-TEK 621
+HRD+ +N+L++ E +++FG A+ ++ T Y P++ + K+ +
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTS 182
Query: 622 CDVYSFGVLALEVIKGKHP 640
D++S G + E+ P
Sbjct: 183 IDMWSAGCIFAELANAGRP 201
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 89/197 (45%), Gaps = 39/197 (19%)
Query: 463 VAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGFCSHARHSFIVYEYLEMGS 521
VAVK S + S + ++E++ + I +H+NI+ G C+ +++ EY G+
Sbjct: 104 VAVKMLKSDATEKDLS--DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 161
Query: 522 LAMILS------------------NDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
L L ++KDL ++ V + Y+ + +
Sbjct: 162 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDL-----VSCAYQVARGMEYLASK---KCI 213
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAK------FLKPDSSNWAELAGTYGYVAPELAYTMK 617
HRD++++NVL+ +N ++DFG A+ + K ++ + ++APE +
Sbjct: 214 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK----WMAPEALFDRI 269
Query: 618 VTEKCDVYSFGVLALEV 634
T + DV+SFGVL E+
Sbjct: 270 YTHQSDVWSFGVLLWEI 286
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 18/199 (9%)
Query: 446 KGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCS 505
+ G G Y A+ +KK S++E EV L IRH NI+ +
Sbjct: 33 QKGTGKEYAAKF-------IKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFE 85
Query: 506 HARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHR 565
+ ++ E + G L L A + L + +K ++D + Y+H+ I H
Sbjct: 86 NKTDVVLILELVSGGELFDFL---AEKESLTEDEATQFLKQILDGVHYLHS---KRIAHF 139
Query: 566 DISSKNVLLDLEN----EAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEK 621
D+ +N++L +N + DFG A ++ + + + GT +VAPE+ + +
Sbjct: 140 DLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA-GNEFKNIFGTPEFVAPEIVNYEPLGLE 198
Query: 622 CDVYSFGVLALEVIKGKHP 640
D++S GV+ ++ G P
Sbjct: 199 ADMWSIGVITYILLSGASP 217
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 18/199 (9%)
Query: 446 KGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCS 505
+ G G Y A+ +KK S++E EV L IRH NI+ +
Sbjct: 26 QKGTGKEYAAKF-------IKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFE 78
Query: 506 HARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHR 565
+ ++ E + G L L A + L + +K ++D + Y+H+ I H
Sbjct: 79 NKTDVVLILELVSGGELFDFL---AEKESLTEDEATQFLKQILDGVHYLHS---KRIAHF 132
Query: 566 DISSKNVLLDLEN----EAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEK 621
D+ +N++L +N + DFG A ++ + + + GT +VAPE+ + +
Sbjct: 133 DLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA-GNEFKNIFGTPEFVAPEIVNYEPLGLE 191
Query: 622 CDVYSFGVLALEVIKGKHP 640
D++S GV+ ++ G P
Sbjct: 192 ADMWSIGVITYILLSGASP 210
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 18/197 (9%)
Query: 448 GQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHA 507
G G Y A+ +KK S++E EV L IRH NI+ + +
Sbjct: 49 GTGKEYAAKF-------IKKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENK 101
Query: 508 RHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDI 567
++ E + G L L A + L + +K ++D + Y+H+ I H D+
Sbjct: 102 TDVVLILELVSGGELFDFL---AEKESLTEDEATQFLKQILDGVHYLHS---KRIAHFDL 155
Query: 568 SSKNVLLDLEN----EAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCD 623
+N++L +N + DFG A ++ + + + GT +VAPE+ + + D
Sbjct: 156 KPENIMLLDKNVPNPRIKLIDFGIAHKIEA-GNEFKNIFGTPEFVAPEIVNYEPLGLEAD 214
Query: 624 VYSFGVLALEVIKGKHP 640
++S GV+ ++ G P
Sbjct: 215 MWSIGVITYILLSGASP 231
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%)
Query: 562 IVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEK 621
I++RD+ NV+LD E ++DFG K D GT Y+APE+ +
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKS 522
Query: 622 CDVYSFGVLALEVIKGKHP 640
D ++FGVL E++ G+ P
Sbjct: 523 VDWWAFGVLLYEMLAGQAP 541
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 10/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+ FD +G G G V + SG A+K ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+VK + ++V EY+ G + L + R + +V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQ-IVLTFEYL 157
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ +++RD+ +N+L+D + V+DFG AK +K W LAGT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LAGTPEYLAPEIIL 211
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 17/205 (8%)
Query: 443 CIGKGGQGSVY---KAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIV 498
+G+G G V+ K P SG + A+K ++ + E L + H +V
Sbjct: 35 VLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKA-TLKVRDRVRTKMERDILADVNHPFVV 93
Query: 499 KF-YGFCSHARHSFIVYEYLEMGSLAMILSNDA--AAKDLGWTKRMNVIKGVVDALSYMH 555
K Y F + + +++ ++L G L LS + +D+ + + + L ++H
Sbjct: 94 KLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTEEDVKF-----YLAELALGLDHLH 147
Query: 556 NDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT 615
+ I++RD+ +N+LLD E ++DFG +K GT Y+APE+
Sbjct: 148 SLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNR 204
Query: 616 MKVTEKCDVYSFGVLALEVIKGKHP 640
+ D +S+GVL E++ G P
Sbjct: 205 QGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 100/212 (47%), Gaps = 12/212 (5%)
Query: 433 RVTNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI 492
+ ++++D + +GKG V + + + K + Q+ E + +
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 493 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDL-GWTKRMNVIKGVVDAL 551
+H NIV+ + ++V++ + G L D A++ + I+ +++++
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELF----EDIVAREFYSEADASHCIQQILESI 118
Query: 552 SYMHNDCFPPIVHRDISSKNVLLDLENEA---HVSDFGTAKFLKPDSSNWAELAGTYGYV 608
+Y H++ IVHR++ +N+LL + + ++DFG A + DS W AGT GY+
Sbjct: 119 AYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYL 174
Query: 609 APELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
+PE+ ++ D+++ GV+ ++ G P
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 87/195 (44%), Gaps = 26/195 (13%)
Query: 463 VAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGFCSHARHSFIVYEYLEMGS 521
VAVK S + ++ ++E+K +T + H NIV G C+ + ++++EY G
Sbjct: 78 VAVKMLKEKADS--SEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGD 135
Query: 522 LAMILSNDAAA-----------KDLGWTKRMNVIKGVVDALSYMHNDC-------FPPIV 563
L L + K L + +NV+ D L + + F V
Sbjct: 136 LLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT-FEDLLCFAYQVAKGMEFLEFKSCV 194
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT---YGYVAPELAYTMKVTE 620
HRD++++NVL+ + DFG A+ + D SN+ ++APE + T
Sbjct: 195 HRDLAARNVLVTHGKVVKICDFGLARDIMSD-SNYVVRGNARLPVKWMAPESLFEGIYTI 253
Query: 621 KCDVYSFGVLALEVI 635
K DV+S+G+L E+
Sbjct: 254 KSDVWSYGILLWEIF 268
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 86/193 (44%), Gaps = 31/193 (16%)
Query: 463 VAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGFCSHARHSFIVYEYLEMGS 521
VAVK S + S + ++E++ + I +H+NI+ G C+ +++ EY G+
Sbjct: 48 VAVKMLKSDATEKDLS--DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 105
Query: 522 LAMILS------------------NDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
L L ++KDL ++ V + Y+ + +
Sbjct: 106 LREYLQARRPPGLEYCYNPSHNPEEQLSSKDL-----VSCAYQVARGMEYLASK---KCI 157
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT--YGYVAPELAYTMKVTEK 621
HRD++++NVL+ +N ++DFG A+ + G ++APE + T +
Sbjct: 158 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQ 217
Query: 622 CDVYSFGVLALEV 634
DV+SFGVL E+
Sbjct: 218 SDVWSFGVLLWEI 230
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 99/211 (46%), Gaps = 10/211 (4%)
Query: 433 RVTNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI 492
+ ++++D + +GKG V + + + K + Q+ E + +
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 61
Query: 493 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALS 552
+H NIV+ + ++V++ + G L + A + + I+ ++++++
Sbjct: 62 QHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESIA 118
Query: 553 YMHNDCFPPIVHRDISSKNVLLDLENEA---HVSDFGTAKFLKPDSSNWAELAGTYGYVA 609
Y H++ IVHR++ +N+LL + + ++DFG A + DS W AGT GY++
Sbjct: 119 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLS 174
Query: 610 PELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
PE+ ++ D+++ GV+ ++ G P
Sbjct: 175 PEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 126/341 (36%), Gaps = 94/341 (27%)
Query: 444 IGKGGQGSVYKAEL------PSGEIVAVKKFHSPLPSEMASQQEF---LNEVKTLTGIRH 494
+G+G G V +A P+ VAVK + E A+ E+ + E+K LT I H
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVK-----MLKEGATASEYKALMTELKILTHIGH 89
Query: 495 R-NIVKFYGFCSHARHSF-IVYEYLEMGSLA---------MILSNDAA------------ 531
N+V G C+ ++ EY + G+L+ L+ DAA
Sbjct: 90 HLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNKDAALHMEPKKEKMEP 149
Query: 532 AKDLGWTKRMNVI--------------KGVVDALSYMHNDCF--PPI------------- 562
+ G R++ + K + D +D F PI
Sbjct: 150 GLEQGKKPRLDSVTSSESFASSGFQEDKSLSDVEEEEDSDGFYKEPITMEDLISYSFQVA 209
Query: 563 -----------VHRDISSKNVLLDLENEAHVSDFGTAK--FLKPDSSNWAELAGTYGYVA 609
+HRD++++N+LL N + DFG A+ + PD + ++A
Sbjct: 210 RGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMA 269
Query: 610 PELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPT 668
PE + + K DV+S+GVL E+ G P L + M P T
Sbjct: 270 PESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMR-MRAPEYST 328
Query: 669 PSHNVQDKLISIMEVAISCLDESPESRPT----IQKVSQLL 705
P I ++ + C P+ RP ++K+ LL
Sbjct: 329 P---------EIYQIMLDCWHRDPKERPRFAELVEKLGDLL 360
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 86/193 (44%), Gaps = 31/193 (16%)
Query: 463 VAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGFCSHARHSFIVYEYLEMGS 521
VAVK S + S + ++E++ + I +H+NI+ G C+ +++ EY G+
Sbjct: 52 VAVKMLKSDATEKDLS--DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 109
Query: 522 LAMILS------------------NDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
L L ++KDL ++ V + Y+ + +
Sbjct: 110 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDL-----VSCAYQVARGMEYLASK---KCI 161
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT--YGYVAPELAYTMKVTEK 621
HRD++++NVL+ +N ++DFG A+ + G ++APE + T +
Sbjct: 162 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQ 221
Query: 622 CDVYSFGVLALEV 634
DV+SFGVL E+
Sbjct: 222 SDVWSFGVLLWEI 234
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 86/193 (44%), Gaps = 31/193 (16%)
Query: 463 VAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGFCSHARHSFIVYEYLEMGS 521
VAVK S + S + ++E++ + I +H+NI+ G C+ +++ EY G+
Sbjct: 63 VAVKMLKSDATEKDLS--DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 120
Query: 522 LAMILS------------------NDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
L L ++KDL ++ V + Y+ + +
Sbjct: 121 LREYLQARRPPGLEYCYNPSHNPEEQLSSKDL-----VSCAYQVARGMEYLASK---KCI 172
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT--YGYVAPELAYTMKVTEK 621
HRD++++NVL+ +N ++DFG A+ + G ++APE + T +
Sbjct: 173 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQ 232
Query: 622 CDVYSFGVLALEV 634
DV+SFGVL E+
Sbjct: 233 SDVWSFGVLLWEI 245
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 86/193 (44%), Gaps = 31/193 (16%)
Query: 463 VAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGFCSHARHSFIVYEYLEMGS 521
VAVK S + S + ++E++ + I +H+NI+ G C+ +++ EY G+
Sbjct: 63 VAVKMLKSDATEKDLS--DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 120
Query: 522 LAMILS------------------NDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
L L ++KDL ++ V + Y+ + +
Sbjct: 121 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDL-----VSCAYQVARGMEYLASK---KCI 172
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT--YGYVAPELAYTMKVTEK 621
HRD++++NVL+ +N ++DFG A+ + G ++APE + T +
Sbjct: 173 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQ 232
Query: 622 CDVYSFGVLALEV 634
DV+SFGVL E+
Sbjct: 233 SDVWSFGVLLWEI 245
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 25/219 (11%)
Query: 431 IIRVTNDFDDEHCIGKG--GQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKT 488
I+ ++ +D IG G G + + +L + E+VAVK + Q+E +N
Sbjct: 15 IMHDSDRYDFVKDIGSGNFGVARLMRDKL-TKELVAVKYIERGAAIDENVQREIINH--- 70
Query: 489 LTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVV 548
+RH NIV+F H I+ EY G L + N A + + ++
Sbjct: 71 -RSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICN---AGRFSEDEARFFFQQLL 126
Query: 549 DALSYMHNDCFPPIVHRDISSKNVLLDLENEAH--VSDFGTAK----FLKPDSSNWAELA 602
+SY H+ I HRD+ +N LLD + DFG +K +P S+
Sbjct: 127 SGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-----V 178
Query: 603 GTYGYVAPELAYTMKVTEK-CDVYSFGVLALEVIKGKHP 640
GT Y+APE+ + K DV+S GV ++ G +P
Sbjct: 179 GTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYP 217
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 86/193 (44%), Gaps = 31/193 (16%)
Query: 463 VAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGFCSHARHSFIVYEYLEMGS 521
VAVK S + S + ++E++ + I +H+NI+ G C+ +++ EY G+
Sbjct: 63 VAVKMLKSDATEKDLS--DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 120
Query: 522 LAMILS------------------NDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
L L ++KDL ++ V + Y+ + +
Sbjct: 121 LREYLQAREPPGLEYSYNPSHNPEEQLSSKDL-----VSCAYQVARGMEYLASK---KCI 172
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT--YGYVAPELAYTMKVTEK 621
HRD++++NVL+ +N ++DFG A+ + G ++APE + T +
Sbjct: 173 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQ 232
Query: 622 CDVYSFGVLALEV 634
DV+SFGVL E+
Sbjct: 233 SDVWSFGVLLWEI 245
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 86/193 (44%), Gaps = 31/193 (16%)
Query: 463 VAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGFCSHARHSFIVYEYLEMGS 521
VAVK S + S + ++E++ + I +H+NI+ G C+ +++ EY G+
Sbjct: 55 VAVKMLKSDATEKDLS--DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 112
Query: 522 LAMILS------------------NDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
L L ++KDL ++ V + Y+ + +
Sbjct: 113 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDL-----VSCAYQVARGMEYLASK---KCI 164
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT--YGYVAPELAYTMKVTEK 621
HRD++++NVL+ +N ++DFG A+ + G ++APE + T +
Sbjct: 165 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQ 224
Query: 622 CDVYSFGVLALEV 634
DV+SFGVL E+
Sbjct: 225 SDVWSFGVLLWEI 237
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 86/193 (44%), Gaps = 31/193 (16%)
Query: 463 VAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGFCSHARHSFIVYEYLEMGS 521
VAVK S + S + ++E++ + I +H+NI+ G C+ +++ EY G+
Sbjct: 56 VAVKMLKSDATEKDLS--DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 113
Query: 522 LAMILS------------------NDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
L L ++KDL ++ V + Y+ + +
Sbjct: 114 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDL-----VSCAYQVARGMEYLASK---KCI 165
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGT--YGYVAPELAYTMKVTEK 621
HRD++++NVL+ +N ++DFG A+ + G ++APE + T +
Sbjct: 166 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQ 225
Query: 622 CDVYSFGVLALEV 634
DV+SFGVL E+
Sbjct: 226 SDVWSFGVLLWEI 238
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 10/152 (6%)
Query: 493 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALS 552
+H NI+ +H ++V E + G L L K + V+ + +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGEL---LDKILRQKFFSEREASFVLHTIGKTVE 135
Query: 553 YMHNDCFPPIVHRDISSKNVLLDLENE----AHVSDFGTAKFLKPDSSNWAELAGTYGYV 608
Y+H+ +VHRD+ N+L E+ + DFG AK L+ ++ T +V
Sbjct: 136 YLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFV 192
Query: 609 APELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
APE+ E CD++S G+L ++ G P
Sbjct: 193 APEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 22/233 (9%)
Query: 420 LSFEGKIVYEEIIRVTNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVK-----KFHSPLP 473
L+ + + VY + +R +++ +G G G V A E + + VA++ KF
Sbjct: 135 LTVDDQSVYPKALR--DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSA 192
Query: 474 SEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAK 533
E E++ L + H I+K F A +IV E +E G L + + K
Sbjct: 193 READPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLK 251
Query: 534 DLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENE---AHVSDFGTAKF 590
+ T ++ + ++ A+ Y+H + I+HRD+ +NVLL + E ++DFG +K
Sbjct: 252 EA--TCKLYFYQMLL-AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 305
Query: 591 LKPDSSNWAELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHP 640
L ++S L GT Y+APE+ T D +S GV+ + G P
Sbjct: 306 LG-ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 357
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 98/222 (44%), Gaps = 24/222 (10%)
Query: 434 VTNDFDDEH----CIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKT 488
VT D DE+ IG G G V A +G+ VA+KK + + + + L E+K
Sbjct: 49 VTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAF-DVVTNAKRTLRELKI 107
Query: 489 LTGIRHRNIVKFYGFCSHA------RHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMN 542
L +H NI+ + ++V + +E +I S+ + L
Sbjct: 108 LKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSS----QPLTLEHVRY 163
Query: 543 VIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFL--KPDSSNW-- 598
+ ++ L YMH+ ++HRD+ N+L++ E + DFG A+ L P +
Sbjct: 164 FLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFM 220
Query: 599 AELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKH 639
E T Y APEL ++ + T+ D++S G + E++ +
Sbjct: 221 TEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 13/146 (8%)
Query: 563 VHRDISSKNVLLDLENEAHVSDFGTAK--FLKPDSSNWAELAGTYGYVAPELAYTMKVTE 620
+HRD++++N+LL +N + DFG A+ + PD + ++APE + T
Sbjct: 213 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 272
Query: 621 KCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLIS 679
+ DV+SFGVL E+ G P L+ M P TP
Sbjct: 273 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG-TRMRAPDYTTP---------E 322
Query: 680 IMEVAISCLDESPESRPTIQKVSQLL 705
+ + + C P RPT ++ + L
Sbjct: 323 MYQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 13/146 (8%)
Query: 563 VHRDISSKNVLLDLENEAHVSDFGTAK--FLKPDSSNWAELAGTYGYVAPELAYTMKVTE 620
+HRD++++N+LL +N + DFG A+ + PD + ++APE + T
Sbjct: 215 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 274
Query: 621 KCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLIS 679
+ DV+SFGVL E+ G P L+ M P TP
Sbjct: 275 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG-TRMRAPDYTTP---------E 324
Query: 680 IMEVAISCLDESPESRPTIQKVSQLL 705
+ + + C P RPT ++ + L
Sbjct: 325 MYQTMLDCWHGEPSQRPTFSELVEHL 350
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 98/222 (44%), Gaps = 24/222 (10%)
Query: 434 VTNDFDDEH----CIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKT 488
VT D DE+ IG G G V A +G+ VA+KK + + + + L E+K
Sbjct: 48 VTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAF-DVVTNAKRTLRELKI 106
Query: 489 LTGIRHRNIVKFYGFCSHA------RHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMN 542
L +H NI+ + ++V + +E +I S+ + L
Sbjct: 107 LKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSS----QPLTLEHVRY 162
Query: 543 VIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFL--KPDSSNW-- 598
+ ++ L YMH+ ++HRD+ N+L++ E + DFG A+ L P +
Sbjct: 163 FLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFM 219
Query: 599 AELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKH 639
E T Y APEL ++ + T+ D++S G + E++ +
Sbjct: 220 TEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 22/233 (9%)
Query: 420 LSFEGKIVYEEIIRVTNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVK-----KFHSPLP 473
L+ + + VY + +R +++ +G G G V A E + + VA++ KF
Sbjct: 121 LTVDDQSVYPKALR--DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSA 178
Query: 474 SEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAK 533
E E++ L + H I+K F A +IV E +E G L + + K
Sbjct: 179 READPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLK 237
Query: 534 DLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENE---AHVSDFGTAKF 590
+ T ++ + ++ A+ Y+H + I+HRD+ +NVLL + E ++DFG +K
Sbjct: 238 EA--TCKLYFYQMLL-AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 291
Query: 591 LKPDSSNWAELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHP 640
L ++S L GT Y+APE+ T D +S GV+ + G P
Sbjct: 292 LG-ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 343
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 10/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+ FD +G G G V + SG A+K ++ + LNE + L +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+VK + ++V EY+ G + L + R + +V Y+
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQ-IVLTFEYL 178
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ +++RD+ +N+L+D + V+DFG AK +K + W L GT Y+APE+
Sbjct: 179 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GATWT-LCGTPEYLAPEIIL 232
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
+ + D ++ GVL E+ G P
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 10/152 (6%)
Query: 493 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALS 552
+H NI+ +H ++V E + G L L K + V+ + +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGEL---LDKILRQKFFSEREASFVLHTIGKTVE 135
Query: 553 YMHNDCFPPIVHRDISSKNVLLDLENE----AHVSDFGTAKFLKPDSSNWAELAGTYGYV 608
Y+H+ +VHRD+ N+L E+ + DFG AK L+ ++ T +V
Sbjct: 136 YLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFV 192
Query: 609 APELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
APE+ E CD++S G+L ++ G P
Sbjct: 193 APEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 13/146 (8%)
Query: 563 VHRDISSKNVLLDLENEAHVSDFGTAK--FLKPDSSNWAELAGTYGYVAPELAYTMKVTE 620
+HRD++++N+LL +N + DFG A+ + PD + ++APE + T
Sbjct: 220 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 279
Query: 621 KCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLIS 679
+ DV+SFGVL E+ G P L+ M P TP
Sbjct: 280 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG-TRMRAPDYTTP---------E 329
Query: 680 IMEVAISCLDESPESRPTIQKVSQLL 705
+ + + C P RPT ++ + L
Sbjct: 330 MYQTMLDCWHGEPSQRPTFSELVEHL 355
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 13/146 (8%)
Query: 563 VHRDISSKNVLLDLENEAHVSDFGTAK--FLKPDSSNWAELAGTYGYVAPELAYTMKVTE 620
+HRD++++N+LL +N + DFG A+ + PD + ++APE + T
Sbjct: 222 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 281
Query: 621 KCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQDKLIS 679
+ DV+SFGVL E+ G P L+ M P TP
Sbjct: 282 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG-TRMRAPDYTTP---------E 331
Query: 680 IMEVAISCLDESPESRPTIQKVSQLL 705
+ + + C P RPT ++ + L
Sbjct: 332 MYQTMLDCWHGEPSQRPTFSELVEHL 357
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 81/180 (45%), Gaps = 11/180 (6%)
Query: 465 VKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAM 524
+KK S ++E EV L + H NI+ + + ++ E + G L
Sbjct: 45 IKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFD 104
Query: 525 ILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLEN----EA 580
L A + L + + IK ++D ++Y+H I H D+ +N++L +N
Sbjct: 105 FL---AQKESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 581 HVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
+ DFG A ++ D + + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 159 KLIDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 81/165 (49%), Gaps = 9/165 (5%)
Query: 479 QQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWT 538
Q+ E + ++H NIV+ + S H +++++ + G L + A +
Sbjct: 54 HQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL---FEDIVAREYYSEA 110
Query: 539 KRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLL--DLENEA-HVSDFGTAKFLKPDS 595
+ I+ +++A+ + H +VHR++ +N+LL L+ A ++DFG A ++ +
Sbjct: 111 DASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ 167
Query: 596 SNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
W AGT GY++PE+ + D+++ GV+ ++ G P
Sbjct: 168 QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 22/226 (9%)
Query: 427 VYEEIIRVTNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVK-----KFHSPLPSEMASQQ 480
VY + +R +++ +G G G V A E + + VA+K KF E
Sbjct: 9 VYPKALR--DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL 66
Query: 481 EFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKR 540
E++ L + H I+K F A +IV E +E G L + + K+ T +
Sbjct: 67 NVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEA--TCK 123
Query: 541 MNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENE---AHVSDFGTAKFLKPDSSN 597
+ + ++ A+ Y+H + I+HRD+ +NVLL + E ++DFG +K L ++S
Sbjct: 124 LYFYQMLL-AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSL 178
Query: 598 WAELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHP 640
L GT Y+APE+ T D +S GV+ + G P
Sbjct: 179 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 224
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 22/226 (9%)
Query: 427 VYEEIIRVTNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVK-----KFHSPLPSEMASQQ 480
VY + +R +++ +G G G V A E + + VA+K KF E
Sbjct: 3 VYPKALR--DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL 60
Query: 481 EFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKR 540
E++ L + H I+K F A +IV E +E G L + + K+ T +
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEA--TCK 117
Query: 541 MNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENE---AHVSDFGTAKFLKPDSSN 597
+ + ++ A+ Y+H + I+HRD+ +NVLL + E ++DFG +K L ++S
Sbjct: 118 LYFYQMLL-AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSL 172
Query: 598 WAELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHP 640
L GT Y+APE+ T D +S GV+ + G P
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 444 IGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G G G V+K E +G +A K + M ++E NE+ + + H N+++ Y
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKT---RGMKDKEEVKNEISVMNQLDHANLIQLYD 153
Query: 503 FCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPI 562
+V EY++ G L + +++ +L + +K + + + +MH I
Sbjct: 154 AFESKNDIVLVMEYVDGGELFDRIIDESY--NLTELDTILFMKQICEGIRHMHQ---MYI 208
Query: 563 VHRDISSKNVLLDLENEAHVS--DFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTE 620
+H D+ +N+L + + DFG A+ KP GT ++APE+ V+
Sbjct: 209 LHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF-GTPEFLAPEVVNYDFVSF 267
Query: 621 KCDVYSFGVLALEVIKGKHP 640
D++S GV+A ++ G P
Sbjct: 268 PTDMWSVGVIAYMLLSGLSP 287
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 91/201 (45%), Gaps = 18/201 (8%)
Query: 444 IGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G+G +VYK + + +VA+K+ L E + + EV L ++H NIV +
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIR--LEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 503 FCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIK----GVVDALSYMHNDC 558
+ +V+EYL+ L L D G M+ +K ++ L+Y H
Sbjct: 68 IIHTEKSLTLVFEYLD-KDLKQYLD------DCGNIINMHNVKLFLFQLLRGLAYCHRQ- 119
Query: 559 FPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPE-LAYTMK 617
++HRD+ +N+L++ E ++DFG A+ + + T Y P+ L +
Sbjct: 120 --KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTD 177
Query: 618 VTEKCDVYSFGVLALEVIKGK 638
+ + D++ G + E+ G+
Sbjct: 178 YSTQIDMWGVGCIFYEMATGR 198
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 22/226 (9%)
Query: 427 VYEEIIRVTNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVK-----KFHSPLPSEMASQQ 480
VY + +R +++ +G G G V A E + + VA+K KF E
Sbjct: 2 VYPKALR--DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL 59
Query: 481 EFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKR 540
E++ L + H I+K F A +IV E +E G L + + K+ T +
Sbjct: 60 NVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEA--TCK 116
Query: 541 MNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENE---AHVSDFGTAKFLKPDSSN 597
+ + ++ A+ Y+H + I+HRD+ +NVLL + E ++DFG +K L ++S
Sbjct: 117 LYFYQMLL-AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSL 171
Query: 598 WAELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHP 640
L GT Y+APE+ T D +S GV+ + G P
Sbjct: 172 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 217
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 22/226 (9%)
Query: 427 VYEEIIRVTNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVK-----KFHSPLPSEMASQQ 480
VY + +R +++ +G G G V A E + + VA+K KF E
Sbjct: 3 VYPKALR--DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL 60
Query: 481 EFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKR 540
E++ L + H I+K F A +IV E +E G L + + K+ T +
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEA--TCK 117
Query: 541 MNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENE---AHVSDFGTAKFLKPDSSN 597
+ + ++ A+ Y+H + I+HRD+ +NVLL + E ++DFG +K L ++S
Sbjct: 118 LYFYQMLL-AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSL 172
Query: 598 WAELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHP 640
L GT Y+APE+ T D +S GV+ + G P
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 14/165 (8%)
Query: 483 LNEVKTLTGIR-HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRM 541
L EV L + H NI++ F+V++ ++ G L L+ + K M
Sbjct: 58 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 117
Query: 542 NVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAEL 601
+ V+ AL ++ IVHRD+ +N+LLD + ++DFG + L P E+
Sbjct: 118 RALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLREV 170
Query: 602 AGTYGYVAPELAYTMK------VTEKCDVYSFGVLALEVIKGKHP 640
GT Y+APE+ ++ D++S GV+ ++ G P
Sbjct: 171 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 94/219 (42%), Gaps = 37/219 (16%)
Query: 444 IGKGGQGSVYKAEL-------PSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RH 494
+G+G G V AE P + VAVK + S + ++E++ + I +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS--DLVSEMEMMKMIGKH 100
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILS-------------NDAAAKDLGWTKRM 541
+NI+ G C+ +++ Y G+L L N + + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 542 NVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAEL 601
+ + + Y+ + +HRD++++NVL+ N ++DFG A+ D +N
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYY 213
Query: 602 AGTYG------YVAPELAYTMKVTEKCDVYSFGVLALEV 634
T ++APE + T + DV+SFGVL E+
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+ FD +G G G V + SG A+K ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+VK + ++V EY+ G + L + R + +V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP--HARFYAAQ-IVLTFEYL 157
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ +++RD+ +N+L+D + V+DFG AK +K W L GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIIL 211
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 112/240 (46%), Gaps = 33/240 (13%)
Query: 418 SVLSFEGKIVYEEIIRVTNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEM 476
S S GK +E++ ++T++ +G+G V A L +G+ AVK
Sbjct: 2 STDSLPGK--FEDMYKLTSEL-----LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGH-- 52
Query: 477 ASQQEFLNEVKTLTGIR-HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDL 535
S+ EV+TL + ++NI++ F ++V+E L+ GS IL++ K
Sbjct: 53 -SRSRVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGS---ILAHIQKQKHF 108
Query: 536 GWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEA---HVSDFGTAKFLK 592
+ V++ V AL ++H I HRD+ +N+L + + + DF +K
Sbjct: 109 NEREASRVVRDVAAALDFLHTK---GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMK 165
Query: 593 PDSS----NWAEL---AGTYGYVAPELA--YTMKVT---EKCDVYSFGVLALEVIKGKHP 640
++S EL G+ Y+APE+ +T + T ++CD++S GV+ ++ G P
Sbjct: 166 LNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 93/203 (45%), Gaps = 22/203 (10%)
Query: 444 IGKGGQGSV---YKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
IG G QG V Y A L VA+KK P ++ +++ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 88
Query: 501 YGFCSHAR------HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+ + +IV E ++ +L ++ + + + + ++ ++ + ++
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 142
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ I+HRD+ N+++ + + DFG A+ E+ Y Y APE+
Sbjct: 143 HS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRY-YRAPEVIL 198
Query: 615 TMKVTEKCDVYSFGVLALEVIKG 637
M E D++S G + E+IKG
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 22/226 (9%)
Query: 427 VYEEIIRVTNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVK-----KFHSPLPSEMASQQ 480
VY + +R +++ +G G G V A E + + VA+K KF E
Sbjct: 3 VYPKALR--DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL 60
Query: 481 EFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKR 540
E++ L + H I+K F A +IV E +E G L + + K+ T +
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEA--TCK 117
Query: 541 MNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENE---AHVSDFGTAKFLKPDSSN 597
+ + ++ A+ Y+H + I+HRD+ +NVLL + E ++DFG +K L ++S
Sbjct: 118 LYFYQMLL-AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSL 172
Query: 598 WAELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHP 640
L GT Y+APE+ T D +S GV+ + G P
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+ FD +G G G V + SG A+K ++ + LNE + L +
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+VK + ++V EY+ G + L + R + +V Y+
Sbjct: 96 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP--HARFYAAQ-IVLTFEYL 152
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ +++RD+ +N+L+D + V+DFG AK +K W L GT Y+APE+
Sbjct: 153 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIIL 206
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
+ + D ++ GVL E+ G P
Sbjct: 207 SKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+ FD +G G G V + SG A+K ++ + LNE + L +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+VK + ++V EY+ G + L + R + +V Y+
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP--HARFYAAQ-IVLTFEYL 178
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ +++RD+ +N+L+D + V+DFG AK +K W L GT Y+APE+
Sbjct: 179 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIIL 232
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
+ + D ++ GVL E+ G P
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+ FD +G G G V + SG A+K ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+VK + ++V EY+ G + L + R + +V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQ-IVLTFEYL 157
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ +++RD+ +N+L+D + V+DFG AK +K W L GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIIL 211
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+ FD +G G G V + SG A+K ++ + LNE + L +
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+VK + ++V EY+ G + L + R + +V Y+
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQ-IVLTFEYL 158
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ +++RD+ +N+L+D + V+DFG AK +K W L GT Y+APE+
Sbjct: 159 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIIL 212
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
+ + D ++ GVL E+ G P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+ FD +G G G V + SG A+K ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+VK + ++V EY+ G + L + R + +V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQ-IVLTFEYL 157
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ +++RD+ +N+L+D + V+DFG AK +K W L GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LXGTPEYLAPEIIL 211
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+ FD +G G G V + SG A+K ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+VK + ++V EY+ G + L + R + +V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP--HARFYAAQ-IVLTFEYL 157
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ +++RD+ +N+L+D + V+DFG AK +K W L GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIIL 211
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+ FD +G G G V + SG A+K ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+VK + ++V EY+ G + L + R + +V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQ-IVLTFEYL 157
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ +++RD+ +N+L+D + V+DFG AK +K W L GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIIL 211
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+ FD +G G G V + SG A+K ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+VK + ++V EY+ G + L + R + +V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP--HARFYAAQ-IVLTFEYL 157
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ +++RD+ +N+L+D + V+DFG AK +K W L GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIIL 211
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+ FD +G G G V + SG A+K ++ + LNE + L +
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+VK + ++V EY+ G + L + R + +V Y+
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQ-IVLTFEYL 144
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ +++RD+ +N+L+D + V+DFG AK +K W L GT Y+APE+
Sbjct: 145 HS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIIL 198
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
+ + D ++ GVL E+ G P
Sbjct: 199 SKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 90/206 (43%), Gaps = 10/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+ F+ IG G G V + + +G A+K ++ + LNE + L +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+VK + ++V EY+ G + L + R + +V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP--HARFYAAQ-IVLTFEYL 157
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ +++RD+ +N+L+D + V+DFG AK +K W L GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLAPEIIL 211
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+ FD +G G G V + SG A+K ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+VK + ++V EY+ G + L + R + +V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQ-IVLTFEYL 157
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ +++RD+ +N+L+D + V+DFG AK +K W L GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIIL 211
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+ FD +G G G V + SG A+K ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+VK + ++V EY+ G + L + R + +V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQ-IVLTFEYL 157
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ +++RD+ +N+L+D + V+DFG AK +K W L GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIIL 211
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+ FD +G G G V + SG A+K ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+VK + ++V EY+ G + L + R + +V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQ-IVLTFEYL 157
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ +++RD+ +N+L+D + V+DFG AK +K W L GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIIL 211
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 14/165 (8%)
Query: 483 LNEVKTLTGIR-HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRM 541
L EV L + H NI++ F+V++ ++ G L L+ + K M
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 130
Query: 542 NVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAEL 601
+ V+ AL ++ IVHRD+ +N+LLD + ++DFG + L P E+
Sbjct: 131 RALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLREV 183
Query: 602 AGTYGYVAPELAYTMK------VTEKCDVYSFGVLALEVIKGKHP 640
GT Y+APE+ ++ D++S GV+ ++ G P
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 87/206 (42%), Gaps = 10/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+ FD +G G G V + SG A+K ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+VK + ++V EY+ G + S+ +V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFAEPHARFYAAQIVLTFEYL 157
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ +++RD+ +N+L+D + V+DFG AK +K W L GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIIL 211
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 94/219 (42%), Gaps = 37/219 (16%)
Query: 444 IGKGGQGSVYKAEL-------PSGEI-VAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RH 494
+G+G G V AE P + VAVK + S + ++E++ + I +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS--DLVSEMEMMKMIGKH 100
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILS-------------NDAAAKDLGWTKRM 541
+NI+ G C+ +++ Y G+L L N + + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 542 NVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAEL 601
+ + + Y+ + +HRD++++NVL+ N ++DFG A+ D +N
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYY 213
Query: 602 AGTYG------YVAPELAYTMKVTEKCDVYSFGVLALEV 634
T ++APE + T + DV+SFGVL E+
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 90/206 (43%), Gaps = 10/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+ F+ IG G G V + + +G A+K ++ + LNE + L +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+VK + ++V EY+ G + L + R + +V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP--HARFYAAQ-IVLTFEYL 157
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ +++RD+ +N+L+D + V+DFG AK +K W L GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLAPEIIL 211
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 94/203 (46%), Gaps = 22/203 (10%)
Query: 444 IGKGGQGSV---YKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
IG G QG V Y A L VA+KK P ++ +++ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGL 88
Query: 501 YGFCSHAR------HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+ + +IV E ++ +L+ ++ + + + + ++ ++ + ++
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQMELDHERMSY-----LLYQMLVGIKHL 142
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ I+HRD+ N+++ + + DFG A+ S T Y APE+
Sbjct: 143 HSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 615 TMKVTEKCDVYSFGVLALEVIKG 637
M E D++S GV+ E+IKG
Sbjct: 199 GMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG 606
+V Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 136 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWT-LCGTPE 189
Query: 607 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 190 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 112/277 (40%), Gaps = 33/277 (11%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
IGKG G VY GE VA++ +E + F EV RH N+V F G
Sbjct: 41 IGKGRFGQVYHGRW-HGE-VAIRLIDIERDNE-DQLKAFKREVMAYRQTRHENVVLFMGA 97
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
C H I+ + +L ++ + D+ T++ + + +V + Y+H I+
Sbjct: 98 CMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQ--IAQEIVKGMGYLHAKG---IL 152
Query: 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAE-----LAGTYGYVAPELAYTMK- 617
H+D+ SKNV D + ++DFG + E G ++APE+ +
Sbjct: 153 HKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSP 211
Query: 618 --------VTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTP 669
++ DV++ G + E+ H R++ E + +M P
Sbjct: 212 DTEEDKLPFSKHSDVFALGTIWYEL----HAREWPFKTQPA----EAIIWQMGTGMKPNL 263
Query: 670 SHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706
S K IS ++ + C E RPT K+ +L+
Sbjct: 264 SQIGMGKEIS--DILLFCWAFEQEERPTFTKLMDMLE 298
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG 606
+V Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWT-LCGTPE 204
Query: 607 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 94/203 (46%), Gaps = 22/203 (10%)
Query: 444 IGKGGQGSV---YKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
IG G QG V Y A L VA+KK P ++ +++ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGL 88
Query: 501 YGFCSHAR------HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+ + +IV E ++ +L+ ++ + + + + ++ ++ + ++
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQMELDHERMSY-----LLYQMLVGIKHL 142
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ I+HRD+ N+++ + + DFG A+ S T Y APE+
Sbjct: 143 HSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 615 TMKVTEKCDVYSFGVLALEVIKG 637
M E D++S GV+ E+IKG
Sbjct: 199 GMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 112/240 (46%), Gaps = 33/240 (13%)
Query: 418 SVLSFEGKIVYEEIIRVTNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEM 476
S SF G+ +E++ ++ D +G+G V L + + AVK P +
Sbjct: 2 STDSFSGR--FEDVYQLQEDV-----LGEGAHARVQTCINLITSQEYAVKIIEKQ-PGHI 53
Query: 477 ASQQEFLNEVKTLTGIR-HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDL 535
S+ EV+ L + HRN+++ F ++V+E + GS ILS+ +
Sbjct: 54 RSR--VFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS---ILSHIHKRRHF 108
Query: 536 GWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENE---AHVSDFGTAKFLK 592
+ V++ V AL ++HN I HRD+ +N+L + N+ + DFG +K
Sbjct: 109 NELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIK 165
Query: 593 PDSS----NWAEL---AGTYGYVAPEL--AYTMKVT---EKCDVYSFGVLALEVIKGKHP 640
+ + EL G+ Y+APE+ A++ + + ++CD++S GV+ ++ G P
Sbjct: 166 LNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 128/329 (38%), Gaps = 37/329 (11%)
Query: 18 SIPSEIGR-LKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKE--YGNL 74
+I E R L +L L+L +K+ P + L + L L+ LS A+ K+ + NL
Sbjct: 63 TIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNL 122
Query: 75 VKLTLLTLENNQLRGPI--PNLRNLTSLVRVRLNQNHLTGNISESFGIHP----NLAFID 128
LT L L NQ+R P+ L SL + + N + + + P L+F
Sbjct: 123 KALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIF--LVCEHELEPLQGKTLSFFS 180
Query: 129 LSHNYFYGEISSDWGRCPK------LGTLDFSSN----NITGSMPAEIIHSSQLKVLDLS 178
L+ N Y +S DWG+C L LD S N +ITG+ I S + +
Sbjct: 181 LAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSL--IL 238
Query: 179 SNHIVGE-MPXXXXXXXXXXXXXXXXXXXCGQLSLELGSLTQXXXXXXXXXXXXXXIPKS 237
++HI+G L L G + +
Sbjct: 239 AHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLN-------------SRV 285
Query: 238 LGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNL 297
L L LNL+ N+ K L +L L+LS+N LGE S + + ++L
Sbjct: 286 FETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDL 345
Query: 298 SHNNLSGFIPSCFEELHGLSYIDISYNEL 326
N+++ F+ L L +D+ N L
Sbjct: 346 QKNHIAIIQDQTFKFLEKLQTLDLRDNAL 374
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 262 LEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDI 321
E L HL L L+HN+L P ++ +L L+L+ N L+ + S + L +DI
Sbjct: 476 FEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLT--VLSHNDLPANLEILDI 533
Query: 322 SYNELHGSIPNSTAFRDAPMEALQGNKGLC 351
S N+L PN F + + NK +C
Sbjct: 534 SRNQLLA--PNPDVFVSLSVLDITHNKFIC 561
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG 606
+V Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 171 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 224
Query: 607 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG 606
+V Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 204
Query: 607 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG 606
+V Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 203
Query: 607 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG 606
+V Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 203
Query: 607 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG 606
+V Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 143 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 196
Query: 607 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 197 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 90/206 (43%), Gaps = 10/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+ F+ IG G G V + + +G A+K ++ + LNE + L +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+VK + ++V EY+ G + L + R + +V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQ-IVLTFEYL 157
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ +++RD+ +N+L+D + V+DFG AK +K W L GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLAPEIIL 211
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG 606
+V Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 203
Query: 607 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG 606
+V Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 203
Query: 607 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG 606
+V Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 204
Query: 607 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG 606
+V Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 203
Query: 607 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG 606
+V Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 143 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 196
Query: 607 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 197 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG 606
+V Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 204
Query: 607 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG 606
+V Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 204
Query: 607 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG 606
+V Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 203
Query: 607 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 103/240 (42%), Gaps = 28/240 (11%)
Query: 411 GNAPGFLSVLSFEGKIVYEEIIRVTNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFH 469
G G+L++ G Y+ I ND ++ +G G G V+K +G ++AVK+
Sbjct: 7 GKQTGYLTI----GGQRYQAEI---NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMR 59
Query: 470 SPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSND 529
E +++ ++ L IV+ +G FI E MG+ A L
Sbjct: 60 RSGNKE-ENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMEL--MGTCAEKLKKR 116
Query: 530 AAA----KDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDF 585
+ LG +M V +V AL Y+ ++HRD+ N+LLD + + DF
Sbjct: 117 MQGPIPERILG---KMTV--AIVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDF 169
Query: 586 GTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTE-----KCDVYSFGVLALEVIKGKHP 640
G + L D + AG Y+APE T+ + DV+S G+ +E+ G+ P
Sbjct: 170 GISGRLVDDKAK-DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG 606
+V Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 204
Query: 607 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG 606
+V Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 203
Query: 607 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG 606
+V Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 203
Query: 607 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG 606
+V Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 203
Query: 607 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 98/236 (41%), Gaps = 32/236 (13%)
Query: 412 NAPGFLSVLSFEGKIVYEEIIRVTNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHS 470
PG +SV + + R+T +G+G G VYKA + + E VA+K+
Sbjct: 17 QGPGSMSVSAAPSATSIDRYRRITK-------LGEGTYGEVYKAIDTVTNETVAIKRIRL 69
Query: 471 PLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDA 530
E + EV L ++HRNI++ H +++EY E + N
Sbjct: 70 EHEEEGVPGTA-IREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPD 128
Query: 531 AAKDLGWTKRMNVIKG----VVDALSYMHN-DCFPPIVHRDISSKNVLLDLENEAH---- 581
+ M VIK +++ +++ H+ C +HRD+ +N+LL + + +
Sbjct: 129 VS--------MRVIKSFLYQLINGVNFCHSRRC----LHRDLKPQNLLLSVSDASETPVL 176
Query: 582 -VSDFGTAKFLKPDSSNWAELAGTYGYVAPE-LAYTMKVTEKCDVYSFGVLALEVI 635
+ DFG A+ + T Y PE L + + D++S + E++
Sbjct: 177 KIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 11/163 (6%)
Query: 484 NEVKTLTGIRHRNIVKFYG--FCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRM 541
E++ L +RH+N+++ + + ++V EY G M+ + K +
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEML--DSVPEKRFPVCQAH 112
Query: 542 NVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN--WA 599
++D L Y+H+ IVH+DI N+LL +S G A+ L P +++
Sbjct: 113 GYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCR 169
Query: 600 ELAGTYGYVAPELAYTMKVTE--KCDVYSFGVLALEVIKGKHP 640
G+ + PE+A + K D++S GV + G +P
Sbjct: 170 TSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+ FD +G G G V + SG A+K ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+VK + ++V EY+ G + L + R + +V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQ-IVLTFEYL 157
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ +++RD+ +N+++D + V+DFG AK +K W L GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIII 211
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 16/187 (8%)
Query: 461 EIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMG 520
+IV V KF S S S ++ E ++H +IV+ S ++V+E+++
Sbjct: 55 KIVDVAKFTS---SPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGA 111
Query: 521 SLAMILSNDAAAKDLGWTKRMNV----IKGVVDALSYMHNDCFPPIVHRDISSKNVLL-D 575
L + A D G+ V ++ +++AL Y H++ I+HRD+ +NVLL
Sbjct: 112 DLCFEIVKRA---DAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPENVLLAS 165
Query: 576 LENEAHVS--DFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALE 633
EN A V DFG A L GT ++APE+ + DV+ GV+
Sbjct: 166 KENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFI 225
Query: 634 VIKGKHP 640
++ G P
Sbjct: 226 LLSGCLP 232
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 90/218 (41%), Gaps = 26/218 (11%)
Query: 434 VTNDFDDEHCIGKGGQGSVYKAEL----PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTL 489
+ +D D + G G+ A L S E+VAVK + ++E +N
Sbjct: 13 IMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINH---- 68
Query: 490 TGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVD 549
+RH NIV+F H IV EY G L + N A + + ++
Sbjct: 69 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICN---AGRFSEDEARFFFQQLIS 125
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAH--VSDFGTAK----FLKPDSSNWAELAG 603
+SY H + HRD+ +N LLD + DFG +K +P S+ G
Sbjct: 126 GVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-----VG 177
Query: 604 TYGYVAPELAYTMKVTEK-CDVYSFGVLALEVIKGKHP 640
T Y+APE+ + K DV+S GV ++ G +P
Sbjct: 178 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 215
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+ FD +G G G V + SG A+K ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+VK + ++V EY+ G + L + R + +V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQ-IVLTFEYL 157
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ +++RD+ +N+L+D + V+DFG AK +K W L GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIIL 211
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
+ + D ++ GVL ++ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG 606
+V Y+H+ +++RD+ +N+++D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVK--GRTWX-LCGTPE 203
Query: 607 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG 606
+V Y+H+ +++RD+ +N+L+D + V+DFG AK +K W L GT
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPE 204
Query: 607 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG 606
+V Y+H+ +++RD+ +N+++D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPE 203
Query: 607 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 89/218 (40%), Gaps = 26/218 (11%)
Query: 434 VTNDFDDEHCIGKGGQGSVYKAEL----PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTL 489
+ +D D + G G+ A L S E+VAVK ++E +N
Sbjct: 14 IMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINH---- 69
Query: 490 TGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVD 549
+RH NIV+F H IV EY G L + N A + + ++
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICN---AGRFSEDEARFFFQQLIS 126
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAH--VSDFGTAK----FLKPDSSNWAELAG 603
+SY H + HRD+ +N LLD + DFG +K +P S+ G
Sbjct: 127 GVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-----VG 178
Query: 604 TYGYVAPELAYTMKVTEK-CDVYSFGVLALEVIKGKHP 640
T Y+APE+ + K DV+S GV ++ G +P
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 10/152 (6%)
Query: 493 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALS 552
+H NI+ ++ ++V E ++ G L L K + V+ + +
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGEL---LDKILRQKFFSEREASAVLFTITKTVE 130
Query: 553 YMHNDCFPPIVHRDISSKNVLLDLEN----EAHVSDFGTAKFLKPDSSNWAELAGTYGYV 608
Y+H +VHRD+ N+L E+ + DFG AK L+ ++ T +V
Sbjct: 131 YLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFV 187
Query: 609 APELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
APE+ CD++S GVL ++ G P
Sbjct: 188 APEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 91/218 (41%), Gaps = 26/218 (11%)
Query: 434 VTNDFDDEHCIGKGGQGSVYKAEL----PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTL 489
+ +D D + G G+ A L + E+VAVK + ++E +N
Sbjct: 14 IMHDSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINH---- 69
Query: 490 TGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVD 549
+RH NIV+F H IV EY G L + N A + + ++
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICN---AGRFSEDEARFFFQQLIS 126
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAH--VSDFGTAK----FLKPDSSNWAELAG 603
+SY H + HRD+ +N LLD ++DFG +K +P S+ G
Sbjct: 127 GVSYAHA---MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSA-----VG 178
Query: 604 TYGYVAPELAYTMKVTEK-CDVYSFGVLALEVIKGKHP 640
T Y+APE+ + K DV+S GV ++ G +P
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG 606
+V Y+H+ +++RD+ +N+++D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVK--GRTWX-LCGTPE 203
Query: 607 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 113/240 (47%), Gaps = 33/240 (13%)
Query: 418 SVLSFEGKIVYEEIIRVTNDFDDEHCIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEM 476
S SF G+ +E++ ++ D +G+G V L + + AVK P +
Sbjct: 2 STDSFSGR--FEDVYQLQEDV-----LGEGAHARVQTCINLITSQEYAVKIIEKQ-PGHI 53
Query: 477 ASQQEFLNEVKTLTGIR-HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDL 535
S+ EV+ L + HRN+++ F ++V+E + GS ILS+ +
Sbjct: 54 RSR--VFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS---ILSHIHKRRHF 108
Query: 536 GWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENE---AHVSDF--GTAKF 590
+ V++ V AL ++HN I HRD+ +N+L + N+ + DF G+
Sbjct: 109 NELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIK 165
Query: 591 LKPDSS--NWAEL---AGTYGYVAPEL--AYTMKVT---EKCDVYSFGVLALEVIKGKHP 640
L D S + EL G+ Y+APE+ A++ + + ++CD++S GV+ ++ G P
Sbjct: 166 LNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 112/261 (42%), Gaps = 29/261 (11%)
Query: 444 IGKGGQGSVYKAELPS--GEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFY 501
+G+G G VY+ + GE + V + ++++F++E + + H +IVK
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 502 GFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIK---GVVDALSYMHN-D 557
G ++I+ E G L L + + K + ++ + A++Y+ + +
Sbjct: 92 GIIEE-EPTWIIMELYPYGELGHYLERNKNS-----LKVLTLVLYSLQICKAMAYLESIN 145
Query: 558 CFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG-TYGYVAPELAYTM 616
C VHRDI+ +N+L+ + DFG +++++ + A + +++PE
Sbjct: 146 C----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR 201
Query: 617 KVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQD 675
+ T DV+ F V E++ GK P + I + E D RLP P
Sbjct: 202 RFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV------IGVLEKGD-RLPKPDL-CPP 253
Query: 676 KLISIMEVAISCLDESPESRP 696
L ++M C D P RP
Sbjct: 254 VLYTLM---TRCWDYDPSDRP 271
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 112/261 (42%), Gaps = 29/261 (11%)
Query: 444 IGKGGQGSVYKAELPS--GEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFY 501
+G+G G VY+ + GE + V + ++++F++E + + H +IVK
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 502 GFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIK---GVVDALSYMHN-D 557
G ++I+ E G L L + + K + ++ + A++Y+ + +
Sbjct: 80 GIIEE-EPTWIIMELYPYGELGHYLERNKNS-----LKVLTLVLYSLQICKAMAYLESIN 133
Query: 558 CFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG-TYGYVAPELAYTM 616
C VHRDI+ +N+L+ + DFG +++++ + A + +++PE
Sbjct: 134 C----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR 189
Query: 617 KVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQD 675
+ T DV+ F V E++ GK P + I + E D RLP P
Sbjct: 190 RFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV------IGVLEKGD-RLPKPDL-CPP 241
Query: 676 KLISIMEVAISCLDESPESRP 696
L ++M C D P RP
Sbjct: 242 VLYTLM---TRCWDYDPSDRP 259
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG 606
+V Y+H+ +++RD+ +N+++D + V+DFG AK +K W L GT
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPE 204
Query: 607 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG 606
+V Y+H+ +++RD+ +N+++D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPE 203
Query: 607 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG 606
+V Y+H+ +++RD+ +N+++D + V+DFG AK +K W L GT
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPE 204
Query: 607 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG 606
+V Y+H+ +++RD+ +N+++D + V+DFG AK +K W L GT
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPE 204
Query: 607 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG 606
+V Y+H+ +++RD+ +N+++D + V+DFG AK +K W L GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPE 203
Query: 607 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYG 606
+V Y+H+ +++RD+ +N+++D + V+DFG AK +K W L GT
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPE 204
Query: 607 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y+APE+ + + D ++ GVL E+ G P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 106/271 (39%), Gaps = 41/271 (15%)
Query: 444 IGKGGQGSVYKAELPSGEI-VAVKKF-------HSPLPSEMASQQEFLNEVKTLTGIRHR 495
+GKGG G+V+ + + VA+K SPL + E K G H
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 496 NIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAK-DLGWTKRMNVIKGVVDALSYM 554
+++ + +V LE A L + K LG VV A+ +
Sbjct: 99 GVIRLLDWFETQEGFMLV---LERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHC 155
Query: 555 HNDCFPPIVHRDISSKNVLLDLENE-AHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELA 613
H+ +VHRDI +N+L+DL A + DFG+ L + + GT Y PE
Sbjct: 156 HSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALLH--DEPYTDFDGTRVYSPPEWI 210
Query: 614 YTMKVTE-KCDVYSFGVLALEVIKGKHP--RDFXXXXXXXXXNLEIALNEMLDPRLPTPS 670
+ V+S G+L +++ G P RD E+L+ L P+
Sbjct: 211 SRHQYHALPATVWSLGILLYDMVCGDIPFERD----------------QEILEAELHFPA 254
Query: 671 HNVQDKLISIMEVAISCLDESPESRPTIQKV 701
H D I CL P SRP+++++
Sbjct: 255 HVSPDCCALIRR----CLAPKPSSRPSLEEI 281
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 112/261 (42%), Gaps = 29/261 (11%)
Query: 444 IGKGGQGSVYKAELPS--GEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFY 501
+G+G G VY+ + GE + V + ++++F++E + + H +IVK
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 502 GFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIK---GVVDALSYMHN-D 557
G ++I+ E G L L + + K + ++ + A++Y+ + +
Sbjct: 76 GIIEE-EPTWIIMELYPYGELGHYLERNKNS-----LKVLTLVLYSLQICKAMAYLESIN 129
Query: 558 CFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG-TYGYVAPELAYTM 616
C VHRDI+ +N+L+ + DFG +++++ + A + +++PE
Sbjct: 130 C----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR 185
Query: 617 KVTEKCDVYSFGVLALEVIK-GKHPRDFXXXXXXXXXNLEIALNEMLDPRLPTPSHNVQD 675
+ T DV+ F V E++ GK P + I + E D RLP P
Sbjct: 186 RFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV------IGVLEKGD-RLPKPDL-CPP 237
Query: 676 KLISIMEVAISCLDESPESRP 696
L ++M C D P RP
Sbjct: 238 VLYTLM---TRCWDYDPSDRP 255
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 93/208 (44%), Gaps = 18/208 (8%)
Query: 438 FDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNI 497
F+ E +G+G VY+ + + K + + + ++ E+ L + H NI
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQ----KPYALKVLKKTVDKKIVRTEIGVLLRLSHPNI 110
Query: 498 VKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKR--MNVIKGVVDALSYMH 555
+K +V E + G L D + +++R + +K +++A++Y+H
Sbjct: 111 IKLKEIFETPTEISLVLELVTGGELF-----DRIVEKGYYSERDAADAVKQILEAVAYLH 165
Query: 556 NDCFPPIVHRDISSKNVLLDL---ENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPEL 612
+ IVHRD+ +N+L + ++DFG +K ++ + GT GY APE+
Sbjct: 166 ENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE-HQVLMKTVCGTPGYCAPEI 221
Query: 613 AYTMKVTEKCDVYSFGVLALEVIKGKHP 640
+ D++S G++ ++ G P
Sbjct: 222 LRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 113/277 (40%), Gaps = 41/277 (14%)
Query: 444 IGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
+G+GG V E L G A+K+ L E ++E E H NI++
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRI---LCHEQQDREEAQREADMHRLFNHPNILRLVA 93
Query: 503 FCSHAR----HSFIVYEYLEMGSLAMILSNDAAAKDLG----WTKRMNVIKGVVDALSYM 554
+C R ++++ + + G+L + KD G + + ++ G+ L +
Sbjct: 94 YCLRERGAKHEAWLLLPFFKRGTL---WNEIERLKDKGNFLTEDQILWLLLGICRGLEAI 150
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGT--AKFLKPDSS-------NWAELAGTY 605
H + HRD+ N+LL E + + D G+ + + S +WA T
Sbjct: 151 HAKGY---AHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTI 207
Query: 606 GYVAPELAYTMK---VTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXXXXNLEIAL-NEM 661
Y APEL + E+ DV+S G + ++ G+ P D ++ +A+ N++
Sbjct: 208 SYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDM---VFQKGDSVALAVQNQL 264
Query: 662 LDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTI 698
P+ P S + L S+M V P RP I
Sbjct: 265 SIPQSPRHSSALWQLLNSMMTV-------DPHQRPHI 294
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 444 IGKGGQGSV---YKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
IG G QG V Y A L VA+KK P ++ +++ + E+ + + H+NI+
Sbjct: 34 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 90
Query: 501 YGFCSHAR------HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+ + +IV E ++ +L ++ + + + + ++ ++ + ++
Sbjct: 91 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 144
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ I+HRD+ N+++ + + DFG A+ S T Y APE+
Sbjct: 145 HS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMVPFVVTRYYRAPEVIL 200
Query: 615 TMKVTEKCDVYSFGVLALEVIKG 637
M E D++S G + E+IKG
Sbjct: 201 GMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 93/203 (45%), Gaps = 22/203 (10%)
Query: 444 IGKGGQGSV---YKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
IG G QG V Y A L VA+KK P ++ +++ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 88
Query: 501 YGFCSHAR------HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+ + +IV E ++ +L+ ++ + + + + ++ ++ + ++
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQMELDHERMSY-----LLYQMLCGIKHL 142
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ I+HRD+ N+++ + + DFG A+ S T Y APE+
Sbjct: 143 HSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 615 TMKVTEKCDVYSFGVLALEVIKG 637
M E D++S G + E+IKG
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 93/203 (45%), Gaps = 22/203 (10%)
Query: 444 IGKGGQGSV---YKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
IG G QG V Y A L VA+KK P ++ +++ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGL 88
Query: 501 YGFCSHAR------HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+ + +IV E ++ +L+ ++ + + + + ++ ++ + ++
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQMELDHERMSY-----LLYQMLVGIKHL 142
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ I+HRD+ N+++ + + DFG A+ S T Y APE+
Sbjct: 143 HSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 615 TMKVTEKCDVYSFGVLALEVIKG 637
M E D++S G + E+IKG
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 14/165 (8%)
Query: 483 LNEVKTLTGIR-HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRM 541
L EV L + H NI++ F+V++ ++ G L L+ + K M
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 130
Query: 542 NVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAEL 601
+ V+ AL ++ IVHRD+ +N+LLD + ++DFG + L P +
Sbjct: 131 RALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLRSV 183
Query: 602 AGTYGYVAPELAYTMK------VTEKCDVYSFGVLALEVIKGKHP 640
GT Y+APE+ ++ D++S GV+ ++ G P
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 95/231 (41%), Gaps = 30/231 (12%)
Query: 480 QEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTK 539
+ F ++ + H+++V YG C + +V E+++ GSL L + ++ W
Sbjct: 57 ESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW-- 114
Query: 540 RMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEA--------HVSDFGTAKFL 591
++ V K + A+ ++ + ++H ++ +KN+LL E + +SD G + +
Sbjct: 115 KLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV 171
Query: 592 KPDSSNWAELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXX 650
P L +V PE K + D +SFG E+ G D
Sbjct: 172 LPKDI----LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGG---DKPLSALDS 224
Query: 651 XXNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKV 701
L+ + +LP P K + + +C+D P+ RP+ + +
Sbjct: 225 QRKLQFYEDRH---QLPAP------KAAELANLINNCMDYEPDHRPSFRAI 266
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+ FD +G G G V + SG A+K ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+VK + ++V EY+ G + L + R + +V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQ-IVLTFEYL 157
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ +++RD+ +N+L+D + V+DFG AK +K W L GT Y+AP +
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPAIIL 211
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 118/291 (40%), Gaps = 25/291 (8%)
Query: 420 LSFEGKIVYEEIIRVTNDFDDEHCIGKGGQGSVYKAELPSGE----IVAVKKFHSPLPSE 475
+S E K E+++ F +GKG GSV +A+L + VAVK + + +
Sbjct: 7 ISDELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIAS 66
Query: 476 MASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHS------FIVYEYLEMGSLAMILSND 529
+ +EFL E + H ++ K G +R ++ +++ G L L
Sbjct: 67 -SDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLAS 125
Query: 530 AAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAK 589
++ +++ +VD M +HRD++++N +L + V+DFG ++
Sbjct: 126 RIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSR 185
Query: 590 FLKPDSSNWAELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFXXX 646
+ A ++A E T DV++FGV E++ +G+ P +
Sbjct: 186 KIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP--YAGI 243
Query: 647 XXXXXXNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPT 697
N I N RL P +++ + ++ C P+ RP+
Sbjct: 244 ENAEIYNYLIGGN-----RLKQPPECMEE----VYDLMYQCWSADPKQRPS 285
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 93/203 (45%), Gaps = 22/203 (10%)
Query: 444 IGKGGQGSV---YKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
IG G QG V Y A L VA+KK P ++ +++ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 88
Query: 501 YGFCSHAR------HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+ + +IV E ++ +L+ ++ + + + + ++ ++ + ++
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQMELDHERMSY-----LLYQMLCGIKHL 142
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ I+HRD+ N+++ + + DFG A+ S T Y APE+
Sbjct: 143 HS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 615 TMKVTEKCDVYSFGVLALEVIKG 637
M E D++S G + E+IKG
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 444 IGKGGQGSV---YKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
IG G QG V Y A L VA+KK P ++ +++ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 88
Query: 501 YGFCSHAR------HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+ + +IV E ++ +L ++ + + + + ++ ++ + ++
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 142
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ I+HRD+ N+++ + + DFG A+ S T Y APE+
Sbjct: 143 HS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 615 TMKVTEKCDVYSFGVLALEVIKG 637
M E D++S G + E+IKG
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 93/203 (45%), Gaps = 22/203 (10%)
Query: 444 IGKGGQGSV---YKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
IG G QG V Y A L VA+KK P ++ +++ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGL 88
Query: 501 YGFCSHAR------HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+ + +IV E ++ +L+ ++ + + + + ++ ++ + ++
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQMELDHERMSY-----LLYQMLCGIKHL 142
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ I+HRD+ N+++ + + DFG A+ S T Y APE+
Sbjct: 143 HSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 615 TMKVTEKCDVYSFGVLALEVIKG 637
M E D++S G + E+IKG
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 11/107 (10%)
Query: 542 NVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLEN--EAHVSDFGTAK-FLKPDSSNW 598
N+++ + AL Y+HN I HRDI +N L E + DFG +K F K ++ +
Sbjct: 172 NIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEY 228
Query: 599 AEL---AGTYGYVAPELAYTMKVT--EKCDVYSFGVLALEVIKGKHP 640
+ AGT +VAPE+ T + KCD +S GVL ++ G P
Sbjct: 229 YGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVP 275
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 444 IGKGGQGSV---YKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
IG G QG V Y A L VA+KK P ++ +++ + E+ + + H+NI+
Sbjct: 33 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 89
Query: 501 YGFCSHAR------HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+ + +IV E ++ +L ++ + + + + ++ ++ + ++
Sbjct: 90 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 143
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ I+HRD+ N+++ + + DFG A+ S T Y APE+
Sbjct: 144 HS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVIL 199
Query: 615 TMKVTEKCDVYSFGVLALEVIKG 637
M E D++S G + E+IKG
Sbjct: 200 GMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 444 IGKGGQGSV---YKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
IG G QG V Y A L VA+KK P ++ +++ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 88
Query: 501 YGFCSHAR------HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+ + +IV E ++ +L ++ + + + + ++ ++ + ++
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 142
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ I+HRD+ N+++ + + DFG A+ S T Y APE+
Sbjct: 143 HS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 615 TMKVTEKCDVYSFGVLALEVIKG 637
M E D++S G + E+IKG
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 95/203 (46%), Gaps = 22/203 (10%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IG G QG V A + G VAVKK P ++ +++ + E+ L + H+NI+
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAY-RELVLLKCVNHKNIISLLN 88
Query: 503 FCSHAR------HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHN 556
+ + ++V E ++ +L ++ + + + + ++ ++ + ++H+
Sbjct: 89 VFTPQKTLEEFQDVYLVMELMD-ANLCQVIHMELDHERMSY-----LLYQMLCGIKHLHS 142
Query: 557 DCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNW--AELAGTYGYVAPELAY 614
I+HRD+ N+++ + + DFG A+ S+N+ T Y APE+
Sbjct: 143 ---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TASTNFMMTPYVVTRYYRAPEVIL 196
Query: 615 TMKVTEKCDVYSFGVLALEVIKG 637
M E D++S G + E++KG
Sbjct: 197 GMGYKENVDIWSVGCIMGELVKG 219
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 90/199 (45%), Gaps = 11/199 (5%)
Query: 444 IGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF 503
+G+G G V++ S + + KF + + Q E+ L RHRNI+ +
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKF---VKVKGTDQVLVKKEISILNIARHRNILHLHES 69
Query: 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563
+++E++ L + + +A +L + ++ + V +AL ++H+ I
Sbjct: 70 FESMEELVMIFEFI--SGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIG 124
Query: 564 HRDISSKNVLLDLENEAHVS--DFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEK 621
H DI +N++ + + +FG A+ LKP N+ L Y APE+ V+
Sbjct: 125 HFDIRPENIIYQTRRSSTIKIIEFGQARQLKP-GDNFRLLFTAPEYYAPEVHQHDVVSTA 183
Query: 622 CDVYSFGVLALEVIKGKHP 640
D++S G L ++ G +P
Sbjct: 184 TDMWSLGTLVYVLLSGINP 202
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 95/231 (41%), Gaps = 30/231 (12%)
Query: 480 QEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTK 539
+ F ++ + H+++V YG C + +V E+++ GSL L + ++ W
Sbjct: 57 ESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW-- 114
Query: 540 RMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEA--------HVSDFGTAKFL 591
++ V K + A+ ++ + ++H ++ +KN+LL E + +SD G + +
Sbjct: 115 KLEVAKQLAWAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV 171
Query: 592 KPDSSNWAELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFXXXXXXX 650
P L +V PE K + D +SFG E+ G D
Sbjct: 172 LPKDI----LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGG---DKPLSALDS 224
Query: 651 XXNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKV 701
L+ + +LP P K + + +C+D P+ RP+ + +
Sbjct: 225 QRKLQFYEDRH---QLPAP------KAAELANLINNCMDYEPDHRPSFRAI 266
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 63/152 (41%), Gaps = 10/152 (6%)
Query: 493 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALS 552
+H NI+ ++ ++V E + G L L K + V+ + +
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELXKGGEL---LDKILRQKFFSEREASAVLFTITKTVE 130
Query: 553 YMHNDCFPPIVHRDISSKNVLLDLEN----EAHVSDFGTAKFLKPDSSNWAELAGTYGYV 608
Y+H +VHRD+ N+L E+ + DFG AK L+ ++ T +V
Sbjct: 131 YLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFV 187
Query: 609 APELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
APE+ CD++S GVL + G P
Sbjct: 188 APEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 436 NDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH 494
+ FD +G G G V + SG A+K ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 495 RNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+VK + ++V EY+ G + L + R + +V Y+
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQ-IVLTFEYL 157
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ +++RD+ +N+L+D + V+DFG AK +K W L GT +APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEALAPEIIL 211
Query: 615 TMKVTEKCDVYSFGVLALEVIKGKHP 640
+ + D ++ GVL E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 92/205 (44%), Gaps = 17/205 (8%)
Query: 444 IGKGGQGSVYKAE--LPSGEIVAVKKFHSPLPSE---MASQQEFLNEVKTLTGIRHRNIV 498
IG+G G V+KA G VA+K+ E +++ +E + ++ L H N+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIRE-VAVLRHLETFEHPNVV 77
Query: 499 KFYGFCSHARHS-----FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSY 553
+ + C+ +R +V+E+++ + + + +++ ++ L +
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQDLTTYL--DKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELA 613
+H+ +VHRD+ +N+L+ + ++DFG A+ + + T Y APE+
Sbjct: 136 LHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-LTSVVVTLWYRAPEVL 191
Query: 614 YTMKVTEKCDVYSFGVLALEVIKGK 638
D++S G + E+ + K
Sbjct: 192 LQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 89/218 (40%), Gaps = 26/218 (11%)
Query: 434 VTNDFDDEHCIGKGGQGSVYKAEL----PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTL 489
+ +D D + G G+ A L S E+VAVK + ++E +N
Sbjct: 14 IMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINH---- 69
Query: 490 TGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVD 549
+RH NIV+F H IV EY G L + N A + + ++
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICN---AGRFSEDEARFFFQQLIS 126
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAH--VSDFGTAK----FLKPDSSNWAELAG 603
+SY H + HRD+ +N LLD + FG +K +P S+ G
Sbjct: 127 GVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST-----VG 178
Query: 604 TYGYVAPELAYTMKVTEK-CDVYSFGVLALEVIKGKHP 640
T Y+APE+ + K DV+S GV ++ G +P
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 106/245 (43%), Gaps = 25/245 (10%)
Query: 444 IGKGGQGSV---YKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
IG G QG V Y A L VA+KK P ++ +++ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIISL 88
Query: 501 YGFCSHAR------HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+ + ++V E ++ +L ++ + + + + ++ ++ + ++
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 142
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ I+HRD+ N+++ + + DFG A+ S T Y APE+
Sbjct: 143 HS---AGIIHRDLKPSNIVVKSDXTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 615 TMKVTEKCDVYSFGVLALEVIKGK--HP-RDFXXXXXXXXXNLEIALNEMLDPRLPTPSH 671
M E D++S G + E+++ K P RD+ L E + PT +
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 258
Query: 672 NVQDK 676
V+++
Sbjct: 259 YVENR 263
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 19/209 (9%)
Query: 443 CIGKGGQGSVYKAELPSG----EIVAVKKFHSPLPSEMASQQEFLN-EVKTLTGIRHRN- 496
+G G G V+ SG ++ A+K + A E E + L IR
Sbjct: 61 VLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPF 120
Query: 497 -IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKG-VVDALSYM 554
+ Y F + + I+ +Y+ G L LS ++ + + G +V AL ++
Sbjct: 121 LVTLHYAFQTETKLHLIL-DYINGGELFTHLSQ----RERFTEHEVQIYVGEIVLALEHL 175
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAK-FLKPDSSNWAELAGTYGYVAPELA 613
H I++RDI +N+LLD ++DFG +K F+ ++ + GT Y+AP++
Sbjct: 176 HK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIV 232
Query: 614 YTMKV--TEKCDVYSFGVLALEVIKGKHP 640
+ D +S GVL E++ G P
Sbjct: 233 RGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 106/245 (43%), Gaps = 25/245 (10%)
Query: 444 IGKGGQGSV---YKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
IG G QG V Y A L VA+KK P ++ +++ + E+ + + H+NI+
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 81
Query: 501 YGFCSHAR------HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+ + ++V E ++ +L ++ + + + + ++ ++ + ++
Sbjct: 82 LNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQMELDHERMSY-----LLYQMLXGIKHL 135
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ I+HRD+ N+++ + + DFG A+ S T Y APE+
Sbjct: 136 HSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVIL 191
Query: 615 TMKVTEKCDVYSFGVLALEVIKGK--HP-RDFXXXXXXXXXNLEIALNEMLDPRLPTPSH 671
M E D++S G + E+++ K P RD+ L E + PT +
Sbjct: 192 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 251
Query: 672 NVQDK 676
V+++
Sbjct: 252 YVENR 256
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 92/204 (45%), Gaps = 22/204 (10%)
Query: 444 IGKGGQGSV---YKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
IG G QG V Y A L VA+KK P ++ +++ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIISL 88
Query: 501 YGFCSHAR------HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+ + ++V E ++ +L ++ + + + + ++ ++ + ++
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQMELDHERMSY-----LLYQMLXGIKHL 142
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ I+HRD+ N+++ + + DFG A+ S T Y APE+
Sbjct: 143 HSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 615 TMKVTEKCDVYSFGVLALEVIKGK 638
M E D++S G + E+++ K
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 13/181 (7%)
Query: 465 VKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAM 524
+KK + S+++ EV L I+H N++ + + ++ E + G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 525 ILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLEN----EA 580
L A + L + +K +++ + Y+H+ I H D+ +N++L N
Sbjct: 104 FL---AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 581 HVSDFGTAKFLKPDSSN-WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKH 639
+ DFG A K D N + + GT +VAPE+ + + D++S GV+ ++ G
Sbjct: 158 KIIDFGLAH--KIDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 640 P 640
P
Sbjct: 216 P 216
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 106/245 (43%), Gaps = 25/245 (10%)
Query: 444 IGKGGQGSV---YKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
IG G QG V Y A L VA+KK P ++ +++ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 88
Query: 501 YGFCSHAR------HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+ + ++V E ++ +L ++ + + + + ++ ++ + ++
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQMELDHERMSY-----LLYQMLXGIKHL 142
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ I+HRD+ N+++ + + DFG A+ S T Y APE+
Sbjct: 143 HSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 615 TMKVTEKCDVYSFGVLALEVIKGK--HP-RDFXXXXXXXXXNLEIALNEMLDPRLPTPSH 671
M E D++S G + E+++ K P RD+ L E + PT +
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 258
Query: 672 NVQDK 676
V+++
Sbjct: 259 YVENR 263
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 92/205 (44%), Gaps = 17/205 (8%)
Query: 444 IGKGGQGSVYKAE--LPSGEIVAVKKFHSPLPSE---MASQQEFLNEVKTLTGIRHRNIV 498
IG+G G V+KA G VA+K+ E +++ +E + ++ L H N+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIRE-VAVLRHLETFEHPNVV 77
Query: 499 KFYGFCSHARHS-----FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSY 553
+ + C+ +R +V+E+++ + + + +++ ++ L +
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQDLTTYL--DKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELA 613
+H+ +VHRD+ +N+L+ + ++DFG A+ + + T Y APE+
Sbjct: 136 LHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-LTSVVVTLWYRAPEVL 191
Query: 614 YTMKVTEKCDVYSFGVLALEVIKGK 638
D++S G + E+ + K
Sbjct: 192 LQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 92/205 (44%), Gaps = 17/205 (8%)
Query: 444 IGKGGQGSVYKAE--LPSGEIVAVKKFHSPLPSE---MASQQEFLNEVKTLTGIRHRNIV 498
IG+G G V+KA G VA+K+ E +++ +E + ++ L H N+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIRE-VAVLRHLETFEHPNVV 77
Query: 499 KFYGFCSHARHS-----FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSY 553
+ + C+ +R +V+E+++ + + + +++ ++ L +
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQDLTTYL--DKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 554 MHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELA 613
+H+ +VHRD+ +N+L+ + ++DFG A+ + + T Y APE+
Sbjct: 136 LHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-LTSVVVTLWYRAPEVL 191
Query: 614 YTMKVTEKCDVYSFGVLALEVIKGK 638
D++S G + E+ + K
Sbjct: 192 LQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 87/214 (40%), Gaps = 18/214 (8%)
Query: 434 VTNDFDDEHCIGKGGQGSVYKAEL----PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTL 489
+ +D D + G G+ A L S E+VAVK + ++E +N
Sbjct: 14 IMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINH---- 69
Query: 490 TGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVD 549
+RH NIV+F H IV EY G L + N A + + ++
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICN---AGRFSEDEARFFFQQLIS 126
Query: 550 ALSYMHNDCFPPIVHRDISSKNVLLDLENEAH--VSDFGTAKFLKPDSSNWAELAGTYGY 607
+SY H + HRD+ +N LLD + FG +K S + GT Y
Sbjct: 127 GVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKS-SVLHSQPKDTVGTPAY 182
Query: 608 VAPELAYTMKVTEK-CDVYSFGVLALEVIKGKHP 640
+APE+ + K DV+S GV ++ G +P
Sbjct: 183 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 31/206 (15%)
Query: 434 VTNDFDDEHCIGKGGQGSVYKA--ELPSGEIVAVKKF-HS---PLPSEMASQQEFLNEVK 487
V ++ + CI GG G +Y A +G V +K HS + ++++FL EV
Sbjct: 78 VAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVV 137
Query: 488 TLTGIRHRNIVKFYGFCSHA-RH----SFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMN 542
H +IV+ + F H RH +IV EY+ SL + + L + +
Sbjct: 138 ------HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSL-----KRSKGQKLPVAEAIA 186
Query: 543 VIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELA 602
+ ++ ALSY+H+ +V+ D+ +N++L E + + D G + +++ L
Sbjct: 187 YLLEILPALSYLHSIG---LVYNDLKPENIML-TEEQLKLIDLGAVSRI----NSFGYLY 238
Query: 603 GTYGYVAPELAYTMKVTEKCDVYSFG 628
GT G+ APE+ T T D+Y+ G
Sbjct: 239 GTPGFQAPEIVRTGP-TVATDIYTVG 263
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 91/201 (45%), Gaps = 22/201 (10%)
Query: 444 IGKGGQGSV---YKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
IG G QG V Y A L VA+KK P ++ +++ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 88
Query: 501 YGFCSHAR------HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+ + +IV E ++ +L ++ + + + + ++ ++ + ++
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 142
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ I+HRD+ N+++ + + DFG A+ E+ Y Y APE+
Sbjct: 143 HS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY-YRAPEVIL 198
Query: 615 TMKVTEKCDVYSFGVLALEVI 635
M E D++S G + E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 106/245 (43%), Gaps = 25/245 (10%)
Query: 444 IGKGGQGSV---YKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
IG G QG V Y A L VA+KK P ++ +++ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIISL 88
Query: 501 YGFCSHAR------HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+ + ++V E ++ +L ++ + + + + ++ ++ + ++
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQMELDHERMSY-----LLYQMLCGIKHL 142
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ I+HRD+ N+++ + + DFG A+ S T Y APE+
Sbjct: 143 HS---AGIIHRDLKPSNIVVKSDXTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 615 TMKVTEKCDVYSFGVLALEVIKGK--HP-RDFXXXXXXXXXNLEIALNEMLDPRLPTPSH 671
M E D++S G + E+++ K P RD+ L E + PT +
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 258
Query: 672 NVQDK 676
V+++
Sbjct: 259 YVENR 263
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 13/181 (7%)
Query: 465 VKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAM 524
+KK + S+++ EV L I+H N++ + + ++ E + G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 525 ILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLEN----EA 580
L A + L + +K +++ + Y+H+ I H D+ +N++L N
Sbjct: 104 FL---AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 581 HVSDFGTAKFLKPDSSN-WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKH 639
+ DFG A K D N + + GT +VAPE+ + + D++S GV+ ++ G
Sbjct: 158 KIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 640 P 640
P
Sbjct: 216 P 216
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 562 IVHRDISSKNVLL-DLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY-TMKVT 619
+ HRDI NVL+ + + + DFG+AK L P N A + Y Y APEL + T
Sbjct: 152 VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRY-YRAPELIFGNQHYT 210
Query: 620 EKCDVYSFGVLALEVIKGK 638
D++S G + E++ G+
Sbjct: 211 TAVDIWSVGCIFAEMMLGE 229
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 106/245 (43%), Gaps = 25/245 (10%)
Query: 444 IGKGGQGSV---YKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
IG G QG V Y A L VA+KK P ++ +++ + E+ + + H+NI+
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 82
Query: 501 YGFCSHAR------HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+ + ++V E ++ +L ++ + + + + ++ ++ + ++
Sbjct: 83 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 136
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ I+HRD+ N+++ + + DFG A+ S T Y APE+
Sbjct: 137 HS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVIL 192
Query: 615 TMKVTEKCDVYSFGVLALEVIKGK--HP-RDFXXXXXXXXXNLEIALNEMLDPRLPTPSH 671
M E D++S G + E+++ K P RD+ L E + PT +
Sbjct: 193 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 252
Query: 672 NVQDK 676
V+++
Sbjct: 253 YVENR 257
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 13/181 (7%)
Query: 465 VKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAM 524
+KK + S+++ EV L I+H N++ + + ++ E + G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 525 ILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLEN----EA 580
L A + L + +K +++ + Y+H+ I H D+ +N++L N
Sbjct: 104 FL---AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 581 HVSDFGTAKFLKPDSSN-WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKH 639
+ DFG A K D N + + GT +VAPE+ + + D++S GV+ ++ G
Sbjct: 158 KIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 640 P 640
P
Sbjct: 216 P 216
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 106/245 (43%), Gaps = 25/245 (10%)
Query: 444 IGKGGQGSV---YKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
IG G QG V Y A L VA+KK P ++ +++ + E+ + + H+NI+
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 81
Query: 501 YGFCSHAR------HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+ + ++V E ++ +L ++ + + + + ++ ++ + ++
Sbjct: 82 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 135
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ I+HRD+ N+++ + + DFG A+ S T Y APE+
Sbjct: 136 HS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVIL 191
Query: 615 TMKVTEKCDVYSFGVLALEVIKGK--HP-RDFXXXXXXXXXNLEIALNEMLDPRLPTPSH 671
M E D++S G + E+++ K P RD+ L E + PT +
Sbjct: 192 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 251
Query: 672 NVQDK 676
V+++
Sbjct: 252 YVENR 256
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDL-ENEAHVSDFGTAKFLKPDSSNWAELAGTY 605
V++A+ + HN C ++HRDI +N+L+DL E + DFG+ LK + + + GT
Sbjct: 146 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 200
Query: 606 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y PE + Y V+S G+L +++ G P
Sbjct: 201 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 236
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDL-ENEAHVSDFGTAKFLKPDSSNWAELAGTY 605
V++A+ + HN C ++HRDI +N+L+DL E + DFG+ LK + + + GT
Sbjct: 166 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 220
Query: 606 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y PE + Y V+S G+L +++ G P
Sbjct: 221 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 106/245 (43%), Gaps = 25/245 (10%)
Query: 444 IGKGGQGSV---YKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
IG G QG V Y A L VA+KK P ++ +++ + E+ + + H+NI+
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 82
Query: 501 YGFCSHAR------HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+ + ++V E ++ +L ++ + + + + ++ ++ + ++
Sbjct: 83 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 136
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ I+HRD+ N+++ + + DFG A+ S T Y APE+
Sbjct: 137 HS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVIL 192
Query: 615 TMKVTEKCDVYSFGVLALEVIKGK--HP-RDFXXXXXXXXXNLEIALNEMLDPRLPTPSH 671
M E D++S G + E+++ K P RD+ L E + PT +
Sbjct: 193 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 252
Query: 672 NVQDK 676
V+++
Sbjct: 253 YVENR 257
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 13/181 (7%)
Query: 465 VKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAM 524
+KK + S+++ EV L I+H N++ + + ++ E + G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 525 ILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLEN----EA 580
L A + L + +K +++ + Y+H+ I H D+ +N++L N
Sbjct: 104 FL---AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 581 HVSDFGTAKFLKPDSSN-WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKH 639
+ DFG A K D N + + GT +VAPE+ + + D++S GV+ ++ G
Sbjct: 158 KIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 640 P 640
P
Sbjct: 216 P 216
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 13/181 (7%)
Query: 465 VKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAM 524
+KK + S+++ EV L I+H N++ + + ++ E + G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 525 ILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLEN----EA 580
L A + L + +K +++ + Y+H+ I H D+ +N++L N
Sbjct: 104 FL---AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 581 HVSDFGTAKFLKPDSSN-WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKH 639
+ DFG A K D N + + GT +VAPE+ + + D++S GV+ ++ G
Sbjct: 158 KIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 640 P 640
P
Sbjct: 216 P 216
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDL-ENEAHVSDFGTAKFLKPDSSNWAELAGTY 605
V++A+ + HN C ++HRDI +N+L+DL E + DFG+ LK + + + GT
Sbjct: 171 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 225
Query: 606 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y PE + Y V+S G+L +++ G P
Sbjct: 226 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 261
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDL-ENEAHVSDFGTAKFLKPDSSNWAELAGTY 605
V++A+ + HN C ++HRDI +N+L+DL E + DFG+ LK + + + GT
Sbjct: 124 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 178
Query: 606 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y PE + Y V+S G+L +++ G P
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDL-ENEAHVSDFGTAKFLKPDSSNWAELAGTY 605
V++A+ + HN ++HRDI +N+L+DL E + DFG+ LK + + + GT
Sbjct: 119 VLEAVRHCHNXG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 173
Query: 606 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y PE + Y V+S G+L +++ G P
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 106/245 (43%), Gaps = 25/245 (10%)
Query: 444 IGKGGQGSV---YKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
IG G QG V Y A L VA+KK P ++ +++ + E+ + + H+NI+
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 126
Query: 501 YGFCSHAR------HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+ + ++V E ++ +L ++ + + + + ++ ++ + ++
Sbjct: 127 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 180
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ I+HRD+ N+++ + + DFG A+ S T Y APE+
Sbjct: 181 HS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVIL 236
Query: 615 TMKVTEKCDVYSFGVLALEVIKGK--HP-RDFXXXXXXXXXNLEIALNEMLDPRLPTPSH 671
M E D++S G + E+++ K P RD+ L E + PT +
Sbjct: 237 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 296
Query: 672 NVQDK 676
V+++
Sbjct: 297 YVENR 301
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDL-ENEAHVSDFGTAKFLKPDSSNWAELAGTY 605
V++A+ + HN C ++HRDI +N+L+DL E + DFG+ LK + + + GT
Sbjct: 152 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 206
Query: 606 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y PE + Y V+S G+L +++ G P
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDL-ENEAHVSDFGTAKFLKPDSSNWAELAGTY 605
V++A+ + HN C ++HRDI +N+L+DL E + DFG+ LK + + + GT
Sbjct: 152 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 206
Query: 606 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y PE + Y V+S G+L +++ G P
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDL-ENEAHVSDFGTAKFLKPDSSNWAELAGTY 605
V++A+ + HN C ++HRDI +N+L+DL E + DFG+ LK + + + GT
Sbjct: 166 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 220
Query: 606 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y PE + Y V+S G+L +++ G P
Sbjct: 221 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDL-ENEAHVSDFGTAKFLKPDSSNWAELAGTY 605
V++A+ + HN C ++HRDI +N+L+DL E + DFG+ LK + + + GT
Sbjct: 151 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 205
Query: 606 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y PE + Y V+S G+L +++ G P
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDL-ENEAHVSDFGTAKFLKPDSSNWAELAGTY 605
V++A+ + HN C ++HRDI +N+L+DL E + DFG+ LK + + + GT
Sbjct: 119 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 173
Query: 606 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y PE + Y V+S G+L +++ G P
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDL-ENEAHVSDFGTAKFLKPDSSNWAELAGTY 605
V++A+ + HN C ++HRDI +N+L+DL E + DFG+ LK + + + GT
Sbjct: 119 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 173
Query: 606 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y PE + Y V+S G+L +++ G P
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDL-ENEAHVSDFGTAKFLKPDSSNWAELAGTY 605
V++A+ + HN C ++HRDI +N+L+DL E + DFG+ LK + + + GT
Sbjct: 151 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 205
Query: 606 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y PE + Y V+S G+L +++ G P
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 106/245 (43%), Gaps = 25/245 (10%)
Query: 444 IGKGGQGSV---YKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
IG G QG V Y A L VA+KK P ++ +++ + E+ + + H+NI+
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 89
Query: 501 YGFCSHAR------HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+ + ++V E ++ +L ++ + + + + ++ ++ + ++
Sbjct: 90 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 143
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ I+HRD+ N+++ + + DFG A+ S T Y APE+
Sbjct: 144 HS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVIL 199
Query: 615 TMKVTEKCDVYSFGVLALEVIKGK--HP-RDFXXXXXXXXXNLEIALNEMLDPRLPTPSH 671
M E D++S G + E+++ K P RD+ L E + PT +
Sbjct: 200 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 259
Query: 672 NVQDK 676
V+++
Sbjct: 260 YVENR 264
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDL-ENEAHVSDFGTAKFLKPDSSNWAELAGTY 605
V++A+ + HN C ++HRDI +N+L+DL E + DFG+ LK + + + GT
Sbjct: 152 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 206
Query: 606 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y PE + Y V+S G+L +++ G P
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDL-ENEAHVSDFGTAKFLKPDSSNWAELAGTY 605
V++A+ + HN C ++HRDI +N+L+DL E + DFG+ LK + + + GT
Sbjct: 151 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 205
Query: 606 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y PE + Y V+S G+L +++ G P
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDL-ENEAHVSDFGTAKFLKPDSSNWAELAGTY 605
V++A+ + HN C ++HRDI +N+L+DL E + DFG+ LK + + + GT
Sbjct: 158 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 212
Query: 606 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y PE + Y V+S G+L +++ G P
Sbjct: 213 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 248
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDL-ENEAHVSDFGTAKFLKPDSSNWAELAGTY 605
V++A+ + HN C ++HRDI +N+L+DL E + DFG+ LK + + + GT
Sbjct: 151 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 205
Query: 606 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y PE + Y V+S G+L +++ G P
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDL-ENEAHVSDFGTAKFLKPDSSNWAELAGTY 605
V++A+ + HN C ++HRDI +N+L+DL E + DFG+ LK + + + GT
Sbjct: 166 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 220
Query: 606 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y PE + Y V+S G+L +++ G P
Sbjct: 221 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDL-ENEAHVSDFGTAKFLKPDSSNWAELAGTY 605
V++A+ + HN C ++HRDI +N+L+DL E + DFG+ LK + + + GT
Sbjct: 152 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 206
Query: 606 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y PE + Y V+S G+L +++ G P
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 106/245 (43%), Gaps = 25/245 (10%)
Query: 444 IGKGGQGSV---YKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
IG G QG V Y A L VA+KK P ++ +++ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 88
Query: 501 YGFCSHAR------HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+ + ++V E ++ +L ++ + + + + ++ ++ + ++
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 142
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ I+HRD+ N+++ + + DFG A+ S T Y APE+
Sbjct: 143 HS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 615 TMKVTEKCDVYSFGVLALEVIKGK--HP-RDFXXXXXXXXXNLEIALNEMLDPRLPTPSH 671
M E D++S G + E+++ K P RD+ L E + PT +
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 258
Query: 672 NVQDK 676
V+++
Sbjct: 259 YVENR 263
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDL-ENEAHVSDFGTAKFLKPDSSNWAELAGTY 605
V++A+ + HN C ++HRDI +N+L+DL E + DFG+ LK + + + GT
Sbjct: 139 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 193
Query: 606 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y PE + Y V+S G+L +++ G P
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDL-ENEAHVSDFGTAKFLKPDSSNWAELAGTY 605
V++A+ + HN C ++HRDI +N+L+DL E + DFG+ LK + + + GT
Sbjct: 124 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 178
Query: 606 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y PE + Y V+S G+L +++ G P
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 106/245 (43%), Gaps = 25/245 (10%)
Query: 444 IGKGGQGSV---YKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
IG G QG V Y A L VA+KK P ++ +++ + E+ + + H+NI+
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 126
Query: 501 YGFCSHAR------HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+ + ++V E ++ +L ++ + + + + ++ ++ + ++
Sbjct: 127 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 180
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ I+HRD+ N+++ + + DFG A+ S T Y APE+
Sbjct: 181 HS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVIL 236
Query: 615 TMKVTEKCDVYSFGVLALEVIKGK--HP-RDFXXXXXXXXXNLEIALNEMLDPRLPTPSH 671
M E D++S G + E+++ K P RD+ L E + PT +
Sbjct: 237 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 296
Query: 672 NVQDK 676
V+++
Sbjct: 297 YVENR 301
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDL-ENEAHVSDFGTAKFLKPDSSNWAELAGTY 605
V++A+ + HN C ++HRDI +N+L+DL E + DFG+ LK + + + GT
Sbjct: 123 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 177
Query: 606 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y PE + Y V+S G+L +++ G P
Sbjct: 178 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 213
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDL-ENEAHVSDFGTAKFLKPDSSNWAELAGTY 605
V++A+ + HN C ++HRDI +N+L+DL E + DFG+ LK + + + GT
Sbjct: 122 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 176
Query: 606 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y PE + Y V+S G+L +++ G P
Sbjct: 177 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 212
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDL-ENEAHVSDFGTAKFLKPDSSNWAELAGTY 605
V++A+ + HN C ++HRDI +N+L+DL E + DFG+ LK + + + GT
Sbjct: 123 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 177
Query: 606 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y PE + Y V+S G+L +++ G P
Sbjct: 178 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 213
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDL-ENEAHVSDFGTAKFLKPDSSNWAELAGTY 605
V++A+ + HN C ++HRDI +N+L+DL E + DFG+ LK + + + GT
Sbjct: 124 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 178
Query: 606 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y PE + Y V+S G+L +++ G P
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 106/245 (43%), Gaps = 25/245 (10%)
Query: 444 IGKGGQGSV---YKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
IG G QG V Y A L VA+KK P ++ +++ + E+ + + H+NI+
Sbjct: 31 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 87
Query: 501 YGFCSHAR------HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+ + ++V E ++ +L ++ + + + + ++ ++ + ++
Sbjct: 88 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 141
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ I+HRD+ N+++ + + DFG A+ S T Y APE+
Sbjct: 142 HS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVIL 197
Query: 615 TMKVTEKCDVYSFGVLALEVIKGK--HP-RDFXXXXXXXXXNLEIALNEMLDPRLPTPSH 671
M E D++S G + E+++ K P RD+ L E + PT +
Sbjct: 198 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 257
Query: 672 NVQDK 676
V+++
Sbjct: 258 YVENR 262
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 13/181 (7%)
Query: 465 VKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAM 524
+KK + S+++ EV L I+H N++ + + ++ E + G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 525 ILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLEN----EA 580
L A + L + +K +++ + Y+H+ I H D+ +N++L N
Sbjct: 104 FL---AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 581 HVSDFGTAKFLKPDSSN-WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKH 639
+ DFG A K D N + + GT +VAPE+ + + D++S GV+ ++ G
Sbjct: 158 KIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 640 P 640
P
Sbjct: 216 P 216
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 237 SLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICN-MQSLEKL 295
+L L L YL L+ NQ +KL +L EL L N L + +P + + + +L L
Sbjct: 80 ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQL-QSLPDGVFDKLTNLTYL 138
Query: 296 NLSHNNLSGFIPSCFEELHGLSYIDISYNELHGSIP 331
NL+HN L F++L L+ +D+SYN+L S+P
Sbjct: 139 NLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ-SLP 173
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 241 LVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICN-MQSLEKLNLSH 299
L L YLNL++NQ +KL +L+ELDLS+N L + +P + + + L+ L L
Sbjct: 132 LTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQL-QSLPEGVFDKLTQLKDLRLYQ 190
Query: 300 NNLSGFIPSCFEELHGLSYIDISYNELHGSIP 331
N L F+ L L YI + N + P
Sbjct: 191 NQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 63/134 (47%), Gaps = 5/134 (3%)
Query: 2 LSNLAFLYLYNNSFSGSIPSEI-GRLKSLSDLELSGNKLCGSIPHSL-GNLTQITFLTLF 59
L+NL +L L N S+P+ + +L +L +L L N+L S+P + LT +T+L L
Sbjct: 84 LTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQL-QSLPDGVFDKLTNLTYLNLA 141
Query: 60 DNALSGAIPKEYGNLVKLTLLTLENNQLRG-PIPNLRNLTSLVRVRLNQNHLTGNISESF 118
N L + L LT L L NQL+ P LT L +RL QN L F
Sbjct: 142 HNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVF 201
Query: 119 GIHPNLAFIDLSHN 132
+L +I L N
Sbjct: 202 DRLTSLQYIWLHDN 215
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Query: 2 LSNLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSL-GNLTQITFLTLFD 60
L+NL +L L +N +L +L++L+LS N+L S+P + LTQ+ L L+
Sbjct: 132 LTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQL-QSLPEGVFDKLTQLKDLRLYQ 190
Query: 61 NALSGAIPKEYGNLVKLTLLTLENNQLRGPIPNLRNLTSLV 101
N L + L L + L +N P +R L+ +
Sbjct: 191 NQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGIRYLSEWI 231
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 241 LVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICN-MQSLEKLNLSH 299
L L L L NQ +KL +L+ L+L+HN L + +P + + + +L +L+LS+
Sbjct: 108 LTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQL-QSLPKGVFDKLTNLTELDLSY 166
Query: 300 NNLSGFIPSCFEELHGLSYIDISYNELHGSIPNSTAFR 337
N L F++L L + + N+L S+P+ R
Sbjct: 167 NQLQSLPEGVFDKLTQLKDLRLYQNQLK-SVPDGVFDR 203
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 55/114 (48%), Gaps = 11/114 (9%)
Query: 2 LSNLAFLYLYNNSFSGSIPSEIGRLKSLSDLE---LSGNKLCGSIPHSL-GNLTQITFLT 57
L N+ +L L N +I LK L++L L+GN+L S+P+ + LT + L
Sbjct: 62 LPNVRYLALGGNKLH-----DISALKELTNLTYLILTGNQL-QSLPNGVFDKLTNLKELV 115
Query: 58 LFDNALSGAIPKEYGNLVKLTLLTLENNQLRG-PIPNLRNLTSLVRVRLNQNHL 110
L +N L + L LT L L +NQL+ P LT+L + L+ N L
Sbjct: 116 LVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQL 169
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 106/245 (43%), Gaps = 25/245 (10%)
Query: 444 IGKGGQGSV---YKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
IG G QG V Y A L VA+KK P ++ +++ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 88
Query: 501 YGFCSHAR------HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+ + ++V E ++ +L ++ + + + + ++ ++ + ++
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 142
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ I+HRD+ N+++ + + DFG A+ S T Y APE+
Sbjct: 143 HS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 615 TMKVTEKCDVYSFGVLALEVIKGK--HP-RDFXXXXXXXXXNLEIALNEMLDPRLPTPSH 671
M E D++S G + E+++ K P RD+ L E + PT +
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 258
Query: 672 NVQDK 676
V+++
Sbjct: 259 YVENR 263
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDL-ENEAHVSDFGTAKFLKPDSSNWAELAGTY 605
V++A+ + HN C ++HRDI +N+L+DL E + DFG+ LK + + + GT
Sbjct: 139 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 193
Query: 606 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y PE + Y V+S G+L +++ G P
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 13/181 (7%)
Query: 465 VKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAM 524
+KK + S+++ EV L I+H N++ + + ++ E + G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 525 ILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLEN----EA 580
L A + L + +K +++ + Y+H+ I H D+ +N++L N
Sbjct: 104 FL---AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 581 HVSDFGTAKFLKPDSSN-WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKH 639
+ DFG A K D N + + GT +VAPE+ + + D++S GV+ ++ G
Sbjct: 158 KIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 640 P 640
P
Sbjct: 216 P 216
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDL-ENEAHVSDFGTAKFLKPDSSNWAELAGTY 605
V++A+ + HN C ++HRDI +N+L+DL E + DFG+ LK + + + GT
Sbjct: 139 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 193
Query: 606 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y PE + Y V+S G+L +++ G P
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 106/245 (43%), Gaps = 25/245 (10%)
Query: 444 IGKGGQGSV---YKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
IG G QG V Y A L VA+KK P ++ +++ + E+ + + H+NI+
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 89
Query: 501 YGFCSHAR------HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+ + ++V E ++ +L ++ + + + + ++ ++ + ++
Sbjct: 90 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 143
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ I+HRD+ N+++ + + DFG A+ S T Y APE+
Sbjct: 144 HS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVIL 199
Query: 615 TMKVTEKCDVYSFGVLALEVIKGK--HP-RDFXXXXXXXXXNLEIALNEMLDPRLPTPSH 671
M E D++S G + E+++ K P RD+ L E + PT +
Sbjct: 200 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 259
Query: 672 NVQDK 676
V+++
Sbjct: 260 YVENR 264
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDL-ENEAHVSDFGTAKFLKPDSSNWAELAGTY 605
V++A+ + HN C ++HRDI +N+L+DL E + DFG+ LK + + + GT
Sbjct: 138 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 192
Query: 606 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y PE + Y V+S G+L +++ G P
Sbjct: 193 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 228
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 13/181 (7%)
Query: 465 VKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAM 524
+KK + S+++ EV L I+H N++ + + ++ E + G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 525 ILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLEN----EA 580
L A + L + +K +++ + Y+H+ I H D+ +N++L N
Sbjct: 104 FL---AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 581 HVSDFGTAKFLKPDSSN-WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKH 639
+ DFG A K D N + + GT +VAPE+ + + D++S GV+ ++ G
Sbjct: 158 KIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 640 P 640
P
Sbjct: 216 P 216
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 547 VVDALSYMHNDCFPPIVHRDISSKNVLLDL-ENEAHVSDFGTAKFLKPDSSNWAELAGTY 605
V++A+ + HN C ++HRDI +N+L+DL E + DFG+ LK + + + GT
Sbjct: 138 VLEAVRHCHN-C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 192
Query: 606 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 640
Y PE + Y V+S G+L +++ G P
Sbjct: 193 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 228
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 13/181 (7%)
Query: 465 VKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAM 524
+KK + S+++ EV L I+H N++ + + ++ E + G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 525 ILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLEN----EA 580
L A + L + +K +++ + Y+H+ I H D+ +N++L N
Sbjct: 104 FL---AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 581 HVSDFGTAKFLKPDSSN-WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKH 639
+ DFG A K D N + + GT +VAPE+ + + D++S GV+ ++ G
Sbjct: 158 KIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 640 P 640
P
Sbjct: 216 P 216
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 13/181 (7%)
Query: 465 VKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAM 524
+KK + S+++ EV L I+H N++ + + ++ E + G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 525 ILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLEN----EA 580
L A + L + +K +++ + Y+H+ I H D+ +N++L N
Sbjct: 104 FL---AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 581 HVSDFGTAKFLKPDSSN-WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKH 639
+ DFG A K D N + + GT +VAPE+ + + D++S GV+ ++ G
Sbjct: 158 KIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 640 P 640
P
Sbjct: 216 P 216
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 13/181 (7%)
Query: 465 VKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAM 524
+KK + S+++ EV L I+H N++ + + ++ E + G L
Sbjct: 43 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 102
Query: 525 ILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLEN----EA 580
L A + L + +K +++ + Y+H+ I H D+ +N++L N
Sbjct: 103 FL---AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRI 156
Query: 581 HVSDFGTAKFLKPDSSN-WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKH 639
+ DFG A K D N + + GT +VAPE+ + + D++S GV+ ++ G
Sbjct: 157 KIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 214
Query: 640 P 640
P
Sbjct: 215 P 215
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 107/223 (47%), Gaps = 29/223 (13%)
Query: 433 RVTNDFDDEHC-IGKGGQGSVY---KAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKT 488
RV + F+ E C +G+G G VY + + + A+K+ S A + E+
Sbjct: 17 RVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACR-----EIAL 71
Query: 489 LTGIRHRNIVKFYG-FCSHA-RHSFIVYEYLEMGSLAMI---LSNDAAAKDLGWTKRM-- 541
L ++H N++ F SHA R +++++Y E +I ++ A K + + M
Sbjct: 72 LRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVK 131
Query: 542 NVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLE----NEAHVSDFGTAKF----LKP 593
+++ ++D + Y+H + ++HRD+ N+L+ E ++D G A+ LKP
Sbjct: 132 SLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP 188
Query: 594 DSSNWAELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVI 635
++ + T+ Y APEL + T+ D+++ G + E++
Sbjct: 189 -LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 230
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 13/181 (7%)
Query: 465 VKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAM 524
+KK + S+++ EV L I+H N++ + + ++ E + G L
Sbjct: 43 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 102
Query: 525 ILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLEN----EA 580
L A + L + +K +++ + Y+H+ I H D+ +N++L N
Sbjct: 103 FL---AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRI 156
Query: 581 HVSDFGTAKFLKPDSSN-WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKH 639
+ DFG A K D N + + GT +VAPE+ + + D++S GV+ ++ G
Sbjct: 157 KIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 214
Query: 640 P 640
P
Sbjct: 215 P 215
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 92/201 (45%), Gaps = 18/201 (8%)
Query: 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYG 502
IG G QG V A + G VAVKK P ++ +++ + E+ L + H+NI+
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAY-RELVLLKCVNHKNIISLLN 90
Query: 503 FCSHAR------HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHN 556
+ + ++V E ++ +L ++ + + + + ++ ++ + ++H+
Sbjct: 91 VFTPQKTLEEFQDVYLVMELMD-ANLCQVIHMELDHERMSY-----LLYQMLCGIKHLHS 144
Query: 557 DCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTM 616
I+HRD+ N+++ + + DFG A+ + + Y Y APE+ M
Sbjct: 145 ---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRY-YRAPEVILGM 200
Query: 617 KVTEKCDVYSFGVLALEVIKG 637
D++S G + E++KG
Sbjct: 201 GYAANVDIWSVGCIMGELVKG 221
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 511 FIVYEYLEMGSLAMILSNDAAAKDLGWTKR--MNVIKGVVDALSYMHNDCFPPIVHRDIS 568
IV E L+ G L S D +T+R ++K + +A+ Y+H+ I HRD+
Sbjct: 89 LIVMECLDGGEL---FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVK 142
Query: 569 SKNVLLDLENEAHV---SDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVY 625
+N+L + + +DFG AK +S E T YVAPE+ K + CD++
Sbjct: 143 PENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTEPCYTPYYVAPEVLGPEKYDKSCDMW 201
Query: 626 SFGVLALEVIKGKHP 640
S GV+ ++ G P
Sbjct: 202 SLGVIMYILLCGYPP 216
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 91/201 (45%), Gaps = 22/201 (10%)
Query: 444 IGKGGQGSV---YKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKF 500
IG G QG V Y A L VA+KK P ++ +++ + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 88
Query: 501 YGFCSHAR------HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYM 554
+ + +IV E ++ +L ++ + + + + ++ ++ + ++
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELDHERMSY-----LLYQMLCGIKHL 142
Query: 555 HNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614
H+ I+HRD+ N+++ + + DFG A+ E+ Y Y APE+
Sbjct: 143 HS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY-YRAPEVIL 198
Query: 615 TMKVTEKCDVYSFGVLALEVI 635
M E D++S G + E++
Sbjct: 199 GMGYKENVDLWSVGCIMGEMV 219
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 107/250 (42%), Gaps = 51/250 (20%)
Query: 427 VYEEIIRVTNDFDDEHCIGKGGQGSVY--KAELPSG--EIVAVKKF-HSPLPSEMASQQE 481
+YE + +++N F E IG+G SVY A+L G E +A+K + P +A+
Sbjct: 12 LYEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAA--- 68
Query: 482 FLNEVKTLTGIRHRNIVKFYGFCSHAR-HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKR 540
E++ LT ++ V +C H I YLE S IL++ L + +
Sbjct: 69 ---ELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNS------LSFQEV 119
Query: 541 MNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAH-VSDFGTA----------- 588
+ + AL +H IVHRD+ N L + + + + DFG A
Sbjct: 120 REYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELL 176
Query: 589 KFLKPDSSN-----------------WAELAGTYGYVAPE-LAYTMKVTEKCDVYSFGVL 630
KF++ ++ A AGT G+ APE L T D++S GV+
Sbjct: 177 KFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVI 236
Query: 631 ALEVIKGKHP 640
L ++ G++P
Sbjct: 237 FLSLLSGRYP 246
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 12/135 (8%)
Query: 511 FIVYEYLEMGSLAMILSNDAAAKDLGWTKR--MNVIKGVVDALSYMHNDCFPPIVHRDIS 568
IV E L+ G L S D +T+R ++K + +A+ Y+H+ I HRD+
Sbjct: 105 LIVMECLDGGEL---FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVK 158
Query: 569 SKNVLLDLENEAHV---SDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVY 625
+N+L + + +DFG AK +S Y YVAPE+ K + CD++
Sbjct: 159 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMW 217
Query: 626 SFGVLALEVIKGKHP 640
S GV+ ++ G P
Sbjct: 218 SLGVIMYILLCGYPP 232
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 12/135 (8%)
Query: 511 FIVYEYLEMGSLAMILSNDAAAKDLGWTKR--MNVIKGVVDALSYMHNDCFPPIVHRDIS 568
IV E L+ G L S D +T+R ++K + +A+ Y+H+ I HRD+
Sbjct: 97 LIVMECLDGGEL---FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVK 150
Query: 569 SKNVLLDLENEAHV---SDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVY 625
+N+L + + +DFG AK +S Y YVAPE+ K + CD++
Sbjct: 151 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMW 209
Query: 626 SFGVLALEVIKGKHP 640
S GV+ ++ G P
Sbjct: 210 SLGVIMYILLCGYPP 224
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 13/181 (7%)
Query: 465 VKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEMGSLAM 524
+KK + S+++ EV L I+H N++ + + ++ E + G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 525 ILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLEN----EA 580
L A + L + +K +++ + Y+H+ I H D+ +N++L N
Sbjct: 104 FL---AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 581 HVSDFGTAKFLKPDSSN-WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKH 639
+ DFG A K D N + + GT +VAPE+ + + D++S GV+ ++ G
Sbjct: 158 KIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 640 P 640
P
Sbjct: 216 P 216
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,257,274
Number of Sequences: 62578
Number of extensions: 774213
Number of successful extensions: 4651
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 721
Number of HSP's successfully gapped in prelim test: 444
Number of HSP's that attempted gapping in prelim test: 1910
Number of HSP's gapped (non-prelim): 1582
length of query: 707
length of database: 14,973,337
effective HSP length: 106
effective length of query: 601
effective length of database: 8,340,069
effective search space: 5012381469
effective search space used: 5012381469
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)