Query 038671
Match_columns 707
No_of_seqs 554 out of 5703
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 23:32:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038671.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038671hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3omv_A RAF proto-oncogene seri 100.0 1.7E-52 5.8E-57 420.3 22.4 257 435-706 35-296 (307)
2 4b9d_A Serine/threonine-protei 100.0 4.3E-53 1.5E-57 430.4 17.7 252 436-703 24-276 (350)
3 4asz_A BDNF/NT-3 growth factor 100.0 1.1E-52 3.8E-57 422.1 19.1 253 436-706 13-285 (299)
4 4gt4_A Tyrosine-protein kinase 100.0 2.4E-52 8.2E-57 421.6 21.3 254 436-706 26-302 (308)
5 4aw0_A HPDK1, 3-phosphoinositi 100.0 4.8E-53 1.7E-57 422.7 16.0 249 436-702 32-283 (311)
6 4fih_A Serine/threonine-protei 100.0 3.1E-52 1E-56 423.4 22.1 249 436-703 74-323 (346)
7 4aoj_A High affinity nerve gro 100.0 5.4E-52 1.8E-56 423.1 23.7 254 436-706 41-315 (329)
8 3hyh_A Carbon catabolite-derep 100.0 6.3E-52 2.2E-56 409.3 21.3 248 436-703 13-262 (275)
9 4fie_A Serine/threonine-protei 100.0 6.1E-51 2.1E-55 424.2 23.4 249 436-703 151-400 (423)
10 3fpq_A Serine/threonine-protei 100.0 8.1E-51 2.8E-55 405.2 21.0 246 439-703 29-282 (290)
11 3ubd_A Ribosomal protein S6 ki 100.0 1.1E-51 3.8E-56 413.2 13.7 249 436-703 24-281 (304)
12 4g3f_A NF-kappa-beta-inducing 100.0 8.1E-51 2.8E-55 411.9 19.8 247 436-705 58-311 (336)
13 4ase_A Vascular endothelial gr 100.0 4.2E-50 1.4E-54 412.3 18.3 263 429-706 57-343 (353)
14 4g31_A Eukaryotic translation 100.0 1.4E-49 4.7E-54 400.5 19.8 251 435-703 4-279 (299)
15 3hmm_A TGF-beta receptor type- 100.0 2.5E-49 8.4E-54 401.1 19.5 261 436-706 3-293 (303)
16 4b99_A Mitogen-activated prote 100.0 2.4E-46 8.3E-51 391.4 20.9 257 435-703 53-344 (398)
17 4f9c_A Cell division cycle 7-r 100.0 1.5E-45 5.2E-50 381.5 20.3 200 429-642 14-248 (361)
18 3v5w_A G-protein coupled recep 100.0 1.3E-45 4.4E-50 400.9 19.8 252 435-703 188-449 (689)
19 3rgz_A Protein brassinosteroid 100.0 1.6E-44 5.4E-49 415.7 29.1 360 2-363 293-751 (768)
20 3uto_A Twitchin; kinase, muscl 100.0 3.5E-45 1.2E-49 402.0 21.2 252 435-703 156-410 (573)
21 3p86_A Serine/threonine-protei 100.0 1.1E-43 3.9E-48 363.0 20.3 262 430-706 31-294 (309)
22 3uim_A Brassinosteroid insensi 100.0 2E-43 7E-48 365.3 21.8 278 425-706 19-307 (326)
23 3fxz_A Serine/threonine-protei 100.0 8.6E-43 2.9E-47 354.8 23.9 250 435-703 19-269 (297)
24 2qkw_B Protein kinase; three-h 100.0 5.2E-43 1.8E-47 361.2 20.5 268 430-706 33-311 (321)
25 1o6l_A RAC-beta serine/threoni 100.0 8.3E-43 2.8E-47 359.8 21.9 250 436-703 5-260 (337)
26 3fe3_A MAP/microtubule affinit 100.0 8.3E-43 2.8E-47 359.0 21.4 251 434-704 13-265 (328)
27 3zgw_A Maternal embryonic leuc 100.0 6.6E-43 2.3E-47 361.5 19.8 252 433-704 7-261 (347)
28 4eqm_A Protein kinase; transfe 100.0 6.6E-43 2.3E-47 355.2 18.9 259 435-706 10-271 (294)
29 2yab_A Death-associated protei 100.0 1.5E-42 5.3E-47 361.1 22.1 255 434-703 10-272 (361)
30 3soa_A Calcium/calmodulin-depe 100.0 1.3E-42 4.5E-47 371.0 21.6 257 433-704 8-268 (444)
31 3s95_A LIMK-1, LIM domain kina 100.0 6.7E-42 2.3E-46 351.2 25.0 254 435-706 9-278 (310)
32 3txo_A PKC-L, NPKC-ETA, protei 100.0 7.9E-43 2.7E-47 362.4 16.9 251 435-703 22-280 (353)
33 1tki_A Titin; serine kinase, m 100.0 1.7E-42 6E-47 356.1 19.0 252 435-704 4-258 (321)
34 2c30_A Serine/threonine-protei 100.0 1.1E-41 3.8E-46 350.5 24.8 262 424-704 23-295 (321)
35 2psq_A Fibroblast growth facto 100.0 7.2E-42 2.5E-46 358.7 23.8 255 435-706 80-360 (370)
36 4dc2_A Protein kinase C IOTA t 100.0 2.7E-42 9.1E-47 362.2 20.2 254 435-698 51-307 (396)
37 2nru_A Interleukin-1 receptor- 100.0 5.9E-41 2E-45 343.8 29.5 275 424-706 13-302 (307)
38 4euu_A Serine/threonine-protei 100.0 1.4E-41 4.6E-46 350.3 24.7 265 435-705 8-304 (319)
39 3c0i_A Peripheral plasma membr 100.0 1.1E-42 3.9E-47 362.4 16.7 258 434-703 22-286 (351)
40 2bdw_A Hypothetical protein K1 100.0 4.7E-42 1.6E-46 358.7 21.3 256 433-704 26-285 (362)
41 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.3E-42 7.8E-47 356.1 18.0 249 435-703 8-258 (336)
42 3a8x_A Protein kinase C IOTA t 100.0 7.8E-42 2.7E-46 354.3 22.0 253 436-698 9-264 (345)
43 3kul_A Ephrin type-A receptor 100.0 1.1E-41 3.6E-46 351.3 22.6 253 435-706 48-309 (325)
44 2y0a_A Death-associated protei 100.0 5.3E-42 1.8E-46 353.7 19.9 255 435-704 10-272 (326)
45 1xjd_A Protein kinase C, theta 100.0 1.9E-42 6.6E-47 358.0 16.5 253 433-703 14-269 (345)
46 3niz_A Rhodanese family protei 100.0 1.4E-41 4.9E-46 348.2 22.7 260 433-703 18-300 (311)
47 3rgz_A Protein brassinosteroid 100.0 4.8E-41 1.6E-45 386.7 29.1 348 1-348 267-715 (768)
48 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.6E-41 5.6E-46 340.6 21.9 252 435-706 7-260 (268)
49 1fot_A TPK1 delta, CAMP-depend 100.0 1.1E-41 3.9E-46 348.8 21.1 247 436-703 6-258 (318)
50 2i0e_A Protein kinase C-beta I 100.0 7.1E-42 2.4E-46 355.0 19.0 252 434-703 18-276 (353)
51 4hcu_A Tyrosine-protein kinase 100.0 1.3E-41 4.5E-46 341.4 20.1 251 435-706 9-262 (269)
52 3lb7_A RAF proto-oncogene seri 100.0 3.3E-41 1.1E-45 344.7 23.2 257 435-706 35-296 (307)
53 4fr4_A YANK1, serine/threonine 100.0 1.6E-41 5.4E-46 355.2 21.3 252 436-703 15-271 (384)
54 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.5E-41 5.2E-46 352.6 20.3 248 435-703 40-293 (350)
55 3cbl_A C-FES, proto-oncogene t 100.0 1.1E-41 3.9E-46 358.5 19.5 254 435-706 113-370 (377)
56 3qd2_B Eukaryotic translation 100.0 2.4E-41 8.4E-46 350.9 21.6 253 434-704 4-326 (332)
57 3q4u_A Activin receptor type-1 100.0 1.4E-41 4.8E-46 347.4 19.4 258 434-706 6-298 (301)
58 3kn6_A Ribosomal protein S6 ki 100.0 1E-41 3.5E-46 351.3 18.0 250 441-703 16-270 (325)
59 3a62_A Ribosomal protein S6 ki 100.0 2.8E-41 9.5E-46 348.5 21.2 251 435-703 16-276 (327)
60 2qol_A Ephrin receptor; recept 100.0 2.8E-41 9.5E-46 354.4 21.4 254 435-706 44-305 (373)
61 1kob_A Twitchin; kinase, intra 100.0 3.1E-41 1.1E-45 354.4 21.5 253 435-704 50-305 (387)
62 3cok_A Serine/threonine-protei 100.0 2E-41 7E-46 341.9 19.3 252 435-703 10-262 (278)
63 3v47_A TOLL-like receptor 5B a 100.0 4.3E-41 1.5E-45 364.9 23.2 332 3-334 30-415 (455)
64 3o0g_A Cell division protein k 100.0 3.6E-41 1.2E-45 342.5 20.9 258 436-703 2-282 (292)
65 2r5t_A Serine/threonine-protei 100.0 1E-41 3.5E-46 356.2 17.2 247 435-699 37-285 (373)
66 2eue_A Carbon catabolite derep 100.0 3.9E-41 1.3E-45 339.2 20.8 248 436-703 13-262 (275)
67 1ob3_A PFPK5, cell division co 100.0 2.7E-41 9.4E-46 342.6 19.6 258 436-704 2-281 (288)
68 2y94_A 5'-AMP-activated protei 100.0 4E-41 1.4E-45 361.7 21.8 250 435-703 15-266 (476)
69 3ork_A Serine/threonine protei 100.0 4.8E-42 1.6E-46 352.2 14.0 256 434-703 10-273 (311)
70 2id5_A Lingo-1, leucine rich r 100.0 1.6E-40 5.5E-45 362.4 26.4 348 6-356 14-362 (477)
71 3soc_A Activin receptor type-2 100.0 1.8E-41 6.2E-46 349.4 17.8 263 435-706 23-314 (322)
72 2zv2_A Calcium/calmodulin-depe 100.0 5.6E-41 1.9E-45 342.2 21.1 252 435-703 12-292 (298)
73 2rku_A Serine/threonine-protei 100.0 9E-41 3.1E-45 340.1 22.4 252 435-704 14-266 (294)
74 3gen_A Tyrosine-protein kinase 100.0 5.1E-41 1.7E-45 339.9 20.3 252 435-706 23-276 (283)
75 2qr7_A Ribosomal protein S6 ki 100.0 2.3E-41 7.8E-46 350.3 18.0 253 433-703 19-277 (342)
76 2w4o_A Calcium/calmodulin-depe 100.0 2.9E-41 1E-45 351.3 18.9 252 434-704 51-306 (349)
77 3dtc_A Mitogen-activated prote 100.0 6.7E-41 2.3E-45 336.8 20.7 251 435-706 6-269 (271)
78 4ejn_A RAC-alpha serine/threon 100.0 8.3E-42 2.8E-46 368.1 14.9 251 435-703 147-404 (446)
79 3vhe_A Vascular endothelial gr 100.0 2.4E-41 8.2E-46 354.9 17.8 263 429-706 15-351 (359)
80 3tt0_A Basic fibroblast growth 100.0 1.1E-40 3.8E-45 351.9 22.9 255 435-706 68-348 (382)
81 3l9p_A Anaplastic lymphoma kin 100.0 4.3E-41 1.5E-45 352.6 19.6 256 435-706 70-341 (367)
82 3tki_A Serine/threonine-protei 100.0 4.6E-41 1.6E-45 346.0 19.4 254 434-704 5-262 (323)
83 3v8s_A RHO-associated protein 100.0 2.9E-42 1E-46 364.1 10.7 258 432-704 65-330 (410)
84 1luf_A Muscle-specific tyrosin 100.0 6.2E-41 2.1E-45 349.5 20.5 259 432-706 43-331 (343)
85 3kk8_A Calcium/calmodulin depe 100.0 8.4E-41 2.9E-45 338.6 20.7 254 434-703 4-261 (284)
86 2a2a_A Death-associated protei 100.0 6.3E-41 2.2E-45 345.5 20.1 256 434-704 10-273 (321)
87 3fdn_A Serine/threonine-protei 100.0 6.6E-41 2.2E-45 338.3 19.6 250 435-704 8-258 (279)
88 2h34_A Serine/threonine-protei 100.0 4.2E-41 1.4E-45 344.7 18.4 259 433-706 31-292 (309)
89 2ivs_A Proto-oncogene tyrosine 100.0 1.2E-40 4.3E-45 342.6 21.7 256 435-706 22-307 (314)
90 3ugc_A Tyrosine-protein kinase 100.0 6.7E-41 2.3E-45 341.2 19.5 260 435-706 9-287 (295)
91 2owb_A Serine/threonine-protei 100.0 1.1E-40 3.7E-45 345.7 21.1 251 435-703 40-291 (335)
92 2pmi_A Negative RE, cyclin-dep 100.0 8.7E-41 3E-45 343.5 19.9 259 435-703 4-293 (317)
93 2izr_A Casein kinase I isoform 100.0 1.7E-41 5.7E-46 351.3 14.7 255 435-706 8-277 (330)
94 3c4z_A Rhodopsin kinase; Ser/T 100.0 9.3E-41 3.2E-45 362.6 21.0 258 435-703 184-448 (543)
95 2x4f_A Myosin light chain kina 100.0 6.9E-41 2.3E-45 351.1 19.2 246 441-703 94-342 (373)
96 3qup_A Tyrosine-protein kinase 100.0 1.4E-40 4.7E-45 343.6 21.1 257 434-706 21-294 (323)
97 2wqm_A Serine/threonine-protei 100.0 1E-40 3.5E-45 342.4 19.9 261 435-706 31-293 (310)
98 4eut_A Serine/threonine-protei 100.0 8.9E-41 3.1E-45 354.2 20.0 266 435-706 8-305 (396)
99 4f0f_A Serine/threonine-protei 100.0 4.8E-40 1.6E-44 333.5 24.2 254 435-706 18-285 (287)
100 3f3z_A Calcium/calmodulin-depe 100.0 1.2E-40 4E-45 336.1 19.7 251 434-703 7-261 (277)
101 3hko_A Calcium/calmodulin-depe 100.0 3.6E-41 1.2E-45 351.4 16.4 262 431-703 21-330 (345)
102 1rjb_A FL cytokine receptor; k 100.0 2.6E-41 8.9E-46 352.3 15.1 258 434-706 43-330 (344)
103 3og7_A AKAP9-BRAF fusion prote 100.0 1.8E-40 6.3E-45 336.7 20.5 257 435-706 23-284 (289)
104 1qcf_A Haematopoetic cell kina 100.0 1.1E-40 3.6E-45 359.9 19.6 252 435-706 187-440 (454)
105 2eva_A TAK1 kinase - TAB1 chim 100.0 2.5E-40 8.5E-45 338.5 21.3 251 436-706 8-259 (307)
106 1t46_A HOMO sapiens V-KIT hard 100.0 1.2E-40 4.2E-45 342.5 19.1 257 435-706 22-303 (313)
107 2y7j_A Phosphorylase B kinase 100.0 1.8E-40 6.1E-45 347.6 20.3 264 425-703 83-359 (365)
108 1mp8_A Focal adhesion kinase 1 100.0 2.3E-40 7.7E-45 334.7 20.4 252 435-706 14-272 (281)
109 3p1a_A MYT1 kinase, membrane-a 100.0 1.4E-40 4.6E-45 341.1 19.0 248 435-704 56-305 (311)
110 4agu_A Cyclin-dependent kinase 100.0 3.4E-40 1.2E-44 338.8 21.9 262 435-703 2-284 (311)
111 3gni_B Strad alpha; kinase fol 100.0 1.6E-40 5.5E-45 352.1 19.9 264 435-703 24-333 (389)
112 3uc3_A Serine/threonine-protei 100.0 2.9E-40 9.8E-45 345.3 21.5 253 435-704 19-275 (361)
113 4aw2_A Serine/threonine-protei 100.0 4.5E-41 1.6E-45 357.7 15.7 262 430-703 68-338 (437)
114 1k9a_A Carboxyl-terminal SRC k 100.0 3.7E-40 1.2E-44 355.0 22.6 248 435-706 192-441 (450)
115 2pvf_A Fibroblast growth facto 100.0 4.2E-40 1.4E-44 341.3 22.2 256 435-706 34-314 (334)
116 1csn_A Casein kinase-1; phosph 100.0 2.2E-40 7.4E-45 338.1 19.7 257 435-706 9-279 (298)
117 3dls_A PAS domain-containing s 100.0 1.5E-40 5E-45 343.9 18.5 247 433-704 21-275 (335)
118 4e5w_A Tyrosine-protein kinase 100.0 2.8E-40 9.6E-45 337.9 20.2 260 436-706 21-298 (302)
119 3bhy_A Death-associated protei 100.0 2E-40 6.9E-45 335.6 18.9 254 435-703 4-265 (283)
120 3t9t_A Tyrosine-protein kinase 100.0 2.5E-40 8.6E-45 331.9 19.4 250 436-706 8-260 (267)
121 2acx_A G protein-coupled recep 100.0 1.7E-40 5.8E-45 361.1 19.6 256 435-703 183-444 (576)
122 3kmu_A ILK, integrin-linked ki 100.0 6E-40 2E-44 329.9 22.1 251 435-706 9-266 (271)
123 2vgo_A Serine/threonine-protei 100.0 3.2E-40 1.1E-44 334.2 20.3 249 435-703 13-262 (284)
124 3nyv_A Calmodulin-domain prote 100.0 1.1E-40 3.8E-45 363.7 18.1 254 434-703 24-281 (484)
125 2vd5_A DMPK protein; serine/th 100.0 2.6E-41 9E-46 357.0 12.6 261 430-703 55-327 (412)
126 3poz_A Epidermal growth factor 100.0 1.9E-40 6.4E-45 342.6 18.7 253 435-706 14-274 (327)
127 2w5a_A Serine/threonine-protei 100.0 6.8E-41 2.3E-45 338.3 15.0 257 435-706 5-270 (279)
128 1nxk_A MAP kinase-activated pr 100.0 9.5E-40 3.2E-44 345.9 24.3 253 435-704 60-322 (400)
129 1u5q_A Serine/threonine protei 100.0 3.7E-40 1.3E-44 342.4 20.6 249 436-704 54-306 (348)
130 1p4o_A Insulin-like growth fac 100.0 1.1E-40 3.8E-45 344.2 16.4 259 432-706 21-295 (322)
131 3vq2_A TLR4, TOLL-like recepto 100.0 9.8E-40 3.3E-44 367.6 25.3 206 146-352 350-560 (606)
132 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.7E-40 9.3E-45 356.2 19.7 251 435-706 183-436 (452)
133 2i1m_A Macrophage colony-stimu 100.0 1.2E-40 4E-45 345.7 15.7 259 433-706 43-322 (333)
134 3kfa_A Tyrosine-protein kinase 100.0 1.1E-40 3.7E-45 338.5 15.0 254 434-706 11-267 (288)
135 1opk_A P150, C-ABL, proto-onco 100.0 3.2E-40 1.1E-44 359.4 19.4 253 435-706 219-474 (495)
136 3gxj_A TGF-beta receptor type- 100.0 1.3E-41 4.4E-46 348.1 7.8 257 435-706 2-293 (303)
137 1qpc_A LCK kinase; alpha beta 100.0 1E-39 3.5E-44 329.6 21.5 251 435-706 12-265 (279)
138 3dbq_A Dual specificity protei 100.0 4.9E-40 1.7E-44 341.9 19.6 252 435-704 8-274 (343)
139 3a7i_A MST3 kinase, serine/thr 100.0 2.1E-39 7.3E-44 331.4 23.8 250 435-704 21-271 (303)
140 3op5_A Serine/threonine-protei 100.0 7.2E-41 2.5E-45 351.2 13.2 261 435-706 34-325 (364)
141 2jam_A Calcium/calmodulin-depe 100.0 5E-40 1.7E-44 336.2 19.0 251 434-703 7-261 (304)
142 3kex_A Receptor tyrosine-prote 100.0 2.8E-40 9.5E-45 341.2 17.2 252 436-706 13-272 (325)
143 3is5_A Calcium-dependent prote 100.0 8.7E-40 3E-44 330.9 20.4 253 435-703 21-278 (285)
144 3pfq_A PKC-B, PKC-beta, protei 100.0 5.8E-40 2E-44 368.9 21.1 252 434-703 339-597 (674)
145 2zmd_A Dual specificity protei 100.0 6.9E-40 2.4E-44 345.9 20.4 251 436-704 56-321 (390)
146 1u59_A Tyrosine-protein kinase 100.0 1.6E-39 5.6E-44 329.4 22.3 252 436-706 9-268 (287)
147 3q5i_A Protein kinase; CDPK, m 100.0 6.8E-40 2.3E-44 358.7 21.0 254 434-703 34-301 (504)
148 2clq_A Mitogen-activated prote 100.0 3.1E-39 1.1E-43 329.0 24.4 252 437-703 23-278 (295)
149 3mdy_A Bone morphogenetic prot 100.0 1.6E-39 5.3E-44 338.0 22.6 263 432-706 33-327 (337)
150 1mqb_A Ephrin type-A receptor 100.0 1.5E-39 5E-44 336.7 22.2 252 436-706 44-305 (333)
151 3llt_A Serine/threonine kinase 100.0 3.3E-40 1.1E-44 346.2 17.5 255 432-703 31-355 (360)
152 3mtl_A Cell division protein k 100.0 2.4E-40 8.2E-45 341.4 16.1 256 436-703 2-281 (324)
153 3ttj_A Mitogen-activated prote 100.0 1.1E-39 3.7E-44 351.6 21.6 259 435-704 61-356 (464)
154 1ua2_A CAK, cell division prot 100.0 7.9E-40 2.7E-44 340.8 19.9 262 433-704 7-292 (346)
155 2h6d_A 5'-AMP-activated protei 100.0 6.5E-40 2.2E-44 330.6 18.6 251 435-704 10-262 (276)
156 3lm5_A Serine/threonine-protei 100.0 2.3E-40 7.9E-45 342.0 15.6 263 428-704 20-288 (327)
157 3lij_A Calcium/calmodulin depe 100.0 7.4E-40 2.5E-44 357.5 20.4 252 435-703 36-291 (494)
158 2xir_A Vascular endothelial gr 100.0 6.8E-40 2.3E-44 337.4 18.9 263 429-706 20-306 (316)
159 3lxl_A Tyrosine-protein kinase 100.0 1E-39 3.5E-44 337.5 20.0 260 435-706 22-299 (327)
160 2ac3_A MAP kinase-interacting 100.0 5.7E-40 2E-44 337.9 17.9 261 435-704 11-296 (316)
161 3gbz_A Kinase, CMGC CDK; ssgci 100.0 5E-40 1.7E-44 339.7 17.6 259 433-703 31-318 (329)
162 3lzb_A Epidermal growth factor 100.0 9.1E-40 3.1E-44 337.2 19.4 253 435-706 14-274 (327)
163 3lxp_A Non-receptor tyrosine-p 100.0 1.3E-39 4.5E-44 335.0 20.5 256 438-706 33-306 (318)
164 3oz6_A Mitogen-activated prote 100.0 1.1E-39 3.8E-44 345.4 20.4 259 433-704 6-329 (388)
165 3i6u_A CDS1, serine/threonine- 100.0 3.8E-40 1.3E-44 351.4 16.9 257 433-704 132-400 (419)
166 3mwu_A Calmodulin-domain prote 100.0 4.9E-40 1.7E-44 358.4 18.0 254 434-704 20-277 (486)
167 3c1x_A Hepatocyte growth facto 100.0 6.5E-40 2.2E-44 343.4 18.2 252 437-706 90-351 (373)
168 3brb_A Proto-oncogene tyrosine 100.0 1.7E-39 5.7E-44 333.9 20.9 257 434-706 32-304 (313)
169 3f66_A Hepatocyte growth facto 100.0 2.1E-39 7E-44 330.8 21.3 254 435-706 24-287 (298)
170 2v62_A Serine/threonine-protei 100.0 5.1E-40 1.7E-44 342.1 16.8 261 435-706 36-324 (345)
171 3g33_A Cell division protein k 100.0 1.2E-39 4.1E-44 334.0 19.2 261 434-704 7-297 (308)
172 3j0a_A TOLL-like receptor 5; m 100.0 2E-39 7E-44 377.0 23.5 350 2-351 23-561 (844)
173 2yex_A Serine/threonine-protei 100.0 1.4E-39 4.9E-44 328.1 19.3 254 434-704 5-262 (276)
174 3cc6_A Protein tyrosine kinase 100.0 1.7E-39 5.7E-44 328.4 19.8 253 435-706 11-269 (281)
175 3t6q_A CD180 antigen; protein- 100.0 8E-39 2.7E-43 360.1 27.5 299 52-351 255-561 (606)
176 1xbb_A Tyrosine-protein kinase 100.0 2.3E-39 7.8E-44 329.1 20.7 253 435-706 15-275 (291)
177 1b6c_B TGF-B superfamily recep 100.0 2.3E-39 7.9E-44 337.4 21.2 257 432-706 38-332 (342)
178 3pls_A Macrophage-stimulating 100.0 4.8E-39 1.7E-43 328.1 23.1 252 437-706 22-283 (298)
179 4hgt_A Casein kinase I isoform 100.0 1.8E-39 6.3E-44 330.9 19.9 259 433-706 6-276 (296)
180 4eco_A Uncharacterized protein 100.0 1.8E-39 6E-44 365.0 21.6 347 1-354 204-604 (636)
181 4aaa_A Cyclin-dependent kinase 100.0 4.5E-40 1.5E-44 340.7 15.5 262 435-703 24-306 (331)
182 4fvq_A Tyrosine-protein kinase 100.0 1.2E-39 3.9E-44 331.1 18.1 247 435-706 7-271 (289)
183 1fvr_A Tyrosine-protein kinase 100.0 2.1E-39 7.1E-44 335.2 20.1 253 436-706 25-296 (327)
184 1phk_A Phosphorylase kinase; g 100.0 2.5E-39 8.4E-44 330.2 20.3 257 432-703 13-283 (298)
185 2yfx_A Tyrosine-protein kinase 100.0 2.2E-39 7.6E-44 335.0 20.0 256 435-706 29-300 (327)
186 1x8b_A WEE1HU, WEE1-like prote 100.0 2.1E-39 7E-44 329.3 19.4 249 434-704 9-280 (289)
187 3byv_A Rhoptry kinase; malaria 100.0 1.2E-40 4.2E-45 351.0 10.7 245 435-703 72-359 (377)
188 1cm8_A Phosphorylated MAP kina 100.0 2.1E-39 7.1E-44 339.6 19.9 258 434-703 23-307 (367)
189 3uzp_A CKI-delta, CKID, casein 100.0 3.2E-39 1.1E-43 329.1 20.7 258 434-706 7-276 (296)
190 3com_A Serine/threonine-protei 100.0 5.5E-39 1.9E-43 330.3 22.6 252 433-703 26-278 (314)
191 1byg_A CSK, protein (C-termina 100.0 1.9E-39 6.5E-44 327.4 18.8 248 435-706 20-269 (278)
192 3g2f_A Bone morphogenetic prot 100.0 1.4E-39 4.8E-44 338.1 18.3 261 435-706 12-314 (336)
193 3q60_A ROP5B; pseudokinase, tr 100.0 7.1E-40 2.4E-44 344.6 15.9 256 436-703 62-352 (371)
194 3t6q_A CD180 antigen; protein- 100.0 3.4E-38 1.2E-42 355.0 30.4 344 4-348 34-460 (606)
195 2wtk_C Serine/threonine-protei 100.0 6.3E-39 2.1E-43 328.4 22.2 254 434-704 3-264 (305)
196 1t4h_A Serine/threonine-protei 100.0 4.5E-39 1.5E-43 326.8 21.0 250 436-704 26-283 (290)
197 2a19_B Interferon-induced, dou 100.0 1.9E-39 6.6E-44 328.6 18.0 246 433-706 8-270 (284)
198 2ycf_A Serine/threonine-protei 100.0 1.1E-39 3.7E-44 336.5 16.3 255 434-703 8-274 (322)
199 3rp9_A Mitogen-activated prote 100.0 3.7E-39 1.3E-43 349.1 21.1 195 435-637 52-280 (458)
200 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2.8E-39 9.7E-44 339.4 19.6 246 435-705 64-334 (365)
201 2h8h_A Proto-oncogene tyrosine 100.0 1.3E-39 4.4E-44 357.8 17.5 252 435-706 266-519 (535)
202 1u46_A ACK-1, activated CDC42 100.0 2.3E-39 7.8E-44 329.3 17.9 254 435-706 17-280 (291)
203 3n9x_A Phosphotransferase; mal 100.0 4.5E-39 1.5E-43 344.8 21.2 201 434-642 24-253 (432)
204 2ozo_A Tyrosine-protein kinase 100.0 5.7E-39 1.9E-43 357.6 22.2 245 443-706 343-594 (613)
205 2r3i_A Cell division protein k 100.0 6.2E-39 2.1E-43 327.4 20.2 258 436-703 3-283 (299)
206 2j7t_A Serine/threonine-protei 100.0 2E-39 6.9E-44 331.5 16.6 253 434-703 17-275 (302)
207 2z63_A TOLL-like receptor 4, v 100.0 1.1E-38 3.6E-43 356.7 23.8 169 164-333 367-537 (570)
208 3mi9_A Cell division protein k 100.0 5.5E-39 1.9E-43 335.5 19.9 258 435-704 16-312 (351)
209 2xrw_A Mitogen-activated prote 100.0 6.8E-39 2.3E-43 336.8 20.7 254 435-703 24-318 (371)
210 2jii_A Serine/threonine-protei 100.0 5.9E-40 2E-44 342.8 12.4 256 435-706 41-332 (352)
211 2buj_A Serine/threonine-protei 100.0 3.5E-39 1.2E-43 332.2 17.9 257 435-706 28-302 (317)
212 1vzo_A Ribosomal protein S6 ki 100.0 1.2E-39 4E-44 340.2 14.5 256 436-705 54-323 (355)
213 3eqc_A Dual specificity mitoge 100.0 2.2E-39 7.6E-44 339.8 16.4 259 435-704 32-325 (360)
214 2vwi_A Serine/threonine-protei 100.0 1.6E-39 5.4E-44 332.6 14.6 261 433-703 12-287 (303)
215 2wei_A Calmodulin-domain prote 100.0 5E-39 1.7E-43 325.8 18.0 255 432-703 18-276 (287)
216 3fme_A Dual specificity mitoge 100.0 9.2E-39 3.1E-43 324.7 19.7 255 435-703 6-266 (290)
217 2x7f_A TRAF2 and NCK-interacti 100.0 1.5E-38 5.3E-43 328.8 21.7 253 433-703 21-286 (326)
218 2id5_A Lingo-1, leucine rich r 100.0 2.1E-38 7.3E-43 345.6 23.9 329 3-332 32-361 (477)
219 3j0a_A TOLL-like receptor 5; m 100.0 9.6E-39 3.3E-43 371.4 22.1 328 1-333 71-566 (844)
220 3ll6_A Cyclin G-associated kin 100.0 6.8E-39 2.3E-43 333.2 18.6 251 435-706 27-304 (337)
221 2w1i_A JAK2; chromosomal rearr 100.0 1E-38 3.6E-43 329.7 19.7 260 435-706 40-318 (326)
222 2fst_X Mitogen-activated prote 100.0 3.5E-39 1.2E-43 337.4 16.2 256 434-703 27-311 (367)
223 4e7w_A Glycogen synthase kinas 100.0 9.6E-39 3.3E-43 337.9 19.7 258 435-703 39-321 (394)
224 2pml_X PFPK7, Ser/Thr protein 100.0 3.1E-39 1E-43 337.3 15.7 255 435-703 30-322 (348)
225 4fl3_A Tyrosine-protein kinase 100.0 1.2E-38 4E-43 355.8 20.9 246 442-706 375-627 (635)
226 1zy4_A Serine/threonine-protei 100.0 1.1E-38 3.8E-43 326.3 19.0 252 434-704 4-284 (303)
227 3pg1_A Mitogen-activated prote 100.0 3E-39 1E-43 339.1 14.9 272 426-704 12-317 (362)
228 3qyz_A Mitogen-activated prote 100.0 1.3E-38 4.3E-43 334.2 19.4 260 434-703 25-313 (364)
229 3v47_A TOLL-like receptor 5B a 100.0 3.7E-38 1.3E-42 341.8 23.1 343 6-352 13-410 (455)
230 3sv0_A Casein kinase I-like; t 100.0 2.2E-38 7.4E-43 341.1 20.4 257 435-706 6-274 (483)
231 3kvw_A DYRK2, dual specificity 100.0 1.6E-38 5.5E-43 339.7 18.7 197 435-643 96-301 (429)
232 2z63_A TOLL-like receptor 4, v 100.0 5.8E-38 2E-42 350.7 23.9 348 3-352 28-533 (570)
233 3an0_A Dual specificity mitoge 100.0 1.9E-38 6.3E-43 330.1 18.4 255 434-703 49-310 (340)
234 4exu_A Mitogen-activated prote 100.0 3.1E-38 1.1E-42 331.8 20.1 258 434-704 40-324 (371)
235 1ziw_A TOLL-like receptor 3; i 100.0 6E-37 2E-41 349.6 31.9 328 5-332 250-627 (680)
236 3eb0_A Putative uncharacterize 100.0 1.6E-38 5.6E-43 335.6 17.5 260 432-703 3-321 (383)
237 3nsz_A CK II alpha, casein kin 100.0 3.2E-38 1.1E-42 326.9 19.4 254 435-704 35-320 (330)
238 3fhr_A MAP kinase-activated pr 100.0 1.8E-38 6.1E-43 328.8 17.1 253 434-703 26-287 (336)
239 3vq2_A TLR4, TOLL-like recepto 100.0 9.5E-38 3.2E-42 351.4 24.2 344 3-348 32-532 (606)
240 1ziw_A TOLL-like receptor 3; i 100.0 3.2E-37 1.1E-41 351.8 28.9 350 3-352 222-624 (680)
241 2b9h_A MAP kinase FUS3, mitoge 100.0 3E-38 1E-42 330.4 18.7 258 434-703 9-305 (353)
242 1wak_A Serine/threonine-protei 100.0 4E-38 1.4E-42 335.3 19.9 259 435-704 36-392 (397)
243 2y4i_B KSR2, HKSR2, kinase sup 100.0 8.8E-39 3E-43 329.6 14.0 254 434-706 31-298 (319)
244 3e3p_A Protein kinase, putativ 100.0 2.1E-38 7.1E-43 332.6 17.1 264 429-704 16-315 (360)
245 3rgf_A Cyclin-dependent kinase 100.0 9.8E-39 3.3E-43 340.0 14.6 262 434-704 18-334 (405)
246 1j1b_A Glycogen synthase kinas 100.0 7.2E-38 2.5E-42 333.9 20.8 256 436-703 54-336 (420)
247 3o6n_A APL1; leucine-rich repe 100.0 1.6E-37 5.6E-42 329.2 23.5 333 2-353 44-377 (390)
248 3cek_A Dual specificity protei 100.0 5.5E-38 1.9E-42 322.5 19.2 251 434-704 26-293 (313)
249 3aln_A Dual specificity mitoge 100.0 3.1E-38 1E-42 326.5 17.2 256 435-703 21-285 (327)
250 2rio_A Serine/threonine-protei 100.0 5.9E-38 2E-42 336.1 20.0 251 436-703 15-295 (434)
251 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.4E-37 4.8E-42 346.0 23.5 321 3-332 52-515 (562)
252 3qa8_A MGC80376 protein; kinas 100.0 2E-38 6.9E-43 347.8 16.4 262 435-702 13-296 (676)
253 3coi_A Mitogen-activated prote 100.0 5.7E-38 2E-42 328.0 18.9 256 435-703 23-305 (353)
254 4ecn_A Leucine-rich repeat pro 100.0 1.2E-37 4.1E-42 355.3 22.9 343 1-351 446-841 (876)
255 2z7x_B TOLL-like receptor 1, v 100.0 1.1E-37 3.7E-42 344.0 21.9 321 3-332 21-486 (520)
256 2j0j_A Focal adhesion kinase 1 100.0 8.6E-38 2.9E-42 350.2 20.7 253 435-706 389-647 (656)
257 1z57_A Dual specificity protei 100.0 1.5E-37 5.2E-42 323.3 20.9 252 435-703 13-328 (339)
258 2i6l_A Mitogen-activated prote 100.0 6E-38 2.1E-42 323.5 17.5 257 435-703 10-305 (320)
259 1blx_A Cyclin-dependent kinase 100.0 2.7E-38 9.3E-43 326.9 14.9 259 434-703 9-296 (326)
260 2iwi_A Serine/threonine-protei 100.0 5.1E-38 1.7E-42 322.6 16.8 249 430-704 25-284 (312)
261 2z81_A CD282 antigen, TOLL-lik 100.0 3.2E-37 1.1E-41 342.9 24.5 157 3-159 26-185 (549)
262 2z7x_B TOLL-like receptor 1, v 100.0 1.7E-37 5.9E-42 342.4 22.1 310 6-327 3-434 (520)
263 4eco_A Uncharacterized protein 100.0 1.5E-37 5.2E-42 349.3 22.0 322 1-331 247-604 (636)
264 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 4.5E-37 1.5E-41 341.9 24.2 337 4-351 32-511 (562)
265 3a99_A Proto-oncogene serine/t 100.0 1.8E-38 6.2E-43 326.7 11.6 248 431-704 38-294 (320)
266 2vx3_A Dual specificity tyrosi 100.0 6.4E-37 2.2E-41 323.2 23.0 200 434-643 52-260 (382)
267 3p23_A Serine/threonine-protei 100.0 2.2E-37 7.5E-42 330.4 19.5 247 436-703 24-283 (432)
268 2dyl_A Dual specificity mitoge 100.0 4.4E-37 1.5E-41 316.7 20.6 253 435-703 24-283 (318)
269 1q8y_A SR protein kinase; tran 100.0 2.3E-37 7.9E-42 326.4 18.9 258 435-703 18-333 (373)
270 4g8a_A TOLL-like receptor 4; l 100.0 1.7E-36 5.8E-41 343.6 27.0 330 3-332 52-585 (635)
271 3oja_B Anopheles plasmodium-re 100.0 9.5E-37 3.3E-41 341.0 23.7 334 2-354 50-384 (597)
272 2eu9_A Dual specificity protei 100.0 7.6E-37 2.6E-41 320.2 21.0 252 435-703 18-333 (355)
273 3uqc_A Probable conserved tran 100.0 3.4E-37 1.2E-41 311.0 16.9 231 435-706 30-261 (286)
274 2z81_A CD282 antigen, TOLL-lik 100.0 8.1E-37 2.8E-41 339.6 19.4 327 1-331 48-514 (549)
275 4fmz_A Internalin; leucine ric 100.0 1.2E-35 4.2E-40 309.8 27.0 304 2-327 43-346 (347)
276 4ecn_A Leucine-rich repeat pro 100.0 2.9E-36 1E-40 343.9 23.5 321 1-331 489-844 (876)
277 1o6v_A Internalin A; bacterial 100.0 4.3E-35 1.5E-39 317.9 28.0 322 4-349 47-387 (466)
278 3m2w_A MAP kinase-activated pr 100.0 6.6E-36 2.2E-40 304.6 18.4 231 435-703 16-256 (299)
279 2pzi_A Probable serine/threoni 100.0 9.3E-36 3.2E-40 337.4 18.9 236 435-704 79-322 (681)
280 3dzo_A Rhoptry kinase domain; 100.0 4.2E-36 1.4E-40 319.6 14.6 244 436-703 78-363 (413)
281 1o6v_A Internalin A; bacterial 100.0 2.6E-34 9.1E-39 311.7 26.9 306 2-331 67-392 (466)
282 1xku_A Decorin; proteoglycan, 100.0 7.2E-34 2.5E-38 293.9 26.0 288 28-325 32-330 (330)
283 2ft3_A Biglycan; proteoglycan, 100.0 5.4E-34 1.8E-38 295.0 24.3 287 28-325 34-331 (332)
284 2vuw_A Serine/threonine-protei 100.0 4.3E-36 1.5E-40 311.5 8.5 245 435-702 19-329 (336)
285 3o6n_A APL1; leucine-rich repe 100.0 5E-34 1.7E-38 302.4 23.6 311 25-352 43-354 (390)
286 4fmz_A Internalin; leucine ric 100.0 1.5E-33 5.2E-38 293.9 26.4 306 22-348 39-344 (347)
287 3bz5_A Internalin-J, INLJ; leu 100.0 4.3E-33 1.5E-37 299.5 27.0 299 2-329 41-354 (457)
288 4g8a_A TOLL-like receptor 4; l 100.0 3.7E-33 1.3E-37 316.1 27.6 342 7-351 35-581 (635)
289 1xku_A Decorin; proteoglycan, 100.0 5.1E-33 1.7E-37 287.5 25.6 289 4-301 32-330 (330)
290 2ft3_A Biglycan; proteoglycan, 100.0 2.6E-33 9E-38 289.8 23.2 288 4-301 34-331 (332)
291 3oja_B Anopheles plasmodium-re 100.0 3.4E-33 1.2E-37 312.2 23.9 311 25-352 49-360 (597)
292 3bz5_A Internalin-J, INLJ; leu 100.0 4.5E-32 1.5E-36 291.5 26.3 293 1-329 62-370 (457)
293 1ogq_A PGIP-2, polygalacturona 100.0 1.8E-32 6.1E-37 280.4 16.6 253 99-353 51-307 (313)
294 1ogq_A PGIP-2, polygalacturona 100.0 1E-32 3.5E-37 282.2 14.4 248 27-277 50-302 (313)
295 2z66_A Variable lymphocyte rec 100.0 5.7E-31 2E-35 269.1 18.9 280 6-288 10-296 (306)
296 1z7x_W Ribonuclease inhibitor; 100.0 3E-33 1E-37 303.8 -1.5 325 3-327 28-411 (461)
297 1jl5_A Outer protein YOPM; leu 100.0 1.7E-29 5.8E-34 271.2 27.5 240 51-328 131-371 (454)
298 1z7x_W Ribonuclease inhibitor; 100.0 9E-34 3.1E-38 307.9 -6.3 327 2-328 2-384 (461)
299 3zyj_A Leucine-rich repeat-con 100.0 7.6E-30 2.6E-34 274.5 22.5 252 77-332 45-297 (440)
300 2z80_A TOLL-like receptor 2, v 100.0 1.1E-30 3.9E-35 272.5 15.5 277 28-307 32-318 (353)
301 3zyi_A Leucine-rich repeat-con 100.0 9.9E-30 3.4E-34 274.6 23.3 252 77-332 56-308 (452)
302 2z80_A TOLL-like receptor 2, v 100.0 2.9E-30 9.8E-35 269.5 17.7 283 48-333 28-320 (353)
303 2z66_A Variable lymphocyte rec 100.0 2.8E-30 9.4E-35 264.0 16.5 275 30-332 10-292 (306)
304 1jl5_A Outer protein YOPM; leu 100.0 1.4E-29 4.7E-34 271.9 21.3 185 3-207 11-208 (454)
305 3zyi_A Leucine-rich repeat-con 100.0 4.2E-29 1.4E-33 269.7 24.8 245 30-279 57-303 (452)
306 3zyj_A Leucine-rich repeat-con 100.0 4.9E-29 1.7E-33 268.2 25.1 245 5-254 45-291 (440)
307 1ozn_A Reticulon 4 receptor; N 100.0 2E-29 6.7E-34 254.8 19.2 225 78-304 14-239 (285)
308 1ozn_A Reticulon 4 receptor; N 100.0 3E-29 1E-33 253.5 20.0 268 6-300 14-284 (285)
309 3g06_A SSPH2 (leucine-rich rep 100.0 5.1E-28 1.7E-32 267.4 27.1 268 4-314 41-308 (622)
310 4azs_A Methyltransferase WBDD; 100.0 1.6E-30 5.5E-35 285.7 3.7 187 444-640 242-437 (569)
311 3o53_A Protein LRIM1, AGAP0063 100.0 5.6E-30 1.9E-34 262.7 5.1 256 32-300 15-272 (317)
312 4fcg_A Uncharacterized protein 100.0 6E-28 2E-32 248.3 19.3 233 27-278 81-313 (328)
313 3g06_A SSPH2 (leucine-rich rep 100.0 5.2E-27 1.8E-31 259.4 27.3 262 28-332 41-302 (622)
314 3o53_A Protein LRIM1, AGAP0063 100.0 8.2E-30 2.8E-34 261.4 3.6 263 53-329 12-278 (317)
315 4fcg_A Uncharacterized protein 100.0 1.7E-27 5.7E-32 245.0 20.0 237 50-305 80-316 (328)
316 1wwl_A Monocyte differentiatio 99.9 2.3E-29 7.9E-34 257.4 3.9 248 23-280 39-310 (312)
317 1wwl_A Monocyte differentiatio 99.9 5.7E-29 2E-33 254.5 4.3 250 70-328 38-310 (312)
318 3oja_A Leucine-rich immune mol 99.9 9.9E-28 3.4E-32 260.1 13.9 238 48-322 31-270 (487)
319 2z62_A TOLL-like receptor 4, v 99.9 2.7E-26 9.2E-31 230.6 20.7 212 122-334 28-244 (276)
320 3oja_A Leucine-rich immune mol 99.9 9.1E-28 3.1E-32 260.4 9.7 236 26-274 33-270 (487)
321 2z62_A TOLL-like receptor 4, v 99.9 1E-25 3.5E-30 226.3 18.8 206 99-305 29-239 (276)
322 2o6q_A Variable lymphocyte rec 99.9 3.6E-25 1.2E-29 221.3 21.2 186 147-332 38-223 (270)
323 2o6q_A Variable lymphocyte rec 99.9 1.2E-24 4.2E-29 217.5 22.8 201 28-231 17-218 (270)
324 1p9a_G Platelet glycoprotein I 99.9 1.3E-24 4.5E-29 219.0 21.0 203 23-231 6-208 (290)
325 1p9a_G Platelet glycoprotein I 99.9 9.5E-25 3.3E-29 220.0 18.5 180 147-330 32-211 (290)
326 3rfs_A Internalin B, repeat mo 99.9 2E-25 6.9E-30 223.3 12.1 228 28-267 20-247 (272)
327 3en9_A Glycoprotease, O-sialog 99.9 6.4E-26 2.2E-30 247.8 8.8 186 439-641 339-538 (540)
328 3rfs_A Internalin B, repeat mo 99.9 6.1E-25 2.1E-29 219.8 14.5 225 53-313 21-245 (272)
329 3ogk_B Coronatine-insensitive 99.9 1.5E-26 5E-31 259.5 1.9 325 2-329 163-528 (592)
330 3goz_A Leucine-rich repeat-con 99.9 8E-26 2.8E-30 236.3 5.1 255 7-281 2-299 (362)
331 2xwt_C Thyrotropin receptor; s 99.9 7.4E-24 2.5E-28 207.7 17.1 207 12-228 20-236 (239)
332 3goz_A Leucine-rich repeat-con 99.9 4.9E-25 1.7E-29 230.3 5.7 255 55-329 2-299 (362)
333 2xwt_C Thyrotropin receptor; s 99.9 1.1E-23 3.7E-28 206.6 14.7 178 99-279 32-218 (239)
334 2ca6_A RAN GTPase-activating p 99.9 5.3E-26 1.8E-30 240.2 -2.1 263 18-300 23-340 (386)
335 2ast_B S-phase kinase-associat 99.9 9.6E-25 3.3E-29 226.2 6.1 223 51-276 47-282 (336)
336 1h6u_A Internalin H; cell adhe 99.9 4.5E-24 1.6E-28 217.3 10.7 195 48-257 38-232 (308)
337 3ogk_B Coronatine-insensitive 99.9 2.7E-25 9.1E-30 249.2 0.8 321 2-324 191-548 (592)
338 1h6u_A Internalin H; cell adhe 99.9 3.5E-23 1.2E-27 210.8 16.3 208 56-280 24-231 (308)
339 2p1m_B Transport inhibitor res 99.9 1.1E-25 3.7E-30 252.5 -3.0 322 2-326 104-493 (594)
340 2ca6_A RAN GTPase-activating p 99.9 3.8E-25 1.3E-29 233.7 1.0 188 143-330 91-319 (386)
341 4glp_A Monocyte differentiatio 99.9 3.2E-23 1.1E-27 211.7 14.4 223 52-280 65-308 (310)
342 2ast_B S-phase kinase-associat 99.9 2.4E-24 8.3E-29 223.2 4.7 253 28-288 48-315 (336)
343 3m19_A Variable lymphocyte rec 99.9 3.4E-22 1.2E-26 197.3 19.2 177 5-207 16-192 (251)
344 4glp_A Monocyte differentiatio 99.9 3.4E-23 1.2E-27 211.4 11.8 224 4-232 65-308 (310)
345 3m19_A Variable lymphocyte rec 99.9 4.8E-22 1.6E-26 196.3 19.2 177 77-279 16-192 (251)
346 1zar_A RIO2 kinase; serine kin 99.9 5.9E-23 2E-27 205.4 11.1 155 429-614 83-252 (282)
347 4ay9_X Follicle-stimulating ho 99.9 2.4E-22 8.4E-27 208.7 15.4 200 6-209 12-217 (350)
348 4ay9_X Follicle-stimulating ho 99.9 4.4E-22 1.5E-26 206.8 16.5 240 30-277 12-257 (350)
349 2p1m_B Transport inhibitor res 99.9 2.1E-23 7.2E-28 233.9 0.3 323 2-327 129-519 (594)
350 2o6s_A Variable lymphocyte rec 99.8 2.1E-20 7.3E-25 178.8 16.2 114 168-288 74-187 (208)
351 2v9t_B SLIT homolog 2 protein 99.8 5E-21 1.7E-25 184.4 11.3 155 174-331 15-169 (220)
352 2o6s_A Variable lymphocyte rec 99.8 2.3E-20 8E-25 178.5 15.8 177 79-264 11-187 (208)
353 1h6t_A Internalin B; cell adhe 99.8 1.8E-21 6.2E-26 196.2 8.2 172 49-233 44-215 (291)
354 2v70_A SLIT-2, SLIT homolog 2 99.8 8.3E-21 2.8E-25 182.9 11.2 156 174-332 15-171 (220)
355 1h6t_A Internalin B; cell adhe 99.8 2.9E-20 9.8E-25 187.5 14.6 188 53-255 26-213 (291)
356 1m9s_A Internalin B; cell inva 99.8 6.8E-21 2.3E-25 210.3 10.9 189 5-208 23-211 (605)
357 3cvr_A Invasion plasmid antige 99.8 4.2E-20 1.4E-24 201.5 16.2 189 28-243 60-255 (571)
358 2xot_A Amphoterin-induced prot 99.8 2.5E-20 8.6E-25 194.3 13.3 160 172-331 41-206 (361)
359 3cvr_A Invasion plasmid antige 99.8 1.1E-19 3.7E-24 198.3 18.0 186 52-264 60-252 (571)
360 1m9s_A Internalin B; cell inva 99.8 8.6E-20 2.9E-24 201.5 15.2 172 72-256 40-211 (605)
361 2v9t_B SLIT homolog 2 protein 99.8 2.5E-19 8.4E-24 172.5 15.9 149 7-158 15-164 (220)
362 3sb4_A Hypothetical leucine ri 99.8 7.2E-21 2.5E-25 195.9 5.2 284 26-321 24-328 (329)
363 3sb4_A Hypothetical leucine ri 99.8 9.1E-21 3.1E-25 195.1 5.7 281 3-297 25-328 (329)
364 2xot_A Amphoterin-induced prot 99.8 1.5E-19 5.1E-24 188.4 14.2 136 144-279 62-202 (361)
365 3e6j_A Variable lymphocyte rec 99.8 4.1E-19 1.4E-23 172.2 14.9 157 172-332 21-177 (229)
366 4fdw_A Leucine rich hypothetic 99.8 4.2E-18 1.4E-22 178.7 22.2 261 27-300 113-380 (401)
367 4fdw_A Leucine rich hypothetic 99.8 4.4E-18 1.5E-22 178.6 21.9 264 3-278 113-382 (401)
368 1xeu_A Internalin C; cellular 99.8 5.6E-20 1.9E-24 182.3 6.5 80 146-231 106-185 (263)
369 2v70_A SLIT-2, SLIT homolog 2 99.8 1.4E-18 4.9E-23 167.2 16.2 113 143-255 54-166 (220)
370 1xeu_A Internalin C; cellular 99.8 1.4E-19 4.8E-24 179.4 8.6 171 73-257 17-187 (263)
371 1zth_A RIO1 serine protein kin 99.8 6E-19 2.1E-23 174.3 11.9 139 438-591 49-219 (258)
372 3e6j_A Variable lymphocyte rec 99.8 5.8E-18 2E-22 164.1 17.0 151 101-255 22-172 (229)
373 4ezg_A Putative uncharacterize 99.8 2E-18 7E-23 163.3 12.7 152 72-230 41-193 (197)
374 1dce_A Protein (RAB geranylger 99.8 4.4E-21 1.5E-25 210.6 -6.8 203 48-273 346-567 (567)
375 4ezg_A Putative uncharacterize 99.8 3.9E-18 1.3E-22 161.3 13.1 153 167-327 41-194 (197)
376 1dce_A Protein (RAB geranylger 99.7 8.5E-21 2.9E-25 208.3 -8.4 188 72-281 346-548 (567)
377 1w8a_A SLIT protein; signaling 99.7 3.4E-18 1.1E-22 160.8 9.8 173 173-351 11-184 (192)
378 1w8a_A SLIT protein; signaling 99.7 2.5E-17 8.6E-22 154.8 12.6 133 197-332 11-144 (192)
379 2wfh_A SLIT homolog 2 protein 99.7 1.9E-17 6.5E-22 155.6 9.5 130 198-331 14-143 (193)
380 4fs7_A Uncharacterized protein 99.7 4.4E-16 1.5E-20 164.3 21.0 297 14-324 58-376 (394)
381 4b8c_D Glucose-repressible alc 99.7 1.2E-17 4.2E-22 189.2 8.9 189 128-327 207-404 (727)
382 2ell_A Acidic leucine-rich nuc 99.7 4E-17 1.4E-21 150.1 9.3 131 27-159 24-160 (168)
383 4gyi_A RIO2 kinase; protein ki 99.7 1.5E-17 5.2E-22 169.7 6.0 143 436-592 95-266 (397)
384 4b8c_D Glucose-repressible alc 99.7 7E-18 2.4E-22 191.2 3.7 181 66-255 215-404 (727)
385 2ell_A Acidic leucine-rich nuc 99.7 2.9E-16 1E-20 144.3 10.8 134 49-183 22-160 (168)
386 2je0_A Acidic leucine-rich nuc 99.7 1.1E-16 3.8E-21 143.8 7.5 126 3-130 17-148 (149)
387 2wfh_A SLIT homolog 2 protein 99.6 1.1E-15 3.9E-20 143.4 13.2 126 30-159 13-139 (193)
388 4fs7_A Uncharacterized protein 99.6 9.3E-15 3.2E-19 154.1 21.5 304 1-319 69-393 (394)
389 4gt6_A Cell surface protein; l 99.6 1.9E-14 6.6E-19 151.7 23.5 301 14-326 50-369 (394)
390 2o6r_A Variable lymphocyte rec 99.6 1E-15 3.4E-20 142.0 11.4 113 219-331 29-141 (177)
391 2je0_A Acidic leucine-rich nuc 99.6 1E-15 3.5E-20 137.5 9.3 127 194-322 17-148 (149)
392 1a9n_A U2A', U2A'; complex (nu 99.6 7.5E-16 2.6E-20 142.6 7.9 133 23-159 15-153 (176)
393 2o6r_A Variable lymphocyte rec 99.6 5.4E-15 1.8E-19 137.0 13.7 133 172-307 9-141 (177)
394 4gt6_A Cell surface protein; l 99.6 5.3E-14 1.8E-18 148.4 21.3 311 4-327 65-391 (394)
395 1a9n_A U2A', U2A'; complex (nu 99.6 3.7E-15 1.3E-19 137.9 8.3 106 147-255 43-153 (176)
396 1ds9_A Outer arm dynein; leuci 99.5 4.1E-17 1.4E-21 154.4 -6.8 151 27-183 18-185 (198)
397 1ds9_A Outer arm dynein; leuci 99.5 1.8E-16 6.2E-21 149.9 -2.4 152 169-327 17-185 (198)
398 3g39_A Variable lymphocyte rec 99.5 6.9E-14 2.4E-18 128.3 9.7 109 221-332 12-120 (170)
399 2r9u_A Variable lymphocyte rec 99.5 1.3E-13 4.4E-18 126.9 8.9 90 242-331 33-122 (174)
400 4h09_A Hypothetical leucine ri 99.4 9.3E-12 3.2E-16 130.5 23.9 288 23-323 42-342 (379)
401 3g39_A Variable lymphocyte rec 99.4 4.8E-13 1.6E-17 122.6 11.3 103 6-111 12-115 (170)
402 2r9u_A Variable lymphocyte rec 99.4 6E-13 2.1E-17 122.4 11.3 103 30-135 15-118 (174)
403 3un9_A NLR family member X1; l 99.4 8.3E-15 2.8E-19 152.1 -2.1 96 217-312 154-261 (372)
404 3un9_A NLR family member X1; l 99.4 1E-14 3.5E-19 151.5 -3.9 110 194-303 155-283 (372)
405 4h09_A Hypothetical leucine ri 99.4 3.8E-11 1.3E-15 125.8 22.0 298 3-313 46-355 (379)
406 3tm0_A Aminoglycoside 3'-phosp 99.3 8.8E-12 3E-16 123.5 11.1 147 432-590 10-213 (263)
407 2ifg_A High affinity nerve gro 99.3 8.8E-12 3E-16 129.0 9.4 131 199-332 13-146 (347)
408 2ifg_A High affinity nerve gro 99.2 3.3E-11 1.1E-15 124.7 10.2 103 7-111 12-116 (347)
409 1nd4_A Aminoglycoside 3'-phosp 99.1 7.6E-11 2.6E-15 116.7 8.0 137 437-590 21-214 (264)
410 2ra8_A Uncharacterized protein 99.1 9.4E-11 3.2E-15 120.4 7.2 157 164-325 166-341 (362)
411 3dxp_A Putative acyl-COA dehyd 99.1 6E-10 2.1E-14 115.6 11.7 145 440-590 42-248 (359)
412 2ra8_A Uncharacterized protein 99.0 6.7E-11 2.3E-15 121.5 3.7 184 47-253 135-341 (362)
413 3sg8_A APH(2'')-ID; antibiotic 98.9 1.3E-09 4.5E-14 110.2 8.7 185 441-641 25-287 (304)
414 3r70_A Aminoglycoside phosphot 98.7 9E-08 3.1E-12 97.3 12.5 138 437-592 38-239 (320)
415 1io0_A Tropomodulin; LRR prote 98.6 8.2E-09 2.8E-13 95.5 2.1 13 144-156 34-46 (185)
416 1io0_A Tropomodulin; LRR prote 98.6 1E-08 3.5E-13 95.0 2.4 62 266-327 93-164 (185)
417 4gkh_A Aminoglycoside 3'-phosp 98.5 6.6E-07 2.3E-11 88.6 13.0 135 443-590 31-223 (272)
418 3tdw_A Gentamicin resistance p 98.4 1.5E-06 5.1E-11 87.5 13.1 137 441-591 24-225 (306)
419 3d1u_A Putative fructosamine-3 98.3 2.3E-06 7.9E-11 85.0 11.3 78 438-522 17-97 (288)
420 3ovc_A Hygromycin-B 4-O-kinase 98.3 3.8E-06 1.3E-10 86.5 13.2 147 437-592 42-245 (362)
421 3rw6_A Nuclear RNA export fact 98.3 6.6E-08 2.2E-12 93.9 -0.1 78 241-320 169-257 (267)
422 3rw6_A Nuclear RNA export fact 98.3 9.3E-08 3.2E-12 92.8 1.0 62 217-280 169-234 (267)
423 3e4g_A ATP synthase subunit S, 98.3 3.1E-07 1.1E-11 82.5 3.4 83 219-301 62-150 (176)
424 3e4g_A ATP synthase subunit S, 98.3 4.7E-07 1.6E-11 81.3 3.8 87 194-280 61-154 (176)
425 3ats_A Putative uncharacterize 98.1 1.9E-06 6.4E-11 89.1 5.6 82 442-523 26-121 (357)
426 2olc_A MTR kinase, methylthior 98.0 2E-05 6.9E-10 82.5 10.9 78 441-520 35-120 (397)
427 2q83_A YTAA protein; 2635576, 98.0 3.1E-05 1.1E-09 79.3 11.9 148 435-590 27-252 (346)
428 3jr1_A Putative fructosamine-3 97.9 7.4E-05 2.5E-09 74.7 11.3 76 440-522 40-118 (312)
429 1pgv_A TMD-1, tropomodulin TMD 97.8 3E-06 1E-10 77.6 0.9 86 73-158 68-169 (197)
430 1pgv_A TMD-1, tropomodulin TMD 97.8 7.6E-06 2.6E-10 74.9 2.9 10 146-155 41-50 (197)
431 2pyw_A Uncharacterized protein 97.7 0.0002 6.9E-09 75.4 12.8 75 561-637 233-312 (420)
432 3f7w_A Putative fructosamine-3 97.6 0.00046 1.6E-08 68.5 12.6 80 436-522 15-97 (288)
433 3rfe_A Platelet glycoprotein I 97.5 7.9E-05 2.7E-09 63.7 5.2 62 269-332 11-73 (130)
434 3csv_A Aminoglycoside phosphot 97.4 0.00049 1.7E-08 70.0 10.7 143 442-592 24-219 (333)
435 2ppq_A HSK, HK, homoserine kin 97.3 0.0015 5.2E-08 65.9 12.9 159 426-590 7-217 (322)
436 1zyl_A Hypothetical protein YI 97.3 0.0026 8.8E-08 64.4 13.7 142 442-590 32-223 (328)
437 1nw1_A Choline kinase (49.2 KD 97.2 0.00081 2.8E-08 70.7 8.9 73 441-522 78-159 (429)
438 3dxq_A Choline/ethanolamine ki 97.2 0.00081 2.8E-08 67.2 8.4 142 438-591 20-203 (301)
439 3feg_A Choline/ethanolamine ki 97.1 0.0022 7.5E-08 65.8 10.6 142 441-590 55-254 (379)
440 2yle_A Protein spire homolog 1 97.1 0.0026 8.9E-08 58.3 9.8 104 519-640 32-135 (229)
441 2qg7_A Ethanolamine kinase PV0 97.0 0.0023 7.7E-08 67.6 10.4 74 441-522 113-188 (458)
442 3rfe_A Platelet glycoprotein I 96.7 0.0024 8.1E-08 54.5 6.1 37 52-88 32-68 (130)
443 3f2s_A CK, chetk-alpha, cholin 96.5 0.0055 1.9E-07 63.1 8.4 146 441-590 57-280 (401)
444 3c5i_A Choline kinase; choline 96.5 0.0034 1.2E-07 64.6 6.6 74 441-522 38-121 (369)
445 3i1a_A Spectinomycin phosphotr 96.4 0.016 5.4E-07 58.8 10.8 32 560-591 206-237 (339)
446 3mes_A Choline kinase; malaria 95.1 0.073 2.5E-06 55.3 9.9 141 441-590 75-291 (424)
447 3g15_A CK, chetk-alpha, cholin 94.4 0.11 3.6E-06 54.0 9.0 30 561-590 245-280 (401)
448 4ann_A ESSB; membrane protein, 93.2 0.18 6.2E-06 46.2 7.0 115 493-642 43-158 (215)
449 4ano_A ESSB; membrane protein, 90.8 0.64 2.2E-05 42.8 7.6 114 493-642 48-163 (219)
450 2lz0_A Uncharacterized protein 84.7 1.5 5.2E-05 34.7 5.5 47 108-155 6-52 (100)
451 2lz0_A Uncharacterized protein 79.5 3.7 0.00013 32.4 5.9 48 132-180 6-53 (100)
452 3cxl_A N-chimerin; SH2, RHO-GA 67.7 0.64 2.2E-05 48.9 -1.8 62 439-504 145-213 (463)
453 2ks1_B Epidermal growth factor 56.0 1.1 3.7E-05 29.1 -1.6 27 377-403 13-40 (44)
454 2jwa_A Receptor tyrosine-prote 54.6 0.92 3.2E-05 29.3 -2.1 27 377-403 14-40 (44)
455 2l2t_A Receptor tyrosine-prote 51.7 1.2 4.1E-05 28.8 -1.9 27 377-403 12-39 (44)
456 3ls8_A Phosphatidylinositol 3- 37.6 4E+02 0.014 28.5 13.5 46 537-589 454-501 (614)
457 1cja_A Protein (actin-fragmin 37.1 1E+02 0.0036 30.1 8.1 136 442-590 75-237 (342)
458 2x6h_A GH13170P, VPS34, phosph 34.6 4.9E+02 0.017 28.4 14.0 44 539-589 530-575 (696)
459 2k9y_A Ephrin type-A receptor 31.2 5.5 0.00019 25.3 -1.3 12 378-389 16-27 (41)
460 3eps_A Isocitrate dehydrogenas 26.3 5.8E+02 0.02 26.7 13.2 138 443-592 313-483 (578)
461 1iij_A ERBB-2 receptor protein 26.1 3.9 0.00013 24.9 -2.4 24 377-400 10-33 (35)
No 1
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-52 Score=420.32 Aligned_cols=257 Identities=25% Similarity=0.379 Sum_probs=203.4
Q ss_pred hcCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVY 514 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 514 (707)
.+++++.++||+|+||+||+|+++. .||||+++.... .....++|.+|++++++++|||||++++++.+ +..++||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVm 110 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDP-TPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEE
Confidence 3578889999999999999998753 589999875433 33456789999999999999999999998865 5689999
Q ss_pred eeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCC
Q 038671 515 EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPD 594 (707)
Q Consensus 515 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 594 (707)
||+++|+|.++++.. ..++++.++++++.||++||+|||++ +||||||||+|||+++++.+||+|||+|+.....
T Consensus 111 Ey~~gGsL~~~l~~~--~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~ 185 (307)
T 3omv_A 111 QWCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp ECCSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC----
T ss_pred EcCCCCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccC
Confidence 999999999999643 24699999999999999999999999 9999999999999999999999999999876533
Q ss_pred C--CCccccccccCCCCcccccc---CCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCC
Q 038671 595 S--SNWAELAGTYGYVAPELAYT---MKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTP 669 (707)
Q Consensus 595 ~--~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (707)
. ......+||+.|||||++.+ .+|+.++|||||||++|||+||+.||...... .............+..+.
T Consensus 186 ~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~---~~~~~~~~~~~~~p~~~~- 261 (307)
T 3omv_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR---DQIIFMVGRGYASPDLSK- 261 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH---HHHHHHHHTTCCCCCSTT-
T ss_pred CcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH---HHHHHHHhcCCCCCCccc-
Confidence 2 23445689999999999864 45899999999999999999999999643221 111111122222232222
Q ss_pred CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 670 SHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 670 ~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
...+.+.++.+++.+||+.||++|||++||++.|+
T Consensus 262 --~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le 296 (307)
T 3omv_A 262 --LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIE 296 (307)
T ss_dssp --SCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHH
T ss_pred --ccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 22334566899999999999999999999998875
No 2
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=4.3e-53 Score=430.41 Aligned_cols=252 Identities=21% Similarity=0.337 Sum_probs=206.0
Q ss_pred cCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEEE
Q 038671 436 NDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVY 514 (707)
Q Consensus 436 ~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 514 (707)
++|++.+.||+|+||+||+|+ ..+|+.||||++....... ...+.+.+|++++++++|||||++++++.+++.+|+||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSS-KEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCH-HHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCH-HHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 579999999999999999995 4679999999997654433 34678999999999999999999999999999999999
Q ss_pred eeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCC
Q 038671 515 EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPD 594 (707)
Q Consensus 515 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 594 (707)
||++||+|.+++.... ...+++..++.++.||+.||+|||++ |||||||||+|||++.+|.+||+|||+|+.....
T Consensus 103 Ey~~gg~L~~~i~~~~-~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQK-GVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp ECCTTCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred eCCCCCcHHHHHHHcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence 9999999999996433 34578999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCcchH
Q 038671 595 SSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHNVQ 674 (707)
Q Consensus 595 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (707)
.......+||+.|||||++.+..|+.++|||||||++|||+||+.||...+ ....+..+.....+..+.
T Consensus 179 ~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~--------~~~~~~~i~~~~~~~~~~--- 247 (350)
T 4b9d_A 179 VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS--------MKNLVLKIISGSFPPVSL--- 247 (350)
T ss_dssp HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS--------HHHHHHHHHHTCCCCCCT---
T ss_pred cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--------HHHHHHHHHcCCCCCCCc---
Confidence 333455689999999999999999999999999999999999999996422 222233333333322211
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 675 DKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 675 ~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
..+.++.+++.+||+.||++|||++|+++
T Consensus 248 ~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 248 HYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 23456899999999999999999999975
No 3
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.1e-52 Score=422.10 Aligned_cols=253 Identities=25% Similarity=0.449 Sum_probs=207.6
Q ss_pred cCCCCCceeeecCCeeEEEEEcC------CCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCc
Q 038671 436 NDFDDEHCIGKGGQGSVYKAELP------SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARH 509 (707)
Q Consensus 436 ~~~~~~~~lg~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 509 (707)
++|.+.+.||+|+||.||+|++. +++.||||++... .....++|.+|++++++++|||||++++++.+++.
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~ 89 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP 89 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC---ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCE
Confidence 56888899999999999999653 4788999999753 23356789999999999999999999999999999
Q ss_pred eeEEEeeeccCcHHHHHhccc----------ccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCC
Q 038671 510 SFIVYEYLEMGSLAMILSNDA----------AAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENE 579 (707)
Q Consensus 510 ~~lv~e~~~~~~L~~~l~~~~----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~ 579 (707)
.++||||+++|+|.++++..+ ....++|.++++++.||++||+|||++ +||||||||+|||++.++.
T Consensus 90 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~ 166 (299)
T 4asz_A 90 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLL 166 (299)
T ss_dssp EEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGC
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCc
Confidence 999999999999999997543 234699999999999999999999999 9999999999999999999
Q ss_pred eEEeccccceecCCCCCC--ccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchhhh
Q 038671 580 AHVSDFGTAKFLKPDSSN--WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNLEI 656 (707)
Q Consensus 580 ~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~ 656 (707)
+||+|||+|+........ .....||+.|||||++.+..|+.++|||||||++|||+| |+.||..... ..
T Consensus 167 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~--------~~ 238 (299)
T 4asz_A 167 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN--------NE 238 (299)
T ss_dssp EEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH--------HH
T ss_pred EEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH--------HH
Confidence 999999999876543222 223468999999999999999999999999999999999 9999974322 11
Q ss_pred hhhhhcCC-CCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 657 ALNEMLDP-RLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 657 ~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
....+... +.+.+. ..+.++.+++.+||+.||++|||++|+.+.|+
T Consensus 239 ~~~~i~~~~~~~~p~----~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~ 285 (299)
T 4asz_A 239 VIECITQGRVLQRPR----TCPQEVYELMLGCWQREPHMRKNIKGIHTLLQ 285 (299)
T ss_dssp HHHHHHHTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHcCCCCCCCc----cchHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 12222222 222222 23456899999999999999999999998875
No 4
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.4e-52 Score=421.58 Aligned_cols=254 Identities=22% Similarity=0.356 Sum_probs=208.7
Q ss_pred cCCCCCceeeecCCeeEEEEEc------CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCc
Q 038671 436 NDFDDEHCIGKGGQGSVYKAEL------PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARH 509 (707)
Q Consensus 436 ~~~~~~~~lg~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 509 (707)
.++++.+.||+|+||+||+|++ .+++.||||++..... ....++|.+|+.++++++|||||+++|++.+++.
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~--~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~ 103 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE--GPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQP 103 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CC--C-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccC--hHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCE
Confidence 3466778999999999999975 3568899999975432 2345789999999999999999999999999999
Q ss_pred eeEEEeeeccCcHHHHHhcccc-------------cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecC
Q 038671 510 SFIVYEYLEMGSLAMILSNDAA-------------AKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDL 576 (707)
Q Consensus 510 ~~lv~e~~~~~~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~ 576 (707)
.++||||+++|+|.+++..... ...++|..+++++.|||+||+|||++ +||||||||+|||+++
T Consensus 104 ~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~ 180 (308)
T 4gt4_A 104 LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYD 180 (308)
T ss_dssp CEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECG
T ss_pred EEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECC
Confidence 9999999999999999965422 24589999999999999999999999 9999999999999999
Q ss_pred CCCeEEeccccceecCCCC--CCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccch
Q 038671 577 ENEAHVSDFGTAKFLKPDS--SNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSN 653 (707)
Q Consensus 577 ~~~~kl~Dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~ 653 (707)
++.+||+|||+++...... .......||+.|||||++.+..|+.++|||||||++|||+| |+.||.....
T Consensus 181 ~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~------- 253 (308)
T 4gt4_A 181 KLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN------- 253 (308)
T ss_dssp GGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH-------
T ss_pred CCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH-------
Confidence 9999999999998764332 22345679999999999999999999999999999999998 8999974322
Q ss_pred hhhhhhhhcCC-CCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 654 LEIALNEMLDP-RLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 654 ~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
......+... +.+.+. +.+.++.+++.+||+.||++||||+||++.|+
T Consensus 254 -~~~~~~i~~~~~~~~p~----~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~ 302 (308)
T 4gt4_A 254 -QDVVEMIRNRQVLPCPD----DCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 302 (308)
T ss_dssp -HHHHHHHHTTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -HHHHHHHHcCCCCCCcc----cchHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 1122222222 233332 23456899999999999999999999999885
No 5
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=4.8e-53 Score=422.72 Aligned_cols=249 Identities=21% Similarity=0.319 Sum_probs=210.4
Q ss_pred cCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEEE
Q 038671 436 NDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVY 514 (707)
Q Consensus 436 ~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 514 (707)
++|++.+.||+|+||+||+|+ ..+|+.||+|++...........+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 579999999999999999995 5679999999986532223334577999999999999999999999999999999999
Q ss_pred eeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCC
Q 038671 515 EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPD 594 (707)
Q Consensus 515 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 594 (707)
||++||+|.+++... +.+++..++.++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+|+.+...
T Consensus 112 Ey~~gG~L~~~i~~~---~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~ 185 (311)
T 4aw0_A 112 SYAKNGELLKYIRKI---GSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185 (311)
T ss_dssp CCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred ecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCC
Confidence 999999999999643 4599999999999999999999999 9999999999999999999999999999987644
Q ss_pred C--CCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCcc
Q 038671 595 S--SNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHN 672 (707)
Q Consensus 595 ~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (707)
. ......+||+.|||||++.+..|+.++||||+||++|||+||+.||...+ .......+....+..+..
T Consensus 186 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--------~~~~~~~i~~~~~~~p~~- 256 (311)
T 4aw0_A 186 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN--------EGLIFAKIIKLEYDFPEK- 256 (311)
T ss_dssp TTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHTCCCCCTT-
T ss_pred CCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHcCCCCCCcc-
Confidence 3 33456789999999999999999999999999999999999999996321 222233333333333322
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 038671 673 VQDKLISIMEVAISCLDESPESRPTIQKVS 702 (707)
Q Consensus 673 ~~~~~~~l~~li~~cl~~~P~~Rps~~~l~ 702 (707)
.+.++.+++.+|+..||++|||++|+.
T Consensus 257 ---~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 257 ---FFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp ---CCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred ---cCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 234588999999999999999999863
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=3.1e-52 Score=423.42 Aligned_cols=249 Identities=27% Similarity=0.416 Sum_probs=210.3
Q ss_pred cCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEEE
Q 038671 436 NDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVY 514 (707)
Q Consensus 436 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 514 (707)
..|+..+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|+++++.++|||||++++++.+++.+|+||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~---~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivm 150 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 150 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC---SSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch---hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 5699999999999999999954 5799999999864322 22356889999999999999999999999999999999
Q ss_pred eeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCC
Q 038671 515 EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPD 594 (707)
Q Consensus 515 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 594 (707)
||++||+|.+++.. ..+++..++.++.||+.||+|||++ |||||||||+|||++.+|.+||+|||+|+.....
T Consensus 151 Ey~~gg~L~~~l~~----~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 223 (346)
T 4fih_A 151 EFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 223 (346)
T ss_dssp CCCTTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSS
T ss_pred eCCCCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCC
Confidence 99999999999864 3589999999999999999999999 9999999999999999999999999999988766
Q ss_pred CCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCcchH
Q 038671 595 SSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHNVQ 674 (707)
Q Consensus 595 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (707)
.......+||+.|||||++.+..|+.++||||+||++|||++|+.||..... ......+.....+..+ ...
T Consensus 224 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-----~~~~~~i~~~~~~~~~----~~~ 294 (346)
T 4fih_A 224 VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-----LKAMKMIRDNLPPRLK----NLH 294 (346)
T ss_dssp SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-----HHHHHHHHHSSCCCCS----CGG
T ss_pred CCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-----HHHHHHHHcCCCCCCC----ccc
Confidence 6666778999999999999999999999999999999999999999964221 1111112222222222 223
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 675 DKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 675 ~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
..+.++.+++.+||..||++|||++|+++
T Consensus 295 ~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 295 KVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 34556899999999999999999999976
No 7
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=5.4e-52 Score=423.09 Aligned_cols=254 Identities=26% Similarity=0.445 Sum_probs=202.6
Q ss_pred cCCCCCceeeecCCeeEEEEEcC------CCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCc
Q 038671 436 NDFDDEHCIGKGGQGSVYKAELP------SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARH 509 (707)
Q Consensus 436 ~~~~~~~~lg~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 509 (707)
++|.+.+.||+|+||.||+|+++ +++.||||++... .....++|.+|++++++++|||||+++++|.+++.
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~ 117 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRP 117 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC---SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence 45677889999999999999753 4788999999753 23356789999999999999999999999999999
Q ss_pred eeEEEeeeccCcHHHHHhcccc------------cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCC
Q 038671 510 SFIVYEYLEMGSLAMILSNDAA------------AKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLE 577 (707)
Q Consensus 510 ~~lv~e~~~~~~L~~~l~~~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~ 577 (707)
.++||||+++|+|.++++.... ..+++|.++++++.||++||+|||++ +||||||||+|||++.+
T Consensus 118 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~ 194 (329)
T 4aoj_A 118 LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQG 194 (329)
T ss_dssp EEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETT
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCC
Confidence 9999999999999999976432 24589999999999999999999999 99999999999999999
Q ss_pred CCeEEeccccceecCCCCC--CccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchh
Q 038671 578 NEAHVSDFGTAKFLKPDSS--NWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNL 654 (707)
Q Consensus 578 ~~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~ 654 (707)
+.+||+|||+++....... ......||+.|||||++.+..|+.++|||||||++|||+| |+.||...... . .
T Consensus 195 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~----~-~ 269 (329)
T 4aoj_A 195 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT----E-A 269 (329)
T ss_dssp TEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH----H-H
T ss_pred CcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH----H-H
Confidence 9999999999987654322 2234679999999999999999999999999999999999 99999743221 1 1
Q ss_pred hhhhhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 655 EIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
...+.. ..+++.+.. .+.++.+++.+||+.||++|||++||++.|+
T Consensus 270 ~~~i~~--g~~~~~p~~----~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~ 315 (329)
T 4aoj_A 270 IDCITQ--GRELERPRA----CPPEVYAIMRGCWQREPQQRHSIKDVHARLQ 315 (329)
T ss_dssp HHHHHH--TCCCCCCTT----CCHHHHHHHHHHCCSSTTTSCCHHHHHHHHH
T ss_pred HHHHHc--CCCCCCccc----ccHHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 111111 122333322 3456899999999999999999999999875
No 8
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=6.3e-52 Score=409.30 Aligned_cols=248 Identities=22% Similarity=0.331 Sum_probs=193.4
Q ss_pred cCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEEE
Q 038671 436 NDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVY 514 (707)
Q Consensus 436 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 514 (707)
++|++.+.||+|+||+||+|+. .+|+.||+|++.............+.+|++++++++|||||++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 6899999999999999999964 579999999997655444445677999999999999999999999999999999999
Q ss_pred eeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCC
Q 038671 515 EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPD 594 (707)
Q Consensus 515 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 594 (707)
||+ +|+|.+++... ..+++..++.++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+|+.....
T Consensus 93 Ey~-~g~L~~~l~~~---~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~ 165 (275)
T 3hyh_A 93 EYA-GNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp ECC-CEEHHHHHHHS---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred eCC-CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCC
Confidence 999 67898888643 4599999999999999999999999 9999999999999999999999999999876533
Q ss_pred CCCccccccccCCCCccccccCCC-CccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCcch
Q 038671 595 SSNWAELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHNV 673 (707)
Q Consensus 595 ~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (707)
......+||+.|||||++.+..+ +.++||||+||++|+|+||+.||... ........+.....+.+..
T Consensus 166 -~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~--------~~~~~~~~i~~~~~~~p~~-- 234 (275)
T 3hyh_A 166 -NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE--------SIPVLFKNISNGVYTLPKF-- 234 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHTCCCCCTT--
T ss_pred -CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCC--------CHHHHHHHHHcCCCCCCCC--
Confidence 33455789999999999998886 57999999999999999999999632 1222233333333333222
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 674 QDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 674 ~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
.+.++.+++.+||+.||++|||++|+++
T Consensus 235 --~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 235 --LSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp --SCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred --CCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 2345889999999999999999999986
No 9
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=6.1e-51 Score=424.17 Aligned_cols=249 Identities=27% Similarity=0.400 Sum_probs=210.8
Q ss_pred cCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEEE
Q 038671 436 NDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVY 514 (707)
Q Consensus 436 ~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 514 (707)
+.|+..+.||+|+||.||+|+ ..+|+.||||++...... ..+.+.+|+.+++.++|||||++++++.+++.+|+||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVm 227 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 227 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS---SGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchh---HHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEE
Confidence 569999999999999999995 457999999999754322 2356889999999999999999999999999999999
Q ss_pred eeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCC
Q 038671 515 EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPD 594 (707)
Q Consensus 515 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 594 (707)
|||+||+|.++++. ..+++..+..++.||+.||+|||++ |||||||||+|||++.+|.+||+|||+|+.+...
T Consensus 228 Ey~~gG~L~~~i~~----~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~ 300 (423)
T 4fie_A 228 EFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 300 (423)
T ss_dssp ECCTTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSS
T ss_pred eCCCCCcHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCC
Confidence 99999999999863 3489999999999999999999999 9999999999999999999999999999988766
Q ss_pred CCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCcchH
Q 038671 595 SSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHNVQ 674 (707)
Q Consensus 595 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (707)
.......+||+.|||||++.+..|+.++|||||||++|||++|+.||..... ......+.....+.+....
T Consensus 301 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-----~~~~~~i~~~~~~~~~~~~---- 371 (423)
T 4fie_A 301 VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-----LKAMKMIRDNLPPRLKNLH---- 371 (423)
T ss_dssp CCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-----HHHHHHHHHSCCCCCSCTT----
T ss_pred CccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-----HHHHHHHHcCCCCCCcccc----
Confidence 6666778999999999999999999999999999999999999999964221 1111122222222332222
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 675 DKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 675 ~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
..+.++.+++.+||..||++|||++|+++
T Consensus 372 ~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 372 KVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp SSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 23456889999999999999999999986
No 10
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=8.1e-51 Score=405.17 Aligned_cols=246 Identities=23% Similarity=0.361 Sum_probs=199.0
Q ss_pred CCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeec----CCceeEE
Q 038671 439 DDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSH----ARHSFIV 513 (707)
Q Consensus 439 ~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv 513 (707)
+..+.||+|+||+||+|. ..+++.||+|++...... ....+.|.+|++++++++|||||++++++.. ++.+|+|
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv 107 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT-KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence 566789999999999995 457899999998654332 2345779999999999999999999999864 3568999
Q ss_pred EeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCC--eEecCCCCCCeeec-CCCCeEEecccccee
Q 038671 514 YEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPP--IVHRDISSKNVLLD-LENEAHVSDFGTAKF 590 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~Nil~~-~~~~~kl~Dfg~~~~ 590 (707)
|||++||+|.+++.+. ..+++..++.++.||+.||+|||++ + ||||||||+|||++ .++.+||+|||+|+.
T Consensus 108 mEy~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~ylH~~---~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~ 181 (290)
T 3fpq_A 108 TELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCEEecccChhheeEECCCCCEEEEeCcCCEe
Confidence 9999999999999643 4589999999999999999999998 6 99999999999997 479999999999975
Q ss_pred cCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCC
Q 038671 591 LKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPS 670 (707)
Q Consensus 591 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (707)
.. .......+||+.|||||++.+ +|+.++|||||||++|||+||+.||..... .......+.....+.
T Consensus 182 ~~--~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~-------~~~~~~~i~~~~~~~-- 249 (290)
T 3fpq_A 182 KR--ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN-------AAQIYRRVTSGVKPA-- 249 (290)
T ss_dssp CC--TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-------HHHHHHHHTTTCCCG--
T ss_pred CC--CCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc-------HHHHHHHHHcCCCCC--
Confidence 43 234456789999999998865 699999999999999999999999963221 122222222222221
Q ss_pred cchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 671 HNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 671 ~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
......+.++.+++.+||+.||++|||++|+++
T Consensus 250 ~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 250 SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 111122345889999999999999999999986
No 11
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.1e-51 Score=413.24 Aligned_cols=249 Identities=22% Similarity=0.301 Sum_probs=200.4
Q ss_pred cCCCCCceeeecCCeeEEEEEc----CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCcee
Q 038671 436 NDFDDEHCIGKGGQGSVYKAEL----PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSF 511 (707)
Q Consensus 436 ~~~~~~~~lg~G~~g~vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 511 (707)
++|++.+.||+|+||+||+|+. .+++.||+|++....... .....+.+|++++++++|||||++++++.+++..|
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 102 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKV-RDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLY 102 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEE-EECC------CCCCCCCCTTEECEEEEEEETTEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcCh-HHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence 5799999999999999999964 357899999987543222 12346788999999999999999999999999999
Q ss_pred EEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceec
Q 038671 512 IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFL 591 (707)
Q Consensus 512 lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~ 591 (707)
+||||++||+|.+++.+. +.+++..++.++.||+.||+|||++ ||+||||||+|||++.+|.+||+|||+|+..
T Consensus 103 ivmEy~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 103 LILDFLRGGDLFTRLSKE---VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EEECCCTTCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEEcCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 999999999999999653 4599999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCc
Q 038671 592 KPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSH 671 (707)
Q Consensus 592 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (707)
..........+||+.|||||++.+..|+.++||||+||++|||+||+.||...+ .......+.....+.+..
T Consensus 177 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~--------~~~~~~~i~~~~~~~p~~ 248 (304)
T 3ubd_A 177 IDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD--------RKETMTMILKAKLGMPQF 248 (304)
T ss_dssp ----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCCCCCCTT
T ss_pred cCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcC--------HHHHHHHHHcCCCCCCCc
Confidence 655555567799999999999999999999999999999999999999996322 222233333333333322
Q ss_pred chHHHHHHHHHHHHhccCCCCCCCCCH-----HHHHH
Q 038671 672 NVQDKLISIMEVAISCLDESPESRPTI-----QKVSQ 703 (707)
Q Consensus 672 ~~~~~~~~l~~li~~cl~~~P~~Rps~-----~~l~~ 703 (707)
.+.++.+++.+||+.||++|||+ +|+++
T Consensus 249 ----~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 249 ----LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp ----SCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred ----CCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 33458899999999999999984 57664
No 12
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=8.1e-51 Score=411.87 Aligned_cols=247 Identities=23% Similarity=0.307 Sum_probs=200.6
Q ss_pred cCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEEE
Q 038671 436 NDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVY 514 (707)
Q Consensus 436 ~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 514 (707)
+.|+..++||+|+||.||+|+ ..+|+.||||++..... ..+|+.++++++|||||++++++.+++.+|+||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~--------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivm 129 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF--------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFM 129 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh--------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 457788899999999999995 45799999999875422 236999999999999999999999999999999
Q ss_pred eeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCC-CeEEeccccceecCC
Q 038671 515 EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLEN-EAHVSDFGTAKFLKP 593 (707)
Q Consensus 515 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~-~~kl~Dfg~~~~~~~ 593 (707)
||++||+|.++++.. +.+++..++.++.||+.||+|||++ +||||||||+|||++.+| .+||+|||+|+....
T Consensus 130 Ey~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~ 203 (336)
T 4g3f_A 130 ELLEGGSLGQLIKQM---GCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQP 203 (336)
T ss_dssp CCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC--
T ss_pred eccCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccC
Confidence 999999999999653 4599999999999999999999999 999999999999999988 699999999988754
Q ss_pred CCCC-----ccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCC
Q 038671 594 DSSN-----WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPT 668 (707)
Q Consensus 594 ~~~~-----~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (707)
.... ....+||+.|||||++.+..|+.++||||+||++|||+||+.||...... ......... ..+.
T Consensus 204 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~----~~~~~i~~~----~~~~ 275 (336)
T 4g3f_A 204 DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG----PLCLKIASE----PPPI 275 (336)
T ss_dssp ----------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCS----CCHHHHHHS----CCGG
T ss_pred CCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH----HHHHHHHcC----CCCc
Confidence 3221 23357999999999999999999999999999999999999999643221 111111111 1110
Q ss_pred CCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 038671 669 PSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLL 705 (707)
Q Consensus 669 ~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L 705 (707)
....+..+..+.+++.+||+.||++|||+.|+++.|
T Consensus 276 -~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l 311 (336)
T 4g3f_A 276 -REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKV 311 (336)
T ss_dssp -GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred -hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHH
Confidence 011123345688999999999999999999998865
No 13
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=4.2e-50 Score=412.30 Aligned_cols=263 Identities=23% Similarity=0.380 Sum_probs=212.2
Q ss_pred HHHHHHhcCCCCCceeeecCCeeEEEEEcC------CCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCC-Cceeeee
Q 038671 429 EEIIRVTNDFDDEHCIGKGGQGSVYKAELP------SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH-RNIVKFY 501 (707)
Q Consensus 429 ~~~~~~~~~~~~~~~lg~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~~~ 501 (707)
.+++...++|++.+.||+|+||.||+|++. .++.||||++..... ....+++.+|++++.+++| ||||+++
T Consensus 57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~--~~~~~~~~~E~~il~~l~hhpnIV~l~ 134 (353)
T 4ase_A 57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVNLL 134 (353)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCC--HHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccC--hHHHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 344445678999999999999999999643 246899999876433 2345779999999999965 9999999
Q ss_pred eeeecC-CceeEEEeeeccCcHHHHHhcccc-------------cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCC
Q 038671 502 GFCSHA-RHSFIVYEYLEMGSLAMILSNDAA-------------AKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDI 567 (707)
Q Consensus 502 ~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl 567 (707)
++|.+. +..++|||||++|+|.++++.... ...+++.+++.++.|||+||+|||++ +||||||
T Consensus 135 g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDL 211 (353)
T 4ase_A 135 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDL 211 (353)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred EEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCcc
Confidence 999664 568999999999999999975432 23489999999999999999999999 9999999
Q ss_pred CCCCeeecCCCCeEEeccccceecCCCCCC--ccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcc
Q 038671 568 SSKNVLLDLENEAHVSDFGTAKFLKPDSSN--WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFI 644 (707)
Q Consensus 568 k~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~ 644 (707)
||+|||+++++.+||+|||+|+........ .....||+.|||||++.+..|+.++|||||||++|||+| |+.||...
T Consensus 212 K~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~ 291 (353)
T 4ase_A 212 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 291 (353)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred CccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999999876544332 234678999999999999999999999999999999998 99999743
Q ss_pred cccccccchhhhhhhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 645 SSISSSSSNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
.. .......+.... +++.+.. .+.++.+++.+||+.||++|||++|+++.|+
T Consensus 292 ~~----~~~~~~~i~~g~--~~~~p~~----~~~~~~~li~~c~~~dP~~RPt~~eil~~L~ 343 (353)
T 4ase_A 292 KI----DEEFCRRLKEGT--RMRAPDY----TTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 343 (353)
T ss_dssp CC----SHHHHHHHHHTC--CCCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CH----HHHHHHHHHcCC--CCCCCcc----CCHHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 21 122222232222 2232322 2345889999999999999999999999874
No 14
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.4e-49 Score=400.53 Aligned_cols=251 Identities=20% Similarity=0.397 Sum_probs=195.3
Q ss_pred hcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCC-----
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHAR----- 508 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----- 508 (707)
.++|++.+.||+|+||+||+|+ ..+|+.||||++.... .....+.+.+|++++++++|||||++++++.+.+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~ 81 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKL 81 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-----
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccc
Confidence 3469999999999999999995 4579999999986543 2334567899999999999999999999986543
Q ss_pred -------ceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeE
Q 038671 509 -------HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAH 581 (707)
Q Consensus 509 -------~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~k 581 (707)
..|+||||+++|+|.+++.........++..++.++.||+.||+|||++ ||+||||||+|||++.++.+|
T Consensus 82 ~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vK 158 (299)
T 4g31_A 82 QPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVK 158 (299)
T ss_dssp -----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEE
T ss_pred cccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEE
Confidence 3689999999999999998665555567778899999999999999999 999999999999999999999
Q ss_pred EeccccceecCCCCC------------CccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccc
Q 038671 582 VSDFGTAKFLKPDSS------------NWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISS 649 (707)
Q Consensus 582 l~Dfg~~~~~~~~~~------------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~ 649 (707)
|+|||+|+....... .....+||+.|||||++.+..|+.++|||||||++|||++ ||...
T Consensus 159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~----- 230 (299)
T 4g31_A 159 VGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQ----- 230 (299)
T ss_dssp ECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSH-----
T ss_pred EccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCc-----
Confidence 999999987654321 1234579999999999999999999999999999999996 76421
Q ss_pred ccchhhhhhhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 650 SSSNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
...............+. ..........+++.+||+.||++|||+.|+++
T Consensus 231 --~~~~~~~~~~~~~~~p~---~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 231 --MERVRTLTDVRNLKFPP---LFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp --HHHHHHHHHHHTTCCCH---HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --cHHHHHHHHHhcCCCCC---CCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11122223333333332 23344456788999999999999999999986
No 15
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.5e-49 Score=401.13 Aligned_cols=261 Identities=23% Similarity=0.331 Sum_probs=199.4
Q ss_pred cCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCC----cee
Q 038671 436 NDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHAR----HSF 511 (707)
Q Consensus 436 ~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~~~ 511 (707)
++|.+.+.||+|+||+||+|++ +|+.||||++... .........|+..+.+++|||||++++++.+++ .++
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~----~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~ 77 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECcc----chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEE
Confidence 5678889999999999999987 5899999998542 112223345667777899999999999997654 579
Q ss_pred EEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCC-----CCCeEecCCCCCCeeecCCCCeEEeccc
Q 038671 512 IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDC-----FPPIVHRDISSKNVLLDLENEAHVSDFG 586 (707)
Q Consensus 512 lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----~~~ivH~dlk~~Nil~~~~~~~kl~Dfg 586 (707)
+||||+++|+|.++++. .+++|..+.+++.|+++||+|||+++ .++||||||||+|||++.++.+||+|||
T Consensus 78 lV~Ey~~~gsL~~~l~~----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFG 153 (303)
T 3hmm_A 78 LVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 153 (303)
T ss_dssp EEEECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCT
T ss_pred EEecCCCCCcHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCC
Confidence 99999999999999964 35899999999999999999999762 3489999999999999999999999999
Q ss_pred cceecCCCCCC----ccccccccCCCCccccccC------CCCccchhHHHHHHHHHHHhCCCCCCcccccc-------c
Q 038671 587 TAKFLKPDSSN----WAELAGTYGYVAPELAYTM------KVTEKCDVYSFGVLALEVIKGKHPRDFISSIS-------S 649 (707)
Q Consensus 587 ~~~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~-------~ 649 (707)
+|+........ ....+||+.|||||++.+. .++.++|||||||++|||+||+.||....... .
T Consensus 154 la~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~ 233 (303)
T 3hmm_A 154 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP 233 (303)
T ss_dssp TCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSC
T ss_pred CCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccc
Confidence 99876544322 2345799999999998764 36789999999999999999988875322111 1
Q ss_pred ccchhhhhhh----hhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 650 SSSNLEIALN----EMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 650 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
.....+.... ...++.+|... ...+.+..+.+++.+||+.||++||||.||++.|+
T Consensus 234 ~~~~~~~~~~~~~~~~~rp~~p~~~-~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 293 (303)
T 3hmm_A 234 SDPSVEEMRKVVCEQKLRPNIPNRW-QSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 293 (303)
T ss_dssp SSCCHHHHHHHHTTSCCCCCCCGGG-GSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHH
T ss_pred ccchHHHHHHHHhcccCCCCCCccc-cchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHH
Confidence 1111222222 22233333221 12345667899999999999999999999999874
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.4e-46 Score=391.38 Aligned_cols=257 Identities=23% Similarity=0.350 Sum_probs=200.5
Q ss_pred hcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeec------C
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSH------A 507 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~ 507 (707)
.++|++.+.||+|+||+||+|+ ..+|+.||||++....... ...+.+.+|++++++++|||||++++++.. .
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 131 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVV-TNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEF 131 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSH-HHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccch-HHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccC
Confidence 3579999999999999999995 5679999999997654332 345678899999999999999999998753 4
Q ss_pred CceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEecccc
Q 038671 508 RHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGT 587 (707)
Q Consensus 508 ~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~ 587 (707)
+..|+||||++ |+|.+++... +.+++..+..++.||+.||+|||++ |||||||||+|||++.++.+||+|||+
T Consensus 132 ~~~~ivmE~~~-g~L~~~i~~~---~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGl 204 (398)
T 4b99_A 132 KSVYVVLDLME-SDLHQIIHSS---QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGM 204 (398)
T ss_dssp CCEEEEEECCS-EEHHHHHTSS---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEEeCCC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecce
Confidence 67899999996 6798888643 4699999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCC----CCCccccccccCCCCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhh--
Q 038671 588 AKFLKPD----SSNWAELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNE-- 660 (707)
Q Consensus 588 ~~~~~~~----~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~-- 660 (707)
|+.+... .......+||+.|||||++.+.. ++.++||||+||++|||++|++||...+... ........
T Consensus 205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~----~l~~I~~~~g 280 (398)
T 4b99_A 205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVH----QLQLIMMVLG 280 (398)
T ss_dssp CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHH----HHHHHHHHHC
T ss_pred eeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHH----HHHHHHHhcC
Confidence 9876432 22345678999999999988754 6999999999999999999999996432211 00000000
Q ss_pred --------------------hcCCCCCCCCc-chHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 661 --------------------MLDPRLPTPSH-NVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 661 --------------------~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
...+..+.+.. ..+..+.++.+++.+||..||++|||++|+++
T Consensus 281 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 281 TPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp CCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 00111111100 00112346889999999999999999999986
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.5e-45 Score=381.47 Aligned_cols=200 Identities=29% Similarity=0.362 Sum_probs=171.7
Q ss_pred HHHHHHhcCCCCCceeeecCCeeEEEEEc----CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcC-CCCceeeeeee
Q 038671 429 EEIIRVTNDFDDEHCIGKGGQGSVYKAEL----PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGF 503 (707)
Q Consensus 429 ~~~~~~~~~~~~~~~lg~G~~g~vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~ 503 (707)
+.+....++|++.+.||+|+||+||+|+. .+++.||+|++.... ...++.+|+++++.+ +||||++++++
T Consensus 14 ~~~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-----~~~~~~~E~~~l~~~~~h~nIv~l~~~ 88 (361)
T 4f9c_A 14 EAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-----HPIRIAAELQCLTVAGGQDNVMGVKYC 88 (361)
T ss_dssp HHSGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-----CHHHHHHHHHHHHHTCSBTTBCCCSEE
T ss_pred HhcCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-----CHHHHHHHHHHHHHhcCCCCCceEEEE
Confidence 34445678999999999999999999954 357889999986532 234678899999988 69999999999
Q ss_pred eecCCceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCC-CCeEE
Q 038671 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLE-NEAHV 582 (707)
Q Consensus 504 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~-~~~kl 582 (707)
+.+.+..|+||||++||+|.+++. .+++.+++.++.||+.||+|||++ ||+||||||+|||++.+ +.+||
T Consensus 89 ~~~~~~~~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl 159 (361)
T 4f9c_A 89 FRKNDHVVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYAL 159 (361)
T ss_dssp EEETTEEEEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEE
T ss_pred EEECCEEEEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEE
Confidence 999999999999999999999983 389999999999999999999999 99999999999999877 79999
Q ss_pred eccccceecCCCCC----------------------------CccccccccCCCCccccccCC-CCccchhHHHHHHHHH
Q 038671 583 SDFGTAKFLKPDSS----------------------------NWAELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALE 633 (707)
Q Consensus 583 ~Dfg~~~~~~~~~~----------------------------~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~e 633 (707)
+|||+|+....... .....+||+.|+|||++.+.. |+.++||||+||++||
T Consensus 160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~e 239 (361)
T 4f9c_A 160 VDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLS 239 (361)
T ss_dssp CCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHH
T ss_pred CcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHH
Confidence 99999986543211 123457999999999988754 8999999999999999
Q ss_pred HHhCCCCCC
Q 038671 634 VIKGKHPRD 642 (707)
Q Consensus 634 l~tg~~p~~ 642 (707)
|++|+.||.
T Consensus 240 ll~G~~Pf~ 248 (361)
T 4f9c_A 240 LLSGRYPFY 248 (361)
T ss_dssp HHHTCSSSS
T ss_pred HHHCCCCCC
Confidence 999999985
No 18
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.3e-45 Score=400.90 Aligned_cols=252 Identities=21% Similarity=0.235 Sum_probs=201.4
Q ss_pred hcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHH---HHHHHHHHhcCCCCceeeeeeeeecCCce
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQE---FLNEVKTLTGIRHRNIVKFYGFCSHARHS 510 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~---~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 510 (707)
-++|++.+.||+|+||.||+|+ ..+|+.||+|++............. ...++.+++.++|||||++++++.+++.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 3679999999999999999995 4579999999986432111112222 33456777888999999999999999999
Q ss_pred eEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEecccccee
Q 038671 511 FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKF 590 (707)
Q Consensus 511 ~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~ 590 (707)
|+||||+.||+|.+++.+. ..+++..++.++.||+.||+|||++ |||||||||+|||++.+|.+||+|||+|+.
T Consensus 268 ylVmEy~~GGdL~~~l~~~---~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~ 341 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQH---GVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 341 (689)
T ss_dssp EEEECCCCSCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeee
Confidence 9999999999999999653 4599999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCccccccccCCCCccccc-cCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCC
Q 038671 591 LKPDSSNWAELAGTYGYVAPELAY-TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTP 669 (707)
Q Consensus 591 ~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (707)
..... ....+||+.|||||++. +..|+.++|+||+||++|||++|++||..... .................+
T Consensus 342 ~~~~~--~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~-----~~~~~i~~~i~~~~~~~p 414 (689)
T 3v5w_A 342 FSKKK--PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT-----KDKHEIDRMTLTMAVELP 414 (689)
T ss_dssp CSSCC--CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGC-----CCHHHHHHHHHHCCCCCC
T ss_pred cCCCC--CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHhhcCCCCCCC
Confidence 65432 34578999999999986 45799999999999999999999999964221 111222222222233222
Q ss_pred CcchHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHH
Q 038671 670 SHNVQDKLISIMEVAISCLDESPESRPT-----IQKVSQ 703 (707)
Q Consensus 670 ~~~~~~~~~~l~~li~~cl~~~P~~Rps-----~~~l~~ 703 (707)
.. .+.++.++|.+||..||.+|++ ++|+++
T Consensus 415 ~~----~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 415 DS----FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp TT----SCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred cc----CCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 22 3345889999999999999998 677754
No 19
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.6e-44 Score=415.69 Aligned_cols=360 Identities=33% Similarity=0.525 Sum_probs=290.4
Q ss_pred CCCCceeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcC-ccCCCCCcEEEcccCcCcccCCccccCCC-CCCe
Q 038671 2 LSNLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHS-LGNLTQITFLTLFDNALSGAIPKEYGNLV-KLTL 79 (707)
Q Consensus 2 l~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~-~~~l~~L~~L~L~~n~i~~~~~~~~~~l~-~L~~ 79 (707)
+++|++|+|++|.+++..|..|+.+++|++|+|++|++++.+|.. |.++++|++|+|++|.+++.+|..+.+++ +|++
T Consensus 293 ~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~ 372 (768)
T 3rgz_A 293 CDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLT 372 (768)
T ss_dssp CTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSE
T ss_pred cCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcE
Confidence 367888888888888777888888888888888888777666654 77777777777777777766666666554 4555
Q ss_pred eecccc--------------------------cccc-cCCCCCCCCCccEEEeccCccccccCccccCCCCCcEEEcccc
Q 038671 80 LTLENN--------------------------QLRG-PIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHN 132 (707)
Q Consensus 80 L~l~~n--------------------------~i~~-~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n 132 (707)
|++++| .+.+ ++..+..+++|++|++++|++++..+..+..+++|+.|++++|
T Consensus 373 L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n 452 (768)
T 3rgz_A 373 LDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLN 452 (768)
T ss_dssp EECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred EEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCC
Confidence 555554 4443 2234666677777777777777666677777777777777777
Q ss_pred cccccCCCCCCCCCCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCcc
Q 038671 133 YFYGEISSDWGRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSL 212 (707)
Q Consensus 133 ~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 212 (707)
.+++..+..+..+++|++|+|++|.+++..+..+..+++|++|+|++|++++.+|..+..+++|++|++++|++++..|.
T Consensus 453 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 532 (768)
T 3rgz_A 453 MLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPA 532 (768)
T ss_dssp CCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCG
T ss_pred cccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCH
Confidence 77777777777778888888888888877788888888888888888888888888888888888888888888888888
Q ss_pred ccCCCCcccEEEccCCccCCCCCcc-------------------------------------------------------
Q 038671 213 ELGSLTQLERLDLSSNRLSNSIPKS------------------------------------------------------- 237 (707)
Q Consensus 213 ~~~~l~~L~~L~l~~n~i~~~~~~~------------------------------------------------------- 237 (707)
.+..+++|++|++++|.+++.+|..
T Consensus 533 ~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 612 (768)
T 3rgz_A 533 ELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNP 612 (768)
T ss_dssp GGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCC
T ss_pred HHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccc
Confidence 8888888888888888887655543
Q ss_pred ---------------ccCcccCceEeeecccccccCchhhhhcccCCeeeecCccCCCCCCcccccccccceEecccccc
Q 038671 238 ---------------LGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNL 302 (707)
Q Consensus 238 ---------------l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i 302 (707)
+..+++|+.|+|++|++++..|..++.+++|+.|+|++|.+++.+|..++.+++|+.|++++|++
T Consensus 613 ~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l 692 (768)
T 3rgz_A 613 CNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKL 692 (768)
T ss_dssp SCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCC
T ss_pred cccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcc
Confidence 33456788999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhHhhccCCCceeEeeccCcccccCCCccccccCchhhcccCcCcCCCCCCCCCcCCC
Q 038671 303 SGFIPSCFEELHGLSYIDISYNELHGSIPNSTAFRDAPMEALQGNKGLCGDIKGFPSCKAS 363 (707)
Q Consensus 303 ~~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~c~~~ 363 (707)
++.+|..+..++.|+.|++++|+++|.+|....+.......+.+|+.+|+.+ .+.|...
T Consensus 693 ~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~--l~~C~~~ 751 (768)
T 3rgz_A 693 DGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP--LPRCDPS 751 (768)
T ss_dssp EECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTT--SCCCCSC
T ss_pred cCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCC--CcCCCCC
Confidence 9999999999999999999999999999998888888899999999999976 3467654
No 20
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=3.5e-45 Score=402.04 Aligned_cols=252 Identities=21% Similarity=0.324 Sum_probs=212.1
Q ss_pred hcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIV 513 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 513 (707)
.++|++.+.||+|+||.||+|. ..+|+.||+|++.... ....+.+.+|+++|+.++|||||++++++.+++.+|+|
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~---~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv 232 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMI 232 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc---hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence 3689999999999999999995 4679999999987542 23456788999999999999999999999999999999
Q ss_pred EeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCC--CCeEEeccccceec
Q 038671 514 YEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLE--NEAHVSDFGTAKFL 591 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~--~~~kl~Dfg~~~~~ 591 (707)
|||++||+|.+++... ...+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.+
T Consensus 233 ~E~~~gg~L~~~i~~~--~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~ 307 (573)
T 3uto_A 233 YEFMSGGELFEKVADE--HNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL 307 (573)
T ss_dssp EECCCCCBHHHHHTCT--TSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEEC
T ss_pred EeecCCCcHHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEc
Confidence 9999999999998543 24589999999999999999999999 99999999999999854 89999999999987
Q ss_pred CCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCc
Q 038671 592 KPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSH 671 (707)
Q Consensus 592 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (707)
... ......+||+.|||||++.+..|+.++||||+||++|||++|+.||.... ....+..+.......+..
T Consensus 308 ~~~-~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~--------~~~~~~~i~~~~~~~~~~ 378 (573)
T 3uto_A 308 DPK-QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN--------DDETLRNVKSCDWNMDDS 378 (573)
T ss_dssp CTT-SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS--------HHHHHHHHHTTCCCCCSG
T ss_pred cCC-CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--------HHHHHHHHHhCCCCCCcc
Confidence 643 33456789999999999999999999999999999999999999996322 223333333333333333
Q ss_pred chHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 672 NVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 672 ~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
.....+.++.+++.+||+.||.+|||++|+++
T Consensus 379 ~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 379 AFSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred cccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 33344566889999999999999999999986
No 21
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.1e-43 Score=363.04 Aligned_cols=262 Identities=30% Similarity=0.436 Sum_probs=204.7
Q ss_pred HHHHHhcCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCc
Q 038671 430 EIIRVTNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARH 509 (707)
Q Consensus 430 ~~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 509 (707)
.+....++|++.+.||+|+||.||+|+. +|+.||||++...... ....+.+.+|++++++++||||+++++++...+.
T Consensus 31 ~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 108 (309)
T 3p86_A 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFH-AERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPN 108 (309)
T ss_dssp -CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCS-HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTC
T ss_pred cccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCc
Confidence 3334467899999999999999999976 5888999998765433 3445678999999999999999999999999999
Q ss_pred eeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCC--eEecCCCCCCeeecCCCCeEEecccc
Q 038671 510 SFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPP--IVHRDISSKNVLLDLENEAHVSDFGT 587 (707)
Q Consensus 510 ~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~Nil~~~~~~~kl~Dfg~ 587 (707)
.++||||+++++|.+++........+++..++.++.|++.||+|||+. | |+||||||+||+++.++.+||+|||+
T Consensus 109 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~ 185 (309)
T 3p86_A 109 LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGL 185 (309)
T ss_dssp CEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC-
T ss_pred eEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCC
Confidence 999999999999999997655445589999999999999999999999 8 99999999999999999999999999
Q ss_pred ceecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCC
Q 038671 588 AKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLP 667 (707)
Q Consensus 588 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (707)
++.............||+.|+|||.+.+..++.++||||||+++|+|++|+.||...... ...... ........
T Consensus 186 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~----~~~~~~--~~~~~~~~ 259 (309)
T 3p86_A 186 SRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA----QVVAAV--GFKCKRLE 259 (309)
T ss_dssp ----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH----HHHHHH--HHSCCCCC
T ss_pred CccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHH--HhcCCCCC
Confidence 986554444445568999999999999999999999999999999999999999643211 111111 11122222
Q ss_pred CCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 668 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
.+. ..+.++.+++.+||+.||++|||++++++.|+
T Consensus 260 ~~~----~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~ 294 (309)
T 3p86_A 260 IPR----NLNPQVAAIIEGCWTNEPWKRPSFATIMDLLR 294 (309)
T ss_dssp CCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCc----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 222 23345899999999999999999999999875
No 22
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=2e-43 Score=365.30 Aligned_cols=278 Identities=32% Similarity=0.599 Sum_probs=225.6
Q ss_pred cchHHHHHHHhcCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeee
Q 038671 425 KIVYEEIIRVTNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFC 504 (707)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~ 504 (707)
.++..++....++|++.+.||+|+||.||+|+.++|+.||+|++....... ....+.+|+++++.++||||+++++++
T Consensus 19 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 19 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQG--GELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp ECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-------CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred eecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCch--HHHHHHHHHHHHHhccCCCccceEEEE
Confidence 456788889999999999999999999999988889999999987643221 223688999999999999999999999
Q ss_pred ecCCceeEEEeeeccCcHHHHHhcccc-cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEe
Q 038671 505 SHARHSFIVYEYLEMGSLAMILSNDAA-AKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVS 583 (707)
Q Consensus 505 ~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~ 583 (707)
..++..++||||+.+++|.+++..... ...+++..++.++.|++.||+|||+.+.+||+||||||+||+++.++.+||+
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~ 176 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEEC
T ss_pred ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEec
Confidence 999999999999999999999976543 3458999999999999999999999876789999999999999999999999
Q ss_pred ccccceecCCCCCC-ccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhh----
Q 038671 584 DFGTAKFLKPDSSN-WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIAL---- 658 (707)
Q Consensus 584 Dfg~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~---- 658 (707)
|||++......... .....||+.|+|||.+.+..++.++||||||+++|+|++|+.||+................
T Consensus 177 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 256 (326)
T 3uim_A 177 DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 256 (326)
T ss_dssp CCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTT
T ss_pred cCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHh
Confidence 99999876544332 3345699999999999888899999999999999999999999963221111111111111
Q ss_pred -----hhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 659 -----NEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 659 -----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
....+.... .......+..+.+++.+||+.||.+|||++|+++.|+
T Consensus 257 ~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~ 307 (326)
T 3uim_A 257 KEKKLEALVDVDLQ--GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307 (326)
T ss_dssp SSCCSTTSSCTTCT--TSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred hchhhhhhcChhhc--cccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhc
Confidence 111222221 2234667788999999999999999999999999985
No 23
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=8.6e-43 Score=354.78 Aligned_cols=250 Identities=24% Similarity=0.445 Sum_probs=209.5
Q ss_pred hcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIV 513 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 513 (707)
.++|++.+.||+|+||.||+|. ..+|+.||+|++..... ...+.+.+|+.+++.++||||+++++++..++..++|
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 95 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC---SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccc---cHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEE
Confidence 5689999999999999999996 46799999999864322 2346788999999999999999999999999999999
Q ss_pred EeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCC
Q 038671 514 YEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKP 593 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~ 593 (707)
|||+++++|.+++... .+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.....
T Consensus 96 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (297)
T 3fxz_A 96 MEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 168 (297)
T ss_dssp EECCTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EECCCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCC
Confidence 9999999999998643 489999999999999999999999 999999999999999999999999999988776
Q ss_pred CCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCcch
Q 038671 594 DSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHNV 673 (707)
Q Consensus 594 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (707)
.........||+.|+|||.+.+..++.++||||||+++|+|++|+.||...... ...........+....+
T Consensus 169 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----~~~~~~~~~~~~~~~~~---- 239 (297)
T 3fxz_A 169 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL-----RALYLIATNGTPELQNP---- 239 (297)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHHHHHHHCSCCCSCG----
T ss_pred cccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHhCCCCCCCCc----
Confidence 655556678999999999999999999999999999999999999999632211 11111111122222222
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 674 QDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 674 ~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
...+..+.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 240 EKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 233456889999999999999999999986
No 24
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=5.2e-43 Score=361.21 Aligned_cols=268 Identities=32% Similarity=0.521 Sum_probs=219.1
Q ss_pred HHHHHhcCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCc
Q 038671 430 EIIRVTNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARH 509 (707)
Q Consensus 430 ~~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 509 (707)
++....++|++.+.||+|+||.||+|..++|+.||+|++..... ...+.+.+|+++++.++||||+++++++.+.+.
T Consensus 33 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 109 (321)
T 2qkw_B 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESS---QGIEEFETEIETLSFCRHPHLVSLIGFCDERNE 109 (321)
T ss_dssp CCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCS---SHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTC
T ss_pred HHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccCh---HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCe
Confidence 44556789999999999999999999988899999999875432 245678999999999999999999999999999
Q ss_pred eeEEEeeeccCcHHHHHhcccc-cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccc
Q 038671 510 SFIVYEYLEMGSLAMILSNDAA-AKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTA 588 (707)
Q Consensus 510 ~~lv~e~~~~~~L~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~ 588 (707)
.++||||+++++|.+++..... ...+++..++.++.|++.||+|||++ |++||||||+||+++.++.+||+|||++
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 186 (321)
T 2qkw_B 110 MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGIS 186 (321)
T ss_dssp CEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTC
T ss_pred EEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeecccc
Confidence 9999999999999999865432 23589999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCC--CccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhh--------hh
Q 038671 589 KFLKPDSS--NWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEI--------AL 658 (707)
Q Consensus 589 ~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~--------~~ 658 (707)
........ ......||+.|+|||.+.+..++.++||||||+++|||++|+.||......... ..... ..
T Consensus 187 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~ 265 (321)
T 2qkw_B 187 KKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMV-NLAEWAVESHNNGQL 265 (321)
T ss_dssp EECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCC-CHHHHTHHHHTTTCC
T ss_pred cccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHH-HHHHHhhhccccccH
Confidence 87543222 223456899999999998889999999999999999999999998643321111 11110 11
Q ss_pred hhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 659 NEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
....++... .....+.+..+.+++.+||+.||++|||+.|+++.|+
T Consensus 266 ~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 311 (321)
T 2qkw_B 266 EQIVDPNLA--DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311 (321)
T ss_dssp CSSSSSSCT--TCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHhcChhhc--cccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 112222222 2234677888999999999999999999999999885
No 25
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=8.3e-43 Score=359.81 Aligned_cols=250 Identities=24% Similarity=0.305 Sum_probs=208.0
Q ss_pred cCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEEE
Q 038671 436 NDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVY 514 (707)
Q Consensus 436 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 514 (707)
++|++.+.||+|+||.||+|+. .+|+.||+|++.............+.+|+++++.++||||+++++++...+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 5789999999999999999965 579999999986432222234567889999999999999999999999999999999
Q ss_pred eeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCC
Q 038671 515 EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPD 594 (707)
Q Consensus 515 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 594 (707)
||++||+|.+++... +.+++..++.++.||+.||+|||++ ||+||||||+||+++.+|.+||+|||+++.....
T Consensus 85 E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 158 (337)
T 1o6l_A 85 EYANGGELFFHLSRE---RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 158 (337)
T ss_dssp ECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred eCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccC
Confidence 999999999998643 4589999999999999999999999 9999999999999999999999999999875544
Q ss_pred CCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCcchH
Q 038671 595 SSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHNVQ 674 (707)
Q Consensus 595 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (707)
.......+||+.|+|||++.+..++.++||||||+++|||++|+.||.... .......+.......+..
T Consensus 159 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--------~~~~~~~i~~~~~~~p~~--- 227 (337)
T 1o6l_A 159 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--------HERLFELILMEEIRFPRT--- 227 (337)
T ss_dssp TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCCCCCCTT---
T ss_pred CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC--------HHHHHHHHHcCCCCCCCC---
Confidence 455566789999999999999999999999999999999999999996321 112222222222222222
Q ss_pred HHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 038671 675 DKLISIMEVAISCLDESPESRP-----TIQKVSQ 703 (707)
Q Consensus 675 ~~~~~l~~li~~cl~~~P~~Rp-----s~~~l~~ 703 (707)
.+.++.+++.+||+.||++|| +++|+++
T Consensus 228 -~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 228 -LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp -SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred -CCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 234588999999999999999 8998875
No 26
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=8.3e-43 Score=358.96 Aligned_cols=251 Identities=24% Similarity=0.351 Sum_probs=209.4
Q ss_pred HhcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeE
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFI 512 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 512 (707)
..++|++.+.||+|+||.||+|++ .+|+.||+|++...... ....+.+.+|+++++.++||||+++++++...+..++
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 91 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLN-PTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYL 91 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEE
Confidence 356899999999999999999964 68999999998654322 2345678899999999999999999999999999999
Q ss_pred EEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecC
Q 038671 513 VYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLK 592 (707)
Q Consensus 513 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~ 592 (707)
||||+++++|.+++... +.+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++....
T Consensus 92 v~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 165 (328)
T 3fe3_A 92 IMEYASGGEVFDYLVAH---GRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFT 165 (328)
T ss_dssp EECCCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred EEECCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence 99999999999998643 4589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCccccccccCCCCccccccCCCC-ccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCc
Q 038671 593 PDSSNWAELAGTYGYVAPELAYTMKVT-EKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSH 671 (707)
Q Consensus 593 ~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (707)
.. ......+||+.|+|||.+.+..+. .++||||+|+++|+|++|+.||+... .......+.......+..
T Consensus 166 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--------~~~~~~~i~~~~~~~p~~ 236 (328)
T 3fe3_A 166 VG-GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN--------LKELRERVLRGKYRIPFY 236 (328)
T ss_dssp SS-CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCCCCCCTT
T ss_pred CC-CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCCCCCCCC
Confidence 43 334556899999999999888775 79999999999999999999996422 222222333333333322
Q ss_pred chHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 672 NVQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 672 ~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
. +.++.+++.+||..||.+|||++|+++.
T Consensus 237 ~----s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 237 M----STDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp S----CHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred C----CHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 2 3458899999999999999999999863
No 27
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.6e-43 Score=361.46 Aligned_cols=252 Identities=23% Similarity=0.363 Sum_probs=200.1
Q ss_pred HHhcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCcee
Q 038671 433 RVTNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSF 511 (707)
Q Consensus 433 ~~~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 511 (707)
.+.++|++.+.||+|+||.||+|+ ..+|+.||+|++....... ..+.+.+|+++++.++||||+++++++...+..+
T Consensus 7 ~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~--~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~ 84 (347)
T 3zgw_A 7 ELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGS--DLPRIKTEIEALKNLRHQHICQLYHVLETANKIF 84 (347)
T ss_dssp TTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC-----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccch--HHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEE
Confidence 346789999999999999999995 5689999999987643322 3456889999999999999999999999999999
Q ss_pred EEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceec
Q 038671 512 IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFL 591 (707)
Q Consensus 512 lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~ 591 (707)
+||||+++++|.+++... ..+++..++.++.||+.||+|||+. ||+||||||+||+++.++.+||+|||++...
T Consensus 85 lv~E~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~ 158 (347)
T 3zgw_A 85 MVLEYCPGGELFDYIISQ---DRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKP 158 (347)
T ss_dssp EEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC-
T ss_pred EEEeCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccc
Confidence 999999999999998543 3589999999999999999999999 9999999999999999999999999998765
Q ss_pred CCCC-CCccccccccCCCCccccccCCC-CccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCC
Q 038671 592 KPDS-SNWAELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTP 669 (707)
Q Consensus 592 ~~~~-~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (707)
.... ......+||+.|+|||.+.+..+ +.++||||+|+++|+|++|+.||+... .......+.......+
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~--------~~~~~~~i~~~~~~~p 230 (347)
T 3zgw_A 159 KGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN--------VMALYKKIMRGKYDVP 230 (347)
T ss_dssp -------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHTCCCCC
T ss_pred cCCCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHcCCCCCC
Confidence 4332 23455689999999999988775 889999999999999999999996322 2222223333333332
Q ss_pred CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 670 SHNVQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 670 ~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
.. .+.++.+++.+||+.||++|||++|+++.
T Consensus 231 ~~----~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 231 KW----LSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp TT----CCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred CC----CCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 22 23447889999999999999999999863
No 28
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=6.6e-43 Score=355.22 Aligned_cols=259 Identities=26% Similarity=0.386 Sum_probs=207.3
Q ss_pred hcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIV 513 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 513 (707)
.++|++.+.||+|+||.||+|+ ..+++.||+|++...........+.+.+|+..+++++||||+++++++.+++..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 4689999999999999999995 457899999998765555555667899999999999999999999999999999999
Q ss_pred EeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCC
Q 038671 514 YEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKP 593 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~ 593 (707)
|||+++++|.+++... .++++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++.....
T Consensus 90 ~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 163 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESH---GPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE 163 (294)
T ss_dssp EECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC--
T ss_pred EeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCcccccc
Confidence 9999999999999643 3589999999999999999999999 999999999999999999999999999986553
Q ss_pred CC-CCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCcc
Q 038671 594 DS-SNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHN 672 (707)
Q Consensus 594 ~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (707)
.. .......||+.|+|||.+.+..++.++||||||+++|+|++|+.||..... ...................
T Consensus 164 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~-------~~~~~~~~~~~~~~~~~~~ 236 (294)
T 4eqm_A 164 TSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA-------VSIAIKHIQDSVPNVTTDV 236 (294)
T ss_dssp -----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCH-------HHHHHHHHSSCCCCHHHHS
T ss_pred ccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh-------HHHHHHHhhccCCCcchhc
Confidence 32 223345799999999999999999999999999999999999999964221 1112222222111111111
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCC-CHHHHHHHhc
Q 038671 673 VQDKLISIMEVAISCLDESPESRP-TIQKVSQLLK 706 (707)
Q Consensus 673 ~~~~~~~l~~li~~cl~~~P~~Rp-s~~~l~~~L~ 706 (707)
..+.+..+.+++.+||+.||++|| +++++.+.|+
T Consensus 237 ~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~ 271 (294)
T 4eqm_A 237 RKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLS 271 (294)
T ss_dssp CTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHH
Confidence 123445689999999999999999 8888888764
No 29
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.5e-42 Score=361.10 Aligned_cols=255 Identities=21% Similarity=0.279 Sum_probs=210.7
Q ss_pred HhcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCch---hhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCc
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSE---MASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARH 509 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 509 (707)
+.+.|++.+.||+|+||.||+|.. .+|+.||+|++....... ....+.+.+|+.++++++||||+++++++.+.+.
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 457899999999999999999954 579999999987543221 1235678999999999999999999999999999
Q ss_pred eeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCC----CeEEecc
Q 038671 510 SFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLEN----EAHVSDF 585 (707)
Q Consensus 510 ~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~----~~kl~Df 585 (707)
.++||||+.||+|.+++... ..+++..++.++.||+.||+|||+. ||+||||||+||+++.++ .+||+||
T Consensus 90 ~~lv~e~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DF 163 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (361)
T ss_dssp EEEEEECCCSCBHHHHHTTC---SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEec
Confidence 99999999999999999643 4589999999999999999999999 999999999999998877 7999999
Q ss_pred ccceecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCC
Q 038671 586 GTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPR 665 (707)
Q Consensus 586 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (707)
|++...... .......||+.|+|||++.+..++.++||||+|+++|+|++|+.||.... .......+....
T Consensus 164 G~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~--------~~~~~~~i~~~~ 234 (361)
T 2yab_A 164 GLAHEIEDG-VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT--------KQETLANITAVS 234 (361)
T ss_dssp SSCEECCTT-CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS--------HHHHHHHHHTTC
T ss_pred CCceEcCCC-CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhcC
Confidence 999876543 23345689999999999999899999999999999999999999996321 222233333333
Q ss_pred CCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 666 LPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 666 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
...+.......+..+.+++.+||..||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 235 YDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 33222222234456899999999999999999999986
No 30
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.3e-42 Score=371.05 Aligned_cols=257 Identities=20% Similarity=0.279 Sum_probs=211.7
Q ss_pred HHhcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCcee
Q 038671 433 RVTNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSF 511 (707)
Q Consensus 433 ~~~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 511 (707)
.+.++|++.+.||+|+||.||+|. ..+|+.+|+|++...... ....+.+.+|+++++.++||||+++++++.+++..+
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 86 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLS-ARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHY 86 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCH-HHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEE
Confidence 456789999999999999999994 567999999998765433 234567899999999999999999999999999999
Q ss_pred EEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeec---CCCCeEEeccccc
Q 038671 512 IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLD---LENEAHVSDFGTA 588 (707)
Q Consensus 512 lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~---~~~~~kl~Dfg~~ 588 (707)
+||||+.||+|.+.+... ..+++..+..++.||+.||+|||+. ||+||||||+||+++ .++.+||+|||++
T Consensus 87 lv~E~~~gg~L~~~i~~~---~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a 160 (444)
T 3soa_A 87 LIFDLVTGGELFEDIVAR---EYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLA 160 (444)
T ss_dssp EEECCCBCCBHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSC
T ss_pred EEEEeCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCcee
Confidence 999999999999988643 4589999999999999999999999 999999999999998 4678999999999
Q ss_pred eecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCC
Q 038671 589 KFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPT 668 (707)
Q Consensus 589 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (707)
..............||+.|+|||++.+..++.++||||+|+++|+|++|+.||.... .......+.......
T Consensus 161 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~--------~~~~~~~i~~~~~~~ 232 (444)
T 3soa_A 161 IEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED--------QHRLYQQIKAGAYDF 232 (444)
T ss_dssp BCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSS--------HHHHHHHHHHTCCCC
T ss_pred EEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCcc--------HHHHHHHHHhCCCCC
Confidence 877665555566789999999999999899999999999999999999999985321 122222222222222
Q ss_pred CCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 669 PSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 669 ~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
+.......+.++.+++.+||+.||++|||+.|+++.
T Consensus 233 ~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 233 PSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp CTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 222222344568999999999999999999999863
No 31
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=6.7e-42 Score=351.15 Aligned_cols=254 Identities=26% Similarity=0.463 Sum_probs=207.1
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIV 513 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 513 (707)
.++|++.+.||+|+||.||+|.. .+++.||+|++... .....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 85 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF---DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFI 85 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEE
Confidence 35789999999999999999954 57999999988543 334567899999999999999999999999999999999
Q ss_pred EeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCC
Q 038671 514 YEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKP 593 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~ 593 (707)
|||+++++|.+++... ...+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 86 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 160 (310)
T 3s95_A 86 TEYIKGGTLRGIIKSM--DSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVD 160 (310)
T ss_dssp EECCTTCBHHHHHHHC--CTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC-
T ss_pred EEecCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccc
Confidence 9999999999999643 34689999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCc--------------cccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccc-ccchhhhhh
Q 038671 594 DSSNW--------------AELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISS-SSSNLEIAL 658 (707)
Q Consensus 594 ~~~~~--------------~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~-~~~~~~~~~ 658 (707)
..... ....||+.|+|||.+.+..++.++||||||+++|||++|..||........ .........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~ 240 (310)
T 3s95_A 161 EKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFL 240 (310)
T ss_dssp -------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHH
T ss_pred ccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccc
Confidence 32211 145799999999999999999999999999999999999999864322111 111111122
Q ss_pred hhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 659 NEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
.....+.+ +..+.+++.+||+.||++|||+.++++.|+
T Consensus 241 ~~~~~~~~----------~~~l~~li~~~l~~dP~~Rps~~~l~~~L~ 278 (310)
T 3s95_A 241 DRYCPPNC----------PPSFFPITVRCCDLDPEKRPSFVKLEHWLE 278 (310)
T ss_dssp HHTCCTTC----------CTTHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cccCCCCC----------CHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 22212222 234889999999999999999999999875
No 32
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=7.9e-43 Score=362.39 Aligned_cols=251 Identities=22% Similarity=0.344 Sum_probs=202.9
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcC-CCCceeeeeeeeecCCceeE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGFCSHARHSFI 512 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 512 (707)
.++|++.+.||+|+||.||+|+. .+|+.||+|++...........+.+.+|.+++..+ +||||+++++++.+.+..|+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 47899999999999999999964 56899999998653222333456688899999988 69999999999999999999
Q ss_pred EEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecC
Q 038671 513 VYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLK 592 (707)
Q Consensus 513 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~ 592 (707)
||||+.||+|.+++... +.+++..++.++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++...
T Consensus 102 v~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~ 175 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKS---RRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI 175 (353)
T ss_dssp EEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeecc
Confidence 99999999999998643 4589999999999999999999999 99999999999999999999999999998655
Q ss_pred CCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCcc
Q 038671 593 PDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHN 672 (707)
Q Consensus 593 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (707)
.........+||+.|+|||++.+..++.++||||||+++|||++|+.||.... .......+.......+..
T Consensus 176 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~--------~~~~~~~i~~~~~~~p~~- 246 (353)
T 3txo_A 176 CNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN--------EDDLFEAILNDEVVYPTW- 246 (353)
T ss_dssp C---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCCCCCCTT-
T ss_pred cCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCC--------HHHHHHHHHcCCCCCCCC-
Confidence 44455566789999999999999889999999999999999999999996322 122233333333333222
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCH------HHHHH
Q 038671 673 VQDKLISIMEVAISCLDESPESRPTI------QKVSQ 703 (707)
Q Consensus 673 ~~~~~~~l~~li~~cl~~~P~~Rps~------~~l~~ 703 (707)
.+.++.+++.+|++.||++||++ +++++
T Consensus 247 ---~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 247 ---LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp ---SCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred ---CCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 23458899999999999999998 66654
No 33
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-42 Score=356.10 Aligned_cols=252 Identities=21% Similarity=0.280 Sum_probs=209.5
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIV 513 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 513 (707)
.++|++.+.||+|+||.||+|.. .+++.||+|++.... .....+.+|+++++.++||||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~----~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 79 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG----TDQVLVKKEISILNIARHRNILHLHESFESMEELVMI 79 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT----HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc----ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEE
Confidence 46899999999999999999954 568999999986431 2446688999999999999999999999999999999
Q ss_pred EeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecC--CCCeEEeccccceec
Q 038671 514 YEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDL--ENEAHVSDFGTAKFL 591 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~--~~~~kl~Dfg~~~~~ 591 (707)
|||+++++|.+++... ...+++..++.++.||+.||+|||+. ||+||||||+||+++. ++.+||+|||++...
T Consensus 80 ~e~~~g~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~ 154 (321)
T 1tki_A 80 FEFISGLDIFERINTS--AFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL 154 (321)
T ss_dssp ECCCCCCBHHHHHTSS--SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEEC
T ss_pred EEeCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeEC
Confidence 9999999999999643 24589999999999999999999999 9999999999999987 789999999999887
Q ss_pred CCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCc
Q 038671 592 KPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSH 671 (707)
Q Consensus 592 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (707)
... .......||+.|+|||++.+..++.++||||+|+++|+|++|+.||.... .......+.......+..
T Consensus 155 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~~~i~~~~~~~~~~ 225 (321)
T 1tki_A 155 KPG-DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET--------NQQIIENIMNAEYTFDEE 225 (321)
T ss_dssp CTT-CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHHTCCCCCHH
T ss_pred CCC-CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCC--------HHHHHHHHHcCCCCCChh
Confidence 543 33455679999999999998888999999999999999999999996322 122223333333332222
Q ss_pred chHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 672 NVQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 672 ~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
.....+.++.+++.+||..||++|||+.|+++.
T Consensus 226 ~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 226 AFKEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 222345678999999999999999999999863
No 34
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.1e-41 Score=350.52 Aligned_cols=262 Identities=26% Similarity=0.386 Sum_probs=213.3
Q ss_pred ccchHHHHHHHhcC----------CCCCceeeecCCeeEEEEEcC-CCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcC
Q 038671 424 GKIVYEEIIRVTND----------FDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI 492 (707)
Q Consensus 424 ~~~~~~~~~~~~~~----------~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l 492 (707)
+.++.+++..+.+. |+..+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|+.+++++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l 99 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ---QRRELLFNEVVIMRDY 99 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---CSHHHHHHHHHHHTTC
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch---hHHHHHHHHHHHHHhC
Confidence 34556666665543 667789999999999999654 799999999865432 2356788999999999
Q ss_pred CCCceeeeeeeeecCCceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCe
Q 038671 493 RHRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNV 572 (707)
Q Consensus 493 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Ni 572 (707)
+||||+++++++...+..++||||+++++|.+++.. ..+++..++.++.|++.||+|||+. ||+||||||+||
T Consensus 100 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NI 172 (321)
T 2c30_A 100 QHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ----VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSI 172 (321)
T ss_dssp CCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGE
T ss_pred CCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHE
Confidence 999999999999999999999999999999999863 3589999999999999999999999 999999999999
Q ss_pred eecCCCCeEEeccccceecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccc
Q 038671 573 LLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSS 652 (707)
Q Consensus 573 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~ 652 (707)
+++.++.+||+|||++..............||+.|+|||.+.+..++.++||||||+++|+|++|+.||..... .
T Consensus 173 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~-----~ 247 (321)
T 2c30_A 173 LLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP-----V 247 (321)
T ss_dssp EECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-----H
T ss_pred EECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----H
Confidence 99999999999999998876554445567899999999999998999999999999999999999999863221 1
Q ss_pred hhhhhhhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 653 NLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
...........+.... ....+..+.+++.+||+.||++|||++++++.
T Consensus 248 ~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 248 QAMKRLRDSPPPKLKN----SHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp HHHHHHHHSSCCCCTT----GGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHHhcCCCCCcCc----cccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1111122222222221 12234568899999999999999999999863
No 35
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=7.2e-42 Score=358.66 Aligned_cols=255 Identities=22% Similarity=0.394 Sum_probs=208.4
Q ss_pred hcCCCCCceeeecCCeeEEEEEc--------CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcC-CCCceeeeeeeee
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL--------PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGFCS 505 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~ 505 (707)
.++|++.+.||+|+||.||+|+. .++..||+|++.... .....+.+.+|+++++++ +||||+++++++.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 157 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 157 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC--BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEEC
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc--CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEc
Confidence 36789999999999999999964 245679999997643 233567799999999999 8999999999999
Q ss_pred cCCceeEEEeeeccCcHHHHHhcccc-------------cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCe
Q 038671 506 HARHSFIVYEYLEMGSLAMILSNDAA-------------AKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNV 572 (707)
Q Consensus 506 ~~~~~~lv~e~~~~~~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Ni 572 (707)
..+..|+||||+++|+|.+++..... ...+++..++.++.||+.||+|||++ ||+||||||+||
T Consensus 158 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NI 234 (370)
T 2psq_A 158 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNV 234 (370)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGE
T ss_pred cCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhE
Confidence 99999999999999999999975432 23588999999999999999999999 999999999999
Q ss_pred eecCCCCeEEeccccceecCCCCC--CccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccc
Q 038671 573 LLDLENEAHVSDFGTAKFLKPDSS--NWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISS 649 (707)
Q Consensus 573 l~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~ 649 (707)
+++.++.+||+|||+++....... ......+++.|+|||++.+..++.++||||||+++|||++ |+.||.....
T Consensus 235 ll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~--- 311 (370)
T 2psq_A 235 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--- 311 (370)
T ss_dssp EECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG---
T ss_pred EECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH---
Confidence 999999999999999987654332 2233456789999999999999999999999999999999 9999864321
Q ss_pred ccchhhhhhhhhcCCC-CCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 650 SSSNLEIALNEMLDPR-LPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 650 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
........... ...+. ..+.++.+++.+||+.||.+||++.|+++.|+
T Consensus 312 -----~~~~~~~~~~~~~~~~~----~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~ 360 (370)
T 2psq_A 312 -----EELFKLLKEGHRMDKPA----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 360 (370)
T ss_dssp -----GGHHHHHHTTCCCCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -----HHHHHHHhcCCCCCCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11111122111 11111 23345899999999999999999999999875
No 36
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2.7e-42 Score=362.25 Aligned_cols=254 Identities=23% Similarity=0.344 Sum_probs=204.8
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcC-CCCceeeeeeeeecCCceeE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGFCSHARHSFI 512 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 512 (707)
.++|++.+.||+|+||.||+|+. .+++.||+|++...........+.+..|..++.++ +||||+++++++.+.+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 46799999999999999999965 56889999998754333333445678899999887 89999999999999999999
Q ss_pred EEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecC
Q 038671 513 VYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLK 592 (707)
Q Consensus 513 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~ 592 (707)
||||++||+|.+++... +.+++..++.++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++...
T Consensus 131 V~E~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~ 204 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 204 (396)
T ss_dssp EEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEcCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecc
Confidence 99999999999998643 4589999999999999999999999 99999999999999999999999999998755
Q ss_pred CCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccc-ccchhhhhhhhhcCCCCCCCCc
Q 038671 593 PDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISS-SSSNLEIALNEMLDPRLPTPSH 671 (707)
Q Consensus 593 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 671 (707)
.........+||+.|+|||++.+..++.++||||||+++|||++|+.||+....... ...........+.......+..
T Consensus 205 ~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~ 284 (396)
T 4dc2_A 205 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS 284 (396)
T ss_dssp CTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCTT
T ss_pred cCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCCc
Confidence 455556677899999999999999999999999999999999999999964322111 1111222233333333333322
Q ss_pred chHHHHHHHHHHHHhccCCCCCCCCCH
Q 038671 672 NVQDKLISIMEVAISCLDESPESRPTI 698 (707)
Q Consensus 672 ~~~~~~~~l~~li~~cl~~~P~~Rps~ 698 (707)
.+.++.+++.+||+.||++||++
T Consensus 285 ----~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 285 ----LSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp ----SCHHHHHHHHHHTCSCTTTSTTC
T ss_pred ----CCHHHHHHHHHHhcCCHhHcCCC
Confidence 23458899999999999999985
No 37
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=5.9e-41 Score=343.77 Aligned_cols=275 Identities=33% Similarity=0.529 Sum_probs=223.6
Q ss_pred ccchHHHHHHHhcCCCCC------ceeeecCCeeEEEEEcCCCcEEEEEecCCCCC-chhhhHHHHHHHHHHHhcCCCCc
Q 038671 424 GKIVYEEIIRVTNDFDDE------HCIGKGGQGSVYKAELPSGEIVAVKKFHSPLP-SEMASQQEFLNEVKTLTGIRHRN 496 (707)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~------~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~n 496 (707)
..+.+.++..+++.|... +.||+|+||.||+|.. +++.||+|++..... ......+.+.+|++++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 345678888898888877 8999999999999987 588999999875432 22334577999999999999999
Q ss_pred eeeeeeeeecCCceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecC
Q 038671 497 IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDL 576 (707)
Q Consensus 497 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~ 576 (707)
|+++++++.+.+..++||||+++++|.+++.......++++..++.++.|++.||+|||+. |++||||||+||+++.
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDE 168 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECT
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcC
Confidence 9999999999999999999999999999997655556799999999999999999999999 9999999999999999
Q ss_pred CCCeEEeccccceecCCCCCC--ccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchh
Q 038671 577 ENEAHVSDFGTAKFLKPDSSN--WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNL 654 (707)
Q Consensus 577 ~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~ 654 (707)
++.+||+|||++......... .....|++.|+|||.+.+ .++.++||||||+++|+|++|+.||+............
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 247 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 247 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHH
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHH
Confidence 999999999999876543222 233578999999998765 48899999999999999999999997533221111111
Q ss_pred h------hhhhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 655 E------IALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 655 ~------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
. ..+....++.++. .....+..+.+++.+||+.||.+||++.++++.|+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~ 302 (307)
T 2nru_A 248 EEIEDEEKTIEDYIDKKMND---ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302 (307)
T ss_dssp HHHHTTSCCHHHHSCSSCSC---CCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred HHhhhhhhhhhhhccccccc---cchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 1 1122233333322 33566778999999999999999999999999875
No 38
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-41 Score=350.30 Aligned_cols=265 Identities=20% Similarity=0.326 Sum_probs=212.8
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCC--cee
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHAR--HSF 511 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~ 511 (707)
.++|++.+.||+|+||.||+|.. .+++.||+|++..... ....+.+.+|++++++++||||+++++++.... ..+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 85 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG--GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEE
Confidence 36799999999999999999955 4699999999864322 223567789999999999999999999987655 779
Q ss_pred EEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeee----cCCCCeEEecccc
Q 038671 512 IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLL----DLENEAHVSDFGT 587 (707)
Q Consensus 512 lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~----~~~~~~kl~Dfg~ 587 (707)
+||||+++++|.+++........+++..++.++.||+.||+|||+. ||+||||||+||++ +.++.+||+|||+
T Consensus 86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~ 162 (319)
T 4euu_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (319)
T ss_dssp EEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCC
Confidence 9999999999999998765555699999999999999999999999 99999999999999 7778899999999
Q ss_pred ceecCCCCCCccccccccCCCCccccc--------cCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhh
Q 038671 588 AKFLKPDSSNWAELAGTYGYVAPELAY--------TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALN 659 (707)
Q Consensus 588 ~~~~~~~~~~~~~~~g~~~y~aPE~~~--------~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 659 (707)
++...... ......||+.|+|||++. +..++.++||||||+++|||++|+.||..................
T Consensus 163 a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 241 (319)
T 4euu_A 163 ARELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (319)
T ss_dssp CEECCTTC-CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHH
T ss_pred ceecCCCC-ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhc
Confidence 98765443 334467999999999876 467899999999999999999999999643322211111222111
Q ss_pred hhc-----------------CCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 038671 660 EML-----------------DPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLL 705 (707)
Q Consensus 660 ~~~-----------------~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L 705 (707)
... ....+.........+..+.+++.+||+.||++|||++|+++..
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~ 304 (319)
T 4euu_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET 304 (319)
T ss_dssp HCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred CCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence 111 0122333344567788899999999999999999999998753
No 39
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.1e-42 Score=362.42 Aligned_cols=258 Identities=21% Similarity=0.267 Sum_probs=208.4
Q ss_pred HhcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCC--chhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCce
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLP--SEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHS 510 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 510 (707)
+.++|++.+.||+|+||.||+|. ..+|+.||+|++..... ......+.+.+|+++++.++||||+++++++.+.+..
T Consensus 22 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 101 (351)
T 3c0i_A 22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGML 101 (351)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred cccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 34679999999999999999995 45799999999853210 0111356789999999999999999999999999999
Q ss_pred eEEEeeeccCcHHHHHhccc-ccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCC---eEEeccc
Q 038671 511 FIVYEYLEMGSLAMILSNDA-AAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENE---AHVSDFG 586 (707)
Q Consensus 511 ~lv~e~~~~~~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~---~kl~Dfg 586 (707)
++||||+++++|.+.+.... ....+++..++.++.||+.||+|||++ +|+||||||+||+++.++. +||+|||
T Consensus 102 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg 178 (351)
T 3c0i_A 102 YMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFG 178 (351)
T ss_dssp EEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCT
T ss_pred EEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCc
Confidence 99999999999988875433 233589999999999999999999999 9999999999999987654 9999999
Q ss_pred cceecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCC
Q 038671 587 TAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRL 666 (707)
Q Consensus 587 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (707)
++..............||+.|+|||++.+..++.++||||||+++|+|++|+.||.... ......+.....
T Consensus 179 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~---------~~~~~~i~~~~~ 249 (351)
T 3c0i_A 179 VAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK---------ERLFEGIIKGKY 249 (351)
T ss_dssp TCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH---------HHHHHHHHHTCC
T ss_pred ceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH---------HHHHHHHHcCCC
Confidence 99887655444455689999999999999899999999999999999999999996321 122222222222
Q ss_pred CCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 667 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
..........+.++.+++.+||+.||++|||+.|+++
T Consensus 250 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 250 KMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 2221111233456899999999999999999999986
No 40
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=4.7e-42 Score=358.73 Aligned_cols=256 Identities=20% Similarity=0.315 Sum_probs=210.3
Q ss_pred HHhcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCcee
Q 038671 433 RVTNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSF 511 (707)
Q Consensus 433 ~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 511 (707)
.+.++|++.+.||+|+||.||+|.. .+|+.||+|++...... ....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ 104 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHY 104 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence 4457899999999999999999954 57899999999765433 234567899999999999999999999999999999
Q ss_pred EEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCC---CeEEeccccc
Q 038671 512 IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLEN---EAHVSDFGTA 588 (707)
Q Consensus 512 lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~---~~kl~Dfg~~ 588 (707)
+||||+.+++|.+++... ..+++..++.++.||+.||+|||+. ||+||||||+||+++.++ .+||+|||++
T Consensus 105 lv~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a 178 (362)
T 2bdw_A 105 LVFDLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA 178 (362)
T ss_dssp EEECCCCSCBHHHHHTTC---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcc
Confidence 999999999999998643 4589999999999999999999999 999999999999998654 5999999999
Q ss_pred eecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCC
Q 038671 589 KFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPT 668 (707)
Q Consensus 589 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (707)
...... .......||+.|+|||++.+..++.++||||||+++|+|++|+.||.... .......+.......
T Consensus 179 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~--------~~~~~~~i~~~~~~~ 249 (362)
T 2bdw_A 179 IEVNDS-EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED--------QHRLYAQIKAGAYDY 249 (362)
T ss_dssp BCCTTC-CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHTCCCC
T ss_pred eEecCC-cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHhCCCCC
Confidence 876533 23345689999999999999899999999999999999999999986321 112222222222222
Q ss_pred CCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 669 PSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 669 ~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
+.......+.++.+++.+||+.||++||++.++++.
T Consensus 250 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 250 PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp CTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 222233445668999999999999999999998763
No 41
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.3e-42 Score=356.08 Aligned_cols=249 Identities=22% Similarity=0.308 Sum_probs=203.0
Q ss_pred hcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIV 513 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 513 (707)
.++|++.+.||+|+||.||+|. ..+++.||+|++.............+.+|+++++.++||||+++++++..++..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3689999999999999999996 468999999998643222222335788999999999999999999999999999999
Q ss_pred EeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCC
Q 038671 514 YEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKP 593 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~ 593 (707)
|||+ +|+|.+++... +.+++..++.++.||+.||+|||+. ||+||||||+||+++.++.+||+|||++.....
T Consensus 88 ~E~~-~g~l~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~ 160 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEK---KRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD 160 (336)
T ss_dssp ECCC-CEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTT
T ss_pred EECC-CCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccC
Confidence 9999 67888887543 4589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCccccccccCCCCccccccCCC-CccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCcc
Q 038671 594 DSSNWAELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHN 672 (707)
Q Consensus 594 ~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (707)
. ......+||+.|+|||.+.+..+ +.++||||+|+++|+|++|+.||+.... ......+.......+..
T Consensus 161 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~--------~~~~~~i~~~~~~~p~~- 230 (336)
T 3h4j_B 161 G-NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFI--------PNLFKKVNSCVYVMPDF- 230 (336)
T ss_dssp S-BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSS--------TTCBCCCCSSCCCCCTT-
T ss_pred C-cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccH--------HHHHHHHHcCCCCCccc-
Confidence 3 23345689999999999988776 6899999999999999999999963211 11111222222222221
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 673 VQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 673 ~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
.+.++.+++.+||+.||.+|||++|+++
T Consensus 231 ---~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 231 ---LSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp ---SCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred ---CCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 2345889999999999999999999976
No 42
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=7.8e-42 Score=354.32 Aligned_cols=253 Identities=24% Similarity=0.347 Sum_probs=206.1
Q ss_pred cCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcC-CCCceeeeeeeeecCCceeEE
Q 038671 436 NDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGFCSHARHSFIV 513 (707)
Q Consensus 436 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv 513 (707)
++|++.+.||+|+||.||+|+. .+++.||+|++...........+.+.+|..++.++ +||||+++++++.+.+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 5789999999999999999965 56899999999765444444566788999999988 899999999999999999999
Q ss_pred EeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCC
Q 038671 514 YEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKP 593 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~ 593 (707)
|||+++|+|.+++... ..+++..++.++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++....
T Consensus 89 ~e~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~ 162 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 162 (345)
T ss_dssp ECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCC
T ss_pred EeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccC
Confidence 9999999999998643 4589999999999999999999999 999999999999999999999999999987554
Q ss_pred CCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccc-cchhhhhhhhhcCCCCCCCCcc
Q 038671 594 DSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSS-SSNLEIALNEMLDPRLPTPSHN 672 (707)
Q Consensus 594 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 672 (707)
........+||+.|+|||++.+..++.++||||||+++|||++|+.||......... ..........+.......+..
T Consensus 163 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~- 241 (345)
T 3a8x_A 163 PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS- 241 (345)
T ss_dssp TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCCTT-
T ss_pred CCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCCCC-
Confidence 444556678999999999999999999999999999999999999999643221110 111122222222233322222
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCH
Q 038671 673 VQDKLISIMEVAISCLDESPESRPTI 698 (707)
Q Consensus 673 ~~~~~~~l~~li~~cl~~~P~~Rps~ 698 (707)
.+.++.+++.+||+.||++||++
T Consensus 242 ---~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 242 ---LSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp ---SCHHHHHHHHHHTCSSTTTSTTC
T ss_pred ---CCHHHHHHHHHHhcCCHhHCCCC
Confidence 23458899999999999999995
No 43
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.1e-41 Score=351.32 Aligned_cols=253 Identities=26% Similarity=0.445 Sum_probs=204.7
Q ss_pred hcCCCCCceeeecCCeeEEEEEcC----CCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCce
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAELP----SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHS 510 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 510 (707)
.++|++.+.||+|+||.||+|... .+..||||++.... .....+.+.+|+.++++++||||+++++++.+++..
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 125 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY--TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLA 125 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCC
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCcc
Confidence 467888999999999999999653 35569999997543 233557799999999999999999999999999999
Q ss_pred eEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEecccccee
Q 038671 511 FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKF 590 (707)
Q Consensus 511 ~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~ 590 (707)
++||||+++++|.++++.. ...+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++..
T Consensus 126 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 200 (325)
T 3kul_A 126 MIVTEYMENGSLDTFLRTH--DGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRV 200 (325)
T ss_dssp EEEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred EEEeeCCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccc
Confidence 9999999999999999643 24589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCc---cccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchhhhhhhhhcC-CC
Q 038671 591 LKPDSSNW---AELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNLEIALNEMLD-PR 665 (707)
Q Consensus 591 ~~~~~~~~---~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~ 665 (707)
........ ....+|+.|+|||.+.+..++.++||||||+++|+|++ |+.||..... ......+.. ..
T Consensus 201 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--------~~~~~~~~~~~~ 272 (325)
T 3kul_A 201 LEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN--------RDVISSVEEGYR 272 (325)
T ss_dssp CC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH--------HHHHHHHHTTCC
T ss_pred cccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH--------HHHHHHHHcCCC
Confidence 65443221 22345778999999998889999999999999999999 9999863221 111111111 12
Q ss_pred CCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 666 LPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 666 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
.+.+. ..+.++.+++.+||+.||++||++.++++.|+
T Consensus 273 ~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~ 309 (325)
T 3kul_A 273 LPAPM----GCPHALHQLMLDCWHKDRAQRPRFSQIVSVLD 309 (325)
T ss_dssp CCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCC----CcCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 22222 23356899999999999999999999999885
No 44
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.3e-42 Score=353.71 Aligned_cols=255 Identities=21% Similarity=0.290 Sum_probs=207.8
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCch---hhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCce
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSE---MASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHS 510 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 510 (707)
.+.|++.+.||+|+||.||+|.. .+|+.||+|++....... ....+.+.+|+.++++++||||+++++++...+..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 45699999999999999999964 578999999986543221 12356789999999999999999999999999999
Q ss_pred eEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCC----CeEEeccc
Q 038671 511 FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLEN----EAHVSDFG 586 (707)
Q Consensus 511 ~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~----~~kl~Dfg 586 (707)
++||||+++++|.+++... ..+++..++.++.||+.||+|||+. ||+||||||+||+++.++ .+||+|||
T Consensus 90 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 163 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163 (326)
T ss_dssp EEEEECCCSCBHHHHHTTS---SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEEcCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence 9999999999999999643 4589999999999999999999999 999999999999999887 79999999
Q ss_pred cceecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCC
Q 038671 587 TAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRL 666 (707)
Q Consensus 587 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (707)
++....... ......||+.|+|||++.+..++.++||||||+++|+|++|+.||..... ......+.....
T Consensus 164 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~~~~~~~~ 234 (326)
T 2y0a_A 164 LAHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--------QETLANVSAVNY 234 (326)
T ss_dssp TCEECCTTS-CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--------HHHHHHHHHTCC
T ss_pred CCeECCCCC-ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH--------HHHHHHHHhcCC
Confidence 998765432 33456799999999999988999999999999999999999999863221 111111211122
Q ss_pred CCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 667 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
..+.......+..+.+++.+||+.||++|||+.|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 235 EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp CCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred CcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 21111112334568899999999999999999999863
No 45
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.9e-42 Score=358.01 Aligned_cols=253 Identities=23% Similarity=0.324 Sum_probs=206.0
Q ss_pred HHhcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcC-CCCceeeeeeeeecCCce
Q 038671 433 RVTNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGFCSHARHS 510 (707)
Q Consensus 433 ~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 510 (707)
...++|++.+.||+|+||.||+|+. .+|+.||+|++...........+.+..|..++..+ +||||+++++++.+.+..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 3457899999999999999999965 56899999998643211222345678889998877 899999999999999999
Q ss_pred eEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEecccccee
Q 038671 511 FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKF 590 (707)
Q Consensus 511 ~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~ 590 (707)
|+||||++||+|.+++... ..+++..++.++.||+.||+|||++ ||+||||||+||+++.+|.+||+|||+++.
T Consensus 94 ~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~ 167 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSC---HKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKE 167 (345)
T ss_dssp EEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhh
Confidence 9999999999999998643 4589999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCC
Q 038671 591 LKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPS 670 (707)
Q Consensus 591 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (707)
...........+||+.|+|||++.+..++.++||||||+++|||++|+.||..... ......+.......+.
T Consensus 168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--------~~~~~~i~~~~~~~p~ 239 (345)
T 1xjd_A 168 NMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE--------EELFHSIRMDNPFYPR 239 (345)
T ss_dssp CCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCCCCT
T ss_pred cccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHHHhCCCCCCc
Confidence 55444455667899999999999999999999999999999999999999963221 1122222222222221
Q ss_pred cchHHHHHHHHHHHHhccCCCCCCCCCHH-HHHH
Q 038671 671 HNVQDKLISIMEVAISCLDESPESRPTIQ-KVSQ 703 (707)
Q Consensus 671 ~~~~~~~~~l~~li~~cl~~~P~~Rps~~-~l~~ 703 (707)
..+.++.+++.+||..||++||++. ++++
T Consensus 240 ----~~s~~~~~li~~lL~~dp~~R~~~~~~i~~ 269 (345)
T 1xjd_A 240 ----WLEKEAKDLLVKLFVREPEKRLGVRGDIRQ 269 (345)
T ss_dssp ----TSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred ----ccCHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence 1234588999999999999999987 6543
No 46
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.4e-41 Score=348.22 Aligned_cols=260 Identities=20% Similarity=0.316 Sum_probs=203.2
Q ss_pred HHhcCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeE
Q 038671 433 RVTNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFI 512 (707)
Q Consensus 433 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 512 (707)
.+.++|++.+.||+|+||+||+|+..+|+.||+|++..... .......+.+|++++++++||||+++++++.+++..++
T Consensus 18 ~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 96 (311)
T 3niz_A 18 GLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAE-DEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTL 96 (311)
T ss_dssp CSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC-------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEE
T ss_pred chHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccc-cchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEE
Confidence 34578999999999999999999888899999999865432 22234678899999999999999999999999999999
Q ss_pred EEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecC
Q 038671 513 VYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLK 592 (707)
Q Consensus 513 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~ 592 (707)
||||+++ ++.+++... ...+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++....
T Consensus 97 v~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 170 (311)
T 3niz_A 97 VFEFMEK-DLKKVLDEN--KTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFG 170 (311)
T ss_dssp EEECCSE-EHHHHHHTC--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETT
T ss_pred EEcCCCC-CHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecC
Confidence 9999985 777777543 24589999999999999999999999 99999999999999999999999999998876
Q ss_pred CCCCCccccccccCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCC-------
Q 038671 593 PDSSNWAELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDP------- 664 (707)
Q Consensus 593 ~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~------- 664 (707)
..........||+.|+|||.+.+ ..++.++||||+|+++|+|++|+.||....... ...........+
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~----~~~~i~~~~~~~~~~~~~~ 246 (311)
T 3niz_A 171 IPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD----QLPKIFSILGTPNPREWPQ 246 (311)
T ss_dssp SCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT----HHHHHHHHHCCCCTTTSGG
T ss_pred CCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH----HHHHHHHHHCCCChHHhhh
Confidence 55555556688999999999876 558999999999999999999999996433211 111111111000
Q ss_pred ----------CCCCCCc-----chHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 665 ----------RLPTPSH-----NVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 665 ----------~~~~~~~-----~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
....... ..+..+.++.+++.+||+.||++|||++|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 247 VQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp GTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0000000 00112346889999999999999999999986
No 47
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=4.8e-41 Score=386.72 Aligned_cols=348 Identities=34% Similarity=0.523 Sum_probs=285.5
Q ss_pred CCCCCceeeccCCeeeecCCccccCC-CCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCcc-ccCCCCCC
Q 038671 1 NLSNLAFLYLYNNSFSGSIPSEIGRL-KSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKE-YGNLVKLT 78 (707)
Q Consensus 1 nl~~l~~L~l~~n~i~~~~~~~~~~l-~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~-~~~l~~L~ 78 (707)
++++|++|+|++|.+++.+|..+... ++|++|+|++|++++..|..|.++++|++|+|++|.+++.+|.. |.++++|+
T Consensus 267 ~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~ 346 (768)
T 3rgz_A 267 PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLK 346 (768)
T ss_dssp CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCC
T ss_pred ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCC
Confidence 47899999999999999999999876 99999999999999999999999999999999999999777765 99999999
Q ss_pred eeecccccccc-cCCCCCC---------------------------CCCccEEEeccCccccccCccccCCCCCcEEEcc
Q 038671 79 LLTLENNQLRG-PIPNLRN---------------------------LTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLS 130 (707)
Q Consensus 79 ~L~l~~n~i~~-~~~~l~~---------------------------l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~ 130 (707)
+|++++|.+.. ++..+.. +++|++|++++|++++..+..+..+++|++|+|+
T Consensus 347 ~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls 426 (768)
T 3rgz_A 347 VLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLS 426 (768)
T ss_dssp EEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECC
T ss_pred EEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECc
Confidence 99999999973 3333333 4456666666666666667777778888888888
Q ss_pred cccccccCCCCCCCCCCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCC
Q 038671 131 HNYFYGEISSDWGRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQL 210 (707)
Q Consensus 131 ~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 210 (707)
+|.+++..+..+..+++|+.|+|++|.+++..+..+..+++|+.|++++|++++..|..+..+++|++|++++|++++..
T Consensus 427 ~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 506 (768)
T 3rgz_A 427 FNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEI 506 (768)
T ss_dssp SSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCC
T ss_pred CCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcC
Confidence 88888777777888888888888888888778888888888888888888888778888888888888888888888888
Q ss_pred ccccCCCCcccEEEccCCccCCCCCccccCcccCceEeeecccccccCchhh----------------------------
Q 038671 211 SLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPVEL---------------------------- 262 (707)
Q Consensus 211 ~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~---------------------------- 262 (707)
|.++..+++|++|+|++|++++.+|..+.++++|+.|++++|++.+..|..+
T Consensus 507 p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (768)
T 3rgz_A 507 PKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKE 586 (768)
T ss_dssp CGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTT
T ss_pred ChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccccc
Confidence 8888888888888888888888888888888888888888888776555433
Q ss_pred ------------------------------------------hhcccCCeeeecCccCCCCCCcccccccccceEecccc
Q 038671 263 ------------------------------------------EKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHN 300 (707)
Q Consensus 263 ------------------------------------------~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n 300 (707)
..+++|+.|+|++|.+++.+|..++.+++|+.|++++|
T Consensus 587 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N 666 (768)
T 3rgz_A 587 CHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHN 666 (768)
T ss_dssp CCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSS
T ss_pred ccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCC
Confidence 22456788888888888888888888888888888888
Q ss_pred ccCCchhHhhccCCCceeEeeccCcccccCCCc-cccccCchhhcccCc
Q 038671 301 NLSGFIPSCFEELHGLSYIDISYNELHGSIPNS-TAFRDAPMEALQGNK 348 (707)
Q Consensus 301 ~i~~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~-~~~~~~~~~~~~~~~ 348 (707)
++++.+|..+..+++|+.|++++|+++|.+|.. ..+.......+..|+
T Consensus 667 ~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~ 715 (768)
T 3rgz_A 667 DISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNN 715 (768)
T ss_dssp CCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSE
T ss_pred ccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCc
Confidence 888888888888888888888888888887753 334445555566554
No 48
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.6e-41 Score=340.63 Aligned_cols=252 Identities=29% Similarity=0.471 Sum_probs=207.6
Q ss_pred hcCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVY 514 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 514 (707)
.++|++.+.||+|+||.||+|+.+++..||+|++..... ..+++.+|++++.+++||||+++++++.+.+..++||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM----SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVT 82 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC----cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEE
Confidence 467999999999999999999988888999999875432 2356889999999999999999999999999999999
Q ss_pred eeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCC
Q 038671 515 EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPD 594 (707)
Q Consensus 515 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 594 (707)
||+++++|.+++... ...+++..++.++.|++.||+|||+. |++||||||+||+++.++.+||+|||.+......
T Consensus 83 e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 157 (268)
T 3sxs_A 83 EYISNGCLLNYLRSH--GKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD 157 (268)
T ss_dssp ECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTT
T ss_pred EccCCCcHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchh
Confidence 999999999999643 34589999999999999999999999 9999999999999999999999999999876543
Q ss_pred CC-CccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchhhhhhhhhcCCCCCCCCcc
Q 038671 595 SS-NWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHN 672 (707)
Q Consensus 595 ~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (707)
.. ......+++.|+|||.+.+..++.++||||+|+++|+|++ |+.||+.... ...............+..
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~~- 229 (268)
T 3sxs_A 158 QYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN-------SEVVLKVSQGHRLYRPHL- 229 (268)
T ss_dssp CEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCH-------HHHHHHHHTTCCCCCCTT-
T ss_pred hhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccCh-------HHHHHHHHcCCCCCCCCc-
Confidence 22 1223345678999999998889999999999999999999 9999864322 111111111111222211
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 673 VQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 673 ~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
.+..+.+++.+||+.||++|||+.++++.|+
T Consensus 230 ---~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~ 260 (268)
T 3sxs_A 230 ---ASDTIYQIMYSCWHELPEKRPTFQQLLSSIE 260 (268)
T ss_dssp ---SCHHHHHHHHHTTCSSGGGSCCHHHHHHHHG
T ss_pred ---ChHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 2345889999999999999999999999886
No 49
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-41 Score=348.84 Aligned_cols=247 Identities=24% Similarity=0.362 Sum_probs=205.2
Q ss_pred cCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEEE
Q 038671 436 NDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVY 514 (707)
Q Consensus 436 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 514 (707)
++|++.+.||+|+||.||+|+. .+|+.||+|++...........+.+.+|..+++.++||||+++++++.+.+..++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 5789999999999999999965 579999999986432222234567889999999999999999999999999999999
Q ss_pred eeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCC
Q 038671 515 EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPD 594 (707)
Q Consensus 515 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 594 (707)
||++||+|.+++... ..+++..++.++.||+.||+|||++ ||+||||||+||+++.+|.+||+|||+++.....
T Consensus 86 e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~ 159 (318)
T 1fot_A 86 DYIEGGELFSLLRKS---QRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV 159 (318)
T ss_dssp CCCCSCBHHHHHHHT---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSSC
T ss_pred eCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCCc
Confidence 999999999999643 3589999999999999999999999 9999999999999999999999999999875432
Q ss_pred CCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCcchH
Q 038671 595 SSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHNVQ 674 (707)
Q Consensus 595 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (707)
....+||+.|+|||++.+..++.++||||||+++|||++|+.||.... .......+.......+..
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--------~~~~~~~i~~~~~~~p~~--- 225 (318)
T 1fot_A 160 ---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN--------TMKTYEKILNAELRFPPF--- 225 (318)
T ss_dssp ---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHHCCCCCCTT---
T ss_pred ---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCCCCCCCC---
Confidence 345689999999999999999999999999999999999999996322 112222222222222222
Q ss_pred HHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 038671 675 DKLISIMEVAISCLDESPESRP-----TIQKVSQ 703 (707)
Q Consensus 675 ~~~~~l~~li~~cl~~~P~~Rp-----s~~~l~~ 703 (707)
.+.++.+++.+|+..||++|| +++++++
T Consensus 226 -~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 226 -FNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp -SCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred -CCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 234588999999999999999 8888875
No 50
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=7.1e-42 Score=354.95 Aligned_cols=252 Identities=20% Similarity=0.283 Sum_probs=207.2
Q ss_pred HhcCCCCCceeeecCCeeEEEEEcC-CCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcC-CCCceeeeeeeeecCCcee
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGFCSHARHSF 511 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 511 (707)
..++|++.+.||+|+||.||+|+.+ +|+.||+|++...........+.+..|..++..+ +||+|+++++++.+.+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3578999999999999999999654 5889999998653222223456688899999988 7999999999999999999
Q ss_pred EEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceec
Q 038671 512 IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFL 591 (707)
Q Consensus 512 lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~ 591 (707)
+||||++||+|.+++... ..+++..++.++.||+.||+|||++ ||+||||||+||+++.+|.+||+|||+++..
T Consensus 98 lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~ 171 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 171 (353)
T ss_dssp EEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCccccc
Confidence 999999999999998643 3589999999999999999999999 9999999999999999999999999999875
Q ss_pred CCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCc
Q 038671 592 KPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSH 671 (707)
Q Consensus 592 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (707)
..........+||+.|+|||++.+..++.++||||||+++|||++|+.||.... .......+.......+.
T Consensus 172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~--------~~~~~~~i~~~~~~~p~- 242 (353)
T 2i0e_A 172 IWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED--------EDELFQSIMEHNVAYPK- 242 (353)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCCCCCCT-
T ss_pred ccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC--------HHHHHHHHHhCCCCCCC-
Confidence 544445566789999999999999999999999999999999999999996322 12222233323332222
Q ss_pred chHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHH
Q 038671 672 NVQDKLISIMEVAISCLDESPESRPT-----IQKVSQ 703 (707)
Q Consensus 672 ~~~~~~~~l~~li~~cl~~~P~~Rps-----~~~l~~ 703 (707)
..+.++.+++.+||+.||++||+ ++++++
T Consensus 243 ---~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 243 ---SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp ---TSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred ---CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 23345889999999999999995 466654
No 51
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.3e-41 Score=341.41 Aligned_cols=251 Identities=25% Similarity=0.436 Sum_probs=207.3
Q ss_pred hcCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVY 514 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 514 (707)
.++|++.+.||+|+||.||+|...+++.||+|++..... ..+.+.+|++++++++||||+++++++.+++..++||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM----SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVF 84 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc----CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEE
Confidence 357899999999999999999888899999999976432 2356899999999999999999999999999999999
Q ss_pred eeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCC
Q 038671 515 EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPD 594 (707)
Q Consensus 515 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 594 (707)
||+++++|.+++... ...+++..++.++.|++.||+|||+. |++||||||+||+++.++.+||+|||++......
T Consensus 85 e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 159 (269)
T 4hcu_A 85 EFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 159 (269)
T ss_dssp ECCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred EeCCCCcHHHHHHhc--CcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccc
Confidence 999999999999643 24589999999999999999999999 9999999999999999999999999999865432
Q ss_pred C-CCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchhhhhhhhhcCC-CCCCCCc
Q 038671 595 S-SNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNLEIALNEMLDP-RLPTPSH 671 (707)
Q Consensus 595 ~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 671 (707)
. .......+++.|+|||.+.+..++.++||||+|+++|+|++ |+.||..... .......... ....+..
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~ 231 (269)
T 4hcu_A 160 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN--------SEVVEDISTGFRLYKPRL 231 (269)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHHHHTTCCCCCCTT
T ss_pred ccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH--------HHHHHHHhcCccCCCCCc
Confidence 1 12233456778999999998899999999999999999999 9999864221 1112222221 1111111
Q ss_pred chHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 672 NVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 672 ~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
.+..+.+++.+||+.||++||++.++++.|+
T Consensus 232 ----~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~ 262 (269)
T 4hcu_A 232 ----ASTHVYQIMNHCWRERPEDRPAFSRLLRQLA 262 (269)
T ss_dssp ----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHccCCcccCcCHHHHHHHHH
Confidence 2345889999999999999999999999875
No 52
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=3.3e-41 Score=344.70 Aligned_cols=257 Identities=25% Similarity=0.379 Sum_probs=201.3
Q ss_pred hcCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVY 514 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 514 (707)
.++|++.+.||+|+||.||+|.... .+|+|+++.... .....+.+.+|++++++++||||+++++++. .+..++||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~ 110 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDP-TPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVT 110 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESSS--EEEEEECCCSSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEECC--EEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEE
Confidence 4689999999999999999997643 588998875432 3345678999999999999999999999875 45688999
Q ss_pred eeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCC
Q 038671 515 EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPD 594 (707)
Q Consensus 515 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 594 (707)
||+.+++|.+++... ...+++..++.++.||+.||+|||+. ||+||||||+||+++.++.+||+|||++......
T Consensus 111 e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~ 185 (307)
T 3lb7_A 111 QWCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp ECCSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC----
T ss_pred ecCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecccc
Confidence 999999999999643 34689999999999999999999999 9999999999999999999999999999765422
Q ss_pred --CCCccccccccCCCCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCC
Q 038671 595 --SSNWAELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTP 669 (707)
Q Consensus 595 --~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (707)
........||+.|+|||.+. +..++.++||||||+++|||++|+.||...... .............+....
T Consensus 186 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~---~~~~~~~~~~~~~~~~~~- 261 (307)
T 3lb7_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR---DQIIFMVGRGYASPDLSK- 261 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH---HHHHHHHHHTCCCCCSTT-
T ss_pred cccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcH---HHHHHHHhcCCCCcchhh-
Confidence 22334457999999999886 566888999999999999999999999743221 111111111222222221
Q ss_pred CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 670 SHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 670 ~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
.....+.++.+++.+||+.||++||++.|+++.|+
T Consensus 262 --~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~ 296 (307)
T 3lb7_A 262 --LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIE 296 (307)
T ss_dssp --SCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHH
T ss_pred --hhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHH
Confidence 11233456899999999999999999999999875
No 53
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=1.6e-41 Score=355.21 Aligned_cols=252 Identities=25% Similarity=0.389 Sum_probs=205.6
Q ss_pred cCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEEE
Q 038671 436 NDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVY 514 (707)
Q Consensus 436 ~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 514 (707)
++|++.+.||+|+||.||+|. ..+++.||+|++.............+.+|+++++.++||||+++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 679999999999999999995 4568999999986432223334567889999999999999999999999999999999
Q ss_pred eeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCC
Q 038671 515 EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPD 594 (707)
Q Consensus 515 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 594 (707)
||+.||+|.+++... ..+++..++.++.||+.||+|||+. ||+||||||+||+++.+|.+||+|||++......
T Consensus 95 e~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 168 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQN---VHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE 168 (384)
T ss_dssp CCCTTEEHHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred ecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCC
Confidence 999999999999653 3589999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCccccccccCCCCcccccc---CCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCc
Q 038671 595 SSNWAELAGTYGYVAPELAYT---MKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSH 671 (707)
Q Consensus 595 ~~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (707)
......+||+.|+|||++.+ ..++.++||||||+++|||++|+.||..... .........+.......+..
T Consensus 169 -~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~-----~~~~~~~~~~~~~~~~~p~~ 242 (384)
T 4fr4_A 169 -TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSS-----TSSKEIVHTFETTVVTYPSA 242 (384)
T ss_dssp -CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTT-----SCHHHHHHHHHHCCCCCCTT
T ss_pred -CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCC-----ccHHHHHHHHhhcccCCCCc
Confidence 33456789999999999864 4589999999999999999999999964322 11122222222222222222
Q ss_pred chHHHHHHHHHHHHhccCCCCCCCCC-HHHHHH
Q 038671 672 NVQDKLISIMEVAISCLDESPESRPT-IQKVSQ 703 (707)
Q Consensus 672 ~~~~~~~~l~~li~~cl~~~P~~Rps-~~~l~~ 703 (707)
.+..+.+++.+||+.||.+||+ ++++.+
T Consensus 243 ----~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 243 ----WSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp ----SCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred ----CCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 2345889999999999999998 777654
No 54
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.5e-41 Score=352.59 Aligned_cols=248 Identities=22% Similarity=0.279 Sum_probs=206.4
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIV 513 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 513 (707)
.++|++.+.||+|+||.||+|+. .+|+.||+|++...........+.+.+|+++++.++||||+++++++.+.+..|+|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 36789999999999999999965 57999999998643222223456788999999999999999999999999999999
Q ss_pred EeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCC
Q 038671 514 YEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKP 593 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~ 593 (707)
|||++||+|.+++... ..+++..++.++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++....
T Consensus 120 ~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp EECCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EcCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccC
Confidence 9999999999999643 3589999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCcch
Q 038671 594 DSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHNV 673 (707)
Q Consensus 594 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (707)
. ....+||+.|+|||++.+..++.++||||||+++|||++|+.||.... .......+.......+..
T Consensus 194 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--------~~~~~~~i~~~~~~~p~~-- 260 (350)
T 1rdq_E 194 R---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ--------PIQIYEKIVSGKVRFPSH-- 260 (350)
T ss_dssp C---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCCCCCCTT--
T ss_pred C---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC--------HHHHHHHHHcCCCCCCCC--
Confidence 2 344689999999999999999999999999999999999999996322 122222222223322222
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCC-----HHHHHH
Q 038671 674 QDKLISIMEVAISCLDESPESRPT-----IQKVSQ 703 (707)
Q Consensus 674 ~~~~~~l~~li~~cl~~~P~~Rps-----~~~l~~ 703 (707)
.+.++.+++.+||+.||++||+ ++++++
T Consensus 261 --~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 261 --FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp --CCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred --CCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 2345889999999999999998 888765
No 55
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.1e-41 Score=358.55 Aligned_cols=254 Identities=24% Similarity=0.412 Sum_probs=206.4
Q ss_pred hcCCCCCceeeecCCeeEEEEEcC-CCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIV 513 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 513 (707)
.++|++.+.||+|+||.||+|... +++.||||++.... .....+.+.+|++++++++||||+++++++..++..++|
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 190 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIV 190 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS--CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEE
Confidence 357889999999999999999764 78999999987542 223445788999999999999999999999999999999
Q ss_pred EeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCC
Q 038671 514 YEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKP 593 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~ 593 (707)
|||+++|+|.+++... ...+++..++.++.||+.||+|||++ +++||||||+||+++.++.+||+|||+++....
T Consensus 191 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~ 265 (377)
T 3cbl_A 191 MELVQGGDFLTFLRTE--GARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEAD 265 (377)
T ss_dssp EECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTT
T ss_pred EEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCC
Confidence 9999999999999643 34589999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCC--ccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchhhhhhhhhcCCCCCCCC
Q 038671 594 DSSN--WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNLEIALNEMLDPRLPTPS 670 (707)
Q Consensus 594 ~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (707)
.... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... ......... ..+++.+.
T Consensus 266 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~-----~~~~~~~~~--~~~~~~~~ 338 (377)
T 3cbl_A 266 GVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN-----QQTREFVEK--GGRLPCPE 338 (377)
T ss_dssp SEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH-----HHHHHHHHT--TCCCCCCT
T ss_pred CceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHc--CCCCCCCC
Confidence 2111 112235778999999998889999999999999999998 9999864322 111111111 12233322
Q ss_pred cchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 671 HNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 671 ~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
. .+.++.+++.+||+.||++|||++++++.|+
T Consensus 339 ~----~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~ 370 (377)
T 3cbl_A 339 L----CPDAVFRLMEQCWAYEPGQRPSFSTIYQELQ 370 (377)
T ss_dssp T----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred C----CCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 2 2345889999999999999999999999875
No 56
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=2.4e-41 Score=350.89 Aligned_cols=253 Identities=20% Similarity=0.376 Sum_probs=205.7
Q ss_pred HhcCCCCCceeeecCCeeEEEEEcC-CCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCC----
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHAR---- 508 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~---- 508 (707)
+.++|++.+.||+|+||.||+|+.+ +|+.||||++.... .....+.+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 81 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKW 81 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS--TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC--chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchh
Confidence 4567999999999999999999654 89999999987543 2234577999999999999999999999885543
Q ss_pred -----------------------------------------------------ceeEEEeeeccCcHHHHHhcccccCCC
Q 038671 509 -----------------------------------------------------HSFIVYEYLEMGSLAMILSNDAAAKDL 535 (707)
Q Consensus 509 -----------------------------------------------------~~~lv~e~~~~~~L~~~l~~~~~~~~l 535 (707)
..++||||+++++|.+++.........
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~ 161 (332)
T 3qd2_B 82 QEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDR 161 (332)
T ss_dssp HHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGS
T ss_pred hhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccch
Confidence 379999999999999999876665667
Q ss_pred ChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCC------------Ccccccc
Q 038671 536 GWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSS------------NWAELAG 603 (707)
Q Consensus 536 ~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~------------~~~~~~g 603 (707)
++..++.++.||+.||+|||++ ||+||||||+||+++.++.+||+|||++........ ......|
T Consensus 162 ~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~g 238 (332)
T 3qd2_B 162 EHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVG 238 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-
T ss_pred hhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCC
Confidence 7888999999999999999999 999999999999999999999999999988765421 2234579
Q ss_pred ccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCcchHHHHHHHHHH
Q 038671 604 TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHNVQDKLISIMEV 683 (707)
Q Consensus 604 ~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 683 (707)
|+.|+|||.+.+..++.++||||||+++|||++|..|+.. .............+ ........++.++
T Consensus 239 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~----------~~~~~~~~~~~~~~---~~~~~~~~~~~~l 305 (332)
T 3qd2_B 239 TKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME----------RVRIITDVRNLKFP---LLFTQKYPQEHMM 305 (332)
T ss_dssp CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH----------HHHHHHHHHTTCCC---HHHHHHCHHHHHH
T ss_pred CcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH----------HHHHHHHhhccCCC---cccccCChhHHHH
Confidence 9999999999999999999999999999999999877531 11122222222222 2234455678899
Q ss_pred HHhccCCCCCCCCCHHHHHHH
Q 038671 684 AISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 684 i~~cl~~~P~~Rps~~~l~~~ 704 (707)
+.+||+.||++|||++|+++.
T Consensus 306 i~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 306 VQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHCSSGGGSCCHHHHHHS
T ss_pred HHHHccCCCCcCCCHHHHhhc
Confidence 999999999999999999873
No 57
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.4e-41 Score=347.42 Aligned_cols=258 Identities=26% Similarity=0.432 Sum_probs=198.8
Q ss_pred HhcCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhc--CCCCceeeeeeeeec----C
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTG--IRHRNIVKFYGFCSH----A 507 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~----~ 507 (707)
..++|++.+.||+|+||.||+|+. +++.||||++... ....+..|.+++.. ++||||+++++++.. .
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~ 78 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR------DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSS 78 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG------GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTE
T ss_pred ccCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc------cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCC
Confidence 357899999999999999999977 6899999998532 23445556666555 799999999998644 3
Q ss_pred CceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHH--------hCCCCCeEecCCCCCCeeecCCCC
Q 038671 508 RHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMH--------NDCFPPIVHRDISSKNVLLDLENE 579 (707)
Q Consensus 508 ~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~~~~ivH~dlk~~Nil~~~~~~ 579 (707)
...++||||+++|+|.++++. ..+++..+++++.|++.||+||| +. +|+||||||+||+++.++.
T Consensus 79 ~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~ 151 (301)
T 3q4u_A 79 TQLWLITHYHEMGSLYDYLQL----TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQ 151 (301)
T ss_dssp EEEEEEECCCTTCBHHHHHTT----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSC
T ss_pred ceeEEehhhccCCCHHHHHhh----cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCC
Confidence 468999999999999999953 35899999999999999999999 77 9999999999999999999
Q ss_pred eEEeccccceecCCCCCC----ccccccccCCCCccccccC------CCCccchhHHHHHHHHHHHhC----------CC
Q 038671 580 AHVSDFGTAKFLKPDSSN----WAELAGTYGYVAPELAYTM------KVTEKCDVYSFGVLALEVIKG----------KH 639 (707)
Q Consensus 580 ~kl~Dfg~~~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~slG~~l~el~tg----------~~ 639 (707)
+||+|||++......... .....||+.|+|||.+.+. .++.++||||||+++|||++| +.
T Consensus 152 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~ 231 (301)
T 3q4u_A 152 CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKP 231 (301)
T ss_dssp EEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccc
Confidence 999999999876544322 2334799999999998876 455799999999999999999 77
Q ss_pred CCCcccccccccchhhhh-hhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 640 PRDFISSISSSSSNLEIA-LNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 640 p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
||................ ......+..+. .......+.++.+++.+||+.||++|||+.++++.|+
T Consensus 232 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~ 298 (301)
T 3q4u_A 232 PFYDVVPNDPSFEDMRKVVCVDQQRPNIPN-RWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLT 298 (301)
T ss_dssp TTTTTSCSSCCHHHHHHHHTTSCCCCCCCG-GGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHH
T ss_pred cccccCCCCcchhhhhHHHhccCCCCCCCh-hhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHh
Confidence 775322211111111111 11111112211 1122346678999999999999999999999999885
No 58
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1e-41 Score=351.26 Aligned_cols=250 Identities=24% Similarity=0.338 Sum_probs=187.3
Q ss_pred CceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCC-CCceeeeeeeeecCCceeEEEeeec
Q 038671 441 EHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR-HRNIVKFYGFCSHARHSFIVYEYLE 518 (707)
Q Consensus 441 ~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~ 518 (707)
.+.||+|+||.||+|.. .+++.||||++... ....+.+|+..++.+. ||||+++++++.+++..++||||++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 89 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR------MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLN 89 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccC
Confidence 47899999999999954 57899999998532 3456788999999997 9999999999999999999999999
Q ss_pred cCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCC---CeEEeccccceecCCCC
Q 038671 519 MGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLEN---EAHVSDFGTAKFLKPDS 595 (707)
Q Consensus 519 ~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~---~~kl~Dfg~~~~~~~~~ 595 (707)
+++|.+++... +.+++..++.++.||+.||+|||+. ||+||||||+||+++.++ .+||+|||++.......
T Consensus 90 ~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 163 (325)
T 3kn6_A 90 GGELFERIKKK---KHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN 163 (325)
T ss_dssp SCBHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC--
T ss_pred CCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC
Confidence 99999999653 4589999999999999999999999 999999999999998766 89999999998776655
Q ss_pred CCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCcchHH
Q 038671 596 SNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHNVQD 675 (707)
Q Consensus 596 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (707)
.......||+.|+|||.+.+..++.++||||||+++|+|++|+.||....... ...........+.......+......
T Consensus 164 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~ 242 (325)
T 3kn6_A 164 QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSL-TCTSAVEIMKKIKKGDFSFEGEAWKN 242 (325)
T ss_dssp --------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC--------CCCHHHHHHHHTTTCCCCCSHHHHT
T ss_pred CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCcccc-ccccHHHHHHHHHcCCCCCCcccccC
Confidence 55566788999999999999999999999999999999999999997433211 11222334444555555444444445
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 676 KLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 676 ~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
.+.++.+++.+||+.||++|||++|+++
T Consensus 243 ~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 243 VSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp SCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred CCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 5677999999999999999999999875
No 59
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=2.8e-41 Score=348.49 Aligned_cols=251 Identities=22% Similarity=0.326 Sum_probs=195.9
Q ss_pred hcCCCCCceeeecCCeeEEEEEc----CCCcEEEEEecCCCCCc-hhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCc
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL----PSGEIVAVKKFHSPLPS-EMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARH 509 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~----~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 509 (707)
.++|++.+.||+|+||.||+++. .+|+.||+|++...... .......+.+|+.+++.++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46799999999999999999965 57899999998764321 22234567889999999999999999999999999
Q ss_pred eeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccce
Q 038671 510 SFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAK 589 (707)
Q Consensus 510 ~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~ 589 (707)
.++||||+++++|.+++... ..+++..++.++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 169 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLERE---GIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCK 169 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred EEEEEeCCCCCcHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccc
Confidence 99999999999999998643 3588999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCC
Q 038671 590 FLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTP 669 (707)
Q Consensus 590 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (707)
.............||+.|+|||.+.+..++.++||||||+++|+|++|+.||..... ......+.......+
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------~~~~~~i~~~~~~~p 241 (327)
T 3a62_A 170 ESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR--------KKTIDKILKCKLNLP 241 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHHHTCCCCC
T ss_pred ccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHhCCCCCC
Confidence 655444444556899999999999998899999999999999999999999963221 122222222222222
Q ss_pred CcchHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 038671 670 SHNVQDKLISIMEVAISCLDESPESRP-----TIQKVSQ 703 (707)
Q Consensus 670 ~~~~~~~~~~l~~li~~cl~~~P~~Rp-----s~~~l~~ 703 (707)
.. .+.++.+++.+||+.||++|| ++.++++
T Consensus 242 ~~----~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 242 PY----LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp TT----SCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred CC----CCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 22 234588999999999999999 7778765
No 60
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=2.8e-41 Score=354.37 Aligned_cols=254 Identities=25% Similarity=0.458 Sum_probs=195.9
Q ss_pred hcCCCCCceeeecCCeeEEEEEcC----CCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCce
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAELP----SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHS 510 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 510 (707)
.++|++.+.||+|+||.||+|+.. ++..||||++.... .....+.+.+|++++++++||||+++++++.+.+..
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 121 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV 121 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCce
Confidence 357999999999999999999754 57789999987543 233557799999999999999999999999999999
Q ss_pred eEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEecccccee
Q 038671 511 FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKF 590 (707)
Q Consensus 511 ~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~ 590 (707)
++||||+++++|.++++.. ...+++..++.++.||++||+|||+. ||+||||||+||+++.++.+||+|||+++.
T Consensus 122 ~lv~e~~~~~sL~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 122 MIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRV 196 (373)
T ss_dssp EEEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccc
Confidence 9999999999999999653 34589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC---ccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchhhhhhhhhcCCCC
Q 038671 591 LKPDSSN---WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNLEIALNEMLDPRL 666 (707)
Q Consensus 591 ~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (707)
....... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... .......... .+.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~-----~~~~~~i~~~--~~~ 269 (373)
T 2qol_A 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-----QDVIKAVDEG--YRL 269 (373)
T ss_dssp -----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH-----HHHHHHHHTT--EEC
T ss_pred cccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHcC--CCC
Confidence 6543221 122235678999999999999999999999999999998 9999863221 1111111111 112
Q ss_pred CCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 667 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
+.+. ..+.++.+++.+||+.||++||++.++++.|+
T Consensus 270 ~~~~----~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~ 305 (373)
T 2qol_A 270 PPPM----DCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305 (373)
T ss_dssp CCCT----TCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCc----cccHHHHHHHHHHhCcChhhCcCHHHHHHHHH
Confidence 2221 23456899999999999999999999999874
No 61
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-41 Score=354.38 Aligned_cols=253 Identities=19% Similarity=0.285 Sum_probs=207.1
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIV 513 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 513 (707)
.++|++.+.||+|+||.||+|.. .+|+.||+|++.... ......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~---~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 126 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY---PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLI 126 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc---hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEE
Confidence 46799999999999999999954 578999999987542 22345788999999999999999999999999999999
Q ss_pred EeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecC--CCCeEEeccccceec
Q 038671 514 YEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDL--ENEAHVSDFGTAKFL 591 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~--~~~~kl~Dfg~~~~~ 591 (707)
|||+.+++|.+++... ...+++..++.++.||+.||+|||+. ||+||||||+||+++. ++.+||+|||++...
T Consensus 127 ~E~~~gg~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~ 201 (387)
T 1kob_A 127 LEFLSGGELFDRIAAE--DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKL 201 (387)
T ss_dssp EECCCCCBHHHHTTCT--TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEEC
T ss_pred EEcCCCCcHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceec
Confidence 9999999999998643 24589999999999999999999999 9999999999999974 468999999999876
Q ss_pred CCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCc
Q 038671 592 KPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSH 671 (707)
Q Consensus 592 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (707)
.... ......||+.|+|||++.+..++.++||||||+++|+|++|+.||..... ......+.......+..
T Consensus 202 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~--------~~~~~~i~~~~~~~~~~ 272 (387)
T 1kob_A 202 NPDE-IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD--------LETLQNVKRCDWEFDED 272 (387)
T ss_dssp CTTS-CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--------HHHHHHHHHCCCCCCSS
T ss_pred CCCc-ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCCCCCcc
Confidence 5432 33445799999999999998899999999999999999999999964221 11112222112211111
Q ss_pred chHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 672 NVQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 672 ~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
.....+.++.+++.+||+.||++|||+.|+++.
T Consensus 273 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 273 AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 222334568999999999999999999999863
No 62
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=2e-41 Score=341.89 Aligned_cols=252 Identities=26% Similarity=0.399 Sum_probs=185.0
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIV 513 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 513 (707)
.++|++.+.||+|+||.||+|.. .+|+.||+|++...........+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 46799999999999999999964 67999999998543222222346789999999999999999999999999999999
Q ss_pred EeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCC
Q 038671 514 YEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKP 593 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~ 593 (707)
|||+++++|.+++... ...+++..++.++.|+++||+|||+. |++||||||+||+++.++.+||+|||.+.....
T Consensus 90 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 164 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNR--VKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKM 164 (278)
T ss_dssp EECCTTEEHHHHHHTC--SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred EecCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence 9999999999999643 34689999999999999999999999 999999999999999999999999999987664
Q ss_pred CCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCcch
Q 038671 594 DSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHNV 673 (707)
Q Consensus 594 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (707)
.........|++.|+|||.+.+..++.++||||||+++|+|++|+.||...... .............+.
T Consensus 165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~--- 233 (278)
T 3cok_A 165 PHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVK--------NTLNKVVLADYEMPS--- 233 (278)
T ss_dssp ---------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------------CCSSCCCCCT---
T ss_pred CCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHH--------HHHHHHhhcccCCcc---
Confidence 444444567899999999999888999999999999999999999999642211 111111111222221
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 674 QDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 674 ~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
..+.++.+++.+||+.||++||+++++++
T Consensus 234 -~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 234 -FLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp -TSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -ccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 12345889999999999999999999986
No 63
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=4.3e-41 Score=364.93 Aligned_cols=332 Identities=23% Similarity=0.232 Sum_probs=289.8
Q ss_pred CCCceeeccCCeeeecCCccccCCCCCCeEECCCCcccc-ccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeee
Q 038671 3 SNLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCG-SIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLT 81 (707)
Q Consensus 3 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~-~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 81 (707)
++|++|+|++|.|++..|..|+++++|++|+|++|.+.+ ..+..|.++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 579999999999999989999999999999999999974 4567899999999999999999988899999999999999
Q ss_pred ccccccccc-CC--CCCCCCCccEEEeccCccccccCcc-ccCCCCCcEEEcccccccccCCCCCCCC--CCCcEEEcCC
Q 038671 82 LENNQLRGP-IP--NLRNLTSLVRVRLNQNHLTGNISES-FGIHPNLAFIDLSHNYFYGEISSDWGRC--PKLGTLDFSS 155 (707)
Q Consensus 82 l~~n~i~~~-~~--~l~~l~~L~~L~l~~n~l~~~~~~~-~~~~~~L~~L~L~~n~i~~~~~~~~~~~--~~L~~L~L~~ 155 (707)
+++|.+++. +. .+..+++|++|++++|+++.+.+.. +..+++|++|++++|.+++..+..+..+ ++|+.|++++
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 999999862 33 3899999999999999999886665 8999999999999999998888777765 5677777777
Q ss_pred CccCCCCchh--------hhCCCCCCEEeCCCCCCCCCCChhhhC-----------------------------------
Q 038671 156 NNITGSMPAE--------IIHSSQLKVLDLSSNHIVGEMPSKLGK----------------------------------- 192 (707)
Q Consensus 156 n~i~~~~~~~--------~~~~~~L~~L~l~~n~l~~~~~~~~~~----------------------------------- 192 (707)
|.+.+..+.. +..+++|+.|++++|.+++..+..+..
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~ 269 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTF 269 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTT
T ss_pred CcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCccccc
Confidence 7776544332 224566777777777665433333221
Q ss_pred ----CCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccccCcccCceEeeecccccccCchhhhhcccC
Q 038671 193 ----LSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPVELEKLIHL 268 (707)
Q Consensus 193 ----l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 268 (707)
.++|++|++++|.+++..+..+..+++|++|+|++|.+++..+..|.++++|++|+|++|.+++..+..+..+++|
T Consensus 270 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 349 (455)
T 3v47_A 270 KGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKL 349 (455)
T ss_dssp GGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTC
T ss_pred ccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccC
Confidence 2689999999999998889999999999999999999998889999999999999999999998889999999999
Q ss_pred CeeeecCccCCCCCCcccccccccceEeccccccCCchhHhhccCCCceeEeeccCcccccCCCcc
Q 038671 269 SELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDISYNELHGSIPNST 334 (707)
Q Consensus 269 ~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~ 334 (707)
++|+|++|.+++..|..+..+++|+.|++++|++++..+..+..+++|+.|++++|+|+|.+|...
T Consensus 350 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 415 (455)
T 3v47_A 350 EVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 415 (455)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTH
T ss_pred CEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCcch
Confidence 999999999988889999999999999999999998877888999999999999999999998654
No 64
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=3.6e-41 Score=342.54 Aligned_cols=258 Identities=20% Similarity=0.287 Sum_probs=201.9
Q ss_pred cCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEEE
Q 038671 436 NDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVY 514 (707)
Q Consensus 436 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 514 (707)
++|++.+.||+|+||+||+|.. .+|+.||+|++...... ......+.+|++++++++||||+++++++.+++..++||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD-EGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSS-TTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCc-CCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEE
Confidence 5789999999999999999954 57899999999765432 234567889999999999999999999999999999999
Q ss_pred eeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCC
Q 038671 515 EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPD 594 (707)
Q Consensus 515 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 594 (707)
||++++.+..+... ...+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++......
T Consensus 81 e~~~~~l~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 154 (292)
T 3o0g_A 81 EFCDQDLKKYFDSC---NGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp ECCSEEHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred ecCCCCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence 99987555544432 24589999999999999999999999 9999999999999999999999999999887655
Q ss_pred CCCccccccccCCCCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCC---------
Q 038671 595 SSNWAELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDP--------- 664 (707)
Q Consensus 595 ~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~--------- 664 (707)
........||+.|+|||.+.+.. ++.++||||+|+++|+|++|..||...... .............+
T Consensus 155 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~ 231 (292)
T 3o0g_A 155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV---DDQLKRIFRLLGTPTEEQWPSMT 231 (292)
T ss_dssp CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSH---HHHHHHHHHHHCCCCTTTCTTGG
T ss_pred cccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCH---HHHHHHHHHHhCCCChhhhhhhc
Confidence 55555668899999999988766 799999999999999999988885321110 00011111000000
Q ss_pred ---------C---CCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 665 ---------R---LPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 665 ---------~---~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
. ........+..+.++.+++.+|++.||++|||++|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp GSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0 00001111233456889999999999999999999986
No 65
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1e-41 Score=356.22 Aligned_cols=247 Identities=22% Similarity=0.281 Sum_probs=195.5
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHH-HhcCCCCceeeeeeeeecCCceeE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKT-LTGIRHRNIVKFYGFCSHARHSFI 512 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~l 512 (707)
.++|++.+.||+|+||.||+|+. .+++.||+|++.............+..|..+ ++.++||||+++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 36799999999999999999965 4688999999875433333344556677776 567899999999999999999999
Q ss_pred EEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecC
Q 038671 513 VYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLK 592 (707)
Q Consensus 513 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~ 592 (707)
||||+.||+|.+++... +.+++..++.++.||+.||+|||++ ||+||||||+||+++.+|.+||+|||+++...
T Consensus 117 v~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~ 190 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRE---RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENI 190 (373)
T ss_dssp EEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGB
T ss_pred EEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccc
Confidence 99999999999998643 4589999999999999999999999 99999999999999999999999999998755
Q ss_pred CCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCcc
Q 038671 593 PDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHN 672 (707)
Q Consensus 593 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (707)
.........+||+.|+|||++.+..++.++|+||||+++|||++|+.||.... .......+.......+..
T Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~--------~~~~~~~i~~~~~~~~~~- 261 (373)
T 2r5t_A 191 EHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN--------TAEMYDNILNKPLQLKPN- 261 (373)
T ss_dssp CCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSB--------HHHHHHHHHHSCCCCCSS-
T ss_pred cCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC--------HHHHHHHHHhcccCCCCC-
Confidence 44455566789999999999999999999999999999999999999996322 122222222222222222
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHH
Q 038671 673 VQDKLISIMEVAISCLDESPESRPTIQ 699 (707)
Q Consensus 673 ~~~~~~~l~~li~~cl~~~P~~Rps~~ 699 (707)
.+.++.+++.+||+.||++||++.
T Consensus 262 ---~~~~~~~li~~lL~~dp~~R~~~~ 285 (373)
T 2r5t_A 262 ---ITNSARHLLEGLLQKDRTKRLGAK 285 (373)
T ss_dssp ---SCHHHHHHHHHHTCSSGGGSTTTT
T ss_pred ---CCHHHHHHHHHHcccCHHhCCCCC
Confidence 234588999999999999999985
No 66
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.9e-41 Score=339.16 Aligned_cols=248 Identities=22% Similarity=0.324 Sum_probs=182.1
Q ss_pred cCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEEE
Q 038671 436 NDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVY 514 (707)
Q Consensus 436 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 514 (707)
++|++.+.||+|+||.||+|.. .+|+.||+|++...........+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 6799999999999999999964 578999999997655444445678899999999999999999999999999999999
Q ss_pred eeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCC
Q 038671 515 EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPD 594 (707)
Q Consensus 515 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 594 (707)
||+ ++++.+++... ..+++..++.++.|++.||+|||+. |++||||||+||+++.++.+||+|||++......
T Consensus 93 e~~-~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 165 (275)
T 2eue_A 93 EYA-GNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp ECC-CEEHHHHHHTS---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC------
T ss_pred hhc-CCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccCc
Confidence 999 66777777543 3589999999999999999999999 9999999999999999999999999999765533
Q ss_pred CCCccccccccCCCCccccccCCC-CccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCcch
Q 038671 595 SSNWAELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHNV 673 (707)
Q Consensus 595 ~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (707)
. ......||+.|+|||.+.+..+ +.++||||+|+++|+|++|+.||+... .......+.......+..
T Consensus 166 ~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~~~~~~~~~~~~~~~~~~-- 234 (275)
T 2eue_A 166 N-FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES--------IPVLFKNISNGVYTLPKF-- 234 (275)
T ss_dssp ----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHTCCCCCTT--
T ss_pred c-cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCCCCCCcc--
Confidence 2 2344578999999999987765 789999999999999999999996322 112222222222222222
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 674 QDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 674 ~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
.+..+.+++.+||+.||++|||++|+++
T Consensus 235 --~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 235 --LSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp --SCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred --CCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 2345889999999999999999999976
No 67
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=2.7e-41 Score=342.58 Aligned_cols=258 Identities=23% Similarity=0.346 Sum_probs=199.8
Q ss_pred cCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEEEe
Q 038671 436 NDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYE 515 (707)
Q Consensus 436 ~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 515 (707)
++|++.+.||+|+||.||+|+..+|+.||+|++...... ....+.+.+|++++++++||||+++++++..++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKED-EGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE 80 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGG-GCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccc-cccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEE
Confidence 578999999999999999998888999999998754322 2234668899999999999999999999999999999999
Q ss_pred eeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCC
Q 038671 516 YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDS 595 (707)
Q Consensus 516 ~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~ 595 (707)
|+++ +|.+++... ...+++..++.++.||+.||+|||++ ||+||||||+||+++.++.+||+|||++.......
T Consensus 81 ~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 81 HLDQ-DLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp CCSE-EHHHHHHTS--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred ecCC-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence 9985 888888643 24589999999999999999999999 99999999999999999999999999998765444
Q ss_pred CCccccccccCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhh--------------
Q 038671 596 SNWAELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNE-------------- 660 (707)
Q Consensus 596 ~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~-------------- 660 (707)
.......||+.|+|||.+.+. .++.++||||+|+++|+|++|+.||....... ........
T Consensus 155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
T 1ob3_A 155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD----QLMRIFRILGTPNSKNWPNVTE 230 (288)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHHHHCCCCTTTSTTGGG
T ss_pred cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHHCCCChhhchhhhc
Confidence 444556789999999998764 58999999999999999999999996432211 01111000
Q ss_pred --hcCCCCCCC-----CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 661 --MLDPRLPTP-----SHNVQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 661 --~~~~~~~~~-----~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
..++..... .......+.++.+++.+||+.||++|||++|+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 231 LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp STTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 001111100 00011234568899999999999999999999863
No 68
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=4e-41 Score=361.70 Aligned_cols=250 Identities=24% Similarity=0.365 Sum_probs=207.8
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIV 513 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 513 (707)
.++|.+.+.||+|+||.||+|+. .+|+.||||++.............+.+|+++++.++||||+++++++...+..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 36799999999999999999965 47999999998643222222356789999999999999999999999999999999
Q ss_pred EeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCC
Q 038671 514 YEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKP 593 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~ 593 (707)
|||+++++|.+++... ..+++..++.++.||+.||+|||+. ||+||||||+||+++.++.+||+|||++.....
T Consensus 95 ~E~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 95 MEYVSGGELFDYICKN---GRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168 (476)
T ss_dssp EECCSSEEHHHHTTSS---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred EeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence 9999999999998643 4589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCccccccccCCCCccccccCCC-CccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCcc
Q 038671 594 DSSNWAELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHN 672 (707)
Q Consensus 594 ~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (707)
. ......+||+.|+|||.+.+..+ +.++||||+|+++|+|++|+.||+... .......+.+.....+...
T Consensus 169 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~--------~~~~~~~i~~~~~~~p~~~ 239 (476)
T 2y94_A 169 G-EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH--------VPTLFKKICDGIFYTPQYL 239 (476)
T ss_dssp T-CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS--------SHHHHHHHHTTCCCCCTTC
T ss_pred c-ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC--------HHHHHHHHhcCCcCCCccC
Confidence 3 33455689999999999988766 689999999999999999999996322 1222333333333333222
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 673 VQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 673 ~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
+.++.+++.+||+.||++|||++|+++
T Consensus 240 ----s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 240 ----NPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp ----CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ----CHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 345889999999999999999999986
No 69
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=4.8e-42 Score=352.17 Aligned_cols=256 Identities=26% Similarity=0.411 Sum_probs=199.0
Q ss_pred HhcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCce--
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHS-- 510 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~-- 510 (707)
+.++|++.+.||+|+||.||+|+ ..+++.||+|++.............+.+|++.+++++||||+++++++......
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 89 (311)
T 3ork_A 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP 89 (311)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred ecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence 35789999999999999999996 467999999999876555555567899999999999999999999998765543
Q ss_pred --eEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccc
Q 038671 511 --FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTA 588 (707)
Q Consensus 511 --~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~ 588 (707)
++||||+++++|.+++... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a 163 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHTE---GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIA 163 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred ccEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence 9999999999999999643 3589999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCC---CccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCC
Q 038671 589 KFLKPDSS---NWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPR 665 (707)
Q Consensus 589 ~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (707)
........ ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||..... ............
T Consensus 164 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~-------~~~~~~~~~~~~ 236 (311)
T 3ork_A 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP-------VSVAYQHVREDP 236 (311)
T ss_dssp ------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-------HHHHHHHHHCCC
T ss_pred ccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh-------HHHHHHHhcCCC
Confidence 87654322 22345689999999999999999999999999999999999999964221 111111111111
Q ss_pred CCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 666 LPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 666 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
.+ +.......+.++.+++.+||+.||++||++.++++
T Consensus 237 ~~-~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~ 273 (311)
T 3ork_A 237 IP-PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMR 273 (311)
T ss_dssp CC-HHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHH
T ss_pred CC-cccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHH
Confidence 11 11111123456899999999999999998777654
No 70
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.6e-40 Score=362.36 Aligned_cols=348 Identities=20% Similarity=0.203 Sum_probs=314.1
Q ss_pred ceeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeecccc
Q 038671 6 AFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLENN 85 (707)
Q Consensus 6 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n 85 (707)
+.++.++++++ .+|..+. +++++|+|++|++++..+..|.++++|++|+|++|.|++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 57889999999 7787665 59999999999999888899999999999999999999999999999999999999999
Q ss_pred cccccCCC-CCCCCCccEEEeccCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccCCCCch
Q 038671 86 QLRGPIPN-LRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGSMPA 164 (707)
Q Consensus 86 ~i~~~~~~-l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~ 164 (707)
.++.+++. |.++++|++|+|++|+++.+.+..|..+++|++|+|++|.++.+.+..|..+++|++|+|++|.+++..+.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 99988775 78999999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred hhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccccCcccC
Q 038671 165 EIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKL 244 (707)
Q Consensus 165 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L 244 (707)
.+..+++|+.|+|++|.+.+..+..|..+++|++|++++|...+..+.......+|++|+|++|.+++..+..|..+++|
T Consensus 171 ~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L 250 (477)
T 2id5_A 171 ALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYL 250 (477)
T ss_dssp HHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTC
T ss_pred HhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCcccc
Confidence 89999999999999999998888899999999999999998877777777777899999999999997777889999999
Q ss_pred ceEeeecccccccCchhhhhcccCCeeeecCccCCCCCCcccccccccceEeccccccCCchhHhhccCCCceeEeeccC
Q 038671 245 HYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDISYN 324 (707)
Q Consensus 245 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~l~~n 324 (707)
+.|+|++|.+++..+..|..+++|++|+|++|.+++..+..|..+++|+.|++++|+|++..+..|..+++|+.|++++|
T Consensus 251 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 330 (477)
T 2id5_A 251 RFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSN 330 (477)
T ss_dssp CEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSS
T ss_pred CeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCC
Confidence 99999999999888888999999999999999999988999999999999999999999988888999999999999999
Q ss_pred cccccCCCccccccCchhhcccCcCcCCCCCC
Q 038671 325 ELHGSIPNSTAFRDAPMEALQGNKGLCGDIKG 356 (707)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 356 (707)
+|.|.++..-.........+.++...|..+..
T Consensus 331 ~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p~~ 362 (477)
T 2id5_A 331 PLACDCRLLWVFRRRWRLNFNRQQPTCATPEF 362 (477)
T ss_dssp CEECSGGGHHHHTTTTSSCCTTCCCBEEESGG
T ss_pred CccCccchHhHHhhhhccccCccCceeCCchH
Confidence 99998865332222222334555666655443
No 71
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.8e-41 Score=349.44 Aligned_cols=263 Identities=26% Similarity=0.365 Sum_probs=203.6
Q ss_pred hcCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCC----ce
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHAR----HS 510 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~~ 510 (707)
.++|++.+.||+|+||.||+|+.. ++.||||++... ........+|+..+++++||||+++++++.... ..
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 97 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQ----DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDL 97 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecC----chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceE
Confidence 367999999999999999999775 789999998542 223445667999999999999999999997754 36
Q ss_pred eEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCC-------CCCeEecCCCCCCeeecCCCCeEEe
Q 038671 511 FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDC-------FPPIVHRDISSKNVLLDLENEAHVS 583 (707)
Q Consensus 511 ~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-------~~~ivH~dlk~~Nil~~~~~~~kl~ 583 (707)
++||||+++|+|.++++. ..+++..++.++.|++.||+|||+.+ .++|+||||||+||+++.++.+||+
T Consensus 98 ~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~ 173 (322)
T 3soc_A 98 WLITAFHEKGSLSDFLKA----NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIA 173 (322)
T ss_dssp EEEEECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEEecCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEc
Confidence 999999999999999964 34899999999999999999999761 2389999999999999999999999
Q ss_pred ccccceecCCCCC--CccccccccCCCCcccccc-----CCCCccchhHHHHHHHHHHHhCCCCCCcccccccc------
Q 038671 584 DFGTAKFLKPDSS--NWAELAGTYGYVAPELAYT-----MKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSS------ 650 (707)
Q Consensus 584 Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~------ 650 (707)
|||+++....... ......||+.|+|||.+.+ ..++.++||||||+++|||+||+.||.........
T Consensus 174 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 253 (322)
T 3soc_A 174 DFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEI 253 (322)
T ss_dssp CCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHH
T ss_pred cCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhh
Confidence 9999987654432 2334579999999999886 34667899999999999999999998643221100
Q ss_pred --cchhhhhhhhhcCCCC-CCCCc--chHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 651 --SSNLEIALNEMLDPRL-PTPSH--NVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 651 --~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
................ +.... .....+.++.+++.+||+.||++|||+.|+++.|+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~ 314 (322)
T 3soc_A 254 GQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERIT 314 (322)
T ss_dssp CSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 0011111111111111 11111 12245567999999999999999999999999885
No 72
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.6e-41 Score=342.23 Aligned_cols=252 Identities=22% Similarity=0.333 Sum_probs=198.1
Q ss_pred hcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCch-----------------------hhhHHHHHHHHHHHh
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSE-----------------------MASQQEFLNEVKTLT 490 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~-----------------------~~~~~~~~~e~~~l~ 490 (707)
.++|++.+.||+|+||.||+|. ..+++.||+|++....... ....+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 4689999999999999999995 4578999999986543211 112356889999999
Q ss_pred cCCCCceeeeeeeeec--CCceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCC
Q 038671 491 GIRHRNIVKFYGFCSH--ARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDIS 568 (707)
Q Consensus 491 ~l~h~niv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk 568 (707)
+++||||+++++++.+ .+..++||||+++++|.++.. ...+++..++.++.||+.||+|||+. ||+|||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlk 164 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT----LKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIK 164 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC----SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCC
Confidence 9999999999999976 567899999999999987643 24689999999999999999999999 99999999
Q ss_pred CCCeeecCCCCeEEeccccceecCCCCCCccccccccCCCCccccccCC---CCccchhHHHHHHHHHHHhCCCCCCccc
Q 038671 569 SKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMK---VTEKCDVYSFGVLALEVIKGKHPRDFIS 645 (707)
Q Consensus 569 ~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~---~~~~~Dv~slG~~l~el~tg~~p~~~~~ 645 (707)
|+||+++.++.+||+|||++..............||+.|+|||.+.+.. ++.++||||||+++|+|++|+.||....
T Consensus 165 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 165 PSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp GGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 9999999999999999999988765544445568999999999988765 3778999999999999999999996321
Q ss_pred ccccccchhhhhhhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 646 SISSSSSNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
. ......+.......+. ....+.++.+++.+||+.||++||+++|+++
T Consensus 245 ~--------~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 245 I--------MCLHSKIKSQALEFPD--QPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp H--------HHHHHHHHHCCCCCCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred H--------HHHHHHHhcccCCCCC--ccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 1 1111111111111110 1123345899999999999999999999976
No 73
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=9e-41 Score=340.06 Aligned_cols=252 Identities=23% Similarity=0.345 Sum_probs=210.8
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIV 513 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 513 (707)
.++|++.+.||+|+||.||+|.. .+++.+|+|++...........+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 46799999999999999999965 46889999998654434445567889999999999999999999999999999999
Q ss_pred EeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCC
Q 038671 514 YEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKP 593 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~ 593 (707)
|||+++++|.+++... ..+++..++.++.|++.||+|||+. |++||||||+||+++.++.+||+|||.+.....
T Consensus 94 ~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 167 (294)
T 2rku_A 94 LELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 167 (294)
T ss_dssp EECCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceeccc
Confidence 9999999999988543 4589999999999999999999999 999999999999999999999999999988765
Q ss_pred CCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCcch
Q 038671 594 DSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHNV 673 (707)
Q Consensus 594 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (707)
.........|++.|+|||.+.+..++.++||||||+++|+|++|+.||+.... ..............+..
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~-- 237 (294)
T 2rku_A 168 DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL--------KETYLRIKKNEYSIPKH-- 237 (294)
T ss_dssp TTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHHTTCCCCCTT--
T ss_pred CccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHhhccCCCccc--
Confidence 54545556899999999999988899999999999999999999999963221 11122222222222222
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 674 QDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 674 ~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
.+..+.+++.+||+.||++||+++|+++.
T Consensus 238 --~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 238 --INPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp --SCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred --cCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 23458899999999999999999998863
No 74
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=5.1e-41 Score=339.93 Aligned_cols=252 Identities=25% Similarity=0.426 Sum_probs=204.3
Q ss_pred hcCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVY 514 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 514 (707)
.++|++.+.||+|+||.||+++..+++.||+|++..... ..+++.+|++++++++||||+++++++.+.+..++||
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM----SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIIT 98 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC----CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEE
Confidence 467899999999999999999988888999999975432 2356889999999999999999999999999999999
Q ss_pred eeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCC
Q 038671 515 EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPD 594 (707)
Q Consensus 515 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 594 (707)
||+.+++|.+++... ...+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+......
T Consensus 99 e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 173 (283)
T 3gen_A 99 EYMANGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 173 (283)
T ss_dssp CCCTTCBHHHHHHCG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCH
T ss_pred eccCCCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccccc
Confidence 999999999999653 34589999999999999999999999 9999999999999999999999999999865432
Q ss_pred C-CCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchhhhhhhhhcCCCCCCCCcc
Q 038671 595 S-SNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHN 672 (707)
Q Consensus 595 ~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (707)
. .......+++.|+|||.+.+..++.++||||+|+++|+|++ |+.||..... ............... +..
T Consensus 174 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~-----~~~~~~~~~~~~~~~--~~~- 245 (283)
T 3gen_A 174 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN-----SETAEHIAQGLRLYR--PHL- 245 (283)
T ss_dssp HHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCH-----HHHHHHHHTTCCCCC--CTT-
T ss_pred ccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccCh-----hHHHHHHhcccCCCC--CCc-
Confidence 1 11223456788999999998889999999999999999998 9999964322 111111111111111 111
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 673 VQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 673 ~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
.+..+.+++.+||+.||++|||++++++.|+
T Consensus 246 ---~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~ 276 (283)
T 3gen_A 246 ---ASEKVYTIMYSCWHEKADERPTFKILLSNIL 276 (283)
T ss_dssp ---CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHccCChhHCcCHHHHHHHHH
Confidence 1345889999999999999999999999874
No 75
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=2.3e-41 Score=350.34 Aligned_cols=253 Identities=21% Similarity=0.284 Sum_probs=205.2
Q ss_pred HHhcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcC-CCCceeeeeeeeecCCce
Q 038671 433 RVTNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGFCSHARHS 510 (707)
Q Consensus 433 ~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 510 (707)
.+.++|++.+.||+|+||.||+|.. .+|+.||+|++...... ..+|++++.++ +||||+++++++.+++..
T Consensus 19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~ 91 (342)
T 2qr7_A 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD-------PTEEIEILLRYGQHPNIITLKDVYDDGKYV 91 (342)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC-------CHHHHHHHHHHTTSTTBCCEEEEEECSSEE
T ss_pred CccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC-------hHHHHHHHHHhcCCCCcCeEEEEEEcCCEE
Confidence 3567899999999999999999954 57899999998754322 24577778777 799999999999999999
Q ss_pred eEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCC-C---CeEEeccc
Q 038671 511 FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLE-N---EAHVSDFG 586 (707)
Q Consensus 511 ~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~-~---~~kl~Dfg 586 (707)
|+||||+.||+|.+++... +.+++..++.++.||+.||+|||++ ||+||||||+||++..+ + .+||+|||
T Consensus 92 ~lv~E~~~gg~L~~~i~~~---~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg 165 (342)
T 2qr7_A 92 YVVTELMKGGELLDKILRQ---KFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFG 165 (342)
T ss_dssp EEEECCCCSCBHHHHHHTC---TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCT
T ss_pred EEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECC
Confidence 9999999999999998653 3589999999999999999999999 99999999999998543 3 59999999
Q ss_pred cceecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCC
Q 038671 587 TAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRL 666 (707)
Q Consensus 587 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (707)
++.............+||+.|+|||++.+..++.++||||||+++|+|++|+.||..... .........+.....
T Consensus 166 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~~~~~~i~~~~~ 240 (342)
T 2qr7_A 166 FAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD-----DTPEEILARIGSGKF 240 (342)
T ss_dssp TCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTT-----SCHHHHHHHHHHCCC
T ss_pred CcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCc-----CCHHHHHHHHccCCc
Confidence 999876655555667899999999999888899999999999999999999999963211 122222333333333
Q ss_pred CCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 667 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
..+.......+.++.+++.+||+.||++||++.++++
T Consensus 241 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 241 SLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp CCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred ccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 3222222334456899999999999999999999876
No 76
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=2.9e-41 Score=351.28 Aligned_cols=252 Identities=20% Similarity=0.313 Sum_probs=192.0
Q ss_pred HhcCCCCCceeeecCCeeEEEEEcC-CCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeE
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFI 512 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 512 (707)
+.++|++.+.||+|+||.||+|+.. +++.||+|++.... ..+.+.+|++++++++||||+++++++...+..++
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 125 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISL 125 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC---------------CHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEE
Confidence 4578999999999999999999654 68899999987532 33567889999999999999999999999999999
Q ss_pred EEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecC---CCCeEEeccccce
Q 038671 513 VYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDL---ENEAHVSDFGTAK 589 (707)
Q Consensus 513 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~---~~~~kl~Dfg~~~ 589 (707)
||||+++++|.+++... ..+++..++.++.||+.||+|||+. ||+||||||+||+++. ++.+||+|||+++
T Consensus 126 v~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~ 199 (349)
T 2w4o_A 126 VLELVTGGELFDRIVEK---GYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSK 199 (349)
T ss_dssp EECCCCSCBHHHHHTTC---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC---
T ss_pred EEEeCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCcccc
Confidence 99999999999998643 3589999999999999999999999 9999999999999975 8899999999998
Q ss_pred ecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCC
Q 038671 590 FLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTP 669 (707)
Q Consensus 590 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (707)
..... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||..... .......+.......+
T Consensus 200 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-------~~~~~~~i~~~~~~~~ 271 (349)
T 2w4o_A 200 IVEHQ-VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERG-------DQFMFRRILNCEYYFI 271 (349)
T ss_dssp --------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTC-------HHHHHHHHHTTCCCCC
T ss_pred ccCcc-cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcc-------cHHHHHHHHhCCCccC
Confidence 65432 223446789999999999998999999999999999999999999863221 1112222223222222
Q ss_pred CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 670 SHNVQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 670 ~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
.......+.++.+++.+||+.||++|||+.|+++.
T Consensus 272 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 272 SPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 22222344568999999999999999999999863
No 77
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=6.7e-41 Score=336.78 Aligned_cols=251 Identities=28% Similarity=0.465 Sum_probs=193.7
Q ss_pred hcCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCch-hhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSE-MASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIV 513 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 513 (707)
.++|++.+.||+|+||.||+|... ++.||+|++....... ....+.+.+|+++++.++||||+++++++..++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 357899999999999999999874 8899999987543222 22346788999999999999999999999999999999
Q ss_pred EeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCC---eEecCCCCCCeeecC--------CCCeEE
Q 038671 514 YEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPP---IVHRDISSKNVLLDL--------ENEAHV 582 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~---ivH~dlk~~Nil~~~--------~~~~kl 582 (707)
|||+++++|.+++.. +.+++..++.++.|++.||+|||++ + |+||||||+||+++. ++.+||
T Consensus 85 ~e~~~~~~L~~~~~~----~~~~~~~~~~i~~~l~~~l~~lH~~---~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl 157 (271)
T 3dtc_A 85 MEFARGGPLNRVLSG----KRIPPDILVNWAVQIARGMNYLHDE---AIVPIIHRDLKSSNILILQKVENGDLSNKILKI 157 (271)
T ss_dssp EECCTTEEHHHHHTS----SCCCHHHHHHHHHHHHHHHHHHHHS---SSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEE
T ss_pred EEcCCCCCHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CCCceeecCCchHHEEEecccccccccCcceEE
Confidence 999999999999853 3589999999999999999999999 7 999999999999986 678999
Q ss_pred eccccceecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhc
Q 038671 583 SDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEML 662 (707)
Q Consensus 583 ~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 662 (707)
+|||.+........ ....|++.|+|||.+.+..++.++||||||+++|+|++|+.||..... .........
T Consensus 158 ~Dfg~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-------~~~~~~~~~ 228 (271)
T 3dtc_A 158 TDFGLAREWHRTTK--MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDG-------LAVAYGVAM 228 (271)
T ss_dssp CCCCC---------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCH-------HHHHHHHHT
T ss_pred ccCCcccccccccc--cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHhhhc
Confidence 99999986553322 345789999999999998899999999999999999999999964221 111111111
Q ss_pred -CCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 663 -DPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 663 -~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
....+.+. ..+..+.+++.+||+.||++|||+.|+++.|+
T Consensus 229 ~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~ 269 (271)
T 3dtc_A 229 NKLALPIPS----TCPEPFAKLMEDCWNPDPHSRPSFTNILDQLT 269 (271)
T ss_dssp SCCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCCCCc----ccCHHHHHHHHHHhcCCcccCcCHHHHHHHHh
Confidence 11112121 22345899999999999999999999999885
No 78
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=8.3e-42 Score=368.10 Aligned_cols=251 Identities=23% Similarity=0.300 Sum_probs=197.3
Q ss_pred hcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIV 513 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 513 (707)
.++|++.+.||+|+||.||+|. ..+|+.||+|++.............+.+|+++++.++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 4679999999999999999995 567999999998643222223345678899999999999999999999999999999
Q ss_pred EeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCCCeeecCCCCeEEeccccceecC
Q 038671 514 YEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHN-DCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLK 592 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~ 592 (707)
|||+++++|.+++... +.+++..++.++.||+.||+|||+ . ||+||||||+||+++.++.+||+|||+++...
T Consensus 227 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 300 (446)
T 4ejn_A 227 MEYANGGELFFHLSRE---RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 300 (446)
T ss_dssp ECCCSSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTC
T ss_pred EeeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceecc
Confidence 9999999999998643 458999999999999999999998 8 99999999999999999999999999998655
Q ss_pred CCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCcc
Q 038671 593 PDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHN 672 (707)
Q Consensus 593 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (707)
..........||+.|+|||++.+..++.++||||||+++|||++|+.||..... ......+.......+..
T Consensus 301 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--------~~~~~~i~~~~~~~p~~- 371 (446)
T 4ejn_A 301 KDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--------EKLFELILMEEIRFPRT- 371 (446)
T ss_dssp C-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCCCCTT-
T ss_pred CCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH--------HHHHHHHHhCCCCCCcc-
Confidence 454555667899999999999999999999999999999999999999963221 12222222222222222
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 038671 673 VQDKLISIMEVAISCLDESPESRP-----TIQKVSQ 703 (707)
Q Consensus 673 ~~~~~~~l~~li~~cl~~~P~~Rp-----s~~~l~~ 703 (707)
.+.++.+++.+||+.||.+|| +++|+++
T Consensus 372 ---~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 372 ---LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp ---SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred ---CCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 234588999999999999999 9999886
No 79
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2.4e-41 Score=354.87 Aligned_cols=263 Identities=23% Similarity=0.380 Sum_probs=210.3
Q ss_pred HHHHHHhcCCCCCceeeecCCeeEEEEE------cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcC-CCCceeeee
Q 038671 429 EEIIRVTNDFDDEHCIGKGGQGSVYKAE------LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFY 501 (707)
Q Consensus 429 ~~~~~~~~~~~~~~~lg~G~~g~vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~ 501 (707)
..+....++|++.+.||+|+||.||+|+ ..+++.||||++..... ....+.+.+|++++.++ +||||++++
T Consensus 15 ~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~hpniv~~~ 92 (359)
T 3vhe_A 15 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVNLL 92 (359)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC--HHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred ccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCC--HHHHHHHHHHHHHHHhhcCCcceeeee
Confidence 4445567889999999999999999995 23568999999975432 23456799999999999 799999999
Q ss_pred eeeecCC-ceeEEEeeeccCcHHHHHhcccc-------------------------------------------------
Q 038671 502 GFCSHAR-HSFIVYEYLEMGSLAMILSNDAA------------------------------------------------- 531 (707)
Q Consensus 502 ~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~~------------------------------------------------- 531 (707)
+++.+.+ ..++||||+++|+|.+++.....
T Consensus 93 ~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (359)
T 3vhe_A 93 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKS 172 (359)
T ss_dssp EEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------
T ss_pred eeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccc
Confidence 9987755 48999999999999999975432
Q ss_pred --------------cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCC-
Q 038671 532 --------------AKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSS- 596 (707)
Q Consensus 532 --------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 596 (707)
...+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++........
T Consensus 173 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 249 (359)
T 3vhe_A 173 LSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249 (359)
T ss_dssp -----------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTC
T ss_pred cchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccc
Confidence 11288999999999999999999999 999999999999999999999999999987644332
Q ss_pred -CccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchhhhhhhhhcCCCCCCCCcchH
Q 038671 597 -NWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHNVQ 674 (707)
Q Consensus 597 -~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (707)
......||+.|+|||++.+..++.++||||||+++|||++ |+.||..... ................+.
T Consensus 250 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~------ 319 (359)
T 3vhe_A 250 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI----DEEFCRRLKEGTRMRAPD------ 319 (359)
T ss_dssp EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC----SHHHHHHHHHTCCCCCCT------
T ss_pred hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccch----hHHHHHHHHcCCCCCCCC------
Confidence 2334568899999999999999999999999999999998 9999964321 112222222222222221
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 675 DKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 675 ~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
..+.++.+++.+||+.||.+|||+.|+++.|+
T Consensus 320 ~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 351 (359)
T 3vhe_A 320 YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 351 (359)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 12345889999999999999999999999885
No 80
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=351.90 Aligned_cols=255 Identities=24% Similarity=0.387 Sum_probs=208.6
Q ss_pred hcCCCCCceeeecCCeeEEEEEc--------CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcC-CCCceeeeeeeee
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL--------PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGFCS 505 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~ 505 (707)
.++|++.+.||+|+||.||+|+. ..++.||+|++.... .....+.+.+|+++++++ +||||+++++++.
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 145 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGACT 145 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc--CHHHHHHHHHHHHHHHHhcCCchhhhheeeec
Confidence 46799999999999999999964 234679999987653 233557789999999999 8999999999999
Q ss_pred cCCceeEEEeeeccCcHHHHHhcccc-------------cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCe
Q 038671 506 HARHSFIVYEYLEMGSLAMILSNDAA-------------AKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNV 572 (707)
Q Consensus 506 ~~~~~~lv~e~~~~~~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Ni 572 (707)
.++..++||||+++|+|.+++..... ...+++..++.++.||+.||+|||+. ||+||||||+||
T Consensus 146 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NI 222 (382)
T 3tt0_A 146 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNV 222 (382)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGE
T ss_pred cCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceE
Confidence 99999999999999999999975432 23589999999999999999999999 999999999999
Q ss_pred eecCCCCeEEeccccceecCCCCC--CccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccc
Q 038671 573 LLDLENEAHVSDFGTAKFLKPDSS--NWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISS 649 (707)
Q Consensus 573 l~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~ 649 (707)
+++.++.+||+|||+++....... ......+|+.|+|||++.+..++.++||||||+++|+|++ |+.||.....
T Consensus 223 ll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~--- 299 (382)
T 3tt0_A 223 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV--- 299 (382)
T ss_dssp EECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH---
T ss_pred EEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH---
Confidence 999999999999999987654322 2233467889999999999999999999999999999999 9999863221
Q ss_pred ccchhhhhhhhhcCCC-CCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 650 SSSNLEIALNEMLDPR-LPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 650 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
......+.... ...+. ..+.++.+++.+||+.||++||+++|+++.|+
T Consensus 300 -----~~~~~~~~~~~~~~~~~----~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 348 (382)
T 3tt0_A 300 -----EELFKLLKEGHRMDKPS----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 348 (382)
T ss_dssp -----HHHHHHHHTTCCCCCCS----SCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -----HHHHHHHHcCCCCCCCc----cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11222222221 11121 22345889999999999999999999999875
No 81
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=4.3e-41 Score=352.57 Aligned_cols=256 Identities=24% Similarity=0.372 Sum_probs=205.6
Q ss_pred hcCCCCCceeeecCCeeEEEEEc------CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCC
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL------PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHAR 508 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 508 (707)
.++|++.+.||+|+||.||+|.. .+++.||||++.... .......+.+|+.++++++||||+++++++...+
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~ 147 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC--SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 147 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc--ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence 36789999999999999999973 256789999986532 2334567889999999999999999999999999
Q ss_pred ceeEEEeeeccCcHHHHHhcccc----cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCC---CeE
Q 038671 509 HSFIVYEYLEMGSLAMILSNDAA----AKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLEN---EAH 581 (707)
Q Consensus 509 ~~~lv~e~~~~~~L~~~l~~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~---~~k 581 (707)
..++||||+.+|+|.+++..... ...+++..++.++.||+.||+|||++ ||+||||||+||+++.++ .+|
T Consensus 148 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~k 224 (367)
T 3l9p_A 148 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAK 224 (367)
T ss_dssp SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEE
Confidence 99999999999999999975432 23589999999999999999999999 999999999999999655 599
Q ss_pred EeccccceecCCCC--CCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchhhhhh
Q 038671 582 VSDFGTAKFLKPDS--SNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNLEIAL 658 (707)
Q Consensus 582 l~Dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~ 658 (707)
|+|||+++...... .......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||..... ....
T Consensus 225 L~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~--------~~~~ 296 (367)
T 3l9p_A 225 IGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--------QEVL 296 (367)
T ss_dssp ECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--------HHHH
T ss_pred ECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHH
Confidence 99999997543221 22334567899999999999899999999999999999998 9999864221 1222
Q ss_pred hhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 659 NEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
..+.......... ..+..+.+++.+||+.||++||++.++++.|+
T Consensus 297 ~~i~~~~~~~~~~---~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~ 341 (367)
T 3l9p_A 297 EFVTSGGRMDPPK---NCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 341 (367)
T ss_dssp HHHHTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHcCCCCCCCc---cCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 2222222111111 22345889999999999999999999999875
No 82
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=4.6e-41 Score=346.01 Aligned_cols=254 Identities=25% Similarity=0.359 Sum_probs=202.6
Q ss_pred HhcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeE
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFI 512 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 512 (707)
+.++|++.+.||+|+||.||+|.. .+++.||+|++...... ...+.+.+|+.+++.++||||+++++++.+++..++
T Consensus 5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 82 (323)
T 3tki_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 82 (323)
T ss_dssp TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccccc--chHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 347899999999999999999954 47999999998654322 234568899999999999999999999999999999
Q ss_pred EEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecC
Q 038671 513 VYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLK 592 (707)
Q Consensus 513 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~ 592 (707)
||||+++++|.+++... ..+++..++.++.||+.||+|||+. ||+||||||+||+++.++.+||+|||++....
T Consensus 83 v~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 156 (323)
T 3tki_A 83 FLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFR 156 (323)
T ss_dssp EEECCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred EEEcCCCCcHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceec
Confidence 99999999999988543 3589999999999999999999999 99999999999999999999999999998654
Q ss_pred CCC--CCccccccccCCCCccccccCCC-CccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCC
Q 038671 593 PDS--SNWAELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTP 669 (707)
Q Consensus 593 ~~~--~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (707)
... .......||+.|+|||++.+..+ +.++||||||+++|+|++|+.||+..... ..... ..........
T Consensus 157 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~~----~~~~~~~~~~ 229 (323)
T 3tki_A 157 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS---CQEYS----DWKEKKTYLN 229 (323)
T ss_dssp ETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTT---SHHHH----HHHTTCTTST
T ss_pred cCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchH---HHHHH----HHhcccccCC
Confidence 322 22345689999999999987765 77899999999999999999999743221 01111 1111111110
Q ss_pred CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 670 SHNVQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 670 ~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
.....+.++.+++.+||+.||++|||++|+++.
T Consensus 230 --~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 230 --PWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp --TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred --ccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 112234568899999999999999999999864
No 83
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=2.9e-42 Score=364.07 Aligned_cols=258 Identities=21% Similarity=0.285 Sum_probs=205.8
Q ss_pred HHHhcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCce
Q 038671 432 IRVTNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHS 510 (707)
Q Consensus 432 ~~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 510 (707)
....++|++.+.||+|+||.||+|+. .+++.||+|++...........+.+.+|+.+++.++||||+++++++.+++..
T Consensus 65 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 144 (410)
T 3v8s_A 65 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL 144 (410)
T ss_dssp SCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEE
Confidence 33467899999999999999999965 46899999998542111111223478899999999999999999999999999
Q ss_pred eEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEecccccee
Q 038671 511 FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKF 590 (707)
Q Consensus 511 ~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~ 590 (707)
|+||||++||+|.++++. ..+++..++.++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++.
T Consensus 145 ~lV~E~~~gg~L~~~l~~----~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~~ 217 (410)
T 3v8s_A 145 YMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMK 217 (410)
T ss_dssp EEEECCCTTEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEeCCCCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeEe
Confidence 999999999999999864 2489999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC-CccccccccCCCCccccccCC----CCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCC
Q 038671 591 LKPDSS-NWAELAGTYGYVAPELAYTMK----VTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPR 665 (707)
Q Consensus 591 ~~~~~~-~~~~~~g~~~y~aPE~~~~~~----~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (707)
...... .....+||+.|+|||++.+.. ++.++||||||+++|||++|+.||..... ...............
T Consensus 218 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~----~~~~~~i~~~~~~~~ 293 (410)
T 3v8s_A 218 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL----VGTYSKIMNHKNSLT 293 (410)
T ss_dssp CCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH----HHHHHHHHTHHHHCC
T ss_pred eccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh----hhHHHHHHhcccccc
Confidence 654432 234568999999999988765 78899999999999999999999963221 111122222111122
Q ss_pred CCCCCcchHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHH
Q 038671 666 LPTPSHNVQDKLISIMEVAISCLDESPES--RPTIQKVSQL 704 (707)
Q Consensus 666 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~--Rps~~~l~~~ 704 (707)
.+.... .+.++.+++.+|+..+|++ ||+++|+++.
T Consensus 294 ~p~~~~----~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 294 FPDDND----ISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp CCTTCC----CCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred CCCccc----ccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 332211 2345889999999999998 9999999863
No 84
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=6.2e-41 Score=349.46 Aligned_cols=259 Identities=22% Similarity=0.405 Sum_probs=209.8
Q ss_pred HHHhcCCCCCceeeecCCeeEEEEEcC------CCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeee
Q 038671 432 IRVTNDFDDEHCIGKGGQGSVYKAELP------SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCS 505 (707)
Q Consensus 432 ~~~~~~~~~~~~lg~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~ 505 (707)
....++|++.+.||+|+||.||+|+.. +++.||+|++..... ....+.+.+|++++++++||||+++++++.
T Consensus 43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 120 (343)
T 1luf_A 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS--ADMQADFQREAALMAEFDNPNIVKLLGVCA 120 (343)
T ss_dssp BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccC--HHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 334678999999999999999999653 458899999976432 334577999999999999999999999999
Q ss_pred cCCceeEEEeeeccCcHHHHHhcccc---------------------cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEe
Q 038671 506 HARHSFIVYEYLEMGSLAMILSNDAA---------------------AKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVH 564 (707)
Q Consensus 506 ~~~~~~lv~e~~~~~~L~~~l~~~~~---------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH 564 (707)
+.+..++||||+++++|.+++..... ...+++..++.++.||++||+|||++ ||+|
T Consensus 121 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH 197 (343)
T 1luf_A 121 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVH 197 (343)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCC
T ss_pred cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---Ceec
Confidence 99999999999999999999975321 14689999999999999999999999 9999
Q ss_pred cCCCCCCeeecCCCCeEEeccccceecCCCC--CCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCC
Q 038671 565 RDISSKNVLLDLENEAHVSDFGTAKFLKPDS--SNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPR 641 (707)
Q Consensus 565 ~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~ 641 (707)
|||||+||+++.++.+||+|||++....... .......+++.|+|||.+.+..++.++||||||+++|+|++ |+.||
T Consensus 198 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 277 (343)
T 1luf_A 198 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY 277 (343)
T ss_dssp SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred CCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcC
Confidence 9999999999999999999999997654322 12234567889999999998889999999999999999999 99998
Q ss_pred CcccccccccchhhhhhhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 642 DFISSISSSSSNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
..... ......+.....+.... ..+.++.+++.+||+.||++||++.++++.|+
T Consensus 278 ~~~~~--------~~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~ 331 (343)
T 1luf_A 278 YGMAH--------EEVIYYVRDGNILACPE---NCPLELYNLMRLCWSKLPADRPSFCSIHRILQ 331 (343)
T ss_dssp TTSCH--------HHHHHHHHTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCh--------HHHHHHHhCCCcCCCCC---CCCHHHHHHHHHHcccCcccCCCHHHHHHHHH
Confidence 63221 12222222222222111 23346899999999999999999999999875
No 85
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=8.4e-41 Score=338.59 Aligned_cols=254 Identities=20% Similarity=0.316 Sum_probs=206.9
Q ss_pred HhcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeE
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFI 512 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 512 (707)
+.++|++.+.||+|+||.||+|. ..+|+.||+|++...... ....+.+.+|++++++++||||+++++++..++..++
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 82 (284)
T 3kk8_A 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 82 (284)
T ss_dssp TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCC-HHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEE
Confidence 45789999999999999999995 456899999998654322 2345678899999999999999999999999999999
Q ss_pred EEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCC---eEEeccccce
Q 038671 513 VYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENE---AHVSDFGTAK 589 (707)
Q Consensus 513 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~---~kl~Dfg~~~ 589 (707)
||||+.+++|.+.+... ..+++..++.++.|++.||+|||+. |++||||||+||+++.++. +||+|||.+.
T Consensus 83 v~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~ 156 (284)
T 3kk8_A 83 VFDLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156 (284)
T ss_dssp EECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeE
Confidence 99999999999888643 4589999999999999999999999 9999999999999987665 9999999998
Q ss_pred ecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCC
Q 038671 590 FLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTP 669 (707)
Q Consensus 590 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (707)
..... .......|++.|+|||.+.+..++.++||||+|+++|+|++|+.||..... ..............+
T Consensus 157 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~--------~~~~~~~~~~~~~~~ 227 (284)
T 3kk8_A 157 EVNDS-EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--------HRLYAQIKAGAYDYP 227 (284)
T ss_dssp ECCSS-CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTCCCCC
T ss_pred EcccC-ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch--------hHHHHHHHhccccCC
Confidence 76543 233456799999999999999999999999999999999999999863221 111111111222111
Q ss_pred CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 670 SHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 670 ~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
.......+.++.+++.+||+.||++|||++|+++
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 228 SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred chhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 1122233456899999999999999999999986
No 86
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=6.3e-41 Score=345.49 Aligned_cols=256 Identities=21% Similarity=0.279 Sum_probs=209.1
Q ss_pred HhcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCch---hhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCc
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSE---MASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARH 509 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 509 (707)
+.++|++.+.||+|+||.||+|+. .+|+.||+|++....... ....+++.+|+.++++++||||+++++++.+.+.
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 89 (321)
T 2a2a_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD 89 (321)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence 346799999999999999999964 578999999986543221 1135678999999999999999999999999999
Q ss_pred eeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCC----CeEEecc
Q 038671 510 SFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLEN----EAHVSDF 585 (707)
Q Consensus 510 ~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~----~~kl~Df 585 (707)
.++||||+++++|.+++... ..+++..++.++.|++.||+|||+. ||+||||||+||+++.++ .+||+||
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Df 163 (321)
T 2a2a_A 90 VVLILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (321)
T ss_dssp EEEEECCCCSCBHHHHHHTC---SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccC
Confidence 99999999999999999653 4589999999999999999999999 999999999999999888 7999999
Q ss_pred ccceecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCC
Q 038671 586 GTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPR 665 (707)
Q Consensus 586 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (707)
|++....... ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||.... .......+....
T Consensus 164 g~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~~~~~~~i~~~~ 234 (321)
T 2a2a_A 164 GLAHEIEDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT--------KQETLANITSVS 234 (321)
T ss_dssp TTCEECCTTC-CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS--------HHHHHHHHHTTC
T ss_pred ccceecCccc-cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHhcc
Confidence 9998765432 2345679999999999998899999999999999999999999996322 112222222222
Q ss_pred CCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 666 LPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 666 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
...+.......+..+.+++.+||+.||++|||++|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 235 YDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp CCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred cccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 222211112234568999999999999999999999863
No 87
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=6.6e-41 Score=338.30 Aligned_cols=250 Identities=26% Similarity=0.450 Sum_probs=202.3
Q ss_pred hcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIV 513 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 513 (707)
.++|++.+.||+|+||.||+|. ..+++.||+|++.............+.+|+.++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 4679999999999999999995 556789999998643222223356788999999999999999999999999999999
Q ss_pred EeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCC
Q 038671 514 YEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKP 593 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~ 593 (707)
|||+++++|.+++... ..+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++.....
T Consensus 88 ~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~ 161 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 161 (279)
T ss_dssp ECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC--
T ss_pred EecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCc
Confidence 9999999999998643 4589999999999999999999999 999999999999999999999999999865432
Q ss_pred CCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCcch
Q 038671 594 DSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHNV 673 (707)
Q Consensus 594 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (707)
. ......|++.|+|||.+.+..++.++||||||+++|+|++|+.||.... .......+.......+..
T Consensus 162 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~~~~~~~~~-- 229 (279)
T 3fdn_A 162 S--RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------YQETYKRISRVEFTFPDF-- 229 (279)
T ss_dssp --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHHTCCCCCTT--
T ss_pred c--cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCc--------HHHHHHHHHhCCCCCCCc--
Confidence 2 2344578999999999999889999999999999999999999996322 111222222222222221
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 674 QDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 674 ~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
.+..+.+++.+||+.||++||+++|+++.
T Consensus 230 --~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 230 --VTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp --SCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred --CCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 23458899999999999999999999864
No 88
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.2e-41 Score=344.67 Aligned_cols=259 Identities=22% Similarity=0.328 Sum_probs=199.9
Q ss_pred HHhcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCcee
Q 038671 433 RVTNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSF 511 (707)
Q Consensus 433 ~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 511 (707)
...++|++.+.||+|+||.||+|.. .+++.||+|++...........+.+.+|+..+++++||||+++++++..++..+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~ 110 (309)
T 2h34_A 31 TQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLY 110 (309)
T ss_dssp ---CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred cEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEE
Confidence 3458899999999999999999965 478999999987654444445578999999999999999999999999999999
Q ss_pred EEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceec
Q 038671 512 IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFL 591 (707)
Q Consensus 512 lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~ 591 (707)
+||||+++++|.+++... ..+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++...
T Consensus 111 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 184 (309)
T 2h34_A 111 VDMRLINGVDLAAMLRRQ---GPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASAT 184 (309)
T ss_dssp EEEECCCCEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC----
T ss_pred EEEEecCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCccc
Confidence 999999999999999643 4589999999999999999999999 9999999999999999999999999999765
Q ss_pred CCCC-CCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCC
Q 038671 592 KPDS-SNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPS 670 (707)
Q Consensus 592 ~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (707)
.... .......|++.|+|||.+.+..++.++||||||+++|+|++|+.||..... . ..........+.+.
T Consensus 185 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~-~~~~~~~~~~~~~~ 255 (309)
T 2h34_A 185 TDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL--------S-VMGAHINQAIPRPS 255 (309)
T ss_dssp ------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH--------H-HHHHHHHSCCCCGG
T ss_pred cccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH--------H-HHHHHhccCCCCcc
Confidence 5432 223345789999999999998899999999999999999999999964221 1 11111111111111
Q ss_pred cchHHHHHHHHHHHHhccCCCCCCCC-CHHHHHHHhc
Q 038671 671 HNVQDKLISIMEVAISCLDESPESRP-TIQKVSQLLK 706 (707)
Q Consensus 671 ~~~~~~~~~l~~li~~cl~~~P~~Rp-s~~~l~~~L~ 706 (707)
......+.++.+++.+||+.||++|| +++++++.|+
T Consensus 256 ~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~ 292 (309)
T 2h34_A 256 TVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAH 292 (309)
T ss_dssp GTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHH
Confidence 11223345688999999999999999 9999998874
No 89
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.2e-40 Score=342.62 Aligned_cols=256 Identities=24% Similarity=0.395 Sum_probs=208.4
Q ss_pred hcCCCCCceeeecCCeeEEEEEc------CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCC
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL------PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHAR 508 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 508 (707)
.++|++.+.||+|+||.||+|.. .+++.||+|++.... .....+.+.+|++++++++||||+++++++.+.+
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 99 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA--SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG 99 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC
Confidence 46789999999999999999964 345889999987543 2345577899999999999999999999999999
Q ss_pred ceeEEEeeeccCcHHHHHhcccc---------------------cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCC
Q 038671 509 HSFIVYEYLEMGSLAMILSNDAA---------------------AKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDI 567 (707)
Q Consensus 509 ~~~lv~e~~~~~~L~~~l~~~~~---------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl 567 (707)
..++||||+++++|.+++..... ...+++..++.++.||++||+|||++ ||+||||
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~di 176 (314)
T 2ivs_A 100 PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDL 176 (314)
T ss_dssp SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCccccc
Confidence 99999999999999999975432 23488999999999999999999999 9999999
Q ss_pred CCCCeeecCCCCeEEeccccceecCCCCCC--ccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcc
Q 038671 568 SSKNVLLDLENEAHVSDFGTAKFLKPDSSN--WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFI 644 (707)
Q Consensus 568 k~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~ 644 (707)
||+||+++.++.+||+|||++......... .....+++.|+|||.+.+..++.++||||||+++|+|++ |+.||...
T Consensus 177 kp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 256 (314)
T 2ivs_A 177 AARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256 (314)
T ss_dssp SGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred chheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999999876544322 233456788999999998889999999999999999999 99998643
Q ss_pred cccccccchhhhhhhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 645 SSISSSSSNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
.. ...............+ . ..+.++.+++.+||+.||++||++.++++.|+
T Consensus 257 ~~-----~~~~~~~~~~~~~~~~--~----~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~ 307 (314)
T 2ivs_A 257 PP-----ERLFNLLKTGHRMERP--D----NCSEEMYRLMLQCWKQEPDKRPVFADISKDLE 307 (314)
T ss_dssp CG-----GGHHHHHHTTCCCCCC--T----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CH-----HHHHHHhhcCCcCCCC--c----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 22 1111122211111111 1 23356899999999999999999999999875
No 90
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=6.7e-41 Score=341.18 Aligned_cols=260 Identities=25% Similarity=0.409 Sum_probs=202.0
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-----CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecC--
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-----PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHA-- 507 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-- 507 (707)
.++|++.+.||+|+||.||+|+. .+++.||||++... .....+.+.+|++++++++||||+++++++...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 85 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 85 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHH
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 46799999999999999999973 46899999998753 233456789999999999999999999998553
Q ss_pred CceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEecccc
Q 038671 508 RHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGT 587 (707)
Q Consensus 508 ~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~ 587 (707)
...++||||+++++|.+++.... ..+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 160 (295)
T 3ugc_A 86 RNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL 160 (295)
T ss_dssp TSCEEEEECCTTCBHHHHHHHCG--GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCS
T ss_pred CceEEEEEeCCCCCHHHHHHhcc--cccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcc
Confidence 46899999999999999996542 3589999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCC---CccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccc--------ccccchhhh
Q 038671 588 AKFLKPDSS---NWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSI--------SSSSSNLEI 656 (707)
Q Consensus 588 ~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~--------~~~~~~~~~ 656 (707)
+........ ......++..|+|||.+.+..++.++||||||+++|+|++|..||...... .........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (295)
T 3ugc_A 161 TKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 240 (295)
T ss_dssp CC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHH
T ss_pred cccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHH
Confidence 987654322 122345677899999999999999999999999999999999998632110 000000111
Q ss_pred hhhhhc-CCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 657 ALNEML-DPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 657 ~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
...... ..+.+.+. ..+.++.+++.+||+.||++|||+.|+++.|+
T Consensus 241 ~~~~~~~~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~ 287 (295)
T 3ugc_A 241 LIELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 287 (295)
T ss_dssp HHHHHHTTCCCCCCT----TCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHhccCcCCCCc----CcCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 111111 12222222 23456899999999999999999999999875
No 91
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.1e-40 Score=345.67 Aligned_cols=251 Identities=23% Similarity=0.351 Sum_probs=209.6
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIV 513 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 513 (707)
.++|.+.+.||+|+||.||++.. .+++.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 46799999999999999999954 56889999998754433445567889999999999999999999999999999999
Q ss_pred EeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCC
Q 038671 514 YEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKP 593 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~ 593 (707)
|||+.+++|.+++... ..+++..++.++.||+.||+|||++ ||+||||||+||+++.++.+||+|||++.....
T Consensus 120 ~e~~~~~~L~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 193 (335)
T 2owb_A 120 LELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 193 (335)
T ss_dssp ECCCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EecCCCCCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceeccc
Confidence 9999999999988643 4589999999999999999999999 999999999999999999999999999988765
Q ss_pred CCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCcch
Q 038671 594 DSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHNV 673 (707)
Q Consensus 594 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (707)
.........|++.|+|||.+.+..++.++||||||+++|+|++|+.||..... ..............+..
T Consensus 194 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~~~~~~~~~~~~~~~~~-- 263 (335)
T 2owb_A 194 DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL--------KETYLRIKKNEYSIPKH-- 263 (335)
T ss_dssp TTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHHHTCCCCCTT--
T ss_pred CcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCH--------HHHHHHHhcCCCCCCcc--
Confidence 55555567899999999999998899999999999999999999999963221 11111111112222211
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 674 QDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 674 ~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
.+..+.+++.+||+.||++||+++|+++
T Consensus 264 --~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 264 --INPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp --SCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred --CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 2345889999999999999999999886
No 92
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=8.7e-41 Score=343.53 Aligned_cols=259 Identities=20% Similarity=0.367 Sum_probs=190.1
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIV 513 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 513 (707)
.++|++.+.||+|+||.||+|.. .+|+.||+|++..... ....+.+.+|++++++++||||+++++++..++..++|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 81 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE--EGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLV 81 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCST--TCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccc--cccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEE
Confidence 36799999999999999999965 4689999999865432 22335678999999999999999999999999999999
Q ss_pred EeeeccCcHHHHHhccc---ccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEecccccee
Q 038671 514 YEYLEMGSLAMILSNDA---AAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKF 590 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~ 590 (707)
|||++ ++|.+++.... ....+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||++..
T Consensus 82 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 157 (317)
T 2pmi_A 82 FEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARA 157 (317)
T ss_dssp EECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEE
T ss_pred EEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCcccee
Confidence 99998 58988885432 123589999999999999999999999 999999999999999999999999999988
Q ss_pred cCCCCCCccccccccCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhh--------
Q 038671 591 LKPDSSNWAELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEM-------- 661 (707)
Q Consensus 591 ~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-------- 661 (707)
............||+.|+|||++.+. .++.++||||||+++|+|++|+.||....... .........
T Consensus 158 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~----~~~~i~~~~~~~~~~~~ 233 (317)
T 2pmi_A 158 FGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE----QLKLIFDIMGTPNESLW 233 (317)
T ss_dssp TTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHHHHCSCCTTTC
T ss_pred cCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH----HHHHHHHHhCCCChhHh
Confidence 76554445556889999999998764 58999999999999999999999996432210 000000000
Q ss_pred --------cCCCCCC-CCcch---------HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 662 --------LDPRLPT-PSHNV---------QDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 662 --------~~~~~~~-~~~~~---------~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
..+.... +.... ...+.++.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 234 PSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 0000000 00000 012346899999999999999999999976
No 93
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.7e-41 Score=351.27 Aligned_cols=255 Identities=17% Similarity=0.233 Sum_probs=205.1
Q ss_pred hcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcC-CCCceeeeeeeeecCCceeE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGFCSHARHSFI 512 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 512 (707)
.++|++.+.||+|+||.||+|. ..+|+.||||++..... .+.+.+|+++++.+ +||||+++++++..++..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l 82 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR-----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAM 82 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS-----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc-----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEE
Confidence 4679999999999999999996 46799999999865422 23578899999999 89999999999999999999
Q ss_pred EEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCC-----eEEecccc
Q 038671 513 VYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENE-----AHVSDFGT 587 (707)
Q Consensus 513 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~-----~kl~Dfg~ 587 (707)
||||+ +++|.+++... .+.+++..++.++.|++.||+|||+. ||+||||||+||+++.++. +||+|||+
T Consensus 83 v~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~ 156 (330)
T 2izr_A 83 VLELL-GPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFAL 156 (330)
T ss_dssp EEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTT
T ss_pred EEEeC-CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEccc
Confidence 99999 99999999643 34699999999999999999999999 9999999999999998887 99999999
Q ss_pred ceecCCCCCC-------ccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhh
Q 038671 588 AKFLKPDSSN-------WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNE 660 (707)
Q Consensus 588 ~~~~~~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 660 (707)
+......... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||..... .........
T Consensus 157 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~-----~~~~~~~~~ 231 (330)
T 2izr_A 157 AKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKA-----DTLKERYQK 231 (330)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC-----SSHHHHHHH
T ss_pred ceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccc-----ccHHHHHHH
Confidence 9876543321 2456799999999999999999999999999999999999999975322 111111111
Q ss_pred hcCCCCCCCCcc-hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 661 MLDPRLPTPSHN-VQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 661 ~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
+.....+.+... ....+ ++.+++..||+.||.+||+++++.+.|+
T Consensus 232 i~~~~~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~ 277 (330)
T 2izr_A 232 IGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFT 277 (330)
T ss_dssp HHHHHHHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred HHhhhccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHH
Confidence 111111111000 01122 6999999999999999999999998774
No 94
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=9.3e-41 Score=362.64 Aligned_cols=258 Identities=22% Similarity=0.306 Sum_probs=210.0
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIV 513 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 513 (707)
.++|++.+.||+|+||.||+|+. .+|+.||+|++...........+.+.+|++++++++||||+++++++...+..|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 36788999999999999999965 57999999998643222223456788999999999999999999999999999999
Q ss_pred EeeeccCcHHHHHhcccc-cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecC
Q 038671 514 YEYLEMGSLAMILSNDAA-AKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLK 592 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~ 592 (707)
|||++||+|.+++..... ...+++..++.++.||+.||+|||++ ||+||||||+||+++.+|.+||+|||+++...
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 999999999999875432 34689999999999999999999999 99999999999999999999999999999876
Q ss_pred CCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCcc
Q 038671 593 PDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHN 672 (707)
Q Consensus 593 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (707)
.........+||+.|+|||++.+..++.++|||||||++|||++|+.||...... .........+.......+.
T Consensus 341 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~----~~~~~~~~~i~~~~~~~p~-- 414 (543)
T 3c4z_A 341 AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK----VENKELKQRVLEQAVTYPD-- 414 (543)
T ss_dssp TTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCC----CCHHHHHHHHHHCCCCCCT--
T ss_pred CCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccc----hhHHHHHHHHhhcccCCCc--
Confidence 5554455568999999999999999999999999999999999999999743211 1112222222222222222
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCH-----HHHHH
Q 038671 673 VQDKLISIMEVAISCLDESPESRPTI-----QKVSQ 703 (707)
Q Consensus 673 ~~~~~~~l~~li~~cl~~~P~~Rps~-----~~l~~ 703 (707)
..+..+.+++.+||+.||++||++ +++++
T Consensus 415 --~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 415 --KFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp --TSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred --ccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 223458899999999999999975 55553
No 95
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=6.9e-41 Score=351.14 Aligned_cols=246 Identities=24% Similarity=0.310 Sum_probs=198.2
Q ss_pred CceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEEEeeecc
Q 038671 441 EHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEM 519 (707)
Q Consensus 441 ~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 519 (707)
.+.||+|+||.||+|. ..+|+.||+|++.... ....+.+.+|++++++++||||+++++++...+..++||||+++
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~ 170 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRG---MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDG 170 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc---cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence 5679999999999995 4679999999987542 23456789999999999999999999999999999999999999
Q ss_pred CcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeee--cCCCCeEEeccccceecCCCCCC
Q 038671 520 GSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLL--DLENEAHVSDFGTAKFLKPDSSN 597 (707)
Q Consensus 520 ~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~--~~~~~~kl~Dfg~~~~~~~~~~~ 597 (707)
++|.+++... ...+++..++.++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||++....... .
T Consensus 171 ~~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~-~ 244 (373)
T 2x4f_A 171 GELFDRIIDE--SYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE-K 244 (373)
T ss_dssp CEEHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC-B
T ss_pred CcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc-c
Confidence 9999988543 23589999999999999999999999 99999999999999 567899999999998765433 2
Q ss_pred ccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCcchHHHH
Q 038671 598 WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHNVQDKL 677 (707)
Q Consensus 598 ~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (707)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||..... ......+.......+.......+
T Consensus 245 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~--------~~~~~~i~~~~~~~~~~~~~~~~ 316 (373)
T 2x4f_A 245 LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND--------AETLNNILACRWDLEDEEFQDIS 316 (373)
T ss_dssp CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHHHTCCCSCSGGGTTSC
T ss_pred cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhccCCCChhhhccCC
Confidence 3445799999999999988899999999999999999999999964221 12222222222222222233445
Q ss_pred HHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 678 ISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 678 ~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
.++.+++.+||+.||.+||++.|+++
T Consensus 317 ~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 317 EEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 67899999999999999999999986
No 96
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.4e-40 Score=343.58 Aligned_cols=257 Identities=22% Similarity=0.375 Sum_probs=191.2
Q ss_pred HhcCCCCCceeeecCCeeEEEEEcCCC----cEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCc
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAELPSG----EIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARH 509 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 509 (707)
..++|++.+.||+|+||.||+|..... ..||+|++...... ....+.+.+|++++++++||||+++++++.....
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIA-SSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC-------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccC-HHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 356799999999999999999976543 27999998764322 2346779999999999999999999999987665
Q ss_pred e------eEEEeeeccCcHHHHHhccccc---CCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCe
Q 038671 510 S------FIVYEYLEMGSLAMILSNDAAA---KDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEA 580 (707)
Q Consensus 510 ~------~lv~e~~~~~~L~~~l~~~~~~---~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~ 580 (707)
. ++||||+.+++|.+++...... ..+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCE
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCE
Confidence 5 9999999999999998644322 2589999999999999999999999 99999999999999999999
Q ss_pred EEeccccceecCCCCC--CccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchhhhh
Q 038671 581 HVSDFGTAKFLKPDSS--NWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNLEIA 657 (707)
Q Consensus 581 kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~ 657 (707)
||+|||++........ ......+++.|+|||.+.+..++.++||||||+++|+|++ |+.||..... ...
T Consensus 177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--------~~~ 248 (323)
T 3qup_A 177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN--------AEI 248 (323)
T ss_dssp EECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--------GGH
T ss_pred EEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccCh--------HHH
Confidence 9999999987644322 1223456788999999999999999999999999999999 9999874322 111
Q ss_pred hhhhcC-CCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 658 LNEMLD-PRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 658 ~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
...... .....+. ..+.++.+++.+||+.||++|||+.++++.|+
T Consensus 249 ~~~~~~~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 294 (323)
T 3qup_A 249 YNYLIGGNRLKQPP----ECMEEVYDLMYQCWSADPKQRPSFTCLRMELE 294 (323)
T ss_dssp HHHHHTTCCCCCCT----TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHhcCCCCCCCC----ccCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 111111 1122222 23345899999999999999999999998875
No 97
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1e-40 Score=342.38 Aligned_cols=261 Identities=23% Similarity=0.335 Sum_probs=199.4
Q ss_pred hcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIV 513 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 513 (707)
.++|++.+.||+|+||.||+|. ..+|+.||+|++...........+.+.+|+.++++++||||+++++++...+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 4579999999999999999995 467999999998764444445667899999999999999999999999999999999
Q ss_pred EeeeccCcHHHHHhccc-ccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecC
Q 038671 514 YEYLEMGSLAMILSNDA-AAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLK 592 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~ 592 (707)
|||+++++|.+++.... ....+++..++.++.|++.||+|||+. |++||||||+||+++.++.+||+|||++....
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 99999999999986432 234589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCcc
Q 038671 593 PDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHN 672 (707)
Q Consensus 593 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (707)
..........|++.|+|||.+.+..++.++||||||+++|+|++|+.||..... ..............+...
T Consensus 188 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~~~~~-- 259 (310)
T 2wqm_A 188 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM------NLYSLCKKIEQCDYPPLP-- 259 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C------CHHHHHHHHHTTCSCCCC--
T ss_pred CCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch------hHHHHHHHhhcccCCCCc--
Confidence 544444456789999999999988899999999999999999999999863211 111111222222222111
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 673 VQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 673 ~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
....+.++.+++.+||+.||.+||+++++++.|+
T Consensus 260 ~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~ 293 (310)
T 2wqm_A 260 SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAK 293 (310)
T ss_dssp TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 1123456899999999999999999999999875
No 98
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.9e-41 Score=354.20 Aligned_cols=266 Identities=20% Similarity=0.324 Sum_probs=211.4
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCC--cee
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHAR--HSF 511 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~ 511 (707)
.++|++.+.||+|+||.||+|+. .+|+.||+|++.... .....+.+.+|++++++++||||+++++++...+ ..+
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 85 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNIS--FLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGG--GGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccc--ccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeE
Confidence 35799999999999999999965 469999999986432 1223567789999999999999999999997655 679
Q ss_pred EEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeee----cCCCCeEEecccc
Q 038671 512 IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLL----DLENEAHVSDFGT 587 (707)
Q Consensus 512 lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~----~~~~~~kl~Dfg~ 587 (707)
+||||+++++|.+++........+++..++.++.||+.||+|||+. ||+||||||+||++ +.++.+||+|||+
T Consensus 86 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~ 162 (396)
T 4eut_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (396)
T ss_dssp EEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGG
T ss_pred EEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCC
Confidence 9999999999999997665555599999999999999999999999 99999999999999 7777899999999
Q ss_pred ceecCCCCCCccccccccCCCCcccccc--------CCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhh
Q 038671 588 AKFLKPDSSNWAELAGTYGYVAPELAYT--------MKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALN 659 (707)
Q Consensus 588 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~--------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 659 (707)
++...... ......||+.|+|||.+.+ ..++.++||||||+++|||++|+.||..................
T Consensus 163 a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~ 241 (396)
T 4eut_A 163 ARELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (396)
T ss_dssp CEECCCGG-GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHH
T ss_pred ceEccCCC-ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhc
Confidence 98765432 2344679999999998865 45788999999999999999999999643322111111111111
Q ss_pred hhc-----------------CCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 660 EML-----------------DPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 660 ~~~-----------------~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
... ....+.........+..+.+++.+||+.||++||+++++++.++
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~ 305 (396)
T 4eut_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS 305 (396)
T ss_dssp SCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred CCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHH
Confidence 100 01222233344677888999999999999999999999988763
No 99
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=4.8e-40 Score=333.52 Aligned_cols=254 Identities=30% Similarity=0.477 Sum_probs=201.7
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhh----HHHHHHHHHHHhcCCCCceeeeeeeeecCCc
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMAS----QQEFLNEVKTLTGIRHRNIVKFYGFCSHARH 509 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~----~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 509 (707)
.++|++.+.||+|+||.||+|+. .+++.||+|++.......... .+.+.+|++++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 36799999999999999999954 679999999987543332211 167899999999999999999999986654
Q ss_pred eeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCC--eEecCCCCCCeeecCCCC-----eEE
Q 038671 510 SFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPP--IVHRDISSKNVLLDLENE-----AHV 582 (707)
Q Consensus 510 ~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~Nil~~~~~~-----~kl 582 (707)
++||||+++++|.+++... ...+++..++.++.|++.||+|||++ + |+||||||+||+++.++. +||
T Consensus 97 -~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl 170 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDK--AHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKV 170 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEE
T ss_pred -eEEEEecCCCCHHHHHhcc--cCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEe
Confidence 6999999999999888643 34689999999999999999999999 8 999999999999988776 999
Q ss_pred eccccceecCCCCCCccccccccCCCCccccc--cCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhh
Q 038671 583 SDFGTAKFLKPDSSNWAELAGTYGYVAPELAY--TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNE 660 (707)
Q Consensus 583 ~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~--~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 660 (707)
+|||++..... ......|++.|+|||.+. ...++.++||||||+++|+|++|+.||....... ..........
T Consensus 171 ~Dfg~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--~~~~~~~~~~ 245 (287)
T 4f0f_A 171 ADFGLSQQSVH---SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK--IKFINMIREE 245 (287)
T ss_dssp CCCTTCBCCSS---CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH--HHHHHHHHHS
T ss_pred CCCCccccccc---cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH--HHHHHHHhcc
Confidence 99999975432 334567999999999984 4557889999999999999999999996432210 0001111111
Q ss_pred hcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 661 MLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
...+..+. ..+.++.+++.+||+.||++|||++++++.|+
T Consensus 246 ~~~~~~~~------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 285 (287)
T 4f0f_A 246 GLRPTIPE------DCPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285 (287)
T ss_dssp CCCCCCCT------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCCCc------ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 11222221 23456899999999999999999999999885
No 100
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.2e-40 Score=336.11 Aligned_cols=251 Identities=22% Similarity=0.322 Sum_probs=205.9
Q ss_pred HhcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeE
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFI 512 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 512 (707)
+.++|++.+.||+|+||.||+|.. .+++.+|+|++..... ...+.+.+|++++++++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYL 83 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC---SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc---chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEE
Confidence 456799999999999999999954 5678999999865322 235678999999999999999999999999999999
Q ss_pred EEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeee---cCCCCeEEeccccce
Q 038671 513 VYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLL---DLENEAHVSDFGTAK 589 (707)
Q Consensus 513 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~---~~~~~~kl~Dfg~~~ 589 (707)
||||+++++|.+++... ..+++..++.++.|++.||+|||++ |++||||||+||++ +.++.+||+|||++.
T Consensus 84 v~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~ 157 (277)
T 3f3z_A 84 VMELCTGGELFERVVHK---RVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA 157 (277)
T ss_dssp EEECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEeccCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccce
Confidence 99999999999988643 4589999999999999999999999 99999999999999 788899999999998
Q ss_pred ecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCC
Q 038671 590 FLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTP 669 (707)
Q Consensus 590 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (707)
...... ......||+.|+|||.+.+. ++.++||||||+++|+|++|+.||..... ......+.......+
T Consensus 158 ~~~~~~-~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~--------~~~~~~~~~~~~~~~ 227 (277)
T 3f3z_A 158 RFKPGK-MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTD--------SEVMLKIREGTFTFP 227 (277)
T ss_dssp ECCTTS-CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCCCC
T ss_pred eccCcc-chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHhCCCCCC
Confidence 765433 33456799999999988765 89999999999999999999999963221 122222222222222
Q ss_pred CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 670 SHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 670 ~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
.......+.++.+++.+||+.||++||++.++++
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 228 EKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred chhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 2222234567899999999999999999999875
No 101
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.6e-41 Score=351.44 Aligned_cols=262 Identities=23% Similarity=0.289 Sum_probs=204.7
Q ss_pred HHHHhcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCC--chhhhHHHHHHHHHHHhcCCCCceeeeeeeeecC
Q 038671 431 IIRVTNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLP--SEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHA 507 (707)
Q Consensus 431 ~~~~~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 507 (707)
+..+.++|++.+.||+|+||.||+|. ..+++.||+|++..... ......+.+.+|++++++++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 35667889999999999999999995 46788999999853211 1123456799999999999999999999999999
Q ss_pred CceeEEEeeeccCcHHHHHhcccc-------------------------------------cCCCChHHHHHHHHHHHHH
Q 038671 508 RHSFIVYEYLEMGSLAMILSNDAA-------------------------------------AKDLGWTKRMNVIKGVVDA 550 (707)
Q Consensus 508 ~~~~lv~e~~~~~~L~~~l~~~~~-------------------------------------~~~l~~~~~~~i~~~i~~~ 550 (707)
+..++||||+++|+|.+++..... ...+++..++.++.||+.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 999999999999999999852110 1123577788999999999
Q ss_pred HHHHHhCCCCCeEecCCCCCCeeecCCC--CeEEeccccceecCCCCC----CccccccccCCCCcccccc--CCCCccc
Q 038671 551 LSYMHNDCFPPIVHRDISSKNVLLDLEN--EAHVSDFGTAKFLKPDSS----NWAELAGTYGYVAPELAYT--MKVTEKC 622 (707)
Q Consensus 551 l~~LH~~~~~~ivH~dlk~~Nil~~~~~--~~kl~Dfg~~~~~~~~~~----~~~~~~g~~~y~aPE~~~~--~~~~~~~ 622 (707)
|+|||+. +|+||||||+||+++.++ .+||+|||++........ ......||+.|+|||.+.+ ..++.++
T Consensus 181 l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 9999999 999999999999998776 899999999987643221 2345679999999999875 6788999
Q ss_pred hhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 038671 623 DVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVS 702 (707)
Q Consensus 623 Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~ 702 (707)
||||||+++|+|++|+.||..... ..............+.......+.++.+++.+||+.||.+||++.+++
T Consensus 258 DiwslG~il~el~~g~~pf~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l 329 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVND--------ADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRAL 329 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCh--------HHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHh
Confidence 999999999999999999964322 122222222233222223333456789999999999999999999998
Q ss_pred H
Q 038671 703 Q 703 (707)
Q Consensus 703 ~ 703 (707)
+
T Consensus 330 ~ 330 (345)
T 3hko_A 330 Q 330 (345)
T ss_dssp H
T ss_pred c
Confidence 6
No 102
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-41 Score=352.30 Aligned_cols=258 Identities=23% Similarity=0.382 Sum_probs=206.7
Q ss_pred HhcCCCCCceeeecCCeeEEEEEc------CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcC-CCCceeeeeeeeec
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAEL------PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGFCSH 506 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 506 (707)
..++|++.+.||+|+||.||+|.. .+++.||+|++.... .....+.+.+|+.+++++ +||||+++++++..
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 120 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA--DSSEREALMSELKMMTQLGSHENIVNLLGACTL 120 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee
Confidence 457899999999999999999964 346789999987542 222446789999999999 89999999999999
Q ss_pred CCceeEEEeeeccCcHHHHHhccccc--------------------CCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecC
Q 038671 507 ARHSFIVYEYLEMGSLAMILSNDAAA--------------------KDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRD 566 (707)
Q Consensus 507 ~~~~~lv~e~~~~~~L~~~l~~~~~~--------------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~d 566 (707)
.+..++||||+++|+|.+++...... ..+++..++.++.||+.||+|||+. ||+|||
T Consensus 121 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~D 197 (344)
T 1rjb_A 121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRD 197 (344)
T ss_dssp SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETT
T ss_pred CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCC
Confidence 99999999999999999999754321 3479999999999999999999999 999999
Q ss_pred CCCCCeeecCCCCeEEeccccceecCCCCCC--ccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCc
Q 038671 567 ISSKNVLLDLENEAHVSDFGTAKFLKPDSSN--WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDF 643 (707)
Q Consensus 567 lk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~ 643 (707)
|||+||+++.++.+||+|||++......... .....+|+.|+|||.+.+..++.++||||||+++|+|+| |+.||..
T Consensus 198 ikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 277 (344)
T 1rjb_A 198 LAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG 277 (344)
T ss_dssp CSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred CChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCccc
Confidence 9999999999999999999999876544322 233467889999999998899999999999999999998 9999964
Q ss_pred ccccccccchhhhhhhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 644 ISSISSSSSNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
... ................+ . ..+.++.+++.+||+.||.+||++.++++.|+
T Consensus 278 ~~~----~~~~~~~~~~~~~~~~~--~----~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 330 (344)
T 1rjb_A 278 IPV----DANFYKLIQNGFKMDQP--F----YATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 330 (344)
T ss_dssp CCC----SHHHHHHHHTTCCCCCC--T----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCc----HHHHHHHHhcCCCCCCC--C----CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 321 11122222222222111 1 12355899999999999999999999999875
No 103
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.8e-40 Score=336.68 Aligned_cols=257 Identities=27% Similarity=0.439 Sum_probs=194.8
Q ss_pred hcCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVY 514 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 514 (707)
.++|++.+.||+|+||.||+|+... .+|+|++..... .....+.+.+|++++++++||||+++++++ .....++||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~ 98 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAP-TPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT 98 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence 5789999999999999999997643 599999876533 334567799999999999999999999965 456689999
Q ss_pred eeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCC
Q 038671 515 EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPD 594 (707)
Q Consensus 515 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 594 (707)
||+.+++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 99 e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 173 (289)
T 3og7_A 99 QWCEGSSLYHHLHAS--ETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW 173 (289)
T ss_dssp ECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC--------
T ss_pred EecCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccccc
Confidence 999999999999543 34689999999999999999999999 9999999999999999999999999999765432
Q ss_pred --CCCccccccccCCCCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCC
Q 038671 595 --SSNWAELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTP 669 (707)
Q Consensus 595 --~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (707)
........||+.|+|||.+. +..++.++||||||+++|+|++|+.||...... .............+....
T Consensus 174 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~- 249 (289)
T 3og7_A 174 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR---DQIIEMVGRGSLSPDLSK- 249 (289)
T ss_dssp ----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH---HHHHHHHHHTSCCCCTTS-
T ss_pred cccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH---HHHHHHhcccccCcchhh-
Confidence 22234457899999999886 566888999999999999999999999643221 111111111111222111
Q ss_pred CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 670 SHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 670 ~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
.....+.++.+++.+||+.||.+||++.++++.|+
T Consensus 250 --~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~ 284 (289)
T 3og7_A 250 --VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284 (289)
T ss_dssp --SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --ccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 12234456999999999999999999999999885
No 104
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.1e-40 Score=359.88 Aligned_cols=252 Identities=24% Similarity=0.434 Sum_probs=206.5
Q ss_pred hcCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVY 514 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 514 (707)
.++|++.+.||+|+||.||+|..++++.||||++.... ...+.+.+|++++++++||||+++++++. .+..++||
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~ 261 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS----MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIIT 261 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS----BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC----ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEE
Confidence 46788999999999999999998888999999987543 23567999999999999999999999986 56789999
Q ss_pred eeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCC
Q 038671 515 EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPD 594 (707)
Q Consensus 515 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 594 (707)
||+.+|+|.++++... ...+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 262 e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~ 337 (454)
T 1qcf_A 262 EFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDN 337 (454)
T ss_dssp CCCTTCBHHHHHHSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCH
T ss_pred eecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCC
Confidence 9999999999997542 23578999999999999999999999 9999999999999999999999999999875432
Q ss_pred CC-CccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchhhhhhhhhcCCCCCCCCcc
Q 038671 595 SS-NWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHN 672 (707)
Q Consensus 595 ~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (707)
.. ......+++.|+|||.+.+..++.++||||||+++|||+| |+.||..... ......... ..+++.+.
T Consensus 338 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~-----~~~~~~i~~--~~~~~~~~-- 408 (454)
T 1qcf_A 338 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN-----PEVIRALER--GYRMPRPE-- 408 (454)
T ss_dssp HHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-----HHHHHHHHH--TCCCCCCT--
T ss_pred ceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHc--CCCCCCCC--
Confidence 11 1122346778999999998899999999999999999999 9999964322 111111111 12233332
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 673 VQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 673 ~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
..+.++.+++.+||+.||++|||++++++.|+
T Consensus 409 --~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~ 440 (454)
T 1qcf_A 409 --NCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 440 (454)
T ss_dssp --TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --CCCHHHHHHHHHHccCChhHCcCHHHHHHHHH
Confidence 23456899999999999999999999999875
No 105
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.5e-40 Score=338.47 Aligned_cols=251 Identities=27% Similarity=0.477 Sum_probs=196.0
Q ss_pred cCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEEEe
Q 038671 436 NDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYE 515 (707)
Q Consensus 436 ~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 515 (707)
++|++.+.||+|+||.||+|+.. ++.||+|++... ...+.+.+|++++++++||||+++++++.+ ..++|||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e 79 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE-----SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVME 79 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST-----THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEE
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh-----hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEE
Confidence 57889999999999999999874 788999998642 245678999999999999999999998874 4889999
Q ss_pred eeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCC-eEEeccccceecCCC
Q 038671 516 YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENE-AHVSDFGTAKFLKPD 594 (707)
Q Consensus 516 ~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~-~kl~Dfg~~~~~~~~ 594 (707)
|+++++|.+++........+++..++.++.|+++||+|||+.+..||+||||||+||+++.++. +||+|||++......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~ 159 (307)
T 2eva_A 80 YAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH 159 (307)
T ss_dssp CCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred cCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence 9999999999986655456889999999999999999999932129999999999999998886 799999999765432
Q ss_pred CCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCcchH
Q 038671 595 SSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHNVQ 674 (707)
Q Consensus 595 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (707)
.....|++.|+|||.+.+..++.++||||||+++|||++|+.||+.... .... ..........+.. ..
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----~~~~-~~~~~~~~~~~~~---~~ 227 (307)
T 2eva_A 160 ---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGG-----PAFR-IMWAVHNGTRPPL---IK 227 (307)
T ss_dssp --------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCS-----SHHH-HHHHHHTTCCCCC---BT
T ss_pred ---cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCc-----cHHH-HHHHHhcCCCCCc---cc
Confidence 2334689999999999998999999999999999999999999964321 1111 1111111111111 11
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 675 DKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 675 ~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
..+..+.+++.+||+.||++|||++++++.|+
T Consensus 228 ~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 259 (307)
T 2eva_A 228 NLPKPIESLMTRCWSKDPSQRPSMEEIVKIMT 259 (307)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 23345889999999999999999999999874
No 106
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.2e-40 Score=342.48 Aligned_cols=257 Identities=24% Similarity=0.413 Sum_probs=209.6
Q ss_pred hcCCCCCceeeecCCeeEEEEEc------CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcC-CCCceeeeeeeeecC
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL------PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGFCSHA 507 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 507 (707)
.++|++.+.||+|+||.||+|+. .+++.||+|++..... ....+.+.+|+++++++ +||||+++++++..+
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 99 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH--LTEREALMSELKVLSYLGNHMNIVNLLGACTIG 99 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC--HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchh--HHHHHHHHHHHHHHhhcccCCCeeeEEEEEecC
Confidence 46799999999999999999963 3578899999875432 23457799999999999 899999999999999
Q ss_pred CceeEEEeeeccCcHHHHHhcccc---------------cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCe
Q 038671 508 RHSFIVYEYLEMGSLAMILSNDAA---------------AKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNV 572 (707)
Q Consensus 508 ~~~~lv~e~~~~~~L~~~l~~~~~---------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Ni 572 (707)
+..++||||+++|+|.+++..... ...+++..++.++.||+.||+|||++ |++||||||+||
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Ni 176 (313)
T 1t46_A 100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNI 176 (313)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGE
T ss_pred CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceE
Confidence 999999999999999999975432 12489999999999999999999999 999999999999
Q ss_pred eecCCCCeEEeccccceecCCCCCC--ccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccc
Q 038671 573 LLDLENEAHVSDFGTAKFLKPDSSN--WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISS 649 (707)
Q Consensus 573 l~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~ 649 (707)
+++.++.+||+|||++......... .....+++.|+|||.+.+..++.++||||||+++|+|++ |+.||.....
T Consensus 177 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--- 253 (313)
T 1t46_A 177 LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV--- 253 (313)
T ss_dssp EEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCS---
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccc---
Confidence 9999999999999999876544332 233457889999999999899999999999999999999 9999864321
Q ss_pred ccchhhhhhhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 650 SSSNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
................+ . ..+.++.+++.+||+.||.+|||+.++++.|+
T Consensus 254 -~~~~~~~~~~~~~~~~~--~----~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 303 (313)
T 1t46_A 254 -DSKFYKMIKEGFRMLSP--E----HAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 303 (313)
T ss_dssp -SHHHHHHHHHTCCCCCC--T----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -hhHHHHHhccCCCCCCc--c----cCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 11122222222221111 1 22345899999999999999999999999875
No 107
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.8e-40 Score=347.64 Aligned_cols=264 Identities=23% Similarity=0.378 Sum_probs=211.4
Q ss_pred cchHHHHHHHhcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCc-----hhhhHHHHHHHHHHHhcC-CCCce
Q 038671 425 KIVYEEIIRVTNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPS-----EMASQQEFLNEVKTLTGI-RHRNI 497 (707)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~~~~e~~~l~~l-~h~ni 497 (707)
...+.....+.++|++.+.||+|+||.||+|.. .+|+.||||++...... .....+.+.+|+.+++++ +||||
T Consensus 83 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~i 162 (365)
T 2y7j_A 83 LPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHI 162 (365)
T ss_dssp BCHHHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTB
T ss_pred cccchhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCE
Confidence 344555567778899999999999999999976 47999999998654321 112245688999999999 79999
Q ss_pred eeeeeeeecCCceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCC
Q 038671 498 VKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLE 577 (707)
Q Consensus 498 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~ 577 (707)
+++++++...+..++||||+++++|.+++... ..+++..++.++.||+.||+|||+. ||+||||||+||+++.+
T Consensus 163 v~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~ 236 (365)
T 2y7j_A 163 ITLIDSYESSSFMFLVFDLMRKGELFDYLTEK---VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDN 236 (365)
T ss_dssp CCEEEEEEBSSEEEEEECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTT
T ss_pred eEEEEEEeeCCEEEEEEEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCC
Confidence 99999999999999999999999999998642 4589999999999999999999999 99999999999999999
Q ss_pred CCeEEeccccceecCCCCCCccccccccCCCCcccccc------CCCCccchhHHHHHHHHHHHhCCCCCCccccccccc
Q 038671 578 NEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT------MKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSS 651 (707)
Q Consensus 578 ~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~ 651 (707)
+.+||+|||++....... ......||+.|+|||++.+ ..++.++||||||+++|+|++|+.||.....
T Consensus 237 ~~ikl~DfG~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~----- 310 (365)
T 2y7j_A 237 MQIRLSDFGFSCHLEPGE-KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ----- 310 (365)
T ss_dssp CCEEECCCTTCEECCTTC-CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-----
T ss_pred CCEEEEecCcccccCCCc-ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH-----
Confidence 999999999998766432 3345689999999998864 3578899999999999999999999863221
Q ss_pred chhhhhhhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 652 SNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
......+...............+..+.+++.+||+.||++||++.++++
T Consensus 311 ---~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 311 ---ILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp ---HHHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ---HHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1111222222222111111123456899999999999999999999986
No 108
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=2.3e-40 Score=334.65 Aligned_cols=252 Identities=23% Similarity=0.393 Sum_probs=193.6
Q ss_pred hcCCCCCceeeecCCeeEEEEEcC----CCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCce
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAELP----SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHS 510 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 510 (707)
.++|++.+.||+|+||.||+|... .+..||+|+..... .....+.+.+|+..+++++||||+++++++. ++..
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 90 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT--SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 90 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSC
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCcc
Confidence 467999999999999999999653 35579999987542 2335567999999999999999999999984 4678
Q ss_pred eEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEecccccee
Q 038671 511 FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKF 590 (707)
Q Consensus 511 ~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~ 590 (707)
++||||+.+++|.+++... ...+++..++.++.|++.||+|||+. |++||||||+||+++.++.+||+|||++..
T Consensus 91 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 165 (281)
T 1mp8_A 91 WIIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRY 165 (281)
T ss_dssp EEEEECCTTEEHHHHHHHT--TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC------
T ss_pred EEEEecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccc
Confidence 9999999999999999643 23589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC-CccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchhhhhhhhhcCC-CCC
Q 038671 591 LKPDSS-NWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNLEIALNEMLDP-RLP 667 (707)
Q Consensus 591 ~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 667 (707)
...... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... .....+... ..+
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~--------~~~~~i~~~~~~~ 237 (281)
T 1mp8_A 166 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--------DVIGRIENGERLP 237 (281)
T ss_dssp -------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--------GHHHHHHTTCCCC
T ss_pred cCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH--------HHHHHHHcCCCCC
Confidence 654322 1223456788999999998889999999999999999997 99998643221 111111111 112
Q ss_pred CCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 668 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
.+. ..+.++.+++.+||+.||++||++.++++.|+
T Consensus 238 ~~~----~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 272 (281)
T 1mp8_A 238 MPP----NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 272 (281)
T ss_dssp CCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCC----CCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 221 23456889999999999999999999999875
No 109
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=341.11 Aligned_cols=248 Identities=22% Similarity=0.266 Sum_probs=194.5
Q ss_pred hcCCCCCceeeecCCeeEEEEEcC-CCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcC-CCCceeeeeeeeecCCceeE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGFCSHARHSFI 512 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 512 (707)
.++|++.+.||+|+||+||+|... +|+.||||++........ .......|+..+.++ +||||+++++++.+++..++
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPK-DRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHH-HHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChH-HHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 367999999999999999999654 799999999876544433 334445555555555 89999999999999999999
Q ss_pred EEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecC
Q 038671 513 VYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLK 592 (707)
Q Consensus 513 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~ 592 (707)
||||+ +++|.+++... ...+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 135 v~e~~-~~~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~ 208 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAW--GASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELG 208 (311)
T ss_dssp EEECC-CCBHHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred EEecc-CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence 99999 67888887543 34699999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCcc
Q 038671 593 PDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHN 672 (707)
Q Consensus 593 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (707)
... ......||+.|+|||++.+ .++.++||||||+++|||++|..|+.... .. ..+.....+. ..
T Consensus 209 ~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~-------~~----~~~~~~~~~~--~~ 273 (311)
T 3p1a_A 209 TAG-AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE-------GW----QQLRQGYLPP--EF 273 (311)
T ss_dssp -------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH-------HH----HHHTTTCCCH--HH
T ss_pred cCC-CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc-------HH----HHHhccCCCc--cc
Confidence 432 2344579999999998876 69999999999999999999976653211 11 1111111111 11
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 673 VQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 673 ~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
....+.++.+++.+||+.||++|||++|+++.
T Consensus 274 ~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 274 TAGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 12234568999999999999999999999863
No 110
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.4e-40 Score=338.77 Aligned_cols=262 Identities=21% Similarity=0.339 Sum_probs=199.8
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIV 513 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 513 (707)
.++|++.+.||+|+||.||+|.. .+|+.||+|++..... .....+.+.+|++++++++||||+++++++...+..++|
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESED-DPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLV 80 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeecccc-chHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEE
Confidence 36799999999999999999965 5699999999876533 333456788999999999999999999999999999999
Q ss_pred EeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCC
Q 038671 514 YEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKP 593 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~ 593 (707)
|||+++++|.+++... ..+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||.+.....
T Consensus 81 ~e~~~~~~l~~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 154 (311)
T 4agu_A 81 FEYCDHTVLHELDRYQ---RGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTG 154 (311)
T ss_dssp EECCSEEHHHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC-
T ss_pred EEeCCCchHHHHHhhh---cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccC
Confidence 9999999999988643 4589999999999999999999999 999999999999999999999999999988765
Q ss_pred CCCCccccccccCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhh-------------hhhh
Q 038671 594 DSSNWAELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLE-------------IALN 659 (707)
Q Consensus 594 ~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~-------------~~~~ 659 (707)
.........|++.|+|||.+.+ ..++.++||||+|+++|+|++|+.||.............. ....
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (311)
T 4agu_A 155 PSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQ 234 (311)
T ss_dssp -----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCG
T ss_pred cccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccc
Confidence 5554556689999999999876 5679999999999999999999999964332110000000 0000
Q ss_pred hhcCCCCCCCCcc------hHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 660 EMLDPRLPTPSHN------VQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 660 ~~~~~~~~~~~~~------~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
.......+.+... .+..+.++.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 235 YFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp GGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred ccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0111111111110 1123456889999999999999999999986
No 111
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.6e-40 Score=352.08 Aligned_cols=264 Identities=19% Similarity=0.291 Sum_probs=203.4
Q ss_pred hcCCCCCceeeec--CCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCcee
Q 038671 435 TNDFDDEHCIGKG--GQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSF 511 (707)
Q Consensus 435 ~~~~~~~~~lg~G--~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 511 (707)
.++|++.+.||+| +||.||+|+. .+|+.||||++...... ....+.+.+|+++++.++||||+++++++.+++..+
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACS-NEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 102 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccC-hHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence 4679999999999 9999999965 47999999998754322 235567889999999999999999999999999999
Q ss_pred EEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceec
Q 038671 512 IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFL 591 (707)
Q Consensus 512 lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~ 591 (707)
+||||+++++|.+++.... ...+++..++.++.||+.||+|||++ ||+||||||+||+++.++.+||+|||.+...
T Consensus 103 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTHF-MDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EEEECCTTCBHHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEEccCCCCHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 9999999999999996542 24589999999999999999999999 9999999999999999999999999998654
Q ss_pred CCCC-------CCccccccccCCCCcccccc--CCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhc
Q 038671 592 KPDS-------SNWAELAGTYGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEML 662 (707)
Q Consensus 592 ~~~~-------~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 662 (707)
.... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....................
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 258 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLL 258 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC---------
T ss_pred ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccc
Confidence 3221 11233478999999999987 57899999999999999999999999643221100000000000000
Q ss_pred CCC---------------------------CC-------CCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 663 DPR---------------------------LP-------TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 663 ~~~---------------------------~~-------~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
+.. .+ .........+.++.+++.+||+.||++|||++|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~ 333 (389)
T 3gni_B 259 DTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN 333 (389)
T ss_dssp -----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 000 00 000011223456899999999999999999999985
No 112
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=2.9e-40 Score=345.30 Aligned_cols=253 Identities=23% Similarity=0.307 Sum_probs=195.2
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIV 513 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 513 (707)
.++|++.+.||+|+||.||+++. .+++.||+|++..... ..+.+.+|+..++.++||||+++++++...+..++|
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 94 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA----IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAII 94 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT----SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc----ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEE
Confidence 46799999999999999999965 4799999999875432 225678999999999999999999999999999999
Q ss_pred EeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCC--eEEeccccceec
Q 038671 514 YEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENE--AHVSDFGTAKFL 591 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~--~kl~Dfg~~~~~ 591 (707)
|||+.+|+|.+++... +.+++..++.++.|++.||+|||++ ||+||||||+||+++.++. +||+|||+++..
T Consensus 95 ~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~ 168 (361)
T 3uc3_A 95 MEYASGGELYERICNA---GRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSS 168 (361)
T ss_dssp EECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC---
T ss_pred EEeCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccc
Confidence 9999999999998543 3589999999999999999999999 9999999999999987765 999999999754
Q ss_pred CCCCCCccccccccCCCCccccccCCCCcc-chhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCC
Q 038671 592 KPDSSNWAELAGTYGYVAPELAYTMKVTEK-CDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPS 670 (707)
Q Consensus 592 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~-~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (707)
... .......||+.|+|||++.+..++.+ +||||+|+++|+|++|+.||..... ..................+.
T Consensus 169 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~----~~~~~~~~~~~~~~~~~~~~ 243 (361)
T 3uc3_A 169 VLH-SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEE----PRDYRKTIQRILSVKYSIPD 243 (361)
T ss_dssp -------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC--------CCCHHHHHHHHHTTCCCCCT
T ss_pred ccc-CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCcc----HHHHHHHHHHHhcCCCCCCC
Confidence 322 22344579999999999988877655 8999999999999999999974332 12222333333333322221
Q ss_pred cchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 671 HNVQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 671 ~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
. ...+.++.+++.+||+.||++|||+.|+++.
T Consensus 244 ~--~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 244 D--IRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp T--SCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred c--CCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 1 1123458899999999999999999999863
No 113
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=4.5e-41 Score=357.65 Aligned_cols=262 Identities=22% Similarity=0.271 Sum_probs=206.8
Q ss_pred HHHHHhcCCCCCceeeecCCeeEEEEEcC-CCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCC
Q 038671 430 EIIRVTNDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHAR 508 (707)
Q Consensus 430 ~~~~~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 508 (707)
++....++|++.+.||+|+||.||+|+.+ +++.||+|++.............+.+|..++..++||||+++++++.+++
T Consensus 68 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~ 147 (437)
T 4aw2_A 68 QMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDN 147 (437)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSS
T ss_pred cccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC
Confidence 33445688999999999999999999654 58899999986421111122234888999999999999999999999999
Q ss_pred ceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccc
Q 038671 509 HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTA 588 (707)
Q Consensus 509 ~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~ 588 (707)
..|+||||+.||+|.+++... ...+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 148 ~~~lV~Ey~~gg~L~~~l~~~--~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGla 222 (437)
T 4aw2_A 148 NLYLVMDYYVGGDLLTLLSKF--EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSC 222 (437)
T ss_dssp EEEEEECCCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEEecCCCCcHHHHHHHc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhhh
Confidence 999999999999999999653 24589999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCC-ccccccccCCCCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhc
Q 038671 589 KFLKPDSSN-WAELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEML 662 (707)
Q Consensus 589 ~~~~~~~~~-~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 662 (707)
+........ ....+||+.|+|||++. ...++.++||||||+++|||++|+.||..... ............
T Consensus 223 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~----~~~~~~i~~~~~ 298 (437)
T 4aw2_A 223 LKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL----VETYGKIMNHKE 298 (437)
T ss_dssp EECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSH----HHHHHHHHTHHH
T ss_pred hhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCCh----hHHHHhhhhccc
Confidence 876544332 23468999999999987 45689999999999999999999999964221 111122221111
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHhccCCCCCC--CCCHHHHHH
Q 038671 663 DPRLPTPSHNVQDKLISIMEVAISCLDESPES--RPTIQKVSQ 703 (707)
Q Consensus 663 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~--Rps~~~l~~ 703 (707)
...++... ...+.++.+++.+|+..+|++ ||+++|+++
T Consensus 299 ~~~~p~~~---~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 299 RFQFPTQV---TDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp HCCCCSSC---CCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred cccCCccc---ccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 12222211 112345889999999988888 999999876
No 114
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=3.7e-40 Score=354.98 Aligned_cols=248 Identities=29% Similarity=0.438 Sum_probs=202.4
Q ss_pred hcCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCC-ceeEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHAR-HSFIV 513 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~lv 513 (707)
.++|++.+.||+|+||.||+|... |+.||||++.... ..+.+.+|++++++++||||+++++++.... ..++|
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv 265 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 265 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT-----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch-----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEE
Confidence 467888999999999999999875 7899999987542 3467899999999999999999999987655 78999
Q ss_pred EeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCC
Q 038671 514 YEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKP 593 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~ 593 (707)
|||+++|+|.+++.... ...+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 266 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 341 (450)
T 1k9a_A 266 TEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 341 (450)
T ss_dssp EECCTTCBHHHHHHHHC-TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC-
T ss_pred EEecCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcccccc
Confidence 99999999999997532 23478999999999999999999999 999999999999999999999999999986442
Q ss_pred CCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchhhhhhhhhcCCCCCCCCcc
Q 038671 594 DSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHN 672 (707)
Q Consensus 594 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (707)
.. ....+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... .. ........ .+++.+.
T Consensus 342 ~~---~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~----~~-~~~~i~~~--~~~~~p~-- 409 (450)
T 1k9a_A 342 TQ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL----KD-VVPRVEKG--YKMDAPD-- 409 (450)
T ss_dssp --------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCT----TT-HHHHHHTT--CCCCCCT--
T ss_pred cc---cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH----HH-HHHHHHcC--CCCCCCC--
Confidence 21 22357889999999999999999999999999999998 9999974322 11 11111111 1222222
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 673 VQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 673 ~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
..+.++.+++.+||+.||++|||+.++++.|+
T Consensus 410 --~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~ 441 (450)
T 1k9a_A 410 --GCPPAVYDVMKNCWHLDAATRPTFLQLREQLE 441 (450)
T ss_dssp --TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 23456899999999999999999999998875
No 115
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=4.2e-40 Score=341.33 Aligned_cols=256 Identities=23% Similarity=0.382 Sum_probs=206.2
Q ss_pred hcCCCCCceeeecCCeeEEEEEc--------CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcC-CCCceeeeeeeee
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL--------PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGFCS 505 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~ 505 (707)
.++|++.+.||+|+||.||+|+. .+++.||+|++.... .....+.+.+|+++++++ +||||+++++++.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 111 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 111 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC--cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEc
Confidence 46899999999999999999965 357789999987543 233557789999999999 8999999999999
Q ss_pred cCCceeEEEeeeccCcHHHHHhcccc-------------cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCe
Q 038671 506 HARHSFIVYEYLEMGSLAMILSNDAA-------------AKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNV 572 (707)
Q Consensus 506 ~~~~~~lv~e~~~~~~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Ni 572 (707)
..+..++||||+++++|.+++..... ...+++..++.++.||+.||+|||+. ||+||||||+||
T Consensus 112 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NI 188 (334)
T 2pvf_A 112 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNV 188 (334)
T ss_dssp SSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGE
T ss_pred cCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceE
Confidence 99999999999999999999975432 23489999999999999999999999 999999999999
Q ss_pred eecCCCCeEEeccccceecCCCCCC--ccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccc
Q 038671 573 LLDLENEAHVSDFGTAKFLKPDSSN--WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISS 649 (707)
Q Consensus 573 l~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~ 649 (707)
+++.++.+||+|||++......... .....+++.|+|||.+.+..++.++||||||+++|+|++ |+.||.....
T Consensus 189 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--- 265 (334)
T 2pvf_A 189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--- 265 (334)
T ss_dssp EECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH---
T ss_pred EEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH---
Confidence 9999999999999999876543321 223456788999999988889999999999999999999 9999864221
Q ss_pred ccchhhhhhhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 650 SSSNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
............... +. ..+.++.+++.+||+.||.+||++.++++.|+
T Consensus 266 --~~~~~~~~~~~~~~~--~~----~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 314 (334)
T 2pvf_A 266 --EELFKLLKEGHRMDK--PA----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314 (334)
T ss_dssp --HHHHHHHHHTCCCCC--CT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --HHHHHHHhcCCCCCC--Cc----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 111111111111111 11 22345889999999999999999999999875
No 116
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.2e-40 Score=338.13 Aligned_cols=257 Identities=18% Similarity=0.235 Sum_probs=205.6
Q ss_pred hcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcC-CCCceeeeeeeeecCCceeE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGFCSHARHSFI 512 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 512 (707)
.++|++.+.||+|+||.||+|. ..+|+.||+|++..... .+.+.+|++.++.+ +|++++++++++......++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~l 83 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVL 83 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc-----cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEE
Confidence 4679999999999999999996 46799999999865322 23477899999999 79999999999999999999
Q ss_pred EEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCC-----eEEecccc
Q 038671 513 VYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENE-----AHVSDFGT 587 (707)
Q Consensus 513 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~-----~kl~Dfg~ 587 (707)
||||+ +++|.+++... ...+++..++.++.||+.||+|||++ ||+||||||+||+++.++. +||+|||+
T Consensus 84 v~e~~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~ 157 (298)
T 1csn_A 84 VIDLL-GPSLEDLLDLC--GRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM 157 (298)
T ss_dssp EEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTT
T ss_pred EEEec-CCCHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcc
Confidence 99999 99999999643 34589999999999999999999999 9999999999999988776 99999999
Q ss_pred ceecCCCCC-------CccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhh
Q 038671 588 AKFLKPDSS-------NWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNE 660 (707)
Q Consensus 588 ~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 660 (707)
+........ ......||+.|+|||.+.+..++.++||||||+++|||++|+.||........ ..........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~ 236 (298)
T 1csn_A 158 VKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN-KQKYERIGEK 236 (298)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH-HHHHHHHHHH
T ss_pred ccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcccc-HHHHHHHHhh
Confidence 987664432 13445799999999999998999999999999999999999999975332111 0111111111
Q ss_pred hcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 661 MLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
......+ ......+.++.+++.+||+.||++||+++++++.|+
T Consensus 237 ~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~ 279 (298)
T 1csn_A 237 KQSTPLR---ELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFS 279 (298)
T ss_dssp HHHSCHH---HHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred ccCccHH---HHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence 1101000 001123456899999999999999999999998874
No 117
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=343.95 Aligned_cols=247 Identities=21% Similarity=0.318 Sum_probs=204.7
Q ss_pred HHhcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchh-----hhHHHHHHHHHHHhcCCCCceeeeeeeeec
Q 038671 433 RVTNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEM-----ASQQEFLNEVKTLTGIRHRNIVKFYGFCSH 506 (707)
Q Consensus 433 ~~~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 506 (707)
...++|++.+.||+|+||.||+|. ..+++.||+|++........ .....+.+|++++++++||||+++++++.+
T Consensus 21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~ 100 (335)
T 3dls_A 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN 100 (335)
T ss_dssp HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee
Confidence 356789999999999999999995 56789999999876432211 123457789999999999999999999999
Q ss_pred CCceeEEEeeeccC-cHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEecc
Q 038671 507 ARHSFIVYEYLEMG-SLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDF 585 (707)
Q Consensus 507 ~~~~~lv~e~~~~~-~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Df 585 (707)
.+..++||||+.+| +|.+++... ..+++..++.++.||+.||+|||+. ||+||||||+||+++.++.+||+||
T Consensus 101 ~~~~~lv~e~~~~g~~l~~~~~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Df 174 (335)
T 3dls_A 101 QGFFQLVMEKHGSGLDLFAFIDRH---PRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDF 174 (335)
T ss_dssp SSEEEEEEECCTTSCBHHHHHHTC---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCC
T ss_pred CCEEEEEEEeCCCCccHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeec
Confidence 99999999999766 999998653 3589999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCccccccccCCCCccccccCCC-CccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCC
Q 038671 586 GTAKFLKPDSSNWAELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDP 664 (707)
Q Consensus 586 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 664 (707)
|++....... ......||+.|+|||.+.+..+ +.++||||||+++|+|++|+.||..... ....
T Consensus 175 g~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------------~~~~ 239 (335)
T 3dls_A 175 GSAAYLERGK-LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE--------------TVEA 239 (335)
T ss_dssp TTCEECCTTC-CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG--------------GTTT
T ss_pred ccceECCCCC-ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH--------------HHhh
Confidence 9998765443 3345679999999999988776 7899999999999999999999863211 1111
Q ss_pred CCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 665 RLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 665 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
....+.. .+.++.+++.+||+.||++|||++++++.
T Consensus 240 ~~~~~~~----~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 240 AIHPPYL----VSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp CCCCSSC----CCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ccCCCcc----cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1122211 23458899999999999999999999874
No 118
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=2.8e-40 Score=337.94 Aligned_cols=260 Identities=23% Similarity=0.370 Sum_probs=205.0
Q ss_pred cCCCCCceeeecCCeeEEEEE-----cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecC--C
Q 038671 436 NDFDDEHCIGKGGQGSVYKAE-----LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHA--R 508 (707)
Q Consensus 436 ~~~~~~~~lg~G~~g~vy~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~ 508 (707)
+.|++.+.||+|+||.||+|+ ..+++.||+|++..... ....+.+.+|+++++.++||||+++++++... .
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 98 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG--GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN 98 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---C
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEeccccc--chhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCc
Confidence 458899999999999999997 35689999999875432 23456789999999999999999999999876 6
Q ss_pred ceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccc
Q 038671 509 HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTA 588 (707)
Q Consensus 509 ~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~ 588 (707)
..++||||+++++|.+++... ...+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++
T Consensus 99 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 173 (302)
T 4e5w_A 99 GIKLIMEFLPSGSLKEYLPKN--KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLT 173 (302)
T ss_dssp CEEEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred eEEEEEEeCCCCcHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECccccc
Confidence 689999999999999999543 24589999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCC---CccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccc-------cccccchhhhhh
Q 038671 589 KFLKPDSS---NWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISS-------ISSSSSNLEIAL 658 (707)
Q Consensus 589 ~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~-------~~~~~~~~~~~~ 658 (707)
........ ......+|..|+|||.+.+..++.++||||||+++|+|++|..|+..... ............
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (302)
T 4e5w_A 174 KAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLV 253 (302)
T ss_dssp EECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHH
T ss_pred ccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHH
Confidence 88765432 22345678889999999998899999999999999999999998642110 000111111222
Q ss_pred hhhcCC-CCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 659 NEMLDP-RLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 659 ~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
...... ..+.+. ..+.++.+++.+||+.||.+|||+.++++.|+
T Consensus 254 ~~~~~~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 298 (302)
T 4e5w_A 254 NTLKEGKRLPCPP----NCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFE 298 (302)
T ss_dssp HHHHTTCCCCCCT----TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred HHHhccCCCCCCC----CCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence 222221 222222 23356899999999999999999999999885
No 119
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=2e-40 Score=335.57 Aligned_cols=254 Identities=22% Similarity=0.316 Sum_probs=204.1
Q ss_pred hcCCCCCceeeecCCeeEEEEEcC-CCcEEEEEecCCCCCch---hhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCce
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSE---MASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHS 510 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 510 (707)
.++|++.+.||+|+||.||+|... +|+.||+|++....... ....+.+.+|++++++++||||+++++++...+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 357999999999999999999654 79999999986543221 12357789999999999999999999999999999
Q ss_pred eEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCC----CeEEeccc
Q 038671 511 FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLEN----EAHVSDFG 586 (707)
Q Consensus 511 ~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~----~~kl~Dfg 586 (707)
++||||+++++|.+++... ..+++..++.++.||+.||+|||+. |++||||||+||+++.++ .+||+|||
T Consensus 84 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg 157 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEK---ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157 (283)
T ss_dssp EEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEeecCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecc
Confidence 9999999999999998642 4589999999999999999999999 999999999999998877 89999999
Q ss_pred cceecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCC
Q 038671 587 TAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRL 666 (707)
Q Consensus 587 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (707)
.+....... ......|++.|+|||.+.+..++.++||||||+++|+|++|+.||..... ......+.....
T Consensus 158 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~~~~ 228 (283)
T 3bhy_A 158 IAHKIEAGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK--------QETLTNISAVNY 228 (283)
T ss_dssp TCEECC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHHTTCC
T ss_pred cceeccCCC-cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch--------HHHHHHhHhccc
Confidence 998765432 23445789999999999988899999999999999999999999864221 112222222222
Q ss_pred CCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 667 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
..+.......+..+.+++.+||+.||++||++.++++
T Consensus 229 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 229 DFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp CCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 2211111233456899999999999999999999986
No 120
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.5e-40 Score=331.87 Aligned_cols=250 Identities=25% Similarity=0.425 Sum_probs=206.2
Q ss_pred cCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEEEe
Q 038671 436 NDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYE 515 (707)
Q Consensus 436 ~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 515 (707)
++|++.+.||+|+||.||+|...+++.||+|++..... ..+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM----SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTE 83 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEC
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC----CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEe
Confidence 57889999999999999999888889999999976432 23578899999999999999999999999999999999
Q ss_pred eeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCC
Q 038671 516 YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDS 595 (707)
Q Consensus 516 ~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~ 595 (707)
|+++++|.+++... ...+++..++.++.|++.||+|||+. |++||||||+||+++.++.+||+|||.+.......
T Consensus 84 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 158 (267)
T 3t9t_A 84 FMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ 158 (267)
T ss_dssp CCTTCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH
T ss_pred CCCCCcHHHHHhhC--cccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccccc
Confidence 99999999999643 24589999999999999999999999 99999999999999999999999999998654321
Q ss_pred -CCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchhhhhhhhhcCC-CCCCCCcc
Q 038671 596 -SNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNLEIALNEMLDP-RLPTPSHN 672 (707)
Q Consensus 596 -~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 672 (707)
.......+++.|+|||.+.+..++.++||||||+++|+|++ |+.||..... ......+... ....+.
T Consensus 159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~i~~~~~~~~~~-- 228 (267)
T 3t9t_A 159 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN--------SEVVEDISTGFRLYKPR-- 228 (267)
T ss_dssp HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHHHHTTCCCCCCT--
T ss_pred ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH--------HHHHHHHhcCCcCCCCc--
Confidence 11223456788999999998889999999999999999999 8999864221 1111122211 111111
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 673 VQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 673 ~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
..+..+.+++.+||+.||++||+++++++.|+
T Consensus 229 --~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~ 260 (267)
T 3t9t_A 229 --LASTHVYQIMNHCWRERPEDRPAFSRLLRQLA 260 (267)
T ss_dssp --TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --cCcHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 12345889999999999999999999999874
No 121
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.7e-40 Score=361.09 Aligned_cols=256 Identities=21% Similarity=0.275 Sum_probs=207.5
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIV 513 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 513 (707)
.++|++.+.||+|+||.||+|+. .+|+.||+|++.............+.+|+++++.++||||+++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 46799999999999999999965 57999999998643222223456688999999999999999999999999999999
Q ss_pred EeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCC
Q 038671 514 YEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKP 593 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~ 593 (707)
|||++||+|.+++.... ...+++..++.++.||+.||+|||++ ||+||||||+||+++.+|.+||+|||++.....
T Consensus 263 mEy~~gg~L~~~l~~~~-~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMG-QAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp ECCCCSCBHHHHHHSSS-SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEcCCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence 99999999999987543 24589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCcch
Q 038671 594 DSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHNV 673 (707)
Q Consensus 594 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (707)
.. .....+||+.|+|||++.+..++.++||||||+++|||++|+.||...... .........+.......+.
T Consensus 339 ~~-~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~----~~~~~i~~~i~~~~~~~p~--- 410 (576)
T 2acx_A 339 GQ-TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK----IKREEVERLVKEVPEEYSE--- 410 (576)
T ss_dssp TC-CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSC----CCHHHHHHHHHHCCCCCCT---
T ss_pred Cc-cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccc----hhHHHHHHHhhcccccCCc---
Confidence 32 334568999999999999988999999999999999999999999743221 1111111111111111111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 038671 674 QDKLISIMEVAISCLDESPESRP-----TIQKVSQ 703 (707)
Q Consensus 674 ~~~~~~l~~li~~cl~~~P~~Rp-----s~~~l~~ 703 (707)
..+.++.+++.+||+.||++|| +++|+++
T Consensus 411 -~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 411 -RFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp -TSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred -cCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 2334588999999999999999 7888875
No 122
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=6e-40 Score=329.94 Aligned_cols=251 Identities=19% Similarity=0.289 Sum_probs=203.7
Q ss_pred hcCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecC--CceeE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHA--RHSFI 512 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~l 512 (707)
.++|++.+.||+|+||.||+|+.. ++.||+|++...... ....+.+.+|+.++++++||||+++++++.+. +..++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWS-TRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL 86 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCC-HHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccC-HHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEe
Confidence 357999999999999999999875 889999999765333 33456799999999999999999999999876 78899
Q ss_pred EEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCC--eEecCCCCCCeeecCCCCeEEecccccee
Q 038671 513 VYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPP--IVHRDISSKNVLLDLENEAHVSDFGTAKF 590 (707)
Q Consensus 513 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~ 590 (707)
||||+++++|.+++.... ...+++..++.++.|++.||+|||+. + ++||||||+||+++.++.++++|||++..
T Consensus 87 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 87 ITHWMPYGSLYNVLHEGT-NFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFS 162 (271)
T ss_dssp EEECCTTCBHHHHHHSCS-SCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred eecccCCCcHHHHHhhcc-cCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceee
Confidence 999999999999997533 23589999999999999999999998 8 99999999999999999999999998764
Q ss_pred cCCCCCCccccccccCCCCccccccCCCCc---cchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCC
Q 038671 591 LKPDSSNWAELAGTYGYVAPELAYTMKVTE---KCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLP 667 (707)
Q Consensus 591 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~---~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (707)
... ....||+.|+|||.+.+..++. ++||||||+++|||++|+.||..... .............+..+
T Consensus 163 ~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~ 233 (271)
T 3kmu_A 163 FQS-----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN----MEIGMKVALEGLRPTIP 233 (271)
T ss_dssp TSC-----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH----HHHHHHHHHSCCCCCCC
T ss_pred ecc-----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh----HHHHHHHHhcCCCCCCC
Confidence 322 2347899999999988765544 79999999999999999999964321 11111111121222222
Q ss_pred CCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 668 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
. ..+.++.+++.+||+.||++|||++++++.|+
T Consensus 234 ~------~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~ 266 (271)
T 3kmu_A 234 P------GISPHVSKLMKICMNEDPAKRPKFDMIVPILE 266 (271)
T ss_dssp T------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred C------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1 23345899999999999999999999999875
No 123
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=3.2e-40 Score=334.16 Aligned_cols=249 Identities=24% Similarity=0.397 Sum_probs=205.2
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIV 513 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 513 (707)
.++|++.+.||+|+||.||+|.. .+++.||+|++.............+.+|++++++++||||+++++++.+.+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 36799999999999999999955 46889999998543222222346789999999999999999999999999999999
Q ss_pred EeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCC
Q 038671 514 YEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKP 593 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~ 593 (707)
|||+++++|.+++... ..+++..++.++.|++.||+|||+. |++||||||+||+++.++.+||+|||++.....
T Consensus 93 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (284)
T 2vgo_A 93 LEFAPRGELYKELQKH---GRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS 166 (284)
T ss_dssp ECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSS
T ss_pred EEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCcc
Confidence 9999999999998643 3589999999999999999999999 999999999999999999999999999976543
Q ss_pred CCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCcch
Q 038671 594 DSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHNV 673 (707)
Q Consensus 594 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (707)
. ......|++.|+|||.+.+..++.++||||||+++|+|++|+.||+.... ......+.......+..
T Consensus 167 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~~~~~~~~~~~~~~~~~-- 234 (284)
T 2vgo_A 167 L--RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH--------TETHRRIVNVDLKFPPF-- 234 (284)
T ss_dssp S--CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHHTTCCCCCTT--
T ss_pred c--ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCH--------hHHHHHHhccccCCCCc--
Confidence 2 23445789999999999998899999999999999999999999964221 11122222222222221
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 674 QDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 674 ~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
.+.++.+++.+||+.||.+||+++++++
T Consensus 235 --~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 235 --LSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp --SCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred --CCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 2345889999999999999999999986
No 124
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.1e-40 Score=363.70 Aligned_cols=254 Identities=24% Similarity=0.368 Sum_probs=210.6
Q ss_pred HhcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeE
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFI 512 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 512 (707)
+.++|++.+.||+|+||.||+|.. .+|+.||||++...........+.+.+|++++++++||||+++++++.+.+..++
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 346799999999999999999965 4799999999876544434456789999999999999999999999999999999
Q ss_pred EEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeee---cCCCCeEEeccccce
Q 038671 513 VYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLL---DLENEAHVSDFGTAK 589 (707)
Q Consensus 513 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~---~~~~~~kl~Dfg~~~ 589 (707)
||||+.+++|.+++... ..+++..++.++.||+.||+|||++ ||+||||||+||++ +.++.+||+|||++.
T Consensus 104 v~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 177 (484)
T 3nyv_A 104 VGEVYTGGELFDEIISR---KRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLST 177 (484)
T ss_dssp EECCCCSCBHHHHHHTC---SCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred EEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence 99999999999998653 3589999999999999999999999 99999999999999 567899999999998
Q ss_pred ecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCC
Q 038671 590 FLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTP 669 (707)
Q Consensus 590 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (707)
..... .......||+.|+|||++.+ .++.++||||+|+++|+|++|+.||..... ......+.......+
T Consensus 178 ~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~~i~~~~~~~~ 247 (484)
T 3nyv_A 178 HFEAS-KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE--------YDILKKVEKGKYTFE 247 (484)
T ss_dssp HBCCC-CSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCCCC
T ss_pred Ecccc-cccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHcCCCCCC
Confidence 76543 33455679999999999876 699999999999999999999999964221 222222333333322
Q ss_pred CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 670 SHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 670 ~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
.......+.++.+++.+||+.||++|||+.|+++
T Consensus 248 ~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 248 LPQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 2233345567899999999999999999999986
No 125
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.6e-41 Score=357.01 Aligned_cols=261 Identities=23% Similarity=0.265 Sum_probs=205.1
Q ss_pred HHHHHhcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCC
Q 038671 430 EIIRVTNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHAR 508 (707)
Q Consensus 430 ~~~~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 508 (707)
+.....++|++.+.||+|+||.||+|+. .+|+.||+|++...........+.+.+|..++..++||||+++++++.+.+
T Consensus 55 ~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~ 134 (412)
T 2vd5_A 55 EVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDEN 134 (412)
T ss_dssp HHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSS
T ss_pred hccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC
Confidence 3334468899999999999999999965 579999999986422112223345788999999999999999999999999
Q ss_pred ceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccc
Q 038671 509 HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTA 588 (707)
Q Consensus 509 ~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~ 588 (707)
..|+||||++||+|.+++... ...+++..++.++.||+.||+|||+. ||+||||||+||+++.++.+||+|||++
T Consensus 135 ~~~lVmE~~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGla 209 (412)
T 2vd5_A 135 YLYLVMEYYVGGDLLTLLSKF--GERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGSC 209 (412)
T ss_dssp EEEEEECCCCSCBHHHHHHHH--SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEEcCCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechhh
Confidence 999999999999999999643 23689999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCC-ccccccccCCCCccccc-------cCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhh
Q 038671 589 KFLKPDSSN-WAELAGTYGYVAPELAY-------TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNE 660 (707)
Q Consensus 589 ~~~~~~~~~-~~~~~g~~~y~aPE~~~-------~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 660 (707)
+........ ....+||+.|+|||++. +..++.++||||||+++|||++|+.||..... ..........
T Consensus 210 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~----~~~~~~i~~~ 285 (412)
T 2vd5_A 210 LKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST----AETYGKIVHY 285 (412)
T ss_dssp EECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSH----HHHHHHHHTH
T ss_pred eeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCH----HHHHHHHHhc
Confidence 877644332 23468999999999987 35689999999999999999999999964221 1111111111
Q ss_pred hcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCC---CCHHHHHH
Q 038671 661 MLDPRLPTPSHNVQDKLISIMEVAISCLDESPESR---PTIQKVSQ 703 (707)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R---ps~~~l~~ 703 (707)
......+.. ....+.++.+++.+||. +|++| |+++|+++
T Consensus 286 ~~~~~~p~~---~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 286 KEHLSLPLV---DEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp HHHCCCC-------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred ccCcCCCcc---ccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 111122211 11234568899999999 99998 58998875
No 126
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.9e-40 Score=342.62 Aligned_cols=253 Identities=24% Similarity=0.451 Sum_probs=197.8
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-CCCc----EEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCc
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-PSGE----IVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARH 509 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 509 (707)
.++|++.+.||+|+||.||+|+. .+++ +||+|.+.... .....+++.+|+.++++++||||+++++++....
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 90 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGICLTST- 90 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC---------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-
Confidence 35799999999999999999964 3444 36888876432 2234567899999999999999999999998754
Q ss_pred eeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccce
Q 038671 510 SFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAK 589 (707)
Q Consensus 510 ~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~ 589 (707)
.++++||+.+|+|.+++... ...+++..++.++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++
T Consensus 91 ~~~v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 165 (327)
T 3poz_A 91 VQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHS--TTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHH
T ss_pred eEEEEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCccee
Confidence 78999999999999999653 24689999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCCC--ccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchhhhhhhhhcCCCC
Q 038671 590 FLKPDSSN--WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNLEIALNEMLDPRL 666 (707)
Q Consensus 590 ~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (707)
........ .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||+.... .......... ...
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-----~~~~~~~~~~--~~~ 238 (327)
T 3poz_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-----SEISSILEKG--ERL 238 (327)
T ss_dssp HHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----GGHHHHHHTT--CCC
T ss_pred EccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCH-----HHHHHHHHcC--CCC
Confidence 76544322 223456789999999999999999999999999999999 9999974322 1111222211 122
Q ss_pred CCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 667 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
+.+.. .+.++.+++.+||+.||++||++.++++.|+
T Consensus 239 ~~~~~----~~~~~~~li~~~l~~~p~~Rps~~ell~~l~ 274 (327)
T 3poz_A 239 PQPPI----CTIDVYMIMVKCWMIDADSRPKFRELIIEFS 274 (327)
T ss_dssp CCCTT----BCHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred CCCcc----CCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 22222 2345889999999999999999999998874
No 127
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=6.8e-41 Score=338.30 Aligned_cols=257 Identities=27% Similarity=0.373 Sum_probs=205.7
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeee--cCCcee
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCS--HARHSF 511 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~~~ 511 (707)
.++|++.+.||+|+||.||+|.. .+++.||+|++...... ....+.+.+|++++++++||||+++++++. ..+..+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 83 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT-EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY 83 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCC-HHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEE
Confidence 46799999999999999999955 57899999998764433 335677999999999999999999999874 456889
Q ss_pred EEEeeeccCcHHHHHhcccc-cCCCChHHHHHHHHHHHHHHHHHHhCCCCC-----eEecCCCCCCeeecCCCCeEEecc
Q 038671 512 IVYEYLEMGSLAMILSNDAA-AKDLGWTKRMNVIKGVVDALSYMHNDCFPP-----IVHRDISSKNVLLDLENEAHVSDF 585 (707)
Q Consensus 512 lv~e~~~~~~L~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-----ivH~dlk~~Nil~~~~~~~kl~Df 585 (707)
+||||+++++|.+++..... ...+++..++.++.|++.||+|||+. + ++||||||+||+++.++.+||+||
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~df 160 (279)
T 2w5a_A 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDF 160 (279)
T ss_dssp EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCC
T ss_pred EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecC
Confidence 99999999999999965432 34589999999999999999999999 7 999999999999999999999999
Q ss_pred ccceecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCC
Q 038671 586 GTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPR 665 (707)
Q Consensus 586 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (707)
|.+..............|++.|+|||.+.+..++.++||||||+++|+|++|+.||..... ............+.
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~i~~~~~~~ 235 (279)
T 2w5a_A 161 GLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ-----KELAGKIREGKFRR 235 (279)
T ss_dssp CHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHTCCCC
T ss_pred chheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH-----HHHHHHHhhccccc
Confidence 9998765443333445789999999999988899999999999999999999999864321 11111111111112
Q ss_pred CCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 666 LPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 666 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
++. ..+.++.+++.+||+.||++||+++|+++.+.
T Consensus 236 ~~~------~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 236 IPY------RYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp CCT------TSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred CCc------ccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 221 23356899999999999999999999998764
No 128
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=9.5e-40 Score=345.87 Aligned_cols=253 Identities=21% Similarity=0.267 Sum_probs=191.7
Q ss_pred hcCCCCC-ceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhc-CCCCceeeeeeeeec----C
Q 038671 435 TNDFDDE-HCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTG-IRHRNIVKFYGFCSH----A 507 (707)
Q Consensus 435 ~~~~~~~-~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~----~ 507 (707)
.++|.+. +.||+|+||.||++. ..+|+.||||++... ..+.+|+.++.+ .+||||+++++++.. .
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~--------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~ 131 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAGR 131 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc--------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCC
Confidence 3567666 689999999999995 457899999998532 345677877644 489999999998865 5
Q ss_pred CceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecC---CCCeEEec
Q 038671 508 RHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDL---ENEAHVSD 584 (707)
Q Consensus 508 ~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~---~~~~kl~D 584 (707)
+..|+||||+.||+|.+++.... ...+++..++.++.||+.||+|||+. ||+||||||+||+++. ++.+||+|
T Consensus 132 ~~~~lv~E~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~D 207 (400)
T 1nxk_A 132 KCLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTD 207 (400)
T ss_dssp EEEEEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECC
T ss_pred cEEEEEEEeCCCCcHHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEe
Confidence 67899999999999999997543 34589999999999999999999999 9999999999999987 78999999
Q ss_pred cccceecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCC
Q 038671 585 FGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDP 664 (707)
Q Consensus 585 fg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 664 (707)
||+++..... ......+||+.|+|||++.+..++.++||||||+++|+|++|+.||................. ..
T Consensus 208 FG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~----~~ 282 (400)
T 1nxk_A 208 FGFAKETTSH-NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR----MG 282 (400)
T ss_dssp CTTCEECC------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHH----HT
T ss_pred cccccccCCC-CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHH----cC
Confidence 9999876533 223456889999999999999999999999999999999999999975433221111111111 11
Q ss_pred CCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 665 RLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 665 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
....+.......+.++.+++.+||+.||++|||+.|+++.
T Consensus 283 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 283 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp CCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred cccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1111111112334568999999999999999999999863
No 129
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=3.7e-40 Score=342.38 Aligned_cols=249 Identities=28% Similarity=0.450 Sum_probs=201.9
Q ss_pred cCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEEE
Q 038671 436 NDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVY 514 (707)
Q Consensus 436 ~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 514 (707)
+.|+..+.||+|+||.||+|+ ..+|+.||||++...........+.+.+|++++++++||||+++++++..++..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 458899999999999999996 4689999999987654444455678999999999999999999999999999999999
Q ss_pred eeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCC
Q 038671 515 EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPD 594 (707)
Q Consensus 515 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 594 (707)
||+. |++.+++... ...+++..++.++.|+++||+|||+. ||+||||||+||+++.++.+||+|||++......
T Consensus 134 e~~~-g~l~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 207 (348)
T ss_dssp ECCS-EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB
T ss_pred ecCC-CCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCC
Confidence 9997 5777777432 34689999999999999999999999 9999999999999999999999999999765432
Q ss_pred CCCccccccccCCCCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCc
Q 038671 595 SSNWAELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSH 671 (707)
Q Consensus 595 ~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (707)
....||+.|+|||++. +..++.++||||||+++|||++|+.||...... ..... ......+....
T Consensus 208 ----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~----~~~~~-~~~~~~~~~~~--- 275 (348)
T 1u5q_A 208 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM----SALYH-IAQNESPALQS--- 275 (348)
T ss_dssp ----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHHH-HHHSCCCCCCC---
T ss_pred ----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH----HHHHH-HHhcCCCCCCC---
Confidence 3457999999999874 566899999999999999999999998642211 01111 11111111111
Q ss_pred chHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 672 NVQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 672 ~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
...+..+.+++.+||+.||++|||++++++.
T Consensus 276 --~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 276 --GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp --TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred --CCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 1223458899999999999999999999863
No 130
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.1e-40 Score=344.18 Aligned_cols=259 Identities=20% Similarity=0.349 Sum_probs=209.3
Q ss_pred HHHhcCCCCCceeeecCCeeEEEEEcC------CCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeee
Q 038671 432 IRVTNDFDDEHCIGKGGQGSVYKAELP------SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCS 505 (707)
Q Consensus 432 ~~~~~~~~~~~~lg~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~ 505 (707)
....++|++.+.||+|+||.||+|... +++.||+|++.... .......+.+|+++++.++||||+++++++.
T Consensus 21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 98 (322)
T 1p4o_A 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVS 98 (322)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred cchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc--CHHHHHHHHHHHHHHHhcCCCCEeeeEEEEc
Confidence 445678999999999999999999543 47889999987543 2234567899999999999999999999999
Q ss_pred cCCceeEEEeeeccCcHHHHHhcccc-------cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCC
Q 038671 506 HARHSFIVYEYLEMGSLAMILSNDAA-------AKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLEN 578 (707)
Q Consensus 506 ~~~~~~lv~e~~~~~~L~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~ 578 (707)
+.+..++||||+++++|.+++..... ...+++..++.++.||+.||+|||++ ||+||||||+||+++.++
T Consensus 99 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~ 175 (322)
T 1p4o_A 99 QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDF 175 (322)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTC
T ss_pred cCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCC
Confidence 99999999999999999999865332 14578999999999999999999999 999999999999999999
Q ss_pred CeEEeccccceecCCCCC--CccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchhh
Q 038671 579 EAHVSDFGTAKFLKPDSS--NWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNLE 655 (707)
Q Consensus 579 ~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~ 655 (707)
.+||+|||++........ ......+++.|+|||.+.+..++.++||||||+++|+|++ |+.||..... .
T Consensus 176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--------~ 247 (322)
T 1p4o_A 176 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--------E 247 (322)
T ss_dssp CEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH--------H
T ss_pred eEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH--------H
Confidence 999999999976543321 1223456889999999998889999999999999999999 8999864221 1
Q ss_pred hhhhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 656 IALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
...........+... ...+..+.+++.+||+.||++|||+.++++.|+
T Consensus 248 ~~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~ 295 (322)
T 1p4o_A 248 QVLRFVMEGGLLDKP---DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 295 (322)
T ss_dssp HHHHHHHTTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHG
T ss_pred HHHHHHHcCCcCCCC---CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 222222222222111 123345889999999999999999999999875
No 131
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=9.8e-40 Score=367.56 Aligned_cols=206 Identities=27% Similarity=0.272 Sum_probs=155.0
Q ss_pred CCCcEEEcCCCccCCC--CchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCc-cccCCCCcccE
Q 038671 146 PKLGTLDFSSNNITGS--MPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLS-LELGSLTQLER 222 (707)
Q Consensus 146 ~~L~~L~L~~n~i~~~--~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~ 222 (707)
++|++|++++|.+++. .+..+..+++|+.|++++|.++ ..|..+..+++|++|++++|.+.+..+ ..+..+++|++
T Consensus 350 ~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 428 (606)
T 3vq2_A 350 PSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLY 428 (606)
T ss_dssp TTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEE-EECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCE
T ss_pred CCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccc-cchhhccCCCCCCeeECCCCccCCccChhhhhccccCCE
Confidence 3444444444444433 1455556666666666666665 344667777777777777777776655 56778888888
Q ss_pred EEccCCccCCCCCccccCcccCceEeeecccccc-cCchhhhhcccCCeeeecCccCCCCCCcccccccccceEeccccc
Q 038671 223 LDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIK-KIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNN 301 (707)
Q Consensus 223 L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~ 301 (707)
|++++|.+++..|..+.++++|++|++++|.+.+ ..+..+..+++|+.|++++|.+++..|..+..+++|+.|++++|+
T Consensus 429 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 508 (606)
T 3vq2_A 429 LDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNN 508 (606)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCc
Confidence 8888888887778888888888888888888876 367778888889999999998888888888888999999999999
Q ss_pred cCCchhHhhccCCCceeEeeccCcccccCCCccccc-cCchhhcccCcCcCC
Q 038671 302 LSGFIPSCFEELHGLSYIDISYNELHGSIPNSTAFR-DAPMEALQGNKGLCG 352 (707)
Q Consensus 302 i~~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~~-~~~~~~~~~~~~~c~ 352 (707)
+++..|..+..+++|+.|++++|+++..++....+. ......+.+|+..|.
T Consensus 509 l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~ 560 (606)
T 3vq2_A 509 LLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACI 560 (606)
T ss_dssp CSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCS
T ss_pred CCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccC
Confidence 988888888888999999999999886665544443 366677888888773
No 132
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.7e-40 Score=356.21 Aligned_cols=251 Identities=26% Similarity=0.445 Sum_probs=201.3
Q ss_pred hcCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVY 514 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 514 (707)
.++|++.+.||+|+||.||+|..+++..||||++..... ..+++.+|++++++++||||+++++++.+ +..++||
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~ 257 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 257 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC----CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEe
Confidence 467889999999999999999888888899999875432 24678999999999999999999999876 6789999
Q ss_pred eeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCC
Q 038671 515 EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPD 594 (707)
Q Consensus 515 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 594 (707)
||+++|+|.+++... ....+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 258 e~~~~gsL~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 333 (452)
T 1fmk_A 258 EYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDN 333 (452)
T ss_dssp CCCTTCBHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC-----
T ss_pred hhhcCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCC
Confidence 999999999999642 234589999999999999999999999 9999999999999999999999999999876533
Q ss_pred CC-CccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchhhhhhhhhc-CCCCCCCCc
Q 038671 595 SS-NWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNLEIALNEML-DPRLPTPSH 671 (707)
Q Consensus 595 ~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 671 (707)
.. ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... ......+. ..+++.+.
T Consensus 334 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~--------~~~~~~i~~~~~~~~~~- 404 (452)
T 1fmk_A 334 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--------REVLDQVERGYRMPCPP- 404 (452)
T ss_dssp ---------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--------HHHHHHHHTTCCCCCCT-
T ss_pred ceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCCCCCCC-
Confidence 21 1223456788999999998899999999999999999999 9999864321 11111111 12233222
Q ss_pred chHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 672 NVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 672 ~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
..+..+.+++.+||+.||++|||++++++.|+
T Consensus 405 ---~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~ 436 (452)
T 1fmk_A 405 ---ECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436 (452)
T ss_dssp ---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---CCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 23456889999999999999999999999875
No 133
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.2e-40 Score=345.73 Aligned_cols=259 Identities=25% Similarity=0.396 Sum_probs=208.1
Q ss_pred HHhcCCCCCceeeecCCeeEEEEEcC-CC-----cEEEEEecCCCCCchhhhHHHHHHHHHHHhcC-CCCceeeeeeeee
Q 038671 433 RVTNDFDDEHCIGKGGQGSVYKAELP-SG-----EIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGFCS 505 (707)
Q Consensus 433 ~~~~~~~~~~~lg~G~~g~vy~~~~~-~~-----~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~ 505 (707)
...++|++.+.||+|+||.||+|... ++ ..||+|++..... ....+.+.+|+++++++ +||||+++++++.
T Consensus 43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 120 (333)
T 2i1m_A 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH--ADEKEALMSELKIMSHLGQHENIVNLLGACT 120 (333)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCC--HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccC--hHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 34578999999999999999999643 23 4799999876432 23457789999999999 8999999999999
Q ss_pred cCCceeEEEeeeccCcHHHHHhcccc-----------cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeee
Q 038671 506 HARHSFIVYEYLEMGSLAMILSNDAA-----------AKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLL 574 (707)
Q Consensus 506 ~~~~~~lv~e~~~~~~L~~~l~~~~~-----------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~ 574 (707)
..+..++||||+++|+|.+++..... ...+++..++.++.||+.||+|||+. ||+||||||+||++
T Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~ 197 (333)
T 2i1m_A 121 HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLL 197 (333)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEE
T ss_pred cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEE
Confidence 99999999999999999999865321 24579999999999999999999999 99999999999999
Q ss_pred cCCCCeEEeccccceecCCCCCC--ccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccc
Q 038671 575 DLENEAHVSDFGTAKFLKPDSSN--WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSS 651 (707)
Q Consensus 575 ~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~ 651 (707)
+.++.+||+|||++......... .....+++.|+|||.+.+..++.++||||||+++|+|+| |..||..... .
T Consensus 198 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~----~ 273 (333)
T 2i1m_A 198 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV----N 273 (333)
T ss_dssp EGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCS----S
T ss_pred CCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccch----h
Confidence 99999999999999866443322 233457889999999998889999999999999999999 9999864321 1
Q ss_pred chhhhhhhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 652 SNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
...............+. ..+..+.+++.+||+.||.+|||+.++++.|+
T Consensus 274 ~~~~~~~~~~~~~~~~~------~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 322 (333)
T 2i1m_A 274 SKFYKLVKDGYQMAQPA------FAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 322 (333)
T ss_dssp HHHHHHHHHTCCCCCCT------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCCC------CCCHHHHHHHHHHhccChhhCcCHHHHHHHHH
Confidence 11222222222211111 12345889999999999999999999999875
No 134
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.1e-40 Score=338.46 Aligned_cols=254 Identities=25% Similarity=0.414 Sum_probs=208.6
Q ss_pred HhcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeE
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFI 512 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 512 (707)
..++|++.+.||+|+||.||+|.. .+++.||+|++.... ...+.+.+|++++++++||||+++++++.+++..++
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 86 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS----THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH----HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEE
Confidence 456799999999999999999965 458899999986532 245678899999999999999999999999999999
Q ss_pred EEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecC
Q 038671 513 VYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLK 592 (707)
Q Consensus 513 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~ 592 (707)
||||+++++|.+++.... ...+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||.+....
T Consensus 87 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 162 (288)
T 3kfa_A 87 ITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT 162 (288)
T ss_dssp EEECCTTEEHHHHHHHCC-TTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSC
T ss_pred EEEcCCCCcHHHHHHhcc-cCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceecc
Confidence 999999999999996533 35589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCC-CccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchhhhhhhhhcCCCCCCCC
Q 038671 593 PDSS-NWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNLEIALNEMLDPRLPTPS 670 (707)
Q Consensus 593 ~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (707)
.... ......+++.|+|||.+.+..++.++||||||+++|+|++ |..||..... ............. ..+.
T Consensus 163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~-----~~~~~~~~~~~~~--~~~~ 235 (288)
T 3kfa_A 163 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDYRM--ERPE 235 (288)
T ss_dssp SSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG-----GGHHHHHHTTCCC--CCCT
T ss_pred CCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHhccCCC--CCCC
Confidence 4332 2233456788999999998899999999999999999999 9999864321 1111222221111 1111
Q ss_pred cchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 671 HNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 671 ~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
..+..+.+++.+||+.||++||+++++++.|+
T Consensus 236 ----~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~ 267 (288)
T 3kfa_A 236 ----GCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267 (288)
T ss_dssp ----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ----CCCHHHHHHHHHHhCCChhhCcCHHHHHHHHH
Confidence 22355899999999999999999999999874
No 135
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=3.2e-40 Score=359.41 Aligned_cols=253 Identities=25% Similarity=0.422 Sum_probs=207.5
Q ss_pred hcCCCCCceeeecCCeeEEEEEcC-CCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIV 513 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 513 (707)
..+|++.+.||+|+||.||+|..+ +++.||||++..... ..+++.+|++++++++||||+++++++...+..++|
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 294 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 294 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc----chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEE
Confidence 356888999999999999999665 488999999875422 356789999999999999999999999999999999
Q ss_pred EeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCC
Q 038671 514 YEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKP 593 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~ 593 (707)
|||+.+|+|.+++.... ...+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 295 ~E~~~~g~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 370 (495)
T 1opk_A 295 TEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTG 370 (495)
T ss_dssp EECCTTCBHHHHHHHSC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTT
T ss_pred EEccCCCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccC
Confidence 99999999999997533 34589999999999999999999999 999999999999999999999999999987653
Q ss_pred CCC-CccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchhhhhhhhhcCCCCCCCCc
Q 038671 594 DSS-NWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSH 671 (707)
Q Consensus 594 ~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (707)
... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... .......... .++..+.
T Consensus 371 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~-----~~~~~~~~~~--~~~~~~~- 442 (495)
T 1opk_A 371 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKD--YRMERPE- 442 (495)
T ss_dssp CCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG-----GGHHHHHHTT--CCCCCCT-
T ss_pred CceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHcC--CCCCCCC-
Confidence 321 1223345778999999998889999999999999999999 9999864322 1111112211 1222222
Q ss_pred chHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 672 NVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 672 ~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
..+.++.+++.+||+.||++|||+.++++.|+
T Consensus 443 ---~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~ 474 (495)
T 1opk_A 443 ---GCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 474 (495)
T ss_dssp ---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---CCCHHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 23345889999999999999999999999885
No 136
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.3e-41 Score=348.11 Aligned_cols=257 Identities=23% Similarity=0.372 Sum_probs=187.9
Q ss_pred hcCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhc--CCCCceeeeeeeeecCC----
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTG--IRHRNIVKFYGFCSHAR---- 508 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~~---- 508 (707)
.++|++.+.||+|+||.||+|+.. |+.||||++... ....+.+|.+++.. ++||||+++++++...+
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 74 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 74 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T------THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc------chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccc
Confidence 468999999999999999999774 889999998642 23456778888877 78999999999998766
Q ss_pred ceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHH--------hCCCCCeEecCCCCCCeeecCCCCe
Q 038671 509 HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMH--------NDCFPPIVHRDISSKNVLLDLENEA 580 (707)
Q Consensus 509 ~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~~~~ivH~dlk~~Nil~~~~~~~ 580 (707)
..++||||+++|+|.+++... .+++..++.++.|++.||+||| +. +|+||||||+||+++.++.+
T Consensus 75 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~ 147 (303)
T 3gxj_A 75 QLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTC 147 (303)
T ss_dssp EEEEEEECCTTCCHHHHHHHC----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC
T ss_pred eeEEEEeccCCCCHHHHHhcc----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCE
Confidence 789999999999999999542 4788899999999999999999 77 99999999999999999999
Q ss_pred EEeccccceecCCCCCC----ccccccccCCCCccccccC------CCCccchhHHHHHHHHHHHhC----------CCC
Q 038671 581 HVSDFGTAKFLKPDSSN----WAELAGTYGYVAPELAYTM------KVTEKCDVYSFGVLALEVIKG----------KHP 640 (707)
Q Consensus 581 kl~Dfg~~~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~slG~~l~el~tg----------~~p 640 (707)
||+|||++......... .....||+.|+|||.+.+. .++.++||||||+++|||++| +.|
T Consensus 148 kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p 227 (303)
T 3gxj_A 148 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 227 (303)
T ss_dssp -BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCT
T ss_pred EEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecc
Confidence 99999999766544322 2334799999999998776 345689999999999999999 566
Q ss_pred CCcccccccc-cchhhhhhhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 641 RDFISSISSS-SSNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 641 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
|......... .............+..+... .....+..+.+++.+||+.||++|||++++++.|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~ 293 (303)
T 3gxj_A 228 YYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW-QSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 293 (303)
T ss_dssp TTTTCC-CCCCC-CHHHHTTSCCCCCCCGGG-GSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHH
T ss_pred ccccCCCCccHHHHHHHHHHhhcCCCccccc-cchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHH
Confidence 5432211111 11112222222233332211 12255677999999999999999999999999885
No 137
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1e-39 Score=329.58 Aligned_cols=251 Identities=23% Similarity=0.418 Sum_probs=204.8
Q ss_pred hcCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVY 514 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 514 (707)
.++|++.+.||+|+||.||+|...+++.||+|++..... ..+.+.+|++++++++||||+++++++.. +..++||
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~ 86 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 86 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc----cHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEE
Confidence 467899999999999999999888888999999875432 34678899999999999999999999864 5689999
Q ss_pred eeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCC
Q 038671 515 EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPD 594 (707)
Q Consensus 515 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 594 (707)
||+++++|.+++.... ...+++..++.++.|++.||+|||+. |++||||||+||+++.++.+||+|||.+......
T Consensus 87 e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T 1qpc_A 87 EYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 162 (279)
T ss_dssp ECCTTCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSS
T ss_pred ecCCCCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCc
Confidence 9999999999986432 23589999999999999999999999 9999999999999999999999999999876543
Q ss_pred CC-CccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchhhhhhhhhcCC-CCCCCCc
Q 038671 595 SS-NWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNLEIALNEMLDP-RLPTPSH 671 (707)
Q Consensus 595 ~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 671 (707)
.. ......+++.|+|||.+.+..++.++||||||+++|+|++ |+.||..... ......+... ....+.
T Consensus 163 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~- 233 (279)
T 1qpc_A 163 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--------PEVIQNLERGYRMVRPD- 233 (279)
T ss_dssp CEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH--------HHHHHHHHTTCCCCCCT-
T ss_pred ccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH--------HHHHHHHhcccCCCCcc-
Confidence 21 1233456788999999988889999999999999999999 9999864221 1111111111 111111
Q ss_pred chHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 672 NVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 672 ~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
..+.++.+++.+||+.||++|||++++++.|+
T Consensus 234 ---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 265 (279)
T 1qpc_A 234 ---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265 (279)
T ss_dssp ---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---cccHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 23356899999999999999999999999875
No 138
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.9e-40 Score=341.95 Aligned_cols=252 Identities=23% Similarity=0.356 Sum_probs=197.8
Q ss_pred hcCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCC--CceeeeeeeeecCCceeE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH--RNIVKFYGFCSHARHSFI 512 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~l 512 (707)
.++|++.+.||+|+||.||++...+++.||+|++..... .....+.+.+|+.++.+++| |||+++++++..++..++
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 86 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 86 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeecccc-chHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence 457999999999999999999888899999999875433 23345778999999999976 999999999999999999
Q ss_pred EEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecC
Q 038671 513 VYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLK 592 (707)
Q Consensus 513 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~ 592 (707)
||| +.+++|.+++... +.+++..++.++.||+.||+|||+. ||+||||||+||+++ ++.+||+|||++....
T Consensus 87 v~e-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~ 158 (343)
T 3dbq_A 87 VME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 158 (343)
T ss_dssp EEC-CCSEEHHHHHHHS---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred EEe-CCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccC
Confidence 999 5678999999653 4589999999999999999999999 999999999999997 6889999999998765
Q ss_pred CCCC--CccccccccCCCCcccccc-----------CCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhh
Q 038671 593 PDSS--NWAELAGTYGYVAPELAYT-----------MKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALN 659 (707)
Q Consensus 593 ~~~~--~~~~~~g~~~y~aPE~~~~-----------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 659 (707)
.... ......||+.|+|||++.+ ..++.++||||||+++|+|++|+.||..... ......
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-------~~~~~~ 231 (343)
T 3dbq_A 159 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-------QISKLH 231 (343)
T ss_dssp -----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS-------HHHHHH
T ss_pred cccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh-------HHHHHH
Confidence 4432 2235679999999999865 6688999999999999999999999963211 111222
Q ss_pred hhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 660 EMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
...++........ ..+.++.+++.+||+.||++|||+.|+++.
T Consensus 232 ~~~~~~~~~~~~~--~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 232 AIIDPNHEIEFPD--IPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp HHHCTTSCCCCCC--CSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHhcCCcccCCcc--cCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 2222222111000 112358899999999999999999999864
No 139
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=2.1e-39 Score=331.42 Aligned_cols=250 Identities=26% Similarity=0.429 Sum_probs=208.1
Q ss_pred hcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIV 513 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 513 (707)
.+.|++.+.||+|+||.||+|. ..+++.||+|++...... ...+.+.+|+.++++++||||+++++++...+..++|
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 98 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE--DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWII 98 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCS--TTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccH--HHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEE
Confidence 4569999999999999999995 567999999998754322 2457789999999999999999999999999999999
Q ss_pred EeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCC
Q 038671 514 YEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKP 593 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~ 593 (707)
|||+++++|.+++.. ..+++..++.++.|++.||+|||+. |++||||||+||+++.++.+||+|||.+.....
T Consensus 99 ~e~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 171 (303)
T 3a7i_A 99 MEYLGGGSALDLLEP----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD 171 (303)
T ss_dssp EECCTTEEHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBT
T ss_pred EEeCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCc
Confidence 999999999999853 3589999999999999999999999 999999999999999999999999999988765
Q ss_pred CCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCcch
Q 038671 594 DSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHNV 673 (707)
Q Consensus 594 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (707)
.........|++.|+|||.+.+..++.++||||||+++|+|++|+.||...... ...........+..+.
T Consensus 172 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~----- 241 (303)
T 3a7i_A 172 TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM-----KVLFLIPKNNPPTLEG----- 241 (303)
T ss_dssp TBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHHHHHHSCCCCCCS-----
T ss_pred cccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH-----HHHHHhhcCCCCCCcc-----
Confidence 544445567999999999999988999999999999999999999998643211 1111111111111111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 674 QDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 674 ~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
..+..+.+++.+||+.||++|||+.++++.
T Consensus 242 -~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 242 -NYSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp -SCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred -ccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 223458899999999999999999999864
No 140
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=7.2e-41 Score=351.23 Aligned_cols=261 Identities=18% Similarity=0.251 Sum_probs=198.8
Q ss_pred hcCCCCCceeeecCCeeEEEEEcCC------CcEEEEEecCCCCCchhhh--------HHHHHHHHHHHhcCCCCceeee
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAELPS------GEIVAVKKFHSPLPSEMAS--------QQEFLNEVKTLTGIRHRNIVKF 500 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~~~------~~~vavK~~~~~~~~~~~~--------~~~~~~e~~~l~~l~h~niv~~ 500 (707)
.++|++.+.||+|+||.||+|..+. ++.||+|++.........+ ...+..|+..+..++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4589999999999999999997654 4789999986543211111 1124456667788899999999
Q ss_pred eeeeecC----CceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeec-
Q 038671 501 YGFCSHA----RHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLD- 575 (707)
Q Consensus 501 ~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~- 575 (707)
++++... ...++||||+ +++|.+++... ...+++..++.++.||+.||+|||+. ||+||||||+||+++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~ 187 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN--AKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNY 187 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEES
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEec
Confidence 9998764 4589999999 99999999643 35699999999999999999999999 999999999999999
Q ss_pred -CCCCeEEeccccceecCCCCC-------CccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccc
Q 038671 576 -LENEAHVSDFGTAKFLKPDSS-------NWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSI 647 (707)
Q Consensus 576 -~~~~~kl~Dfg~~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~ 647 (707)
.++.+||+|||+++.+..... ......||+.|+|||.+.+..++.++||||||+++|||+||+.||......
T Consensus 188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~ 267 (364)
T 3op5_A 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD 267 (364)
T ss_dssp SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC
Confidence 889999999999987653321 123446999999999999999999999999999999999999999742211
Q ss_pred ccccc----hhhhhhhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 648 SSSSS----NLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 648 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
..... ..........++.++. ...+.++.+++..||+.||++||+++++++.|+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~ 325 (364)
T 3op5_A 268 PKYVRDSKIRYRENIASLMDKCFPA-----ANAPGEIAKYMETVKLLDYTEKPLYENLRDILL 325 (364)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHSCT-----TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhHHHHHHHhccc-----ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 00000 0001111111111111 112346899999999999999999999998874
No 141
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=5e-40 Score=336.21 Aligned_cols=251 Identities=23% Similarity=0.330 Sum_probs=203.0
Q ss_pred HhcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeE
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFI 512 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 512 (707)
+.++|++.+.||+|+||.||+++. .+|+.||+|++..... ...+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA---FRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYL 83 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC---------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc---cchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEE
Confidence 456799999999999999999965 5799999999875422 234568899999999999999999999999999999
Q ss_pred EEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeee---cCCCCeEEeccccce
Q 038671 513 VYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLL---DLENEAHVSDFGTAK 589 (707)
Q Consensus 513 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~---~~~~~~kl~Dfg~~~ 589 (707)
||||+++++|.+++... +.+++..++.++.|++.||+|||+. |++||||||+||++ +.++.+||+|||++.
T Consensus 84 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~ 157 (304)
T 2jam_A 84 VMQLVSGGELFDRILER---GVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSK 157 (304)
T ss_dssp EECCCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTC
T ss_pred EEEcCCCccHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcce
Confidence 99999999999998543 3589999999999999999999999 99999999999999 778899999999997
Q ss_pred ecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCC
Q 038671 590 FLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTP 669 (707)
Q Consensus 590 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (707)
..... ......|++.|+|||.+.+..++.++||||||+++|+|++|+.||..... ......+.......+
T Consensus 158 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~~~~~~i~~~~~~~~ 227 (304)
T 2jam_A 158 MEQNG--IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE--------SKLFEKIKEGYYEFE 227 (304)
T ss_dssp CCCCB--TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH--------HHHHHHHHHCCCCCC
T ss_pred ecCCC--ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHcCCCCCC
Confidence 54322 23445789999999999998999999999999999999999999863221 111122222221111
Q ss_pred CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 670 SHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 670 ~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
.......+.++.+++.+||+.||++||+++|+++
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 228 SPFWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp TTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1122234456899999999999999999999986
No 142
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=2.8e-40 Score=341.19 Aligned_cols=252 Identities=25% Similarity=0.408 Sum_probs=198.4
Q ss_pred cCCCCCceeeecCCeeEEEEEc-CCCcE----EEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCce
Q 038671 436 NDFDDEHCIGKGGQGSVYKAEL-PSGEI----VAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHS 510 (707)
Q Consensus 436 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~----vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 510 (707)
++|++.+.||+|+||.||+|.. .+++. ||+|++...... .....+.+|+..+++++||||+++++++. ++..
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 89 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR--QSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSL 89 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSC--SCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccH--HHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCcc
Confidence 5789999999999999999964 44543 888887543221 12345678999999999999999999986 4668
Q ss_pred eEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEecccccee
Q 038671 511 FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKF 590 (707)
Q Consensus 511 ~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~ 590 (707)
++||||+.+|+|.+++... ...+++..++.++.||+.||+|||+. ||+||||||+||+++.++.+||+|||+++.
T Consensus 90 ~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 164 (325)
T 3kex_A 90 QLVTQYLPLGSLLDHVRQH--RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADL 164 (325)
T ss_dssp EEEEECCTTCBSHHHHHSS--GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGG
T ss_pred EEEEEeCCCCCHHHHHHHc--cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccc
Confidence 8999999999999999654 24689999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC--CccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchhhhhhhhhcCCCCC
Q 038671 591 LKPDSS--NWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNLEIALNEMLDPRLP 667 (707)
Q Consensus 591 ~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (707)
...... ......+++.|+|||.+.+..++.++||||||+++|+|++ |+.||..... ............ ..
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-----~~~~~~~~~~~~--~~ 237 (325)
T 3kex_A 165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL-----AEVPDLLEKGER--LA 237 (325)
T ss_dssp SCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCT-----THHHHHHHTTCB--CC
T ss_pred cCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCH-----HHHHHHHHcCCC--CC
Confidence 654432 2344567889999999998899999999999999999999 9999974321 111122222111 11
Q ss_pred CCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 668 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
.+.. .+.++.+++.+||+.||.+||++.++++.|+
T Consensus 238 ~~~~----~~~~~~~li~~~l~~dp~~Rps~~el~~~l~ 272 (325)
T 3kex_A 238 QPQI----CTIDVYMVMVKCWMIDENIRPTFKELANEFT 272 (325)
T ss_dssp CCTT----BCTTTTHHHHHHTCSCTTTSCCHHHHHHHHH
T ss_pred CCCc----CcHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111 2234788999999999999999999999874
No 143
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=8.7e-40 Score=330.90 Aligned_cols=253 Identities=25% Similarity=0.383 Sum_probs=197.5
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIV 513 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 513 (707)
.++|++.+.||+|+||.||+|.. .+++.+|+|++..... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 98 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS--QVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIV 98 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC--CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeecccc--chhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEE
Confidence 35799999999999999999954 5789999999865422 22456789999999999999999999999999999999
Q ss_pred EeeeccCcHHHHHhccc-ccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeee---cCCCCeEEeccccce
Q 038671 514 YEYLEMGSLAMILSNDA-AAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLL---DLENEAHVSDFGTAK 589 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~---~~~~~~kl~Dfg~~~ 589 (707)
|||+++++|.+++.... ....+++..++.++.|++.||+|||+. ||+||||||+||++ +.++.+||+|||++.
T Consensus 99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~ 175 (285)
T 3is5_A 99 METCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175 (285)
T ss_dssp ECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCC
T ss_pred EEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecce
Confidence 99999999999885432 235689999999999999999999999 99999999999999 456789999999997
Q ss_pred ecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCC
Q 038671 590 FLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTP 669 (707)
Q Consensus 590 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (707)
...... ......|++.|+|||.+. ..++.++||||||+++|+|++|+.||..... ...... .....+.....
T Consensus 176 ~~~~~~-~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~-----~~~~~~-~~~~~~~~~~~ 247 (285)
T 3is5_A 176 LFKSDE-HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSL-----EEVQQK-ATYKEPNYAVE 247 (285)
T ss_dssp C-----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHH-HHHCCCCCCC-
T ss_pred ecCCcc-cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCH-----HHHHhh-hccCCcccccc
Confidence 655432 234567899999999876 4689999999999999999999999964221 111111 11111111111
Q ss_pred CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 670 SHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 670 ~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
. ...+.++.+++.+||+.||++|||+.|+++
T Consensus 248 ~---~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 248 C---RPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp ----CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred c---CcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 112345889999999999999999999986
No 144
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=5.8e-40 Score=368.88 Aligned_cols=252 Identities=20% Similarity=0.285 Sum_probs=210.2
Q ss_pred HhcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcC-CCCceeeeeeeeecCCcee
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGFCSHARHSF 511 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 511 (707)
..++|++.+.||+|+||.||+|+. .+++.||||++...........+.+..|..++..+ +||+|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 457899999999999999999954 56889999998643222223446678899999988 6999999999999999999
Q ss_pred EEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceec
Q 038671 512 IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFL 591 (707)
Q Consensus 512 lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~ 591 (707)
+||||+.||+|.+++... ..+++..++.++.||+.||+|||+. ||+||||||+|||++.++.+||+|||+++..
T Consensus 419 lV~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~ 492 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 492 (674)
T ss_dssp EEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEEC
T ss_pred EEEeCcCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeecc
Confidence 999999999999999653 3589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCc
Q 038671 592 KPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSH 671 (707)
Q Consensus 592 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (707)
..........+||+.|+|||++.+..++.++||||||+++|||++|+.||... ........+.......+..
T Consensus 493 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~--------~~~~~~~~i~~~~~~~p~~ 564 (674)
T 3pfq_A 493 IWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE--------DEDELFQSIMEHNVAYPKS 564 (674)
T ss_dssp CCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHSSCCCCCTT
T ss_pred ccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCC--------CHHHHHHHHHhCCCCCCcc
Confidence 55555566778999999999999999999999999999999999999999632 2223334444444433322
Q ss_pred chHHHHHHHHHHHHhccCCCCCCCCCH-----HHHHH
Q 038671 672 NVQDKLISIMEVAISCLDESPESRPTI-----QKVSQ 703 (707)
Q Consensus 672 ~~~~~~~~l~~li~~cl~~~P~~Rps~-----~~l~~ 703 (707)
.+.++.+++.+||+.||++||++ +|+++
T Consensus 565 ----~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 565 ----MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp ----SCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred ----CCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 33458899999999999999997 66654
No 145
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=6.9e-40 Score=345.95 Aligned_cols=251 Identities=23% Similarity=0.354 Sum_probs=198.6
Q ss_pred cCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCC--CCceeeeeeeeecCCceeEE
Q 038671 436 NDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR--HRNIVKFYGFCSHARHSFIV 513 (707)
Q Consensus 436 ~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~lv 513 (707)
++|++.+.||+|+||.||+|...+++.||||++..... .....+.+.+|++++++++ ||||+++++++..++..++|
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 134 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 134 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccc-cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence 45999999999999999999888899999999875433 2345677999999999996 59999999999999999999
Q ss_pred EeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCC
Q 038671 514 YEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKP 593 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~ 593 (707)
|| +.+++|.+++... ..+++..++.++.||+.||+|||+. +|+||||||+||+++ ++.+||+|||+++....
T Consensus 135 ~E-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~ 206 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 206 (390)
T ss_dssp EE-CCSEEHHHHHHHC---SSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC--
T ss_pred Ee-cCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccC
Confidence 99 6788999999653 3588999999999999999999999 999999999999996 68999999999987654
Q ss_pred CCC--CccccccccCCCCcccccc-----------CCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhh
Q 038671 594 DSS--NWAELAGTYGYVAPELAYT-----------MKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNE 660 (707)
Q Consensus 594 ~~~--~~~~~~g~~~y~aPE~~~~-----------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 660 (707)
... .....+||+.|+|||++.+ ..++.++||||||+++|||++|+.||..... .......
T Consensus 207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-------~~~~~~~ 279 (390)
T 2zmd_A 207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-------QISKLHA 279 (390)
T ss_dssp -------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC-------HHHHHHH
T ss_pred CCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH-------HHHHHHH
Confidence 332 2344679999999999865 3688899999999999999999999963211 1112222
Q ss_pred hcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 661 MLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
+.++........ ..+.++.+++.+||+.||++||++.|+++.
T Consensus 280 ~~~~~~~~~~~~--~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 280 IIDPNHEIEFPD--IPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp HHCTTSCCCCCC--CSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HhCccccCCCCc--cchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 333222111100 113458899999999999999999999863
No 146
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-39 Score=329.45 Aligned_cols=252 Identities=24% Similarity=0.351 Sum_probs=203.2
Q ss_pred cCCCCCc-eeeecCCeeEEEEEc---CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCcee
Q 038671 436 NDFDDEH-CIGKGGQGSVYKAEL---PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSF 511 (707)
Q Consensus 436 ~~~~~~~-~lg~G~~g~vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 511 (707)
++|.+.+ .||+|+||.||+|.. .+++.||+|++.... .....+.+.+|++++++++||||+++++++ ..+..+
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~ 85 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALM 85 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc--chhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcE
Confidence 4566665 899999999999964 367889999997642 334567799999999999999999999999 456789
Q ss_pred EEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceec
Q 038671 512 IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFL 591 (707)
Q Consensus 512 lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~ 591 (707)
+||||+++++|.+++... ...+++..++.++.|++.||+|||+. |++||||||+||+++.++.+||+|||++...
T Consensus 86 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~ 160 (287)
T 1u59_A 86 LVMEMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKAL 160 (287)
T ss_dssp EEEECCTTEEHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEeCCCCCHHHHHHhC--CccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeee
Confidence 999999999999999643 34589999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCCC---ccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchhhhhhhhhcCCCCC
Q 038671 592 KPDSSN---WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNLEIALNEMLDPRLP 667 (707)
Q Consensus 592 ~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (707)
...... .....+++.|+|||.+.+..++.++||||||+++|+|++ |+.||..... ............+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-----~~~~~~i~~~~~~~~- 234 (287)
T 1u59_A 161 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG-----PEVMAFIEQGKRMEC- 234 (287)
T ss_dssp TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT-----HHHHHHHHTTCCCCC-
T ss_pred ccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH-----HHHHHHHhcCCcCCC-
Confidence 544322 223356789999999988889999999999999999998 9999964322 111111211111111
Q ss_pred CCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 668 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
+. ..+.++.+++.+||+.||++||++.++++.|+
T Consensus 235 -~~----~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 268 (287)
T 1u59_A 235 -PP----ECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 268 (287)
T ss_dssp -CT----TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred -CC----CcCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11 23456899999999999999999999999874
No 147
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=6.8e-40 Score=358.69 Aligned_cols=254 Identities=24% Similarity=0.351 Sum_probs=204.6
Q ss_pred HhcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCch----------hhhHHHHHHHHHHHhcCCCCceeeeee
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSE----------MASQQEFLNEVKTLTGIRHRNIVKFYG 502 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~----------~~~~~~~~~e~~~l~~l~h~niv~~~~ 502 (707)
+.++|++.+.||+|+||+||+|.. .+++.||+|++....... ....+.+.+|+.++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 467899999999999999999964 568999999987543221 123567899999999999999999999
Q ss_pred eeecCCceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCC---C
Q 038671 503 FCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLEN---E 579 (707)
Q Consensus 503 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~---~ 579 (707)
++.+++..++||||+.+|+|.+++... ..+++..++.++.||+.||+|||+. ||+||||||+||+++.++ .
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ 187 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINR---HKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLN 187 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSS
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCcc
Confidence 999999999999999999999988643 4589999999999999999999999 999999999999998776 6
Q ss_pred eEEeccccceecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhh
Q 038671 580 AHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALN 659 (707)
Q Consensus 580 ~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 659 (707)
+||+|||++...... .......||+.|+|||++.+ .++.++||||+|+++|+|++|+.||.... ......
T Consensus 188 ~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~~ 257 (504)
T 3q5i_A 188 IKIVDFGLSSFFSKD-YKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQN--------DQDIIK 257 (504)
T ss_dssp EEECCCTTCEECCTT-SCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHH
T ss_pred EEEEECCCCEEcCCC-CccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCC--------HHHHHH
Confidence 999999999876543 23445679999999999874 59999999999999999999999996422 122233
Q ss_pred hhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 660 EMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
.+.......+.......+.++.+++.+||+.||.+|||++|+++
T Consensus 258 ~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 258 KVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp HHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 33333332222222234566899999999999999999999986
No 148
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=3.1e-39 Score=329.04 Aligned_cols=252 Identities=25% Similarity=0.362 Sum_probs=199.6
Q ss_pred CCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEEEe
Q 038671 437 DFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYE 515 (707)
Q Consensus 437 ~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 515 (707)
+|.....||+|+||.||+|. ..+++.||+|++..... ...+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 99 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS---RYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFME 99 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC------HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCch---HHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEE
Confidence 45556689999999999995 56789999999875422 245678899999999999999999999999999999999
Q ss_pred eeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecC-CCCeEEeccccceecCCC
Q 038671 516 YLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDL-ENEAHVSDFGTAKFLKPD 594 (707)
Q Consensus 516 ~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~-~~~~kl~Dfg~~~~~~~~ 594 (707)
|+++++|.+++........+++..++.++.|++.||+|||+. |++||||||+||+++. ++.+||+|||.+......
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~ 176 (295)
T 2clq_A 100 QVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI 176 (295)
T ss_dssp CCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-
T ss_pred eCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCC
Confidence 999999999997654444577899999999999999999999 9999999999999987 899999999999876654
Q ss_pred CCCccccccccCCCCccccccCC--CCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCcc
Q 038671 595 SSNWAELAGTYGYVAPELAYTMK--VTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHN 672 (707)
Q Consensus 595 ~~~~~~~~g~~~y~aPE~~~~~~--~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (707)
........|++.|+|||.+.+.. ++.++||||||+++|+|++|+.||...... .............+..+.
T Consensus 177 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~~~~~~~~~~~~~~~---- 249 (295)
T 2clq_A 177 NPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP---QAAMFKVGMFKVHPEIPE---- 249 (295)
T ss_dssp ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSH---HHHHHHHHHHCCCCCCCT----
T ss_pred CCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCch---hHHHHhhccccccccccc----
Confidence 44345567899999999987654 788999999999999999999998632211 001111111111222221
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 673 VQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 673 ~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
..+.++.+++.+||+.||++||++.++++
T Consensus 250 --~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 250 --SMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp --TSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred --cCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 22345889999999999999999999986
No 149
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-39 Score=338.01 Aligned_cols=263 Identities=25% Similarity=0.402 Sum_probs=198.8
Q ss_pred HHHhcCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcC--CCCceeeeeeeeecC--
Q 038671 432 IRVTNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI--RHRNIVKFYGFCSHA-- 507 (707)
Q Consensus 432 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~~~~~~~~~-- 507 (707)
....++|++.+.||+|+||.||+|+.. ++.||||++... .......|.+++... +||||+++++++...
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~ 105 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT------EEASWFRETEIYQTVLMRHENILGFIAADIKGTG 105 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc------ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCC
Confidence 445678999999999999999999875 899999998532 223444555555544 899999999999876
Q ss_pred --CceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCC-----CCCeEecCCCCCCeeecCCCCe
Q 038671 508 --RHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDC-----FPPIVHRDISSKNVLLDLENEA 580 (707)
Q Consensus 508 --~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----~~~ivH~dlk~~Nil~~~~~~~ 580 (707)
...++||||+++|+|.++++. ..+++..++.++.|++.||+|||+.+ .+||+||||||+||+++.++.+
T Consensus 106 ~~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 181 (337)
T 3mdy_A 106 SWTQLYLITDYHENGSLYDYLKS----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTC 181 (337)
T ss_dssp GGCEEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCE
T ss_pred CCCceEEEEeccCCCcHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCE
Confidence 678999999999999999964 25899999999999999999999762 2389999999999999999999
Q ss_pred EEeccccceecCCCCCC----ccccccccCCCCccccccCCCCcc------chhHHHHHHHHHHHhC----------CCC
Q 038671 581 HVSDFGTAKFLKPDSSN----WAELAGTYGYVAPELAYTMKVTEK------CDVYSFGVLALEVIKG----------KHP 640 (707)
Q Consensus 581 kl~Dfg~~~~~~~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~------~Dv~slG~~l~el~tg----------~~p 640 (707)
||+|||++......... .....||+.|+|||.+.+..++.+ +||||||+++|||++| +.|
T Consensus 182 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p 261 (337)
T 3mdy_A 182 CIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLP 261 (337)
T ss_dssp EECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccccccc
Confidence 99999999876543322 124579999999999987766655 9999999999999999 555
Q ss_pred CCcccccccccchhhh-hhhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 641 RDFISSISSSSSNLEI-ALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 641 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
|............... .......+..+.. ......+.++.+++.+||+.||++|||+.++++.|+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 327 (337)
T 3mdy_A 262 YHDLVPSDPSYEDMREIVCIKKLRPSFPNR-WSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLA 327 (337)
T ss_dssp TTTTSCSSCCHHHHHHHHTTSCCCCCCCGG-GGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HhhhcCCCCchhhhHHHHhhhccCcccccc-chhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHH
Confidence 5432221111111111 1111111222111 112356778999999999999999999999999885
No 150
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-39 Score=336.69 Aligned_cols=252 Identities=27% Similarity=0.472 Sum_probs=198.4
Q ss_pred cCCCCCceeeecCCeeEEEEEcCC-----CcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCce
Q 038671 436 NDFDDEHCIGKGGQGSVYKAELPS-----GEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHS 510 (707)
Q Consensus 436 ~~~~~~~~lg~G~~g~vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 510 (707)
.+|++.+.||+|+||.||+|.... +..||+|++.... .......+.+|++++++++||||+++++++...+..
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 121 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPM 121 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCc
Confidence 467778999999999999996432 3469999987543 233456789999999999999999999999999999
Q ss_pred eEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEecccccee
Q 038671 511 FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKF 590 (707)
Q Consensus 511 ~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~ 590 (707)
++||||+++++|.+++... ...+++..++.++.||+.||+|||+. ||+||||||+||+++.++.+||+|||++..
T Consensus 122 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 196 (333)
T 1mqb_A 122 MIITEYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRV 196 (333)
T ss_dssp EEEEECCTTEEHHHHHHHT--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred EEEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchh
Confidence 9999999999999999643 34689999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC---ccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchhhhhhhhhcCC-C
Q 038671 591 LKPDSSN---WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNLEIALNEMLDP-R 665 (707)
Q Consensus 591 ~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~ 665 (707)
....... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... ......+... +
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~--------~~~~~~~~~~~~ 268 (333)
T 1mqb_A 197 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN--------HEVMKAINDGFR 268 (333)
T ss_dssp --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHHHHTTCC
T ss_pred hccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH--------HHHHHHHHCCCc
Confidence 6543221 122345778999999998889999999999999999999 9999863221 1112222221 2
Q ss_pred CCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 666 LPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 666 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
.+.+. ..+.++.+++.+||+.||++||++.++++.|+
T Consensus 269 ~~~~~----~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 305 (333)
T 1mqb_A 269 LPTPM----DCPSAIYQLMMQCWQQERARRPKFADIVSILD 305 (333)
T ss_dssp CCCCT----TCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred CCCcc----cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 22222 23445899999999999999999999999874
No 151
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.3e-40 Score=346.18 Aligned_cols=255 Identities=22% Similarity=0.283 Sum_probs=202.1
Q ss_pred HHHhcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCC-----CCceeeeeeeee
Q 038671 432 IRVTNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR-----HRNIVKFYGFCS 505 (707)
Q Consensus 432 ~~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~~~~~~~ 505 (707)
..+.++|++.+.||+|+||.||+|+. .+++.||||++... ......+..|+.+++.++ ||||+++++++.
T Consensus 31 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~ 106 (360)
T 3llt_A 31 MLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI----KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFM 106 (360)
T ss_dssp CEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEE
T ss_pred eEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc----hhhhhhhHHHHHHHHHhcccCCCCCCeecccceee
Confidence 34568899999999999999999954 67899999998642 234456778999999886 999999999999
Q ss_pred cCCceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecC---------
Q 038671 506 HARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDL--------- 576 (707)
Q Consensus 506 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~--------- 576 (707)
..+..++||||+ +++|.+++.... ...+++..++.++.||+.||+|||+. ||+||||||+||+++.
T Consensus 107 ~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~ 181 (360)
T 3llt_A 107 YYDHMCLIFEPL-GPSLYEIITRNN-YNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLIT 181 (360)
T ss_dssp ETTEEEEEECCC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEE
T ss_pred ECCeeEEEEcCC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccc
Confidence 999999999999 899999997543 23589999999999999999999999 9999999999999975
Q ss_pred ----------------CCCeEEeccccceecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCC
Q 038671 577 ----------------ENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640 (707)
Q Consensus 577 ----------------~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p 640 (707)
++.+||+|||++...... .....||+.|+|||++.+..++.++||||||+++|+|++|+.|
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~p 258 (360)
T 3llt_A 182 VRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY---HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLL 258 (360)
T ss_dssp EECTTTCCEEEEEEESCCCEEECCCTTCEETTSC---CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred hhcccccccccccccCCCCEEEEeccCceecCCC---CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCC
Confidence 789999999999875432 2346789999999999999999999999999999999999999
Q ss_pred CCcccccccccchhhhhhhhhcC-------------------------CCCCCCCcchHH--------------HHHHHH
Q 038671 641 RDFISSISSSSSNLEIALNEMLD-------------------------PRLPTPSHNVQD--------------KLISIM 681 (707)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~--------------~~~~l~ 681 (707)
|....... ....+..... ...+........ ....+.
T Consensus 259 f~~~~~~~-----~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 333 (360)
T 3llt_A 259 FRTHEHME-----HLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFC 333 (360)
T ss_dssp CCCSSHHH-----HHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHH
T ss_pred CCCCcHHH-----HHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHH
Confidence 96422110 0000000000 001111110000 114578
Q ss_pred HHHHhccCCCCCCCCCHHHHHH
Q 038671 682 EVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 682 ~li~~cl~~~P~~Rps~~~l~~ 703 (707)
+++.+||+.||++|||++|+++
T Consensus 334 ~li~~~L~~dP~~Rpta~elL~ 355 (360)
T 3llt_A 334 DFLYSILQIDPTLRPSPAELLK 355 (360)
T ss_dssp HHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHHHhcCChhhCCCHHHHhc
Confidence 9999999999999999999986
No 152
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.4e-40 Score=341.36 Aligned_cols=256 Identities=18% Similarity=0.277 Sum_probs=191.9
Q ss_pred cCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEEE
Q 038671 436 NDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVY 514 (707)
Q Consensus 436 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 514 (707)
++|++.+.||+|+||.||+|+. .+++.||+|++...... .....+.+|++++++++||||+++++++..++..++||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE--GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 79 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC--------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc--ccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEe
Confidence 5789999999999999999965 47899999998653221 11223557999999999999999999999999999999
Q ss_pred eeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCC
Q 038671 515 EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPD 594 (707)
Q Consensus 515 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 594 (707)
||++ ++|.+++... ...+++..++.++.||+.||+|||+. ||+||||||+||+++.++.+||+|||++......
T Consensus 80 e~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 153 (324)
T 3mtl_A 80 EYLD-KDLKQYLDDC--GNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIP 153 (324)
T ss_dssp ECCS-EEHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC---
T ss_pred cccc-cCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCC
Confidence 9998 5888887543 34589999999999999999999999 9999999999999999999999999999876555
Q ss_pred CCCccccccccCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhc-----------
Q 038671 595 SSNWAELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEML----------- 662 (707)
Q Consensus 595 ~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~----------- 662 (707)
........||+.|+|||.+.+ ..++.++||||+|+++|+|++|+.||....... ..........
T Consensus 154 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~----~~~~i~~~~~~~~~~~~~~~~ 229 (324)
T 3mtl_A 154 TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE----QLHFIFRILGTPTEETWPGIL 229 (324)
T ss_dssp ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHHHHCCCCTTTSTTGG
T ss_pred ccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHhCCCChHhchhhh
Confidence 444555678999999999876 568999999999999999999999996432110 0111111000
Q ss_pred ---------CCCCCCC--CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 663 ---------DPRLPTP--SHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 663 ---------~~~~~~~--~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
.+..... ....+..+.++.+++.+||+.||++|||++|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 230 SNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp GCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 0000000 0001122356889999999999999999999986
No 153
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.1e-39 Score=351.61 Aligned_cols=259 Identities=20% Similarity=0.306 Sum_probs=195.5
Q ss_pred hcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecC------
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHA------ 507 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------ 507 (707)
.++|++.+.||+|+||.||+|. ..+|+.||||++..... .....+.+.+|+.+++.++||||+++++++...
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGG-SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECcccc-ChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 5789999999999999999995 56799999999875422 233456788999999999999999999999654
Q ss_pred CceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEecccc
Q 038671 508 RHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGT 587 (707)
Q Consensus 508 ~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~ 587 (707)
...|+||||++++ +.+.+. ..+++..++.++.||+.||+|||+. ||+||||||+||+++.++.+||+|||+
T Consensus 140 ~~~~lv~E~~~~~-l~~~~~-----~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 140 QDVYLVMELMDAN-LCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 210 (464)
T ss_dssp CEEEEEEECCSEE-HHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred CeEEEEEeCCCCC-HHHHHh-----hcCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEe
Confidence 3569999999865 555553 2388999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchh-------------
Q 038671 588 AKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNL------------- 654 (707)
Q Consensus 588 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~------------- 654 (707)
++..... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||...+.........
T Consensus 211 a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~ 289 (464)
T 3ttj_A 211 ARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 289 (464)
T ss_dssp C-----C-CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTT
T ss_pred eeecCCC-cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 9876533 23455689999999999999999999999999999999999999997432211000000
Q ss_pred -hhhhhhhcCCC----------------CCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 655 -EIALNEMLDPR----------------LPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 655 -~~~~~~~~~~~----------------~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
........... .+.........+.++.+++.+||..||++|||++|+++.
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp SCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000001100 011111112235678999999999999999999999863
No 154
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.9e-40 Score=340.78 Aligned_cols=262 Identities=23% Similarity=0.326 Sum_probs=198.3
Q ss_pred HHhcCCCCCceeeecCCeeEEEEEcC-CCcEEEEEecCCCCCchh--hhHHHHHHHHHHHhcCCCCceeeeeeeeecCCc
Q 038671 433 RVTNDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEM--ASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARH 509 (707)
Q Consensus 433 ~~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 509 (707)
...++|++.+.||+|+||.||+|... +|+.||+|++........ ...+.+.+|++++++++||||+++++++.+.+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 44578999999999999999999764 689999999875332211 112467899999999999999999999999999
Q ss_pred eeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccce
Q 038671 510 SFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAK 589 (707)
Q Consensus 510 ~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~ 589 (707)
.++||||+++ +|.+++... ...+++..++.++.|+++||+|||+. ||+||||||+||+++.++.+||+|||++.
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDN--SLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAK 160 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTC--CSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred eEEEEEcCCC-CHHHHHHhc--CcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccce
Confidence 9999999986 888888543 34688999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCCCccccccccCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCC----
Q 038671 590 FLKPDSSNWAELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDP---- 664 (707)
Q Consensus 590 ~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~---- 664 (707)
.............||+.|+|||.+.+. .++.++||||||+++|+|++|.+||....... ...........+
T Consensus 161 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~----~~~~i~~~~~~~~~~~ 236 (346)
T 1ua2_A 161 SFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD----QLTRIFETLGTPTEEQ 236 (346)
T ss_dssp TTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHHHHCCCCTTT
T ss_pred eccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH----HHHHHHHHcCCCChhh
Confidence 776555455567899999999998764 47899999999999999999999986432211 111111111000
Q ss_pred --------------CCCCCC--cchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 665 --------------RLPTPS--HNVQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 665 --------------~~~~~~--~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
..+... ......+.++.+++.+||+.||++|||++|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 237 WPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp SSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000000 0001233568999999999999999999999864
No 155
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=6.5e-40 Score=330.56 Aligned_cols=251 Identities=24% Similarity=0.356 Sum_probs=196.8
Q ss_pred hcCCCCCceeeecCCeeEEEEEcC-CCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIV 513 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 513 (707)
.++|++.+.||+|+||.||+|... +|+.||+|++...........+.+.+|++.++.++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 468999999999999999999654 7999999998643222223356788999999999999999999999999999999
Q ss_pred EeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCC
Q 038671 514 YEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKP 593 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~ 593 (707)
|||+++++|.+++... ..+++..++.++.|++.||+|||+. |++||||||+||+++.++.+||+|||.+.....
T Consensus 90 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 163 (276)
T 2h6d_A 90 MEYVSGGELFDYICKH---GRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163 (276)
T ss_dssp EECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred EeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCC
Confidence 9999999999998643 3589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCccccccccCCCCccccccCCC-CccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCcc
Q 038671 594 DSSNWAELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHN 672 (707)
Q Consensus 594 ~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (707)
.. ......+++.|+|||.+.+..+ +.++||||||+++|+|++|+.||+... .......+.......+..
T Consensus 164 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--------~~~~~~~~~~~~~~~~~~- 233 (276)
T 2h6d_A 164 GE-FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH--------VPTLFKKIRGGVFYIPEY- 233 (276)
T ss_dssp --------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCCCCCCTT-
T ss_pred Cc-ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc--------HHHHHHHhhcCcccCchh-
Confidence 32 2344578999999999987765 689999999999999999999986321 111122222222222221
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 673 VQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 673 ~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
.+.++.+++.+||+.||.+|||+.++++.
T Consensus 234 ---~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 234 ---LNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp ---SCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ---cCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 23458899999999999999999999863
No 156
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=2.3e-40 Score=341.95 Aligned_cols=263 Identities=18% Similarity=0.286 Sum_probs=206.3
Q ss_pred HHHHHHHhcCCCCC-ceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCC-CCceeeeeeee
Q 038671 428 YEEIIRVTNDFDDE-HCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR-HRNIVKFYGFC 504 (707)
Q Consensus 428 ~~~~~~~~~~~~~~-~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~ 504 (707)
++....+.++|.+. +.||+|+||.||+|.. .+++.||+|++...... ......+.+|+.++..++ ||||+++++++
T Consensus 20 ~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~ 98 (327)
T 3lm5_A 20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRG-QDCRAEILHEIAVLELAKSCPRVINLHEVY 98 (327)
T ss_dssp SBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETT-EECHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred HHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcc-hHHHHHHHHHHHHHHhccCCCCEEEEEEEE
Confidence 33445667788887 8899999999999954 57999999998754322 224567889999999995 79999999999
Q ss_pred ecCCceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecC---CCCeE
Q 038671 505 SHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDL---ENEAH 581 (707)
Q Consensus 505 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~---~~~~k 581 (707)
.+.+..++||||+.+++|.+++... ....+++..++.++.|++.||+|||++ ||+||||||+||+++. ++.+|
T Consensus 99 ~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~k 174 (327)
T 3lm5_A 99 ENTSEIILILEYAAGGEIFSLCLPE-LAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIK 174 (327)
T ss_dssp ECSSEEEEEEECCTTEEGGGGGSSC-C-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEE
T ss_pred EeCCeEEEEEEecCCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEE
Confidence 9999999999999999999988543 235689999999999999999999999 9999999999999987 78999
Q ss_pred EeccccceecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhh
Q 038671 582 VSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEM 661 (707)
Q Consensus 582 l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 661 (707)
|+|||++....... ......|++.|+|||.+.+..++.++||||||+++|+|++|+.||..... ......+
T Consensus 175 L~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~~i 245 (327)
T 3lm5_A 175 IVDFGMSRKIGHAC-ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDN--------QETYLNI 245 (327)
T ss_dssp ECCGGGCEEC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHH
T ss_pred EeeCccccccCCcc-ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc--------hHHHHHH
Confidence 99999998765432 23446799999999999999999999999999999999999999964221 1111111
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 662 LDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
.......+.......+..+.+++.+||+.||++|||++++++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 246 SQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp HHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred HhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 1111111111222334568899999999999999999999863
No 157
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=7.4e-40 Score=357.46 Aligned_cols=252 Identities=25% Similarity=0.364 Sum_probs=201.4
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIV 513 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 513 (707)
.++|++.+.||+|+||.||+|+. .+++.||+|++....... .....+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVST-SSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCc-hHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 45799999999999999999965 578999999987543222 2346788999999999999999999999999999999
Q ss_pred EeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCC---CCeEEecccccee
Q 038671 514 YEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLE---NEAHVSDFGTAKF 590 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~---~~~kl~Dfg~~~~ 590 (707)
|||+.+|+|.+.+... ..+++..++.++.||+.||+|||+. ||+||||||+||+++.. +.+||+|||++..
T Consensus 115 ~e~~~~g~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 115 MECYKGGELFDEIIHR---MKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp EECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred EecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 9999999999888543 4589999999999999999999999 99999999999999764 4599999999987
Q ss_pred cCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCC
Q 038671 591 LKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPS 670 (707)
Q Consensus 591 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (707)
..... ......||+.|+|||++.+ .++.++||||+|+++|+|++|+.||..... ......+.......+.
T Consensus 189 ~~~~~-~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~~i~~~~~~~~~ 258 (494)
T 3lij_A 189 FENQK-KMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTD--------QEILRKVEKGKYTFDS 258 (494)
T ss_dssp CBTTB-CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTCCCCCS
T ss_pred CCCCc-cccccCCCcCeeCHHHHcc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCCCCCc
Confidence 65432 3345679999999998764 699999999999999999999999964221 2222223333333222
Q ss_pred cchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 671 HNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 671 ~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
......+..+.+++.+||+.||.+|||+.|+++
T Consensus 259 ~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 259 PEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp GGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 223344566899999999999999999999885
No 158
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=6.8e-40 Score=337.45 Aligned_cols=263 Identities=23% Similarity=0.379 Sum_probs=210.0
Q ss_pred HHHHHHhcCCCCCceeeecCCeeEEEEEc------CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcC-CCCceeeee
Q 038671 429 EEIIRVTNDFDDEHCIGKGGQGSVYKAEL------PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFY 501 (707)
Q Consensus 429 ~~~~~~~~~~~~~~~lg~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~ 501 (707)
..+....++|++.+.||+|+||.||+|+. .+++.||+|++..... ....+.+.+|++++.++ +||||++++
T Consensus 20 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 20 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC--HHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCC--cHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 34444568899999999999999999963 4578999999876432 23456789999999999 699999999
Q ss_pred eeeecCC-ceeEEEeeeccCcHHHHHhcccc-------------cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCC
Q 038671 502 GFCSHAR-HSFIVYEYLEMGSLAMILSNDAA-------------AKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDI 567 (707)
Q Consensus 502 ~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl 567 (707)
+++...+ ..++||||+++++|.+++..... ...+++..++.++.|++.||+|||+. ||+||||
T Consensus 98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~di 174 (316)
T 2xir_A 98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDL 174 (316)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred EEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccC
Confidence 9987654 58999999999999999975432 12278999999999999999999999 9999999
Q ss_pred CCCCeeecCCCCeEEeccccceecCCCCCC--ccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcc
Q 038671 568 SSKNVLLDLENEAHVSDFGTAKFLKPDSSN--WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFI 644 (707)
Q Consensus 568 k~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~ 644 (707)
||+||+++.++.+||+|||++......... .....+++.|+|||.+.+..++.++||||||+++|+|++ |+.||...
T Consensus 175 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~ 254 (316)
T 2xir_A 175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254 (316)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCccc
Confidence 999999999999999999999876544322 234567889999999999899999999999999999998 99998643
Q ss_pred cccccccchhhhhhhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 645 SSISSSSSNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
.. ................+ .. .+..+.+++.+||+.||.+|||+.++++.|+
T Consensus 255 ~~----~~~~~~~~~~~~~~~~~--~~----~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 306 (316)
T 2xir_A 255 KI----DEEFCRRLKEGTRMRAP--DY----TTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 306 (316)
T ss_dssp CC----SHHHHHHHHHTCCCCCC--TT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ch----hHHHHHHhccCccCCCC--CC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 21 11122222222222222 11 2345889999999999999999999999875
No 159
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1e-39 Score=337.51 Aligned_cols=260 Identities=25% Similarity=0.361 Sum_probs=206.6
Q ss_pred hcCCCCCceeeecCCeeEEEEE-----cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeee--cC
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAE-----LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCS--HA 507 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~ 507 (707)
.++|++.+.||+|+||.||+|+ ..+++.||+|++... .....+.+.+|++++++++||||+++++++. +.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 98 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGR 98 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSS
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC---CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCC
Confidence 3679999999999999999997 356889999998754 2234567899999999999999999999886 45
Q ss_pred CceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEecccc
Q 038671 508 RHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGT 587 (707)
Q Consensus 508 ~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~ 587 (707)
...++||||+++++|.+++.... ..+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||.
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 173 (327)
T 3lxl_A 99 QSLRLVMEYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGL 173 (327)
T ss_dssp CEEEEEEECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGG
T ss_pred ceEEEEEeecCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEccccc
Confidence 66899999999999999996432 3589999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCC---CccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccc-------cccchhhhh
Q 038671 588 AKFLKPDSS---NWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSIS-------SSSSNLEIA 657 (707)
Q Consensus 588 ~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~-------~~~~~~~~~ 657 (707)
+........ ......+++.|+|||.+.+..++.++||||||+++|+|++|+.||....... .........
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 253 (327)
T 3lxl_A 174 AKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRL 253 (327)
T ss_dssp CEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHH
T ss_pred ceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHH
Confidence 987654432 1233457888999999999889999999999999999999999985322100 001111111
Q ss_pred hhhhcCCC-CCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 658 LNEMLDPR-LPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 658 ~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
........ .+.+ ...+.++.+++.+||+.||++|||++++++.|+
T Consensus 254 ~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 299 (327)
T 3lxl_A 254 LELLEEGQRLPAP----PACPAEVHELMKLCWAPSPQDRPSFSALGPQLD 299 (327)
T ss_dssp HHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHhhcccCCCCC----CcccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 22222111 1111 123456899999999999999999999999875
No 160
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=5.7e-40 Score=337.91 Aligned_cols=261 Identities=19% Similarity=0.320 Sum_probs=199.9
Q ss_pred hcCCCCC-ceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcC-CCCceeeeeeeeecCCcee
Q 038671 435 TNDFDDE-HCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGFCSHARHSF 511 (707)
Q Consensus 435 ~~~~~~~-~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 511 (707)
.+.|++. +.||+|+||.||+|.. .+++.||||++..... ...+.+.+|++++.++ +||||+++++++.+++..+
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~ 87 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG---HIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFY 87 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSS---CCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcc---hhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEE
Confidence 4678884 7899999999999964 5799999999875422 2356788999999885 7999999999999999999
Q ss_pred EEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCC---eEEeccccc
Q 038671 512 IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENE---AHVSDFGTA 588 (707)
Q Consensus 512 lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~---~kl~Dfg~~ 588 (707)
+||||+++++|.+++... ..+++..++.++.||+.||+|||+. +|+||||||+||+++.++. +||+|||++
T Consensus 88 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~ 161 (316)
T 2ac3_A 88 LVFEKMRGGSILSHIHKR---RHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLG 161 (316)
T ss_dssp EEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCC
T ss_pred EEEEcCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCc
Confidence 999999999999999653 4589999999999999999999999 9999999999999998776 999999999
Q ss_pred eecCCCC-------CCccccccccCCCCcccccc-----CCCCccchhHHHHHHHHHHHhCCCCCCcccccccc------
Q 038671 589 KFLKPDS-------SNWAELAGTYGYVAPELAYT-----MKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSS------ 650 (707)
Q Consensus 589 ~~~~~~~-------~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~------ 650 (707)
....... .......||+.|+|||.+.+ ..++.++||||||+++|+|++|+.||.........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 241 (316)
T 2ac3_A 162 SGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEA 241 (316)
T ss_dssp C-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----C
T ss_pred cccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccccccccc
Confidence 7654221 11233468999999999875 45889999999999999999999999643221100
Q ss_pred -cchhhhhhhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 651 -SSNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 651 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
..........+.......+.......+.++.+++.+||+.||++|||++|+++.
T Consensus 242 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 242 CPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp CHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred chhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 000111222222333322211112234568999999999999999999999873
No 161
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=5e-40 Score=339.74 Aligned_cols=259 Identities=20% Similarity=0.292 Sum_probs=192.9
Q ss_pred HHhcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCcee
Q 038671 433 RVTNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSF 511 (707)
Q Consensus 433 ~~~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 511 (707)
...++|++.+.||+|+||.||+|. ..+++.||+|++..... .......+.+|++++++++||||+++++++.+++..+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE-EEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC---------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccccc-ccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence 445789999999999999999995 56799999999975432 2233456789999999999999999999999999999
Q ss_pred EEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeec-----CCCCeEEeccc
Q 038671 512 IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLD-----LENEAHVSDFG 586 (707)
Q Consensus 512 lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~-----~~~~~kl~Dfg 586 (707)
+||||+++ +|.+++... ..+++..++.++.||+.||+|||+. ||+||||||+||+++ .++.+||+|||
T Consensus 110 lv~e~~~~-~L~~~~~~~---~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg 182 (329)
T 3gbz_A 110 LIFEYAEN-DLKKYMDKN---PDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFG 182 (329)
T ss_dssp EEEECCSE-EHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTT
T ss_pred EEEecCCC-CHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCC
Confidence 99999985 899988643 3489999999999999999999999 999999999999994 44569999999
Q ss_pred cceecCCCCCCccccccccCCCCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCC-
Q 038671 587 TAKFLKPDSSNWAELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDP- 664 (707)
Q Consensus 587 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~- 664 (707)
++..............||+.|+|||++.+.. ++.++||||||+++|+|++|+.||....... ...........+
T Consensus 183 ~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~----~~~~~~~~~~~~~ 258 (329)
T 3gbz_A 183 LARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID----QLFKIFEVLGLPD 258 (329)
T ss_dssp HHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHHHHCCCC
T ss_pred CccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHH----HHHHHHHHhCCCc
Confidence 9987765544455567899999999988744 7999999999999999999999996432211 111111110000
Q ss_pred ---------------CCCCCC-cchH-----HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 665 ---------------RLPTPS-HNVQ-----DKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 665 ---------------~~~~~~-~~~~-----~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
..+... .... ..+.++.+++.+||+.||++|||++|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 259 DTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 000000 0000 12356889999999999999999999986
No 162
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.1e-40 Score=337.16 Aligned_cols=253 Identities=24% Similarity=0.444 Sum_probs=196.3
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-CCCc----EEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCc
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-PSGE----IVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARH 509 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 509 (707)
.++|++.+.||+|+||.||+|.. .+++ +|++|.+..... ....+.+.+|+.++++++||||+++++++....
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~- 90 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTST- 90 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSS--CCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccC--HHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-
Confidence 46799999999999999999964 4454 357777754322 234577899999999999999999999998754
Q ss_pred eeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccce
Q 038671 510 SFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAK 589 (707)
Q Consensus 510 ~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~ 589 (707)
.++++||+.+|+|.+++... ...+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.
T Consensus 91 ~~~v~~~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~ 165 (327)
T 3lzb_A 91 VQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEEECCCSSCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC--
T ss_pred ceEEEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCccee
Confidence 78999999999999999643 34589999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCCC--ccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchhhhhhhhhcCCCC
Q 038671 590 FLKPDSSN--WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNLEIALNEMLDPRL 666 (707)
Q Consensus 590 ~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (707)
........ .....+++.|+|||.+.+..++.++||||||+++|+|++ |+.||+.... .......... ...
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~-----~~~~~~~~~~--~~~ 238 (327)
T 3lzb_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-----SEISSILEKG--ERL 238 (327)
T ss_dssp --------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----GGHHHHHHTT--CCC
T ss_pred EccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCH-----HHHHHHHHcC--CCC
Confidence 76543222 233456788999999999999999999999999999999 9999974322 1111122111 122
Q ss_pred CCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 667 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
+.+.. .+.++.+++.+||+.||.+||++.|+++.|+
T Consensus 239 ~~~~~----~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 274 (327)
T 3lzb_A 239 PQPPI----CTIDVYMIMRKCWMIDADSRPKFRELIIEFS 274 (327)
T ss_dssp CCCTT----BCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCcc----CCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 22222 2345889999999999999999999999874
No 163
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.3e-39 Score=334.99 Aligned_cols=256 Identities=24% Similarity=0.395 Sum_probs=202.4
Q ss_pred CCCCceeeecCCeeEEEEEc-----CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecC--Cce
Q 038671 438 FDDEHCIGKGGQGSVYKAEL-----PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHA--RHS 510 (707)
Q Consensus 438 ~~~~~~lg~G~~g~vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~ 510 (707)
|++.+.||+|+||.||++.. .+++.||+|++.... .....+.+.+|++++++++||||+++++++.+. ...
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 110 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA--GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASL 110 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc--ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceE
Confidence 48999999999999988843 368899999997653 233567799999999999999999999999874 578
Q ss_pred eEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEecccccee
Q 038671 511 FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKF 590 (707)
Q Consensus 511 ~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~ 590 (707)
++||||+++++|.+++... .+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++..
T Consensus 111 ~lv~e~~~~~~L~~~l~~~----~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 183 (318)
T 3lxp_A 111 QLVMEYVPLGSLRDYLPRH----SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKA 183 (318)
T ss_dssp EEEECCCTTCBHHHHGGGS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEEecccCCcHHHHHhhC----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccc
Confidence 9999999999999998643 389999999999999999999999 999999999999999999999999999988
Q ss_pred cCCCCCC---ccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccc-------ccccchhhhhhhh
Q 038671 591 LKPDSSN---WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSI-------SSSSSNLEIALNE 660 (707)
Q Consensus 591 ~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~-------~~~~~~~~~~~~~ 660 (707)
....... .....+++.|+|||.+.+..++.++||||||+++|+|++|+.||...... .............
T Consensus 184 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (318)
T 3lxp_A 184 VPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTEL 263 (318)
T ss_dssp CCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHH
T ss_pred ccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHH
Confidence 7644321 23346788899999999988999999999999999999999998632110 0000001111111
Q ss_pred hcCC-CCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 661 MLDP-RLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 661 ~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
.... ..+.+. ..+.++.+++.+||+.||++|||++++++.|+
T Consensus 264 ~~~~~~~~~~~----~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 306 (318)
T 3lxp_A 264 LERGERLPRPD----KCPAEVYHLMKNCWETEASFRPTFENLIPILK 306 (318)
T ss_dssp HHTTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HhcccCCCCCc----cccHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 1111 112221 23456899999999999999999999999875
No 164
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.1e-39 Score=345.38 Aligned_cols=259 Identities=24% Similarity=0.369 Sum_probs=191.7
Q ss_pred HHhcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCC-CCceeeeeeeeecCC--
Q 038671 433 RVTNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR-HRNIVKFYGFCSHAR-- 508 (707)
Q Consensus 433 ~~~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~-- 508 (707)
...++|++.+.||+|+||.||+|. ..+|+.||+|++...... ......+.+|+.++.++. ||||+++++++...+
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~-~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~ 84 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQN-STDAQRTFREIMILTELSGHENIVNLLNVLRADNDR 84 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CC-HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSS
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccC-hHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCC
Confidence 456899999999999999999995 567999999998654333 334567889999999997 999999999997544
Q ss_pred ceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccc
Q 038671 509 HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTA 588 (707)
Q Consensus 509 ~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~ 588 (707)
..|+||||++ ++|..++.. ..+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||++
T Consensus 85 ~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a 156 (388)
T 3oz6_A 85 DVYLVFDYME-TDLHAVIRA----NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLS 156 (388)
T ss_dssp CEEEEEECCS-EEHHHHHHH----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecccC-cCHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccc
Confidence 6899999998 588888864 3589999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCC---------------------CCCccccccccCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCcccc
Q 038671 589 KFLKPD---------------------SSNWAELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISS 646 (707)
Q Consensus 589 ~~~~~~---------------------~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~ 646 (707)
+..... .......+||+.|+|||++.+ ..++.++||||+||++|||++|++||...+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~ 236 (388)
T 3oz6_A 157 RSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST 236 (388)
T ss_dssp EESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 875431 112334579999999999876 6689999999999999999999999964322
Q ss_pred cccccchhhhhhhhhcCCC--------------------------CCCCCcchH-------------HHHHHHHHHHHhc
Q 038671 647 ISSSSSNLEIALNEMLDPR--------------------------LPTPSHNVQ-------------DKLISIMEVAISC 687 (707)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~-------------~~~~~l~~li~~c 687 (707)
.. ...........+. ........+ ..+.++.+++.+|
T Consensus 237 ~~----~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~ 312 (388)
T 3oz6_A 237 MN----QLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKL 312 (388)
T ss_dssp HH----HHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHH
T ss_pred HH----HHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHh
Confidence 11 1111110000000 000000000 1234688999999
Q ss_pred cCCCCCCCCCHHHHHHH
Q 038671 688 LDESPESRPTIQKVSQL 704 (707)
Q Consensus 688 l~~~P~~Rps~~~l~~~ 704 (707)
|..||++|||++|+++.
T Consensus 313 L~~dP~~R~t~~e~l~H 329 (388)
T 3oz6_A 313 LQFNPNKRISANDALKH 329 (388)
T ss_dssp CCSSGGGSCCHHHHTTS
T ss_pred hccCcccCCCHHHHhCC
Confidence 99999999999999864
No 165
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=3.8e-40 Score=351.41 Aligned_cols=257 Identities=22% Similarity=0.304 Sum_probs=194.0
Q ss_pred HHhcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCc-----hhhhHHHHHHHHHHHhcCCCCceeeeeeeeec
Q 038671 433 RVTNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPS-----EMASQQEFLNEVKTLTGIRHRNIVKFYGFCSH 506 (707)
Q Consensus 433 ~~~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 506 (707)
.+.++|++.+.||+|+||.||+|. ..+++.||+|++...... .......+.+|++++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 456899999999999999999995 567899999998643211 11122358899999999999999999999865
Q ss_pred CCceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCC---CeEEe
Q 038671 507 ARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLEN---EAHVS 583 (707)
Q Consensus 507 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~---~~kl~ 583 (707)
+..++||||+++++|.+++... +.+++..++.++.|++.||+|||++ +|+||||||+||+++.++ .+||+
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~ 284 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVGN---KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT 284 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred -CceEEEEEcCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEe
Confidence 4578999999999999887543 4589999999999999999999999 999999999999997544 59999
Q ss_pred ccccceecCCCCCCccccccccCCCCcccccc---CCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhh
Q 038671 584 DFGTAKFLKPDSSNWAELAGTYGYVAPELAYT---MKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNE 660 (707)
Q Consensus 584 Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 660 (707)
|||+++..... .......||+.|+|||++.+ ..++.++||||||+++|+|++|+.||...... ... ...
T Consensus 285 DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~----~~~---~~~ 356 (419)
T 3i6u_A 285 DFGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ----VSL---KDQ 356 (419)
T ss_dssp CSSTTTSCC------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSS----CCH---HHH
T ss_pred ecccceecCCC-ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcch----HHH---HHH
Confidence 99999876533 23345689999999999863 56788999999999999999999999642211 111 111
Q ss_pred hcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 661 MLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
+...............+.++.+++.+||+.||++||+++|+++.
T Consensus 357 i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 357 ITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp HHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 22222222211222335568999999999999999999999863
No 166
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=4.9e-40 Score=358.38 Aligned_cols=254 Identities=24% Similarity=0.327 Sum_probs=205.3
Q ss_pred HhcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeE
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFI 512 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 512 (707)
+.++|++.+.||+|+||+||+|.. .+++.||+|++...... ......+.+|++++++++||||+++++++.+.+..++
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 98 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHB-CSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEeccccc-chHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEE
Confidence 446799999999999999999965 57999999998542111 1235678999999999999999999999999999999
Q ss_pred EEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeec---CCCCeEEeccccce
Q 038671 513 VYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLD---LENEAHVSDFGTAK 589 (707)
Q Consensus 513 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~---~~~~~kl~Dfg~~~ 589 (707)
||||+.+++|.+.+... +.+++..++.++.||+.||+|||++ ||+||||||+||+++ .++.+||+|||++.
T Consensus 99 v~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 172 (486)
T 3mwu_A 99 VGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (486)
T ss_dssp EECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred EEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence 99999999999988543 4589999999999999999999999 999999999999995 45679999999998
Q ss_pred ecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCC
Q 038671 590 FLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTP 669 (707)
Q Consensus 590 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (707)
..... .......||+.|+|||++.+ .++.++||||+|+++|+|++|+.||.... .......+........
T Consensus 173 ~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~~~i~~~~~~~~ 242 (486)
T 3mwu_A 173 CFQQN-TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN--------EYDILKRVETGKYAFD 242 (486)
T ss_dssp TBCCC-----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHTCCCSC
T ss_pred ECCCC-CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCCCCCC
Confidence 66543 23345679999999999876 49999999999999999999999996322 1222222333333322
Q ss_pred CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 670 SHNVQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 670 ~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
.......+.++.+++.+||+.||++|||+.++++.
T Consensus 243 ~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 243 LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 22333445678999999999999999999999863
No 167
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.5e-40 Score=343.44 Aligned_cols=252 Identities=25% Similarity=0.406 Sum_probs=191.0
Q ss_pred CCCCCceeeecCCeeEEEEEcC--CC--cEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeee-cCCcee
Q 038671 437 DFDDEHCIGKGGQGSVYKAELP--SG--EIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCS-HARHSF 511 (707)
Q Consensus 437 ~~~~~~~lg~G~~g~vy~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~-~~~~~~ 511 (707)
.|++.+.||+|+||.||+|... ++ ..||+|.+.... .....+.+.+|+.++++++||||+++++++. .++..+
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~ 167 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 167 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS--CSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeE
Confidence 4667789999999999999643 22 468999986532 2345678999999999999999999999875 456889
Q ss_pred EEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceec
Q 038671 512 IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFL 591 (707)
Q Consensus 512 lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~ 591 (707)
+||||+++++|.+++... ...+++..++.++.||++||+|||+. ||+||||||+||+++.++.+||+|||+++..
T Consensus 168 lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 242 (373)
T 3c1x_A 168 VVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDM 242 (373)
T ss_dssp EEEECCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EEEECCCCCCHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccccc
Confidence 999999999999999643 34578999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCC----CccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchhhhhhhhhcCCCC
Q 038671 592 KPDSS----NWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNLEIALNEMLDPRL 666 (707)
Q Consensus 592 ~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (707)
..... ......+++.|+|||.+.+..++.++||||||+++|||++ |.+||...... . ....... ..+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~----~-~~~~~~~--~~~~ 315 (373)
T 3c1x_A 243 YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF----D-ITVYLLQ--GRRL 315 (373)
T ss_dssp ---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS----C-HHHHHHT--TCCC
T ss_pred cccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH----H-HHHHHHc--CCCC
Confidence 43321 1233456788999999999999999999999999999999 67787643221 1 1111111 1122
Q ss_pred CCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 667 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
..+. ..+..+.+++.+||+.||++||++.++++.|+
T Consensus 316 ~~p~----~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~ 351 (373)
T 3c1x_A 316 LQPE----YCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 351 (373)
T ss_dssp CCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 2222 12345889999999999999999999999874
No 168
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.7e-39 Score=333.86 Aligned_cols=257 Identities=24% Similarity=0.377 Sum_probs=195.5
Q ss_pred HhcCCCCCceeeecCCeeEEEEEcC----CCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCC-
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAELP----SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHAR- 508 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~- 508 (707)
..++|++.+.||+|+||.||+|... +++.||+|++...... ....+.+.+|+.++++++||||+++++++.+.+
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSS-QREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCC-HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccc-hhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 3567889999999999999999543 3568999998754332 334567899999999999999999999997654
Q ss_pred ----ceeEEEeeeccCcHHHHHhcc---cccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeE
Q 038671 509 ----HSFIVYEYLEMGSLAMILSND---AAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAH 581 (707)
Q Consensus 509 ----~~~lv~e~~~~~~L~~~l~~~---~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~k 581 (707)
..++||||+++++|.+++... .....+++..++.++.||++||+|||+. ||+||||||+||+++.++.+|
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~k 187 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVC 187 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEE
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEE
Confidence 359999999999999998432 2235689999999999999999999999 999999999999999999999
Q ss_pred EeccccceecCCCCC--CccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchhhhhh
Q 038671 582 VSDFGTAKFLKPDSS--NWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNLEIAL 658 (707)
Q Consensus 582 l~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~ 658 (707)
|+|||++........ ......+++.|+|||.+.+..++.++||||||+++|+|++ |..||..... . ...
T Consensus 188 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-----~---~~~ 259 (313)
T 3brb_A 188 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN-----H---EMY 259 (313)
T ss_dssp ECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG-----G---GHH
T ss_pred EeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCH-----H---HHH
Confidence 999999987654321 1233457889999999999899999999999999999999 8999864322 1 111
Q ss_pred hhhcCC-CCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 659 NEMLDP-RLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 659 ~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
...... ....+. ..+.++.+++.+||+.||.+||++.++++.|+
T Consensus 260 ~~~~~~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 304 (313)
T 3brb_A 260 DYLLHGHRLKQPE----DCLDELYEIMYSCWRTDPLDRPTFSVLRLQLE 304 (313)
T ss_dssp HHHHTTCCCCCBT----TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHcCCCCCCCc----cccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111111 111111 23346899999999999999999999999875
No 169
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=2.1e-39 Score=330.76 Aligned_cols=254 Identities=25% Similarity=0.398 Sum_probs=199.3
Q ss_pred hcCCCCCceeeecCCeeEEEEEcCC----CcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeee-ecCCc
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAELPS----GEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFC-SHARH 509 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~-~~~~~ 509 (707)
..+|++.+.||+|+||.||+|...+ +..+|+|++.... .....+.+.+|+.++++++||||+++++++ ..++.
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 101 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS 101 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCC--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSC
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCC--CHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCc
Confidence 4568889999999999999996432 2368999987542 334567789999999999999999999985 45668
Q ss_pred eeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccce
Q 038671 510 SFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAK 589 (707)
Q Consensus 510 ~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~ 589 (707)
.++||||+++++|.+++... ...+++..++.++.|++.||+|||++ |++||||||+||+++.++.+||+|||++.
T Consensus 102 ~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~ 176 (298)
T 3f66_A 102 PLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 176 (298)
T ss_dssp CEEEEECCTTCBHHHHHHCT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGC
T ss_pred eEEEEeCCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccc
Confidence 89999999999999999643 34589999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCC----CCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchhhhhhhhhcCC
Q 038671 590 FLKPDS----SNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNLEIALNEMLDP 664 (707)
Q Consensus 590 ~~~~~~----~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 664 (707)
...... .......+|+.|+|||.+.+..++.++||||+|+++|+|++ |.+||..... ......... ..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~-----~~~~~~~~~--~~ 249 (298)
T 3f66_A 177 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-----FDITVYLLQ--GR 249 (298)
T ss_dssp CCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCT-----TTHHHHHHT--TC
T ss_pred cccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCH-----HHHHHHHhc--CC
Confidence 664332 11233467789999999999899999999999999999999 5566643221 111111111 11
Q ss_pred CCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 665 RLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 665 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
....+.. .+..+.+++.+||+.||++||++.++++.|+
T Consensus 250 ~~~~~~~----~~~~l~~li~~~l~~~p~~Rps~~ell~~L~ 287 (298)
T 3f66_A 250 RLLQPEY----CPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 287 (298)
T ss_dssp CCCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCcc----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111111 2345889999999999999999999999875
No 170
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=5.1e-40 Score=342.11 Aligned_cols=261 Identities=20% Similarity=0.251 Sum_probs=196.7
Q ss_pred hcCCCCCceeeecCCeeEEEEEcC----CCcEEEEEecCCCCCchhh--------hHHHHHHHHHHHhcCCCCceeeeee
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAELP----SGEIVAVKKFHSPLPSEMA--------SQQEFLNEVKTLTGIRHRNIVKFYG 502 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~--------~~~~~~~e~~~l~~l~h~niv~~~~ 502 (707)
.++|++.+.||+|+||.||+|... ++..+|+|+.......... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 367999999999999999999654 5788999998765322111 1123667889999999999999999
Q ss_pred eeec----CCceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCC
Q 038671 503 FCSH----ARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLEN 578 (707)
Q Consensus 503 ~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~ 578 (707)
++.. ....++||||+ +++|.+++.... .+++..++.++.||+.||+|||+. ||+||||||+||+++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~ 188 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKN 188 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCC
Confidence 9977 67899999999 999999986433 689999999999999999999999 999999999999999887
Q ss_pred --CeEEeccccceecCCCCC-------CccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccc
Q 038671 579 --EAHVSDFGTAKFLKPDSS-------NWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISS 649 (707)
Q Consensus 579 --~~kl~Dfg~~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~ 649 (707)
.+||+|||+++.+..... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||......
T Consensus 189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-- 266 (345)
T 2v62_A 189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKD-- 266 (345)
T ss_dssp TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTC--
T ss_pred CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccc--
Confidence 999999999987643221 124457999999999999988999999999999999999999999532110
Q ss_pred ccchhhhhhhhhcCCCCCCCCc---chHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 650 SSSNLEIALNEMLDPRLPTPSH---NVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
....... ........+.... .....+.++.+++.+||+.||++||+++++++.|+
T Consensus 267 -~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 324 (345)
T 2v62_A 267 -PVAVQTA-KTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILN 324 (345)
T ss_dssp -HHHHHHH-HHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHC
T ss_pred -cHHHHHH-HHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHh
Confidence 0111111 1111111110000 00023346999999999999999999999999886
No 171
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=334.01 Aligned_cols=261 Identities=23% Similarity=0.328 Sum_probs=197.1
Q ss_pred HhcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCc--hhhhHHHHHHHHHHHhcC---CCCceeeeeeeeecC
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPS--EMASQQEFLNEVKTLTGI---RHRNIVKFYGFCSHA 507 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~ 507 (707)
..++|++.+.||+|+||+||+|+. .+++.||+|++...... .......+.+|+..++++ +||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 467899999999999999999965 57899999998632211 111123455666666666 599999999999765
Q ss_pred C-----ceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEE
Q 038671 508 R-----HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHV 582 (707)
Q Consensus 508 ~-----~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl 582 (707)
. ..++||||+. ++|.+++..... ..+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl 161 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPP-PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKL 161 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEE
Confidence 4 4799999997 599999875432 3489999999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhc
Q 038671 583 SDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEML 662 (707)
Q Consensus 583 ~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 662 (707)
+|||++...... .......||+.|+|||.+.+..++.++||||||+++|+|++|+.||....... ..........
T Consensus 162 ~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~----~~~~i~~~~~ 236 (308)
T 3g33_A 162 ADFGLARIYSYQ-MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD----QLGKIFDLIG 236 (308)
T ss_dssp CSCSCTTTSTTC-CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH----HHHHHHHHHC
T ss_pred eeCccccccCCC-cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHhC
Confidence 999999866533 23355688999999999999999999999999999999999999996432211 1111111100
Q ss_pred C---CCC---------------CCC-CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 663 D---PRL---------------PTP-SHNVQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 663 ~---~~~---------------~~~-~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
. ..+ +.+ ....++.+.++.+++.+||+.||++|||+.|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 237 LPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp CCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 0 000 000 00011234568899999999999999999999863
No 172
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2e-39 Score=377.00 Aligned_cols=350 Identities=24% Similarity=0.240 Sum_probs=235.2
Q ss_pred CCCCceeeccCCeeeecCCccccCCCCCCeEECCCCcccc-ccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCee
Q 038671 2 LSNLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCG-SIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLL 80 (707)
Q Consensus 2 l~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~-~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 80 (707)
.++|++|+|++|.|++..|..|+++++|++|+|++|.... +.|++|.++++|++|+|++|.|++..|.+|+++++|++|
T Consensus 23 p~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 102 (844)
T 3j0a_A 23 LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFEL 102 (844)
T ss_dssp CTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCE
T ss_pred CCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEe
Confidence 3678888888888887778888888888888888884433 336778888888888888888887778888888888888
Q ss_pred eccccccccc-CCC--CCCCCCccEEEeccCccccccC-ccccCCCCCcEEEcccccccccCCCCCC-------------
Q 038671 81 TLENNQLRGP-IPN--LRNLTSLVRVRLNQNHLTGNIS-ESFGIHPNLAFIDLSHNYFYGEISSDWG------------- 143 (707)
Q Consensus 81 ~l~~n~i~~~-~~~--l~~l~~L~~L~l~~n~l~~~~~-~~~~~~~~L~~L~L~~n~i~~~~~~~~~------------- 143 (707)
+|++|.+.+. +.. +.++++|++|+|++|.++++.+ ..|+.+++|++|+|++|.++.+.+..+.
T Consensus 103 ~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~ 182 (844)
T 3j0a_A 103 RLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLA 182 (844)
T ss_dssp ECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEEC
T ss_pred eCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECC
Confidence 8888887752 333 7778888888888888776644 4677777777777777776543222111
Q ss_pred -------------C------------------------------------------------------------------
Q 038671 144 -------------R------------------------------------------------------------------ 144 (707)
Q Consensus 144 -------------~------------------------------------------------------------------ 144 (707)
.
T Consensus 183 ~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~ 262 (844)
T 3j0a_A 183 ANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAG 262 (844)
T ss_dssp CSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTT
T ss_pred CCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhc
Confidence 1
Q ss_pred --CCCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccE
Q 038671 145 --CPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLER 222 (707)
Q Consensus 145 --~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 222 (707)
.++|+.|+|++|.+++..+..|..+++|+.|+|++|.+++..+..|..+++|++|++++|.+++..+..|..+++|++
T Consensus 263 l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 342 (844)
T 3j0a_A 263 LARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAY 342 (844)
T ss_dssp TTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCE
T ss_pred cccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCE
Confidence 133445555555554444555666677777777777777666667777777777777777777666777777777777
Q ss_pred EEccCCccCCCCCccccCcccCceEeeecccccccC----------------------------------------chhh
Q 038671 223 LDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKI----------------------------------------PVEL 262 (707)
Q Consensus 223 L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~----------------------------------------~~~~ 262 (707)
|++++|.++...+..|.++++|+.|+|++|.+++.. +..+
T Consensus 343 L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~ 422 (844)
T 3j0a_A 343 IDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFL 422 (844)
T ss_dssp EECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHH
T ss_pred EECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhh
Confidence 777777777666666777777777777777654321 0112
Q ss_pred hhcccCCeeeecCccCCCC------------------------------CCcccccccccceEeccccccCCchhHhhcc
Q 038671 263 EKLIHLSELDLSHNFLGEE------------------------------MPSQICNMQSLEKLNLSHNNLSGFIPSCFEE 312 (707)
Q Consensus 263 ~~l~~L~~L~l~~n~l~~~------------------------------~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~ 312 (707)
..+++|+.|+|++|.+++. .+..|..+++|+.|+|++|.+++..+..+..
T Consensus 423 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 502 (844)
T 3j0a_A 423 LRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSH 502 (844)
T ss_dssp TTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSS
T ss_pred hcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccc
Confidence 2445555555555555321 1234566777888888888888777777777
Q ss_pred CCCceeEeeccCcccccCCCcc--------------------ccccCchhhcccCcCcC
Q 038671 313 LHGLSYIDISYNELHGSIPNST--------------------AFRDAPMEALQGNKGLC 351 (707)
Q Consensus 313 ~~~L~~l~l~~n~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~c 351 (707)
+++|+.|++++|++++.++... .+.......+.+|++.|
T Consensus 503 l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C 561 (844)
T 3j0a_A 503 LTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFIC 561 (844)
T ss_dssp CCSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCC
T ss_pred hhhhheeECCCCCCCccChhhhhccccEEECCCCcCCCCChhHhCCcCEEEecCCCccc
Confidence 7777777777777776544321 12344456677888877
No 173
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.4e-39 Score=328.08 Aligned_cols=254 Identities=25% Similarity=0.354 Sum_probs=204.6
Q ss_pred HhcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeE
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFI 512 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 512 (707)
+.++|++.+.||+|+||.||+|.. .+++.||+|++..... ....+.+.+|+.+++.++||||+++++++.+++..++
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 82 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 82 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC--TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc--hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEE
Confidence 456799999999999999999965 4789999999864322 2345678999999999999999999999999999999
Q ss_pred EEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecC
Q 038671 513 VYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLK 592 (707)
Q Consensus 513 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~ 592 (707)
||||+++++|.+++... ..+++..++.++.|++.||+|||+. |++||||||+||+++.++.+||+|||.+....
T Consensus 83 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 156 (276)
T 2yex_A 83 FLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFR 156 (276)
T ss_dssp EEECCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred EEEecCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccC
Confidence 99999999999988543 4589999999999999999999999 99999999999999999999999999998654
Q ss_pred CCC--CCccccccccCCCCccccccCCC-CccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCC
Q 038671 593 PDS--SNWAELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTP 669 (707)
Q Consensus 593 ~~~--~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (707)
... .......|++.|+|||.+.+..+ +.++||||||+++|+|++|+.||+..... ...... .........
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~----~~~~~~~~~ 229 (276)
T 2yex_A 157 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS---CQEYSD----WKEKKTYLN 229 (276)
T ss_dssp ETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTT---SHHHHH----HHTTCTTST
T ss_pred CCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchH---HHHHHH----hhhcccccC
Confidence 322 22344678999999999987665 77899999999999999999999743221 011111 111111110
Q ss_pred CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 670 SHNVQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 670 ~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
.....+..+.+++.+||+.||++|||++|+++.
T Consensus 230 --~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 230 --PWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp --TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred --chhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 112334568899999999999999999999863
No 174
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.7e-39 Score=328.37 Aligned_cols=253 Identities=23% Similarity=0.378 Sum_probs=200.6
Q ss_pred hcCCCCCceeeecCCeeEEEEEcC----CCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCce
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAELP----SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHS 510 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 510 (707)
.++|++.+.||+|+||.||+|... ++..||+|++.... .....+.+.+|+.++++++||||+++++++.+ +..
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~ 87 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC--TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPT 87 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS--CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSC
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc--CchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCC
Confidence 467999999999999999999643 23469999987643 23356779999999999999999999999865 457
Q ss_pred eEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEecccccee
Q 038671 511 FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKF 590 (707)
Q Consensus 511 ~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~ 590 (707)
++||||+++++|.+++... ...+++..++.++.|++.||+|||++ |++||||||+||+++.++.+||+|||.+..
T Consensus 88 ~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 88 WIIMELYPYGELGHYLERN--KNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRY 162 (281)
T ss_dssp EEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred EEEEecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCcc
Confidence 8999999999999999643 34589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC-CccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchhhhhhhhhcCCCCCC
Q 038671 591 LKPDSS-NWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNLEIALNEMLDPRLPT 668 (707)
Q Consensus 591 ~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (707)
...... ......+++.|+|||.+.+..++.++||||||+++|+|++ |+.||..... .......... ...+.
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~-----~~~~~~~~~~--~~~~~ 235 (281)
T 3cc6_A 163 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN-----KDVIGVLEKG--DRLPK 235 (281)
T ss_dssp C---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCG-----GGHHHHHHHT--CCCCC
T ss_pred cccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCCh-----HHHHHHHhcC--CCCCC
Confidence 654322 2233456889999999998889999999999999999998 9999864322 1111111111 11222
Q ss_pred CCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 669 PSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 669 ~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
+.. .+..+.+++.+||+.||++||++.++++.|+
T Consensus 236 ~~~----~~~~l~~li~~~l~~~p~~Rps~~ell~~L~ 269 (281)
T 3cc6_A 236 PDL----CPPVLYTLMTRCWDYDPSDRPRFTELVCSLS 269 (281)
T ss_dssp CTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCC----CCHHHHHHHHHHccCCchhCcCHHHHHHHHH
Confidence 221 2345889999999999999999999999875
No 175
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=8e-39 Score=360.13 Aligned_cols=299 Identities=22% Similarity=0.225 Sum_probs=256.6
Q ss_pred CCcEEEcccCcCcccCCccccCCCCCCeeecccccccccCCCCCCCCCccEEEeccCccccccCccccCCCCCcEEEccc
Q 038671 52 QITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRGPIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSH 131 (707)
Q Consensus 52 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~ 131 (707)
+|++|++++|.+++..+..|+.+++|++|++++|.++.++..+..+++|++|++++|+++.+.+..+..+++|++|++++
T Consensus 255 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 334 (606)
T 3t6q_A 255 SVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKG 334 (606)
T ss_dssp EEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCSCCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCS
T ss_pred ceeEEEeecCccCccCHHHhccccCCCEEeccCCccCCCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCC
Confidence 34555555566665556668888999999999999998888899999999999999999988888899999999999999
Q ss_pred cccc-ccCCCCCCCCCCCcEEEcCCCccCCCC--chhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCcccc
Q 038671 132 NYFY-GEISSDWGRCPKLGTLDFSSNNITGSM--PAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCG 208 (707)
Q Consensus 132 n~i~-~~~~~~~~~~~~L~~L~L~~n~i~~~~--~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 208 (707)
|.+. .+.+..+..+++|++|++++|.+++.. +..+..+++|+.|++++|.+.+..+..|..+++|++|++++|.+++
T Consensus 335 n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 414 (606)
T 3t6q_A 335 NTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKV 414 (606)
T ss_dssp CSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEEC
T ss_pred CCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCC
Confidence 9987 444556889999999999999998665 6778899999999999999988888899999999999999999986
Q ss_pred CCcc-ccCCCCcccEEEccCCccCCCCCccccCcccCceEeeeccccccc---CchhhhhcccCCeeeecCccCCCCCCc
Q 038671 209 QLSL-ELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKK---IPVELEKLIHLSELDLSHNFLGEEMPS 284 (707)
Q Consensus 209 ~~~~-~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~---~~~~~~~l~~L~~L~l~~n~l~~~~~~ 284 (707)
..+. .+..+++|++|++++|.+++..+..+..+++|++|++++|++.+. .+..+..+++|+.|++++|.+++..|.
T Consensus 415 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 494 (606)
T 3t6q_A 415 KDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQH 494 (606)
T ss_dssp CTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTT
T ss_pred cccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChh
Confidence 6554 488999999999999999988888999999999999999998763 335688899999999999999888888
Q ss_pred ccccccccceEeccccccCCchhHhhccCCCceeEeeccCcccccCCCc-cccccCchhhcccCcCcC
Q 038671 285 QICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDISYNELHGSIPNS-TAFRDAPMEALQGNKGLC 351 (707)
Q Consensus 285 ~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~-~~~~~~~~~~~~~~~~~c 351 (707)
.|..+++|+.|++++|++++..|..+..++.| .|++++|++++.+|.. ..+.......+.+|++.|
T Consensus 495 ~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 561 (606)
T 3t6q_A 495 AFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDC 561 (606)
T ss_dssp TTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEEC
T ss_pred hhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccc
Confidence 99999999999999999999889999999999 9999999999877653 445666777888888877
No 176
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=2.3e-39 Score=329.06 Aligned_cols=253 Identities=26% Similarity=0.387 Sum_probs=201.3
Q ss_pred hcCCCCCc-eeeecCCeeEEEEEc---CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCce
Q 038671 435 TNDFDDEH-CIGKGGQGSVYKAEL---PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHS 510 (707)
Q Consensus 435 ~~~~~~~~-~lg~G~~g~vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 510 (707)
.++|++.+ .||+|+||.||+|.. .+++.||||++..... .....+++.+|+++++.++||||+++++++ ..+..
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~ 92 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-DPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW 92 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeeccccc-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCc
Confidence 45688877 999999999999943 3478899999876432 223457799999999999999999999999 56778
Q ss_pred eEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEecccccee
Q 038671 511 FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKF 590 (707)
Q Consensus 511 ~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~ 590 (707)
++||||+++++|.+++... ..+++..++.++.|++.||+|||+. |++||||||+||+++.++.+||+|||++..
T Consensus 93 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 166 (291)
T 1xbb_A 93 MLVMEMAELGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKA 166 (291)
T ss_dssp EEEEECCTTEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEEeCCCCCHHHHHHhC---cCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCccee
Confidence 9999999999999999653 3589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC---ccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchhhhhhhhhcCCCC
Q 038671 591 LKPDSSN---WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNLEIALNEMLDPRL 666 (707)
Q Consensus 591 ~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (707)
....... .....+++.|+|||.+.+..++.++||||||+++|+|++ |+.||..... ............+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~ 241 (291)
T 1xbb_A 167 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG-----SEVTAMLEKGERMGC 241 (291)
T ss_dssp CCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH-----HHHHHHHHTTCCCCC
T ss_pred eccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH-----HHHHHHHHcCCCCCC
Confidence 6544322 122345688999999998889999999999999999999 9999964322 111111211111111
Q ss_pred CCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 667 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
+ . ..+..+.+++.+||+.||++||++.++++.|+
T Consensus 242 ~--~----~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 275 (291)
T 1xbb_A 242 P--A----GCPREMYDLMNLCWTYDVENRPGFAAVELRLR 275 (291)
T ss_dssp C--T----TCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred C--C----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1 1 23456899999999999999999999999875
No 177
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=2.3e-39 Score=337.41 Aligned_cols=257 Identities=23% Similarity=0.373 Sum_probs=204.2
Q ss_pred HHHhcCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhc--CCCCceeeeeeeeecCC-
Q 038671 432 IRVTNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTG--IRHRNIVKFYGFCSHAR- 508 (707)
Q Consensus 432 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~~- 508 (707)
..+.++|++.+.||+|+||.||+|+. +|+.||+|++... ....+.+|++++.. ++||||+++++++....
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~ 110 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR------EERSWFREAEIYQTVMLRHENILGFIAADNKDNG 110 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG------GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCS
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch------hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCC
Confidence 45667899999999999999999987 4899999998532 33567788888877 78999999999998775
Q ss_pred ---ceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHH--------hCCCCCeEecCCCCCCeeecCC
Q 038671 509 ---HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMH--------NDCFPPIVHRDISSKNVLLDLE 577 (707)
Q Consensus 509 ---~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~~~~ivH~dlk~~Nil~~~~ 577 (707)
..++||||+++|+|.+++.. ..+++..++.++.|++.||+||| +. +|+||||||+||+++.+
T Consensus 111 ~~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~ 183 (342)
T 1b6c_B 111 TWTQLWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKN 183 (342)
T ss_dssp SCCCEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTT
T ss_pred ccceeEEEEeecCCCcHHHHHhc----cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCC
Confidence 78999999999999999964 35899999999999999999999 77 99999999999999999
Q ss_pred CCeEEeccccceecCCCCCC----ccccccccCCCCccccccC------CCCccchhHHHHHHHHHHHhC----------
Q 038671 578 NEAHVSDFGTAKFLKPDSSN----WAELAGTYGYVAPELAYTM------KVTEKCDVYSFGVLALEVIKG---------- 637 (707)
Q Consensus 578 ~~~kl~Dfg~~~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~slG~~l~el~tg---------- 637 (707)
+.+||+|||++......... .....||+.|+|||.+.+. .++.++||||||+++|||++|
T Consensus 184 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~ 263 (342)
T 1b6c_B 184 GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDY 263 (342)
T ss_dssp SCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCC
T ss_pred CCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccccc
Confidence 99999999999876544321 2345789999999998765 234689999999999999999
Q ss_pred CCCCCcccccccccchhhhhhhhh----cCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 638 KHPRDFISSISSSSSNLEIALNEM----LDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 638 ~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
+.||....... .......... ..+..+... ...+.+..+.+++.+||+.||++|||+.++++.|+
T Consensus 264 ~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 332 (342)
T 1b6c_B 264 QLPYYDLVPSD---PSVEEMRKVVCEQKLRPNIPNRW-QSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 332 (342)
T ss_dssp CCTTTTTSCSS---CCHHHHHHHHTTSCCCCCCCGGG-GTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHH
T ss_pred ccCccccCcCc---ccHHHHHHHHHHHHhCCCCcccc-cchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 67775332211 1112222222 222222111 12356677999999999999999999999999875
No 178
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.8e-39 Score=328.10 Aligned_cols=252 Identities=25% Similarity=0.378 Sum_probs=199.0
Q ss_pred CCCCCceeeecCCeeEEEEEcC-C---CcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCce-e
Q 038671 437 DFDDEHCIGKGGQGSVYKAELP-S---GEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHS-F 511 (707)
Q Consensus 437 ~~~~~~~lg~G~~g~vy~~~~~-~---~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~-~ 511 (707)
.|+..+.||+|+||.||+|... + +..+|+|++... ......+.+.+|+.++++++||||+++++++.+.+.. +
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 99 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI--TEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPH 99 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTC--CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeecccc--ccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcE
Confidence 4566789999999999999642 2 337999998753 2334567889999999999999999999999766654 9
Q ss_pred EEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceec
Q 038671 512 IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFL 591 (707)
Q Consensus 512 lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~ 591 (707)
++|||+.+++|.+++... ...+++..++.++.|++.||+|||+. |++||||||+||+++.++.+||+|||++...
T Consensus 100 ~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 174 (298)
T 3pls_A 100 VLLPYMCHGDLLQFIRSP--QRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDI 174 (298)
T ss_dssp EEECCCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTT
T ss_pred EEEecccCCCHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccc
Confidence 999999999999999653 34689999999999999999999999 9999999999999999999999999999765
Q ss_pred CCCC----CCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCC-CCcccccccccchhhhhhhhhcCCCC
Q 038671 592 KPDS----SNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP-RDFISSISSSSSNLEIALNEMLDPRL 666 (707)
Q Consensus 592 ~~~~----~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (707)
.... .......+++.|+|||.+.+..++.++||||||+++|+|++|..| |..... ........... ..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~-----~~~~~~~~~~~--~~ 247 (298)
T 3pls_A 175 LDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP-----FDLTHFLAQGR--RL 247 (298)
T ss_dssp TTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG-----GGHHHHHHTTC--CC
T ss_pred cCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH-----HHHHHHhhcCC--CC
Confidence 4321 223345678899999999999999999999999999999996555 432111 11111111111 12
Q ss_pred CCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 667 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
+.+. ..+.++.+++.+||+.||.+|||+.++++.|+
T Consensus 248 ~~~~----~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~ 283 (298)
T 3pls_A 248 PQPE----YCPDSLYQVMQQCWEADPAVRPTFRVLVGEVE 283 (298)
T ss_dssp CCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCc----cchHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 2221 12345889999999999999999999999875
No 179
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.8e-39 Score=330.89 Aligned_cols=259 Identities=19% Similarity=0.270 Sum_probs=198.6
Q ss_pred HHhcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeee-ecCCce
Q 038671 433 RVTNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFC-SHARHS 510 (707)
Q Consensus 433 ~~~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~-~~~~~~ 510 (707)
.+.++|++.+.||+|+||.||+|+ ..+++.||+|++..... .+.+.+|+++++.++|++++..++++ ...+..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYN 80 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC--------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEE
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc-----chHHHHHHHHHHHhcCCCCCCeeeeecCCCCce
Confidence 456789999999999999999996 46789999998654322 23477899999999887766666555 667788
Q ss_pred eEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeee---cCCCCeEEecccc
Q 038671 511 FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLL---DLENEAHVSDFGT 587 (707)
Q Consensus 511 ~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~---~~~~~~kl~Dfg~ 587 (707)
++||||+ +++|.+++... ...+++..++.++.||+.||+|||++ ||+||||||+||++ +.++.+||+|||+
T Consensus 81 ~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~ 154 (296)
T 4hgt_A 81 VMVMELL-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGL 154 (296)
T ss_dssp EEEEECC-CCBHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTT
T ss_pred EEEEEcc-CCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCcc
Confidence 9999999 99999998632 34589999999999999999999999 99999999999999 7889999999999
Q ss_pred ceecCCCCC-------CccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhh
Q 038671 588 AKFLKPDSS-------NWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNE 660 (707)
Q Consensus 588 ~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 660 (707)
+........ ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||......... .........
T Consensus 155 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~ 233 (296)
T 4hgt_A 155 AKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR-QKYERISEK 233 (296)
T ss_dssp CEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS-SHHHHHHHH
T ss_pred ceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhh-hhhhhhhcc
Confidence 987654432 223457899999999999999999999999999999999999999754332211 111111111
Q ss_pred hcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 661 MLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
....... ......+.++.+++.+||+.||++||+++++++.|+
T Consensus 234 ~~~~~~~---~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (296)
T 4hgt_A 234 KMSTPIE---VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR 276 (296)
T ss_dssp HHHSCHH---HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHH
T ss_pred cccchhh---hhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHH
Confidence 1110000 000112356899999999999999999999999874
No 180
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.8e-39 Score=365.03 Aligned_cols=347 Identities=21% Similarity=0.301 Sum_probs=304.4
Q ss_pred CCCCCceeeccCCeeeec-----------------CCcccc--CCCCCCeEECCCCccccccCcCccCCCCCcEEEcccC
Q 038671 1 NLSNLAFLYLYNNSFSGS-----------------IPSEIG--RLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDN 61 (707)
Q Consensus 1 nl~~l~~L~l~~n~i~~~-----------------~~~~~~--~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n 61 (707)
++++|++|+|++|.+++. +|..++ ++++|++|+|++|++.+.+|..|.++++|++|+|++|
T Consensus 204 ~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n 283 (636)
T 4eco_A 204 RLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACN 283 (636)
T ss_dssp GCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTC
T ss_pred cccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCC
Confidence 478999999999999985 899999 9999999999999999999999999999999999999
Q ss_pred c-Ccc-cCCccccCC------CCCCeeecccccccccCC--CCCCCCCccEEEeccCccccccCccccCCCCCcEEEccc
Q 038671 62 A-LSG-AIPKEYGNL------VKLTLLTLENNQLRGPIP--NLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSH 131 (707)
Q Consensus 62 ~-i~~-~~~~~~~~l------~~L~~L~l~~n~i~~~~~--~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~ 131 (707)
+ +++ .+|..++++ ++|++|++++|+++.++. .+..+++|+.|++++|++++..+ .|..+++|++|+|++
T Consensus 284 ~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~ 362 (636)
T 4eco_A 284 RGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAY 362 (636)
T ss_dssp TTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCS
T ss_pred CCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCC
Confidence 8 987 788888877 999999999999998777 79999999999999999995555 899999999999999
Q ss_pred ccccccCCCCCCCCCC-CcEEEcCCCccCCCCchhhhCCC--CCCEEeCCCCCCCCCCChhhh-------CCCCCcEEEe
Q 038671 132 NYFYGEISSDWGRCPK-LGTLDFSSNNITGSMPAEIIHSS--QLKVLDLSSNHIVGEMPSKLG-------KLSSLIKLIL 201 (707)
Q Consensus 132 n~i~~~~~~~~~~~~~-L~~L~L~~n~i~~~~~~~~~~~~--~L~~L~l~~n~l~~~~~~~~~-------~l~~L~~L~l 201 (707)
|.++ ..+..+..+++ |++|++++|.++ ..+..+.... +|+.|++++|.+++..|..+. .+++|++|++
T Consensus 363 N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~L 440 (636)
T 4eco_A 363 NQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINL 440 (636)
T ss_dssp SEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEEC
T ss_pred Cccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEEC
Confidence 9999 56667999999 999999999999 6677776654 899999999999988888888 7889999999
Q ss_pred cCCccccCCccccCCCCcccEEEccCCccCCCCCccccCcc-------cCceEeeecccccccCchhhh--hcccCCeee
Q 038671 202 NSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLV-------KLHYLNLSNNQFIKKIPVELE--KLIHLSELD 272 (707)
Q Consensus 202 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~-------~L~~L~l~~n~l~~~~~~~~~--~l~~L~~L~ 272 (707)
++|.++...+..+..+++|++|+|++|.++.+.+..+.... +|+.|+|++|+++ ..|..+. .+++|+.|+
T Consensus 441 s~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~ 519 (636)
T 4eco_A 441 SNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGID 519 (636)
T ss_dssp CSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEE
T ss_pred cCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEE
Confidence 99999965555667799999999999999955555554433 9999999999998 5566665 899999999
Q ss_pred ecCccCCCCCCcccccccccceEec------cccccCCchhHhhccCCCceeEeeccCcccccCCCccccccCchhhccc
Q 038671 273 LSHNFLGEEMPSQICNMQSLEKLNL------SHNNLSGFIPSCFEELHGLSYIDISYNELHGSIPNSTAFRDAPMEALQG 346 (707)
Q Consensus 273 l~~n~l~~~~~~~~~~~~~L~~L~l------~~n~i~~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~ 346 (707)
|++|.+++ +|..+..+++|+.|++ ++|++.+..|..+..+++|+.|++++|++ +.+|... .+......+.+
T Consensus 520 Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~-~~~L~~L~Ls~ 596 (636)
T 4eco_A 520 LSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKI-TPNISVLDIKD 596 (636)
T ss_dssp CCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCC-CTTCCEEECCS
T ss_pred CCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhH-hCcCCEEECcC
Confidence 99999987 8889999999999999 56888889999999999999999999999 4555432 25677777888
Q ss_pred CcCcCCCC
Q 038671 347 NKGLCGDI 354 (707)
Q Consensus 347 ~~~~c~~~ 354 (707)
|+..|.+.
T Consensus 597 N~l~~~~~ 604 (636)
T 4eco_A 597 NPNISIDL 604 (636)
T ss_dssp CTTCEEEC
T ss_pred CCCccccH
Confidence 88877553
No 181
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=4.5e-40 Score=340.67 Aligned_cols=262 Identities=23% Similarity=0.383 Sum_probs=199.9
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIV 513 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 513 (707)
.++|++.+.||+|+||.||+|+. .+|+.||+|++..... .....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDD-DKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCC-chHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 36799999999999999999965 5689999999865433 233456688999999999999999999999999999999
Q ss_pred EeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCC
Q 038671 514 YEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKP 593 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~ 593 (707)
|||++++++.++.... ..+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++.....
T Consensus 103 ~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 176 (331)
T 4aaa_A 103 FEFVDHTILDDLELFP---NGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176 (331)
T ss_dssp EECCSEEHHHHHHHST---TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred EecCCcchHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecC
Confidence 9999999999887543 3589999999999999999999999 999999999999999999999999999987665
Q ss_pred CCCCccccccccCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCcccccccccchh----------hh------
Q 038671 594 DSSNWAELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNL----------EI------ 656 (707)
Q Consensus 594 ~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~----------~~------ 656 (707)
.........|++.|+|||.+.+. .++.++||||||+++|+|++|+.||............. ..
T Consensus 177 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (331)
T 4aaa_A 177 PGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNP 256 (331)
T ss_dssp -------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCG
T ss_pred CccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcc
Confidence 54445566899999999998875 68999999999999999999999996433211000000 00
Q ss_pred hhhhhcCCCCCCCCc---chHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 657 ALNEMLDPRLPTPSH---NVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 657 ~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
.......+....... ..+..+..+.+++.+||+.||++|||+.|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 257 VFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp GGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000011111111100 01123456899999999999999999999876
No 182
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.2e-39 Score=331.11 Aligned_cols=247 Identities=21% Similarity=0.392 Sum_probs=198.4
Q ss_pred hcCCCCCceeeecCCeeEEEEEcC-CC-------cEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeec
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAELP-SG-------EIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSH 506 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 506 (707)
.++|++.+.||+|+||.||+|... ++ +.||+|++... .....+.+.+|++++++++||||+++++++..
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 83 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA---HRNYSESFFEAASMMSKLSHKHLVLNYGVCVC 83 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG---GGGGHHHHHHHHHHHHTSCCTTBCCEEEEECC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc---cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe
Confidence 367899999999999999999543 33 57999998542 23345779999999999999999999999999
Q ss_pred CCceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCC-------
Q 038671 507 ARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENE------- 579 (707)
Q Consensus 507 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~------- 579 (707)
++..++||||+++++|.+++... ...+++..++.++.||+.||+|||++ +|+||||||+||+++.++.
T Consensus 84 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~ 158 (289)
T 4fvq_A 84 GDENILVQEFVKFGSLDTYLKKN--KNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPP 158 (289)
T ss_dssp TTCCEEEEECCTTCBHHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCC
T ss_pred CCCCEEEEECCCCCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccc
Confidence 99999999999999999999653 23489999999999999999999999 9999999999999998887
Q ss_pred -eEEeccccceecCCCCCCccccccccCCCCcccccc-CCCCccchhHHHHHHHHHHHhCC-CCCCcccccccccchhhh
Q 038671 580 -AHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGK-HPRDFISSISSSSSNLEI 656 (707)
Q Consensus 580 -~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~-~p~~~~~~~~~~~~~~~~ 656 (707)
+||+|||.+..... .....+++.|+|||.+.+ ..++.++||||||+++|||++|. +||..... ...
T Consensus 159 ~~kl~Dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~-------~~~ 227 (289)
T 4fvq_A 159 FIKLSDPGISITVLP----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS-------QRK 227 (289)
T ss_dssp EEEECCCCSCTTTSC----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-------HHH
T ss_pred eeeeccCcccccccC----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccch-------HHH
Confidence 99999999865432 234568899999999887 66899999999999999999955 45432111 111
Q ss_pred hhhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 657 ALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
..........+... +.++.+++.+||+.||++|||++++++.|+
T Consensus 228 ~~~~~~~~~~~~~~------~~~l~~li~~~l~~dp~~Rps~~~ll~~l~ 271 (289)
T 4fvq_A 228 LQFYEDRHQLPAPK------AAELANLINNCMDYEPDHRPSFRAIIRDLN 271 (289)
T ss_dssp HHHHHTTCCCCCCS------SCTTHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HHHhhccCCCCCCC------CHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 11111122222211 234789999999999999999999999875
No 183
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2.1e-39 Score=335.17 Aligned_cols=253 Identities=24% Similarity=0.394 Sum_probs=200.3
Q ss_pred cCCCCCceeeecCCeeEEEEEc-CCCcEE--EEEecCCCCCchhhhHHHHHHHHHHHhcC-CCCceeeeeeeeecCCcee
Q 038671 436 NDFDDEHCIGKGGQGSVYKAEL-PSGEIV--AVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGFCSHARHSF 511 (707)
Q Consensus 436 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~v--avK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 511 (707)
++|++.+.||+|+||.||+|+. .+++.+ ++|++.... .....+.+.+|+++++++ +||||+++++++.+.+..+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 102 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 102 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc--chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceE
Confidence 5799999999999999999964 456644 899886532 223446688999999999 8999999999999999999
Q ss_pred EEEeeeccCcHHHHHhccc-------------ccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCC
Q 038671 512 IVYEYLEMGSLAMILSNDA-------------AAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLEN 578 (707)
Q Consensus 512 lv~e~~~~~~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~ 578 (707)
+||||+++++|.+++.... ....+++..++.++.||+.||+|||++ ||+||||||+||+++.++
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~ 179 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENY 179 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGG
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCC
Confidence 9999999999999997543 234689999999999999999999999 999999999999999999
Q ss_pred CeEEeccccceecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchhhhh
Q 038671 579 EAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNLEIA 657 (707)
Q Consensus 579 ~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~ 657 (707)
.+||+|||++...... .......+++.|+|||.+.+..++.++||||||+++|+|++ |+.||..... ...
T Consensus 180 ~~kL~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~--------~~~ 250 (327)
T 1fvr_A 180 VAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--------AEL 250 (327)
T ss_dssp CEEECCTTCEESSCEE-CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHH
T ss_pred eEEEcccCcCcccccc-ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH--------HHH
Confidence 9999999999743322 12233456889999999998889999999999999999998 9999964221 111
Q ss_pred hhhhcCC-CCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 658 LNEMLDP-RLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 658 ~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
...+... ....+. ..+.++.+++.+||+.||.+||+++++++.|+
T Consensus 251 ~~~~~~~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 296 (327)
T 1fvr_A 251 YEKLPQGYRLEKPL----NCDDEVYDLMRQCWREKPYERPSFAQILVSLN 296 (327)
T ss_dssp HHHGGGTCCCCCCT----TBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHhhcCCCCCCCC----CCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1111111 111111 22345889999999999999999999998874
No 184
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=2.5e-39 Score=330.25 Aligned_cols=257 Identities=21% Similarity=0.333 Sum_probs=206.6
Q ss_pred HHHhcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCc------hhhhHHHHHHHHHHHhcCC-CCceeeeeee
Q 038671 432 IRVTNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPS------EMASQQEFLNEVKTLTGIR-HRNIVKFYGF 503 (707)
Q Consensus 432 ~~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~~~~e~~~l~~l~-h~niv~~~~~ 503 (707)
..+.++|++.+.||+|+||.||+|.. .+|+.||+|++...... .....+.+.+|+++++++. ||||++++++
T Consensus 13 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 92 (298)
T 1phk_A 13 HGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDT 92 (298)
T ss_dssp --CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred cchhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeee
Confidence 34567899999999999999999965 57899999998654311 1223456889999999996 9999999999
Q ss_pred eecCCceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEe
Q 038671 504 CSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVS 583 (707)
Q Consensus 504 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~ 583 (707)
+...+..++||||+++++|.+++... ..+++..++.++.||+.||+|||+. |++||||+|+||+++.++.+||+
T Consensus 93 ~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~ 166 (298)
T 1phk_A 93 YETNTFFFLVFDLMKKGELFDYLTEK---VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLT 166 (298)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEEC
T ss_pred eccCCeEEEEEeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEe
Confidence 99999999999999999999999643 4589999999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCCccccccccCCCCccccc------cCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhh
Q 038671 584 DFGTAKFLKPDSSNWAELAGTYGYVAPELAY------TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIA 657 (707)
Q Consensus 584 Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~------~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~ 657 (707)
|||.+....... ......+++.|+|||.+. ...++.++||||||+++|+|++|+.||..... ...
T Consensus 167 dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--------~~~ 237 (298)
T 1phk_A 167 DFGFSCQLDPGE-KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ--------MLM 237 (298)
T ss_dssp CCTTCEECCTTC-CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHH
T ss_pred cccchhhcCCCc-ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH--------HHH
Confidence 999998765432 334567899999999875 44678899999999999999999999863221 111
Q ss_pred hhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 658 LNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
...+.......+.......+.++.+++.+||+.||++||++.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 238 LRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 1112222222221222344566999999999999999999999986
No 185
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=2.2e-39 Score=334.98 Aligned_cols=256 Identities=24% Similarity=0.373 Sum_probs=202.1
Q ss_pred hcCCCCCceeeecCCeeEEEEEc------CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCC
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL------PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHAR 508 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 508 (707)
.++|++.+.||+|+||.||+|+. .+++.||+|++.... .......+.+|+.++++++||||+++++++...+
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 106 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC--SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 106 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc--chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC
Confidence 46899999999999999999963 357789999986542 2334567899999999999999999999999999
Q ss_pred ceeEEEeeeccCcHHHHHhcccc----cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCC---CCeE
Q 038671 509 HSFIVYEYLEMGSLAMILSNDAA----AKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLE---NEAH 581 (707)
Q Consensus 509 ~~~lv~e~~~~~~L~~~l~~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~---~~~k 581 (707)
..++||||+++++|.+++..... ...+++..++.++.|++.||+|||+. |++||||||+||+++.+ ..+|
T Consensus 107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~k 183 (327)
T 2yfx_A 107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAK 183 (327)
T ss_dssp SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEE
Confidence 99999999999999999975432 13488999999999999999999999 99999999999999844 4699
Q ss_pred EeccccceecCCCCC--CccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchhhhhh
Q 038671 582 VSDFGTAKFLKPDSS--NWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNLEIAL 658 (707)
Q Consensus 582 l~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~ 658 (707)
|+|||++........ ......+++.|+|||.+.+..++.++||||||+++|+|++ |+.||..... ....
T Consensus 184 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--------~~~~ 255 (327)
T 2yfx_A 184 IGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--------QEVL 255 (327)
T ss_dssp ECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--------HHHH
T ss_pred ECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH--------HHHH
Confidence 999999976543321 2234567889999999998889999999999999999998 9999863221 1112
Q ss_pred hhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 659 NEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
..+.....+... ...+..+.+++.+||+.||.+||++.++++.|+
T Consensus 256 ~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~ 300 (327)
T 2yfx_A 256 EFVTSGGRMDPP---KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300 (327)
T ss_dssp HHHHTTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHhcCCCCCCC---CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 222222111111 122345889999999999999999999999875
No 186
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=2.1e-39 Score=329.30 Aligned_cols=249 Identities=22% Similarity=0.321 Sum_probs=200.8
Q ss_pred HhcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcC-CCCceeeeeeeeecCCcee
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGFCSHARHSF 511 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 511 (707)
..++|++.+.||+|+||.||+|.. .+++.||+|++....... ....++.+|+..+..+ +||||+++++++.+++..+
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~ 87 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGS-VDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHML 87 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTS-HHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEeccccccc-HHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEE
Confidence 457799999999999999999965 479999999987653333 3456788899999999 8999999999999999999
Q ss_pred EEEeeeccCcHHHHHhcccc-cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCC-------------
Q 038671 512 IVYEYLEMGSLAMILSNDAA-AKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLE------------- 577 (707)
Q Consensus 512 lv~e~~~~~~L~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~------------- 577 (707)
+||||+++++|.+++..... ...+++..++.++.||+.||+|||++ ||+||||||+||+++.+
T Consensus 88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~ 164 (289)
T 1x8b_A 88 IQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDED 164 (289)
T ss_dssp EEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC---------------
T ss_pred EEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccc
Confidence 99999999999999965432 24589999999999999999999999 99999999999999844
Q ss_pred ------CCeEEeccccceecCCCCCCccccccccCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCcccccccc
Q 038671 578 ------NEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSISSS 650 (707)
Q Consensus 578 ------~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~ 650 (707)
..+||+|||.+....... ...|++.|+|||.+.+. .++.++||||||+++|+|++|.+|+...
T Consensus 165 ~~~~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~------ 234 (289)
T 1x8b_A 165 DWASNKVMFKIGDLGHVTRISSPQ----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG------ 234 (289)
T ss_dssp -----CCCEEECCCTTCEETTCSC----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS------
T ss_pred cccCCceEEEEcccccccccCCcc----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch------
Confidence 479999999998765432 24689999999998765 5668999999999999999999876421
Q ss_pred cchhhhhhhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 651 SSNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
.... .......+.... ..+.++.+++.+||+.||++|||+.|+++.
T Consensus 235 -~~~~----~~~~~~~~~~~~---~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 235 -DQWH----EIRQGRLPRIPQ---VLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp -HHHH----HHHTTCCCCCSS---CCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred -hHHH----HHHcCCCCCCCc---ccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 1111 111222222111 123458899999999999999999999864
No 187
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.2e-40 Score=351.04 Aligned_cols=245 Identities=15% Similarity=0.168 Sum_probs=190.7
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHH---HHHhcCCCCceeeee-------ee
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEV---KTLTGIRHRNIVKFY-------GF 503 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~---~~l~~l~h~niv~~~-------~~ 503 (707)
.++|++.+.||+|+||.||+|+. .+|+.||||++...........+.+.+|+ +.+++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 36788899999999999999975 56999999998754333344567889999 556666899999998 55
Q ss_pred eecCC-----------------ceeEEEeeeccCcHHHHHhcccc----cCCCChHHHHHHHHHHHHHHHHHHhCCCCCe
Q 038671 504 CSHAR-----------------HSFIVYEYLEMGSLAMILSNDAA----AKDLGWTKRMNVIKGVVDALSYMHNDCFPPI 562 (707)
Q Consensus 504 ~~~~~-----------------~~~lv~e~~~~~~L~~~l~~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 562 (707)
+..++ ..++||||+ +|+|.+++..... ...+++..++.++.||+.||+|||++ ||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 55443 278999999 6899999965321 11234588889999999999999999 99
Q ss_pred EecCCCCCCeeecCCCCeEEeccccceecCCCCCCccccccccCCCCccccccC-----------CCCccchhHHHHHHH
Q 038671 563 VHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTM-----------KVTEKCDVYSFGVLA 631 (707)
Q Consensus 563 vH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-----------~~~~~~Dv~slG~~l 631 (707)
+||||||+||+++.++.+||+|||+++... .......| +.|+|||++.+. .++.++||||||+++
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~---~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il 303 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDG---ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVI 303 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETT---CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecC---CcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHH
Confidence 999999999999999999999999998633 23345567 999999999887 799999999999999
Q ss_pred HHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 632 LEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 632 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
|||++|+.||....... ....... ..+ ..+.++.+++.+||+.||++||++.|+++
T Consensus 304 ~elltg~~Pf~~~~~~~--------~~~~~~~-~~~-------~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 304 YWIWCADLPITKDAALG--------GSEWIFR-SCK-------NIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHSSCCC------C--------CSGGGGS-SCC-------CCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHCCCCCccccccc--------chhhhhh-hcc-------CCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 99999999996432211 1111111 111 12345889999999999999999999986
No 188
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-39 Score=339.56 Aligned_cols=258 Identities=21% Similarity=0.307 Sum_probs=195.8
Q ss_pred HhcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCC----
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHAR---- 508 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~---- 508 (707)
..++|++.+.||+|+||.||+|.. .+|+.||+|++...... ....+++.+|+++++.++||||+++++++...+
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~ 101 (367)
T 1cm8_A 23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQS-ELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDD 101 (367)
T ss_dssp CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSS-HHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTT
T ss_pred ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccC-HHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCcccc
Confidence 357899999999999999999954 67999999998765433 334567899999999999999999999997653
Q ss_pred --ceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccc
Q 038671 509 --HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFG 586 (707)
Q Consensus 509 --~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg 586 (707)
..|+||||+ +++|.+++.. ..+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg 173 (367)
T 1cm8_A 102 FTDFYLVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFG 173 (367)
T ss_dssp CCCCEEEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred CceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeee
Confidence 469999999 8899999864 3589999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCccccccccCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCcccccccccch------------
Q 038671 587 TAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSN------------ 653 (707)
Q Consensus 587 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~------------ 653 (707)
+++..... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||............
T Consensus 174 ~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~ 250 (367)
T 1cm8_A 174 LARQADSE---MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFV 250 (367)
T ss_dssp TCEECCSS---CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred cccccccc---cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 99875432 344678999999999877 67899999999999999999999999743221100000
Q ss_pred -------hhhhhhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 654 -------LEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 654 -------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
.......................+..+.+++.+||..||++|||++|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 251 QRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 00000000000000000011223456889999999999999999999986
No 189
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=3.2e-39 Score=329.10 Aligned_cols=258 Identities=18% Similarity=0.265 Sum_probs=202.0
Q ss_pred HhcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeee-ecCCcee
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFC-SHARHSF 511 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~-~~~~~~~ 511 (707)
..++|++.+.||+|+||.||+|+ ..+|+.||+|++..... .+.+.+|+.+++.++|++++..+.++ ...+..+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 81 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS-----CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEE
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc-----hhHHHHHHHHHHHhhcCCCCCccccccCCCCceE
Confidence 35789999999999999999996 46899999999865432 23578899999999987766655554 6677889
Q ss_pred EEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeee---cCCCCeEEeccccc
Q 038671 512 IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLL---DLENEAHVSDFGTA 588 (707)
Q Consensus 512 lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~---~~~~~~kl~Dfg~~ 588 (707)
+||||+ +++|.+++... ...+++..++.++.|++.||+|||++ ||+||||||+||++ +.++.+||+|||.+
T Consensus 82 lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 155 (296)
T 3uzp_A 82 MVMELL-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155 (296)
T ss_dssp EEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTC
T ss_pred EEEEec-CCCHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCc
Confidence 999999 99999999632 34689999999999999999999999 99999999999999 47889999999999
Q ss_pred eecCCCCC-------CccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhh
Q 038671 589 KFLKPDSS-------NWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEM 661 (707)
Q Consensus 589 ~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 661 (707)
........ ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||........ ...........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~ 234 (296)
T 3uzp_A 156 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK-RQKYERISEKK 234 (296)
T ss_dssp EECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSS-SSHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhh-hhhhhhhcccc
Confidence 87665432 12445799999999999998999999999999999999999999975332111 11111111111
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 662 LDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
.....+ ......+.++.+++.+||+.||++||+++++++.|+
T Consensus 235 ~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 276 (296)
T 3uzp_A 235 MSTPIE---VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR 276 (296)
T ss_dssp HHSCHH---HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHH
T ss_pred cCCchH---HHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHH
Confidence 110000 000122356899999999999999999999999875
No 190
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=5.5e-39 Score=330.25 Aligned_cols=252 Identities=28% Similarity=0.420 Sum_probs=201.6
Q ss_pred HHhcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCcee
Q 038671 433 RVTNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSF 511 (707)
Q Consensus 433 ~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 511 (707)
...++|++.+.||+|+||.||+|.. .+|+.||+|++.... ..+.+.+|+.++++++||||+++++++...+..+
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 100 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-----DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLW 100 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-----CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-----HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEE
Confidence 4567899999999999999999965 469999999986532 2356889999999999999999999999999999
Q ss_pred EEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceec
Q 038671 512 IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFL 591 (707)
Q Consensus 512 lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~ 591 (707)
+||||+++++|.+++... ...+++..++.++.|++.||+|||+. |++||||||+||+++.++.+||+|||.+...
T Consensus 101 lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 175 (314)
T 3com_A 101 IVMEYCGAGSVSDIIRLR--NKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQL 175 (314)
T ss_dssp EEEECCTTEEHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEeecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhh
Confidence 999999999999998532 34689999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCc
Q 038671 592 KPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSH 671 (707)
Q Consensus 592 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (707)
...........|++.|+|||.+.+..++.++||||||+++|+|++|+.||...... ...........+....
T Consensus 176 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~--- 247 (314)
T 3com_A 176 TDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM-----RAIFMIPTNPPPTFRK--- 247 (314)
T ss_dssp BTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHHHHHHSCCCCCSS---
T ss_pred hhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHhcCCCcccCC---
Confidence 65544445567899999999999988999999999999999999999999643211 0011111111111111
Q ss_pred chHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 672 NVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 672 ~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
....+..+.+++.+||+.||.+||++.++++
T Consensus 248 -~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 248 -PELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp -GGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred -cccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 1223456899999999999999999999976
No 191
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.9e-39 Score=327.37 Aligned_cols=248 Identities=29% Similarity=0.428 Sum_probs=194.6
Q ss_pred hcCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeec-CCceeEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSH-ARHSFIV 513 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv 513 (707)
.++|++.+.||+|+||.||+++.. |+.||+|++.... ..+.+.+|++++++++||||+++++++.+ .+..++|
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv 93 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 93 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC-------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEE
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh-----HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEE
Confidence 467999999999999999999774 8899999987532 34678899999999999999999998754 4578999
Q ss_pred EeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCC
Q 038671 514 YEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKP 593 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~ 593 (707)
|||+++++|.+++.... ...+++..++.++.|++.||+|||++ |++||||||+||+++.++.+||+|||++.....
T Consensus 94 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 169 (278)
T 1byg_A 94 TEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 169 (278)
T ss_dssp ECCCTTEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred EecCCCCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccc
Confidence 99999999999996432 23478999999999999999999999 999999999999999999999999999976543
Q ss_pred CCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchhhhhhhhhcCCCCCCCCcc
Q 038671 594 DSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHN 672 (707)
Q Consensus 594 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (707)
. .....+++.|+|||.+.+..++.++||||||+++|+|++ |+.||..... ............ ...+
T Consensus 170 ~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~-----~~~~~~~~~~~~--~~~~--- 236 (278)
T 1byg_A 170 T---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-----KDVVPRVEKGYK--MDAP--- 236 (278)
T ss_dssp ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG-----GGHHHHHTTTCC--CCCC---
T ss_pred c---ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHhcCCC--CCCc---
Confidence 2 223467889999999998889999999999999999998 9999864321 111111111111 1111
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 673 VQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 673 ~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
...+..+.+++.+||+.||.+||++.++++.|+
T Consensus 237 -~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 269 (278)
T 1byg_A 237 -DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLE 269 (278)
T ss_dssp -TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -ccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHH
Confidence 123456899999999999999999999999875
No 192
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=338.07 Aligned_cols=261 Identities=27% Similarity=0.391 Sum_probs=196.4
Q ss_pred hcCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHH--HHHHhcCCCCceeeeeeeee-----cC
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNE--VKTLTGIRHRNIVKFYGFCS-----HA 507 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e--~~~l~~l~h~niv~~~~~~~-----~~ 507 (707)
.++|++.+.||+|+||.||+|+. +++.||||++... ....+..| +..+..++||||+++++++. ..
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 84 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA------NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGR 84 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSC
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc------chhhHHHHHHHHHHHhccCcchhhheecccccccCCC
Confidence 46799999999999999999976 6899999998532 12333344 44455689999999998553 23
Q ss_pred CceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCC------CCeEecCCCCCCeeecCCCCeE
Q 038671 508 RHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCF------PPIVHRDISSKNVLLDLENEAH 581 (707)
Q Consensus 508 ~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~------~~ivH~dlk~~Nil~~~~~~~k 581 (707)
...++||||+++|+|.+++... ..++..++.++.||++||+|||+.+. +||+||||||+||+++.++.+|
T Consensus 85 ~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 160 (336)
T 3g2f_A 85 MEYLLVMEYYPNGSLXKYLSLH----TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCV 160 (336)
T ss_dssp EEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEE
T ss_pred ceEEEEEecCCCCcHHHHHhhc----ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEE
Confidence 3678999999999999999643 34889999999999999999998732 2899999999999999999999
Q ss_pred EeccccceecCCCC--------CCccccccccCCCCcccccc-------CCCCccchhHHHHHHHHHHHhCCCCCCcccc
Q 038671 582 VSDFGTAKFLKPDS--------SNWAELAGTYGYVAPELAYT-------MKVTEKCDVYSFGVLALEVIKGKHPRDFISS 646 (707)
Q Consensus 582 l~Dfg~~~~~~~~~--------~~~~~~~g~~~y~aPE~~~~-------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~ 646 (707)
|+|||++....... .......||+.|+|||++.+ ..++.++||||||+++|||++|..||.....
T Consensus 161 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~ 240 (336)
T 3g2f_A 161 ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGES 240 (336)
T ss_dssp ECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSC
T ss_pred EeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccc
Confidence 99999998765321 11234579999999999876 4567789999999999999999877643221
Q ss_pred cccccch----------h----hhhhhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 647 ISSSSSN----------L----EIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 647 ~~~~~~~----------~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
....... . .........+.++.........+.++.+++.+||+.||++|||++|+++.|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~ 314 (336)
T 3g2f_A 241 VPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMA 314 (336)
T ss_dssp CCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred hhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHH
Confidence 1110000 0 0111222233444433334456778999999999999999999999999875
No 193
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=7.1e-40 Score=344.62 Aligned_cols=256 Identities=9% Similarity=0.022 Sum_probs=184.8
Q ss_pred cCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcC--CCCceeeee-------eeee
Q 038671 436 NDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI--RHRNIVKFY-------GFCS 505 (707)
Q Consensus 436 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~~~-------~~~~ 505 (707)
.+|++.+.||+|+||.||+|.. .+|+.||+|++...........+.+.+|+.++..+ +|||+++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 4588999999999999999964 57999999999876554555667788885444444 699988755 4443
Q ss_pred cC-----------------CceeEEEeeeccCcHHHHHhcccccCCCChHHH------HHHHHHHHHHHHHHHhCCCCCe
Q 038671 506 HA-----------------RHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKR------MNVIKGVVDALSYMHNDCFPPI 562 (707)
Q Consensus 506 ~~-----------------~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~------~~i~~~i~~~l~~LH~~~~~~i 562 (707)
.. ...++||||++ ++|.+++.... ..+++..+ +.++.||+.||+|||++ ||
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~i 215 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD--FVYVFRGDEGILALHILTAQLIRLAANLQSK---GL 215 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH--HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc--cccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CC
Confidence 32 33799999999 89999997542 23566666 78889999999999999 99
Q ss_pred EecCCCCCCeeecCCCCeEEeccccceecCCCCCCccccccccCCCCcccccc--CCCCccchhHHHHHHHHHHHhCCCC
Q 038671 563 VHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHP 640 (707)
Q Consensus 563 vH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~~p 640 (707)
+||||||+||+++.++.+||+|||+++..... .....+++.|+|||.+.+ ..++.++||||||+++|||++|+.|
T Consensus 216 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~P 292 (371)
T 3q60_A 216 VHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR---GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP 292 (371)
T ss_dssp EETTCSGGGEEECTTSCEEECCGGGEEETTCE---EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCS
T ss_pred ccCcCCHHHEEECCCCCEEEEecceeeecCCC---ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999875422 224567799999999987 6789999999999999999999999
Q ss_pred CCcccccccccchhhhhhhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 641 RDFISSISSSSSNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
|............ ..............+ .....+..+.+++.+||+.||++|||+.++++
T Consensus 293 f~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 293 FGLVTPGIKGSWK-RPSLRVPGTDSLAFG--SCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TTBCCTTCTTCCC-BCCTTSCCCCSCCCT--TSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCcCcccccchh-hhhhhhccccccchh--hccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 9753221100000 000000011111111 11133456899999999999999999999875
No 194
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=3.4e-38 Score=354.97 Aligned_cols=344 Identities=22% Similarity=0.219 Sum_probs=201.6
Q ss_pred CCceeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeecc
Q 038671 4 NLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLE 83 (707)
Q Consensus 4 ~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~ 83 (707)
++++|+|++|.|++..|..|+++++|++|+|++|+++++.|++|.++++|++|+|++|.+++..|..|+++++|++|+++
T Consensus 34 ~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 113 (606)
T 3t6q_A 34 STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFI 113 (606)
T ss_dssp TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECT
T ss_pred cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeecc
Confidence 34555555555555555555555555555555555554445555555555555555555554545555555555555555
Q ss_pred ccccccc-CCCCCCCCCccEEEeccCccc------------------------cccCccccCCCCCc--EEEcccccccc
Q 038671 84 NNQLRGP-IPNLRNLTSLVRVRLNQNHLT------------------------GNISESFGIHPNLA--FIDLSHNYFYG 136 (707)
Q Consensus 84 ~n~i~~~-~~~l~~l~~L~~L~l~~n~l~------------------------~~~~~~~~~~~~L~--~L~L~~n~i~~ 136 (707)
+|.++.+ +..+..+++|++|++++|+++ .+.+..|..+++|+ .|++++|.++.
T Consensus 114 ~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~ 193 (606)
T 3t6q_A 114 QTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAG 193 (606)
T ss_dssp TSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCE
T ss_pred ccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCc
Confidence 5555443 223444445555555555444 44444444444444 44444444443
Q ss_pred cCCCCCCCC---------------------------------------------------CCCcEEEcCCCccCCCCchh
Q 038671 137 EISSDWGRC---------------------------------------------------PKLGTLDFSSNNITGSMPAE 165 (707)
Q Consensus 137 ~~~~~~~~~---------------------------------------------------~~L~~L~L~~n~i~~~~~~~ 165 (707)
+.+..|... .+|+.|++++|.+++..+..
T Consensus 194 ~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~ 273 (606)
T 3t6q_A 194 IEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNT 273 (606)
T ss_dssp ECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTT
T ss_pred cChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHH
Confidence 333222110 03444445555555445555
Q ss_pred hhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCC-CccccCcccC
Q 038671 166 IIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSI-PKSLGNLVKL 244 (707)
Q Consensus 166 ~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~-~~~l~~l~~L 244 (707)
|..+++|+.|++++|.++ .+|..+..+++|++|++++|.+++..+..+..+++|++|++++|.+.+.. +..+..+++|
T Consensus 274 ~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L 352 (606)
T 3t6q_A 274 FHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENL 352 (606)
T ss_dssp TTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTC
T ss_pred hccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcC
Confidence 667777888888888777 66667777778888888888777666667777777777777777766433 3446677777
Q ss_pred ceEeeecccccccC--chhhhhcccCCeeeecCccCCCCCCcccccccccceEeccccccCCchhH-hhccCCCceeEee
Q 038671 245 HYLNLSNNQFIKKI--PVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPS-CFEELHGLSYIDI 321 (707)
Q Consensus 245 ~~L~l~~n~l~~~~--~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~-~~~~~~~L~~l~l 321 (707)
++|++++|.+.+.. +..+..+++|++|++++|.+++..+..+..+++|+.|++++|++.+..+. .+..+++|+.|++
T Consensus 353 ~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l 432 (606)
T 3t6q_A 353 RELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNL 432 (606)
T ss_dssp CEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEEC
T ss_pred CEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEEC
Confidence 77777777776554 55667777777777777777666666677777777777777777655443 3666677777777
Q ss_pred ccCcccccCCC-ccccccCchhhcccCc
Q 038671 322 SYNELHGSIPN-STAFRDAPMEALQGNK 348 (707)
Q Consensus 322 ~~n~~~~~~~~-~~~~~~~~~~~~~~~~ 348 (707)
++|.+++..+. ...++......+.+|+
T Consensus 433 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 460 (606)
T 3t6q_A 433 SHSLLDISSEQLFDGLPALQHLNLQGNH 460 (606)
T ss_dssp TTCCCBTTCTTTTTTCTTCCEEECTTCB
T ss_pred CCCccCCcCHHHHhCCCCCCEEECCCCC
Confidence 77777665443 2233444444455554
No 195
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=6.3e-39 Score=328.40 Aligned_cols=254 Identities=20% Similarity=0.307 Sum_probs=198.7
Q ss_pred HhcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCch-hhhHHHHHHHHHHHhcCCCCceeeeeeee--ecCCc
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSE-MASQQEFLNEVKTLTGIRHRNIVKFYGFC--SHARH 509 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~--~~~~~ 509 (707)
..++|++.+.||+|+||.||++.. .+++.||+|++....... ....+.+.+|++++++++||||+++++++ .+.+.
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 457899999999999999999965 578999999986432111 22456799999999999999999999998 44568
Q ss_pred eeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccce
Q 038671 510 SFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAK 589 (707)
Q Consensus 510 ~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~ 589 (707)
.++||||+.++ +.+++.... ...+++..++.++.||+.||+|||++ |++||||||+||+++.++.+||+|||.+.
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~ 157 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSVP-EKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAE 157 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHST-TCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEehhccCC-HHHHHHhCc-ccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccc
Confidence 89999999877 666665432 35689999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCC--CCccccccccCCCCccccccCC--CCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCC
Q 038671 590 FLKPDS--SNWAELAGTYGYVAPELAYTMK--VTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPR 665 (707)
Q Consensus 590 ~~~~~~--~~~~~~~g~~~y~aPE~~~~~~--~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (707)
...... .......|++.|+|||...+.. ++.++||||||+++|+|++|+.||.... .......+....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~i~~~~ 229 (305)
T 2wtk_C 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN--------IYKLFENIGKGS 229 (305)
T ss_dssp ECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS--------HHHHHHHHHHCC
T ss_pred ccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch--------HHHHHHHHhcCC
Confidence 765332 2233457899999999987644 3779999999999999999999996322 112222222222
Q ss_pred CCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 666 LPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 666 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
...+.. .+..+.+++.+||+.||.+||+++|+++.
T Consensus 230 ~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 230 YAIPGD----CGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp CCCCSS----SCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred CCCCCc----cCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 222222 23458899999999999999999999863
No 196
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=4.5e-39 Score=326.79 Aligned_cols=250 Identities=22% Similarity=0.349 Sum_probs=199.5
Q ss_pred cCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeec----CCce
Q 038671 436 NDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSH----ARHS 510 (707)
Q Consensus 436 ~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~ 510 (707)
..|++.+.||+|+||.||+|. ..++..||+|++...... ....+.+.+|+.++++++||||+++++++.. ....
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 104 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT-KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI 104 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhC-HHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceE
Confidence 347788899999999999995 457889999998654322 3356778999999999999999999998865 4568
Q ss_pred eEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCC--eEecCCCCCCeeec-CCCCeEEecccc
Q 038671 511 FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPP--IVHRDISSKNVLLD-LENEAHVSDFGT 587 (707)
Q Consensus 511 ~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~Nil~~-~~~~~kl~Dfg~ 587 (707)
++||||+++++|.+++... ..+++..++.++.|++.||+|||+. + ++||||||+||+++ .++.+||+|||+
T Consensus 105 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~ 178 (290)
T 1t4h_A 105 VLVTELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGL 178 (290)
T ss_dssp EEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred EEEEEecCCCCHHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCC
Confidence 9999999999999999643 4589999999999999999999999 7 99999999999997 789999999999
Q ss_pred ceecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCC
Q 038671 588 AKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLP 667 (707)
Q Consensus 588 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (707)
+..... .......|++.|+|||.+.+ .++.++||||||+++|+|++|+.||..... .............+
T Consensus 179 ~~~~~~--~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-------~~~~~~~~~~~~~~ 248 (290)
T 1t4h_A 179 ATLKRA--SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN-------AAQIYRRVTSGVKP 248 (290)
T ss_dssp GGGCCT--TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-------HHHHHHHHTTTCCC
T ss_pred cccccc--cccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCc-------HHHHHHHHhccCCc
Confidence 975432 23345679999999998765 589999999999999999999999963221 11222222222111
Q ss_pred CCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 668 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
. ......+.++.+++.+||+.||.+|||++++++.
T Consensus 249 ~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 249 A--SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp G--GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred c--ccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 1 1111223458999999999999999999999863
No 197
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.9e-39 Score=328.64 Aligned_cols=246 Identities=23% Similarity=0.390 Sum_probs=203.3
Q ss_pred HHhcCCCCCceeeecCCeeEEEEEcC-CCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeec-----
Q 038671 433 RVTNDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSH----- 506 (707)
Q Consensus 433 ~~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----- 506 (707)
.+..+|++.+.||+|+||.||+|... +++.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 80 (284)
T 2a19_B 8 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDP 80 (284)
T ss_dssp HHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-
T ss_pred hhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCc
Confidence 34567999999999999999999654 79999999986532 245689999999999999999998854
Q ss_pred -----------CCceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeec
Q 038671 507 -----------ARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLD 575 (707)
Q Consensus 507 -----------~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~ 575 (707)
....++||||+++++|.+++.... ...+++..++.++.|++.||+|||+. |++||||||+||+++
T Consensus 81 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~ 156 (284)
T 2a19_B 81 ETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLV 156 (284)
T ss_dssp --------CCEEEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEE
T ss_pred ccccccccccCcceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEc
Confidence 445899999999999999996532 35689999999999999999999999 999999999999999
Q ss_pred CCCCeEEeccccceecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhh
Q 038671 576 LENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLE 655 (707)
Q Consensus 576 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~ 655 (707)
.++.+||+|||++........ .....|++.|+|||.+.+..++.++||||||+++|+|++|..|+... .
T Consensus 157 ~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----------~ 225 (284)
T 2a19_B 157 DTKQVKIGDFGLVTSLKNDGK-RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET----------S 225 (284)
T ss_dssp ETTEEEECCCTTCEESSCCSC-CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH----------H
T ss_pred CCCCEEECcchhheecccccc-ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH----------H
Confidence 999999999999987764432 33457899999999999988999999999999999999999986421 1
Q ss_pred hhhhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 656 IALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
...........+.. .+..+.+++.+||+.||++||++.|+++.|+
T Consensus 226 ~~~~~~~~~~~~~~------~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~ 270 (284)
T 2a19_B 226 KFFTDLRDGIISDI------FDKKEKTLLQKLLSKKPEDRPNTSEILRTLT 270 (284)
T ss_dssp HHHHHHHTTCCCTT------SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHhhccccccc------CCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 11122222222221 2245889999999999999999999999875
No 198
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.1e-39 Score=336.54 Aligned_cols=255 Identities=24% Similarity=0.315 Sum_probs=197.4
Q ss_pred HhcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCc-----hhhhHHHHHHHHHHHhcCCCCceeeeeeeeecC
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPS-----EMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHA 507 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 507 (707)
..++|++.+.||+|+||.||+|.. .+++.||||++...... .......+.+|++++++++||||+++++++..+
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 456799999999999999999954 56899999998654221 112234588999999999999999999998765
Q ss_pred CceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCC---eEEec
Q 038671 508 RHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENE---AHVSD 584 (707)
Q Consensus 508 ~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~---~kl~D 584 (707)
. .++||||+++++|.+++... ..+++..++.++.||+.||+|||++ ||+||||||+||+++.++. +||+|
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~D 160 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGN---KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 160 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECC
T ss_pred c-eEEEEecCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEcc
Confidence 5 89999999999999998643 4589999999999999999999999 9999999999999987664 99999
Q ss_pred cccceecCCCCCCccccccccCCCCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhh
Q 038671 585 FGTAKFLKPDSSNWAELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEM 661 (707)
Q Consensus 585 fg~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 661 (707)
||++...... .......|++.|+|||.+. +..++.++||||||+++|+|++|+.||...... ........
T Consensus 161 fg~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~~~-- 233 (322)
T 2ycf_A 161 FGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ----VSLKDQIT-- 233 (322)
T ss_dssp CTTCEECCCC-HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS----SCHHHHHH--
T ss_pred Cccceecccc-cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH----HHHHHHHH--
Confidence 9999876432 2223457899999999864 456889999999999999999999999643221 11111111
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 662 LDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
..............+.++.+++.+||+.||++||++.++++
T Consensus 234 -~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 234 -SGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp -HTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -hCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 11111111111223456899999999999999999999986
No 199
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=3.7e-39 Score=349.10 Aligned_cols=195 Identities=24% Similarity=0.361 Sum_probs=154.8
Q ss_pred hcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeec-----CC
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSH-----AR 508 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-----~~ 508 (707)
.++|++.+.||+|+||.||+|. ..+|+.||||++..... .....+.+.+|++++++++||||+++++++.. ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 130 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFE-DLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD 130 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTS-SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhc-CHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence 4689999999999999999995 45789999999865433 33455778999999999999999999999843 35
Q ss_pred ceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccc
Q 038671 509 HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTA 588 (707)
Q Consensus 509 ~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~ 588 (707)
..|+||||+ +++|.+++... ..+++..++.++.||+.||+|||+. ||+||||||+|||++.++.+||+|||++
T Consensus 131 ~~~lv~e~~-~~~L~~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 131 ELYVVLEIA-DSDFKKLFRTP---VYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp CEEEEECCC-SEEHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEecc-ccchhhhcccC---CCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccc
Confidence 789999987 47888888643 4589999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCC---------------------------CccccccccCCCCcccc-ccCCCCccchhHHHHHHHHHHHhC
Q 038671 589 KFLKPDSS---------------------------NWAELAGTYGYVAPELA-YTMKVTEKCDVYSFGVLALEVIKG 637 (707)
Q Consensus 589 ~~~~~~~~---------------------------~~~~~~g~~~y~aPE~~-~~~~~~~~~Dv~slG~~l~el~tg 637 (707)
+....... .....+||+.|+|||++ .+..++.++|||||||++|||++|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 87643211 22345789999999976 456699999999999999999993
No 200
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=2.8e-39 Score=339.39 Aligned_cols=246 Identities=16% Similarity=0.163 Sum_probs=197.2
Q ss_pred hcCCCCCceeeecCCeeEEEE------EcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCC---CCceeeeeeeee
Q 038671 435 TNDFDDEHCIGKGGQGSVYKA------ELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR---HRNIVKFYGFCS 505 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~------~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~ 505 (707)
.++|++.+.||+|+||.||+| ...+++.||+|++... ...++..|++.+.+++ |+|++++++++.
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~ 137 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA------NPWEFYIGTQLMERLKPSMQHMFMKFYSAHL 137 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC------CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEE
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC------ChhHHHHHHHHHHHhhhhhhhhhhhhheeee
Confidence 467999999999999999999 3556889999998653 2345677777777776 999999999999
Q ss_pred cCCceeEEEeeeccCcHHHHHhccc--ccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecC-------
Q 038671 506 HARHSFIVYEYLEMGSLAMILSNDA--AAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDL------- 576 (707)
Q Consensus 506 ~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~------- 576 (707)
..+..++||||+++|+|.+++.... ....+++..++.++.||+.||+|||++ ||+||||||+||+++.
T Consensus 138 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~ 214 (365)
T 3e7e_A 138 FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDD 214 (365)
T ss_dssp CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC--
T ss_pred cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccc
Confidence 9999999999999999999996432 235699999999999999999999999 9999999999999998
Q ss_pred ----CCCeEEeccccceecCC--CCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccc
Q 038671 577 ----ENEAHVSDFGTAKFLKP--DSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSS 650 (707)
Q Consensus 577 ----~~~~kl~Dfg~~~~~~~--~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~ 650 (707)
++.+||+|||+++.+.. ........+||+.|+|||++.+..++.++||||||+++|||+||+.||......
T Consensus 215 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~--- 291 (365)
T 3e7e_A 215 EDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG--- 291 (365)
T ss_dssp ----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT---
T ss_pred cccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC---
Confidence 89999999999976542 223345567999999999999999999999999999999999999998532110
Q ss_pred cchhhhhhhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCC-CCHHHHHHHh
Q 038671 651 SSNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESR-PTIQKVSQLL 705 (707)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R-ps~~~l~~~L 705 (707)
.......+...+ ....+.+++..|++.+|.+| |+++++.+.|
T Consensus 292 --------~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l 334 (365)
T 3e7e_A 292 --------ECKPEGLFRRLP-----HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKL 334 (365)
T ss_dssp --------EEEECSCCTTCS-----SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHH
T ss_pred --------ceeechhccccC-----cHHHHHHHHHHHcCCCCCCcchHHHHHHHHH
Confidence 000111111111 13347789999999999999 5677776655
No 201
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.3e-39 Score=357.81 Aligned_cols=252 Identities=26% Similarity=0.441 Sum_probs=205.3
Q ss_pred hcCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVY 514 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 514 (707)
.++|++.+.||+|+||.||+|.+..+..||||++..... ..+++.+|++++++++||||+++++++.+ +..++||
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~ 340 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 340 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC----CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEee
Confidence 467889999999999999999888888899999875432 24678999999999999999999999876 6789999
Q ss_pred eeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCC
Q 038671 515 EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPD 594 (707)
Q Consensus 515 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 594 (707)
||+.+|+|.+++... ....+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 341 e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 416 (535)
T 2h8h_A 341 EYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDN 416 (535)
T ss_dssp CCCTTEEHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCH
T ss_pred ehhcCCcHHHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCC
Confidence 999999999999642 234589999999999999999999999 9999999999999999999999999999765422
Q ss_pred C-CCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchhhhhhhhhcCCCCCCCCcc
Q 038671 595 S-SNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHN 672 (707)
Q Consensus 595 ~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (707)
. .......++..|+|||.+.+..++.++||||||+++|||++ |+.||..... ......+.. ..+++.+.
T Consensus 417 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~-----~~~~~~i~~--~~~~~~~~-- 487 (535)
T 2h8h_A 417 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-----REVLDQVER--GYRMPCPP-- 487 (535)
T ss_dssp HHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH-----HHHHHHHHT--TCCCCCCT--
T ss_pred ceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHc--CCCCCCCC--
Confidence 1 11123346788999999998899999999999999999999 9999864321 111111111 12222222
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 673 VQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 673 ~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
..+.++.+++.+||+.||++||++++|++.|+
T Consensus 488 --~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~ 519 (535)
T 2h8h_A 488 --ECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 519 (535)
T ss_dssp --TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 23345889999999999999999999999875
No 202
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=2.3e-39 Score=329.31 Aligned_cols=254 Identities=26% Similarity=0.444 Sum_probs=195.4
Q ss_pred hcCCCCCceeeecCCeeEEEEEc--CCCc--EEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCce
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL--PSGE--IVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHS 510 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~--~~~~--~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 510 (707)
.++|++.+.||+|+||.||+|++ .+++ .||+|++...........+.+.+|++++++++||||+++++++..+. .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 35799999999999999999964 2333 68999987654444456678999999999999999999999998755 8
Q ss_pred eEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEecccccee
Q 038671 511 FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKF 590 (707)
Q Consensus 511 ~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~ 590 (707)
++|+||+.+++|.+++... ...+++..++.++.|++.||+|||++ |++||||||+||+++.++.+||+|||++..
T Consensus 96 ~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 170 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRA 170 (291)
T ss_dssp EEEEECCTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred eeeEecccCCCHHHHHHhc--cCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccc
Confidence 8999999999999998643 24589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC---ccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchhhhhhhhhcC--C
Q 038671 591 LKPDSSN---WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNLEIALNEMLD--P 664 (707)
Q Consensus 591 ~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~--~ 664 (707)
....... .....+++.|+|||.+.+..++.++||||||+++|+|++ |+.||..... ......... .
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~ 242 (291)
T 1u46_A 171 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG--------SQILHKIDKEGE 242 (291)
T ss_dssp CCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHHHHTSCC
T ss_pred ccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH--------HHHHHHHHccCC
Confidence 6544322 223457788999999998889999999999999999999 9999864321 111122211 1
Q ss_pred CCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 665 RLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 665 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
..+.+. ..+.++.+++.+||+.||++||++.++++.|+
T Consensus 243 ~~~~~~----~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 280 (291)
T 1u46_A 243 RLPRPE----DCPQDIYNVMVQCWAHKPEDRPTFVALRDFLL 280 (291)
T ss_dssp CCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCc----CcCHHHHHHHHHHccCCcccCcCHHHHHHHHH
Confidence 222221 23456899999999999999999999999874
No 203
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=4.5e-39 Score=344.80 Aligned_cols=201 Identities=23% Similarity=0.380 Sum_probs=168.8
Q ss_pred HhcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecC-----
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHA----- 507 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~----- 507 (707)
+.++|++.+.||+|+||.||+|. ..+++.||||++..... .....+.+.+|++++++++||||+++++++...
T Consensus 24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 102 (432)
T 3n9x_A 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFE-DLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKF 102 (432)
T ss_dssp CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTT-SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhc-ChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcC
Confidence 35789999999999999999995 45789999999976433 334557789999999999999999999999765
Q ss_pred CceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEecccc
Q 038671 508 RHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGT 587 (707)
Q Consensus 508 ~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~ 587 (707)
+..|+||||+. ++|.+++... ..+++..++.++.||+.||+|||+. ||+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGl 175 (432)
T 3n9x_A 103 DELYIVLEIAD-SDLKKLFKTP---IFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGL 175 (432)
T ss_dssp CCEEEEEECCS-EEHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred CeEEEEEecCC-cCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCC
Confidence 57899999986 5999998643 4589999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCC----------------------CccccccccCCCCcccc-ccCCCCccchhHHHHHHHHHHHhCCCCCC
Q 038671 588 AKFLKPDSS----------------------NWAELAGTYGYVAPELA-YTMKVTEKCDVYSFGVLALEVIKGKHPRD 642 (707)
Q Consensus 588 ~~~~~~~~~----------------------~~~~~~g~~~y~aPE~~-~~~~~~~~~Dv~slG~~l~el~tg~~p~~ 642 (707)
++....... .....+||+.|+|||++ .+..++.++||||+||++|||++|..||.
T Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 176 ARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp CEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred cccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 987654321 23556899999999985 55669999999999999999998666553
No 204
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.7e-39 Score=357.63 Aligned_cols=245 Identities=24% Similarity=0.363 Sum_probs=195.5
Q ss_pred eeeecCCeeEEEEEcC---CCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEEEeeecc
Q 038671 443 CIGKGGQGSVYKAELP---SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLEM 519 (707)
Q Consensus 443 ~lg~G~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 519 (707)
.||+|+||.||+|..+ ++..||||++..... ....+++.+|++++++++||||+++++++.. +..++||||+.+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~ 419 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE--KADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGG 419 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCS--STTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCC
Confidence 7999999999999543 567799999976432 2356789999999999999999999999976 568999999999
Q ss_pred CcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCCC--
Q 038671 520 GSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN-- 597 (707)
Q Consensus 520 ~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-- 597 (707)
|+|.+++... ...+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++........
T Consensus 420 g~L~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 494 (613)
T 2ozo_A 420 GPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 494 (613)
T ss_dssp CBHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-------
T ss_pred CcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceee
Confidence 9999999643 34689999999999999999999999 9999999999999999999999999999876533221
Q ss_pred -ccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchhhhhhhhhcCCCCCCCCcchHH
Q 038671 598 -WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHNVQD 675 (707)
Q Consensus 598 -~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (707)
.....+++.|+|||++.+..++.++||||||+++|||++ |+.||..... ......+... .+++.+. .
T Consensus 495 ~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~-----~~~~~~i~~~--~~~~~p~----~ 563 (613)
T 2ozo_A 495 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG-----PEVMAFIEQG--KRMECPP----E 563 (613)
T ss_dssp -------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS-----HHHHHHHHTT--CCCCCCT----T
T ss_pred eccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH-----HHHHHHHHcC--CCCCCCC----c
Confidence 122345688999999998899999999999999999998 9999974332 1111112111 1222222 2
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 676 KLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 676 ~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
.+.++.+++.+||+.||++||++.++++.|+
T Consensus 564 ~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~ 594 (613)
T 2ozo_A 564 CPPELYALMSDCWIYKWEDRPDFLTVEQRMR 594 (613)
T ss_dssp CCHHHHHHHHHTTCSSTTTSCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 3456899999999999999999999998875
No 205
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=6.2e-39 Score=327.44 Aligned_cols=258 Identities=22% Similarity=0.346 Sum_probs=200.8
Q ss_pred cCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEEE
Q 038671 436 NDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVY 514 (707)
Q Consensus 436 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 514 (707)
++|++.+.||+|+||.||+|+. .+|+.||+|++...... ....+.+.+|++++++++||||+++++++..++..++||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET-EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC---------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccc-hhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEE
Confidence 5789999999999999999965 47999999998654322 123356889999999999999999999999999999999
Q ss_pred eeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCC
Q 038671 515 EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPD 594 (707)
Q Consensus 515 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 594 (707)
||+. ++|.+++.... ...+++..++.++.|++.||+|||+. |++||||||+||+++.++.+||+|||.+......
T Consensus 82 e~~~-~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 156 (299)
T 2r3i_A 82 EFLH-QDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156 (299)
T ss_dssp ECCS-EEHHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC
T ss_pred Eccc-CCHHHHHHhhh-ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCC
Confidence 9998 59999886443 24589999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCCccccccccCCCCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhc-----------
Q 038671 595 SSNWAELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEML----------- 662 (707)
Q Consensus 595 ~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~----------- 662 (707)
........+++.|+|||.+.+.. ++.++||||||+++|+|++|+.||....... ..........
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 232 (299)
T 2r3i_A 157 VRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID----QLFRIFRTLGTPDEVVWPGVT 232 (299)
T ss_dssp SBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHHHHCCCCTTTSTTGG
T ss_pred ccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHH----HHHHHHHHhCCCchhhhhHhh
Confidence 44444567899999999988765 7899999999999999999999997432211 1111111000
Q ss_pred -----CCCCCCCC-cc----hHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 663 -----DPRLPTPS-HN----VQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 663 -----~~~~~~~~-~~----~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
.+..+... .. ....+.++.+++.+|++.||++|||+.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp GSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00111000 00 0123456889999999999999999999986
No 206
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2e-39 Score=331.54 Aligned_cols=253 Identities=23% Similarity=0.391 Sum_probs=198.1
Q ss_pred HhcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeE
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFI 512 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 512 (707)
..++|++.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+++++.++||||+++++++..++..++
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 93 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWI 93 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC---HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEE
Confidence 356899999999999999999965 468999999986542 2245678899999999999999999999999999999
Q ss_pred EEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecC
Q 038671 513 VYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLK 592 (707)
Q Consensus 513 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~ 592 (707)
||||+++++|.+++... ...+++..++.++.|++.||+|||+. |++||||||+||+++.++.+||+|||++....
T Consensus 94 v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 168 (302)
T 2j7t_A 94 MIEFCPGGAVDAIMLEL--DRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNL 168 (302)
T ss_dssp EEECCTTEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHH
T ss_pred EEEeCCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccc
Confidence 99999999999988542 34589999999999999999999999 99999999999999999999999999875432
Q ss_pred CCCCCccccccccCCCCcccc-----ccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCC
Q 038671 593 PDSSNWAELAGTYGYVAPELA-----YTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLP 667 (707)
Q Consensus 593 ~~~~~~~~~~g~~~y~aPE~~-----~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (707)
..........|++.|+|||.+ .+..++.++||||||+++|+|++|+.||...... ...........+...
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~ 243 (302)
T 2j7t_A 169 KTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM-----RVLLKIAKSDPPTLL 243 (302)
T ss_dssp HHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHHHHHHSCCCCCS
T ss_pred ccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH-----HHHHHHhccCCcccC
Confidence 221222345789999999987 3567889999999999999999999998643221 011111111111111
Q ss_pred CCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 668 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
. ....+.++.+++.+||+.||++|||+.++++
T Consensus 244 ~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 244 T----PSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp S----GGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred C----ccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 1 1223456899999999999999999999976
No 207
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=356.65 Aligned_cols=169 Identities=26% Similarity=0.286 Sum_probs=107.7
Q ss_pred hhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCc-cccCCCCcccEEEccCCccCCCCCccccCcc
Q 038671 164 AEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLS-LELGSLTQLERLDLSSNRLSNSIPKSLGNLV 242 (707)
Q Consensus 164 ~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~ 242 (707)
..+..+++|++|++++|.+.+..+. +..+++|++|++++|.+++..+ ..+..+++|++|++++|.+++..+..|.+++
T Consensus 367 ~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 445 (570)
T 2z63_A 367 QSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLS 445 (570)
T ss_dssp HHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCT
T ss_pred ccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCC
Confidence 3344444555555555554422222 5555566666666666654433 3456666666777766666666666666677
Q ss_pred cCceEeeeccccc-ccCchhhhhcccCCeeeecCccCCCCCCcccccccccceEeccccccCCchhHhhccCCCceeEee
Q 038671 243 KLHYLNLSNNQFI-KKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDI 321 (707)
Q Consensus 243 ~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~l 321 (707)
+|+.|++++|.+. +..|..+..+++|+.|++++|.+++..|..+..+++|+.|++++|++++..+..+..+++|+.|++
T Consensus 446 ~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 525 (570)
T 2z63_A 446 SLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWL 525 (570)
T ss_dssp TCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEEC
T ss_pred cCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEe
Confidence 7777777777665 345566667777777777777776666667777777777777777777666666777777777777
Q ss_pred ccCcccccCCCc
Q 038671 322 SYNELHGSIPNS 333 (707)
Q Consensus 322 ~~n~~~~~~~~~ 333 (707)
++|+|+|.+|..
T Consensus 526 ~~N~~~~~~~~~ 537 (570)
T 2z63_A 526 HTNPWDCSCPRI 537 (570)
T ss_dssp CSSCBCCCTTTT
T ss_pred cCCcccCCCcch
Confidence 777777777654
No 208
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=5.5e-39 Score=335.53 Aligned_cols=258 Identities=22% Similarity=0.319 Sum_probs=197.9
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeec-------
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSH------- 506 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------- 506 (707)
.++|++.+.||+|+||.||+|+. .+|+.||+|++....... .....+.+|+++++.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE-GFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 94 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSS-SSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccc-cchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence 36799999999999999999965 679999999986543322 234567889999999999999999999876
Q ss_pred -CCceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEecc
Q 038671 507 -ARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDF 585 (707)
Q Consensus 507 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Df 585 (707)
.+..++||||+.+ ++.+.+... ...+++..++.++.||+.||+|||+. ||+||||||+||+++.++.+||+||
T Consensus 95 ~~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Df 168 (351)
T 3mi9_A 95 CKGSIYLVFDFCEH-DLAGLLSNV--LVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADF 168 (351)
T ss_dssp --CEEEEEEECCSE-EHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CCceEEEEEeccCC-CHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccc
Confidence 4468999999986 666666433 24589999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCC----CCccccccccCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhh
Q 038671 586 GTAKFLKPDS----SNWAELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNE 660 (707)
Q Consensus 586 g~~~~~~~~~----~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 660 (707)
|++....... .......||+.|+|||++.+ ..++.++||||||+++|+|++|+.||...... .....+..
T Consensus 169 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----~~~~~i~~ 243 (351)
T 3mi9_A 169 GLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ-----HQLALISQ 243 (351)
T ss_dssp TTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-----HHHHHHHH
T ss_pred hhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHHH
Confidence 9998765322 22345678999999998876 45799999999999999999999999742211 00000000
Q ss_pred hcCCCC------------------CC-CCcchHH------HHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 661 MLDPRL------------------PT-PSHNVQD------KLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 661 ~~~~~~------------------~~-~~~~~~~------~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
...... .. ......+ ....+.+++.+||+.||++|||++|+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 244 LCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp HHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 000000 00 0000111 13458899999999999999999999863
No 209
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=6.8e-39 Score=336.78 Aligned_cols=254 Identities=21% Similarity=0.320 Sum_probs=192.5
Q ss_pred hcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCC-----
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHAR----- 508 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----- 508 (707)
.++|++.+.||+|+||.||+|. ..+++.||||++...... ....+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 102 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN-QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 102 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSS-HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCC-hHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence 4689999999999999999995 457899999998764332 334567889999999999999999999997654
Q ss_pred -ceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEecccc
Q 038671 509 -HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGT 587 (707)
Q Consensus 509 -~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~ 587 (707)
..++||||+++ +|.+.+. ..+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 103 QDVYIVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 173 (371)
T ss_dssp CEEEEEEECCSE-EHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred cceEEEEEcCCC-CHHHHHh-----hccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeec
Confidence 67999999975 6777774 2488999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhh-------
Q 038671 588 AKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNE------- 660 (707)
Q Consensus 588 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~------- 660 (707)
+...... .......||+.|+|||++.+..++.++||||||+++|+|++|+.||....... ........
T Consensus 174 a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~----~~~~i~~~~~~~~~~ 248 (371)
T 2xrw_A 174 ARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID----QWNKVIEQLGTPCPE 248 (371)
T ss_dssp -----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHC-CCCCCHH
T ss_pred ccccccc-cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHhCCCCHH
Confidence 9865432 22344678999999999999899999999999999999999999996432211 00000000
Q ss_pred -----------h--cCCC--------------CCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 661 -----------M--LDPR--------------LPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 661 -----------~--~~~~--------------~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
. ..+. .+.........+.++.+++.+||..||++|||++|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 249 FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp HHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 0 0011 01111112334667999999999999999999999986
No 210
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.9e-40 Score=342.75 Aligned_cols=256 Identities=17% Similarity=0.239 Sum_probs=199.3
Q ss_pred hcCCCCCceeeecCCeeEEEEEcC---------CCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceee------
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAELP---------SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVK------ 499 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~------ 499 (707)
.++|++.+.||+|+||.||+|+.. +++.||+|++... +.+.+|++++++++|||+++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--------~~~~~E~~~l~~l~h~niv~~~~~~~ 112 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--------GRLFNEQNFFQRAAKPLQVNKWKKLY 112 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--------STHHHHHHHHHHHCCHHHHHHHHHHT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--------chHHHHHHHHHHhcccchhhhhhhhc
Confidence 367999999999999999999665 3789999998643 35778999999999999887
Q ss_pred ---------eeeeeec-CCceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCC
Q 038671 500 ---------FYGFCSH-ARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISS 569 (707)
Q Consensus 500 ---------~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~ 569 (707)
+++++.. .+..++||||+ +++|.+++.... ...+++..++.++.||+.||+|||++ ||+||||||
T Consensus 113 ~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp 187 (352)
T 2jii_A 113 STPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP-KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTA 187 (352)
T ss_dssp TCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCG
T ss_pred cCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCH
Confidence 5666665 67889999999 999999997542 35699999999999999999999999 999999999
Q ss_pred CCeeecCCC--CeEEeccccceecCCCCC-------CccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCC
Q 038671 570 KNVLLDLEN--EAHVSDFGTAKFLKPDSS-------NWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640 (707)
Q Consensus 570 ~Nil~~~~~--~~kl~Dfg~~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p 640 (707)
+||+++.++ .+||+|||+++....... ......||+.|+|||.+.+..++.++||||||+++|||++|+.|
T Consensus 188 ~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p 267 (352)
T 2jii_A 188 ENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLP 267 (352)
T ss_dssp GGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCT
T ss_pred HHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 999999998 999999999987653321 12345799999999999998999999999999999999999999
Q ss_pred CCcccccccccchhhhhhhhhcC--CCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 641 RDFISSISSSSSNLEIALNEMLD--PRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
|...... ............. ..+..........+.++.+++.+||+.||++||+++++++.|+
T Consensus 268 f~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 332 (352)
T 2jii_A 268 WTNCLPN---TEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLE 332 (352)
T ss_dssp TGGGTTC---HHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred cccCCcC---HHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHH
Confidence 9743211 1111111111111 1111111011122356899999999999999999999999874
No 211
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=3.5e-39 Score=332.22 Aligned_cols=257 Identities=21% Similarity=0.348 Sum_probs=201.1
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeee----cCCc
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCS----HARH 509 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~----~~~~ 509 (707)
.++|++.+.||+|+||.||++.. .+|+.||+|++... .....+.+.+|+++++.++||||+++++++. ....
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH---EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHE 104 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC---CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCce
Confidence 46799999999999999999964 67999999988542 2335677899999999999999999999986 3457
Q ss_pred eeEEEeeeccCcHHHHHhccc-ccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccc
Q 038671 510 SFIVYEYLEMGSLAMILSNDA-AAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTA 588 (707)
Q Consensus 510 ~~lv~e~~~~~~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~ 588 (707)
.++||||+.+++|.+++.... ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+
T Consensus 105 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 105 AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp EEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred eEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 899999999999999986532 235689999999999999999999999 9999999999999999999999999998
Q ss_pred eecCCCCCC---------ccccccccCCCCccccccCC---CCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhh
Q 038671 589 KFLKPDSSN---------WAELAGTYGYVAPELAYTMK---VTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEI 656 (707)
Q Consensus 589 ~~~~~~~~~---------~~~~~g~~~y~aPE~~~~~~---~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~ 656 (707)
......... .....|++.|+|||.+.+.. ++.++||||||+++|+|++|+.||+..... ......
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~ 258 (317)
T 2buj_A 182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK---GDSVAL 258 (317)
T ss_dssp EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHT---TSCHHH
T ss_pred hhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcc---cchhhH
Confidence 765322111 12345799999999987554 688999999999999999999998632110 111111
Q ss_pred hhhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 657 ALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
.... ....+... ..+.++.+++.+||+.||.+||++.++++.|+
T Consensus 259 ~~~~--~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 302 (317)
T 2buj_A 259 AVQN--QLSIPQSP----RHSSALWQLLNSMMTVDPHQRPHIPLLLSQLE 302 (317)
T ss_dssp HHHC--C--CCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred Hhhc--cCCCCccc----cCCHHHHHHHHHHhhcChhhCCCHHHHHHHhh
Confidence 1111 11122211 23356899999999999999999999999875
No 212
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-39 Score=340.24 Aligned_cols=256 Identities=21% Similarity=0.311 Sum_probs=201.5
Q ss_pred cCCCCCceeeecCCeeEEEEEc----CCCcEEEEEecCCCCCc-hhhhHHHHHHHHHHHhcC-CCCceeeeeeeeecCCc
Q 038671 436 NDFDDEHCIGKGGQGSVYKAEL----PSGEIVAVKKFHSPLPS-EMASQQEFLNEVKTLTGI-RHRNIVKFYGFCSHARH 509 (707)
Q Consensus 436 ~~~~~~~~lg~G~~g~vy~~~~----~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 509 (707)
++|++.+.||+|+||.||+|+. .+++.||||++...... .....+.+.+|+++++++ +||||+++++++...+.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 5799999999999999999965 47899999998643211 112234567789999999 69999999999999999
Q ss_pred eeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccce
Q 038671 510 SFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAK 589 (707)
Q Consensus 510 ~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~ 589 (707)
.++||||+++++|.+++... ..+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQR---ERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred EEEEeecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 99999999999999999643 3589999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCC-CCccccccccCCCCcccccc--CCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCC
Q 038671 590 FLKPDS-SNWAELAGTYGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRL 666 (707)
Q Consensus 590 ~~~~~~-~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (707)
...... .......||+.|+|||++.+ ..++.++||||||+++|||++|+.||...... ...............
T Consensus 208 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~----~~~~~~~~~~~~~~~ 283 (355)
T 1vzo_A 208 EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEK----NSQAEISRRILKSEP 283 (355)
T ss_dssp ECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSC----CCHHHHHHHHHHCCC
T ss_pred ecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCcc----chHHHHHHHHhccCC
Confidence 754332 22334679999999999885 34788999999999999999999999643221 111122222222222
Q ss_pred CCCCcchHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHh
Q 038671 667 PTPSHNVQDKLISIMEVAISCLDESPESRP-----TIQKVSQLL 705 (707)
Q Consensus 667 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----s~~~l~~~L 705 (707)
+.+. ..+..+.+++.+||+.||++|| +++++++..
T Consensus 284 ~~~~----~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 284 PYPQ----EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp CCCT----TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred CCCc----ccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 2222 2234588999999999999999 999998753
No 213
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=2.2e-39 Score=339.77 Aligned_cols=259 Identities=23% Similarity=0.356 Sum_probs=203.1
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIV 513 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 513 (707)
.++|++.+.||+|+||.||+|.. .+++.||+|++.... .....+.+.+|+.++++++||||+++++++..++..++|
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 109 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 109 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC--CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc--CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEE
Confidence 46799999999999999999955 578999999987643 233457789999999999999999999999999999999
Q ss_pred EeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCC
Q 038671 514 YEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKP 593 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~ 593 (707)
|||+++++|.+++... ..+++..+..++.|++.||+|||+.+ ||+||||||+||+++.++.+||+|||++.....
T Consensus 110 ~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 184 (360)
T 3eqc_A 110 MEHMDGGSLDQVLKKA---GRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 184 (360)
T ss_dssp ECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred EECCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCccccc
Confidence 9999999999999643 35899999999999999999999842 899999999999999999999999999875432
Q ss_pred CCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccc------------------------
Q 038671 594 DSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISS------------------------ 649 (707)
Q Consensus 594 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~------------------------ 649 (707)
. ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||........
T Consensus 185 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (360)
T 3eqc_A 185 S--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 262 (360)
T ss_dssp H--C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-------------------
T ss_pred c--cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCC
Confidence 2 22345789999999999999999999999999999999999999964221000
Q ss_pred ----------ccchhhhhhhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 650 ----------SSSNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 650 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
.................+... ....+.++.+++.+||+.||++|||++|+++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 263 PLNKFGMDSRPPMAIFELLDYIVNEPPPKLP--SGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp -----------CCCHHHHHHHHHHSCCCCCC--TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cccccccCCCCcccchhhhhHHhccCCCCCC--cccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 000000011111111111100 01124468999999999999999999999863
No 214
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.6e-39 Score=332.58 Aligned_cols=261 Identities=26% Similarity=0.427 Sum_probs=186.3
Q ss_pred HHhcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCcee
Q 038671 433 RVTNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSF 511 (707)
Q Consensus 433 ~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 511 (707)
...++|++.+.||+|+||.||+|.. .+++.||+|++..... ....+++.+|++.+++++||||+++++++...+..+
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 89 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC--QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELW 89 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC------------------CCCCCCCTTBCCEEEEEESSSCEE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc--chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcE
Confidence 4467899999999999999999965 4789999999865422 224567889999999999999999999999999999
Q ss_pred EEEeeeccCcHHHHHhcc-----cccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccc
Q 038671 512 IVYEYLEMGSLAMILSND-----AAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFG 586 (707)
Q Consensus 512 lv~e~~~~~~L~~~l~~~-----~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg 586 (707)
+||||+++++|.+++... .....+++..++.++.||+.||+|||+. |++||||||+||+++.++.+||+|||
T Consensus 90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 166 (303)
T 2vwi_A 90 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFG 166 (303)
T ss_dssp EEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCH
T ss_pred EEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEecc
Confidence 999999999999998632 1234589999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCC-----CccccccccCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhh
Q 038671 587 TAKFLKPDSS-----NWAELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNE 660 (707)
Q Consensus 587 ~~~~~~~~~~-----~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 660 (707)
++........ ......|++.|+|||.+.+ ..++.++||||||+++|+|++|+.||....... ........
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~~~~ 242 (303)
T 2vwi_A 167 VSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK----VLMLTLQN 242 (303)
T ss_dssp HHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG----HHHHHHTS
T ss_pred chheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh----HHHHHhcc
Confidence 9976543321 1234578999999998875 568999999999999999999999997432211 11111110
Q ss_pred hcCCCCCC---CCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 661 MLDPRLPT---PSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 661 ~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
..+.... ........+.++.+++.+||+.||.+||++.++++
T Consensus 243 -~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 243 -DPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp -SCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred -CCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 0001100 00011123356889999999999999999999986
No 215
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=5e-39 Score=325.83 Aligned_cols=255 Identities=24% Similarity=0.323 Sum_probs=205.5
Q ss_pred HHHhcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCce
Q 038671 432 IRVTNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHS 510 (707)
Q Consensus 432 ~~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 510 (707)
..+.++|++.+.||+|+||.||+|.. .+++.||+|++...... ....+.+.+|++++++++||||+++++++...+..
T Consensus 18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 96 (287)
T 2wei_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKLDHPNIMKLFEILEDSSSF 96 (287)
T ss_dssp HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBS-SSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccc-hHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeE
Confidence 45677899999999999999999965 47899999998643222 22456789999999999999999999999999999
Q ss_pred eEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCC---CCeEEecccc
Q 038671 511 FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLE---NEAHVSDFGT 587 (707)
Q Consensus 511 ~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~---~~~kl~Dfg~ 587 (707)
++||||+.+++|.+++... ..+++..++.++.||+.||+|||+. |++||||||+||+++.+ +.+||+|||+
T Consensus 97 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~ 170 (287)
T 2wei_A 97 YIVGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGL 170 (287)
T ss_dssp EEEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTG
T ss_pred EEEEEccCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCc
Confidence 9999999999999888543 3589999999999999999999999 99999999999999764 4699999999
Q ss_pred ceecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCC
Q 038671 588 AKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLP 667 (707)
Q Consensus 588 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (707)
+....... ......+++.|+|||.+.+. ++.++||||||+++|+|++|+.||..... ......+......
T Consensus 171 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~--------~~~~~~~~~~~~~ 240 (287)
T 2wei_A 171 STCFQQNT-KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNE--------YDILKRVETGKYA 240 (287)
T ss_dssp GGTBCCCS-SCSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCC
T ss_pred ceeecCCC-ccccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHcCCCC
Confidence 98665432 23345689999999988764 89999999999999999999999864221 1112222222222
Q ss_pred CCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 668 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
.+.......+.++.+++.+||+.||++|||+.++++
T Consensus 241 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 241 FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp CCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 221122233456899999999999999999999986
No 216
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=9.2e-39 Score=324.68 Aligned_cols=255 Identities=23% Similarity=0.374 Sum_probs=188.4
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIV 513 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 513 (707)
.++|++.+.||+|+||.||+|+. .+|+.||+|++...... ....+.+.++...++.++||||+++++++.+++..++|
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS-QEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CH-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCc-HHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 46799999999999999999964 67999999998764322 23344455666668888999999999999999999999
Q ss_pred EeeeccCcHHHHHhcc-cccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecC
Q 038671 514 YEYLEMGSLAMILSND-AAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLK 592 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~ 592 (707)
|||+++ +|.+++... .....+++..++.++.|++.||+|||+++ |++||||||+||+++.++.+||+|||++....
T Consensus 85 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 85 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp EECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred Eehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 999975 887776532 22356999999999999999999999853 89999999999999999999999999998765
Q ss_pred CCCCCccccccccCCCCcccc----ccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCC
Q 038671 593 PDSSNWAELAGTYGYVAPELA----YTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPT 668 (707)
Q Consensus 593 ~~~~~~~~~~g~~~y~aPE~~----~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (707)
.... .....|++.|+|||.+ .+..++.++||||+|+++|+|++|+.||+.... ................
T Consensus 162 ~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~~~ 234 (290)
T 3fme_A 162 DDVA-KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT------PFQQLKQVVEEPSPQL 234 (290)
T ss_dssp ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC------HHHHHHHHHHSCCCCC
T ss_pred cccc-ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc------hHHHHHHHhccCCCCc
Confidence 4322 2334789999999995 556789999999999999999999999963211 1111111122222111
Q ss_pred CCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 669 PSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 669 ~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
+. ...+.++.+++.+||+.||++|||+.|+++
T Consensus 235 ~~---~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 235 PA---DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp CT---TTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred cc---ccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 11 123455899999999999999999999986
No 217
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=328.77 Aligned_cols=253 Identities=25% Similarity=0.401 Sum_probs=195.5
Q ss_pred HHhcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcC-CCCceeeeeeeeec----
Q 038671 433 RVTNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGFCSH---- 506 (707)
Q Consensus 433 ~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~---- 506 (707)
...++|++.+.||+|+||.||+|+. .+|+.||+|++..... ..+.+.+|+.+++++ +||||+++++++..
T Consensus 21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 96 (326)
T 2x7f_A 21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD----EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 96 (326)
T ss_dssp CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc----cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCc
Confidence 3467899999999999999999965 5799999999865322 235788999999999 79999999999976
Q ss_pred --CCceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEec
Q 038671 507 --ARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSD 584 (707)
Q Consensus 507 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~D 584 (707)
.+..++||||+++++|.+++.... ...+++..++.++.||+.||+|||+. |++||||||+||+++.++.+||+|
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~D 172 (326)
T 2x7f_A 97 GMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVD 172 (326)
T ss_dssp CCCCEEEEEEECCTTEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECC
T ss_pred cccceEEEEEEcCCCCcHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEee
Confidence 467899999999999999997543 34689999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCccccccccCCCCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhh
Q 038671 585 FGTAKFLKPDSSNWAELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALN 659 (707)
Q Consensus 585 fg~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 659 (707)
||++..............|++.|+|||.+. +..++.++||||||+++|+|++|+.||...... .......
T Consensus 173 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~ 247 (326)
T 2x7f_A 173 FGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM-----RALFLIP 247 (326)
T ss_dssp CTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHHHHH
T ss_pred CcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH-----HHHHHhh
Confidence 999987654433344567899999999987 556889999999999999999999998632211 0001111
Q ss_pred hhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 660 EMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
....+.... ...+..+.+++.+||+.||.+||+++++++
T Consensus 248 ~~~~~~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 248 RNPAPRLKS-----KKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HSCCCCCSC-----SCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cCccccCCc-----cccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 111111111 122346889999999999999999999986
No 218
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=345.58 Aligned_cols=329 Identities=21% Similarity=0.177 Sum_probs=298.8
Q ss_pred CCCceeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeec
Q 038671 3 SNLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTL 82 (707)
Q Consensus 3 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l 82 (707)
+++++|+|++|+|++..+..|..+++|++|+|++|.+++..|.+|.++++|++|+|++|.++...+..|.++++|++|+|
T Consensus 32 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 111 (477)
T 2id5_A 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 111 (477)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEEC
T ss_pred CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEEC
Confidence 47899999999999998999999999999999999999888999999999999999999999887788999999999999
Q ss_pred ccccccccCC-CCCCCCCccEEEeccCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccCCC
Q 038671 83 ENNQLRGPIP-NLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGS 161 (707)
Q Consensus 83 ~~n~i~~~~~-~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~ 161 (707)
++|.+..+.+ .+..+++|++|++++|.++.+.+..|..+++|++|+|++|.++.+.+..|..+++|+.|+|++|.+.+.
T Consensus 112 s~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~ 191 (477)
T 2id5_A 112 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAI 191 (477)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEE
T ss_pred CCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEe
Confidence 9999998755 589999999999999999999999999999999999999999988878899999999999999999988
Q ss_pred CchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccccCc
Q 038671 162 MPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNL 241 (707)
Q Consensus 162 ~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l 241 (707)
.+..|..+++|+.|++++|...+..+.......+|++|++++|.++...+..+..+++|+.|+|++|.+++..+..|.++
T Consensus 192 ~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 271 (477)
T 2id5_A 192 RDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHEL 271 (477)
T ss_dssp CTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTC
T ss_pred ChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhcccc
Confidence 88899999999999999998877777777777799999999999997766789999999999999999998888899999
Q ss_pred ccCceEeeecccccccCchhhhhcccCCeeeecCccCCCCCCcccccccccceEeccccccCCchhHhhccCCCceeEee
Q 038671 242 VKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDI 321 (707)
Q Consensus 242 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~l 321 (707)
++|+.|+|++|++.+..+..|.++++|+.|+|++|.+++..+..|..+++|+.|++++|++.+.....+ -......+.+
T Consensus 272 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~-~~~~~~~~~~ 350 (477)
T 2id5_A 272 LRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLW-VFRRRWRLNF 350 (477)
T ss_dssp TTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHH-HHTTTTSSCC
T ss_pred ccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchHh-HHhhhhcccc
Confidence 999999999999999999999999999999999999988888888999999999999999986544222 2233445667
Q ss_pred ccCcccccCCC
Q 038671 322 SYNELHGSIPN 332 (707)
Q Consensus 322 ~~n~~~~~~~~ 332 (707)
.++...|..|.
T Consensus 351 ~~~~~~C~~p~ 361 (477)
T 2id5_A 351 NRQQPTCATPE 361 (477)
T ss_dssp TTCCCBEEESG
T ss_pred CccCceeCCch
Confidence 78888887654
No 219
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=9.6e-39 Score=371.37 Aligned_cols=328 Identities=24% Similarity=0.219 Sum_probs=197.5
Q ss_pred CCCCCceeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcC--ccCCCCCcEEEcccCcCcccCC-ccccCCCCC
Q 038671 1 NLSNLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHS--LGNLTQITFLTLFDNALSGAIP-KEYGNLVKL 77 (707)
Q Consensus 1 nl~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~--~~~l~~L~~L~L~~n~i~~~~~-~~~~~l~~L 77 (707)
+|++|++|+|++|.|++..|+.|+++++|++|+|++|.+++..+.. |.++++|++|+|++|.+++..+ ..|+++++|
T Consensus 71 ~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L 150 (844)
T 3j0a_A 71 NLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSL 150 (844)
T ss_dssp SCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSC
T ss_pred CCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCC
Confidence 3566777777777777666677777777777777777766544443 6677777777777777665543 456777777
Q ss_pred CeeecccccccccCC-CC--------------------------CC----------------------------------
Q 038671 78 TLLTLENNQLRGPIP-NL--------------------------RN---------------------------------- 96 (707)
Q Consensus 78 ~~L~l~~n~i~~~~~-~l--------------------------~~---------------------------------- 96 (707)
++|+|++|.++...+ .+ ..
T Consensus 151 ~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~ 230 (844)
T 3j0a_A 151 KSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISK 230 (844)
T ss_dssp CEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCS
T ss_pred CEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCc
Confidence 777777766543111 00 00
Q ss_pred ----------------------------------CCCccEEEeccCccccccCccccCCCCCcEEEcccccccccCCCCC
Q 038671 97 ----------------------------------LTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDW 142 (707)
Q Consensus 97 ----------------------------------l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~ 142 (707)
.++|+.|++++|.++.+.+..|..+++|+.|+|++|.++.+.+..|
T Consensus 231 ~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~ 310 (844)
T 3j0a_A 231 SQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAF 310 (844)
T ss_dssp CCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTT
T ss_pred ccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHh
Confidence 0234444444444444444555556666666666666666666666
Q ss_pred CCCCCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCc-----------
Q 038671 143 GRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLS----------- 211 (707)
Q Consensus 143 ~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~----------- 211 (707)
..+++|++|+|++|.+++..+..|..+++|+.|++++|.+....+..|..+++|++|++++|.+++...
T Consensus 311 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~ 390 (844)
T 3j0a_A 311 YGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSG 390 (844)
T ss_dssp TTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEES
T ss_pred cCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCC
Confidence 666666666666666665556666666666666666666665555556666666666666666553110
Q ss_pred -----------------------------cccCCCCcccEEEccCCccCCCC----------------------------
Q 038671 212 -----------------------------LELGSLTQLERLDLSSNRLSNSI---------------------------- 234 (707)
Q Consensus 212 -----------------------------~~~~~l~~L~~L~l~~n~i~~~~---------------------------- 234 (707)
..+..+++|++|+|++|++++..
T Consensus 391 N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~ 470 (844)
T 3j0a_A 391 NKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETE 470 (844)
T ss_dssp CCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSC
T ss_pred CCcccccccccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccc
Confidence 00123445555555555544221
Q ss_pred --CccccCcccCceEeeecccccccCchhhhhcccCCeeeecCccCCCCCCcccccccccceEeccccccCCchhHhhcc
Q 038671 235 --PKSLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEE 312 (707)
Q Consensus 235 --~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~ 312 (707)
+..|.++++|+.|+|++|.+++..+..|.++++|+.|+|++|.+++..+..+. ++|+.|++++|++++..|+.
T Consensus 471 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~--- 545 (844)
T 3j0a_A 471 LCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV--- 545 (844)
T ss_dssp CCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCC---
T ss_pred cchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhH---
Confidence 12344555666666666666665566666666666666666666655554444 56667777777776665544
Q ss_pred CCCceeEeeccCcccccCCCc
Q 038671 313 LHGLSYIDISYNELHGSIPNS 333 (707)
Q Consensus 313 ~~~L~~l~l~~n~~~~~~~~~ 333 (707)
+.+|+.|++++|+|.|.|+..
T Consensus 546 ~~~L~~l~l~~Np~~C~c~~~ 566 (844)
T 3j0a_A 546 FVSLSVLDITHNKFICECELS 566 (844)
T ss_dssp CSSCCEEEEEEECCCCSSSCC
T ss_pred hCCcCEEEecCCCcccccccH
Confidence 347888999999999988753
No 220
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=6.8e-39 Score=333.21 Aligned_cols=251 Identities=23% Similarity=0.339 Sum_probs=185.1
Q ss_pred hcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCC-CCceeeeeeeee-------
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR-HRNIVKFYGFCS------- 505 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~------- 505 (707)
..+|++.+.||+|+||.||+|+ ..+++.||+|++... .....+.+.+|+..+.++. ||||+++++++.
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 103 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN---EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESD 103 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTST
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC---chHHHHHHHHHHHHHHHhccCCChhhccccccccccccc
Confidence 4579999999999999999996 457999999988543 2334567899999999996 999999999983
Q ss_pred -cCCceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCC--eEecCCCCCCeeecCCCCeEE
Q 038671 506 -HARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPP--IVHRDISSKNVLLDLENEAHV 582 (707)
Q Consensus 506 -~~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~Nil~~~~~~~kl 582 (707)
.....+++|||+. |+|.+++........+++..++.++.||+.||+|||+. + |+||||||+||+++.++.+||
T Consensus 104 ~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl 179 (337)
T 3ll6_A 104 TGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKL 179 (337)
T ss_dssp TSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEB
T ss_pred cCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEE
Confidence 3445799999996 78888886544455799999999999999999999999 8 999999999999999999999
Q ss_pred eccccceecCCCCCC------------ccccccccCCCCcccc---ccCCCCccchhHHHHHHHHHHHhCCCCCCccccc
Q 038671 583 SDFGTAKFLKPDSSN------------WAELAGTYGYVAPELA---YTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSI 647 (707)
Q Consensus 583 ~Dfg~~~~~~~~~~~------------~~~~~g~~~y~aPE~~---~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~ 647 (707)
+|||++......... .....||+.|+|||.+ .+..++.++||||||+++|+|++|+.||......
T Consensus 180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~ 259 (337)
T 3ll6_A 180 CDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL 259 (337)
T ss_dssp CCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------
T ss_pred ecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH
Confidence 999999876543221 1134689999999988 5667889999999999999999999998632211
Q ss_pred ccccchhhhhhhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 648 SSSSSNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
........ .+.... .+..+.+++.+||+.||++||++.|+++.|+
T Consensus 260 --------~~~~~~~~--~~~~~~----~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 304 (337)
T 3ll6_A 260 --------RIVNGKYS--IPPHDT----QYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ 304 (337)
T ss_dssp --------------CC--CCTTCC----SSGGGHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred --------HhhcCccc--CCcccc----cchHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 11111111 111111 1223788999999999999999999999875
No 221
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=329.68 Aligned_cols=260 Identities=25% Similarity=0.400 Sum_probs=204.3
Q ss_pred hcCCCCCceeeecCCeeEEEEE-----cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCC-
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAE-----LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHAR- 508 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~- 508 (707)
.++|++.+.||+|+||.||+++ ..+|+.||+|++.... ....+.+.+|++++++++||||+++++++...+
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 116 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 116 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC---SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC---
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC---HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCC
Confidence 4568999999999999999997 3468999999987532 234567899999999999999999999886544
Q ss_pred -ceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEecccc
Q 038671 509 -HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGT 587 (707)
Q Consensus 509 -~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~ 587 (707)
..++||||+++++|.+++... ...+++..++.++.|++.||+|||+. |++||||||+||+++.++.+||+|||+
T Consensus 117 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~ 191 (326)
T 2w1i_A 117 RNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL 191 (326)
T ss_dssp -CCEEEECCCTTCBHHHHHHHS--TTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTT
T ss_pred CceEEEEECCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcc
Confidence 789999999999999999653 24589999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCC---ccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccc-------ccccchh-hh
Q 038671 588 AKFLKPDSSN---WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSI-------SSSSSNL-EI 656 (707)
Q Consensus 588 ~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~-------~~~~~~~-~~ 656 (707)
+......... .....++..|+|||.+.+..++.++||||||+++|+|+||..||...... ....... ..
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (326)
T 2w1i_A 192 TKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 271 (326)
T ss_dssp CEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHH
T ss_pred hhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHH
Confidence 9876544321 12235677899999999888999999999999999999999997532100 0000000 01
Q ss_pred hhhhhcC-CCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 657 ALNEMLD-PRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 657 ~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
....... .+.+.+. ..+.++.+++.+||+.||++||++.++++.|+
T Consensus 272 ~~~~~~~~~~~~~~~----~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~ 318 (326)
T 2w1i_A 272 LIELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 318 (326)
T ss_dssp HHHHHHTTCCCCCCT----TCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HHHHhhcCCCCCCCC----cccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111111 1222222 23456899999999999999999999999875
No 222
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=3.5e-39 Score=337.40 Aligned_cols=256 Identities=21% Similarity=0.325 Sum_probs=183.6
Q ss_pred HhcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecC-----
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHA----- 507 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~----- 507 (707)
..++|++.+.||+|+||.||+|. ..+|+.||+|++...... ......+.+|+++++.++||||+++++++...
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 105 (367)
T 2fst_X 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 105 (367)
T ss_dssp EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSS-HHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGG
T ss_pred CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCcccc
Confidence 35789999999999999999995 567999999998764332 33556788999999999999999999998654
Q ss_pred -CceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccc
Q 038671 508 -RHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFG 586 (707)
Q Consensus 508 -~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg 586 (707)
...++|+|++ +++|.+++.. +.+++..++.++.||++||+|||+. ||+||||||+||+++.++.+||+|||
T Consensus 106 ~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG 177 (367)
T 2fst_X 106 FNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 177 (367)
T ss_dssp CCCCEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC--
T ss_pred CCeEEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecc
Confidence 5679999998 6899988853 3589999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCccccccccCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCcccccccccch------------
Q 038671 587 TAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSN------------ 653 (707)
Q Consensus 587 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~------------ 653 (707)
+++..... .....||+.|+|||.+.+ ..++.++||||+||++|||++|+.||............
T Consensus 178 ~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~ 254 (367)
T 2fst_X 178 LARHTADE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 254 (367)
T ss_dssp ----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHH
T ss_pred cccccccc---CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 99865432 344678999999999876 67899999999999999999999999643321100000
Q ss_pred -------hhhhhhhhcCCCCCCCC--cchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 654 -------LEIALNEMLDPRLPTPS--HNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 654 -------~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
........ +..+... ......+..+.+++.+||..||++|||+.|+++
T Consensus 255 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 255 KKISSESARNYIQSL--TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp TTCCCHHHHHHHHTS--CCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHhhhHHHHHHHhcc--CCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 00000000 0011000 000112356889999999999999999999986
No 223
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=9.6e-39 Score=337.93 Aligned_cols=258 Identities=21% Similarity=0.275 Sum_probs=195.8
Q ss_pred hcCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCC------
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHAR------ 508 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 508 (707)
..+|++.+.||+|+||.||+|+...+..+|+|++...... ..+|+++++.++||||+++++++...+
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~-------~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~ 111 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF-------KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEV 111 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS-------CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch-------HHHHHHHHHhCCCCCcceEEEEEEecCCCCCce
Confidence 4579999999999999999998877777999988653221 236899999999999999999985443
Q ss_pred ceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeec-CCCCeEEecccc
Q 038671 509 HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLD-LENEAHVSDFGT 587 (707)
Q Consensus 509 ~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~-~~~~~kl~Dfg~ 587 (707)
..++||||++++.+............+++..++.++.||++||+|||++ ||+||||||+||+++ .++.+||+|||+
T Consensus 112 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~ 188 (394)
T 4e7w_A 112 FLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGS 188 (394)
T ss_dssp EEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCC
Confidence 3789999998876655544333445699999999999999999999999 999999999999999 799999999999
Q ss_pred ceecCCCCCCccccccccCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCcccccccccch-----------hh
Q 038671 588 AKFLKPDSSNWAELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSN-----------LE 655 (707)
Q Consensus 588 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~-----------~~ 655 (707)
++....... .....||+.|+|||.+.+. .++.++||||+||++|||++|+.||............ ..
T Consensus 189 a~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~ 267 (394)
T 4e7w_A 189 AKILIAGEP-NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIK 267 (394)
T ss_dssp CEECCTTCC-CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred cccccCCCC-CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 987654433 3446789999999998764 5899999999999999999999999753321100000 00
Q ss_pred hhhhhhcCCCCCCCCcc------hHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 656 IALNEMLDPRLPTPSHN------VQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 656 ~~~~~~~~~~~~~~~~~------~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
..........++..... ....+.++.+++.+||+.||++|||+.|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 268 TMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp HHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 00011111112111100 0113456899999999999999999999986
No 224
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=3.1e-39 Score=337.29 Aligned_cols=255 Identities=22% Similarity=0.362 Sum_probs=204.2
Q ss_pred hcCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchh--------------hhHHHHHHHHHHHhcCCCCceeee
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEM--------------ASQQEFLNEVKTLTGIRHRNIVKF 500 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~--------------~~~~~~~~e~~~l~~l~h~niv~~ 500 (707)
.++|++.+.||+|+||.||+|.. +|+.||+|++........ ...+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46899999999999999999987 899999999864211110 012678999999999999999999
Q ss_pred eeeeecCCceeEEEeeeccCcHHHH------HhcccccCCCChHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCCCee
Q 038671 501 YGFCSHARHSFIVYEYLEMGSLAMI------LSNDAAAKDLGWTKRMNVIKGVVDALSYMHN-DCFPPIVHRDISSKNVL 573 (707)
Q Consensus 501 ~~~~~~~~~~~lv~e~~~~~~L~~~------l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~dlk~~Nil 573 (707)
++++.+.+..++||||+++++|.++ +.. .....+++..++.++.|++.||+|||+ . |++||||||+||+
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~-~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil 184 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDK-NYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNIL 184 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCS-SSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhh-ccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEE
Confidence 9999999999999999999999988 532 124568999999999999999999999 8 9999999999999
Q ss_pred ecCCCCeEEeccccceecCCCCCCccccccccCCCCccccccC-CCCc-cchhHHHHHHHHHHHhCCCCCCccccccccc
Q 038671 574 LDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTM-KVTE-KCDVYSFGVLALEVIKGKHPRDFISSISSSS 651 (707)
Q Consensus 574 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~-~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~ 651 (707)
++.++.+||+|||.+...... ......|++.|+|||.+.+. .++. ++||||||+++|+|++|+.||......
T Consensus 185 ~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---- 258 (348)
T 2pml_X 185 MDKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL---- 258 (348)
T ss_dssp ECTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS----
T ss_pred EcCCCcEEEeccccccccccc--cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH----
Confidence 999999999999999876433 33456789999999999877 5666 999999999999999999999643220
Q ss_pred chhhhhhhhhcCCCCCCCCc---------------chHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 652 SNLEIALNEMLDPRLPTPSH---------------NVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
......+.......+.. .....+.++.+++.+||+.||.+||++.|+++
T Consensus 259 ---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 259 ---VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp ---HHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ---HHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11122222221111100 00233456899999999999999999999986
No 225
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.2e-38 Score=355.85 Aligned_cols=246 Identities=27% Similarity=0.412 Sum_probs=195.6
Q ss_pred ceeeecCCeeEEEEEc---CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEEEeeec
Q 038671 442 HCIGKGGQGSVYKAEL---PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIVYEYLE 518 (707)
Q Consensus 442 ~~lg~G~~g~vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 518 (707)
+.||+|+||.||+|.. ..++.||||++.... ......+++.+|++++++++||||+++++++.. +..++||||+.
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~ 452 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAE 452 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGG-GCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccC
Confidence 4799999999999943 356889999987542 222345789999999999999999999999964 56889999999
Q ss_pred cCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCCC-
Q 038671 519 MGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSN- 597 (707)
Q Consensus 519 ~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~- 597 (707)
+|+|.+++... +.+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++........
T Consensus 453 ~g~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 453 LGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp TEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCCHHHHHhhC---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 99999999643 4589999999999999999999999 9999999999999999999999999999876544321
Q ss_pred --ccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchhhhhhhhhcCCCCCCCCcchH
Q 038671 598 --WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHNVQ 674 (707)
Q Consensus 598 --~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (707)
.....+|+.|+|||++.+..++.++||||||+++|||++ |+.||..... ......+.... +...+.
T Consensus 527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~-----~~~~~~i~~~~--~~~~p~---- 595 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG-----SEVTAMLEKGE--RMGCPA---- 595 (635)
T ss_dssp --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH-----HHHHHHHHTTC--CCCCCT----
T ss_pred ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHcCC--CCCCCC----
Confidence 223346788999999999999999999999999999998 9999964322 11112222222 222222
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 675 DKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 675 ~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
..+.++.+++..||+.||++||++++|++.|+
T Consensus 596 ~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~ 627 (635)
T 4fl3_A 596 GCPREMYDLMNLCWTYDVENRPGFAAVELRLR 627 (635)
T ss_dssp TCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 23456899999999999999999999999875
No 226
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.1e-38 Score=326.29 Aligned_cols=252 Identities=25% Similarity=0.405 Sum_probs=194.3
Q ss_pred HhcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeec------
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSH------ 506 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------ 506 (707)
+.++|++.+.||+|+||.||+|+. .+|+.||+|++.. .....+.+.+|+.++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 79 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH----TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVK 79 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE----EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec----cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhh
Confidence 456799999999999999999964 5799999999853 23345778999999999999999999998754
Q ss_pred -------CCceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCC
Q 038671 507 -------ARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENE 579 (707)
Q Consensus 507 -------~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~ 579 (707)
.+..++||||+++++|.+++.... ..+++..++.++.|++.||+|||++ |++||||||+||+++.++.
T Consensus 80 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~ 154 (303)
T 1zy4_A 80 PMTAVKKKSTLFIQMEYCENGTLYDLIHSEN--LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRN 154 (303)
T ss_dssp ------CEEEEEEEEECCCSCBHHHHHHHSC--GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSC
T ss_pred hhcccccCCceEEEEecCCCCCHHHhhhccc--cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCC
Confidence 457899999999999999996432 3578899999999999999999999 9999999999999999999
Q ss_pred eEEeccccceecCCCC--------------CCccccccccCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCcc
Q 038671 580 AHVSDFGTAKFLKPDS--------------SNWAELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFI 644 (707)
Q Consensus 580 ~kl~Dfg~~~~~~~~~--------------~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~ 644 (707)
+||+|||.+....... .......|++.|+|||.+.+. .++.++||||||+++|+|++ ||...
T Consensus 155 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~ 231 (303)
T 1zy4_A 155 VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG 231 (303)
T ss_dssp EEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH
T ss_pred EEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc
Confidence 9999999997654321 122345689999999998764 68999999999999999998 54311
Q ss_pred cccccccchhhhhhhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 645 SSISSSSSNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
.........+.......+.......+..+.+++.+||+.||.+|||+.++++.
T Consensus 232 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 232 -------MERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp -------HHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -------hhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 11111222222222222222223344568899999999999999999999874
No 227
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=3e-39 Score=339.13 Aligned_cols=272 Identities=20% Similarity=0.273 Sum_probs=199.6
Q ss_pred chHHHHHHHhcCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCc--------hhhhHHHHHHHHHHHhcCCCCce
Q 038671 426 IVYEEIIRVTNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPS--------EMASQQEFLNEVKTLTGIRHRNI 497 (707)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~~~~e~~~l~~l~h~ni 497 (707)
....++..+.++|++.+.||+|+||.||+|...+|+.||||++...... .....+.+.+|++++++++||||
T Consensus 12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 3456778889999999999999999999998888999999998643221 12234678999999999999999
Q ss_pred eeeeeeeec-----CCceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCe
Q 038671 498 VKFYGFCSH-----ARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNV 572 (707)
Q Consensus 498 v~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Ni 572 (707)
+++++++.. ....++||||+. |+|.+++... ...+++..++.++.||+.||+|||+. ||+||||||+||
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NI 165 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ--RIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNI 165 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGE
T ss_pred cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHE
Confidence 999999843 346799999998 5777777533 34689999999999999999999999 999999999999
Q ss_pred eecCCCCeEEeccccceecCCCCCCccccccccCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCccccccccc
Q 038671 573 LLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSS 651 (707)
Q Consensus 573 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~ 651 (707)
+++.++.+||+|||++....... ......|++.|+|||.+.+ ..++.++||||||+++|+|++|+.||..........
T Consensus 166 l~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~ 244 (362)
T 3pg1_A 166 LLADNNDITICDFNLAREDTADA-NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLN 244 (362)
T ss_dssp EECTTCCEEECCTTC----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred EEcCCCCEEEEecCccccccccc-ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 99999999999999997544332 2344578999999998876 668999999999999999999999997432111000
Q ss_pred chhh---------------hhhhhhcCCCCC-CCCcc----hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 652 SNLE---------------IALNEMLDPRLP-TPSHN----VQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 652 ~~~~---------------~~~~~~~~~~~~-~~~~~----~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
.... ............ .+... .+..+..+.+++.+||+.||++|||+.|+++.
T Consensus 245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 245 KIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 0000 000000101110 11111 11224568899999999999999999999863
No 228
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.3e-38 Score=334.18 Aligned_cols=260 Identities=22% Similarity=0.293 Sum_probs=199.4
Q ss_pred HhcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecC-----
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHA----- 507 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~----- 507 (707)
..++|++.+.||+|+||.||+|. ..+++.||+|++.... .....+.+.+|++++++++||||+++++++...
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 102 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQM 102 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT--CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTC
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc--CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCcccc
Confidence 34689999999999999999995 4578899999987532 233456789999999999999999999998654
Q ss_pred CceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEecccc
Q 038671 508 RHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGT 587 (707)
Q Consensus 508 ~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~ 587 (707)
...++||||+. ++|.+++.. ..+++..++.++.||+.||+|||+. ||+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~iv~e~~~-~~L~~~l~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 174 (364)
T 3qyz_A 103 KDVYIVQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGL 174 (364)
T ss_dssp CCEEEEEECCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEcccC-cCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcc
Confidence 46899999997 589888853 3589999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCC---CccccccccCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchh---------
Q 038671 588 AKFLKPDSS---NWAELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNL--------- 654 (707)
Q Consensus 588 ~~~~~~~~~---~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~--------- 654 (707)
+........ ......||+.|+|||++.+ ..++.++||||+|+++|+|++|+.||.............
T Consensus 175 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 254 (364)
T 3qyz_A 175 ARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254 (364)
T ss_dssp CEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHH
T ss_pred eEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 987653322 1244589999999998654 458999999999999999999999996433211000000
Q ss_pred ----------hhhhhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 655 ----------EIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 655 ----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
......................+.++.+++.+||+.||++|||+.|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000000000000000001122456889999999999999999999986
No 229
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=3.7e-38 Score=341.83 Aligned_cols=343 Identities=20% Similarity=0.230 Sum_probs=300.1
Q ss_pred ceeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCc-ccCCccccCCCCCCeeeccc
Q 038671 6 AFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALS-GAIPKEYGNLVKLTLLTLEN 84 (707)
Q Consensus 6 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~-~~~~~~~~~l~~L~~L~l~~ 84 (707)
+.++.++++++ .+|. +. ++|++|+|++|++++..|..|.++++|++|+|++|.+. ...+..|.++++|++|+|++
T Consensus 13 ~~~~c~~~~l~-~lp~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~ 88 (455)
T 3v47_A 13 YNAICINRGLH-QVPE-LP--AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDY 88 (455)
T ss_dssp TEEECCSSCCS-SCCC-CC--TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTT
T ss_pred cccCcCCCCcc-cCCC-CC--CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCC
Confidence 46888899998 6676 43 69999999999999888999999999999999999997 35578899999999999999
Q ss_pred ccccccC-CCCCCCCCccEEEeccCccccc--cCccccCCCCCcEEEcccccccccCCCC-CCCCCCCcEEEcCCCccCC
Q 038671 85 NQLRGPI-PNLRNLTSLVRVRLNQNHLTGN--ISESFGIHPNLAFIDLSHNYFYGEISSD-WGRCPKLGTLDFSSNNITG 160 (707)
Q Consensus 85 n~i~~~~-~~l~~l~~L~~L~l~~n~l~~~--~~~~~~~~~~L~~L~L~~n~i~~~~~~~-~~~~~~L~~L~L~~n~i~~ 160 (707)
|.+.... ..+.++++|++|++++|++++. ....|..+++|++|+|++|.++.+.+.. +..+++|++|++++|.+++
T Consensus 89 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~ 168 (455)
T 3v47_A 89 NQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKS 168 (455)
T ss_dssp CTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSC
T ss_pred CccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccc
Confidence 9998874 4699999999999999999873 3445899999999999999999887765 8999999999999999998
Q ss_pred CCchhhhCC--CCCCEEeCCCCCCCCCCChh--------hhCCCCCcEEEecCCccccCCccccC---------------
Q 038671 161 SMPAEIIHS--SQLKVLDLSSNHIVGEMPSK--------LGKLSSLIKLILNSNQLCGQLSLELG--------------- 215 (707)
Q Consensus 161 ~~~~~~~~~--~~L~~L~l~~n~l~~~~~~~--------~~~l~~L~~L~l~~n~l~~~~~~~~~--------------- 215 (707)
..+..+..+ .+|+.|++++|.+.+..+.. +..+++|++|++++|.+++..+..+.
T Consensus 169 ~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~ 248 (455)
T 3v47_A 169 ICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSN 248 (455)
T ss_dssp CCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTT
T ss_pred cChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeecc
Confidence 888888776 78999999999998655443 33668999999999998754443321
Q ss_pred ------------------------CCCcccEEEccCCccCCCCCccccCcccCceEeeecccccccCchhhhhcccCCee
Q 038671 216 ------------------------SLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSEL 271 (707)
Q Consensus 216 ------------------------~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 271 (707)
..++|++|++++|.+++..+..|..+++|+.|+|++|.+.+..+..|.++++|+.|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 328 (455)
T 3v47_A 249 SYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKL 328 (455)
T ss_dssp CTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred ccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEE
Confidence 12689999999999998899999999999999999999999989999999999999
Q ss_pred eecCccCCCCCCcccccccccceEeccccccCCchhHhhccCCCceeEeeccCcccccCCCc-cccccCchhhcccCcCc
Q 038671 272 DLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDISYNELHGSIPNS-TAFRDAPMEALQGNKGL 350 (707)
Q Consensus 272 ~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~-~~~~~~~~~~~~~~~~~ 350 (707)
++++|.+++..+..+..+++|+.|++++|++++..|..+..+++|+.|++++|++++.++.. ..+.......+.+|+..
T Consensus 329 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 408 (455)
T 3v47_A 329 NLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 408 (455)
T ss_dssp ECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcc
Confidence 99999998888889999999999999999999888999999999999999999999877654 45667777888899887
Q ss_pred CC
Q 038671 351 CG 352 (707)
Q Consensus 351 c~ 352 (707)
|.
T Consensus 409 ~~ 410 (455)
T 3v47_A 409 CS 410 (455)
T ss_dssp CC
T ss_pred cC
Confidence 64
No 230
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=2.2e-38 Score=341.14 Aligned_cols=257 Identities=19% Similarity=0.281 Sum_probs=202.4
Q ss_pred hcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCC-CceeeeeeeeecCCceeE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH-RNIVKFYGFCSHARHSFI 512 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~~l 512 (707)
.++|++.+.||+|+||.||+|. ..+++.||||++...... ..+.+|+++++.++| ++++.+..++...+..++
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~-----~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~l 80 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-----PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVL 80 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS-----CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEE
Confidence 4789999999999999999996 467999999987654322 347789999999976 666667777788888999
Q ss_pred EEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeee---cCCCCeEEeccccce
Q 038671 513 VYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLL---DLENEAHVSDFGTAK 589 (707)
Q Consensus 513 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~---~~~~~~kl~Dfg~~~ 589 (707)
||||+ +++|.+++... .+.+++..++.++.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||+++
T Consensus 81 vme~~-g~sL~~ll~~~--~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (483)
T 3sv0_A 81 VMDLL-GPSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (483)
T ss_dssp EEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EEECC-CCCHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcce
Confidence 99999 99999999632 34699999999999999999999999 99999999999999 578999999999998
Q ss_pred ecCCCCCC-------ccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhc
Q 038671 590 FLKPDSSN-------WAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEML 662 (707)
Q Consensus 590 ~~~~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 662 (707)
........ .....||+.|+|||.+.+..++.++||||||+++|||++|+.||........ ............
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~-~~~~~~i~~~~~ 233 (483)
T 3sv0_A 155 KYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK-KQKYEKISEKKV 233 (483)
T ss_dssp ECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSH-HHHHHHHHHHHH
T ss_pred eccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhH-HHHHHHHhhccc
Confidence 76644321 2256799999999999999999999999999999999999999975332110 111111111111
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 663 DPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 663 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
..... ......+.++.+++..||+.||++||++++|++.|+
T Consensus 234 ~~~~~---~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~ 274 (483)
T 3sv0_A 234 ATSIE---ALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFR 274 (483)
T ss_dssp HSCHH---HHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred cccHH---HHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 10000 001122456899999999999999999999998874
No 231
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.6e-38 Score=339.72 Aligned_cols=197 Identities=20% Similarity=0.305 Sum_probs=169.9
Q ss_pred hcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcC------CCCceeeeeeeeecC
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI------RHRNIVKFYGFCSHA 507 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~~~~~~~~~ 507 (707)
..+|++.+.||+|+||.||+|. ..+++.||||++... ......+.+|+++++.+ +|+||+++++++...
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 171 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE----KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR 171 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEET
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc----cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccC
Confidence 4679999999999999999995 556899999998643 22345566777777766 578999999999999
Q ss_pred CceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCC--eEEecc
Q 038671 508 RHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENE--AHVSDF 585 (707)
Q Consensus 508 ~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~--~kl~Df 585 (707)
+..++||||+. ++|.+++.... ...+++..++.++.||+.||+|||+. +|+||||||+||+++.++. +||+||
T Consensus 172 ~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DF 246 (429)
T 3kvw_A 172 NHICMTFELLS-MNLYELIKKNK-FQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDF 246 (429)
T ss_dssp TEEEEEECCCC-CBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCC
T ss_pred CeEEEEEeccC-CCHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeec
Confidence 99999999996 68888886543 24589999999999999999999999 9999999999999999887 999999
Q ss_pred ccceecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 038671 586 GTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDF 643 (707)
Q Consensus 586 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~ 643 (707)
|++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 247 G~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~ 301 (429)
T 3kvw_A 247 GSSCYEHQR---VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPG 301 (429)
T ss_dssp TTCEETTCC---CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccceecCCc---ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCC
Confidence 999765432 3346889999999999999999999999999999999999999964
No 232
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.8e-38 Score=350.70 Aligned_cols=348 Identities=21% Similarity=0.199 Sum_probs=252.9
Q ss_pred CCCceeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeec
Q 038671 3 SNLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTL 82 (707)
Q Consensus 3 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l 82 (707)
+++++|+|++|.+++..+..|.++++|++|+|++|++++..++.|.++++|++|+|++|.+++..|..|+++++|++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 35777777777777777777777777777777777777666677777777777777777777776777777777777777
Q ss_pred ccccccccCC-CCCCCCCccEEEeccCccccc-cCccccCCCCCcEEEcccccccccCCCCCC-----------------
Q 038671 83 ENNQLRGPIP-NLRNLTSLVRVRLNQNHLTGN-ISESFGIHPNLAFIDLSHNYFYGEISSDWG----------------- 143 (707)
Q Consensus 83 ~~n~i~~~~~-~l~~l~~L~~L~l~~n~l~~~-~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~----------------- 143 (707)
++|.++.+++ .+.++++|++|++++|.++.+ .+..|+.+++|++|++++|.++.+.+..+.
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n 187 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCC
Confidence 7777776655 477777777777777777764 356677777777777777766544332222
Q ss_pred --------------------------------------------------------------------------------
Q 038671 144 -------------------------------------------------------------------------------- 143 (707)
Q Consensus 144 -------------------------------------------------------------------------------- 143 (707)
T Consensus 188 ~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~ 267 (570)
T 2z63_A 188 PMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYL 267 (570)
T ss_dssp CCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEET
T ss_pred CceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcc
Confidence
Q ss_pred ------------CCCCCcEEEcCCCccCCCCchhh------------------------------------------hCC
Q 038671 144 ------------RCPKLGTLDFSSNNITGSMPAEI------------------------------------------IHS 169 (707)
Q Consensus 144 ------------~~~~L~~L~L~~n~i~~~~~~~~------------------------------------------~~~ 169 (707)
.+++|++|++++|.++. .+..+ ..+
T Consensus 268 ~~~~~~~~~~~~~l~~L~~L~l~~~~l~~-l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~ 346 (570)
T 2z63_A 268 DYYLDDIIDLFNCLTNVSSFSLVSVTIER-VKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDL 346 (570)
T ss_dssp TEEESCSTTTTGGGTTCSEEEEESCEECS-CCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBC
T ss_pred hhhhhhchhhhcCcCcccEEEecCccchh-hhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCccccccccccC
Confidence 23445555555444442 22111 234
Q ss_pred CCCCEEeCCCCCCCCCC--ChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCC-ccccCcccCce
Q 038671 170 SQLKVLDLSSNHIVGEM--PSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIP-KSLGNLVKLHY 246 (707)
Q Consensus 170 ~~L~~L~l~~n~l~~~~--~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~-~~l~~l~~L~~ 246 (707)
++|+.|++++|.+++.. +..+..+++|++|++++|.+++..+. +..+++|++|++++|.+++..+ ..+.++++|++
T Consensus 347 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 425 (570)
T 2z63_A 347 PSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 425 (570)
T ss_dssp TTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCE
T ss_pred CCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCE
Confidence 55666666666665332 55666777777777777777754443 7788888888888888876655 56788888999
Q ss_pred EeeecccccccCchhhhhcccCCeeeecCccCC-CCCCcccccccccceEeccccccCCchhHhhccCCCceeEeeccCc
Q 038671 247 LNLSNNQFIKKIPVELEKLIHLSELDLSHNFLG-EEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDISYNE 325 (707)
Q Consensus 247 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~l~~n~ 325 (707)
|++++|.+.+..+..+.++++|+.|++++|.++ +..|..+..+++|+.|++++|++++..|..+..+++|+.|++++|+
T Consensus 426 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 505 (570)
T 2z63_A 426 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQ 505 (570)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCc
Confidence 999999888888888888899999999999886 4678888889999999999999988878888889999999999999
Q ss_pred ccccCCC-ccccccCchhhcccCcCcCC
Q 038671 326 LHGSIPN-STAFRDAPMEALQGNKGLCG 352 (707)
Q Consensus 326 ~~~~~~~-~~~~~~~~~~~~~~~~~~c~ 352 (707)
+++.++. ...+.......+.+|+..|.
T Consensus 506 l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 533 (570)
T 2z63_A 506 LKSVPDGIFDRLTSLQKIWLHTNPWDCS 533 (570)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCCCCHHHhhcccCCcEEEecCCcccCC
Confidence 9887765 34456666777788877663
No 233
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.9e-38 Score=330.06 Aligned_cols=255 Identities=23% Similarity=0.389 Sum_probs=198.2
Q ss_pred HhcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHH-HhcCCCCceeeeeeeeecCCcee
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKT-LTGIRHRNIVKFYGFCSHARHSF 511 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~ 511 (707)
..++|++.+.||+|+||.||+|. ..+|+.||||++....... ...++..|... ++.++||||+++++++..++..+
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~ 126 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQ--EQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVW 126 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCH--HHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcH--HHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEE
Confidence 35678889999999999999996 4679999999987653332 33445555554 77889999999999999999999
Q ss_pred EEEeeeccCcHHHHHhcc-cccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEecccccee
Q 038671 512 IVYEYLEMGSLAMILSND-AAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKF 590 (707)
Q Consensus 512 lv~e~~~~~~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~ 590 (707)
+||||+++ +|.+++... .....+++..++.++.||+.||+|||++. ||+||||||+||+++.++.+||+|||++..
T Consensus 127 lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 203 (340)
T 3an0_A 127 ICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGY 203 (340)
T ss_dssp EEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHH
T ss_pred EEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCcee
Confidence 99999986 898887532 12356899999999999999999999742 899999999999999999999999999987
Q ss_pred cCCCCCCccccccccCCCCccccc----cCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCC
Q 038671 591 LKPDSSNWAELAGTYGYVAPELAY----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRL 666 (707)
Q Consensus 591 ~~~~~~~~~~~~g~~~y~aPE~~~----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (707)
.... .......||+.|+|||++. +..++.++||||||+++|||++|+.||+.... ..............
T Consensus 204 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~------~~~~~~~~~~~~~~ 276 (340)
T 3an0_A 204 LVDS-VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT------PFQQLKQVVEEPSP 276 (340)
T ss_dssp HSCH-HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSC------HHHHHHHHHHSCCC
T ss_pred cccc-cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccc------hHHHHHHHhcCCCC
Confidence 6432 1123347899999999964 34688999999999999999999999963211 11111111111111
Q ss_pred CCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 667 PTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 667 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
..+. ...+.++.+++.+||+.||++||++.|+++
T Consensus 277 ~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 277 QLPA---DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp CCCG---GGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCc---ccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 1111 123456899999999999999999999986
No 234
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=3.1e-38 Score=331.78 Aligned_cols=258 Identities=20% Similarity=0.307 Sum_probs=196.7
Q ss_pred HhcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCce--
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHS-- 510 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~-- 510 (707)
+.++|.+.+.||+|+||.||+|. ..+|+.||+|++...... ......+.+|+.+++.++||||+++++++...+..
T Consensus 40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 118 (371)
T 4exu_A 40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQS-EIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRN 118 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSS-HHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTT
T ss_pred ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccc-hhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccc
Confidence 35789999999999999999995 557999999999765433 23457788999999999999999999999876654
Q ss_pred ----eEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccc
Q 038671 511 ----FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFG 586 (707)
Q Consensus 511 ----~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg 586 (707)
++||||+. ++|.+.+. ..+++..++.++.||+.||+|||+. ||+||||||+||+++.++.+||+|||
T Consensus 119 ~~~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg 189 (371)
T 4exu_A 119 FYDFYLVMPFMQ-TDLQKIMG-----MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFG 189 (371)
T ss_dssp CCCCEEEEECCC-EEHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTT
T ss_pred ceeEEEEEcccc-ccHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecC
Confidence 99999997 58887763 3489999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCccccccccCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCcccccccccch------------
Q 038671 587 TAKFLKPDSSNWAELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSN------------ 653 (707)
Q Consensus 587 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~------------ 653 (707)
++...... .....||+.|+|||.+.+ ..++.++||||||+++|+|++|+.||............
T Consensus 190 ~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 266 (371)
T 4exu_A 190 LARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFV 266 (371)
T ss_dssp CC-----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred cccccccC---cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHH
Confidence 99865432 344578999999999887 67899999999999999999999999743211100000
Q ss_pred -------hhhhhhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 654 -------LEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 654 -------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
.......................+.++.+++.+||+.||++|||++|+++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 267 QKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp TTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 000000000000000000011224568999999999999999999999863
No 235
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=6e-37 Score=349.56 Aligned_cols=328 Identities=25% Similarity=0.281 Sum_probs=169.1
Q ss_pred CceeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcc-----cCC----ccccCCC
Q 038671 5 LAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSG-----AIP----KEYGNLV 75 (707)
Q Consensus 5 l~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~-----~~~----~~~~~l~ 75 (707)
|++|+|++|.+++..|..|+.+++|++|+|++|++++..+..|.++++|++|++++|...+ .+| ..|..++
T Consensus 250 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~ 329 (680)
T 1ziw_A 250 LTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLK 329 (680)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCT
T ss_pred CCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCC
Confidence 5555555555555555555555555555555555554444444444444444444332211 011 1344444
Q ss_pred CCCeeecccccccccCCC-CCCCCCccEEEecc----------------------------CccccccCccccCCCCCcE
Q 038671 76 KLTLLTLENNQLRGPIPN-LRNLTSLVRVRLNQ----------------------------NHLTGNISESFGIHPNLAF 126 (707)
Q Consensus 76 ~L~~L~l~~n~i~~~~~~-l~~l~~L~~L~l~~----------------------------n~l~~~~~~~~~~~~~L~~ 126 (707)
+|++|++++|.+..+.+. +.++++|++|++++ |+++.+.+..|..+++|+.
T Consensus 330 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 409 (680)
T 1ziw_A 330 CLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEV 409 (680)
T ss_dssp TCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred CCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCE
Confidence 455555555555443332 44444444444443 3333333444444444444
Q ss_pred EEccccccccc-CCCCCCCCCCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCC--CCCChhhhCCCCCcEEEecC
Q 038671 127 IDLSHNYFYGE-ISSDWGRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIV--GEMPSKLGKLSSLIKLILNS 203 (707)
Q Consensus 127 L~L~~n~i~~~-~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~--~~~~~~~~~l~~L~~L~l~~ 203 (707)
|+|++|.+++. .+..|..+++|++|++++|.+++..+..|..+++|+.|++++|.+. +..|..|..+++|+.|++++
T Consensus 410 L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~ 489 (680)
T 1ziw_A 410 LDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSN 489 (680)
T ss_dssp EECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCS
T ss_pred EeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCC
Confidence 44444444422 2234444444444444444444444444444455555555555443 23455555556666666666
Q ss_pred CccccCCccccCCCCcccEEEccCCccCCCCC--------ccccCcccCceEeeecccccccCchhhhhcccCCeeeecC
Q 038671 204 NQLCGQLSLELGSLTQLERLDLSSNRLSNSIP--------KSLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSH 275 (707)
Q Consensus 204 n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~--------~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 275 (707)
|++++..+..|..+++|++|++++|.+++..+ ..|.++++|+.|+|++|+++.+.+..|.++++|+.|++++
T Consensus 490 N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 569 (680)
T 1ziw_A 490 NNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGL 569 (680)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCC
Confidence 66665555555566666666666666553311 1245556666666666666544444566666666666666
Q ss_pred ccCCCCCCcccccccccceEeccccccCCchhHhhc-cCCCceeEeeccCcccccCCC
Q 038671 276 NFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFE-ELHGLSYIDISYNELHGSIPN 332 (707)
Q Consensus 276 n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~-~~~~L~~l~l~~n~~~~~~~~ 332 (707)
|.+++..+..|..+++|+.|++++|++++..+..+. .+++|+.|++++|+|.|.|+.
T Consensus 570 N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 570 NNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred CCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 666555555555666666666666666655555555 556666666666666666553
No 236
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.6e-38 Score=335.58 Aligned_cols=260 Identities=22% Similarity=0.276 Sum_probs=193.6
Q ss_pred HHHhcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeec----
Q 038671 432 IRVTNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSH---- 506 (707)
Q Consensus 432 ~~~~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~---- 506 (707)
....++|++.+.||+|+||.||+|. ..+|+.||+|++...... ..+|+++++.++||||+++++++..
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~-------~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 75 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY-------KNRELDIMKVLDHVNIIKLVDYFYTTGDE 75 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS-------CCHHHHHHTTCCCTTBCCEEEEEEEC---
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch-------HHHHHHHHHHcCCCCccchhheeeecCcc
Confidence 3456789999999999999999995 568999999998654221 2369999999999999999999843
Q ss_pred ----------------------------------CCceeEEEeeeccCcHHHHHhcc-cccCCCChHHHHHHHHHHHHHH
Q 038671 507 ----------------------------------ARHSFIVYEYLEMGSLAMILSND-AAAKDLGWTKRMNVIKGVVDAL 551 (707)
Q Consensus 507 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l 551 (707)
....++||||++ ++|.+.+... .....+++..++.++.||++||
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL 154 (383)
T 3eb0_A 76 EPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAV 154 (383)
T ss_dssp ----------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 334889999998 4777766432 2235689999999999999999
Q ss_pred HHHHhCCCCCeEecCCCCCCeeec-CCCCeEEeccccceecCCCCCCccccccccCCCCccccccCC-CCccchhHHHHH
Q 038671 552 SYMHNDCFPPIVHRDISSKNVLLD-LENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMK-VTEKCDVYSFGV 629 (707)
Q Consensus 552 ~~LH~~~~~~ivH~dlk~~Nil~~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~slG~ 629 (707)
+|||+. ||+||||||+||+++ .++.+||+|||+++....... .....||+.|+|||.+.+.. ++.++||||+|+
T Consensus 155 ~~LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~ 230 (383)
T 3eb0_A 155 GFIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP-SVAYICSRFYRAPELMLGATEYTPSIDLWSIGC 230 (383)
T ss_dssp HHHHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC-CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHH
T ss_pred HHHHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC-CcCcccCCCccCHHHhcCCCCCCcchhhhhHHH
Confidence 999999 999999999999997 688999999999987654432 34457899999999887654 899999999999
Q ss_pred HHHHHHhCCCCCCcccccccccchh--------hh---hhhhhcCCCCCCCC-cc-----hHHHHHHHHHHHHhccCCCC
Q 038671 630 LALEVIKGKHPRDFISSISSSSSNL--------EI---ALNEMLDPRLPTPS-HN-----VQDKLISIMEVAISCLDESP 692 (707)
Q Consensus 630 ~l~el~tg~~p~~~~~~~~~~~~~~--------~~---~~~~~~~~~~~~~~-~~-----~~~~~~~l~~li~~cl~~~P 692 (707)
++|||++|+.||............. +. .........++... .. ....+.++.+++.+||+.||
T Consensus 231 il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 310 (383)
T 3eb0_A 231 VFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEP 310 (383)
T ss_dssp HHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSG
T ss_pred HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCCh
Confidence 9999999999997433211000000 00 00000011111100 00 01134458899999999999
Q ss_pred CCCCCHHHHHH
Q 038671 693 ESRPTIQKVSQ 703 (707)
Q Consensus 693 ~~Rps~~~l~~ 703 (707)
++|||+.|+++
T Consensus 311 ~~R~t~~e~l~ 321 (383)
T 3eb0_A 311 DLRINPYEAMA 321 (383)
T ss_dssp GGSCCHHHHHT
T ss_pred hhCCCHHHHhc
Confidence 99999999985
No 237
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=3.2e-38 Score=326.93 Aligned_cols=254 Identities=21% Similarity=0.295 Sum_probs=198.4
Q ss_pred hcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCC-CCceeeeeeeeec--CCce
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR-HRNIVKFYGFCSH--ARHS 510 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~--~~~~ 510 (707)
.++|++.+.||+|+||.||+|. ..+++.||+|++... ..+.+.+|++++++++ ||||+++++++.. ....
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~ 108 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTP 108 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc------chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCce
Confidence 4679999999999999999995 567999999998642 2356889999999997 9999999999987 6678
Q ss_pred eEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCC-CeEEeccccce
Q 038671 511 FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLEN-EAHVSDFGTAK 589 (707)
Q Consensus 511 ~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~-~~kl~Dfg~~~ 589 (707)
++||||+.+++|.+++. .+++..++.++.||+.||+|||++ ||+||||||+||+++.++ .+||+|||++.
T Consensus 109 ~lv~e~~~~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~ 179 (330)
T 3nsz_A 109 ALVFEHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 179 (330)
T ss_dssp EEEEECCCCCCHHHHGG------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEEeccCchhHHHHHH------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCce
Confidence 99999999999999874 378899999999999999999999 999999999999999777 89999999998
Q ss_pred ecCCCCCCccccccccCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCcccccccc---------cchhhhhhh
Q 038671 590 FLKPDSSNWAELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSS---------SSNLEIALN 659 (707)
Q Consensus 590 ~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~---------~~~~~~~~~ 659 (707)
...... ......+++.|+|||.+.+ ..++.++||||||+++|+|++|+.||......... .........
T Consensus 180 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 258 (330)
T 3nsz_A 180 FYHPGQ-EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 258 (330)
T ss_dssp ECCTTC-CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHH
T ss_pred EcCCCC-ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHH
Confidence 765443 2345678999999999877 66899999999999999999999998432110000 000000000
Q ss_pred h-----------hcCCCCC------CCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 660 E-----------MLDPRLP------TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 660 ~-----------~~~~~~~------~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
. ....... .........+.++.+++.+||+.||++|||++|+++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 259 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp HTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0 0000000 0000111234568999999999999999999999873
No 238
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.8e-38 Score=328.84 Aligned_cols=253 Identities=20% Similarity=0.260 Sum_probs=172.8
Q ss_pred HhcCCCCCc-eeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeec----C
Q 038671 434 VTNDFDDEH-CIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSH----A 507 (707)
Q Consensus 434 ~~~~~~~~~-~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~ 507 (707)
+.++|++.+ .||+|+||.||+|.. .+|+.||+|++... .... .+....+..++||||+++++++.. .
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~---~e~~~~~~~~~h~~i~~~~~~~~~~~~~~ 98 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKAR---QEVDHHWQASGGPHIVCILDVYENMHHGK 98 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHH---HHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHH---HHHHHHHHhcCCCChHHHHHHHhhccCCC
Confidence 456888855 699999999999965 47999999998542 1111 222334556689999999999876 4
Q ss_pred CceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecC---CCCeEEec
Q 038671 508 RHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDL---ENEAHVSD 584 (707)
Q Consensus 508 ~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~---~~~~kl~D 584 (707)
...++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+. ||+||||||+||+++. ++.+||+|
T Consensus 99 ~~~~lv~e~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~D 174 (336)
T 3fhr_A 99 RCLLIIMECMEGGELFSRIQERG-DQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTD 174 (336)
T ss_dssp EEEEEEEECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECC
T ss_pred ceEEEEEeccCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEec
Confidence 55899999999999999997543 34689999999999999999999999 9999999999999976 44599999
Q ss_pred cccceecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCC
Q 038671 585 FGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDP 664 (707)
Q Consensus 585 fg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 664 (707)
||++...... ......+|+.|+|||.+.+..++.++||||||+++|+|++|+.||........ ...........
T Consensus 175 fg~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~~~~~~~~~ 248 (336)
T 3fhr_A 175 FGFAKETTQN--ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAI----SPGMKRRIRLG 248 (336)
T ss_dssp CTTCEEC------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------
T ss_pred cccceecccc--ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhh----hhhHHHhhhcc
Confidence 9999875532 23445789999999999888899999999999999999999999964322110 00011111111
Q ss_pred CCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 665 RLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 665 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
....+.......+.++.+++.+||+.||++|||++|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 249 QYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp --CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111111111234456899999999999999999999986
No 239
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=9.5e-38 Score=351.36 Aligned_cols=344 Identities=21% Similarity=0.202 Sum_probs=235.0
Q ss_pred CCCceeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeec
Q 038671 3 SNLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTL 82 (707)
Q Consensus 3 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l 82 (707)
++|++|+|++|.+++..+..|+++++|++|+|++|++++..|.+|.++++|++|+|++|.+++..|..|+++++|++|++
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 46788888888888777778888888888888888888777778888888888888888888777888888888888888
Q ss_pred ccccccccC-CCCCCCCCccEEEeccCcccccc-CccccCCCCCcEEEcccccccccCCCCCCCCC--------------
Q 038671 83 ENNQLRGPI-PNLRNLTSLVRVRLNQNHLTGNI-SESFGIHPNLAFIDLSHNYFYGEISSDWGRCP-------------- 146 (707)
Q Consensus 83 ~~n~i~~~~-~~l~~l~~L~~L~l~~n~l~~~~-~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~-------------- 146 (707)
++|.+..++ ..+.++++|++|++++|.++++. +..|+.+++|++|++++|.++++.+..|..++
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n 191 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLN 191 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTC
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCC
Confidence 888887766 35788888888888888887643 66778888888888888877655444332221
Q ss_pred -------------CCcEEEcCC----------------------------------------------------------
Q 038671 147 -------------KLGTLDFSS---------------------------------------------------------- 155 (707)
Q Consensus 147 -------------~L~~L~L~~---------------------------------------------------------- 155 (707)
+|++|++++
T Consensus 192 ~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~ 271 (606)
T 3vq2_A 192 PIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYT 271 (606)
T ss_dssp CCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCC
T ss_pred CcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheecccc
Confidence 222222222
Q ss_pred ---------------------------------------------CccCCCCc--------------------hhhhCCC
Q 038671 156 ---------------------------------------------NNITGSMP--------------------AEIIHSS 170 (707)
Q Consensus 156 ---------------------------------------------n~i~~~~~--------------------~~~~~~~ 170 (707)
|.++ ..+ ..+..++
T Consensus 272 ~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l~-~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~ 350 (606)
T 3vq2_A 272 NDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLK-QFPTLDLPFLKSLTLTMNKGSISFKKVALP 350 (606)
T ss_dssp TTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCCS-SCCCCCCSSCCEEEEESCSSCEECCCCCCT
T ss_pred ccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccCc-ccccCCCCccceeeccCCcCccchhhccCC
Confidence 2221 111 0122334
Q ss_pred CCCEEeCCCCCCCCC--CChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCC-ccccCcccCceE
Q 038671 171 QLKVLDLSSNHIVGE--MPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIP-KSLGNLVKLHYL 247 (707)
Q Consensus 171 ~L~~L~l~~n~l~~~--~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~-~~l~~l~~L~~L 247 (707)
+|+.|++++|.+++. .+..+..+++|++|++++|.+++ .+..+..+++|+.|++++|.+.+..+ ..+.++++|+.|
T Consensus 351 ~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 429 (606)
T 3vq2_A 351 SLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYL 429 (606)
T ss_dssp TCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEE
T ss_pred CCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEE
Confidence 555555555555433 25556666666666666666663 34566677777777777777776655 567777777777
Q ss_pred eeecccccccCchhhhhcccCCeeeecCccCCC-CCCcccccccccceEeccccccCCchhHhhccCCCceeEeeccCcc
Q 038671 248 NLSNNQFIKKIPVELEKLIHLSELDLSHNFLGE-EMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDISYNEL 326 (707)
Q Consensus 248 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~l~~n~~ 326 (707)
++++|.+.+..+..+..+++|++|++++|.+++ ..|..+..+++|+.|++++|++++..|..+..+++|+.|++++|++
T Consensus 430 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 509 (606)
T 3vq2_A 430 DISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNL 509 (606)
T ss_dssp ECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred ECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcC
Confidence 777777777677777777777777777777765 3566777777777777777777777677777777777777777777
Q ss_pred cccCCC-ccccccCchhhcccCc
Q 038671 327 HGSIPN-STAFRDAPMEALQGNK 348 (707)
Q Consensus 327 ~~~~~~-~~~~~~~~~~~~~~~~ 348 (707)
++.+|. ...+.......+.+|+
T Consensus 510 ~~~~~~~~~~l~~L~~L~l~~N~ 532 (606)
T 3vq2_A 510 LFLDSSHYNQLYSLSTLDCSFNR 532 (606)
T ss_dssp SCEEGGGTTTCTTCCEEECTTSC
T ss_pred CCcCHHHccCCCcCCEEECCCCc
Confidence 766443 2333444455555554
No 240
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=3.2e-37 Score=351.80 Aligned_cols=350 Identities=23% Similarity=0.241 Sum_probs=286.0
Q ss_pred CCCceeeccCCeeeecCCccccCCCC--CCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCee
Q 038671 3 SNLAFLYLYNNSFSGSIPSEIGRLKS--LSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLL 80 (707)
Q Consensus 3 ~~l~~L~l~~n~i~~~~~~~~~~l~~--L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 80 (707)
++|+.|++++|.+++..|..|..++. |++|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|
T Consensus 222 ~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 301 (680)
T 1ziw_A 222 TSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYL 301 (680)
T ss_dssp SCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEE
T ss_pred ccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEE
Confidence 67999999999999999999998865 9999999999998888999999999999999999999999999999999999
Q ss_pred ecccccccc------cC---C-CCCCCCCccEEEeccCccccccCccccCCCCCcEEEccccc-----------------
Q 038671 81 TLENNQLRG------PI---P-NLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNY----------------- 133 (707)
Q Consensus 81 ~l~~n~i~~------~~---~-~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~----------------- 133 (707)
++++|.... ++ . .+..+++|++|++++|.++++.+..|..+++|++|++++|.
T Consensus 302 ~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~ 381 (680)
T 1ziw_A 302 NLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHS 381 (680)
T ss_dssp ECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTS
T ss_pred eccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccC
Confidence 999875442 22 1 58899999999999999999988888888877777776654
Q ss_pred -----------ccccCCCCCCCCCCCcEEEcCCCccCCCC-chhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEe
Q 038671 134 -----------FYGEISSDWGRCPKLGTLDFSSNNITGSM-PAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLIL 201 (707)
Q Consensus 134 -----------i~~~~~~~~~~~~~L~~L~L~~n~i~~~~-~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 201 (707)
++.+.+.+|..+++|+.|+|++|.+++.. ...+.++++|+.|++++|++.+..+..|..+++|++|++
T Consensus 382 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l 461 (680)
T 1ziw_A 382 PLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLML 461 (680)
T ss_dssp CCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEEC
T ss_pred cCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchh
Confidence 44445556666777777777777765433 356666777777777777776666667777777777777
Q ss_pred cCCccc--cCCccccCCCCcccEEEccCCccCCCCCccccCcccCceEeeecccccccCc--------hhhhhcccCCee
Q 038671 202 NSNQLC--GQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIP--------VELEKLIHLSEL 271 (707)
Q Consensus 202 ~~n~l~--~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~--------~~~~~l~~L~~L 271 (707)
++|.++ +..|..+..+++|++|++++|.++++.+..|.++++|++|++++|++++... ..+.++++|+.|
T Consensus 462 ~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L 541 (680)
T 1ziw_A 462 RRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHIL 541 (680)
T ss_dssp TTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEE
T ss_pred ccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEE
Confidence 777775 3567778888999999999999988888888999999999999998876532 237888999999
Q ss_pred eecCccCCCCCCcccccccccceEeccccccCCchhHhhccCCCceeEeeccCcccccCCCcc--ccccCchhhcccCcC
Q 038671 272 DLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDISYNELHGSIPNST--AFRDAPMEALQGNKG 349 (707)
Q Consensus 272 ~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~--~~~~~~~~~~~~~~~ 349 (707)
+|++|.++...+..|..+++|+.|++++|++++..+..|..+++|+.|++++|++++.++... .+.......+.+|++
T Consensus 542 ~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~ 621 (680)
T 1ziw_A 542 NLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPF 621 (680)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCC
T ss_pred ECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCc
Confidence 999999976666678999999999999999998877888899999999999999998776532 356667778889998
Q ss_pred cCC
Q 038671 350 LCG 352 (707)
Q Consensus 350 ~c~ 352 (707)
.|.
T Consensus 622 ~c~ 624 (680)
T 1ziw_A 622 DCT 624 (680)
T ss_dssp CBC
T ss_pred ccC
Confidence 884
No 241
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=3e-38 Score=330.45 Aligned_cols=258 Identities=23% Similarity=0.340 Sum_probs=197.7
Q ss_pred HhcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecC-----
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHA----- 507 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~----- 507 (707)
+.++|++.+.||+|+||.||+|.. .+|+.||||++... ........+.+|++++++++||||+++++++...
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 86 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF--DKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENF 86 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC--SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc--ccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCcc
Confidence 356899999999999999999965 57899999998643 2233456788999999999999999999987654
Q ss_pred CceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEecccc
Q 038671 508 RHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGT 587 (707)
Q Consensus 508 ~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~ 587 (707)
...++||||+. ++|.+++.. +.+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+
T Consensus 87 ~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (353)
T 2b9h_A 87 NEVYIIQELMQ-TDLHRVIST----QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGL 158 (353)
T ss_dssp CCEEEEECCCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEeccC-ccHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccc
Confidence 67899999997 589888864 3589999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCC----------CccccccccCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCccccccccc-----
Q 038671 588 AKFLKPDSS----------NWAELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSS----- 651 (707)
Q Consensus 588 ~~~~~~~~~----------~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~----- 651 (707)
+........ ......||+.|+|||.+.+ ..++.++||||||+++|+|++|+.||..........
T Consensus 159 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 238 (353)
T 2b9h_A 159 ARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGI 238 (353)
T ss_dssp CEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred ccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHH
Confidence 987653321 1223578999999998764 678999999999999999999999996432110000
Q ss_pred ---------------chhhhhhhhhcCCCCCCC--CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 652 ---------------SNLEIALNEMLDPRLPTP--SHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 652 ---------------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
.......... +..+.. ....+..+.++.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 239 IGTPHSDNDLRCIESPRAREYIKSL--PMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp HCCCCSTTTTTTCCCHHHHHHHHTS--CCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hCCCchhccccccccchhhHHhhcc--cCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000000000 000100 0001123456889999999999999999999986
No 242
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=4e-38 Score=335.32 Aligned_cols=259 Identities=20% Similarity=0.311 Sum_probs=198.8
Q ss_pred hcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCC--------CCceeeeeeeee
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR--------HRNIVKFYGFCS 505 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~~~~~~~ 505 (707)
.++|++.+.||+|+||.||+|+ ..+++.||+|++... ....+.+.+|+++++.++ ||||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~ 111 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA----EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFK 111 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC----CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeeccee
Confidence 4789999999999999999995 567899999998642 234567889999999885 788999999987
Q ss_pred ----cCCceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCC---
Q 038671 506 ----HARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLEN--- 578 (707)
Q Consensus 506 ----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~--- 578 (707)
.....++||||+.+ ++.+.+... ....+++..++.++.||+.||+|||+++ ||+||||||+||+++.++
T Consensus 112 ~~~~~~~~~~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~ 187 (397)
T 1wak_A 112 ISGVNGTHICMVFEVLGH-HLLKWIIKS-NYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYI 187 (397)
T ss_dssp EEETTEEEEEEEECCCCC-BHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHH
T ss_pred ecCCCCceEEEEEeccCc-cHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhh
Confidence 55689999999955 554444322 2245899999999999999999999964 899999999999999775
Q ss_pred ----------------------------------------------CeEEeccccceecCCCCCCccccccccCCCCccc
Q 038671 579 ----------------------------------------------EAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPEL 612 (707)
Q Consensus 579 ----------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~ 612 (707)
.+||+|||.+...... .....||+.|+|||+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~aPE~ 264 (397)
T 1wak_A 188 RRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYRSLEV 264 (397)
T ss_dssp HHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGCCHHH
T ss_pred hhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---CccCCCCCcccCChh
Confidence 7999999999876533 334578999999999
Q ss_pred cccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccc-hhhhhhhhhcC------------------C-----CCC-
Q 038671 613 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSS-NLEIALNEMLD------------------P-----RLP- 667 (707)
Q Consensus 613 ~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~-~~~~~~~~~~~------------------~-----~~~- 667 (707)
+.+..++.++||||||+++|||++|+.||........... ........... . ...
T Consensus 265 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (397)
T 1wak_A 265 LIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITK 344 (397)
T ss_dssp HHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCC
T ss_pred hcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccc
Confidence 9999999999999999999999999999975332111000 00000000000 0 000
Q ss_pred -C----------CCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 668 -T----------PSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 668 -~----------~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
. ........+..+.+++.+||+.||++|||++|+++.
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 345 LKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred cCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 0 001234566789999999999999999999999863
No 243
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=8.8e-39 Score=329.56 Aligned_cols=254 Identities=23% Similarity=0.357 Sum_probs=197.7
Q ss_pred HhcCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEE
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIV 513 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 513 (707)
..++|++.+.||+|+||.||+|..+. .+|+|++....... ...+.+.+|+.++++++||||+++++++...+..++|
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv 107 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNE-DQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII 107 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCC-CCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEE
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCH-HHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEE
Confidence 35789999999999999999997753 48999987543221 2234577899999999999999999999999999999
Q ss_pred EeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCC
Q 038671 514 YEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKP 593 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~ 593 (707)
|||+++++|.+++... ...+++..++.++.||+.||+|||++ |++||||||+||+++ ++.+||+|||++.....
T Consensus 108 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~ 181 (319)
T 2y4i_B 108 TSLCKGRTLYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGV 181 (319)
T ss_dssp CBCCCSEEHHHHTTSS--CCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC----
T ss_pred eecccCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccccc
Confidence 9999999999999643 34689999999999999999999999 999999999999998 78999999999875432
Q ss_pred C-----CCCccccccccCCCCcccccc---------CCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhh
Q 038671 594 D-----SSNWAELAGTYGYVAPELAYT---------MKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALN 659 (707)
Q Consensus 594 ~-----~~~~~~~~g~~~y~aPE~~~~---------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 659 (707)
. ........|++.|+|||.+.+ ..++.++||||||+++|+|++|+.||..... ........
T Consensus 182 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----~~~~~~~~ 256 (319)
T 2y4i_B 182 LQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPA-----EAIIWQMG 256 (319)
T ss_dssp ------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCH-----HHHHHHHH
T ss_pred ccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHhc
Confidence 1 122334568999999998874 3478899999999999999999999964221 11111111
Q ss_pred hhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 660 EMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
....+..... ..+.++.+++.+||+.||++|||+.++++.|+
T Consensus 257 ~~~~~~~~~~-----~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~ 298 (319)
T 2y4i_B 257 TGMKPNLSQI-----GMGKEISDILLFCWAFEQEERPTFTKLMDMLE 298 (319)
T ss_dssp TTCCCCCCCS-----SCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHT
T ss_pred cCCCCCCCcC-----CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 1111211110 12234889999999999999999999999886
No 244
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=2.1e-38 Score=332.64 Aligned_cols=264 Identities=22% Similarity=0.246 Sum_probs=187.5
Q ss_pred HHHHHHhcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecC
Q 038671 429 EEIIRVTNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHA 507 (707)
Q Consensus 429 ~~~~~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 507 (707)
.+.....++|++.+.||+|+||.||+|+. .+|+.||||++...... .....++++.+..++||||+++++++...
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~l~~l~h~niv~~~~~~~~~ 91 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF----RNRELQIMQDLAVLHHPNIVQLQSYFYTL 91 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC----CCHHHHHHHHHHHHCCTTBCCEEEEEEEE
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc----cHHHHHHHHHHHhcCCCCcccHHHhhhcc
Confidence 34456678999999999999999999965 57899999988653222 23456778888888999999999998654
Q ss_pred Cc-------eeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHH--hCCCCCeEecCCCCCCeeecC-C
Q 038671 508 RH-------SFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMH--NDCFPPIVHRDISSKNVLLDL-E 577 (707)
Q Consensus 508 ~~-------~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH--~~~~~~ivH~dlk~~Nil~~~-~ 577 (707)
+. .++||||+.++.+............+++..++.++.|++.||+||| +. ||+||||||+||+++. +
T Consensus 92 ~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~ 168 (360)
T 3e3p_A 92 GERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEAD 168 (360)
T ss_dssp CSSCTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTT
T ss_pred ccccccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCC
Confidence 33 7899999987544433322233456899999999999999999999 88 9999999999999997 8
Q ss_pred CCeEEeccccceecCCCCCCccccccccCCCCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhh
Q 038671 578 NEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEI 656 (707)
Q Consensus 578 ~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~ 656 (707)
+.+||+|||++........ .....||+.|+|||.+.+.. ++.++||||||+++|+|++|+.||....... ....
T Consensus 169 ~~~kl~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~----~~~~ 243 (360)
T 3e3p_A 169 GTLKLCDFGSAKKLSPSEP-NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAG----QLHE 243 (360)
T ss_dssp TEEEECCCTTCBCCCTTSC-CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHH
T ss_pred CcEEEeeCCCceecCCCCC-cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHH----HHHH
Confidence 9999999999987654332 34457899999999986654 8999999999999999999999997432211 0111
Q ss_pred hhhhh----------cCCCCC---------CC-----CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 657 ALNEM----------LDPRLP---------TP-----SHNVQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 657 ~~~~~----------~~~~~~---------~~-----~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
..... ..+... .+ .......+.++.+++.+||+.||++|||+.|+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 244 IVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 11000 000000 00 00001134679999999999999999999999863
No 245
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=9.8e-39 Score=339.97 Aligned_cols=262 Identities=20% Similarity=0.285 Sum_probs=181.8
Q ss_pred HhcCCCC-CceeeecCCeeEEEEEcC---CCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeee--cC
Q 038671 434 VTNDFDD-EHCIGKGGQGSVYKAELP---SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCS--HA 507 (707)
Q Consensus 434 ~~~~~~~-~~~lg~G~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~ 507 (707)
+.+.|++ +++||+|+||.||+|+.+ +++.||+|++..... ...+.+|++++++++||||+++++++. ..
T Consensus 18 ~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 92 (405)
T 3rgf_A 18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-----SMSACREIALLRELKHPNVISLQKVFLSHAD 92 (405)
T ss_dssp HHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-----CHHHHHHHHHHHHCCCTTBCCCCEEEEETTT
T ss_pred hhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-----CHHHHHHHHHHHhcCCCCeeeEeeEEecCCC
Confidence 3455766 558999999999999754 578999999875422 235778999999999999999999994 46
Q ss_pred CceeEEEeeeccCcHHHHHhcccc------cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeee----cCC
Q 038671 508 RHSFIVYEYLEMGSLAMILSNDAA------AKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLL----DLE 577 (707)
Q Consensus 508 ~~~~lv~e~~~~~~L~~~l~~~~~------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~----~~~ 577 (707)
...++||||+.+ +|.+++..... ...+++..++.++.||+.||+|||+. ||+||||||+||++ +.+
T Consensus 93 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~ 168 (405)
T 3rgf_A 93 RKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPER 168 (405)
T ss_dssp TEEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTT
T ss_pred CeEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCC
Confidence 789999999975 77776643221 22489999999999999999999999 99999999999999 677
Q ss_pred CCeEEeccccceecCCCC---CCccccccccCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCccccccc----
Q 038671 578 NEAHVSDFGTAKFLKPDS---SNWAELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSISS---- 649 (707)
Q Consensus 578 ~~~kl~Dfg~~~~~~~~~---~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~---- 649 (707)
+.+||+|||+++...... .......||+.|+|||++.+. .++.++|||||||++|+|++|+.||........
T Consensus 169 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~ 248 (405)
T 3rgf_A 169 GRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNP 248 (405)
T ss_dssp TCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CC
T ss_pred CcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcccccccccc
Confidence 899999999998765332 223446789999999998874 489999999999999999999999964222100
Q ss_pred -ccchhhhhhhhhcCCCCCCC----------------------CcchH--------HHHHHHHHHHHhccCCCCCCCCCH
Q 038671 650 -SSSNLEIALNEMLDPRLPTP----------------------SHNVQ--------DKLISIMEVAISCLDESPESRPTI 698 (707)
Q Consensus 650 -~~~~~~~~~~~~~~~~~~~~----------------------~~~~~--------~~~~~l~~li~~cl~~~P~~Rps~ 698 (707)
...........+..+..... ..... .....+.+++.+||+.||.+|||+
T Consensus 249 ~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta 328 (405)
T 3rgf_A 249 YHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITS 328 (405)
T ss_dssp CCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCH
T ss_pred chHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCH
Confidence 00011111111100000000 00000 003457899999999999999999
Q ss_pred HHHHHH
Q 038671 699 QKVSQL 704 (707)
Q Consensus 699 ~~l~~~ 704 (707)
+|+++.
T Consensus 329 ~e~L~h 334 (405)
T 3rgf_A 329 EQAMQD 334 (405)
T ss_dssp HHHHTS
T ss_pred HHHhcC
Confidence 999863
No 246
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=7.2e-38 Score=333.94 Aligned_cols=256 Identities=25% Similarity=0.317 Sum_probs=191.2
Q ss_pred cCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecC------C
Q 038671 436 NDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHA------R 508 (707)
Q Consensus 436 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~ 508 (707)
.+|++.+.||+|+||.||+|+. .+|+.||||++..... ...+|+++++.++||||+++++++... .
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~-------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~ 126 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 126 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT-------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch-------hHHHHHHHHHHcCCCCccceeeEEeccCCCCcce
Confidence 4688999999999999999965 5699999999865321 123699999999999999999988432 2
Q ss_pred ceeEEEeeeccCcHHHHHhc-ccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCC-CCeEEeccc
Q 038671 509 HSFIVYEYLEMGSLAMILSN-DAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLE-NEAHVSDFG 586 (707)
Q Consensus 509 ~~~lv~e~~~~~~L~~~l~~-~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~-~~~kl~Dfg 586 (707)
..++||||+++ ++.+.+.. ......+++..++.++.||++||+|||++ ||+||||||+||+++.+ +.+||+|||
T Consensus 127 ~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG 202 (420)
T 1j1b_A 127 YLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFG 202 (420)
T ss_dssp EEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred eEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccch
Confidence 36799999986 55554432 22345689999999999999999999999 99999999999999965 568999999
Q ss_pred cceecCCCCCCccccccccCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhh-------hhh
Q 038671 587 TAKFLKPDSSNWAELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLE-------IAL 658 (707)
Q Consensus 587 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~-------~~~ 658 (707)
+++....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||.............. ..+
T Consensus 203 ~a~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~ 281 (420)
T 1j1b_A 203 SAKQLVRGEP-NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 281 (420)
T ss_dssp TCEECCTTCC-CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHH
T ss_pred hhhhcccCCC-ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 9987654332 3446789999999998764 689999999999999999999999975332110000000 000
Q ss_pred hhh----cCCCCCCCCc-ch-----HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 659 NEM----LDPRLPTPSH-NV-----QDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 659 ~~~----~~~~~~~~~~-~~-----~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
..+ ....++.... .. ...+.++.+++.+||..||++||++.|+++
T Consensus 282 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 282 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 000 1111111100 00 122456899999999999999999999975
No 247
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.6e-37 Score=329.20 Aligned_cols=333 Identities=23% Similarity=0.240 Sum_probs=288.3
Q ss_pred CCCCceeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeee
Q 038671 2 LSNLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLT 81 (707)
Q Consensus 2 l~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 81 (707)
++++++|++++|.++...+..|..+++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 57899999999999977666689999999999999999988888999999999999999999998899999999999999
Q ss_pred cccccccccCCC-CCCCCCccEEEeccCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccCC
Q 038671 82 LENNQLRGPIPN-LRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITG 160 (707)
Q Consensus 82 l~~n~i~~~~~~-l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~ 160 (707)
+++|.++.+++. +..+++|++|++++|+++.+.+..|..+++|++|++++|.++.+ .+..+++|+.|++++|.+++
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~ 200 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST 200 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSE
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccccc
Confidence 999999988876 68999999999999999999999999999999999999999876 46778999999999999873
Q ss_pred CCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccccC
Q 038671 161 SMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGN 240 (707)
Q Consensus 161 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~ 240 (707)
+...++|+.|++++|.+... +. ...++|++|++++|.+++. ..+..+++|++|+|++|.+++..|..|..
T Consensus 201 -----~~~~~~L~~L~l~~n~l~~~-~~--~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~ 270 (390)
T 3o6n_A 201 -----LAIPIAVEELDASHNSINVV-RG--PVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVK 270 (390)
T ss_dssp -----EECCSSCSEEECCSSCCCEE-EC--CCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTT
T ss_pred -----cCCCCcceEEECCCCeeeec-cc--cccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccc
Confidence 34457899999999999844 33 2347999999999999854 57889999999999999999888999999
Q ss_pred cccCceEeeecccccccCchhhhhcccCCeeeecCccCCCCCCcccccccccceEeccccccCCchhHhhccCCCceeEe
Q 038671 241 LVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYID 320 (707)
Q Consensus 241 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~ 320 (707)
+++|+.|+|++|++++. +..+..+++|+.|++++|.++ ..|..+..+++|+.|++++|++++.. +..+++|+.|+
T Consensus 271 l~~L~~L~L~~n~l~~~-~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~---~~~~~~L~~L~ 345 (390)
T 3o6n_A 271 MQRLERLYISNNRLVAL-NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLT 345 (390)
T ss_dssp CSSCCEEECCSSCCCEE-ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEE
T ss_pred cccCCEEECCCCcCccc-CcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccceeC---chhhccCCEEE
Confidence 99999999999999764 555678899999999999996 56677889999999999999998763 67889999999
Q ss_pred eccCcccccCCCccccccCchhhcccCcCcCCC
Q 038671 321 ISYNELHGSIPNSTAFRDAPMEALQGNKGLCGD 353 (707)
Q Consensus 321 l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~c~~ 353 (707)
+++|+|+|.+... .+..........++..|..
T Consensus 346 l~~N~~~~~~~~~-~~~~~~~~~~~~~~~~c~~ 377 (390)
T 3o6n_A 346 LSHNDWDCNSLRA-LFRNVARPAVDDADQHCKI 377 (390)
T ss_dssp CCSSCEEHHHHHH-HTTTCCTTTBCCCCSCCCT
T ss_pred cCCCCccchhHHH-HHHHHHhhcccccCceecc
Confidence 9999999975431 2233333344555555643
No 248
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=5.5e-38 Score=322.45 Aligned_cols=251 Identities=24% Similarity=0.367 Sum_probs=196.9
Q ss_pred HhcCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCC--CCceeeeeeeeecCCcee
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR--HRNIVKFYGFCSHARHSF 511 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~ 511 (707)
..++|++.+.||+|+||.||++...+++.||+|++...... ....+.+.+|++++.+++ ||||+++++++..++..+
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~ 104 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD-NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 104 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCC-HHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEE
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEecccccc-ccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEE
Confidence 35679999999999999999998888999999998654332 335677899999999997 599999999999999999
Q ss_pred EEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceec
Q 038671 512 IVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFL 591 (707)
Q Consensus 512 lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~ 591 (707)
+||| +.+++|.+++... ..+++..++.++.|+++||+|||+. +++||||||+||+++ ++.+||+|||++...
T Consensus 105 lv~e-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~ 176 (313)
T 3cek_A 105 MVME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQM 176 (313)
T ss_dssp EEEC-CCSEEHHHHHHHC---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCC-
T ss_pred EEEe-cCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEE-CCeEEEeeccccccc
Confidence 9999 6688999998643 3589999999999999999999999 999999999999996 589999999999876
Q ss_pred CCCCC--CccccccccCCCCcccccc-----------CCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhh
Q 038671 592 KPDSS--NWAELAGTYGYVAPELAYT-----------MKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIAL 658 (707)
Q Consensus 592 ~~~~~--~~~~~~g~~~y~aPE~~~~-----------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 658 (707)
..... ......|++.|+|||.+.+ ..++.++||||||+++|+|++|+.||..... . ....
T Consensus 177 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~------~-~~~~ 249 (313)
T 3cek_A 177 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN------Q-ISKL 249 (313)
T ss_dssp -------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS------H-HHHH
T ss_pred cCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH------H-HHHH
Confidence 54322 1234578999999999875 4688899999999999999999999963221 1 1112
Q ss_pred hhhcCCCCC--CCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 659 NEMLDPRLP--TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 659 ~~~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
....++... .+.. .+.++.+++.+||+.||++||++.|+++.
T Consensus 250 ~~~~~~~~~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 250 HAIIDPNHEIEFPDI----PEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp HHHHCTTSCCCCCCC----SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHhcccccCCccc----chHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 222222211 1111 13458899999999999999999999863
No 249
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=3.1e-38 Score=326.53 Aligned_cols=256 Identities=25% Similarity=0.369 Sum_probs=178.4
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHH-HHhcCCCCceeeeeeeeecCCceeE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVK-TLTGIRHRNIVKFYGFCSHARHSFI 512 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~l 512 (707)
.++|++.+.||+|+||.||+|.. .+|+.||+|++...... ....++..|+. +++.++||||+++++++..++..++
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~l 98 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDE--KEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWI 98 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCH--HHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCc--hHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEE
Confidence 36799999999999999999965 57999999999764322 23344555555 7778899999999999999999999
Q ss_pred EEeeeccCcHHHHHhcc--cccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEecccccee
Q 038671 513 VYEYLEMGSLAMILSND--AAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKF 590 (707)
Q Consensus 513 v~e~~~~~~L~~~l~~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~ 590 (707)
||||+.+ +|.+++... .....+++..+..++.|++.||.|||+.. |++||||||+||+++.++.+||+|||++..
T Consensus 99 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 175 (327)
T 3aln_A 99 CMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQ 175 (327)
T ss_dssp EECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC
T ss_pred EEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCcee
Confidence 9999985 777776431 12356899999999999999999999953 899999999999999999999999999987
Q ss_pred cCCCCCCccccccccCCCCcccc----ccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCC
Q 038671 591 LKPDSSNWAELAGTYGYVAPELA----YTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRL 666 (707)
Q Consensus 591 ~~~~~~~~~~~~g~~~y~aPE~~----~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (707)
...... .....|++.|+|||.+ .+..++.++||||||+++|+|++|+.||...... ............
T Consensus 176 ~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~~~~~~~~ 247 (327)
T 3aln_A 176 LVDSIA-KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV-------FDQLTQVVKGDP 247 (327)
T ss_dssp -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------------CCCCCSCC
T ss_pred cccccc-cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH-------HHHHHHHhcCCC
Confidence 653322 2334789999999998 4566899999999999999999999999642211 111111111111
Q ss_pred CC-CCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 667 PT-PSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 667 ~~-~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
+. +.......+.++.+++.+||+.||++||++.++++
T Consensus 248 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 248 PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 11 11111123456899999999999999999999976
No 250
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=5.9e-38 Score=336.10 Aligned_cols=251 Identities=24% Similarity=0.341 Sum_probs=188.0
Q ss_pred cCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcC-CCCceeeeeeeeecCCceeEEE
Q 038671 436 NDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGFCSHARHSFIVY 514 (707)
Q Consensus 436 ~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 514 (707)
+.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|++++.++ +||||+++++++.+++..++||
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~------~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~ 88 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID------FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIAL 88 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG------GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH------HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEE
Confidence 445567889999999998776678999999997532 234577899999876 8999999999999999999999
Q ss_pred eeeccCcHHHHHhcccccCC----CChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCC-------------
Q 038671 515 EYLEMGSLAMILSNDAAAKD----LGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLE------------- 577 (707)
Q Consensus 515 e~~~~~~L~~~l~~~~~~~~----l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~------------- 577 (707)
||+. |+|.+++........ .++..++.++.||+.||+|||+. ||+||||||+||+++.+
T Consensus 89 E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~ 164 (434)
T 2rio_A 89 ELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAEN 164 (434)
T ss_dssp CCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCS
T ss_pred ecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCc
Confidence 9996 699999975433211 23445678999999999999999 99999999999999754
Q ss_pred CCeEEeccccceecCCCCCC----ccccccccCCCCcccccc-------CCCCccchhHHHHHHHHHHHh-CCCCCCccc
Q 038671 578 NEAHVSDFGTAKFLKPDSSN----WAELAGTYGYVAPELAYT-------MKVTEKCDVYSFGVLALEVIK-GKHPRDFIS 645 (707)
Q Consensus 578 ~~~kl~Dfg~~~~~~~~~~~----~~~~~g~~~y~aPE~~~~-------~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~ 645 (707)
+.+||+|||++......... .....||+.|+|||++.+ ..++.++|||||||++|||++ |+.||....
T Consensus 165 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~ 244 (434)
T 2rio_A 165 LRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 244 (434)
T ss_dssp CEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTT
T ss_pred eEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCch
Confidence 48999999999887644322 234579999999999875 568999999999999999999 999986321
Q ss_pred ccccccchhhhhhhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 646 SISSSSSNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
. ............... ........+.++.+++.+||+.||.+|||+.++++
T Consensus 245 ~------~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 245 S------RESNIIRGIFSLDEM-KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp T------HHHHHHHTCCCCCCC-TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred h------hHHHHhcCCCCcccc-cccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 1 111111111111111 11123456678999999999999999999999986
No 251
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.4e-37 Score=345.95 Aligned_cols=321 Identities=24% Similarity=0.247 Sum_probs=207.9
Q ss_pred CCCceeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeec
Q 038671 3 SNLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTL 82 (707)
Q Consensus 3 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l 82 (707)
++|++|+|++|.|++..+..|+.+++|++|+|++|++++..|++|.++++|++|+|++|.|+. +|.. .+++|++|++
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQN-ISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCE-ECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCc-cCcc--ccccCCEEEC
Confidence 356666666666665555666666666666666666666666666666666666666666663 3333 5666666666
Q ss_pred ccccccccC--CCCCCCCCccEEEeccCccccccCccccCCCCC--cEEEcccccc--cccCCCCCCCCC----------
Q 038671 83 ENNQLRGPI--PNLRNLTSLVRVRLNQNHLTGNISESFGIHPNL--AFIDLSHNYF--YGEISSDWGRCP---------- 146 (707)
Q Consensus 83 ~~n~i~~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L--~~L~L~~n~i--~~~~~~~~~~~~---------- 146 (707)
++|.++.++ ..+.++++|++|++++|+++.. .+..+++| ++|++++|.+ +...+..+..+.
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~ 205 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHP 205 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECS
T ss_pred CCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecC
Confidence 666666543 3466666666666666666542 23333333 6666666555 333333222211
Q ss_pred -----------------------------------------------------------------------CCcEEEcCC
Q 038671 147 -----------------------------------------------------------------------KLGTLDFSS 155 (707)
Q Consensus 147 -----------------------------------------------------------------------~L~~L~L~~ 155 (707)
+|++|++++
T Consensus 206 n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~ 285 (562)
T 3a79_B 206 NSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYN 285 (562)
T ss_dssp SSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEE
T ss_pred ccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEec
Confidence 455555555
Q ss_pred CccCCCCchhh-----------------------------------------------------hCCCCCCEEeCCCCCC
Q 038671 156 NNITGSMPAEI-----------------------------------------------------IHSSQLKVLDLSSNHI 182 (707)
Q Consensus 156 n~i~~~~~~~~-----------------------------------------------------~~~~~L~~L~l~~n~l 182 (707)
|.+++..+..+ ..+++|++|++++|.+
T Consensus 286 n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l 365 (562)
T 3a79_B 286 LTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVF 365 (562)
T ss_dssp EEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCC
T ss_pred cEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCCcc
Confidence 55543333322 4567778888888887
Q ss_pred CCCCChhhhCCCCCcEEEecCCccccCC--ccccCCCCcccEEEccCCccCC-CCCccccCcccCceEeeecccccccCc
Q 038671 183 VGEMPSKLGKLSSLIKLILNSNQLCGQL--SLELGSLTQLERLDLSSNRLSN-SIPKSLGNLVKLHYLNLSNNQFIKKIP 259 (707)
Q Consensus 183 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~--~~~~~~l~~L~~L~l~~n~i~~-~~~~~l~~l~~L~~L~l~~n~l~~~~~ 259 (707)
++..|..+..+++|++|++++|++++.. +..+..+++|++|++++|.+++ ..+..+..+++|+.|++++|++++..+
T Consensus 366 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 445 (562)
T 3a79_B 366 TDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVF 445 (562)
T ss_dssp CTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGG
T ss_pred ccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchh
Confidence 7767777777888888888888877532 3557777888888888888876 444457777788888888887765544
Q ss_pred hhhhhcccCCeeeecCccCCCCCCcccccccccceEeccccccCCchhHhhccCCCceeEeeccCcccccCCC
Q 038671 260 VELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDISYNELHGSIPN 332 (707)
Q Consensus 260 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~l~~n~~~~~~~~ 332 (707)
..+. ++|+.|++++|.++ .+|..+..+++|+.|++++|++++..+..+..+++|+.|++++|+|.|.|+.
T Consensus 446 ~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 515 (562)
T 3a79_B 446 RCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG 515 (562)
T ss_dssp SSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHHH
T ss_pred hhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcch
Confidence 4333 57888888888885 4555555778888888888888754444477788888888888888887764
No 252
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=2e-38 Score=347.75 Aligned_cols=262 Identities=26% Similarity=0.315 Sum_probs=202.3
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeec------C
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSH------A 507 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~ 507 (707)
.++|++.+.||+|+||.||+|.. .+|+.||+|++.... .....+.+.+|++++++++||||+++++++.. .
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~--~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~ 90 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL--SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPN 90 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC--CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTT
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC--CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCC
Confidence 37899999999999999999965 568999999987643 23356779999999999999999999998755 6
Q ss_pred CceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCC---eEEec
Q 038671 508 RHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENE---AHVSD 584 (707)
Q Consensus 508 ~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~---~kl~D 584 (707)
+..++||||+++++|.+++........+++..++.++.|++.||+|||+. ||+||||||+||+++.++. +||+|
T Consensus 91 ~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~D 167 (676)
T 3qa8_A 91 DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIID 167 (676)
T ss_dssp SSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECS
T ss_pred CeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcc
Confidence 77899999999999999998765555799999999999999999999999 9999999999999997765 99999
Q ss_pred cccceecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccc------cchhhhhh
Q 038671 585 FGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSS------SSNLEIAL 658 (707)
Q Consensus 585 fg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~------~~~~~~~~ 658 (707)
||.+....... ......|++.|+|||.+.+..++.++||||+|+++|+|++|+.||......... ........
T Consensus 168 FG~a~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~ 246 (676)
T 3qa8_A 168 LGYAKELDQGE-LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVV 246 (676)
T ss_dssp CCCCCBTTSCC-CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCS
T ss_pred ccccccccccc-ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhh
Confidence 99998765433 334568999999999999999999999999999999999999998532110000 00000000
Q ss_pred h------hhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 038671 659 N------EMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVS 702 (707)
Q Consensus 659 ~------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~ 702 (707)
. .......+.+.......+..+.+++.+||+.||++|||+.+++
T Consensus 247 ~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL 296 (676)
T 3qa8_A 247 YDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP 296 (676)
T ss_dssp CCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred hhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence 0 0011122233333445677899999999999999999997754
No 253
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=5.7e-38 Score=327.97 Aligned_cols=256 Identities=20% Similarity=0.302 Sum_probs=195.4
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCc----
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARH---- 509 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~---- 509 (707)
.++|.+.+.||+|+||.||+|.. .+|+.||||++...... ......+.+|+.+++.++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 101 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQS-EIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 101 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSS-HHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccc-hHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence 46799999999999999999954 57999999998765433 2345678899999999999999999999977654
Q ss_pred --eeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEecccc
Q 038671 510 --SFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGT 587 (707)
Q Consensus 510 --~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~ 587 (707)
.++||||+. ++|.+++. ..+++..++.++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 102 YDFYLVMPFMQ-TDLQKIMG-----LKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp CCCEEEEECCS-EEGGGTTT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred eeEEEEecccc-CCHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeeccc
Confidence 499999997 58877663 2489999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCCccccccccCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCcccccccccch-------------
Q 038671 588 AKFLKPDSSNWAELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSN------------- 653 (707)
Q Consensus 588 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~------------- 653 (707)
+...... .....+|+.|+|||.+.+ ..++.++||||||+++|+|++|+.||............
T Consensus 173 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 249 (353)
T 3coi_A 173 ARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQ 249 (353)
T ss_dssp TTC-----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHT
T ss_pred ccCCCCC---ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 9764422 334578999999998876 67899999999999999999999999743321100000
Q ss_pred ------hhhhhhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 654 ------LEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 654 ------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
.......................+.++.+++.+||+.||++|||++++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 250 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp TCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00000000000000001111233456899999999999999999999986
No 254
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.2e-37 Score=355.30 Aligned_cols=343 Identities=21% Similarity=0.276 Sum_probs=288.9
Q ss_pred CCCCCceeeccCCeeee-----------------cCCcccc--CCCCCCeEECCCCccccccCcCccCCCCCcEEEcccC
Q 038671 1 NLSNLAFLYLYNNSFSG-----------------SIPSEIG--RLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDN 61 (707)
Q Consensus 1 nl~~l~~L~l~~n~i~~-----------------~~~~~~~--~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n 61 (707)
+|++|++|+|++|.+++ .+|..++ ++++|++|+|++|++.+.+|..|.++++|++|+|++|
T Consensus 446 ~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N 525 (876)
T 4ecn_A 446 RLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACN 525 (876)
T ss_dssp GCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTC
T ss_pred cCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCC
Confidence 47899999999999998 3899988 9999999999999999899999999999999999999
Q ss_pred c-Ccc-cCCccccCCC-------CCCeeecccccccccCC--CCCCCCCccEEEeccCccccccCccccCCCCCcEEEcc
Q 038671 62 A-LSG-AIPKEYGNLV-------KLTLLTLENNQLRGPIP--NLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLS 130 (707)
Q Consensus 62 ~-i~~-~~~~~~~~l~-------~L~~L~l~~n~i~~~~~--~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~ 130 (707)
+ +++ .+|..+++++ +|++|+|++|.+..++. .+..+++|+.|+|++|+++.++ .|..+++|+.|+|+
T Consensus 526 ~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~~~~l~~L~~L~~L~Ls~N~l~~lp--~~~~L~~L~~L~Ls 603 (876)
T 4ecn_A 526 RGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLDCVHNKVRHLE--AFGTNVKLTDLKLD 603 (876)
T ss_dssp TTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCCHHHHTTCTTCCEEECTTSCCCBCC--CCCTTSEESEEECC
T ss_pred CCcccccchHHHHhhhhcccccCCccEEEeeCCcCCccCChhhhhcCCCCCEEECCCCCcccch--hhcCCCcceEEECc
Confidence 8 887 6787666655 99999999999998777 7999999999999999999555 89999999999999
Q ss_pred cccccccCCCCCCCCCC-CcEEEcCCCccCCCCchhhhCCC--CCCEEeCCCCCCCCCCChh---hh--CCCCCcEEEec
Q 038671 131 HNYFYGEISSDWGRCPK-LGTLDFSSNNITGSMPAEIIHSS--QLKVLDLSSNHIVGEMPSK---LG--KLSSLIKLILN 202 (707)
Q Consensus 131 ~n~i~~~~~~~~~~~~~-L~~L~L~~n~i~~~~~~~~~~~~--~L~~L~l~~n~l~~~~~~~---~~--~l~~L~~L~l~ 202 (707)
+|.++ ..+..+..+++ |+.|+|++|.++ ..+..+..++ +|+.|+|++|.+.+.+|.. +. .+++|+.|+++
T Consensus 604 ~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls 681 (876)
T 4ecn_A 604 YNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLS 681 (876)
T ss_dssp SSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECC
T ss_pred CCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEcc
Confidence 99999 66677999999 999999999999 6677776654 4999999999998665532 22 34589999999
Q ss_pred CCccccCCccccCCCCcccEEEccCCccCCCCCccccC-------cccCceEeeecccccccCchhhh--hcccCCeeee
Q 038671 203 SNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGN-------LVKLHYLNLSNNQFIKKIPVELE--KLIHLSELDL 273 (707)
Q Consensus 203 ~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~-------l~~L~~L~l~~n~l~~~~~~~~~--~l~~L~~L~l 273 (707)
+|.++......+..+++|+.|+|++|.++.+.+..+.. +++|+.|+|++|+++ ..|..+. .+++|+.|+|
T Consensus 682 ~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~L 760 (876)
T 4ecn_A 682 YNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDV 760 (876)
T ss_dssp SSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEEC
T ss_pred CCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEe
Confidence 99999554444568999999999999999544444432 349999999999997 5566676 8999999999
Q ss_pred cCccCCCCCCcccccccccceEeccc------cccCCchhHhhccCCCceeEeeccCcccccCCCccccccCchhhcccC
Q 038671 274 SHNFLGEEMPSQICNMQSLEKLNLSH------NNLSGFIPSCFEELHGLSYIDISYNELHGSIPNSTAFRDAPMEALQGN 347 (707)
Q Consensus 274 ~~n~l~~~~~~~~~~~~~L~~L~l~~------n~i~~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~~ 347 (707)
++|.+++ +|..+..+++|+.|++++ |.+.+..|..+..+++|+.|++++|++ +.+|... .+......+.+|
T Consensus 761 s~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l-~~~L~~LdLs~N 837 (876)
T 4ecn_A 761 SYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKL-TPQLYILDIADN 837 (876)
T ss_dssp CSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCC-CSSSCEEECCSC
T ss_pred CCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhh-cCCCCEEECCCC
Confidence 9999977 688899999999999976 778888999999999999999999999 5555432 245555666677
Q ss_pred cCcC
Q 038671 348 KGLC 351 (707)
Q Consensus 348 ~~~c 351 (707)
+...
T Consensus 838 ~l~~ 841 (876)
T 4ecn_A 838 PNIS 841 (876)
T ss_dssp TTCE
T ss_pred CCCc
Confidence 6543
No 255
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=344.00 Aligned_cols=321 Identities=24% Similarity=0.232 Sum_probs=193.2
Q ss_pred CCCceeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeec
Q 038671 3 SNLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTL 82 (707)
Q Consensus 3 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l 82 (707)
++|++|+|++|.+++..|..|..+++|++|+|++|++++..|++|.++++|++|+|++|+|+. +|.. .+++|++|++
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVK-ISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCE-EECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceee-cCcc--ccCCccEEec
Confidence 356666666666665555666666666666666666665556666666666666666666663 3333 5666666666
Q ss_pred cccccccc--CCCCCCCCCccEEEeccCccccccCccccCCCCC--cEEEcccccc--cccCCCCCCCCC----------
Q 038671 83 ENNQLRGP--IPNLRNLTSLVRVRLNQNHLTGNISESFGIHPNL--AFIDLSHNYF--YGEISSDWGRCP---------- 146 (707)
Q Consensus 83 ~~n~i~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L--~~L~L~~n~i--~~~~~~~~~~~~---------- 146 (707)
++|.++.+ +..+..+++|++|++++|+++. ..+..+++| ++|++++|.+ ....+..+..+.
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~ 174 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPT 174 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCS
T ss_pred cCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEecc
Confidence 66666542 2346666666666666666553 223333333 4444444444 222222222211
Q ss_pred -------------------------------------------------------------------------CCcEEEc
Q 038671 147 -------------------------------------------------------------------------KLGTLDF 153 (707)
Q Consensus 147 -------------------------------------------------------------------------~L~~L~L 153 (707)
+|++|++
T Consensus 175 n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l 254 (520)
T 2z7x_B 175 NKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSI 254 (520)
T ss_dssp SSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEE
T ss_pred CcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEe
Confidence 3333333
Q ss_pred CCCccCCCCchhh-----------------------------------------------------hCCCCCCEEeCCCC
Q 038671 154 SSNNITGSMPAEI-----------------------------------------------------IHSSQLKVLDLSSN 180 (707)
Q Consensus 154 ~~n~i~~~~~~~~-----------------------------------------------------~~~~~L~~L~l~~n 180 (707)
++|.+++..+..+ ..+++|++|++++|
T Consensus 255 ~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n 334 (520)
T 2z7x_B 255 SNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNN 334 (520)
T ss_dssp EEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSS
T ss_pred ecccccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeECC
Confidence 3333332222222 45667777777777
Q ss_pred CCCCCCChhhhCCCCCcEEEecCCcccc--CCccccCCCCcccEEEccCCccCCCCC-ccccCcccCceEeeeccccccc
Q 038671 181 HIVGEMPSKLGKLSSLIKLILNSNQLCG--QLSLELGSLTQLERLDLSSNRLSNSIP-KSLGNLVKLHYLNLSNNQFIKK 257 (707)
Q Consensus 181 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~l~~n~i~~~~~-~~l~~l~~L~~L~l~~n~l~~~ 257 (707)
++++..|..+..+++|++|++++|++++ ..+..+..+++|++|++++|.+++..| ..+..+++|+.|++++|++++.
T Consensus 335 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~ 414 (520)
T 2z7x_B 335 LLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDT 414 (520)
T ss_dssp CCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGG
T ss_pred ccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcc
Confidence 7776666667777777777777777764 334556677777777777777766233 3466667777777777777655
Q ss_pred CchhhhhcccCCeeeecCccCCCCCCcccccccccceEeccccccCCchhHhhccCCCceeEeeccCcccccCCC
Q 038671 258 IPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDISYNELHGSIPN 332 (707)
Q Consensus 258 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~l~~n~~~~~~~~ 332 (707)
.+..+. ++|+.|++++|.++ .+|..+..+++|+.|++++|++++..+..+..+++|+.|++++|+|+|.|+.
T Consensus 415 ~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 486 (520)
T 2z7x_B 415 IFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 486 (520)
T ss_dssp GGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred hhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCCc
Confidence 544443 56777777777775 5566566777777777777777754444466777777777777777776653
No 256
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=8.6e-38 Score=350.15 Aligned_cols=253 Identities=23% Similarity=0.392 Sum_probs=200.4
Q ss_pred hcCCCCCceeeecCCeeEEEEEcC----CCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCce
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAELP----SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHS 510 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 510 (707)
.++|++.+.||+|+||.||+|... .+..||+|+..... .....+.+.+|+.++++++||||+++++++. ++..
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~ 465 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT--SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 465 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSC
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCce
Confidence 467888999999999999999653 35679999986542 2334577999999999999999999999985 4678
Q ss_pred eEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEecccccee
Q 038671 511 FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKF 590 (707)
Q Consensus 511 ~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~ 590 (707)
++||||+++|+|.+++... ...+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++.
T Consensus 466 ~lv~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~ 540 (656)
T 2j0j_A 466 WIIMELCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRY 540 (656)
T ss_dssp EEEEECCTTCBHHHHHHHT--TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCS
T ss_pred EEEEEcCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCee
Confidence 9999999999999999643 23589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC-CccccccccCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchhhhhhhhhcCCCCCC
Q 038671 591 LKPDSS-NWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNLEIALNEMLDPRLPT 668 (707)
Q Consensus 591 ~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (707)
...... ......+++.|+|||.+.+..++.++||||||+++|||++ |..||..... .......... ...+.
T Consensus 541 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~-----~~~~~~i~~~--~~~~~ 613 (656)
T 2j0j_A 541 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN-----NDVIGRIENG--ERLPM 613 (656)
T ss_dssp CCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HHHHHHHHHT--CCCCC
T ss_pred cCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH-----HHHHHHHHcC--CCCCC
Confidence 654322 1223456789999999998899999999999999999997 9999864321 1111111111 12222
Q ss_pred CCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 669 PSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 669 ~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
+. ..+..+.+++.+||+.||++||++.++++.|+
T Consensus 614 ~~----~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~ 647 (656)
T 2j0j_A 614 PP----NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 647 (656)
T ss_dssp CT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred Cc----cccHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 22 23356889999999999999999999999874
No 257
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.5e-37 Score=323.31 Aligned_cols=252 Identities=20% Similarity=0.302 Sum_probs=199.8
Q ss_pred hcCCCCCceeeecCCeeEEEEEc--CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCC------ceeeeeeeeec
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL--PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHR------NIVKFYGFCSH 506 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~------niv~~~~~~~~ 506 (707)
.++|++.+.||+|+||.||+|.. .+++.||+|++... ....+.+.+|+++++.++|+ +++++++++..
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~ 88 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV----DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH 88 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC----CchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc
Confidence 46899999999999999999964 46899999998642 23456788899988888655 59999999999
Q ss_pred CCceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecC----------
Q 038671 507 ARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDL---------- 576 (707)
Q Consensus 507 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~---------- 576 (707)
.+..++||||+ +++|.+++.... ..++++..++.++.||+.||+|||++ ||+||||||+||+++.
T Consensus 89 ~~~~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~ 163 (339)
T 1z57_A 89 HGHICIVFELL-GLSTYDFIKENG-FLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPK 163 (339)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC--
T ss_pred CCcEEEEEcCC-CCCHHHHHHhcC-CCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCc
Confidence 99999999999 889999886543 24588999999999999999999999 9999999999999987
Q ss_pred ---------CCCeEEeccccceecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccc
Q 038671 577 ---------ENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSI 647 (707)
Q Consensus 577 ---------~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~ 647 (707)
++.+||+|||.+...... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||......
T Consensus 164 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 240 (339)
T 1z57_A 164 IKRDERTLINPDIKVVDFGSATYDDEH---HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSK 240 (339)
T ss_dssp --CEEEEESCCCEEECCCSSCEETTSC---CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHH
T ss_pred cccccccccCCCceEeeCcccccCccc---cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChH
Confidence 668999999999875432 23457899999999999989999999999999999999999999643221
Q ss_pred ccccchhhhhhhhhcCC-------------------------------------CCCCCCcchHHHHHHHHHHHHhccCC
Q 038671 648 SSSSSNLEIALNEMLDP-------------------------------------RLPTPSHNVQDKLISIMEVAISCLDE 690 (707)
Q Consensus 648 ~~~~~~~~~~~~~~~~~-------------------------------------~~~~~~~~~~~~~~~l~~li~~cl~~ 690 (707)
. ..........+ ............+.++.+++.+||+.
T Consensus 241 ~-----~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~ 315 (339)
T 1z57_A 241 E-----HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEY 315 (339)
T ss_dssp H-----HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCS
T ss_pred H-----HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCc
Confidence 0 00000000000 00000011123466799999999999
Q ss_pred CCCCCCCHHHHHH
Q 038671 691 SPESRPTIQKVSQ 703 (707)
Q Consensus 691 ~P~~Rps~~~l~~ 703 (707)
||.+|||+.|+++
T Consensus 316 dP~~Rpt~~ell~ 328 (339)
T 1z57_A 316 DPAKRITLREALK 328 (339)
T ss_dssp STTTSCCHHHHTT
T ss_pred CcccccCHHHHhc
Confidence 9999999999985
No 258
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=6e-38 Score=323.55 Aligned_cols=257 Identities=24% Similarity=0.341 Sum_probs=190.5
Q ss_pred hcCCCCCceeeecCCeeEEEEEcC-CCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeee--------
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCS-------- 505 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~-------- 505 (707)
.++|++.+.||+|+||.||+|... +++.||+|++... .....+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 86 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT---DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTD 86 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC---SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC---ChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccc
Confidence 468999999999999999999654 5899999998653 2335577899999999999999999999873
Q ss_pred ------cCCceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeec-CCC
Q 038671 506 ------HARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLD-LEN 578 (707)
Q Consensus 506 ------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~-~~~ 578 (707)
+.+..++||||++ ++|.+++.. .++++..++.++.|++.||+|||++ ||+||||||+||+++ .++
T Consensus 87 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 158 (320)
T 2i6l_A 87 DVGSLTELNSVYIVQEYME-TDLANVLEQ----GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDL 158 (320)
T ss_dssp ----CCSCSEEEEEEECCS-EEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTT
T ss_pred ccccccccCceeEEeeccC-CCHHHHhhc----CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCC
Confidence 3467899999998 599999853 3589999999999999999999999 999999999999997 567
Q ss_pred CeEEeccccceecCCCC---CCccccccccCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchh
Q 038671 579 EAHVSDFGTAKFLKPDS---SNWAELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNL 654 (707)
Q Consensus 579 ~~kl~Dfg~~~~~~~~~---~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~ 654 (707)
.+||+|||++....... .......+++.|+|||.+.+ ..++.++||||||+++|||++|+.||.............
T Consensus 159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~ 238 (320)
T 2i6l_A 159 VLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLIL 238 (320)
T ss_dssp EEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred eEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 99999999998764321 12234567899999998765 678999999999999999999999997433211000000
Q ss_pred h-------hhhh------------hhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 655 E-------IALN------------EMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 655 ~-------~~~~------------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
. .... ....+..+. .......+.++.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 239 ESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPL-TQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCH-HHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HhcCCCchhhhhhhhhcCcccccccccCCCCCh-hHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 0 0000 000000000 0001123456899999999999999999999986
No 259
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=2.7e-38 Score=326.94 Aligned_cols=259 Identities=21% Similarity=0.328 Sum_probs=197.4
Q ss_pred HhcCCCCCceeeecCCeeEEEEEc--CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcC---CCCceeeeeeeee---
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAEL--PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI---RHRNIVKFYGFCS--- 505 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~--- 505 (707)
+.++|++.+.||+|+||.||+|+. .+|+.||+|++....... .....+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT-SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccc-cCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 457899999999999999999975 468899999986432111 1112355666666655 8999999999987
Q ss_pred --cCCceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEe
Q 038671 506 --HARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVS 583 (707)
Q Consensus 506 --~~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~ 583 (707)
.....++||||+. ++|.+++.... ...+++..++.++.|++.||+|||+. |++||||||+||+++.++.+||+
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSC-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEe
Confidence 5667899999998 69999986433 23489999999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhc-
Q 038671 584 DFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEML- 662 (707)
Q Consensus 584 Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~- 662 (707)
|||.+...... .......|++.|+|||.+.+..++.++||||||+++|+|++|+.||....... ..........
T Consensus 163 Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~i~~~~~~ 237 (326)
T 1blx_A 163 DFGLARIYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD----QLGKILDVIGL 237 (326)
T ss_dssp SCCSCCCCCGG-GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHHHHCC
T ss_pred cCcccccccCC-CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH----HHHHHHHHcCC
Confidence 99999765432 22344578999999999998889999999999999999999999997432211 0111110000
Q ss_pred ------------------CCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 663 ------------------DPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 663 ------------------~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
..............+..+.+++.+||+.||++||++.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp CCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00000000111223456889999999999999999999985
No 260
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.1e-38 Score=322.64 Aligned_cols=249 Identities=22% Similarity=0.336 Sum_probs=191.5
Q ss_pred HHHHHhcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchh---hhHHHHHHHHHHHhcC----CCCceeeee
Q 038671 430 EIIRVTNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEM---ASQQEFLNEVKTLTGI----RHRNIVKFY 501 (707)
Q Consensus 430 ~~~~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~---~~~~~~~~e~~~l~~l----~h~niv~~~ 501 (707)
+...+.++|++.+.||+|+||.||+|+. .+++.||+|++........ .....+.+|+.++.++ +||||++++
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 4456678999999999999999999965 5789999999865432211 1223456788888888 899999999
Q ss_pred eeeecCCceeEEEee-eccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeec-CCCC
Q 038671 502 GFCSHARHSFIVYEY-LEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLD-LENE 579 (707)
Q Consensus 502 ~~~~~~~~~~lv~e~-~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~-~~~~ 579 (707)
+++...+..++|+|+ +.+++|.+++... ..+++..++.++.||+.||+|||+. ||+||||||+||+++ .++.
T Consensus 105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 178 (312)
T 2iwi_A 105 DWFETQEGFMLVLERPLPAQDLFDYITEK---GPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGC 178 (312)
T ss_dssp EEC-----CEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTE
T ss_pred EEEecCCeEEEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCe
Confidence 999999999999999 7899999999653 3589999999999999999999999 999999999999999 7899
Q ss_pred eEEeccccceecCCCCCCccccccccCCCCccccccCCCC-ccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhh
Q 038671 580 AHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVT-EKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIAL 658 (707)
Q Consensus 580 ~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 658 (707)
+||+|||++...... ......|++.|+|||.+.+..+. .++||||||+++|+|++|+.||..... ..
T Consensus 179 ~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----------~~ 246 (312)
T 2iwi_A 179 AKLIDFGSGALLHDE--PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE----------IL 246 (312)
T ss_dssp EEECCCSSCEECCSS--CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH----------HH
T ss_pred EEEEEcchhhhcccC--cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH----------Hh
Confidence 999999999876543 23456789999999998876664 589999999999999999999863211 11
Q ss_pred hhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 659 NEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
. .....+. ..+.++.+++.+||+.||++||+++|+++.
T Consensus 247 ~----~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 247 E----AELHFPA----HVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp H----TCCCCCT----TSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred h----hccCCcc----cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1 1111111 123458899999999999999999999873
No 261
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=3.2e-37 Score=342.90 Aligned_cols=157 Identities=18% Similarity=0.149 Sum_probs=138.0
Q ss_pred CCCceeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeec
Q 038671 3 SNLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTL 82 (707)
Q Consensus 3 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l 82 (707)
++|++|+|++|++++..|..|+.+++|++|+|++|++++..|++|.++++|++|+|++|.+++..+..|+++++|++|++
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 105 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNL 105 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEEC
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEEC
Confidence 57999999999999998999999999999999999999888899999999999999999999888888999999999999
Q ss_pred cccccccc--CCCCCCCCCccEEEeccCc-cccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccC
Q 038671 83 ENNQLRGP--IPNLRNLTSLVRVRLNQNH-LTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNIT 159 (707)
Q Consensus 83 ~~n~i~~~--~~~l~~l~~L~~L~l~~n~-l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~ 159 (707)
++|.++.+ +..+.++++|++|++++|+ ++.+++..|..+++|++|++++|.+++..+..+..+++|++|++++|.+.
T Consensus 106 s~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~ 185 (549)
T 2z81_A 106 MGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA 185 (549)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST
T ss_pred CCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCccc
Confidence 99999853 4579999999999999998 67777788999999999999999999888877776555555544444433
No 262
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.7e-37 Score=342.42 Aligned_cols=310 Identities=20% Similarity=0.238 Sum_probs=213.5
Q ss_pred ceeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeecccc
Q 038671 6 AFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLENN 85 (707)
Q Consensus 6 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n 85 (707)
++|++++|+++ .+|..+. ++|++|+|++|++++..|.+|.++++|++|+|++|+|++..|..|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 58999999999 6787776 89999999999999777789999999999999999999888999999999999999999
Q ss_pred cccccCCCCCCCCCccEEEeccCccccc-cCccccCCCCCcEEEcccccccccCCCCCCCCCCC--cEEEcCCCcc--CC
Q 038671 86 QLRGPIPNLRNLTSLVRVRLNQNHLTGN-ISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKL--GTLDFSSNNI--TG 160 (707)
Q Consensus 86 ~i~~~~~~l~~l~~L~~L~l~~n~l~~~-~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L--~~L~L~~n~i--~~ 160 (707)
+++.++.. .+++|++|++++|+++++ .+..|+.+++|++|++++|.++. ..+..+++| +.|++++|.+ .+
T Consensus 80 ~l~~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~ 154 (520)
T 2z7x_B 80 KLVKISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEK 154 (520)
T ss_dssp CCCEEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSS
T ss_pred ceeecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccc
Confidence 99987766 899999999999999985 46889999999999999999986 457778888 9999999998 55
Q ss_pred CCchhhhCCC----------------------------------------------------------------------
Q 038671 161 SMPAEIIHSS---------------------------------------------------------------------- 170 (707)
Q Consensus 161 ~~~~~~~~~~---------------------------------------------------------------------- 170 (707)
..+..+..+.
T Consensus 155 ~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~ 234 (520)
T 2z7x_B 155 EDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTW 234 (520)
T ss_dssp CCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEH
T ss_pred cccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCH
Confidence 5555444422
Q ss_pred -------------CCCEEeCCCCCCCCCCChhh-----hCCCCCcEEEecCCcc--------------------------
Q 038671 171 -------------QLKVLDLSSNHIVGEMPSKL-----GKLSSLIKLILNSNQL-------------------------- 206 (707)
Q Consensus 171 -------------~L~~L~l~~n~l~~~~~~~~-----~~l~~L~~L~l~~n~l-------------------------- 206 (707)
+|+.|++++|.+++.+|..+ ..+++|+.+++++|.+
T Consensus 235 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l 314 (520)
T 2z7x_B 235 NSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRM 314 (520)
T ss_dssp HHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCC
T ss_pred HHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCcc
Confidence 67777777777776666555 3333333333333322
Q ss_pred ccCCccccCCCCcccEEEccCCccCCCCCccccCcccCceEeeecccccc--cCchhhhhcccCCeeeecCccCCCCCCc
Q 038671 207 CGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIK--KIPVELEKLIHLSELDLSHNFLGEEMPS 284 (707)
Q Consensus 207 ~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 284 (707)
.... .+..+++|++|++++|.+++..|..+..+++|++|++++|++++ ..+..+..+++|+.|++++|.+++..|.
T Consensus 315 ~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~ 392 (520)
T 2z7x_B 315 VHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKK 392 (520)
T ss_dssp CCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGG
T ss_pred cccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCccccc
Confidence 1000 01345555566666665555555555555556666665555554 2234455555555555555555442222
Q ss_pred -ccccccccceEeccccccCCchhHhhccCCCceeEeeccCccc
Q 038671 285 -QICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDISYNELH 327 (707)
Q Consensus 285 -~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~l~~n~~~ 327 (707)
.+..+++|+.|++++|++++..+..+. ++|+.|++++|+++
T Consensus 393 ~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~ 434 (520)
T 2z7x_B 393 GDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK 434 (520)
T ss_dssp CSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC
T ss_pred chhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc
Confidence 244444455555555544433333221 34444444444444
No 263
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.5e-37 Score=349.27 Aligned_cols=322 Identities=21% Similarity=0.239 Sum_probs=284.9
Q ss_pred CCCCCceeeccCCeeeecCCccccCCCCCCeEECCCCc-ccc-ccCcCccCC------CCCcEEEcccCcCcccCCc--c
Q 038671 1 NLSNLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNK-LCG-SIPHSLGNL------TQITFLTLFDNALSGAIPK--E 70 (707)
Q Consensus 1 nl~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~-i~~-~~~~~~~~l------~~L~~L~L~~n~i~~~~~~--~ 70 (707)
+|++|++|+|++|.+.+.+|..|+++++|++|+|++|+ +++ .+|..+.++ ++|++|+|++|.++ .+|. .
T Consensus 247 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~ 325 (636)
T 4eco_A 247 NLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETS 325 (636)
T ss_dssp GCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHH
T ss_pred ccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhh
Confidence 47899999999999999999999999999999999998 998 788888876 99999999999999 7788 9
Q ss_pred ccCCCCCCeeeccccccc-ccCCCCCCCCCccEEEeccCccccccCccccCCCC-CcEEEcccccccccCCCCCCCCC--
Q 038671 71 YGNLVKLTLLTLENNQLR-GPIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPN-LAFIDLSHNYFYGEISSDWGRCP-- 146 (707)
Q Consensus 71 ~~~l~~L~~L~l~~n~i~-~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~-L~~L~L~~n~i~~~~~~~~~~~~-- 146 (707)
|+++++|++|++++|.+. .++ .+..+++|++|++++|+++.+ +..+..+++ |++|++++|.++ ..+..+..++
T Consensus 326 l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~~l-p~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~ 402 (636)
T 4eco_A 326 LQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQITEI-PANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVS 402 (636)
T ss_dssp HTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEEEC-CTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSS
T ss_pred hccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccccc-cHhhhhhcccCcEEEccCCcCc-ccchhhhhcccC
Confidence 999999999999999999 566 899999999999999999955 456889999 999999999999 5566676654
Q ss_pred CCcEEEcCCCccCCCCchhhh-------CCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCC-
Q 038671 147 KLGTLDFSSNNITGSMPAEII-------HSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLT- 218 (707)
Q Consensus 147 ~L~~L~L~~n~i~~~~~~~~~-------~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~- 218 (707)
+|++|++++|.+++..+..+. .+++|+.|+|++|.++...+..+..+++|++|++++|+++......+....
T Consensus 403 ~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~ 482 (636)
T 4eco_A 403 VMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENE 482 (636)
T ss_dssp CEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTE
T ss_pred ccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccc
Confidence 899999999999988888887 788999999999999965556677799999999999999954444444333
Q ss_pred ------cccEEEccCCccCCCCCcccc--CcccCceEeeecccccccCchhhhhcccCCeeee------cCccCCCCCCc
Q 038671 219 ------QLERLDLSSNRLSNSIPKSLG--NLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDL------SHNFLGEEMPS 284 (707)
Q Consensus 219 ------~L~~L~l~~n~i~~~~~~~l~--~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l------~~n~l~~~~~~ 284 (707)
+|++|+|++|.++ .+|..+. .+++|+.|+|++|++++ .|..+..+++|+.|+| ++|.+.+..|.
T Consensus 483 ~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~ 560 (636)
T 4eco_A 483 NFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPE 560 (636)
T ss_dssp ECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCT
T ss_pred cccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChH
Confidence 9999999999999 6677776 99999999999999987 7888999999999999 56778889999
Q ss_pred ccccccccceEeccccccCCchhHhhccCCCceeEeeccCcccccCC
Q 038671 285 QICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDISYNELHGSIP 331 (707)
Q Consensus 285 ~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~l~~n~~~~~~~ 331 (707)
.+..+++|+.|++++|++. .+|..+. ++|+.|++++|++.+...
T Consensus 561 ~l~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~~~ 604 (636)
T 4eco_A 561 GITLCPSLTQLQIGSNDIR-KVNEKIT--PNISVLDIKDNPNISIDL 604 (636)
T ss_dssp TGGGCSSCCEEECCSSCCC-BCCSCCC--TTCCEEECCSCTTCEEEC
T ss_pred HHhcCCCCCEEECCCCcCC-ccCHhHh--CcCCEEECcCCCCccccH
Confidence 9999999999999999995 5676655 799999999999997543
No 264
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=4.5e-37 Score=341.89 Aligned_cols=337 Identities=19% Similarity=0.188 Sum_probs=252.8
Q ss_pred CCceeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeecc
Q 038671 4 NLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLE 83 (707)
Q Consensus 4 ~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~ 83 (707)
..+++++++|+++ .+|..+. ++|++|+|++|.+++..+.+|.++++|++|+|++|.|++..|+.|+++++|++|+++
T Consensus 32 ~~~~l~ls~~~L~-~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 108 (562)
T 3a79_B 32 LESMVDYSNRNLT-HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVS 108 (562)
T ss_dssp -CCEEECTTSCCC-SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECT
T ss_pred CCcEEEcCCCCCc-cCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECC
Confidence 3478999999999 5777665 799999999999998877899999999999999999999989999999999999999
Q ss_pred cccccccCCCCCCCCCccEEEeccCcccccc-CccccCCCCCcEEEcccccccccCCCCCCCCCCC--cEEEcCCCcc--
Q 038671 84 NNQLRGPIPNLRNLTSLVRVRLNQNHLTGNI-SESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKL--GTLDFSSNNI-- 158 (707)
Q Consensus 84 ~n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~-~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L--~~L~L~~n~i-- 158 (707)
+|.++.++.. .+++|++|++++|+++.+. +..|+.+++|++|++++|.++.. .+..+++| ++|++++|.+
T Consensus 109 ~N~l~~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~ 183 (562)
T 3a79_B 109 HNRLQNISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHI 183 (562)
T ss_dssp TSCCCEECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCC
T ss_pred CCcCCccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccc
Confidence 9999987776 8999999999999999876 47899999999999999999863 45556666 9999999998
Q ss_pred CCCCchhhhCCC--------------------------------------------------------------------
Q 038671 159 TGSMPAEIIHSS-------------------------------------------------------------------- 170 (707)
Q Consensus 159 ~~~~~~~~~~~~-------------------------------------------------------------------- 170 (707)
++..+..+..+.
T Consensus 184 ~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~ 263 (562)
T 3a79_B 184 KGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTW 263 (562)
T ss_dssp CSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECH
T ss_pred cccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcH
Confidence 555555544422
Q ss_pred -------------CCCEEeCCCCCCCCCCChhh-----------------------------------------------
Q 038671 171 -------------QLKVLDLSSNHIVGEMPSKL----------------------------------------------- 190 (707)
Q Consensus 171 -------------~L~~L~l~~n~l~~~~~~~~----------------------------------------------- 190 (707)
+|++|++++|.+++.+|..+
T Consensus 264 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~ 343 (562)
T 3a79_B 264 KCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPF 343 (562)
T ss_dssp HHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCC
T ss_pred HHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCc
Confidence 66777777777765555443
Q ss_pred ------hCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCC--CccccCcccCceEeeecccccc-cCchh
Q 038671 191 ------GKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSI--PKSLGNLVKLHYLNLSNNQFIK-KIPVE 261 (707)
Q Consensus 191 ------~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~--~~~l~~l~~L~~L~l~~n~l~~-~~~~~ 261 (707)
..+++|++|++++|.+++..+..+..+++|++|++++|.+++.. |..+.++++|+.|++++|++++ .....
T Consensus 344 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 423 (562)
T 3a79_B 344 IHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRT 423 (562)
T ss_dssp CCCCCCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCC
T ss_pred ccccCccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhh
Confidence 45566777777777776666666667777777777777776532 3456666777777777777665 33334
Q ss_pred hhhcccCCeeeecCccCCCCCCcccccccccceEeccccccCCchhHhhccCCCceeEeeccCcccccCCC-ccccccCc
Q 038671 262 LEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDISYNELHGSIPN-STAFRDAP 340 (707)
Q Consensus 262 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~l~~n~~~~~~~~-~~~~~~~~ 340 (707)
+..+++|++|++++|.+++..+..+. ++|+.|++++|+|+. +|..+..+++|+.|++++|+++..++. ...++...
T Consensus 424 ~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~-ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~ 500 (562)
T 3a79_B 424 CAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMS-IPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQ 500 (562)
T ss_dssp CCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCC-CCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCC
T ss_pred hcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCcc-cChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCC
Confidence 66667777777777776654444332 577777777777773 444445777777788888877755544 44455555
Q ss_pred hhhcccCcCcC
Q 038671 341 MEALQGNKGLC 351 (707)
Q Consensus 341 ~~~~~~~~~~c 351 (707)
...+.+|++.|
T Consensus 501 ~L~l~~N~~~c 511 (562)
T 3a79_B 501 YIWLHDNPWDC 511 (562)
T ss_dssp CEECCSCCBCC
T ss_pred EEEecCCCcCC
Confidence 66677777665
No 265
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.8e-38 Score=326.69 Aligned_cols=248 Identities=21% Similarity=0.328 Sum_probs=199.8
Q ss_pred HHHHhcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCch---hhhHHHHHHHHHHHhcCC--CCceeeeeeee
Q 038671 431 IIRVTNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSE---MASQQEFLNEVKTLTGIR--HRNIVKFYGFC 504 (707)
Q Consensus 431 ~~~~~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~~~~e~~~l~~l~--h~niv~~~~~~ 504 (707)
.....++|++.+.||+|+||.||+|. ..+++.||+|++....... ......+.+|+.++++++ |||++++++++
T Consensus 38 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~ 117 (320)
T 3a99_A 38 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF 117 (320)
T ss_dssp --CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEE
T ss_pred cCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEE
Confidence 34457889999999999999999995 5678999999986532211 012244667899999996 59999999999
Q ss_pred ecCCceeEEEeeecc-CcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeec-CCCCeEE
Q 038671 505 SHARHSFIVYEYLEM-GSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLD-LENEAHV 582 (707)
Q Consensus 505 ~~~~~~~lv~e~~~~-~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~-~~~~~kl 582 (707)
..++..++|+|++.+ ++|.+++... ..+++..++.++.||+.||+|||+. ||+||||||+||+++ .++.+||
T Consensus 118 ~~~~~~~lv~e~~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL 191 (320)
T 3a99_A 118 ERPDSFVLILERPEPVQDLFDFITER---GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKL 191 (320)
T ss_dssp ECSSEEEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEE
T ss_pred ecCCcEEEEEEcCCCCccHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEE
Confidence 999999999999976 8999998643 4589999999999999999999999 999999999999999 7889999
Q ss_pred eccccceecCCCCCCccccccccCCCCccccccCCC-CccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhh
Q 038671 583 SDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEM 661 (707)
Q Consensus 583 ~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 661 (707)
+|||++...... ......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||+.... ...
T Consensus 192 ~Dfg~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~----------~~~-- 257 (320)
T 3a99_A 192 IDFGSGALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE----------IIR-- 257 (320)
T ss_dssp CCCTTCEECCSS--CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH----------HHH--
T ss_pred eeCccccccccc--cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh----------hhc--
Confidence 999999876533 2344578999999999887666 6789999999999999999999863211 111
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 038671 662 LDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQL 704 (707)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~ 704 (707)
.....+. ..+.++.+++.+||+.||++||+++|+++.
T Consensus 258 --~~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 258 --GQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp --CCCCCSS----CCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred --ccccccc----cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1111111 123458899999999999999999999873
No 266
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=6.4e-37 Score=323.25 Aligned_cols=200 Identities=24% Similarity=0.286 Sum_probs=168.9
Q ss_pred HhcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCC-CC-----ceeeeeeeeec
Q 038671 434 VTNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR-HR-----NIVKFYGFCSH 506 (707)
Q Consensus 434 ~~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~~~~~~~~ 506 (707)
+.++|++.+.||+|+||.||+|. ..+++.||||++... .....++..|+++++.++ |+ +++++++++..
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~ 127 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK----KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF 127 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc----HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc
Confidence 45789999999999999999995 457889999998642 223456777888888774 44 49999999999
Q ss_pred CCceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeec--CCCCeEEec
Q 038671 507 ARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLD--LENEAHVSD 584 (707)
Q Consensus 507 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~--~~~~~kl~D 584 (707)
.+..++||||+. ++|.+++.... .+.+++..++.++.|++.||+|||++. .||+||||||+||+++ .++.+||+|
T Consensus 128 ~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~-~~ivHrDlkp~NIll~~~~~~~~kL~D 204 (382)
T 2vx3_A 128 RNHLCLVFEMLS-YNLYDLLRNTN-FRGVSLNLTRKFAQQMCTALLFLATPE-LSIIHCDLKPENILLCNPKRSAIKIVD 204 (382)
T ss_dssp TTEEEEEEECCC-CBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHTSTT-TCEECCCCSGGGEEESSTTSCCEEECC
T ss_pred CCceEEEEecCC-CCHHHHHhhcC-cCCCCHHHHHHHHHHHHHHHHHhccCC-CCEEcCCCCcccEEEecCCCCcEEEEe
Confidence 999999999996 59999886543 245899999999999999999999521 1999999999999995 477899999
Q ss_pred cccceecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 038671 585 FGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDF 643 (707)
Q Consensus 585 fg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~ 643 (707)
||++...... .....||+.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 205 FG~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~ 260 (382)
T 2vx3_A 205 FGSSCQLGQR---IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG 260 (382)
T ss_dssp CTTCEETTCC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccCceecccc---cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 9999876432 3346789999999999999999999999999999999999999974
No 267
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.2e-37 Score=330.42 Aligned_cols=247 Identities=22% Similarity=0.301 Sum_probs=186.6
Q ss_pred cCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcC-CCCceeeeeeeeecCCceeEEE
Q 038671 436 NDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGI-RHRNIVKFYGFCSHARHSFIVY 514 (707)
Q Consensus 436 ~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 514 (707)
.+|+..+.||+|+||+||.....+|+.||||++...... .+.+|+++++.+ +||||+++++++.+.+..++||
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~------~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~ 97 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS------FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAI 97 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE------ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEE
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH------HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEE
Confidence 468888999999999977666668999999998654322 245799999999 7999999999999999999999
Q ss_pred eeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecC---C--CCeEEeccccce
Q 038671 515 EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDL---E--NEAHVSDFGTAK 589 (707)
Q Consensus 515 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~---~--~~~kl~Dfg~~~ 589 (707)
||+. |+|.+++.... ...++..++.++.||+.||+|||+. ||+||||||+||+++. + ..+||+|||+++
T Consensus 98 E~~~-g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~ 171 (432)
T 3p23_A 98 ELCA-ATLQEYVEQKD--FAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCK 171 (432)
T ss_dssp ECCS-EEHHHHHHSSS--CCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEE
T ss_pred ECCC-CCHHHHHHhcC--CCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEeccccee
Confidence 9996 59999986543 2355567789999999999999999 9999999999999953 2 357899999998
Q ss_pred ecCCCC---CCccccccccCCCCccccc---cCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccccchhhhhhhhhc
Q 038671 590 FLKPDS---SNWAELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSISSSSSNLEIALNEML 662 (707)
Q Consensus 590 ~~~~~~---~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 662 (707)
...... .......||+.|+|||++. +..++.++|||||||++|||++ |+.||.... ...........
T Consensus 172 ~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~------~~~~~~~~~~~ 245 (432)
T 3p23_A 172 KLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSL------QRQANILLGAC 245 (432)
T ss_dssp CC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTT------THHHHHHTTCC
T ss_pred eccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhh------HHHHHHHhccC
Confidence 765432 2234467999999999987 4567889999999999999999 999985211 11111111111
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 663 DPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 663 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
...... ........+.+++.+||+.||.+|||+.++++
T Consensus 246 ~~~~~~---~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 246 SLDCLH---PEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp CCTTSC---TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CccccC---ccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 111111 11234556889999999999999999999985
No 268
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=4.4e-37 Score=316.72 Aligned_cols=253 Identities=22% Similarity=0.323 Sum_probs=181.2
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIV 513 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 513 (707)
.++|++.+.||+|+||.||+|.. .+|+.||+|++...... ....+.+.++..+++.++||||+++++++..++..++|
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv 102 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNK-EENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA 102 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCH-HHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccc-hHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence 36789999999999999999965 47999999998765322 22334455566678888999999999999999999999
Q ss_pred EeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCCCeeecCCCCeEEeccccceecC
Q 038671 514 YEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHN-DCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLK 592 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~ 592 (707)
|||+ ++.+..+... ....+++..++.++.|++.||+|||+ . |++||||||+||+++.++.+||+|||++....
T Consensus 103 ~e~~-~~~~~~l~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 176 (318)
T 2dyl_A 103 MELM-GTCAEKLKKR--MQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLV 176 (318)
T ss_dssp ECCC-SEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred Eecc-CCcHHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhcc
Confidence 9999 5566655532 23468999999999999999999998 6 89999999999999999999999999997655
Q ss_pred CCCCCccccccccCCCCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCC
Q 038671 593 PDSSNWAELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLP 667 (707)
Q Consensus 593 ~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (707)
... ......+++.|+|||.+. +..++.++||||||+++|+|++|+.||..... .............+..+
T Consensus 177 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~~~~~~~~~~~~~~~ 251 (318)
T 2dyl_A 177 DDK-AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT----DFEVLTKVLQEEPPLLP 251 (318)
T ss_dssp -----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS----HHHHHHHHHHSCCCCCC
T ss_pred CCc-cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc----cHHHHHHHhccCCCCCC
Confidence 332 223457899999999984 45688899999999999999999999963211 01111111111112222
Q ss_pred CCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 668 TPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 668 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
... ..+.++.+++.+||+.||.+||+++++++
T Consensus 252 ~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 252 GHM----GFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp SSS----CCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ccC----CCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 211 22345889999999999999999999876
No 269
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=2.3e-37 Score=326.41 Aligned_cols=258 Identities=19% Similarity=0.290 Sum_probs=197.5
Q ss_pred hcCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCC-----------CCceeeeee
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR-----------HRNIVKFYG 502 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~~~~ 502 (707)
.++|++.+.||+|+||.||+|. ..+++.||+|++... ....+.+.+|++++++++ ||||+++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~ 93 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD----KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLD 93 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC----ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHH
Confidence 3679999999999999999996 467899999998642 234566788999988876 899999999
Q ss_pred eeecCC----ceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeec---
Q 038671 503 FCSHAR----HSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLD--- 575 (707)
Q Consensus 503 ~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~--- 575 (707)
++...+ ..++||||+ +++|.+++.... ...+++..++.++.||+.||+|||+++ ||+||||||+||+++
T Consensus 94 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~ 169 (373)
T 1q8y_A 94 HFNHKGPNGVHVVMVFEVL-GENLLALIKKYE-HRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVD 169 (373)
T ss_dssp EEEEEETTEEEEEEEECCC-CEEHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEE
T ss_pred HhhccCCCCceEEEEEecC-CCCHHHHHHHhh-ccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccC
Confidence 987654 789999999 899999986533 345899999999999999999999953 899999999999994
Q ss_pred ---CCCCeEEeccccceecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccc--
Q 038671 576 ---LENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSS-- 650 (707)
Q Consensus 576 ---~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~-- 650 (707)
..+.+||+|||++...... .....||+.|+|||++.+..++.++||||||+++|||++|+.||.........
T Consensus 170 ~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~ 246 (373)
T 1q8y_A 170 SPENLIQIKIADLGNACWYDEH---YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 246 (373)
T ss_dssp TTTTEEEEEECCCTTCEETTBC---CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CH
T ss_pred CCcCcceEEEcccccccccCCC---CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCCh
Confidence 3447999999999876533 23457899999999999999999999999999999999999999743321100
Q ss_pred cchhhhhhhhh-----------------cCC-----CCC------------CCCcchHHHHHHHHHHHHhccCCCCCCCC
Q 038671 651 SSNLEIALNEM-----------------LDP-----RLP------------TPSHNVQDKLISIMEVAISCLDESPESRP 696 (707)
Q Consensus 651 ~~~~~~~~~~~-----------------~~~-----~~~------------~~~~~~~~~~~~l~~li~~cl~~~P~~Rp 696 (707)
........... ... ... .........+.++.+++.+||+.||++||
T Consensus 247 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 326 (373)
T 1q8y_A 247 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA 326 (373)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCB
T ss_pred HHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccC
Confidence 00000000000 000 000 00112245677899999999999999999
Q ss_pred CHHHHHH
Q 038671 697 TIQKVSQ 703 (707)
Q Consensus 697 s~~~l~~ 703 (707)
|++|+++
T Consensus 327 t~~ell~ 333 (373)
T 1q8y_A 327 DAGGLVN 333 (373)
T ss_dssp CHHHHHT
T ss_pred CHHHHhh
Confidence 9999986
No 270
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.7e-36 Score=343.58 Aligned_cols=330 Identities=20% Similarity=0.198 Sum_probs=268.4
Q ss_pred CCCceeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeec
Q 038671 3 SNLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTL 82 (707)
Q Consensus 3 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l 82 (707)
+++++|||++|+|++..+.+|+++++|++|+|++|+|+++.+++|.++++|++|+|++|+|++..+++|+++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 37999999999999888899999999999999999999888889999999999999999999888889999999999999
Q ss_pred ccccccccCC-CCCCCCCccEEEeccCcccccc-CccccCCCCCcEEEcccccccccCCCCCCC----------------
Q 038671 83 ENNQLRGPIP-NLRNLTSLVRVRLNQNHLTGNI-SESFGIHPNLAFIDLSHNYFYGEISSDWGR---------------- 144 (707)
Q Consensus 83 ~~n~i~~~~~-~l~~l~~L~~L~l~~n~l~~~~-~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~---------------- 144 (707)
++|+++.+++ .|.++++|++|++++|+++.+. +..+..+++|++|+|++|.++.+.+..|..
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n 211 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 211 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccC
Confidence 9999998876 4899999999999999998764 567888999999999999886543322211
Q ss_pred --------------------------------------------------------------------------------
Q 038671 145 -------------------------------------------------------------------------------- 144 (707)
Q Consensus 145 -------------------------------------------------------------------------------- 144 (707)
T Consensus 212 ~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~ 291 (635)
T 4g8a_A 212 PMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYL 291 (635)
T ss_dssp CCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECC
T ss_pred cccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhh
Confidence
Q ss_pred -----------------------------------CCCCcEEEcCCCccCCCCch-------------------hhhCCC
Q 038671 145 -----------------------------------CPKLGTLDFSSNNITGSMPA-------------------EIIHSS 170 (707)
Q Consensus 145 -----------------------------------~~~L~~L~L~~n~i~~~~~~-------------------~~~~~~ 170 (707)
..+|+.|++.+|.+...... ....++
T Consensus 292 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~ 371 (635)
T 4g8a_A 292 DYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLP 371 (635)
T ss_dssp CSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCT
T ss_pred cccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCccccccc
Confidence 11223333333332211100 111245
Q ss_pred CCCEEeCCCCCCCC--------------------------------------------------CCChhhhCCCCCcEEE
Q 038671 171 QLKVLDLSSNHIVG--------------------------------------------------EMPSKLGKLSSLIKLI 200 (707)
Q Consensus 171 ~L~~L~l~~n~l~~--------------------------------------------------~~~~~~~~l~~L~~L~ 200 (707)
+|+.|++++|.+.. .....|..+++++.++
T Consensus 372 ~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ 451 (635)
T 4g8a_A 372 SLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLD 451 (635)
T ss_dssp TCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEE
T ss_pred ccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhcccccccccccccccccccccc
Confidence 56666666655421 1123455667777888
Q ss_pred ecCCccccCCccccCCCCcccEEEccCCcc-CCCCCccccCcccCceEeeecccccccCchhhhhcccCCeeeecCccCC
Q 038671 201 LNSNQLCGQLSLELGSLTQLERLDLSSNRL-SNSIPKSLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLG 279 (707)
Q Consensus 201 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i-~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 279 (707)
++.|.+....+..+..+++|+.|+|++|.+ ....|..|..+++|++|+|++|++++..+..|.++++|++|+|++|+|+
T Consensus 452 ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~ 531 (635)
T 4g8a_A 452 ISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFF 531 (635)
T ss_dssp CTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCC
T ss_pred ccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCC
Confidence 888888877788888899999999999975 4467888999999999999999999999999999999999999999998
Q ss_pred CCCCcccccccccceEeccccccCCchhHhhccC-CCceeEeeccCcccccCCC
Q 038671 280 EEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEEL-HGLSYIDISYNELHGSIPN 332 (707)
Q Consensus 280 ~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~-~~L~~l~l~~n~~~~~~~~ 332 (707)
+..+..|..+++|+.|++++|+|++..|..+..+ ++|+.|++++|+|+|.|..
T Consensus 532 ~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~ 585 (635)
T 4g8a_A 532 SLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEH 585 (635)
T ss_dssp BCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGG
T ss_pred CCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCc
Confidence 8888889999999999999999999988888887 6899999999999999864
No 271
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=9.5e-37 Score=340.97 Aligned_cols=334 Identities=23% Similarity=0.239 Sum_probs=292.4
Q ss_pred CCCCceeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeee
Q 038671 2 LSNLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLT 81 (707)
Q Consensus 2 l~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 81 (707)
+++++.|++++|.++...+..|+.+++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 57889999999999988777789999999999999999988888999999999999999999999899999999999999
Q ss_pred cccccccccCCC-CCCCCCccEEEeccCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccCC
Q 038671 82 LENNQLRGPIPN-LRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITG 160 (707)
Q Consensus 82 l~~n~i~~~~~~-l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~ 160 (707)
|++|.++.+++. |..+++|++|+|++|.++++.+..|..+++|++|+|++|.++.+ .+..+++|+.|++++|.+++
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~l~~L~~L~l~~n~l~~ 206 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST 206 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC---CGGGCTTCSEEECCSSCCSE
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc---ChhhhhhhhhhhcccCcccc
Confidence 999999988876 68999999999999999999999999999999999999999876 36678999999999999874
Q ss_pred CCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccccC
Q 038671 161 SMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGN 240 (707)
Q Consensus 161 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~ 240 (707)
+...++|+.|++++|.+....+. + .++|+.|++++|.+++ +..+..+++|+.|+|++|.+++..|..|.+
T Consensus 207 -----l~~~~~L~~L~ls~n~l~~~~~~-~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 276 (597)
T 3oja_B 207 -----LAIPIAVEELDASHNSINVVRGP-V--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVK 276 (597)
T ss_dssp -----EECCTTCSEEECCSSCCCEEECS-C--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTT
T ss_pred -----ccCCchhheeeccCCcccccccc-c--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcC
Confidence 34567899999999999844332 2 3689999999999985 467899999999999999999999999999
Q ss_pred cccCceEeeecccccccCchhhhhcccCCeeeecCccCCCCCCcccccccccceEeccccccCCchhHhhccCCCceeEe
Q 038671 241 LVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYID 320 (707)
Q Consensus 241 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~ 320 (707)
+++|+.|+|++|.+++. +..+..+++|+.|+|++|.++ .+|..+..+++|+.|++++|++.+.. +..+++|+.|+
T Consensus 277 l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~L~~L~ 351 (597)
T 3oja_B 277 MQRLERLYISNNRLVAL-NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLT 351 (597)
T ss_dssp CSSCCEEECTTSCCCEE-ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEE
T ss_pred ccCCCEEECCCCCCCCC-CcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC---hhhcCCCCEEE
Confidence 99999999999999774 556677999999999999996 56777899999999999999998763 67789999999
Q ss_pred eccCcccccCCCccccccCchhhcccCcCcCCCC
Q 038671 321 ISYNELHGSIPNSTAFRDAPMEALQGNKGLCGDI 354 (707)
Q Consensus 321 l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~ 354 (707)
+++|+|+|.+.. ..+.......+.++...|+..
T Consensus 352 l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~C~~~ 384 (597)
T 3oja_B 352 LSHNDWDCNSLR-ALFRNVARPAVDDADQHCKID 384 (597)
T ss_dssp CCSSCEEHHHHH-HHTTTCCTTTBCCCCCCCCTT
T ss_pred eeCCCCCChhHH-HHHHHHhhhccccccccCCcc
Confidence 999999997632 223334444556666777653
No 272
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=7.6e-37 Score=320.22 Aligned_cols=252 Identities=19% Similarity=0.302 Sum_probs=195.7
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-CCC-cEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCc------eeeeeeeeec
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-PSG-EIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRN------IVKFYGFCSH 506 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-~~~-~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~~~~~~~~ 506 (707)
.++|++.+.||+|+||.||+|.. .++ +.||+|++... ....+.+.+|+.+++.++|++ ++.+++++..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 93 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV----GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF 93 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc----ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee
Confidence 47899999999999999999964 344 78999998642 234567888999999887655 8999999999
Q ss_pred CCceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeee------------
Q 038671 507 ARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLL------------ 574 (707)
Q Consensus 507 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~------------ 574 (707)
.+..++||||+ ++++.+++.... ...+++..++.++.||+.||+|||++ ||+||||||+||++
T Consensus 94 ~~~~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~ 168 (355)
T 2eu9_A 94 HGHMCIAFELL-GKNTFEFLKENN-FQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEH 168 (355)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC
T ss_pred CCeEEEEEecc-CCChHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccc
Confidence 99999999999 555655654332 24589999999999999999999999 99999999999999
Q ss_pred -------cCCCCeEEeccccceecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccc
Q 038671 575 -------DLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSI 647 (707)
Q Consensus 575 -------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~ 647 (707)
+.++.+||+|||++...... .....||+.|+|||++.+..++.++||||||+++|||++|+.||......
T Consensus 169 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 245 (355)
T 2eu9_A 169 KSCEEKSVKNTSIRVADFGSATFDHEH---HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR 245 (355)
T ss_dssp -CCCEEEESCCCEEECCCTTCEETTSC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred ccccccccCCCcEEEeecCcccccccc---ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH
Confidence 56789999999999875432 23457999999999999989999999999999999999999999743221
Q ss_pred ccccchhhhhhhhhcCC-------------------------------------CCCCCCcchHHHHHHHHHHHHhccCC
Q 038671 648 SSSSSNLEIALNEMLDP-------------------------------------RLPTPSHNVQDKLISIMEVAISCLDE 690 (707)
Q Consensus 648 ~~~~~~~~~~~~~~~~~-------------------------------------~~~~~~~~~~~~~~~l~~li~~cl~~ 690 (707)
. ....+.....+ ............+.++.+++.+||+.
T Consensus 246 ~-----~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~ 320 (355)
T 2eu9_A 246 E-----HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEF 320 (355)
T ss_dssp H-----HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCS
T ss_pred H-----HHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcC
Confidence 0 00000000000 00000001123355789999999999
Q ss_pred CCCCCCCHHHHHH
Q 038671 691 SPESRPTIQKVSQ 703 (707)
Q Consensus 691 ~P~~Rps~~~l~~ 703 (707)
||++|||+.|+++
T Consensus 321 dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 321 DPAQRITLAEALL 333 (355)
T ss_dssp STTTSCCHHHHTT
T ss_pred ChhhCcCHHHHhc
Confidence 9999999999985
No 273
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=3.4e-37 Score=310.95 Aligned_cols=231 Identities=13% Similarity=0.083 Sum_probs=184.3
Q ss_pred hcCCCCCceeeecCCeeEEEEEc-CCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEE
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAEL-PSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIV 513 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 513 (707)
.++|++.+.||+|+||.||+|+. .+|+.||+|++...........+.+.+|+..+.+++||||+++++++.+.+..|+|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 36799999999999999999965 46899999999876554445567899999999999999999999999999999999
Q ss_pred EeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCC
Q 038671 514 YEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKP 593 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~ 593 (707)
|||++|++|.+++... ....++.+++.|++.||+|||++ ||+||||||+||+++.++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~------- 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA------- 174 (286)
T ss_dssp EECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC-------
T ss_pred EEecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc-------
Confidence 9999999999998532 35567889999999999999999 99999999999999999999998543
Q ss_pred CCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCcch
Q 038671 594 DSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHNV 673 (707)
Q Consensus 594 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (707)
|++ .++.++||||||+++|||+||+.||......... .... .......+.+....
T Consensus 175 -------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~----~~~~-~~~~~~~~~~~~~~ 229 (286)
T 3uqc_A 175 -------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGL----APAE-RDTAGQPIEPADID 229 (286)
T ss_dssp -------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCS----EECC-BCTTSCBCCHHHHC
T ss_pred -------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhh----HHHH-HHhccCCCChhhcc
Confidence 333 2788999999999999999999999753321100 0000 00111111111111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 038671 674 QDKLISIMEVAISCLDESPESRPTIQKVSQLLK 706 (707)
Q Consensus 674 ~~~~~~l~~li~~cl~~~P~~Rps~~~l~~~L~ 706 (707)
...+.++.+++.+||+.||++| |+.|+++.|+
T Consensus 230 ~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~ 261 (286)
T 3uqc_A 230 RDIPFQISAVAARSVQGDGGIR-SASTLLNLMQ 261 (286)
T ss_dssp TTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHcccCCccC-CHHHHHHHHH
Confidence 2234568999999999999999 9999999874
No 274
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=8.1e-37 Score=339.60 Aligned_cols=327 Identities=25% Similarity=0.285 Sum_probs=207.8
Q ss_pred CCCCCceeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCccc-CCccccCCCCCCe
Q 038671 1 NLSNLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGA-IPKEYGNLVKLTL 79 (707)
Q Consensus 1 nl~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~-~~~~~~~l~~L~~ 79 (707)
++++|++|+|++|.+++..|+.|+.+++|++|+|++|++++..+..|.++++|++|+|++|.+++. .|..|+++++|++
T Consensus 48 ~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~ 127 (549)
T 2z81_A 48 ACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQT 127 (549)
T ss_dssp SCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCE
T ss_pred cCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccE
Confidence 478999999999999999889999999999999999999977777799999999999999999864 4678999999999
Q ss_pred eeccccc-ccccCC-CCCCCCCccEEEeccCccccccCccccC------------------------CCCCcEEEccccc
Q 038671 80 LTLENNQ-LRGPIP-NLRNLTSLVRVRLNQNHLTGNISESFGI------------------------HPNLAFIDLSHNY 133 (707)
Q Consensus 80 L~l~~n~-i~~~~~-~l~~l~~L~~L~l~~n~l~~~~~~~~~~------------------------~~~L~~L~L~~n~ 133 (707)
|++++|. +..+++ .+.++++|++|++++|++++..+..+.. +++|++|++++|.
T Consensus 128 L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~ 207 (549)
T 2z81_A 128 LRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTN 207 (549)
T ss_dssp EEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCB
T ss_pred EECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCc
Confidence 9999998 565654 6899999999999999998876666654 4566666666666
Q ss_pred ccccC--C-CCCCCC-----------------------------------------------------------------
Q 038671 134 FYGEI--S-SDWGRC----------------------------------------------------------------- 145 (707)
Q Consensus 134 i~~~~--~-~~~~~~----------------------------------------------------------------- 145 (707)
+++.. + .....+
T Consensus 208 l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~ 287 (549)
T 2z81_A 208 LARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVT 287 (549)
T ss_dssp CTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEE
T ss_pred cccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhccccccc
Confidence 65421 0 000011
Q ss_pred ----------------------CCCcEEEcCCCccCCCCchhh-hCCCCCCEEeCCCCCCCCCCC---hhhhCCCCCcEE
Q 038671 146 ----------------------PKLGTLDFSSNNITGSMPAEI-IHSSQLKVLDLSSNHIVGEMP---SKLGKLSSLIKL 199 (707)
Q Consensus 146 ----------------------~~L~~L~L~~n~i~~~~~~~~-~~~~~L~~L~l~~n~l~~~~~---~~~~~l~~L~~L 199 (707)
++|+.|++++|.++ ..+..+ ..+++|+.|++++|++.+..| ..+..+++|++|
T Consensus 288 l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L 366 (549)
T 2z81_A 288 IRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTL 366 (549)
T ss_dssp EESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEE
T ss_pred ccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEE
Confidence 22333333333333 122222 345666666666666654332 224555666666
Q ss_pred EecCCccccCCc--cccCCCCcccEEEccCCccCCCCCccccCcccCceEeeecccccccCchh----------------
Q 038671 200 ILNSNQLCGQLS--LELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPVE---------------- 261 (707)
Q Consensus 200 ~l~~n~l~~~~~--~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~---------------- 261 (707)
++++|++++..+ ..+..+++|++|++++|+++ .+|..+..+++|++|++++|.++......
T Consensus 367 ~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l~~~~~~~L~~L~Ls~N~l~~ 445 (549)
T 2z81_A 367 VLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNLDS 445 (549)
T ss_dssp ECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSCCCTTSCTTCSEEECCSSCCSC
T ss_pred EccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcccccchhcCCceEEECCCCChhh
Confidence 666666653321 33556666666666666666 34555555566666666666654322110
Q ss_pred -hhhcccCCeeeecCccCCCCCCcccccccccceEeccccccCCchhHhhccCCCceeEeeccCcccccCC
Q 038671 262 -LEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDISYNELHGSIP 331 (707)
Q Consensus 262 -~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~l~~n~~~~~~~ 331 (707)
...+++|++|++++|+++ .+|. ...+++|+.|++++|++++..+..+..+++|+.|++++|+|.|.+|
T Consensus 446 ~~~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 446 FSLFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp CCCCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred hcccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 123444555555555553 2232 2344555555555555555444445555555555555555555544
No 275
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.2e-35 Score=309.77 Aligned_cols=304 Identities=25% Similarity=0.371 Sum_probs=254.6
Q ss_pred CCCCceeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeee
Q 038671 2 LSNLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLT 81 (707)
Q Consensus 2 l~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 81 (707)
+++|++|++++|.++ .++ .+..+++|++|++++|++++..+ +.++++|++|++++|.+++. ..|.++++|++|+
T Consensus 43 l~~L~~L~l~~~~i~-~~~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~~L~ 116 (347)
T 4fmz_A 43 LESITKLVVAGEKVA-SIQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTNLRELY 116 (347)
T ss_dssp HTTCSEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCSEEE
T ss_pred cccccEEEEeCCccc-cch-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc--hHHcCCCcCCEEE
Confidence 468899999999998 444 48889999999999999985433 88999999999999999853 4689999999999
Q ss_pred cccccccccCCCCCCCCCccEEEeccCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccCCC
Q 038671 82 LENNQLRGPIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGS 161 (707)
Q Consensus 82 l~~n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~ 161 (707)
+++|.+..+++ +..+++|+.|++++|...... ..+..+++|++|++++|.+....+ +..+++|++|++++|.+++.
T Consensus 117 l~~n~i~~~~~-~~~l~~L~~L~l~~n~~~~~~-~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~ 192 (347)
T 4fmz_A 117 LNEDNISDISP-LANLTKMYSLNLGANHNLSDL-SPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDI 192 (347)
T ss_dssp CTTSCCCCCGG-GTTCTTCCEEECTTCTTCCCC-GGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCC
T ss_pred CcCCcccCchh-hccCCceeEEECCCCCCcccc-cchhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccc
Confidence 99999987655 888999999999999655333 348889999999999999886544 78899999999999998854
Q ss_pred CchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccccCc
Q 038671 162 MPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNL 241 (707)
Q Consensus 162 ~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l 241 (707)
.+ +..+++|+.|++++|.+.+..+ +..+++|++|++++|.+++..+ +..+++|++|++++|.+++. ..+..+
T Consensus 193 ~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l 264 (347)
T 4fmz_A 193 SP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDL 264 (347)
T ss_dssp GG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTC
T ss_pred cc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcC
Confidence 43 7888999999999999875443 7888999999999999985544 88899999999999999864 468888
Q ss_pred ccCceEeeecccccccCchhhhhcccCCeeeecCccCCCCCCcccccccccceEeccccccCCchhHhhccCCCceeEee
Q 038671 242 VKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDI 321 (707)
Q Consensus 242 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~l 321 (707)
++|++|++++|++++. ..+..+++|+.|++++|.+++..+..+..+++|+.|++++|++++..| +..+++|+.|++
T Consensus 265 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l 340 (347)
T 4fmz_A 265 TKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADF 340 (347)
T ss_dssp TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESS
T ss_pred CCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeeh
Confidence 9999999999998765 458888999999999999988888888899999999999999988766 788999999999
Q ss_pred ccCccc
Q 038671 322 SYNELH 327 (707)
Q Consensus 322 ~~n~~~ 327 (707)
++|+++
T Consensus 341 ~~N~i~ 346 (347)
T 4fmz_A 341 ANQVIK 346 (347)
T ss_dssp SCC---
T ss_pred hhhccc
Confidence 999875
No 276
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.9e-36 Score=343.91 Aligned_cols=321 Identities=23% Similarity=0.302 Sum_probs=276.0
Q ss_pred CCCCCceeeccCCeeeecCCccccCCCCCCeEECCCCc-ccc-ccCcCccCC-------CCCcEEEcccCcCcccCCc--
Q 038671 1 NLSNLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNK-LCG-SIPHSLGNL-------TQITFLTLFDNALSGAIPK-- 69 (707)
Q Consensus 1 nl~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~-i~~-~~~~~~~~l-------~~L~~L~L~~n~i~~~~~~-- 69 (707)
+|++|++|+|++|++.+.+|..|+++++|++|+|++|+ +++ .+|..+.++ ++|++|+|++|.++ .+|.
T Consensus 489 ~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~ 567 (876)
T 4ecn_A 489 NLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASA 567 (876)
T ss_dssp GCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHH
T ss_pred cCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChh
Confidence 47899999999999999999999999999999999998 887 677765555 49999999999999 7787
Q ss_pred cccCCCCCCeeecccccccccCCCCCCCCCccEEEeccCccccccCccccCCCC-CcEEEcccccccccCCCCCCCCCC-
Q 038671 70 EYGNLVKLTLLTLENNQLRGPIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPN-LAFIDLSHNYFYGEISSDWGRCPK- 147 (707)
Q Consensus 70 ~~~~l~~L~~L~l~~n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~-L~~L~L~~n~i~~~~~~~~~~~~~- 147 (707)
.|+++++|++|+|++|.++.++ .+..+++|+.|+|++|+++. .+..+..+++ |+.|+|++|.++ ..+..+..++.
T Consensus 568 ~l~~L~~L~~L~Ls~N~l~~lp-~~~~L~~L~~L~Ls~N~l~~-lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~ 644 (876)
T 4ecn_A 568 SLQKMVKLGLLDCVHNKVRHLE-AFGTNVKLTDLKLDYNQIEE-IPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVY 644 (876)
T ss_dssp HHTTCTTCCEEECTTSCCCBCC-CCCTTSEESEEECCSSCCSC-CCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSS
T ss_pred hhhcCCCCCEEECCCCCcccch-hhcCCCcceEEECcCCcccc-chHHHhhccccCCEEECcCCCCC-cCchhhhccccC
Confidence 9999999999999999999666 89999999999999999994 4556888998 999999999999 45667776654
Q ss_pred -CcEEEcCCCccCCCCchhh---h--CCCCCCEEeCCCCCCCCCCChh-hhCCCCCcEEEecCCccccCCccccCC----
Q 038671 148 -LGTLDFSSNNITGSMPAEI---I--HSSQLKVLDLSSNHIVGEMPSK-LGKLSSLIKLILNSNQLCGQLSLELGS---- 216 (707)
Q Consensus 148 -L~~L~L~~n~i~~~~~~~~---~--~~~~L~~L~l~~n~l~~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~---- 216 (707)
|+.|+|++|.+++..+... . .+++|+.|+|++|.++ .+|.. +..+++|+.|+|++|+++......+..
T Consensus 645 ~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~ 723 (876)
T 4ecn_A 645 VMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGN 723 (876)
T ss_dssp CEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSC
T ss_pred CCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCCccChHHhcccccc
Confidence 9999999999987654322 2 3458999999999999 45554 458999999999999999443333332
Q ss_pred ---CCcccEEEccCCccCCCCCcccc--CcccCceEeeecccccccCchhhhhcccCCeeeecC------ccCCCCCCcc
Q 038671 217 ---LTQLERLDLSSNRLSNSIPKSLG--NLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSH------NFLGEEMPSQ 285 (707)
Q Consensus 217 ---l~~L~~L~l~~n~i~~~~~~~l~--~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~------n~l~~~~~~~ 285 (707)
+++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ .|..+..+++|+.|+|++ |.+.+..|..
T Consensus 724 l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~ 801 (876)
T 4ecn_A 724 YKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTG 801 (876)
T ss_dssp CTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTT
T ss_pred ccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHH
Confidence 239999999999999 6677776 89999999999999987 677889999999999976 7788899999
Q ss_pred cccccccceEeccccccCCchhHhhccCCCceeEeeccCcccccCC
Q 038671 286 ICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDISYNELHGSIP 331 (707)
Q Consensus 286 ~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~l~~n~~~~~~~ 331 (707)
+..+++|+.|++++|++ +.+|..+. ++|+.|++++|++....+
T Consensus 802 l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~ 844 (876)
T 4ecn_A 802 ITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDV 844 (876)
T ss_dssp GGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEEC
T ss_pred HhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccCh
Confidence 99999999999999999 56676655 699999999999986544
No 277
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=4.3e-35 Score=317.93 Aligned_cols=322 Identities=27% Similarity=0.378 Sum_probs=184.8
Q ss_pred CCceeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeecc
Q 038671 4 NLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLE 83 (707)
Q Consensus 4 ~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~ 83 (707)
+|+.|+++++.++ .+| .+..+++|++|+|++|.+++..+ +.++++|++|++++|.+++..+ ++++++|++|+++
T Consensus 47 ~l~~L~l~~~~i~-~l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~ 120 (466)
T 1o6v_A 47 QVTTLQADRLGIK-SID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLF 120 (466)
T ss_dssp TCCEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECC
T ss_pred cccEEecCCCCCc-cCc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECC
Confidence 4455555555554 233 24445555555555555553222 4555555555555555543322 4455555555555
Q ss_pred cccccccCCCCCCCCCccEEEeccCccccccC-------------------ccccCCCCCcEEEcccccccccCCCCCCC
Q 038671 84 NNQLRGPIPNLRNLTSLVRVRLNQNHLTGNIS-------------------ESFGIHPNLAFIDLSHNYFYGEISSDWGR 144 (707)
Q Consensus 84 ~n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~~-------------------~~~~~~~~L~~L~L~~n~i~~~~~~~~~~ 144 (707)
+|.+..+++ +..+++|++|++++|.+..+.. ..+..+++|++|++++|.++.+ ..+..
T Consensus 121 ~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~ 197 (466)
T 1o6v_A 121 NNQITDIDP-LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI--SVLAK 197 (466)
T ss_dssp SSCCCCCGG-GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGG
T ss_pred CCCCCCChH-HcCCCCCCEEECCCCccCCChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC--hhhcc
Confidence 555544332 4445555555555554443321 1255666666666666666544 23566
Q ss_pred CCCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEE
Q 038671 145 CPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLD 224 (707)
Q Consensus 145 ~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 224 (707)
+++|++|++++|.+++..+ +..+++|+.|++++|.+++. ..+..+++|++|++++|.+++..+ +..+++|+.|+
T Consensus 198 l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 271 (466)
T 1o6v_A 198 LTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELK 271 (466)
T ss_dssp CTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEE
T ss_pred CCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEE
Confidence 6667777776666664433 55566677777777666532 346666677777777777664433 66667777777
Q ss_pred ccCCccCCCCCccccCcccCceEeeecccccccCchhhhhcccCCeeeecCccCCCCCCcccccccccceEeccccccCC
Q 038671 225 LSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSG 304 (707)
Q Consensus 225 l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~ 304 (707)
+++|.+++..+ +..+++|+.|++++|++.+..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|++++
T Consensus 272 l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~ 345 (466)
T 1o6v_A 272 LGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSD 345 (466)
T ss_dssp CCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred CCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCC
Confidence 77777765443 6666777777777777655433 5666777777777777765443 5666777777777777765
Q ss_pred chhHhhccCCCceeEeeccCcccccCCCccccccCchhhcccCcC
Q 038671 305 FIPSCFEELHGLSYIDISYNELHGSIPNSTAFRDAPMEALQGNKG 349 (707)
Q Consensus 305 ~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (707)
. ..+..+++|+.|++++|++++.+| ...+.......+.+|+.
T Consensus 346 ~--~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~~ 387 (466)
T 1o6v_A 346 V--SSLANLTNINWLSAGHNQISDLTP-LANLTRITQLGLNDQAW 387 (466)
T ss_dssp C--GGGTTCTTCCEEECCSSCCCBCGG-GTTCTTCCEEECCCEEE
T ss_pred c--hhhccCCCCCEEeCCCCccCccch-hhcCCCCCEEeccCCcc
Confidence 4 356667777777777777766655 33444444444444443
No 278
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=6.6e-36 Score=304.64 Aligned_cols=231 Identities=20% Similarity=0.278 Sum_probs=179.1
Q ss_pred hcCCCCC-ceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHH-hcCCCCceeeeeeeeec----C
Q 038671 435 TNDFDDE-HCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTL-TGIRHRNIVKFYGFCSH----A 507 (707)
Q Consensus 435 ~~~~~~~-~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~~~~~~~~----~ 507 (707)
.++|.+. +.||+|+||.||+|. ..+++.||+|++... ..+.+|+..+ +..+||||+++++++.. .
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~ 87 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAGR 87 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc--------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCC
Confidence 4567776 779999999999995 467899999998532 3456788877 55589999999999876 6
Q ss_pred CceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecC---CCCeEEec
Q 038671 508 RHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDL---ENEAHVSD 584 (707)
Q Consensus 508 ~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~---~~~~kl~D 584 (707)
...++||||+++++|.+++.... ...+++..++.++.|++.||+|||+. ||+||||||+||+++. ++.+||+|
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~D 163 (299)
T 3m2w_A 88 KCLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTD 163 (299)
T ss_dssp EEEEEEECCCCSCBHHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECC
T ss_pred ceEEEEEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEec
Confidence 78899999999999999997543 34689999999999999999999999 9999999999999998 78899999
Q ss_pred cccceecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCC
Q 038671 585 FGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDP 664 (707)
Q Consensus 585 fg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 664 (707)
||++.... +..++.++||||||+++|+|++|+.||........ ...........
T Consensus 164 fg~a~~~~----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~----~~~~~~~~~~~ 217 (299)
T 3m2w_A 164 FGFAKETT----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI----SPGMKTRIRMG 217 (299)
T ss_dssp CTTCEECT----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-----------CCSCCSSCTT
T ss_pred cccccccc----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh----hHHHHHHHhhc
Confidence 99986533 23477899999999999999999999964322110 00011111111
Q ss_pred CCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 665 RLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 665 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
....+.......+.++.+++.+||+.||.+|||++|+++
T Consensus 218 ~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 218 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp CCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 121111111234567999999999999999999999986
No 279
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=9.3e-36 Score=337.44 Aligned_cols=236 Identities=25% Similarity=0.355 Sum_probs=191.1
Q ss_pred hcCCCCCceeeecCCeeEEEEEcC--CCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCc---
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAELP--SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARH--- 509 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~--- 509 (707)
.++|++.+.||+|+||.||+|... +|+.||||++.... .......+.+|++++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 156 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG--DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGD 156 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC--CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSC
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC--CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCC
Confidence 478999999999999999999654 68999999986532 23355678999999999999999999999987665
Q ss_pred --eeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEecccc
Q 038671 510 --SFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGT 587 (707)
Q Consensus 510 --~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~ 587 (707)
.|+||||++|++|.+++.. .+++..++.++.||+.||+|||++ ||+||||||+||+++.+ .+||+|||+
T Consensus 157 ~~~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~ 227 (681)
T 2pzi_A 157 PVGYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGA 227 (681)
T ss_dssp EEEEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTT
T ss_pred ceeEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEeccc
Confidence 6999999999999987643 589999999999999999999999 99999999999999875 999999999
Q ss_pred ceecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCC
Q 038671 588 AKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLP 667 (707)
Q Consensus 588 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (707)
++..... ....||+.|+|||++.+. ++.++||||||+++|+|++|..||..... ...+
T Consensus 228 a~~~~~~----~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~-----------------~~~~ 285 (681)
T 2pzi_A 228 VSRINSF----GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYV-----------------DGLP 285 (681)
T ss_dssp CEETTCC----SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEEC-----------------SSCC
T ss_pred chhcccC----CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccc-----------------cccc
Confidence 9876543 345799999999998775 48899999999999999999988752110 0011
Q ss_pred CCCcchHHHHHHHHHHHHhccCCCCCCCCC-HHHHHHH
Q 038671 668 TPSHNVQDKLISIMEVAISCLDESPESRPT-IQKVSQL 704 (707)
Q Consensus 668 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rps-~~~l~~~ 704 (707)
. .......+..+.+++.+||+.||++||+ ++++.+.
T Consensus 286 ~-~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~ 322 (681)
T 2pzi_A 286 E-DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQ 322 (681)
T ss_dssp T-TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHH
T ss_pred c-cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHH
Confidence 1 1112234467899999999999999995 4445443
No 280
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=4.2e-36 Score=319.57 Aligned_cols=244 Identities=14% Similarity=0.136 Sum_probs=180.6
Q ss_pred cCCCCCceeeecCCeeEEEEE-cCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCC-Cceeee-------------
Q 038671 436 NDFDDEHCIGKGGQGSVYKAE-LPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH-RNIVKF------------- 500 (707)
Q Consensus 436 ~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~~------------- 500 (707)
..|...+.||+|+||.||+|. ..+|+.||||++...........+.+.+|+.+++.++| ++....
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 457778899999999999996 66799999999875444443446779999999999977 322111
Q ss_pred --------eeeeec-----CCceeEEEeeeccCcHHHHHhcc----cccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeE
Q 038671 501 --------YGFCSH-----ARHSFIVYEYLEMGSLAMILSND----AAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIV 563 (707)
Q Consensus 501 --------~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~----~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iv 563 (707)
..++.. ....+++|+++ +++|.+++... .....+++..++.++.||++||+|||++ ||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 111111 12356667654 68999888421 1234578889999999999999999999 999
Q ss_pred ecCCCCCCeeecCCCCeEEeccccceecCCCCCCccccccccCCCCcccc----------ccCCCCccchhHHHHHHHHH
Q 038671 564 HRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELA----------YTMKVTEKCDVYSFGVLALE 633 (707)
Q Consensus 564 H~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~----------~~~~~~~~~Dv~slG~~l~e 633 (707)
||||||+||+++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++||||||+++||
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~e 309 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYW 309 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc---cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHH
Confidence 9999999999999999999999999865432 344567 999999998 55568889999999999999
Q ss_pred HHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 038671 634 VIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCLDESPESRPTIQKVSQ 703 (707)
Q Consensus 634 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rps~~~l~~ 703 (707)
|++|+.||....... ......... . ..+.++.+++.+||+.||++||++.++++
T Consensus 310 lltg~~Pf~~~~~~~--------~~~~~~~~~-~-------~~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 310 IWCADLPNTDDAALG--------GSEWIFRSC-K-------NIPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHSSCCCCTTGGGS--------CSGGGGSSC-C-------CCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHCCCCCCCcchhh--------hHHHHHhhc-c-------cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 999999996432211 111111111 1 11245899999999999999999988765
No 281
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.6e-34 Score=311.70 Aligned_cols=306 Identities=28% Similarity=0.417 Sum_probs=267.2
Q ss_pred CCCCceeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeee
Q 038671 2 LSNLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLT 81 (707)
Q Consensus 2 l~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 81 (707)
+++|++|+|++|.+++..+ ++.+++|++|++++|.+++..+ +.++++|++|++++|.+++..+ +..+++|++|+
T Consensus 67 l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~ 140 (466)
T 1o6v_A 67 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLE 140 (466)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEE
T ss_pred hcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEE
Confidence 6789999999999996544 8999999999999999985544 8999999999999999986533 88999999999
Q ss_pred cccccccccCC--------------------CCCCCCCccEEEeccCccccccCccccCCCCCcEEEcccccccccCCCC
Q 038671 82 LENNQLRGPIP--------------------NLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSD 141 (707)
Q Consensus 82 l~~n~i~~~~~--------------------~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~ 141 (707)
+++|.+..++. .+..+++|+.|++++|.++.+ ..+..+++|++|++++|.+++..+
T Consensus 141 l~~n~l~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~-- 216 (466)
T 1o6v_A 141 LSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP-- 216 (466)
T ss_dssp EEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--
T ss_pred CCCCccCCChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--
Confidence 99998876432 256778899999999999876 358899999999999999987654
Q ss_pred CCCCCCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCccc
Q 038671 142 WGRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLE 221 (707)
Q Consensus 142 ~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 221 (707)
+..+++|++|++++|.+++. ..+..+++|+.|++++|.+++..+ +..+++|++|++++|.+++..+ +..+++|+
T Consensus 217 ~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~ 290 (466)
T 1o6v_A 217 LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALT 290 (466)
T ss_dssp GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCS
T ss_pred ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccC
Confidence 77899999999999999854 468889999999999999985544 8899999999999999996544 88999999
Q ss_pred EEEccCCccCCCCCccccCcccCceEeeecccccccCchhhhhcccCCeeeecCccCCCCCCcccccccccceEeccccc
Q 038671 222 RLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNN 301 (707)
Q Consensus 222 ~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~ 301 (707)
.|++++|.+++..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|.+++. ..+..+++|+.|++++|+
T Consensus 291 ~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~ 364 (466)
T 1o6v_A 291 NLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQ 364 (466)
T ss_dssp EEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSC
T ss_pred eEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCc
Confidence 99999999997655 8899999999999999987765 78999999999999999765 578899999999999999
Q ss_pred cCCchhHhhccCCCceeEeeccCcccccCC
Q 038671 302 LSGFIPSCFEELHGLSYIDISYNELHGSIP 331 (707)
Q Consensus 302 i~~~~~~~~~~~~~L~~l~l~~n~~~~~~~ 331 (707)
+++..| +..+++|+.|++++|+|++.+.
T Consensus 365 l~~~~~--~~~l~~L~~L~l~~n~~~~~p~ 392 (466)
T 1o6v_A 365 ISDLTP--LANLTRITQLGLNDQAWTNAPV 392 (466)
T ss_dssp CCBCGG--GTTCTTCCEEECCCEEEECCCB
T ss_pred cCccch--hhcCCCCCEEeccCCcccCCch
Confidence 998877 8899999999999999998643
No 282
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=7.2e-34 Score=293.91 Aligned_cols=288 Identities=22% Similarity=0.256 Sum_probs=162.3
Q ss_pred CCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeeccccccccc-CCCCCCCCCccEEEec
Q 038671 28 SLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRGP-IPNLRNLTSLVRVRLN 106 (707)
Q Consensus 28 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~-~~~l~~l~~L~~L~l~ 106 (707)
+++.++++++.++ .+|..+. +.|++|+|++|.|++..+..|+++++|++|++++|.++.+ +..+..+++|++|+++
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 4455555555554 3333322 3455555555555544444455555555555555555444 2234555555555555
Q ss_pred cCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccCC--CCchhhhCCCCCCEEeCCCCCCCC
Q 038671 107 QNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITG--SMPAEIIHSSQLKVLDLSSNHIVG 184 (707)
Q Consensus 107 ~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~--~~~~~~~~~~~L~~L~l~~n~l~~ 184 (707)
+|+++.++...+ ++|++|++++|.++.+.+..|..+++|++|++++|.++. ..+..+.++++|+.|++++|.++
T Consensus 109 ~n~l~~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~- 184 (330)
T 1xku_A 109 KNQLKELPEKMP---KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT- 184 (330)
T ss_dssp SSCCSBCCSSCC---TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-
T ss_pred CCcCCccChhhc---ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-
Confidence 555554433222 455555555555555444445555555555555555542 34445555666666666666655
Q ss_pred CCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccccCcccCceEeeecccccccCchhhhh
Q 038671 185 EMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPVELEK 264 (707)
Q Consensus 185 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~ 264 (707)
.+|..+. ++|++|++++|.+++..+..+..+++|++|+|++|.+++..+..+..+++|++|++++|+++ ..|..+..
T Consensus 185 ~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 261 (330)
T 1xku_A 185 TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLAD 261 (330)
T ss_dssp SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTT
T ss_pred cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhcc
Confidence 2333222 56666666666666555666666666666666666666555556666666666666666665 44555666
Q ss_pred cccCCeeeecCccCCCCCCccccc------ccccceEeccccccCC--chhHhhccCCCceeEeeccCc
Q 038671 265 LIHLSELDLSHNFLGEEMPSQICN------MQSLEKLNLSHNNLSG--FIPSCFEELHGLSYIDISYNE 325 (707)
Q Consensus 265 l~~L~~L~l~~n~l~~~~~~~~~~------~~~L~~L~l~~n~i~~--~~~~~~~~~~~L~~l~l~~n~ 325 (707)
+++|++|++++|.+++..+..|.. .+.|+.|++++|++.. ..|..|..+.+++.+++++|+
T Consensus 262 l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 262 HKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred CCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 666777777777766655555543 3567778888887763 455677778888888888774
No 283
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=5.4e-34 Score=295.02 Aligned_cols=287 Identities=21% Similarity=0.265 Sum_probs=193.0
Q ss_pred CCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeecccccccccCC-CCCCCCCccEEEec
Q 038671 28 SLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRGPIP-NLRNLTSLVRVRLN 106 (707)
Q Consensus 28 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~-~l~~l~~L~~L~l~ 106 (707)
+++.++++++.++ .+|..+ .++|++|+|++|.|++..+..|+++++|++|++++|.++.+.+ .+.++++|++|+++
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEI--SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCC--CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCC--CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 5666666666666 445444 2466666666666665556666666666666666666665533 46666666666666
Q ss_pred cCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccCC--CCchhhhCCCCCCEEeCCCCCCCC
Q 038671 107 QNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITG--SMPAEIIHSSQLKVLDLSSNHIVG 184 (707)
Q Consensus 107 ~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~--~~~~~~~~~~~L~~L~l~~n~l~~ 184 (707)
+|+++.++...+ ++|++|++++|.++.+.+..|..+++|++|++++|.++. ..+..+..+ +|+.|++++|.+++
T Consensus 111 ~n~l~~l~~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 111 KNHLVEIPPNLP---SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 186 (332)
T ss_dssp SSCCCSCCSSCC---TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS
T ss_pred CCcCCccCcccc---ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc
Confidence 666665544333 566666777666666655566666777777777776642 445555555 77777777777763
Q ss_pred CCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccccCcccCceEeeecccccccCchhhhh
Q 038671 185 EMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPVELEK 264 (707)
Q Consensus 185 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~ 264 (707)
+|..+. ++|++|++++|.+++..+..+..+++|++|+|++|.+++..+..|..+++|+.|++++|+++ ..|..+..
T Consensus 187 -l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 262 (332)
T 2ft3_A 187 -IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPD 262 (332)
T ss_dssp -CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGG
T ss_pred -cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhc
Confidence 443333 57777777777777666677777788888888888887777777777788888888888776 45556777
Q ss_pred cccCCeeeecCccCCCCCCccccc------ccccceEeccccccC--CchhHhhccCCCceeEeeccCc
Q 038671 265 LIHLSELDLSHNFLGEEMPSQICN------MQSLEKLNLSHNNLS--GFIPSCFEELHGLSYIDISYNE 325 (707)
Q Consensus 265 l~~L~~L~l~~n~l~~~~~~~~~~------~~~L~~L~l~~n~i~--~~~~~~~~~~~~L~~l~l~~n~ 325 (707)
+++|+.|++++|.+++..+..|.. ...|+.|++++|++. +..+..+..+++|+.+++++|+
T Consensus 263 l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 263 LKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred CccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 788888888888887666666654 356788888888887 5667778888888888888874
No 284
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=4.3e-36 Score=311.48 Aligned_cols=245 Identities=16% Similarity=0.143 Sum_probs=184.6
Q ss_pred hcCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCc-----hhhhHHHHHHHHHHHhcCC---------CCceeee
Q 038671 435 TNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPS-----EMASQQEFLNEVKTLTGIR---------HRNIVKF 500 (707)
Q Consensus 435 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~---------h~niv~~ 500 (707)
.++|++.+.||+|+||.||+|+. +|+.||||++...... .....+.+.+|+.+++.++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35689999999999999999987 6899999999754321 1223466788888888775 5555555
Q ss_pred e-----------------eeeec-------------CCceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHH
Q 038671 501 Y-----------------GFCSH-------------ARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDA 550 (707)
Q Consensus 501 ~-----------------~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~ 550 (707)
. +++.+ .+..++||||+++|++.+.+.. +.+++..++.++.||+.|
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTAS 173 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHH
Confidence 4 44443 6789999999999976665532 458999999999999999
Q ss_pred HHHHH-hCCCCCeEecCCCCCCeeecCCC--------------------CeEEeccccceecCCCCCCccccccccCCCC
Q 038671 551 LSYMH-NDCFPPIVHRDISSKNVLLDLEN--------------------EAHVSDFGTAKFLKPDSSNWAELAGTYGYVA 609 (707)
Q Consensus 551 l~~LH-~~~~~~ivH~dlk~~Nil~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~a 609 (707)
|+||| +. ||+||||||+|||++.++ .+||+|||+|+..... ...||+.|+|
T Consensus 174 L~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-----~~~gt~~y~a 245 (336)
T 2vuw_A 174 LAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-----IVVFCDVSMD 245 (336)
T ss_dssp HHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----EEECCCCTTC
T ss_pred HHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----cEEEeecccC
Confidence 99999 88 999999999999999887 8999999999876532 3479999999
Q ss_pred ccccccCCCCccchhHHHHHH-HHHHHhCCCCCCcccccccccchhhhhhhhhcCCCCCCCCcchHHHHHHHHHHHHhcc
Q 038671 610 PELAYTMKVTEKCDVYSFGVL-ALEVIKGKHPRDFISSISSSSSNLEIALNEMLDPRLPTPSHNVQDKLISIMEVAISCL 688 (707)
Q Consensus 610 PE~~~~~~~~~~~Dv~slG~~-l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 688 (707)
||++.+.. +.++||||+|++ .+++++|..||....+. ............. ............+.++.+++.+||
T Consensus 246 PE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~dli~~~L 320 (336)
T 2vuw_A 246 EDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWL---HYLTDKMLKQMTF-KTKCNTPAMKQIKRKIQEFHRTML 320 (336)
T ss_dssp SGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHH---HHHHHHHHHTCCC-SSCCCSHHHHHHHHHHHHHHHHGG
T ss_pred hhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhh---hHHHHhhhhhhcc-CcccchhhhhhcCHHHHHHHHHHh
Confidence 99998775 899999998777 77888899997421100 0011111111111 111222334567888999999999
Q ss_pred CCCCCCCCCHHHHH
Q 038671 689 DESPESRPTIQKVS 702 (707)
Q Consensus 689 ~~~P~~Rps~~~l~ 702 (707)
+.| |++|++
T Consensus 321 ~~d-----sa~e~l 329 (336)
T 2vuw_A 321 NFS-----SATDLL 329 (336)
T ss_dssp GSS-----SHHHHH
T ss_pred ccC-----CHHHHH
Confidence 976 999988
No 285
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=5e-34 Score=302.41 Aligned_cols=311 Identities=20% Similarity=0.178 Sum_probs=274.0
Q ss_pred CCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeecccccccccCCC-CCCCCCccEE
Q 038671 25 RLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRGPIPN-LRNLTSLVRV 103 (707)
Q Consensus 25 ~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~-l~~l~~L~~L 103 (707)
.+++++.|++++|.++...+..|.++++|++|+|++|.+++..+..|+.+++|++|++++|.+..+++. +.++++|++|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 468999999999999966555689999999999999999988888999999999999999999988765 8999999999
Q ss_pred EeccCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCC
Q 038671 104 RLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIV 183 (707)
Q Consensus 104 ~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~ 183 (707)
++++|+++.++...|..+++|++|++++|.++.+.+..|..+++|++|++++|.+++. .+..+++|+.|++++|.++
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~ 199 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLS 199 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCS
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccc
Confidence 9999999999888899999999999999999999888999999999999999999865 3566899999999999987
Q ss_pred CCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccccCcccCceEeeecccccccCchhhh
Q 038671 184 GEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPVELE 263 (707)
Q Consensus 184 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~ 263 (707)
+ +...++|++|++++|.++.. +. ...++|+.|++++|.+++. ..+..+++|++|++++|.+.+..+..+.
T Consensus 200 ~-----~~~~~~L~~L~l~~n~l~~~-~~--~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~ 269 (390)
T 3o6n_A 200 T-----LAIPIAVEELDASHNSINVV-RG--PVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFV 269 (390)
T ss_dssp E-----EECCSSCSEEECCSSCCCEE-EC--CCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGT
T ss_pred c-----cCCCCcceEEECCCCeeeec-cc--cccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHcc
Confidence 3 34456899999999999854 33 2358999999999999864 5789999999999999999998899999
Q ss_pred hcccCCeeeecCccCCCCCCcccccccccceEeccccccCCchhHhhccCCCceeEeeccCcccccCCCccccccCchhh
Q 038671 264 KLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDISYNELHGSIPNSTAFRDAPMEA 343 (707)
Q Consensus 264 ~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~~~~~~~~ 343 (707)
.+++|+.|++++|.+++ .+..+..+++|+.|++++|++.+ +|..+..+++|+.|++++|+++... ...+.......
T Consensus 270 ~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~N~i~~~~--~~~~~~L~~L~ 345 (390)
T 3o6n_A 270 KMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTLK--LSTHHTLKNLT 345 (390)
T ss_dssp TCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCCC--CCTTCCCSEEE
T ss_pred ccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCccee-cCccccccCcCCEEECCCCccceeC--chhhccCCEEE
Confidence 99999999999999965 45566789999999999999985 4666888999999999999998764 34556677778
Q ss_pred cccCcCcCC
Q 038671 344 LQGNKGLCG 352 (707)
Q Consensus 344 ~~~~~~~c~ 352 (707)
+.+|+..|.
T Consensus 346 l~~N~~~~~ 354 (390)
T 3o6n_A 346 LSHNDWDCN 354 (390)
T ss_dssp CCSSCEEHH
T ss_pred cCCCCccch
Confidence 888887763
No 286
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.5e-33 Score=293.93 Aligned_cols=306 Identities=25% Similarity=0.360 Sum_probs=265.3
Q ss_pred cccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeecccccccccCCCCCCCCCcc
Q 038671 22 EIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRGPIPNLRNLTSLV 101 (707)
Q Consensus 22 ~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~l~~l~~L~ 101 (707)
.+..+++|++|++++|.++ .++ .+..+++|++|++++|.+++..+ +..+++|++|++++|.+..+ +.+..+++|+
T Consensus 39 ~~~~l~~L~~L~l~~~~i~-~~~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~-~~~~~l~~L~ 113 (347)
T 4fmz_A 39 TQEELESITKLVVAGEKVA-SIQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI-SALQNLTNLR 113 (347)
T ss_dssp CHHHHTTCSEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-GGGTTCTTCS
T ss_pred cchhcccccEEEEeCCccc-cch-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc-hHHcCCCcCC
Confidence 3567899999999999999 444 48999999999999999996544 99999999999999999975 4699999999
Q ss_pred EEEeccCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCC
Q 038671 102 RVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNH 181 (707)
Q Consensus 102 ~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~ 181 (707)
+|++++|+++.+.. +..+++|++|++++|...... ..+..+++|++|++++|.+.+..+ +..+++|+.|++++|.
T Consensus 114 ~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~-~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~ 188 (347)
T 4fmz_A 114 ELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDL-SPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQ 188 (347)
T ss_dssp EEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCC-GGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSC
T ss_pred EEECcCCcccCchh--hccCCceeEEECCCCCCcccc-cchhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCc
Confidence 99999999997755 889999999999999665433 348999999999999999985544 8899999999999999
Q ss_pred CCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccccCcccCceEeeecccccccCchh
Q 038671 182 IVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPVE 261 (707)
Q Consensus 182 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~ 261 (707)
+.+..+ +..+++|+.|++++|.+++..+ +..+++|++|++++|.+++..+ +..+++|++|++++|.+++. ..
T Consensus 189 l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~ 260 (347)
T 4fmz_A 189 IEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NA 260 (347)
T ss_dssp CCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GG
T ss_pred cccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hh
Confidence 984433 8899999999999999996544 8899999999999999996655 88999999999999999765 56
Q ss_pred hhhcccCCeeeecCccCCCCCCcccccccccceEeccccccCCchhHhhccCCCceeEeeccCcccccCCCccccccCch
Q 038671 262 LEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDISYNELHGSIPNSTAFRDAPM 341 (707)
Q Consensus 262 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~~~~~~ 341 (707)
+..+++|+.|++++|.+++. ..+..+++|+.|++++|++++..+..+..+++|+.|++++|++++.+| ...++....
T Consensus 261 ~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~ 337 (347)
T 4fmz_A 261 VKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP-LASLSKMDS 337 (347)
T ss_dssp GTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG-GGGCTTCSE
T ss_pred HhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC-hhhhhccce
Confidence 88999999999999999764 568899999999999999999999999999999999999999998876 445555555
Q ss_pred hhcccCc
Q 038671 342 EALQGNK 348 (707)
Q Consensus 342 ~~~~~~~ 348 (707)
..+.+|+
T Consensus 338 L~l~~N~ 344 (347)
T 4fmz_A 338 ADFANQV 344 (347)
T ss_dssp ESSSCC-
T ss_pred eehhhhc
Confidence 5555554
No 287
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=4.3e-33 Score=299.48 Aligned_cols=299 Identities=24% Similarity=0.239 Sum_probs=255.1
Q ss_pred CCCCceeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeee
Q 038671 2 LSNLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLT 81 (707)
Q Consensus 2 l~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 81 (707)
+++|++|++++|.+++. | .|+.+++|++|+|++|++++. + +.++++|++|++++|.+++. + ++++++|++|+
T Consensus 41 l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~ 112 (457)
T 3bz5_A 41 LATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLN 112 (457)
T ss_dssp HTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEE
T ss_pred cCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEE
Confidence 67899999999999964 5 699999999999999999964 4 89999999999999999965 3 89999999999
Q ss_pred cccccccccCCCCCCCCCccEEEeccCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccCCC
Q 038671 82 LENNQLRGPIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGS 161 (707)
Q Consensus 82 l~~n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~ 161 (707)
+++|.++.++ +..+++|++|++++|+++++ .++.+++|++|++++|...+.. .+..+++|++|++++|.+++.
T Consensus 113 L~~N~l~~l~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l 185 (457)
T 3bz5_A 113 CDTNKLTKLD--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITEL 185 (457)
T ss_dssp CCSSCCSCCC--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCC
T ss_pred CCCCcCCeec--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCcccee
Confidence 9999999863 89999999999999999986 3788999999999999543332 588999999999999999964
Q ss_pred CchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccccCc
Q 038671 162 MPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNL 241 (707)
Q Consensus 162 ~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l 241 (707)
+ +..+++|+.|++++|.+++. .+..+++|++|++++|++++ .| +..+++|++|++++|.+++..+..+.++
T Consensus 186 -~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L 256 (457)
T 3bz5_A 186 -D--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKL 256 (457)
T ss_dssp -C--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTC
T ss_pred -c--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCC
Confidence 3 78899999999999999865 38889999999999999996 44 8899999999999999998766555555
Q ss_pred c-------cCceEeeecccccccCchhhhhcccCCeeeecCccCCCCCCc--------ccccccccceEeccccccCCch
Q 038671 242 V-------KLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPS--------QICNMQSLEKLNLSHNNLSGFI 306 (707)
Q Consensus 242 ~-------~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~--------~~~~~~~L~~L~l~~n~i~~~~ 306 (707)
. +|+.|++++|.+.+..| +..+++|+.|++++|...+..|. .+..+++|+.|++++|++++.
T Consensus 257 ~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l- 333 (457)
T 3bz5_A 257 TTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTEL- 333 (457)
T ss_dssp CEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCC-
T ss_pred CEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCccccc-
Confidence 4 55666777776555444 56789999999999986554432 356678999999999999985
Q ss_pred hHhhccCCCceeEeeccCccccc
Q 038671 307 PSCFEELHGLSYIDISYNELHGS 329 (707)
Q Consensus 307 ~~~~~~~~~L~~l~l~~n~~~~~ 329 (707)
.+..+++|+.|++++|++++.
T Consensus 334 --~l~~l~~L~~L~l~~N~l~~l 354 (457)
T 3bz5_A 334 --DVSHNTKLKSLSCVNAHIQDF 354 (457)
T ss_dssp --CCTTCTTCSEEECCSSCCCBC
T ss_pred --ccccCCcCcEEECCCCCCCCc
Confidence 388899999999999999973
No 288
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=3.7e-33 Score=316.10 Aligned_cols=342 Identities=23% Similarity=0.229 Sum_probs=276.3
Q ss_pred eeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeeccccc
Q 038671 7 FLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQ 86 (707)
Q Consensus 7 ~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~ 86 (707)
..+-++.+++ .+|..+. +++++|+|++|+|+.+.+.+|.++++|++|+|++|+|+++.+++|+++++|++|+|++|+
T Consensus 35 ~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~ 111 (635)
T 4g8a_A 35 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 111 (635)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred EEECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCc
Confidence 4567777888 7887765 489999999999998888899999999999999999998889999999999999999999
Q ss_pred ccccCCC-CCCCCCccEEEeccCccccccCccccCCCCCcEEEccccccccc-CCCCCCCCCCCcEEEcCCCccCCCCch
Q 038671 87 LRGPIPN-LRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGE-ISSDWGRCPKLGTLDFSSNNITGSMPA 164 (707)
Q Consensus 87 i~~~~~~-l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~-~~~~~~~~~~L~~L~L~~n~i~~~~~~ 164 (707)
|+.+++. |.++++|++|+|++|+++.+++..|+.+++|++|+|++|.++.+ .+..+..+++|++|+|++|.+++..+.
T Consensus 112 l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 191 (635)
T 4g8a_A 112 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 191 (635)
T ss_dssp CCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGG
T ss_pred CCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccc
Confidence 9988764 89999999999999999999999999999999999999999865 467788999999999999988754433
Q ss_pred hhhCC---------------------------------------------------------------------------
Q 038671 165 EIIHS--------------------------------------------------------------------------- 169 (707)
Q Consensus 165 ~~~~~--------------------------------------------------------------------------- 169 (707)
.+..+
T Consensus 192 ~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~ 271 (635)
T 4g8a_A 192 DLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFD 271 (635)
T ss_dssp GGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCC
T ss_pred cccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhcccccccccchhhcCCccccccccccccccccccccccc
Confidence 33211
Q ss_pred --------------------------------------------------------CCCCEEeCCCCCCCCCCCh-----
Q 038671 170 --------------------------------------------------------SQLKVLDLSSNHIVGEMPS----- 188 (707)
Q Consensus 170 --------------------------------------------------------~~L~~L~l~~n~l~~~~~~----- 188 (707)
..|+.|++.+|.+....+.
T Consensus 272 ~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L 351 (635)
T 4g8a_A 272 KSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSL 351 (635)
T ss_dssp TTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTC
T ss_pred ccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhh
Confidence 1233333333333211111
Q ss_pred --------------hhhCCCCCcEEEecCCccccC---------------------------------------------
Q 038671 189 --------------KLGKLSSLIKLILNSNQLCGQ--------------------------------------------- 209 (707)
Q Consensus 189 --------------~~~~l~~L~~L~l~~n~l~~~--------------------------------------------- 209 (707)
....+++|+.|+++.|.+...
T Consensus 352 ~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~ 431 (635)
T 4g8a_A 352 KRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSN 431 (635)
T ss_dssp CEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSE
T ss_pred hhcccccccCCCCcccccccccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhcc
Confidence 112356677777777766311
Q ss_pred -----CccccCCCCcccEEEccCCccCCCCCccccCcccCceEeeeccccc-ccCchhhhhcccCCeeeecCccCCCCCC
Q 038671 210 -----LSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFI-KKIPVELEKLIHLSELDLSHNFLGEEMP 283 (707)
Q Consensus 210 -----~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 283 (707)
....+..+++++.++++.|.+....+..+..+++|+.|++++|.+. ...+..|..+++|+.|+|++|.+++..|
T Consensus 432 ~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~ 511 (635)
T 4g8a_A 432 LKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSP 511 (635)
T ss_dssp EESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECT
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcCh
Confidence 1123455677777888888887777888888999999999999754 4567789999999999999999999999
Q ss_pred cccccccccceEeccccccCCchhHhhccCCCceeEeeccCcccccCCCccc-c-ccCchhhcccCcCcC
Q 038671 284 SQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDISYNELHGSIPNSTA-F-RDAPMEALQGNKGLC 351 (707)
Q Consensus 284 ~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~-~-~~~~~~~~~~~~~~c 351 (707)
..|.++++|+.|+|++|+|++..+..|..+++|+.|++++|++++.+|.... + .......+.+||+.|
T Consensus 512 ~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C 581 (635)
T 4g8a_A 512 TAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 581 (635)
T ss_dssp TTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCC
T ss_pred HHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcc
Confidence 9999999999999999999998889999999999999999999998876432 2 346667888999887
No 289
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=5.1e-33 Score=287.54 Aligned_cols=289 Identities=22% Similarity=0.269 Sum_probs=233.7
Q ss_pred CCceeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeecc
Q 038671 4 NLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLE 83 (707)
Q Consensus 4 ~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~ 83 (707)
+++.++++++.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.+++..|..|+++++|++|+++
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 5788888888888 6676654 588889999998887777788888999999999998888878888888899999999
Q ss_pred cccccccCCCCCCCCCccEEEeccCccccccCccccCCCCCcEEEcccccccc--cCCCCCCCCCCCcEEEcCCCccCCC
Q 038671 84 NNQLRGPIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYG--EISSDWGRCPKLGTLDFSSNNITGS 161 (707)
Q Consensus 84 ~n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~--~~~~~~~~~~~L~~L~L~~n~i~~~ 161 (707)
+|.++.++..+. ++|++|++++|+++.+.+..|..+++|++|++++|.++. ..+..|..+++|++|++++|.++..
T Consensus 109 ~n~l~~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l 186 (330)
T 1xku_A 109 KNQLKELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTI 186 (330)
T ss_dssp SSCCSBCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSC
T ss_pred CCcCCccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccC
Confidence 988887766554 788899999998888888888888899999999988864 6667788888899999998888843
Q ss_pred CchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccccCc
Q 038671 162 MPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNL 241 (707)
Q Consensus 162 ~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l 241 (707)
+..+. ++|+.|++++|.+++..+..|..+++|++|++++|.+++..+..+..+++|++|+|++|.++ .+|..+..+
T Consensus 187 -~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l 262 (330)
T 1xku_A 187 -PQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADH 262 (330)
T ss_dssp -CSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTC
T ss_pred -Ccccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccC
Confidence 33332 78889999999888777888888888999999999888777778888888999999999888 667778888
Q ss_pred ccCceEeeecccccccCchhhhh------cccCCeeeecCccCCC--CCCcccccccccceEeccccc
Q 038671 242 VKLHYLNLSNNQFIKKIPVELEK------LIHLSELDLSHNFLGE--EMPSQICNMQSLEKLNLSHNN 301 (707)
Q Consensus 242 ~~L~~L~l~~n~l~~~~~~~~~~------l~~L~~L~l~~n~l~~--~~~~~~~~~~~L~~L~l~~n~ 301 (707)
++|++|++++|++++..+..|.. ...|+.|++++|.+.. ..|..|..+.+++.+++++|+
T Consensus 263 ~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 263 KYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp SSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred CCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 88999999999888777766643 3678888898888854 556778888888888888884
No 290
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2.6e-33 Score=289.84 Aligned_cols=288 Identities=24% Similarity=0.287 Sum_probs=226.1
Q ss_pred CCceeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeecc
Q 038671 4 NLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLE 83 (707)
Q Consensus 4 ~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~ 83 (707)
+++.++++++.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.+++..|..|+++++|++|+++
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 4778888888888 6676654 588888888888887777788888888888888888887778888888888888888
Q ss_pred cccccccCCCCCCCCCccEEEeccCccccccCccccCCCCCcEEEcccccccc--cCCCCCCCCCCCcEEEcCCCccCCC
Q 038671 84 NNQLRGPIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYG--EISSDWGRCPKLGTLDFSSNNITGS 161 (707)
Q Consensus 84 ~n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~--~~~~~~~~~~~L~~L~L~~n~i~~~ 161 (707)
+|.+..++..+. ++|++|++++|+++.+++..|..+++|++|++++|.++. ..+..+..+ +|++|++++|.+++.
T Consensus 111 ~n~l~~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l 187 (332)
T 2ft3_A 111 KNHLVEIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGI 187 (332)
T ss_dssp SSCCCSCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSC
T ss_pred CCcCCccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCcc
Confidence 888887766554 788888888888888877778888888888888888863 566677777 888888888888753
Q ss_pred CchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccccCc
Q 038671 162 MPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNL 241 (707)
Q Consensus 162 ~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l 241 (707)
+..+. ++|+.|++++|.+++..+..|..+++|++|++++|.+++..+..+..+++|++|+|++|.++ .+|..+..+
T Consensus 188 -~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l 263 (332)
T 2ft3_A 188 -PKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDL 263 (332)
T ss_dssp -CSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGC
T ss_pred -Ccccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcC
Confidence 33332 67888888888888777778888888888888888888777777888888888888888888 566678888
Q ss_pred ccCceEeeecccccccCchhhhhc------ccCCeeeecCccCC--CCCCcccccccccceEeccccc
Q 038671 242 VKLHYLNLSNNQFIKKIPVELEKL------IHLSELDLSHNFLG--EEMPSQICNMQSLEKLNLSHNN 301 (707)
Q Consensus 242 ~~L~~L~l~~n~l~~~~~~~~~~l------~~L~~L~l~~n~l~--~~~~~~~~~~~~L~~L~l~~n~ 301 (707)
++|+.|++++|++++..+..|... .+|+.|++++|++. +..+..|..+++|+.+++++|+
T Consensus 264 ~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 264 KLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp TTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 888888888888887776666543 56788888888876 4667778888888888888874
No 291
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=3.4e-33 Score=312.19 Aligned_cols=311 Identities=20% Similarity=0.174 Sum_probs=275.4
Q ss_pred CCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeecccccccccCCC-CCCCCCccEE
Q 038671 25 RLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRGPIPN-LRNLTSLVRV 103 (707)
Q Consensus 25 ~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~-l~~l~~L~~L 103 (707)
.+.+++.|++++|.++...+..|.++++|++|+|++|.|++..|..|+.+++|++|+|++|.++.+++. |.++++|++|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 357899999999999976666789999999999999999999889999999999999999999988775 7999999999
Q ss_pred EeccCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCC
Q 038671 104 RLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIV 183 (707)
Q Consensus 104 ~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~ 183 (707)
+|++|.++.+++..|..+++|++|+|++|.++.+.+..|..+++|++|+|++|.+++.. +..+++|+.|++++|.++
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~ 205 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLS 205 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCS
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccc
Confidence 99999999999888999999999999999999999999999999999999999998653 556889999999999987
Q ss_pred CCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccccCcccCceEeeecccccccCchhhh
Q 038671 184 GEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPVELE 263 (707)
Q Consensus 184 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~ 263 (707)
+ +...++|++|++++|.++...+. ..++|+.|+|++|.+++. ..+..+++|+.|+|++|.+.+..|..|.
T Consensus 206 ~-----l~~~~~L~~L~ls~n~l~~~~~~---~~~~L~~L~L~~n~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~ 275 (597)
T 3oja_B 206 T-----LAIPIAVEELDASHNSINVVRGP---VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFV 275 (597)
T ss_dssp E-----EECCTTCSEEECCSSCCCEEECS---CCSCCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGT
T ss_pred c-----ccCCchhheeeccCCcccccccc---cCCCCCEEECCCCCCCCC--hhhccCCCCCEEECCCCccCCCCHHHhc
Confidence 3 34557899999999999854332 237899999999999863 6789999999999999999999999999
Q ss_pred hcccCCeeeecCccCCCCCCcccccccccceEeccccccCCchhHhhccCCCceeEeeccCcccccCCCccccccCchhh
Q 038671 264 KLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDISYNELHGSIPNSTAFRDAPMEA 343 (707)
Q Consensus 264 ~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~~~~~~~~~~ 343 (707)
.+++|+.|+|++|.+++ .|..+..+++|+.|++++|+++. +|..+..+++|+.|++++|++++.. ...+.......
T Consensus 276 ~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~~-i~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~L~~L~ 351 (597)
T 3oja_B 276 KMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTLK--LSTHHTLKNLT 351 (597)
T ss_dssp TCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCCC--CCTTCCCSEEE
T ss_pred CccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCCc-cCcccccCCCCCEEECCCCCCCCcC--hhhcCCCCEEE
Confidence 99999999999999976 46667789999999999999994 5777889999999999999998764 34456677778
Q ss_pred cccCcCcCC
Q 038671 344 LQGNKGLCG 352 (707)
Q Consensus 344 ~~~~~~~c~ 352 (707)
+.+|++.|.
T Consensus 352 l~~N~~~~~ 360 (597)
T 3oja_B 352 LSHNDWDCN 360 (597)
T ss_dssp CCSSCEEHH
T ss_pred eeCCCCCCh
Confidence 888887764
No 292
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=4.5e-32 Score=291.55 Aligned_cols=293 Identities=23% Similarity=0.228 Sum_probs=239.4
Q ss_pred CCCCCceeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCee
Q 038671 1 NLSNLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLL 80 (707)
Q Consensus 1 nl~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 80 (707)
++++|++|+|++|++++. | ++.+++|++|++++|++++. + +.++++|++|++++|.+++. + ++.+++|++|
T Consensus 62 ~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L 132 (457)
T 3bz5_A 62 KLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYL 132 (457)
T ss_dssp GCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSCC-C--CTTCTTCCEE
T ss_pred ccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCee-c--CCCCCcCCEE
Confidence 378999999999999964 4 89999999999999999964 3 89999999999999999964 4 8999999999
Q ss_pred ecccccccccCCCCCCCCCccEEEeccCc-cccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccC
Q 038671 81 TLENNQLRGPIPNLRNLTSLVRVRLNQNH-LTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNIT 159 (707)
Q Consensus 81 ~l~~n~i~~~~~~l~~l~~L~~L~l~~n~-l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~ 159 (707)
++++|+++.+ .+..+++|++|++++|+ ++.+ .+..+++|++|++++|.++++. +..+++|+.|++++|.++
T Consensus 133 ~l~~N~l~~l--~l~~l~~L~~L~l~~n~~~~~~---~~~~l~~L~~L~ls~n~l~~l~---l~~l~~L~~L~l~~N~l~ 204 (457)
T 3bz5_A 133 NCARNTLTEI--DVSHNTQLTELDCHLNKKITKL---DVTPQTQLTTLDCSFNKITELD---VSQNKLLNRLNCDTNNIT 204 (457)
T ss_dssp ECTTSCCSCC--CCTTCTTCCEEECTTCSCCCCC---CCTTCTTCCEEECCSSCCCCCC---CTTCTTCCEEECCSSCCS
T ss_pred ECCCCcccee--ccccCCcCCEEECCCCCccccc---ccccCCcCCEEECCCCccceec---cccCCCCCEEECcCCcCC
Confidence 9999999986 48899999999999995 4433 5788999999999999999753 889999999999999999
Q ss_pred CCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCC-------cccEEEccCCccCC
Q 038671 160 GSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLT-------QLERLDLSSNRLSN 232 (707)
Q Consensus 160 ~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-------~L~~L~l~~n~i~~ 232 (707)
+. .+..+++|+.|++++|++++ +| +..+++|+.|++++|++++..+..+..++ +|+.|++++|.+.+
T Consensus 205 ~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~ 278 (457)
T 3bz5_A 205 KL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLI 278 (457)
T ss_dssp CC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCC
T ss_pred ee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCC
Confidence 65 38889999999999999996 55 88999999999999999976544444333 44455555555444
Q ss_pred CCCccccCcccCceEeeecccccccCch--------hhhhcccCCeeeecCccCCCCCCcccccccccceEeccccccCC
Q 038671 233 SIPKSLGNLVKLHYLNLSNNQFIKKIPV--------ELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSG 304 (707)
Q Consensus 233 ~~~~~l~~l~~L~~L~l~~n~l~~~~~~--------~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~ 304 (707)
..| ++.+++|+.|++++|...+..+. .+..+++|+.|++++|.+++. .+..+++|+.|++++|++++
T Consensus 279 ~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l---~l~~l~~L~~L~l~~N~l~~ 353 (457)
T 3bz5_A 279 YFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTEL---DVSHNTKLKSLSCVNAHIQD 353 (457)
T ss_dssp EEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCC---CCTTCTTCSEEECCSSCCCB
T ss_pred ccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCccccc---ccccCCcCcEEECCCCCCCC
Confidence 433 56789999999999986554432 366778999999999999874 38899999999999999986
Q ss_pred chhHhhccCCCceeEeeccCccccc
Q 038671 305 FIPSCFEELHGLSYIDISYNELHGS 329 (707)
Q Consensus 305 ~~~~~~~~~~~L~~l~l~~n~~~~~ 329 (707)
. +.|..|++++|.++|.
T Consensus 354 l--------~~L~~L~l~~n~l~g~ 370 (457)
T 3bz5_A 354 F--------SSVGKIPALNNNFEAE 370 (457)
T ss_dssp C--------TTGGGSSGGGTSEEEE
T ss_pred c--------cccccccccCCcEEec
Confidence 3 3344444444444443
No 293
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.98 E-value=1.8e-32 Score=280.44 Aligned_cols=253 Identities=25% Similarity=0.447 Sum_probs=140.6
Q ss_pred CccEEEeccCcccc--ccCccccCCCCCcEEEccc-ccccccCCCCCCCCCCCcEEEcCCCccCCCCchhhhCCCCCCEE
Q 038671 99 SLVRVRLNQNHLTG--NISESFGIHPNLAFIDLSH-NYFYGEISSDWGRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVL 175 (707)
Q Consensus 99 ~L~~L~l~~n~l~~--~~~~~~~~~~~L~~L~L~~-n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L 175 (707)
+++.|++++|++++ ..+..|..+++|++|+|++ |.+.+..+..|..+++|++|+|++|.+++..+..|..+++|++|
T Consensus 51 ~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 130 (313)
T 1ogq_A 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred eEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEE
Confidence 45555555555544 3444555555555555552 55554445555555555555555555554455555555555555
Q ss_pred eCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCC-cccEEEccCCccCCCCCccccCcccCceEeeecccc
Q 038671 176 DLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLT-QLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQF 254 (707)
Q Consensus 176 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l 254 (707)
++++|.+++..|..+..+++|++|++++|.+++..|..+..++ +|++|++++|.+++..|..+..++ |+.|++++|.+
T Consensus 131 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l 209 (313)
T 1ogq_A 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNML 209 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEE
T ss_pred eCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcc
Confidence 5555555555555555555555555555555555555555554 555555555555555555555554 55555555555
Q ss_pred cccCchhhhhcccCCeeeecCccCCCCCCcccccccccceEeccccccCCchhHhhccCCCceeEeeccCcccccCCCcc
Q 038671 255 IKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDISYNELHGSIPNST 334 (707)
Q Consensus 255 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~ 334 (707)
++..+..+..+++|+.|++++|.+++..+. +..+++|+.|++++|++++..|..+..+++|+.|++++|++++.+|...
T Consensus 210 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~ 288 (313)
T 1ogq_A 210 EGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGG 288 (313)
T ss_dssp EECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCST
T ss_pred cCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCc
Confidence 555555555555566666665555443333 4555566666666666655555556666666666666666666555555
Q ss_pred ccccCchhhcccCcCcCCC
Q 038671 335 AFRDAPMEALQGNKGLCGD 353 (707)
Q Consensus 335 ~~~~~~~~~~~~~~~~c~~ 353 (707)
.++......+.+|+..|+.
T Consensus 289 ~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 289 NLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp TGGGSCGGGTCSSSEEEST
T ss_pred cccccChHHhcCCCCccCC
Confidence 5555555556666666654
No 294
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.98 E-value=1e-32 Score=282.23 Aligned_cols=248 Identities=30% Similarity=0.444 Sum_probs=209.5
Q ss_pred CCCCeEECCCCcccc--ccCcCccCCCCCcEEEccc-CcCcccCCccccCCCCCCeeecccccccc-cCCCCCCCCCccE
Q 038671 27 KSLSDLELSGNKLCG--SIPHSLGNLTQITFLTLFD-NALSGAIPKEYGNLVKLTLLTLENNQLRG-PIPNLRNLTSLVR 102 (707)
Q Consensus 27 ~~L~~L~l~~n~i~~--~~~~~~~~l~~L~~L~L~~-n~i~~~~~~~~~~l~~L~~L~l~~n~i~~-~~~~l~~l~~L~~ 102 (707)
.+++.|+|++|++++ .+|..|.++++|++|+|++ |.+.+.+|..|+++++|++|++++|.+.. ++..+..+++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 478888888888887 7788888888888888884 88887788888888888888888888874 4445888888888
Q ss_pred EEeccCccccccCccccCCCCCcEEEcccccccccCCCCCCCCC-CCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCC
Q 038671 103 VRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCP-KLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNH 181 (707)
Q Consensus 103 L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~-~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~ 181 (707)
|++++|.+++..+..+..+++|++|+|++|.+++..+..+..++ +|++|+|++|.+++..+..+..+. |+.|++++|.
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 88888888877777888888888888888888877788888887 888899988888878888888886 9999999998
Q ss_pred CCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccccCcccCceEeeecccccccCchh
Q 038671 182 IVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPVE 261 (707)
Q Consensus 182 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~ 261 (707)
+++..+..|..+++|++|++++|.+++..+. +..+++|++|+|++|.+++..|..|..+++|++|+|++|++++..|..
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 8888888888899999999999999855554 778899999999999998888889999999999999999998877765
Q ss_pred hhhcccCCeeeecCcc
Q 038671 262 LEKLIHLSELDLSHNF 277 (707)
Q Consensus 262 ~~~l~~L~~L~l~~n~ 277 (707)
..+++|+.|++++|+
T Consensus 288 -~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 288 -GNLQRFDVSAYANNK 302 (313)
T ss_dssp -TTGGGSCGGGTCSSS
T ss_pred -ccccccChHHhcCCC
Confidence 788899999999997
No 295
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=5.7e-31 Score=269.11 Aligned_cols=280 Identities=24% Similarity=0.252 Sum_probs=206.5
Q ss_pred ceeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccC--CccccCCCCCCeeecc
Q 038671 6 AFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAI--PKEYGNLVKLTLLTLE 83 (707)
Q Consensus 6 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~--~~~~~~l~~L~~L~l~ 83 (707)
+.++++++.++ .+|..+. ++|++|+|++|+++...+..|.++++|++|+|++|.++... +..+..+++|++|+++
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 57888888888 6676554 58999999999988555556788999999999999887443 5667778889999999
Q ss_pred cccccccCCCCCCCCCccEEEeccCccccccC-ccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccCC-C
Q 038671 84 NNQLRGPIPNLRNLTSLVRVRLNQNHLTGNIS-ESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITG-S 161 (707)
Q Consensus 84 ~n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~~-~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~-~ 161 (707)
+|.+..++..+..+++|++|++++|+++.+.. ..+..+++|++|++++|.++...+..+..+++|++|+|++|.+++ .
T Consensus 87 ~n~i~~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 166 (306)
T 2z66_A 87 FNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENF 166 (306)
T ss_dssp SCSEEEEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGE
T ss_pred CCccccChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCcccccc
Confidence 98888777778888888888888888887765 567788888888888888887777778888888888888888775 4
Q ss_pred CchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccccCc
Q 038671 162 MPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNL 241 (707)
Q Consensus 162 ~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l 241 (707)
.+..+..+++|+.|++++|.+++..+..+..+++|++|++++|.+++..+..+..+++|++|+|++|.+++..+..+..+
T Consensus 167 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 246 (306)
T 2z66_A 167 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHF 246 (306)
T ss_dssp ECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCC
T ss_pred chhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhh
Confidence 56677777888888888888776667777777778888888887776666667777777777777777777777777776
Q ss_pred c-cCceEeeecccccccCc--hhhhhcccCCeeeecCccCCCCCCccccc
Q 038671 242 V-KLHYLNLSNNQFIKKIP--VELEKLIHLSELDLSHNFLGEEMPSQICN 288 (707)
Q Consensus 242 ~-~L~~L~l~~n~l~~~~~--~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 288 (707)
+ +|++|+|++|++..... .....+...+.+.+..+.+....|..+.+
T Consensus 247 ~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~~g 296 (306)
T 2z66_A 247 PSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQG 296 (306)
T ss_dssp CTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGGGTT
T ss_pred hccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchhhCC
Confidence 4 77777777777754321 11222334444444455554444444433
No 296
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=3e-33 Score=303.82 Aligned_cols=325 Identities=22% Similarity=0.237 Sum_probs=138.7
Q ss_pred CCCceeeccCCeeee----cCCccccCCCCCCeEECCCCccccccCcCc-cCCC----CCcEEEcccCcCcc----cCCc
Q 038671 3 SNLAFLYLYNNSFSG----SIPSEIGRLKSLSDLELSGNKLCGSIPHSL-GNLT----QITFLTLFDNALSG----AIPK 69 (707)
Q Consensus 3 ~~l~~L~l~~n~i~~----~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~-~~l~----~L~~L~L~~n~i~~----~~~~ 69 (707)
++|++|+|++|.+++ .++..+..+++|++|+|++|.+++..+..+ ..++ +|++|+|++|.|++ .++.
T Consensus 28 ~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~ 107 (461)
T 1z7x_W 28 QQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSS 107 (461)
T ss_dssp TTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHH
T ss_pred CCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHH
Confidence 344444444444442 123334444445555555544443222211 1122 34455555554442 1244
Q ss_pred cccCCCCCCeeecccccccccCC-----C-CCCCCCccEEEeccCcccccc----CccccCCCCCcEEEcccccccccCC
Q 038671 70 EYGNLVKLTLLTLENNQLRGPIP-----N-LRNLTSLVRVRLNQNHLTGNI----SESFGIHPNLAFIDLSHNYFYGEIS 139 (707)
Q Consensus 70 ~~~~l~~L~~L~l~~n~i~~~~~-----~-l~~l~~L~~L~l~~n~l~~~~----~~~~~~~~~L~~L~L~~n~i~~~~~ 139 (707)
.|..+++|++|++++|.++.... . ....++|++|++++|+++... +..+..+++|++|++++|.++....
T Consensus 108 ~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~ 187 (461)
T 1z7x_W 108 TLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGV 187 (461)
T ss_dssp HTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHH
T ss_pred HHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHH
Confidence 44444455555555544432100 0 122334455555555444322 2223334455555555554443222
Q ss_pred CCCC-----CCCCCcEEEcCCCccCCC----CchhhhCCCCCCEEeCCCCCCCCCC-----ChhhhCCCCCcEEEecCCc
Q 038671 140 SDWG-----RCPKLGTLDFSSNNITGS----MPAEIIHSSQLKVLDLSSNHIVGEM-----PSKLGKLSSLIKLILNSNQ 205 (707)
Q Consensus 140 ~~~~-----~~~~L~~L~L~~n~i~~~----~~~~~~~~~~L~~L~l~~n~l~~~~-----~~~~~~l~~L~~L~l~~n~ 205 (707)
..+. ..++|++|+|++|.+++. .+..+..+++|+.|++++|.+++.. +..+..+++|++|++++|.
T Consensus 188 ~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~ 267 (461)
T 1z7x_W 188 RVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECG 267 (461)
T ss_dssp HHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSC
T ss_pred HHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCC
Confidence 2221 133455555555554432 2333344455555555555443221 1111134455555555555
Q ss_pred cccC----CccccCCCCcccEEEccCCccCCCCCccccCc-----ccCceEeeecccccccC----chhhhhcccCCeee
Q 038671 206 LCGQ----LSLELGSLTQLERLDLSSNRLSNSIPKSLGNL-----VKLHYLNLSNNQFIKKI----PVELEKLIHLSELD 272 (707)
Q Consensus 206 l~~~----~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l-----~~L~~L~l~~n~l~~~~----~~~~~~l~~L~~L~ 272 (707)
++.. .+..+..+++|++|++++|.+++..+..+... ++|+.|++++|.+++.. +..+..+++|++|+
T Consensus 268 l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~ 347 (461)
T 1z7x_W 268 ITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQ 347 (461)
T ss_dssp CCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEE
T ss_pred CCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEE
Confidence 5432 23333444555555555555443322222221 34555555555544332 22333445555555
Q ss_pred ecCccCCCCCCccccc-----ccccceEeccccccCC----chhHhhccCCCceeEeeccCccc
Q 038671 273 LSHNFLGEEMPSQICN-----MQSLEKLNLSHNNLSG----FIPSCFEELHGLSYIDISYNELH 327 (707)
Q Consensus 273 l~~n~l~~~~~~~~~~-----~~~L~~L~l~~n~i~~----~~~~~~~~~~~L~~l~l~~n~~~ 327 (707)
+++|.+++..+..+.. .++|+.|++++|++++ .++..+..+++|+.|++++|+++
T Consensus 348 Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 348 ISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp CCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred ccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 5555554333322222 3455555555555543 34444445555555555555544
No 297
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.97 E-value=1.7e-29 Score=271.24 Aligned_cols=240 Identities=27% Similarity=0.283 Sum_probs=123.0
Q ss_pred CCCcEEEcccCcCcccCCccccCCCCCCeeecccccccccCCCCCCCCCccEEEeccCccccccCccccCCCCCcEEEcc
Q 038671 51 TQITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRGPIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLS 130 (707)
Q Consensus 51 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~ 130 (707)
++|++|++++|.+++ +| .|+++++|++|++++|+++.++..+ .+|++|++++|++++++ .+..+++|++|+++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~lp~~~---~~L~~L~L~~n~l~~l~--~~~~l~~L~~L~l~ 203 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKKLPDLP---PSLEFIAAGNNQLEELP--ELQNLPFLTAIYAD 203 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSCCCCCC---TTCCEEECCSSCCSSCC--CCTTCTTCCEEECC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcccCCCc---ccccEEECcCCcCCcCc--cccCCCCCCEEECC
Confidence 345555555555553 33 3555555555555555555433221 25555555555555432 34555555555555
Q ss_pred cccccccCCCCCCCCCCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCC
Q 038671 131 HNYFYGEISSDWGRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQL 210 (707)
Q Consensus 131 ~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 210 (707)
+|.++++.. ..++|++|++++|.++ ..+ .+..+++|+.|++++|++++ +|.. +++|++|++++|++++ .
T Consensus 204 ~N~l~~l~~----~~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l 272 (454)
T 1jl5_A 204 NNSLKKLPD----LPLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-L 272 (454)
T ss_dssp SSCCSSCCC----CCTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-C
T ss_pred CCcCCcCCC----CcCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-c
Confidence 555543211 1134555555555554 223 24455555555555555542 2221 2455555555555553 2
Q ss_pred ccccCCCCcccEEEccCCccCCCCCccccCcccCceEeeecccccccCchhhhhc-ccCCeeeecCccCCCCCCcccccc
Q 038671 211 SLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPVELEKL-IHLSELDLSHNFLGEEMPSQICNM 289 (707)
Q Consensus 211 ~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l-~~L~~L~l~~n~l~~~~~~~~~~~ 289 (707)
+.. +++|++|++++|.+++.. . + .++|+.|++++|++++. ..+ ++|+.|++++|.+++ .|.. +
T Consensus 273 ~~~---~~~L~~L~ls~N~l~~l~-~-~--~~~L~~L~l~~N~l~~i-----~~~~~~L~~L~Ls~N~l~~-lp~~---~ 336 (454)
T 1jl5_A 273 PEL---PQSLTFLDVSENIFSGLS-E-L--PPNLYYLNASSNEIRSL-----CDLPPSLEELNVSNNKLIE-LPAL---P 336 (454)
T ss_dssp CCC---CTTCCEEECCSSCCSEES-C-C--CTTCCEEECCSSCCSEE-----CCCCTTCCEEECCSSCCSC-CCCC---C
T ss_pred Ccc---cCcCCEEECcCCccCccc-C-c--CCcCCEEECcCCcCCcc-----cCCcCcCCEEECCCCcccc-cccc---C
Confidence 221 245555555555555311 0 0 13455555555555432 122 467777777777754 3332 4
Q ss_pred cccceEeccccccCCchhHhhccCCCceeEeeccCcccc
Q 038671 290 QSLEKLNLSHNNLSGFIPSCFEELHGLSYIDISYNELHG 328 (707)
Q Consensus 290 ~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~l~~n~~~~ 328 (707)
++|+.|++++|.++.. |. .+++|+.|++++|++++
T Consensus 337 ~~L~~L~L~~N~l~~l-p~---~l~~L~~L~L~~N~l~~ 371 (454)
T 1jl5_A 337 PRLERLIASFNHLAEV-PE---LPQNLKQLHVEYNPLRE 371 (454)
T ss_dssp TTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSS
T ss_pred CcCCEEECCCCccccc-cc---hhhhccEEECCCCCCCc
Confidence 6777777777777743 33 35677777777777777
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=9e-34 Score=307.94 Aligned_cols=327 Identities=20% Similarity=0.139 Sum_probs=265.8
Q ss_pred CCCCceeeccCCeeeecCCcc-ccCCCCCCeEECCCCcccc----ccCcCccCCCCCcEEEcccCcCcccCCcccc-CCC
Q 038671 2 LSNLAFLYLYNNSFSGSIPSE-IGRLKSLSDLELSGNKLCG----SIPHSLGNLTQITFLTLFDNALSGAIPKEYG-NLV 75 (707)
Q Consensus 2 l~~l~~L~l~~n~i~~~~~~~-~~~l~~L~~L~l~~n~i~~----~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~-~l~ 75 (707)
+++|++|+|++|++++..... +..+++|++|+|++|++++ .++..+..+++|++|+|++|.+++..+..+. .++
T Consensus 2 ~~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~ 81 (461)
T 1z7x_W 2 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQ 81 (461)
T ss_dssp CEEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTC
T ss_pred CccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHh
Confidence 467899999999998665444 7889999999999999985 3466788899999999999999875554443 455
Q ss_pred ----CCCeeecccccccc-----cCCCCCCCCCccEEEeccCccccccCcccc-----CCCCCcEEEcccccccccC---
Q 038671 76 ----KLTLLTLENNQLRG-----PIPNLRNLTSLVRVRLNQNHLTGNISESFG-----IHPNLAFIDLSHNYFYGEI--- 138 (707)
Q Consensus 76 ----~L~~L~l~~n~i~~-----~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~-----~~~~L~~L~L~~n~i~~~~--- 138 (707)
+|++|++++|.++. ++..+..+++|++|++++|.++......+. ..++|++|+|++|.++...
T Consensus 82 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~ 161 (461)
T 1z7x_W 82 TPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEP 161 (461)
T ss_dssp STTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHH
T ss_pred hCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHH
Confidence 69999999999984 345689999999999999999865444333 3568999999999998643
Q ss_pred -CCCCCCCCCCcEEEcCCCccCCCCchhhhC-----CCCCCEEeCCCCCCCCC----CChhhhCCCCCcEEEecCCcccc
Q 038671 139 -SSDWGRCPKLGTLDFSSNNITGSMPAEIIH-----SSQLKVLDLSSNHIVGE----MPSKLGKLSSLIKLILNSNQLCG 208 (707)
Q Consensus 139 -~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~-----~~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~ 208 (707)
+..+..+++|++|++++|.+++.....+.. .++|+.|++++|.+++. ++..+..+++|++|++++|.++.
T Consensus 162 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~ 241 (461)
T 1z7x_W 162 LASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGD 241 (461)
T ss_dssp HHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHH
T ss_pred HHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCCh
Confidence 455667899999999999988655554443 67999999999999854 46778889999999999999985
Q ss_pred CC-----ccccCCCCcccEEEccCCccCCC----CCccccCcccCceEeeecccccccCchhhhhc-----ccCCeeeec
Q 038671 209 QL-----SLELGSLTQLERLDLSSNRLSNS----IPKSLGNLVKLHYLNLSNNQFIKKIPVELEKL-----IHLSELDLS 274 (707)
Q Consensus 209 ~~-----~~~~~~l~~L~~L~l~~n~i~~~----~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l-----~~L~~L~l~ 274 (707)
.. +..+..+++|++|++++|.+++. .+..+..+++|++|++++|.+.+..+..+... ++|++|+++
T Consensus 242 ~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~ 321 (461)
T 1z7x_W 242 VGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVK 321 (461)
T ss_dssp HHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECT
T ss_pred HHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcC
Confidence 43 22334689999999999999864 46677789999999999999987766666554 699999999
Q ss_pred CccCCCC----CCcccccccccceEeccccccCCchhHhhcc-----CCCceeEeeccCcccc
Q 038671 275 HNFLGEE----MPSQICNMQSLEKLNLSHNNLSGFIPSCFEE-----LHGLSYIDISYNELHG 328 (707)
Q Consensus 275 ~n~l~~~----~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~-----~~~L~~l~l~~n~~~~ 328 (707)
+|.+++. .+..+..+++|+.|++++|++++..+..+.. .++|+.|++++|+++.
T Consensus 322 ~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~ 384 (461)
T 1z7x_W 322 SCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSD 384 (461)
T ss_dssp TSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCH
T ss_pred CCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCCh
Confidence 9999765 3455667799999999999998776655553 6799999999999984
No 299
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=7.6e-30 Score=274.48 Aligned_cols=252 Identities=25% Similarity=0.268 Sum_probs=163.1
Q ss_pred CCeeecccccccccCCCCCCCCCccEEEeccCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCC
Q 038671 77 LTLLTLENNQLRGPIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSN 156 (707)
Q Consensus 77 L~~L~l~~n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n 156 (707)
...++.+++.++.++..+. ++++.|+|++|+++.+.+..|..+++|++|+|++|.++.+.+..|..+++|++|+|++|
T Consensus 45 ~~~v~c~~~~l~~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 122 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122 (440)
T ss_dssp SCEEECCSCCCSSCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSS
T ss_pred CCEEEeCCCCcCcCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCC
Confidence 3445555555554444433 45555555555555555555556666666666666665555555666666666666666
Q ss_pred ccCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecC-CccccCCccccCCCCcccEEEccCCccCCCCC
Q 038671 157 NITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNS-NQLCGQLSLELGSLTQLERLDLSSNRLSNSIP 235 (707)
Q Consensus 157 ~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~ 235 (707)
.++...+..|..+++|+.|+|++|.++...+..|..+++|++|++++ |.++...+..|..+++|++|+|++|.++.. |
T Consensus 123 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~ 201 (440)
T 3zyj_A 123 RLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI-P 201 (440)
T ss_dssp CCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSC-C
T ss_pred cCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccc-c
Confidence 66655555556666666666666666555555566666666666666 344434444566677777777777777633 3
Q ss_pred ccccCcccCceEeeecccccccCchhhhhcccCCeeeecCccCCCCCCcccccccccceEeccccccCCchhHhhccCCC
Q 038671 236 KSLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHG 315 (707)
Q Consensus 236 ~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~ 315 (707)
.+..+++|+.|+|++|++++..+..|.++++|+.|+|++|.+++..+..|..+++|+.|++++|++++..+..+..+++
T Consensus 202 -~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 280 (440)
T 3zyj_A 202 -NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHH 280 (440)
T ss_dssp -CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTT
T ss_pred -ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccC
Confidence 3666777777777777777777777777777777777777777777777777777777777777777776677777778
Q ss_pred ceeEeeccCcccccCCC
Q 038671 316 LSYIDISYNELHGSIPN 332 (707)
Q Consensus 316 L~~l~l~~n~~~~~~~~ 332 (707)
|+.|++++|+|.|.|..
T Consensus 281 L~~L~L~~Np~~CdC~l 297 (440)
T 3zyj_A 281 LERIHLHHNPWNCNCDI 297 (440)
T ss_dssp CCEEECCSSCEECSSTT
T ss_pred CCEEEcCCCCccCCCCc
Confidence 88888888888877753
No 300
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=1.1e-30 Score=272.51 Aligned_cols=277 Identities=21% Similarity=0.206 Sum_probs=178.0
Q ss_pred CCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeecccccccccCC-CCCCCCCccEEEec
Q 038671 28 SLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRGPIP-NLRNLTSLVRVRLN 106 (707)
Q Consensus 28 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~-~l~~l~~L~~L~l~ 106 (707)
.....++++++++ .+|..+. ++|++|++++|.+++..+..|.++++|++|++++|.++.+.+ .+.++++|++|+++
T Consensus 32 ~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (353)
T 2z80_A 32 RNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLS 108 (353)
T ss_dssp TTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECC
Confidence 3344555555555 4444332 356666666666665555556666666666666666655443 35566666666666
Q ss_pred cCccccccCccccCCCCCcEEEcccccccccCC-CCCCCCCCCcEEEcCCC-ccCCCCchhhhCCCCCCEEeCCCCCCCC
Q 038671 107 QNHLTGNISESFGIHPNLAFIDLSHNYFYGEIS-SDWGRCPKLGTLDFSSN-NITGSMPAEIIHSSQLKVLDLSSNHIVG 184 (707)
Q Consensus 107 ~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~-~~~~~~~~L~~L~L~~n-~i~~~~~~~~~~~~~L~~L~l~~n~l~~ 184 (707)
+|+++.++...|..+++|++|++++|.++.+.. ..|..+++|++|++++| .++...+..+.++++|+.|++++|.+++
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 188 (353)
T 2z80_A 109 YNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQS 188 (353)
T ss_dssp SSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCE
T ss_pred CCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCc
Confidence 666665555556666666666666666665444 45666666666666666 3554455566666666666666666665
Q ss_pred CCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCcccc---CcccCceEeeeccccccc----
Q 038671 185 EMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLG---NLVKLHYLNLSNNQFIKK---- 257 (707)
Q Consensus 185 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~---~l~~L~~L~l~~n~l~~~---- 257 (707)
..|..+..+++|++|++++|.++......+..+++|+.|++++|.+++..+..+. ....++.++++++.+.+.
T Consensus 189 ~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~ 268 (353)
T 2z80_A 189 YEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQ 268 (353)
T ss_dssp ECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHH
T ss_pred cCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhh
Confidence 5666666667777777777776543333344567777777777777655444333 345677888888777653
Q ss_pred CchhhhhcccCCeeeecCccCCCCCCcccccccccceEeccccccCCchh
Q 038671 258 IPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIP 307 (707)
Q Consensus 258 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~ 307 (707)
.|..+..+++|++|++++|.++...+..|..+++|+.|++++|++.+..+
T Consensus 269 l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 269 VMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp HHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred hHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 45678889999999999999975554556899999999999999997655
No 301
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=9.9e-30 Score=274.60 Aligned_cols=252 Identities=21% Similarity=0.209 Sum_probs=166.4
Q ss_pred CCeeecccccccccCCCCCCCCCccEEEeccCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCC
Q 038671 77 LTLLTLENNQLRGPIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSN 156 (707)
Q Consensus 77 L~~L~l~~n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n 156 (707)
...++.+++.++.++..+. ++|+.|+|++|+++.+.+..|..+++|++|+|++|.++.+.+..|..+++|++|+|++|
T Consensus 56 ~~~v~c~~~~l~~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 133 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDN 133 (452)
T ss_dssp SCEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CcEEEECCCCcCccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCC
Confidence 3445555555555544433 45666666666666666666666666666666666666666666666666666666666
Q ss_pred ccCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecC-CccccCCccccCCCCcccEEEccCCccCCCCC
Q 038671 157 NITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNS-NQLCGQLSLELGSLTQLERLDLSSNRLSNSIP 235 (707)
Q Consensus 157 ~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~ 235 (707)
.++...+..|..+++|++|+|++|.++...+..|..+++|++|++++ |.++...+..|..+++|++|+|++|.+++. |
T Consensus 134 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~ 212 (452)
T 3zyi_A 134 WLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P 212 (452)
T ss_dssp CCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C
T ss_pred cCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c
Confidence 66655555566666666666666666655555666666666666666 444444444566677777777777777643 2
Q ss_pred ccccCcccCceEeeecccccccCchhhhhcccCCeeeecCccCCCCCCcccccccccceEeccccccCCchhHhhccCCC
Q 038671 236 KSLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHG 315 (707)
Q Consensus 236 ~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~ 315 (707)
.+..+++|+.|+|++|.+++..+..|.++++|+.|++++|.+++..+..|..+++|+.|++++|+|++..+..+..+++
T Consensus 213 -~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 291 (452)
T 3zyi_A 213 -NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRY 291 (452)
T ss_dssp -CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTT
T ss_pred -cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccC
Confidence 3666777777777777777777777777777777777777777666777777777777777777777666666777777
Q ss_pred ceeEeeccCcccccCCC
Q 038671 316 LSYIDISYNELHGSIPN 332 (707)
Q Consensus 316 L~~l~l~~n~~~~~~~~ 332 (707)
|+.|++++|+|.|.|..
T Consensus 292 L~~L~L~~Np~~CdC~~ 308 (452)
T 3zyi_A 292 LVELHLHHNPWNCDCDI 308 (452)
T ss_dssp CCEEECCSSCEECSTTT
T ss_pred CCEEEccCCCcCCCCCc
Confidence 77777777777777653
No 302
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=2.9e-30 Score=269.46 Aligned_cols=283 Identities=18% Similarity=0.168 Sum_probs=240.1
Q ss_pred cCCCCCcEEEcccCcCcccCCccccCCCCCCeeecccccccccCC-CCCCCCCccEEEeccCccccccCccccCCCCCcE
Q 038671 48 GNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRGPIP-NLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAF 126 (707)
Q Consensus 48 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~-~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~ 126 (707)
..++.....+++++.++ .+|..+. ++|++|++++|.++.+++ .+.++++|++|++++|+++.+.+..|..+++|++
T Consensus 28 ~~C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 104 (353)
T 2z80_A 28 LSCDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEH 104 (353)
T ss_dssp CEECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred CCCCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCE
Confidence 34555667899999999 5566554 489999999999998777 6999999999999999999998889999999999
Q ss_pred EEcccccccccCCCCCCCCCCCcEEEcCCCccCCCCc-hhhhCCCCCCEEeCCCC-CCCCCCChhhhCCCCCcEEEecCC
Q 038671 127 IDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGSMP-AEIIHSSQLKVLDLSSN-HIVGEMPSKLGKLSSLIKLILNSN 204 (707)
Q Consensus 127 L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~-~~~~~~~~L~~L~l~~n-~l~~~~~~~~~~l~~L~~L~l~~n 204 (707)
|+|++|.++.+.+..|..+++|++|+|++|.++.... ..+..+++|++|++++| .+....+..|..+++|++|++++|
T Consensus 105 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n 184 (353)
T 2z80_A 105 LDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDAS 184 (353)
T ss_dssp EECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEET
T ss_pred EECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCC
Confidence 9999999998777778999999999999999996555 57889999999999999 577667788999999999999999
Q ss_pred ccccCCccccCCCCcccEEEccCCccCCCCCccccCcccCceEeeecccccccCchhhh---hcccCCeeeecCccCCC-
Q 038671 205 QLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPVELE---KLIHLSELDLSHNFLGE- 280 (707)
Q Consensus 205 ~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~---~l~~L~~L~l~~n~l~~- 280 (707)
.+++..+..+..+++|++|++++|.++......+..+++|+.|++++|.+++..+..+. ....++.+++++|.+++
T Consensus 185 ~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~ 264 (353)
T 2z80_A 185 DLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDE 264 (353)
T ss_dssp TCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHH
T ss_pred CcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCc
Confidence 99988899999999999999999999855555566789999999999999876554433 35678888999888865
Q ss_pred ---CCCcccccccccceEeccccccCCchhHhhccCCCceeEeeccCcccccCCCc
Q 038671 281 ---EMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDISYNELHGSIPNS 333 (707)
Q Consensus 281 ---~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~ 333 (707)
..|..+..+++|+.|++++|+++...+..+..+++|+.|++++|+|.|.+|..
T Consensus 265 ~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~~l 320 (353)
T 2z80_A 265 SLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 320 (353)
T ss_dssp HHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHHH
T ss_pred chhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCCCc
Confidence 35667788999999999999999665555789999999999999999998743
No 303
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=2.8e-30 Score=264.05 Aligned_cols=275 Identities=24% Similarity=0.267 Sum_probs=179.6
Q ss_pred CeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeeccccccccc---CCCCCCCCCccEEEec
Q 038671 30 SDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRGP---IPNLRNLTSLVRVRLN 106 (707)
Q Consensus 30 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~---~~~l~~l~~L~~L~l~ 106 (707)
+.++.+++.++ .+|..+. ++|++|+|++|.++...+..|+++++|++|++++|.++.. +..+..+++|++|+++
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 35666666666 4454332 4666666666666654444566666666666666665532 1223344455555555
Q ss_pred cCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccCCCCc-hhhhCCCCCCEEeCCCCCCCCC
Q 038671 107 QNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGSMP-AEIIHSSQLKVLDLSSNHIVGE 185 (707)
Q Consensus 107 ~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~-~~~~~~~~L~~L~l~~n~l~~~ 185 (707)
+|.++.++ ..+..+++|++|++++|.+++... ..+..+++|++|++++|.+.+.
T Consensus 87 ~n~i~~l~-------------------------~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 141 (306)
T 2z66_A 87 FNGVITMS-------------------------SNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVA 141 (306)
T ss_dssp SCSEEEEE-------------------------EEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEEC
T ss_pred CCccccCh-------------------------hhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCcc
Confidence 55544332 224445555555555555543332 3455566666666666666655
Q ss_pred CChhhhCCCCCcEEEecCCcccc-CCccccCCCCcccEEEccCCccCCCCCccccCcccCceEeeecccccccCchhhhh
Q 038671 186 MPSKLGKLSSLIKLILNSNQLCG-QLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPVELEK 264 (707)
Q Consensus 186 ~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~ 264 (707)
.+..+..+++|++|++++|.+++ ..+..+..+++|++|++++|.+++..+..|..+++|+.|++++|++++..+..+..
T Consensus 142 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 221 (306)
T 2z66_A 142 FNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKC 221 (306)
T ss_dssp STTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTT
T ss_pred chhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccC
Confidence 66666667777777777777764 45667777788888888888887777777888888888888888887777777888
Q ss_pred cccCCeeeecCccCCCCCCccccccc-ccceEeccccccCCchh--HhhccCCCceeEeeccCcccccCCC
Q 038671 265 LIHLSELDLSHNFLGEEMPSQICNMQ-SLEKLNLSHNNLSGFIP--SCFEELHGLSYIDISYNELHGSIPN 332 (707)
Q Consensus 265 l~~L~~L~l~~n~l~~~~~~~~~~~~-~L~~L~l~~n~i~~~~~--~~~~~~~~L~~l~l~~n~~~~~~~~ 332 (707)
+++|+.|++++|.+++..+..+..++ +|+.|++++|++++... ....-+...+.+.+..+.+.|..|.
T Consensus 222 l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~ 292 (306)
T 2z66_A 222 LNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPS 292 (306)
T ss_dssp CTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESG
T ss_pred cccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCch
Confidence 88888888888888888888888874 89999999999876532 2222344555667777888887664
No 304
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.97 E-value=1.4e-29 Score=271.93 Aligned_cols=185 Identities=19% Similarity=0.233 Sum_probs=81.8
Q ss_pred CCCceeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCC-------------cEEEcccCcCcccCCc
Q 038671 3 SNLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQI-------------TFLTLFDNALSGAIPK 69 (707)
Q Consensus 3 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L-------------~~L~L~~n~i~~~~~~ 69 (707)
+.|++|++++|.+ +.+|..|+++++|++|++++|++++.+|..++++++| ++|++++|.+++. |.
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~l-p~ 88 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSL-PE 88 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCC-CS
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccC-CC
Confidence 5677788888888 4777778888888888888888777777777776653 6777777766642 22
Q ss_pred cccCCCCCCeeecccccccccCCCCCCCCCccEEEeccCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCc
Q 038671 70 EYGNLVKLTLLTLENNQLRGPIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLG 149 (707)
Q Consensus 70 ~~~~l~~L~~L~l~~n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~ 149 (707)
. .++|++|++++|.+++++.. +++|++|++++|++++++. ..++|++|++++|.++++ + .|..+++|+
T Consensus 89 ~---~~~L~~L~l~~n~l~~lp~~---~~~L~~L~l~~n~l~~l~~----~~~~L~~L~L~~n~l~~l-p-~~~~l~~L~ 156 (454)
T 1jl5_A 89 L---PPHLESLVASCNSLTELPEL---PQSLKSLLVDNNNLKALSD----LPPLLEYLGVSNNQLEKL-P-ELQNSSFLK 156 (454)
T ss_dssp C---CTTCSEEECCSSCCSSCCCC---CTTCCEEECCSSCCSCCCS----CCTTCCEEECCSSCCSSC-C-CCTTCTTCC
T ss_pred C---cCCCCEEEccCCcCCccccc---cCCCcEEECCCCccCcccC----CCCCCCEEECcCCCCCCC-c-ccCCCCCCC
Confidence 1 24566666666666554322 2444555555554443321 013444444444444432 2 244444444
Q ss_pred EEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccc
Q 038671 150 TLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLC 207 (707)
Q Consensus 150 ~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 207 (707)
+|++++|.+++ .+.. ..+|++|++++|.+++ +| .+..+++|++|++++|.++
T Consensus 157 ~L~l~~N~l~~-lp~~---~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~ 208 (454)
T 1jl5_A 157 IIDVDNNSLKK-LPDL---PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLK 208 (454)
T ss_dssp EEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCS
T ss_pred EEECCCCcCcc-cCCC---cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCC
Confidence 44444444442 1111 1244444444444442 22 2444444444444444444
No 305
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=4.2e-29 Score=269.71 Aligned_cols=245 Identities=24% Similarity=0.258 Sum_probs=132.8
Q ss_pred CeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeecccccccccCC-CCCCCCCccEEEeccC
Q 038671 30 SDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRGPIP-NLRNLTSLVRVRLNQN 108 (707)
Q Consensus 30 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~-~l~~l~~L~~L~l~~n 108 (707)
..++.+++.++ .+|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|.|+.+.+ .|.++++|++|+|++|
T Consensus 57 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 133 (452)
T 3zyi_A 57 SKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDN 133 (452)
T ss_dssp CEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred cEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCC
Confidence 34444444444 3333322 345555555555554444555555555555555555544432 3445555555555555
Q ss_pred ccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCC-CccCCCCchhhhCCCCCCEEeCCCCCCCCCCC
Q 038671 109 HLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSS-NNITGSMPAEIIHSSQLKVLDLSSNHIVGEMP 187 (707)
Q Consensus 109 ~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~-n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 187 (707)
+++.+++..|..+++|++|+|++|.++.+.+..|..+++|+.|+|++ |.++......|.++++|+.|+|++|.+++ +|
T Consensus 134 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~ 212 (452)
T 3zyi_A 134 WLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP 212 (452)
T ss_dssp CCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC
T ss_pred cCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc
Confidence 55555544555555555555555555555445555555555555555 33333333445555555555555555552 22
Q ss_pred hhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccccCcccCceEeeecccccccCchhhhhccc
Q 038671 188 SKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPVELEKLIH 267 (707)
Q Consensus 188 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 267 (707)
.+..+++|++|++++|.+++..+..|..+++|+.|+|++|.+++..+..|.++++|+.|+|++|++++..+..|..+++
T Consensus 213 -~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 291 (452)
T 3zyi_A 213 -NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRY 291 (452)
T ss_dssp -CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTT
T ss_pred -cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccC
Confidence 2455566666666666666555566666666666666666666555666666666666666666666555555666666
Q ss_pred CCeeeecCccCC
Q 038671 268 LSELDLSHNFLG 279 (707)
Q Consensus 268 L~~L~l~~n~l~ 279 (707)
|+.|+|++|++.
T Consensus 292 L~~L~L~~Np~~ 303 (452)
T 3zyi_A 292 LVELHLHHNPWN 303 (452)
T ss_dssp CCEEECCSSCEE
T ss_pred CCEEEccCCCcC
Confidence 666666666653
No 306
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=4.9e-29 Score=268.15 Aligned_cols=245 Identities=21% Similarity=0.244 Sum_probs=138.1
Q ss_pred CceeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeeccc
Q 038671 5 LAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLEN 84 (707)
Q Consensus 5 l~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~ 84 (707)
...++.++++++ .+|..+. ++++.|+|++|+++...+..|.++++|++|+|++|.|++..+..|.++++|++|+|++
T Consensus 45 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 45 FSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp SCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCS
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCC
Confidence 345566666666 5555444 4666666666666655556666666666666666666655556666666666666666
Q ss_pred ccccccCC-CCCCCCCccEEEeccCccccccCccccCCCCCcEEEccc-ccccccCCCCCCCCCCCcEEEcCCCccCCCC
Q 038671 85 NQLRGPIP-NLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSH-NYFYGEISSDWGRCPKLGTLDFSSNNITGSM 162 (707)
Q Consensus 85 n~i~~~~~-~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~-n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~ 162 (707)
|+++.+++ .+..+++|++|+|++|+++.+....|..+++|++|+|++ |.+..+.+..|..+++|++|+|++|.++..
T Consensus 122 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~- 200 (440)
T 3zyj_A 122 NRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI- 200 (440)
T ss_dssp SCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSC-
T ss_pred CcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccc-
Confidence 66665554 355666666666666666666555566666666666665 344444444555555666666666555522
Q ss_pred chhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccccCcc
Q 038671 163 PAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLV 242 (707)
Q Consensus 163 ~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~ 242 (707)
+ .+..+++|+.|+|++|.+++..+..|..+++|++|++++|+++...+..|..+++|+.|+|++|+++...+..|..++
T Consensus 201 ~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 279 (440)
T 3zyj_A 201 P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLH 279 (440)
T ss_dssp C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCT
T ss_pred c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhcccc
Confidence 2 244455555555555555544455555555555555555555544444455555555555555555544444444455
Q ss_pred cCceEeeecccc
Q 038671 243 KLHYLNLSNNQF 254 (707)
Q Consensus 243 ~L~~L~l~~n~l 254 (707)
+|+.|+|++|++
T Consensus 280 ~L~~L~L~~Np~ 291 (440)
T 3zyj_A 280 HLERIHLHHNPW 291 (440)
T ss_dssp TCCEEECCSSCE
T ss_pred CCCEEEcCCCCc
Confidence 555555555543
No 307
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=2e-29 Score=254.79 Aligned_cols=225 Identities=22% Similarity=0.212 Sum_probs=131.9
Q ss_pred CeeecccccccccCCCCCCCCCccEEEeccCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCc
Q 038671 78 TLLTLENNQLRGPIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNN 157 (707)
Q Consensus 78 ~~L~l~~n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~ 157 (707)
+.++.+++.++.++.++ .++|++|++++|.++.+.+..|..+++|++|+|++|.++.+.+..|..+++|++|+|++|.
T Consensus 14 ~~~~c~~~~l~~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 91 (285)
T 1ozn_A 14 VTTSCPQQGLQAVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA 91 (285)
T ss_dssp CEEECCSSCCSSCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCT
T ss_pred eEEEcCcCCcccCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCC
Confidence 55666666666655433 3466666666666666666666666666666666666666666666666666666666665
Q ss_pred -cCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCc
Q 038671 158 -ITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPK 236 (707)
Q Consensus 158 -i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~ 236 (707)
++...+..+..+++|++|++++|.+++..+..|..+++|++|++++|.++...+..+..+++|++|+|++|.+++..+.
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 171 (285)
T 1ozn_A 92 QLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPER 171 (285)
T ss_dssp TCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTT
T ss_pred CccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHH
Confidence 5555455566666666666666666655555555566666666666666544444455555555555555555544444
Q ss_pred cccCcccCceEeeecccccccCchhhhhcccCCeeeecCccCCCCCCcccccccccceEeccccccCC
Q 038671 237 SLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSG 304 (707)
Q Consensus 237 ~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~ 304 (707)
.|.++++|+.|++++|.+++..+..+..+++|+.|++++|.+++..+..+..+++|+.|++++|++.+
T Consensus 172 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 239 (285)
T 1ozn_A 172 AFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (285)
T ss_dssp TTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred HhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccC
Confidence 45555555555555555555555555555555555555555544433444555555555555555543
No 308
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=3e-29 Score=253.45 Aligned_cols=268 Identities=20% Similarity=0.198 Sum_probs=150.2
Q ss_pred ceeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeecccc
Q 038671 6 AFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLENN 85 (707)
Q Consensus 6 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n 85 (707)
+.++.+++.++ .+|..+ .++|++|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|++++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 44556666665 444333 245666666666666555555566666666666666665555555555555555555555
Q ss_pred c-ccccCCCCCCCCCccEEEeccCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccCCCCch
Q 038671 86 Q-LRGPIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGSMPA 164 (707)
Q Consensus 86 ~-i~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~ 164 (707)
. +..+ .+..|..+++|++|++++|.++.+.+..|..+++|++|++++|.++...+.
T Consensus 91 ~~l~~~-----------------------~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 147 (285)
T 1ozn_A 91 AQLRSV-----------------------DPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDD 147 (285)
T ss_dssp TTCCCC-----------------------CTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred CCcccc-----------------------CHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHh
Confidence 4 4443 344444444445555555554444444455555555555555555544444
Q ss_pred hhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccccCcccC
Q 038671 165 EIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKL 244 (707)
Q Consensus 165 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L 244 (707)
.|..+++|+.|+|++|++++..+..|..+++|++|++++|.+++..+..+..+++|+.|++++|.+++..+..+..+++|
T Consensus 148 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 227 (285)
T 1ozn_A 148 TFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRAL 227 (285)
T ss_dssp TTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTC
T ss_pred HhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCccc
Confidence 45555556666666665554444456666666666666666665556666666777777777777766655667777777
Q ss_pred ceEeeecccccccCchhhhhcccCCeeeecCccCCCCCCccccc--ccccceEecccc
Q 038671 245 HYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICN--MQSLEKLNLSHN 300 (707)
Q Consensus 245 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--~~~L~~L~l~~n 300 (707)
+.|++++|++....+. ..-...++.+..+.+.+....|..+.+ +..+...++.+|
T Consensus 228 ~~L~l~~N~~~c~~~~-~~~~~~l~~~~~~~~~~~c~~p~~l~g~~l~~l~~~~l~~C 284 (285)
T 1ozn_A 228 QYLRLNDNPWVCDCRA-RPLWAWLQKFRGSSSEVPCSLPQRLAGRDLKRLAANDLQGC 284 (285)
T ss_dssp CEEECCSSCEECSGGG-HHHHHHHHHCCSEECCCBEEESGGGTTCBGGGSCGGGSCCC
T ss_pred CEEeccCCCccCCCCc-HHHHHHHHhcccccCccccCCchHhCCcChhhcCHHHhccC
Confidence 7777777776432211 111233455556666666666665543 334444444433
No 309
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=5.1e-28 Score=267.38 Aligned_cols=268 Identities=24% Similarity=0.266 Sum_probs=183.9
Q ss_pred CCceeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeecc
Q 038671 4 NLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLE 83 (707)
Q Consensus 4 ~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~ 83 (707)
+++.|++++|+++ .+|..+. ++|++|+|++|+++ .+|. .+++|++|+|++|+|++ +|. .+++|++|+++
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls 109 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIF 109 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEEC
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECc
Confidence 4778888888888 6676665 68888888888888 4554 56788888888888874 444 56788888888
Q ss_pred cccccccCCCCCCCCCccEEEeccCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccCCCCc
Q 038671 84 NNQLRGPIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGSMP 163 (707)
Q Consensus 84 ~n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~ 163 (707)
+|.++.++. .+++|+.|++++|+++.++. .+++|++|+|++|.++.+.. .+++|+.|++++|.++.. +
T Consensus 110 ~N~l~~l~~---~l~~L~~L~L~~N~l~~lp~----~l~~L~~L~Ls~N~l~~l~~----~~~~L~~L~L~~N~l~~l-~ 177 (622)
T 3g06_A 110 SNPLTHLPA---LPSGLCKLWIFGNQLTSLPV----LPPGLQELSVSDNQLASLPA----LPSELCKLWAYNNQLTSL-P 177 (622)
T ss_dssp SCCCCCCCC---CCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSCC-C
T ss_pred CCcCCCCCC---CCCCcCEEECCCCCCCcCCC----CCCCCCEEECcCCcCCCcCC----ccCCCCEEECCCCCCCCC-c
Confidence 888877655 56778888888888876654 24778888888887775432 346777788888877743 3
Q ss_pred hhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccccCccc
Q 038671 164 AEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVK 243 (707)
Q Consensus 164 ~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~ 243 (707)
..+++|+.|++++|.+++ +|.. +++|+.|++++|.++. .+. .+++|++|+|++|.++++ | ..+++
T Consensus 178 ---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~~---~~~~L~~L~Ls~N~L~~l-p---~~l~~ 242 (622)
T 3g06_A 178 ---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPA---LPSGLKELIVSGNRLTSL-P---VLPSE 242 (622)
T ss_dssp ---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CCC---CCTTCCEEECCSSCCSCC-C---CCCTT
T ss_pred ---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccc-cCC---CCCCCCEEEccCCccCcC-C---CCCCc
Confidence 345777777777777763 3332 3677777777777773 332 246777777777777743 3 34466
Q ss_pred CceEeeecccccccCchhhhhcccCCeeeecCccCCCCCCcccccccccceEeccccccCCchhHhhccCC
Q 038671 244 LHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELH 314 (707)
Q Consensus 244 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~ 314 (707)
|+.|+|++|+|+.... .+++|+.|+|++|.|+ .+|..+.++++|+.|++++|++++..+..+..++
T Consensus 243 L~~L~Ls~N~L~~lp~----~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 243 LKELMVSGNRLTSLPM----LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp CCEEECCSSCCSCCCC----CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred CcEEECCCCCCCcCCc----ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 7777777777764333 4566777777777775 4566677777777777777777766666555443
No 310
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96 E-value=1.6e-30 Score=285.69 Aligned_cols=187 Identities=19% Similarity=0.159 Sum_probs=132.6
Q ss_pred eeecCCeeEEEE-EcCCCcEEEEEecCCCCCc-------hhhhHHHHHHHHHHHhcC-CCCceeeeeeeeecCCceeEEE
Q 038671 444 IGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPS-------EMASQQEFLNEVKTLTGI-RHRNIVKFYGFCSHARHSFIVY 514 (707)
Q Consensus 444 lg~G~~g~vy~~-~~~~~~~vavK~~~~~~~~-------~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 514 (707)
.+.|+.|....+ +...|+.+++|++...... .....+++.+|+++|+++ +|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 455666655555 3445888999998654211 122346699999999999 6999999999999999999999
Q ss_pred eeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCC
Q 038671 515 EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPD 594 (707)
Q Consensus 515 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~ 594 (707)
||++|++|.+.+...+ +++.. +|+.||+.||+|+|++ |||||||||+|||++.+|.+||+|||+|+.....
T Consensus 322 Eyv~G~~L~d~i~~~~---~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGE---EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp ECCCSEEHHHHHHTTC---CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred ecCCCCcHHHHHHhCC---CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence 9999999999997543 35543 5889999999999999 9999999999999999999999999999887766
Q ss_pred CCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCC
Q 038671 595 SSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640 (707)
Q Consensus 595 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p 640 (707)
.......+||+.|||||++.+. +..++|+||+|++++++.+|..+
T Consensus 393 ~~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 393 CSWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp -CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CccccCceechhhccHHHhCCC-CCCcccccccccchhhhccccch
Confidence 6666778899999999998764 67789999999998877665444
No 311
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=5.6e-30 Score=262.66 Aligned_cols=256 Identities=21% Similarity=0.223 Sum_probs=148.8
Q ss_pred EECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeecccccccccCCCCCCCCCccEEEeccCccc
Q 038671 32 LELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRGPIPNLRNLTSLVRVRLNQNHLT 111 (707)
Q Consensus 32 L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~l~~l~~L~~L~l~~n~l~ 111 (707)
++++.+.+.......+..+++|++|+|++|.+++..|..|+.+++|++|+|++|.+...++ +..+++|++|++++|+++
T Consensus 15 ~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-~~~l~~L~~L~Ls~n~l~ 93 (317)
T 3o53_A 15 EKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-LESLSTLRTLDLNNNYVQ 93 (317)
T ss_dssp ESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE-ETTCTTCCEEECCSSEEE
T ss_pred eeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh-hhhcCCCCEEECcCCccc
Confidence 3444455443333344445555555555555555545555555555555555555554333 555555555555555555
Q ss_pred cccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhh
Q 038671 112 GNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLG 191 (707)
Q Consensus 112 ~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~ 191 (707)
++. ..++|++|++++|.++.+.+.. +++|++|++++|.+++..+..+..+++|++|++++|.+++..+..+.
T Consensus 94 ~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 165 (317)
T 3o53_A 94 ELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELA 165 (317)
T ss_dssp EEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGG
T ss_pred ccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHh
Confidence 433 2256666666666665543322 45566666666666655555566666666666666666654444443
Q ss_pred -CCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccccCcccCceEeeecccccccCchhhhhcccCCe
Q 038671 192 -KLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSE 270 (707)
Q Consensus 192 -~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 270 (707)
.+++|++|++++|.+++.. ....+++|++|+|++|.+++..+ .+..+++|+.|++++|+++. .|..+..+++|+.
T Consensus 166 ~~l~~L~~L~L~~N~l~~~~--~~~~l~~L~~L~Ls~N~l~~l~~-~~~~l~~L~~L~L~~N~l~~-l~~~~~~l~~L~~ 241 (317)
T 3o53_A 166 ASSDTLEHLNLQYNFIYDVK--GQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEH 241 (317)
T ss_dssp GGTTTCCEEECTTSCCCEEE--CCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCE
T ss_pred hccCcCCEEECCCCcCcccc--cccccccCCEEECCCCcCCcchh-hhcccCcccEEECcCCcccc-hhhHhhcCCCCCE
Confidence 5666666666666666432 22246677777777777764333 36666777777777777654 3445666677777
Q ss_pred eeecCccCC-CCCCcccccccccceEecccc
Q 038671 271 LDLSHNFLG-EEMPSQICNMQSLEKLNLSHN 300 (707)
Q Consensus 271 L~l~~n~l~-~~~~~~~~~~~~L~~L~l~~n 300 (707)
|++++|.++ +..+..+..++.|+.+++++|
T Consensus 242 L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~ 272 (317)
T 3o53_A 242 FDLRGNGFHCGTLRDFFSKNQRVQTVAKQTV 272 (317)
T ss_dssp EECTTCCCBHHHHHHHHHTCHHHHHHHHHHH
T ss_pred EEccCCCccCcCHHHHHhccccceEEECCCc
Confidence 777777775 455566666677777776643
No 312
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=6e-28 Score=248.26 Aligned_cols=233 Identities=20% Similarity=0.253 Sum_probs=123.9
Q ss_pred CCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeecccccccccCCCCCCCCCccEEEec
Q 038671 27 KSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRGPIPNLRNLTSLVRVRLN 106 (707)
Q Consensus 27 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~l~~l~~L~~L~l~ 106 (707)
++++.|+|++|+++ .+|..+.++++|++|+|++|.++ .+|..|+++++|++|+|++|.++.++..+..+++|++|+++
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~~lp~~l~~l~~L~~L~L~ 158 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLRALPASIASLNRLRELSIR 158 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCCCCCGGGGGCTTCCEEEEE
T ss_pred cceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccccCcHHHhcCcCCCEEECC
Confidence 44555555555555 44444445555555555555555 44444555555555555555555444444445555555555
Q ss_pred cCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCC
Q 038671 107 QNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEM 186 (707)
Q Consensus 107 ~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 186 (707)
+|++.+..+..+.. . .....|..+++|++|+|++|.++ ..+..+..+++|+.|+|++|.++ .+
T Consensus 159 ~n~~~~~~p~~~~~------~---------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l 221 (328)
T 4fcg_A 159 ACPELTELPEPLAS------T---------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-AL 221 (328)
T ss_dssp EETTCCCCCSCSEE------E---------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CC
T ss_pred CCCCccccChhHhh------c---------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cC
Confidence 44433333322221 0 00111233555555555555555 44444555555555555555555 34
Q ss_pred ChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccccCcccCceEeeecccccccCchhhhhcc
Q 038671 187 PSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPVELEKLI 266 (707)
Q Consensus 187 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 266 (707)
|..+..+++|++|++++|.+.+..|..+..+++|++|+|++|.+.+..|..+.++++|+.|+|++|++.+..|..+..++
T Consensus 222 ~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~ 301 (328)
T 4fcg_A 222 GPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLP 301 (328)
T ss_dssp CGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSC
T ss_pred chhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhcc
Confidence 44455566666666666665555555666666666666666666556666666666666666666666666666666666
Q ss_pred cCCeeeecCccC
Q 038671 267 HLSELDLSHNFL 278 (707)
Q Consensus 267 ~L~~L~l~~n~l 278 (707)
+|+.+++..|.+
T Consensus 302 ~L~~l~l~~~~~ 313 (328)
T 4fcg_A 302 ANCIILVPPHLQ 313 (328)
T ss_dssp TTCEEECCGGGS
T ss_pred CceEEeCCHHHH
Confidence 666666665554
No 313
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=5.2e-27 Score=259.35 Aligned_cols=262 Identities=25% Similarity=0.245 Sum_probs=222.2
Q ss_pred CCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeecccccccccCCCCCCCCCccEEEecc
Q 038671 28 SLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRGPIPNLRNLTSLVRVRLNQ 107 (707)
Q Consensus 28 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~l~~l~~L~~L~l~~ 107 (707)
+++.|++++|+++ .+|..+. ++|++|+|++|.|+. +|. .+++|++|+|++|+|+.++. .+++|++|++++
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~ 110 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTSLPV---LPPGLLELSIFS 110 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSC-CCC---CCTTCCEEEECSCCCSCCCC---CCTTCCEEEECS
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCC-CCC---cCCCCCEEEcCCCcCCcCCC---CCCCCCEEECcC
Confidence 6899999999999 7787665 899999999999994 454 57899999999999998766 779999999999
Q ss_pred CccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCCC
Q 038671 108 NHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEMP 187 (707)
Q Consensus 108 n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 187 (707)
|+++.++. .+++|+.|++++|.++.+.. .+++|++|+|++|.+++. +. .+++|+.|++++|.++. +|
T Consensus 111 N~l~~l~~----~l~~L~~L~L~~N~l~~lp~----~l~~L~~L~Ls~N~l~~l-~~---~~~~L~~L~L~~N~l~~-l~ 177 (622)
T 3g06_A 111 NPLTHLPA----LPSGLCKLWIFGNQLTSLPV----LPPGLQELSVSDNQLASL-PA---LPSELCKLWAYNNQLTS-LP 177 (622)
T ss_dssp CCCCCCCC----CCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSC-CC
T ss_pred CcCCCCCC----CCCCcCEEECCCCCCCcCCC----CCCCCCEEECcCCcCCCc-CC---ccCCCCEEECCCCCCCC-Cc
Confidence 99998765 67899999999999997543 358999999999999854 32 35789999999999984 55
Q ss_pred hhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccccCcccCceEeeecccccccCchhhhhccc
Q 038671 188 SKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPVELEKLIH 267 (707)
Q Consensus 188 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 267 (707)
..+++|+.|++++|.+++ ++. .+++|+.|++++|.++.. |. .+++|+.|+|++|++++.. ..+++
T Consensus 178 ---~~~~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~l-~~---~~~~L~~L~Ls~N~L~~lp----~~l~~ 242 (622)
T 3g06_A 178 ---MLPSGLQELSVSDNQLAS-LPT---LPSELYKLWAYNNRLTSL-PA---LPSGLKELIVSGNRLTSLP----VLPSE 242 (622)
T ss_dssp ---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSC-CC---CCTTCCEEECCSSCCSCCC----CCCTT
T ss_pred ---ccCCCCcEEECCCCCCCC-CCC---ccchhhEEECcCCccccc-CC---CCCCCCEEEccCCccCcCC----CCCCc
Confidence 456899999999999995 333 358999999999999854 43 2478999999999998743 45689
Q ss_pred CCeeeecCccCCCCCCcccccccccceEeccccccCCchhHhhccCCCceeEeeccCcccccCCC
Q 038671 268 LSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDISYNELHGSIPN 332 (707)
Q Consensus 268 L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~l~~n~~~~~~~~ 332 (707)
|+.|++++|.|+. +|. .+++|+.|++++|+|+ .+|..+..+++|+.|++++|++++.++.
T Consensus 243 L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~ 302 (622)
T 3g06_A 243 LKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 302 (622)
T ss_dssp CCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHH
T ss_pred CcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHH
Confidence 9999999999974 454 6789999999999999 5588899999999999999999987654
No 314
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=8.2e-30 Score=261.41 Aligned_cols=263 Identities=23% Similarity=0.224 Sum_probs=178.8
Q ss_pred CcEEEcccCcCcccCCccccCCCCCCeeecccccccccCC-CCCCCCCccEEEeccCccccccCccccCCCCCcEEEccc
Q 038671 53 ITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRGPIP-NLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSH 131 (707)
Q Consensus 53 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~-~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~ 131 (707)
++.++++++.+.......+..+++|++|+|++|.++.+++ .+..+++|++|++++|++++..+ +..+++|++|+|++
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~ 89 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNN 89 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCS
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcC
Confidence 3444566666665555556666777777777777776553 46777777777777777776543 77777777777777
Q ss_pred ccccccCCCCCCCCCCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCc
Q 038671 132 NYFYGEISSDWGRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLS 211 (707)
Q Consensus 132 n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 211 (707)
|.++++. ..++|++|++++|.+++..+. .+++|+.|++++|++++..+..+..+++|++|++++|.+++..+
T Consensus 90 n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 161 (317)
T 3o53_A 90 NYVQELL-----VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNF 161 (317)
T ss_dssp SEEEEEE-----ECTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEG
T ss_pred Ccccccc-----CCCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccH
Confidence 7776543 236777777777777754433 25667777777777776666677777777777777777776555
Q ss_pred ccc-CCCCcccEEEccCCccCCCCCccccCcccCceEeeecccccccCchhhhhcccCCeeeecCccCCCCCCccccccc
Q 038671 212 LEL-GSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQ 290 (707)
Q Consensus 212 ~~~-~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~ 290 (707)
..+ ..+++|++|+|++|.+++.. ....+++|++|+|++|++++..+. +..+++|+.|++++|.++ .+|..+..++
T Consensus 162 ~~~~~~l~~L~~L~L~~N~l~~~~--~~~~l~~L~~L~Ls~N~l~~l~~~-~~~l~~L~~L~L~~N~l~-~l~~~~~~l~ 237 (317)
T 3o53_A 162 AELAASSDTLEHLNLQYNFIYDVK--GQVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLV-LIEKALRFSQ 237 (317)
T ss_dssp GGGGGGTTTCCEEECTTSCCCEEE--CCCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCC-EECTTCCCCT
T ss_pred HHHhhccCcCCEEECCCCcCcccc--cccccccCCEEECCCCcCCcchhh-hcccCcccEEECcCCccc-chhhHhhcCC
Confidence 555 35777777777777776542 223467777777777777655443 777777777777777775 3566677777
Q ss_pred ccceEeccccccC-CchhHhhccCCCceeEeecc-Cccccc
Q 038671 291 SLEKLNLSHNNLS-GFIPSCFEELHGLSYIDISY-NELHGS 329 (707)
Q Consensus 291 ~L~~L~l~~n~i~-~~~~~~~~~~~~L~~l~l~~-n~~~~~ 329 (707)
+|+.|++++|++. +..+..+..+++|+.+++.+ +.+.+.
T Consensus 238 ~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~ 278 (317)
T 3o53_A 238 NLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQ 278 (317)
T ss_dssp TCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCC
Confidence 7777777777777 55666777777777777773 334443
No 315
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=1.7e-27 Score=244.95 Aligned_cols=237 Identities=20% Similarity=0.238 Sum_probs=194.3
Q ss_pred CCCCcEEEcccCcCcccCCccccCCCCCCeeecccccccccCCCCCCCCCccEEEeccCccccccCccccCCCCCcEEEc
Q 038671 50 LTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRGPIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDL 129 (707)
Q Consensus 50 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L 129 (707)
.++++.|+|++|.++ .+|..+.++++|++|+|++|.+..++..+..+++|++|+|++|+++.+ +..+..+++|++|+|
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~~l-p~~l~~l~~L~~L~L 157 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLMELPDTMQQFAGLETLTLARNPLRAL-PASIASLNRLRELSI 157 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCCCCCSCGGGGTTCSEEEEESCCCCCC-CGGGGGCTTCCEEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCccchhHHHhccCCCCEEECCCCccccC-cHHHhcCcCCCEEEC
Confidence 467778888888777 556667777778888888877776666677777777777777777743 455677777777777
Q ss_pred ccccccccCCCCCCCCCCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccC
Q 038671 130 SHNYFYGEISSDWGRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQ 209 (707)
Q Consensus 130 ~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 209 (707)
++|.+.+..+..+.. .. ....+.++++|++|+|++|.++ .+|..+..+++|++|++++|.+++
T Consensus 158 ~~n~~~~~~p~~~~~------~~---------~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~- 220 (328)
T 4fcg_A 158 RACPELTELPEPLAS------TD---------ASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA- 220 (328)
T ss_dssp EEETTCCCCCSCSEE------EC----------CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-
T ss_pred CCCCCccccChhHhh------cc---------chhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-
Confidence 776665444443322 11 1223566999999999999999 888899999999999999999995
Q ss_pred CccccCCCCcccEEEccCCccCCCCCccccCcccCceEeeecccccccCchhhhhcccCCeeeecCccCCCCCCcccccc
Q 038671 210 LSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNM 289 (707)
Q Consensus 210 ~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 289 (707)
.+..+..+++|++|+|++|.+.+..|..+.++++|+.|+|++|.+.+..|..+..+++|+.|+|++|.+.+.+|..+..+
T Consensus 221 l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L 300 (328)
T 4fcg_A 221 LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQL 300 (328)
T ss_dssp CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGS
T ss_pred CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhc
Confidence 56679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccceEeccccccCCc
Q 038671 290 QSLEKLNLSHNNLSGF 305 (707)
Q Consensus 290 ~~L~~L~l~~n~i~~~ 305 (707)
++|+.+++..|.+...
T Consensus 301 ~~L~~l~l~~~~~~~l 316 (328)
T 4fcg_A 301 PANCIILVPPHLQAQL 316 (328)
T ss_dssp CTTCEEECCGGGSCC-
T ss_pred cCceEEeCCHHHHHHH
Confidence 9999999998887643
No 316
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=2.3e-29 Score=257.44 Aligned_cols=248 Identities=24% Similarity=0.245 Sum_probs=191.8
Q ss_pred ccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCc-ccCCcccc-------CCCCCCeeecccccccc-cCCC
Q 038671 23 IGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALS-GAIPKEYG-------NLVKLTLLTLENNQLRG-PIPN 93 (707)
Q Consensus 23 ~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~-~~~~~~~~-------~l~~L~~L~l~~n~i~~-~~~~ 93 (707)
+...++|++|++++|.+ .+|..+... |+.|+|++|.++ ...|..+. ++++|++|++++|.+++ .+..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 45566788888888888 456655443 888888888884 34555554 68888888888888875 4444
Q ss_pred C--CCCCCccEEEeccCccccccCccccCC-----CCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccCCC--Cch
Q 038671 94 L--RNLTSLVRVRLNQNHLTGNISESFGIH-----PNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGS--MPA 164 (707)
Q Consensus 94 l--~~l~~L~~L~l~~n~l~~~~~~~~~~~-----~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~--~~~ 164 (707)
+ ..+++|++|++++|++++. +..+..+ ++|++|+|++|.++.+.+..|..+++|++|+|++|.+.+. .+.
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 4 7888888888888888877 5666665 8899999999999888888888899999999999987643 222
Q ss_pred hh--hCCCCCCEEeCCCCCCCC---CCChhhhCCCCCcEEEecCCccccCCc-cccCCCCcccEEEccCCccCCCCCccc
Q 038671 165 EI--IHSSQLKVLDLSSNHIVG---EMPSKLGKLSSLIKLILNSNQLCGQLS-LELGSLTQLERLDLSSNRLSNSIPKSL 238 (707)
Q Consensus 165 ~~--~~~~~L~~L~l~~n~l~~---~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~i~~~~~~~l 238 (707)
.+ ..+++|++|+|++|++++ .....+..+++|++|++++|++++..+ ..+..+++|++|+|++|.++ .+|..+
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~ 272 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGL 272 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSC
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhc
Confidence 33 778899999999998872 222444577899999999999987664 45667889999999999998 556656
Q ss_pred cCcccCceEeeecccccccCchhhhhcccCCeeeecCccCCC
Q 038671 239 GNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGE 280 (707)
Q Consensus 239 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 280 (707)
. ++|++|+|++|++++. |. +..+++|++|++++|++++
T Consensus 273 ~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 273 P--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp C--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred c--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 5 7899999999999776 44 8888999999999999865
No 317
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=5.7e-29 Score=254.52 Aligned_cols=250 Identities=20% Similarity=0.208 Sum_probs=182.1
Q ss_pred cccCCCCCCeeecccccccccCCCCCCCCCccEEEeccCcccccc-Ccccc-------CCCCCcEEEcccccccccCCCC
Q 038671 70 EYGNLVKLTLLTLENNQLRGPIPNLRNLTSLVRVRLNQNHLTGNI-SESFG-------IHPNLAFIDLSHNYFYGEISSD 141 (707)
Q Consensus 70 ~~~~l~~L~~L~l~~n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~-~~~~~-------~~~~L~~L~L~~n~i~~~~~~~ 141 (707)
.++..++|++|++++|.+ .++..+... |+.|++++|.++... +..+. .+++|++|+|++|.+++..+..
T Consensus 38 ~~~~~~~L~~l~l~~n~l-~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 38 LYGGGRSLEYLLKRVDTE-ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEEECTTHHHHCCTT-CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EEccCCCceeEeeccccc-ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 345556677777777766 444333322 666677777664322 22222 5778888888888887666665
Q ss_pred C--CCCCCCcEEEcCCCccCCCCchhhhCC-----CCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccC--Ccc
Q 038671 142 W--GRCPKLGTLDFSSNNITGSMPAEIIHS-----SQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQ--LSL 212 (707)
Q Consensus 142 ~--~~~~~L~~L~L~~n~i~~~~~~~~~~~-----~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~ 212 (707)
+ ..+++|++|+|++|.+++. +..+..+ ++|++|+|++|++.+..+..|..+++|++|++++|++.+. .+.
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 4 7788888888888888866 6666665 7888888888888877778888888888888888887643 222
Q ss_pred cc--CCCCcccEEEccCCccCCC---CCccccCcccCceEeeecccccccCc-hhhhhcccCCeeeecCccCCCCCCccc
Q 038671 213 EL--GSLTQLERLDLSSNRLSNS---IPKSLGNLVKLHYLNLSNNQFIKKIP-VELEKLIHLSELDLSHNFLGEEMPSQI 286 (707)
Q Consensus 213 ~~--~~l~~L~~L~l~~n~i~~~---~~~~l~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~ 286 (707)
.+ ..+++|++|+|++|.+++. ....+.++++|++|++++|++++..+ ..+..+++|+.|++++|.++ .+|..+
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~ 272 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGL 272 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSC
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhc
Confidence 33 7888888888888888732 22344577889999999998877664 44666788999999999986 566665
Q ss_pred ccccccceEeccccccCCchhHhhccCCCceeEeeccCcccc
Q 038671 287 CNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDISYNELHG 328 (707)
Q Consensus 287 ~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~l~~n~~~~ 328 (707)
. ++|+.|++++|+|++. |. +..+++|+.|++++|++++
T Consensus 273 ~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 273 P--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp C--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred c--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 5 7899999999999876 54 8888999999999998875
No 318
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=9.9e-28 Score=260.13 Aligned_cols=238 Identities=24% Similarity=0.224 Sum_probs=158.1
Q ss_pred cCCCCCcEEEcccCcCcccCCccccCCCCCCeeecccccccccCCCCCCCCCccEEEeccCccccccCccccCCCCCcEE
Q 038671 48 GNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRGPIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFI 127 (707)
Q Consensus 48 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L 127 (707)
..+++|++|+|++|.+++..|..|+.+++|++|+|++|.++..++ +..+++|++|+|++|.++++++ .++|++|
T Consensus 31 ~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L 104 (487)
T 3oja_A 31 QSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-LESLSTLRTLDLNNNYVQELLV-----GPSIETL 104 (487)
T ss_dssp TTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE-CTTCTTCCEEECCSSEEEEEEE-----CTTCCEE
T ss_pred ccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc-cccCCCCCEEEecCCcCCCCCC-----CCCcCEE
Confidence 344578888888888887777778888888888888887775444 6666777777777776665432 2555666
Q ss_pred EcccccccccCCCCCCCCCCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccc
Q 038671 128 DLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLC 207 (707)
Q Consensus 128 ~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 207 (707)
++++|.++.+.+. .+ ++|+.|+|++|.+++..|..+..+++|+.|++++|.++
T Consensus 105 ~L~~N~l~~~~~~---~l------------------------~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 157 (487)
T 3oja_A 105 HAANNNISRVSCS---RG------------------------QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEID 157 (487)
T ss_dssp ECCSSCCCCEEEC---CC------------------------SSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCC
T ss_pred ECcCCcCCCCCcc---cc------------------------CCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCC
Confidence 6666555544322 22 34555555555555444445555555555555555555
Q ss_pred cCCccccC-CCCcccEEEccCCccCCCCCccccCcccCceEeeecccccccCchhhhhcccCCeeeecCccCCCCCCccc
Q 038671 208 GQLSLELG-SLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQI 286 (707)
Q Consensus 208 ~~~~~~~~-~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 286 (707)
+..+..+. .+++|++|+|++|.+++..+ +..+++|+.|+|++|.+++..+. +..+++|+.|++++|.+++ +|..+
T Consensus 158 ~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~-lp~~l 233 (487)
T 3oja_A 158 TVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLVL-IEKAL 233 (487)
T ss_dssp EEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCCE-ECTTC
T ss_pred CcChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCCCHh-HcCCCCccEEEecCCcCcc-cchhh
Confidence 54455544 56666666666666664422 33467778888888887765544 7778888888888888864 56677
Q ss_pred ccccccceEeccccccC-CchhHhhccCCCceeEeec
Q 038671 287 CNMQSLEKLNLSHNNLS-GFIPSCFEELHGLSYIDIS 322 (707)
Q Consensus 287 ~~~~~L~~L~l~~n~i~-~~~~~~~~~~~~L~~l~l~ 322 (707)
..+++|+.|++++|++. +..|..+..++.|+.+++.
T Consensus 234 ~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 234 RFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp CCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred ccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 88888999999999887 5566778888888888776
No 319
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=2.7e-26 Score=230.58 Aligned_cols=212 Identities=27% Similarity=0.287 Sum_probs=157.0
Q ss_pred CCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEe
Q 038671 122 PNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLIL 201 (707)
Q Consensus 122 ~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 201 (707)
++|++|++++|.++.+.+..|..+++|++|+|++|.+++..+..|..+++|++|++++|.+++..+..|..+++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 34566666666665555555666666666666666666555555666666666666666666555566677777777777
Q ss_pred cCCccccCCccccCCCCcccEEEccCCccCCC-CCccccCcccCceEeeecccccccCchhhhhcccCC----eeeecCc
Q 038671 202 NSNQLCGQLSLELGSLTQLERLDLSSNRLSNS-IPKSLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLS----ELDLSHN 276 (707)
Q Consensus 202 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~-~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~----~L~l~~n 276 (707)
++|.+++..+..+..+++|++|++++|.+++. .|..|+++++|+.|++++|++++..+..+..+.+|+ .|++++|
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n 187 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSS
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCC
Confidence 77777766665677778888888888888764 477888888888888888888877777777777777 8899999
Q ss_pred cCCCCCCcccccccccceEeccccccCCchhHhhccCCCceeEeeccCcccccCCCcc
Q 038671 277 FLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDISYNELHGSIPNST 334 (707)
Q Consensus 277 ~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~~ 334 (707)
.+++..+..+. ..+|+.|++++|++++..+..+..+++|+.|++++|+|+|.++...
T Consensus 188 ~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l~ 244 (276)
T 2z62_A 188 PMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 244 (276)
T ss_dssp CCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTTH
T ss_pred cccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCchH
Confidence 99766555554 4489999999999998877778899999999999999999988654
No 320
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=9.1e-28 Score=260.43 Aligned_cols=236 Identities=24% Similarity=0.220 Sum_probs=191.3
Q ss_pred CCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeecccccccccCCCCCCCCCccEEEe
Q 038671 26 LKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRGPIPNLRNLTSLVRVRL 105 (707)
Q Consensus 26 l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~l~~l~~L~~L~l 105 (707)
+++|++|+|++|.+++..|..|.++++|++|+|++|.+++..| |..+++|++|+|++|.++.+++. ++|+.|++
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~----~~L~~L~L 106 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVG----PSIETLHA 106 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEEC----TTCCEEEC
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCC----CCcCEEEC
Confidence 3489999999999998888899999999999999999987655 99999999999999999876543 89999999
Q ss_pred ccCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccCCCCchhhh-CCCCCCEEeCCCCCCCC
Q 038671 106 NQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGSMPAEII-HSSQLKVLDLSSNHIVG 184 (707)
Q Consensus 106 ~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~-~~~~L~~L~l~~n~l~~ 184 (707)
++|.++.+.+. .+++|+.|+|++|.+++..+..+..+++|+.|+|++|.+++..+..+. .+++|+.|+|++|.+++
T Consensus 107 ~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~ 183 (487)
T 3oja_A 107 ANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD 183 (487)
T ss_dssp CSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE
T ss_pred cCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccc
Confidence 99999987664 458899999999999988888899999999999999999987777776 68899999999998875
Q ss_pred CCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccccCcccCceEeeeccccc-ccCchhhh
Q 038671 185 EMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFI-KKIPVELE 263 (707)
Q Consensus 185 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~ 263 (707)
..+ +..+++|+.|+|++|.+++..+ .+..+++|+.|+|++|.+++ +|..+..+++|+.|++++|.+. +..+..+.
T Consensus 184 ~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~ 259 (487)
T 3oja_A 184 VKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFS 259 (487)
T ss_dssp EEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHT
T ss_pred ccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHH
Confidence 422 3357788888888888875444 47777888888888888874 5556777777778888777775 44455566
Q ss_pred hcccCCeeeec
Q 038671 264 KLIHLSELDLS 274 (707)
Q Consensus 264 ~l~~L~~L~l~ 274 (707)
.++.|+.|+++
T Consensus 260 ~l~~L~~l~~~ 270 (487)
T 3oja_A 260 KNQRVQTVAKQ 270 (487)
T ss_dssp TCHHHHHHHHH
T ss_pred hCCCCcEEecc
Confidence 66666666654
No 321
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=1e-25 Score=226.33 Aligned_cols=206 Identities=27% Similarity=0.229 Sum_probs=130.3
Q ss_pred CccEEEeccCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccCCCCchhhhCCCCCCEEeCC
Q 038671 99 SLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLS 178 (707)
Q Consensus 99 ~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~ 178 (707)
+|++|++++|+++.+.+..|..+++|++|+|++|.++.+.+..|..+++|++|+|++|.+++..+..|.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 45555555555555544455555555555555555555555555555555555555555555555555555666666666
Q ss_pred CCCCCCCCChhhhCCCCCcEEEecCCccccC-CccccCCCCcccEEEccCCccCCCCCccccCcccCc----eEeeeccc
Q 038671 179 SNHIVGEMPSKLGKLSSLIKLILNSNQLCGQ-LSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLH----YLNLSNNQ 253 (707)
Q Consensus 179 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~----~L~l~~n~ 253 (707)
+|.+.+..+..+..+++|++|++++|.+++. .+..+..+++|++|++++|.+++..+..+..+++|+ .|++++|.
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 6665544444566666666666666666543 356666677777777777777666666666666666 77778887
Q ss_pred ccccCchhhhhcccCCeeeecCccCCCCCCcccccccccceEeccccccCCc
Q 038671 254 FIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGF 305 (707)
Q Consensus 254 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~ 305 (707)
+.+..+..+.. .+|++|++++|.+++..+..+..+++|+.|++++|++.+.
T Consensus 189 l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 239 (276)
T 2z62_A 189 MNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 239 (276)
T ss_dssp CCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCC
T ss_pred ccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCccccc
Confidence 77665554443 4788888888888776666677888888888888888754
No 322
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=3.6e-25 Score=221.31 Aligned_cols=186 Identities=24% Similarity=0.303 Sum_probs=117.8
Q ss_pred CCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEcc
Q 038671 147 KLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLS 226 (707)
Q Consensus 147 ~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 226 (707)
+|++|+|++|.++...+..|.++++|++|+|++|.++...+..|..+++|++|++++|.++...+..|..+++|++|+++
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 117 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLD 117 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECC
Confidence 44555555555544444445555555555555555554444444555555555555555554444555566666666666
Q ss_pred CCccCCCCCccccCcccCceEeeecccccccCchhhhhcccCCeeeecCccCCCCCCcccccccccceEeccccccCCch
Q 038671 227 SNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFI 306 (707)
Q Consensus 227 ~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~ 306 (707)
+|.+++..+..|.++++|++|+|++|.+.+..+..|..+++|++|++++|.+++..+..|..+++|+.|++++|++++..
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 197 (270)
T 2o6q_A 118 RNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVP 197 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCC
Confidence 66666565666666666666666666666655555666777777777777776666666777777777777777777666
Q ss_pred hHhhccCCCceeEeeccCcccccCCC
Q 038671 307 PSCFEELHGLSYIDISYNELHGSIPN 332 (707)
Q Consensus 307 ~~~~~~~~~L~~l~l~~n~~~~~~~~ 332 (707)
+..+..+++|+.|++++|+|.|.+..
T Consensus 198 ~~~~~~l~~L~~L~l~~N~~~c~c~~ 223 (270)
T 2o6q_A 198 EGAFDSLEKLKMLQLQENPWDCTCNG 223 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCBCCSSSS
T ss_pred HHHhccccCCCEEEecCCCeeCCCcc
Confidence 66677778888888888888887764
No 323
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=1.2e-24 Score=217.49 Aligned_cols=201 Identities=26% Similarity=0.281 Sum_probs=131.1
Q ss_pred CCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeecccccccccCCC-CCCCCCccEEEec
Q 038671 28 SLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRGPIPN-LRNLTSLVRVRLN 106 (707)
Q Consensus 28 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~-l~~l~~L~~L~l~ 106 (707)
+.+.+++++++++ .+|..+. ++|++|+|++|.+++..+..|.++++|++|++++|.++.+++. +..+++|++|+++
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 3455666666665 3444332 4566666666666655555566666666666666666555443 4556666666666
Q ss_pred cCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCC
Q 038671 107 QNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEM 186 (707)
Q Consensus 107 ~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 186 (707)
+|+++.+++..|..+++|++|+|++|.++.+.+..|..+++|++|+|++|.+++..+..|..+++|+.|+|++|.+++..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 173 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVP 173 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeC
Confidence 66666666666666666666666666666666666667777777777777776655556666777777777777777665
Q ss_pred ChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccC
Q 038671 187 PSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLS 231 (707)
Q Consensus 187 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~ 231 (707)
+..|..+++|++|++++|++++..+..+..+++|+.|+|++|.+.
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 174 EGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred hhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 666777777777777777777666666777777777888777765
No 324
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.93 E-value=1.3e-24 Score=219.04 Aligned_cols=203 Identities=21% Similarity=0.196 Sum_probs=127.0
Q ss_pred ccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeecccccccccCCCCCCCCCccE
Q 038671 23 IGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRGPIPNLRNLTSLVR 102 (707)
Q Consensus 23 ~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~l~~l~~L~~ 102 (707)
++++++++++++++++++ .+|..+. ++++.|+|++|.+++..+..|.++++|++|+|++|.++.++.. ..+++|++
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~l~~L~~ 81 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD-GTLPVLGT 81 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC-SCCTTCCE
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC-CCCCcCCE
Confidence 445556666666666665 3443332 4566666666666655555566666666666666666554332 55566666
Q ss_pred EEeccCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCC
Q 038671 103 VRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHI 182 (707)
Q Consensus 103 L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l 182 (707)
|++++|+++.++ ..+..+++|++|+|++|+++.+.+..|..+++|++|+|++|.+++..+..|..+++|+.|+|++|+|
T Consensus 82 L~Ls~N~l~~l~-~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 160 (290)
T 1p9a_G 82 LDLSHNQLQSLP-LLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNL 160 (290)
T ss_dssp EECCSSCCSSCC-CCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred EECCCCcCCcCc-hhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcC
Confidence 666666666443 3455666666666666666666666666666666666666666665566666667777777777777
Q ss_pred CCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccC
Q 038671 183 VGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLS 231 (707)
Q Consensus 183 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~ 231 (707)
+...+..|..+++|++|++++|+++ .+|..+..+++|+.|+|++|.+.
T Consensus 161 ~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 161 TELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp SCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred CccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 6555555666777777777777776 45555666677777777777764
No 325
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=9.5e-25 Score=220.04 Aligned_cols=180 Identities=28% Similarity=0.256 Sum_probs=104.0
Q ss_pred CCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEcc
Q 038671 147 KLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLS 226 (707)
Q Consensus 147 ~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 226 (707)
+++.|+|++|.+++..+..|..+++|+.|+|++|.|++..+. ..+++|++|++++|+++ ..+..+..+++|++|+++
T Consensus 32 ~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~ 108 (290)
T 1p9a_G 32 DTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVS 108 (290)
T ss_dssp TCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECC
T ss_pred CCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECC
Confidence 444444444444444444444444555555555544422221 44555555555555555 344455556666666666
Q ss_pred CCccCCCCCccccCcccCceEeeecccccccCchhhhhcccCCeeeecCccCCCCCCcccccccccceEeccccccCCch
Q 038671 227 SNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFI 306 (707)
Q Consensus 227 ~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~ 306 (707)
+|++++..+..|.++++|++|+|++|++++..+..|..+++|+.|+|++|.++...+..|..+++|+.|++++|+|+ .+
T Consensus 109 ~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~i 187 (290)
T 1p9a_G 109 FNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TI 187 (290)
T ss_dssp SSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CC
T ss_pred CCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-cc
Confidence 66666555556666666666666666666555555666666666666666665555555566666666777666666 33
Q ss_pred hHhhccCCCceeEeeccCcccccC
Q 038671 307 PSCFEELHGLSYIDISYNELHGSI 330 (707)
Q Consensus 307 ~~~~~~~~~L~~l~l~~n~~~~~~ 330 (707)
|..+...++|+.+++++|+|.|.+
T Consensus 188 p~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 188 PKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp CTTTTTTCCCSEEECCSCCBCCSG
T ss_pred ChhhcccccCCeEEeCCCCccCcC
Confidence 555555667777777777777765
No 326
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=2e-25 Score=223.31 Aligned_cols=228 Identities=20% Similarity=0.182 Sum_probs=140.3
Q ss_pred CCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeecccccccccCCCCCCCCCccEEEecc
Q 038671 28 SLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRGPIPNLRNLTSLVRVRLNQ 107 (707)
Q Consensus 28 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~l~~l~~L~~L~l~~ 107 (707)
++..+++.++.+.+. ..+..+++|+.|++++|.++.. ..+..+++|++|++++|.+..+ +.+..+++|++|++++
T Consensus 20 ~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~ 94 (272)
T 3rfs_A 20 ETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDI-SALKELTNLTYLILTG 94 (272)
T ss_dssp HHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCCC-GGGTTCTTCCEEECTT
T ss_pred HHHHHHhcCcccccc--cccccccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCCc-hhhcCCCCCCEEECCC
Confidence 333444555554432 2234555556666665555522 2355555666666666655543 3455566666666666
Q ss_pred CccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCCC
Q 038671 108 NHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEMP 187 (707)
Q Consensus 108 n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 187 (707)
|.++.+.+..|..+++|++|+|++|.++.+.+..|..+++|++|+|++|.+++..+..+..+++|+.|++++|++++..+
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 174 (272)
T 3rfs_A 95 NQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPE 174 (272)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCH
Confidence 66666655556666666666666666666655556666666666666666665555556666667777777776665555
Q ss_pred hhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccccCcccCceEeeecccccccCchhhhhccc
Q 038671 188 SKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPVELEKLIH 267 (707)
Q Consensus 188 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 267 (707)
..+..+++|++|++++|.+++..+..+..+++|++|++++|.+.. .+++|+.|+++.|.+++..|..++.+..
T Consensus 175 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 175 GVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC-------CTTTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred HHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc-------cCcHHHHHHHHHHhCCCcccCcccccCC
Confidence 556666777777777777776666666777777777777776652 2456777777777777777766655443
No 327
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=6.4e-26 Score=247.79 Aligned_cols=186 Identities=16% Similarity=0.189 Sum_probs=146.5
Q ss_pred CCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCc-----hhhhHHHHHHHHHHHhcCCCCceeeeeeeeecCCceeEE
Q 038671 439 DDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPS-----EMASQQEFLNEVKTLTGIRHRNIVKFYGFCSHARHSFIV 513 (707)
Q Consensus 439 ~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 513 (707)
...+.||+|+||.||++.. .++.+++|+....... .....+++.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3456899999999999955 4778888876543221 112245689999999999999999766666677788999
Q ss_pred EeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCC
Q 038671 514 YEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKP 593 (707)
Q Consensus 514 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~ 593 (707)
|||+++++|.+++.. +..++.|+++||+|||++ +|+||||||+||+++. .+||+|||+++....
T Consensus 418 mE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 418 MSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp EECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred EECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 999999999999854 558999999999999999 9999999999999998 999999999998754
Q ss_pred CCCC-------ccccccccCCCCcccccc--CCCCccchhHHHHHHHHHHHhCCCCC
Q 038671 594 DSSN-------WAELAGTYGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHPR 641 (707)
Q Consensus 594 ~~~~-------~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~~p~ 641 (707)
.... .....||+.|+|||++.. ..|+..+|+|+...-..+-+.++.+|
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 3221 135689999999999886 56888899999999988888877775
No 328
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=6.1e-25 Score=219.82 Aligned_cols=225 Identities=21% Similarity=0.192 Sum_probs=118.2
Q ss_pred CcEEEcccCcCcccCCccccCCCCCCeeecccccccccCCCCCCCCCccEEEeccCccccccCccccCCCCCcEEEcccc
Q 038671 53 ITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRGPIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHN 132 (707)
Q Consensus 53 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n 132 (707)
+..+++.++.+.+. ..+..+++|+.|++++|.+..+ +++..+++|++|++++|+++++ ..+
T Consensus 21 l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~~-~~l~~l~~L~~L~l~~n~l~~~--~~l-------------- 81 (272)
T 3rfs_A 21 TIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKSV-QGIQYLPNVRYLALGGNKLHDI--SAL-------------- 81 (272)
T ss_dssp HHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCCC-TTGGGCTTCCEEECTTSCCCCC--GGG--------------
T ss_pred HHHHHhcCcccccc--cccccccceeeeeeCCCCcccc-cccccCCCCcEEECCCCCCCCc--hhh--------------
Confidence 33444444444422 2234455555555555555432 2344455555555555555433 234
Q ss_pred cccccCCCCCCCCCCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCcc
Q 038671 133 YFYGEISSDWGRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSL 212 (707)
Q Consensus 133 ~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 212 (707)
..+++|++|+|++|.+++..+..|..+++|++|++++|++++..+..|..+++|++|++++|.+++..+.
T Consensus 82 ----------~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 151 (272)
T 3rfs_A 82 ----------KELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKG 151 (272)
T ss_dssp ----------TTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred ----------cCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHH
Confidence 4444555555555554444444444455555555555555544444455555555555555555544444
Q ss_pred ccCCCCcccEEEccCCccCCCCCccccCcccCceEeeecccccccCchhhhhcccCCeeeecCccCCCCCCccccccccc
Q 038671 213 ELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSL 292 (707)
Q Consensus 213 ~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L 292 (707)
.+..+++|++|++++|.+++..+..|.++++|+.|++++|++++..+..+..+++|+.|++++|.+.+ .+++|
T Consensus 152 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l 224 (272)
T 3rfs_A 152 VFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGI 224 (272)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC-------CTTTT
T ss_pred HhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc-------cCcHH
Confidence 45555555555555555555555555555666666666666655555555556666666666665532 23456
Q ss_pred ceEeccccccCCchhHhhccC
Q 038671 293 EKLNLSHNNLSGFIPSCFEEL 313 (707)
Q Consensus 293 ~~L~l~~n~i~~~~~~~~~~~ 313 (707)
+.++++.|.+++.+|..++.+
T Consensus 225 ~~l~~~~n~~~g~ip~~~~~~ 245 (272)
T 3rfs_A 225 RYLSEWINKHSGVVRNSAGSV 245 (272)
T ss_dssp HHHHHHHHHTGGGBBCTTSCB
T ss_pred HHHHHHHHhCCCcccCccccc
Confidence 666666666666666555543
No 329
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.92 E-value=1.5e-26 Score=259.49 Aligned_cols=325 Identities=15% Similarity=0.091 Sum_probs=222.7
Q ss_pred CCCCceeeccCCeeeec----CCccccCCCCCCeEECCCCccc----cccCcCccCCCCCcEEEcccCcCcccCCccccC
Q 038671 2 LSNLAFLYLYNNSFSGS----IPSEIGRLKSLSDLELSGNKLC----GSIPHSLGNLTQITFLTLFDNALSGAIPKEYGN 73 (707)
Q Consensus 2 l~~l~~L~l~~n~i~~~----~~~~~~~l~~L~~L~l~~n~i~----~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~ 73 (707)
+++|++|+|++|.+++. ++..+..+++|++|+|++|.++ ..++..+.++++|++|+|++|.+.+ .+..+.+
T Consensus 163 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~ 241 (592)
T 3ogk_B 163 CRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKA 241 (592)
T ss_dssp CTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHH
T ss_pred CCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhh
Confidence 46677777777776654 2223445667777777777665 2233344566777777777777664 4566677
Q ss_pred CCCCCeeeccccccc----ccCCCCCCCCCccEEEeccCccccccCccccCCCCCcEEEcccccccccCC-CCCCCCCCC
Q 038671 74 LVKLTLLTLENNQLR----GPIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEIS-SDWGRCPKL 148 (707)
Q Consensus 74 l~~L~~L~l~~n~i~----~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~-~~~~~~~~L 148 (707)
+++|++|+++..... .....+..+++|+.|+++++... ..+..+..+++|++|+|++|.++.... ..+..+++|
T Consensus 242 ~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L 320 (592)
T 3ogk_B 242 AANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNL 320 (592)
T ss_dssp CTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTC
T ss_pred hhHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCC
Confidence 777777777643222 12234667778888888775443 334566778899999999998764332 335788999
Q ss_pred cEEEcCCCccCCC-CchhhhCCCCCCEEeCCC-----------CCCCCCC-ChhhhCCCCCcEEEecCCccccCCccccC
Q 038671 149 GTLDFSSNNITGS-MPAEIIHSSQLKVLDLSS-----------NHIVGEM-PSKLGKLSSLIKLILNSNQLCGQLSLELG 215 (707)
Q Consensus 149 ~~L~L~~n~i~~~-~~~~~~~~~~L~~L~l~~-----------n~l~~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 215 (707)
++|+++ +.+.+. .+..+..+++|+.|++++ |.+++.. +..+..+++|++|+++.|.+++.....+.
T Consensus 321 ~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~ 399 (592)
T 3ogk_B 321 EVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIG 399 (592)
T ss_dssp CEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHH
T ss_pred CEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHH
Confidence 999998 444433 233345688999999993 5665332 22345689999999999998876666666
Q ss_pred C-CCcccEEEcc----CCccCCC-----CCccccCcccCceEeeeccc--ccccCchhhhh-cccCCeeeecCccCCCC-
Q 038671 216 S-LTQLERLDLS----SNRLSNS-----IPKSLGNLVKLHYLNLSNNQ--FIKKIPVELEK-LIHLSELDLSHNFLGEE- 281 (707)
Q Consensus 216 ~-l~~L~~L~l~----~n~i~~~-----~~~~l~~l~~L~~L~l~~n~--l~~~~~~~~~~-l~~L~~L~l~~n~l~~~- 281 (707)
. +++|+.|+++ .|.+++. .+..+.++++|+.|++++|. +++.....+.. +++|+.|++++|.+++.
T Consensus 400 ~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~ 479 (592)
T 3ogk_B 400 TYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEG 479 (592)
T ss_dssp HHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHH
T ss_pred hhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHH
Confidence 5 8899999996 6777754 23336678999999997543 66555555544 78899999999998763
Q ss_pred CCcccccccccceEeccccccCCch-hHhhccCCCceeEeeccCccccc
Q 038671 282 MPSQICNMQSLEKLNLSHNNLSGFI-PSCFEELHGLSYIDISYNELHGS 329 (707)
Q Consensus 282 ~~~~~~~~~~L~~L~l~~n~i~~~~-~~~~~~~~~L~~l~l~~n~~~~~ 329 (707)
.+..+..+++|+.|++++|++++.. +..+..+++|+.|++++|+++..
T Consensus 480 ~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 480 LMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp HHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred HHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 3344567899999999999987553 34456789999999999997754
No 330
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.91 E-value=8e-26 Score=236.32 Aligned_cols=255 Identities=19% Similarity=0.166 Sum_probs=145.7
Q ss_pred eeeccCCeeeecCCccccCCCCCCeEECCCCccccccC----cCccCCC-CCcEEEcccCcCcccCCccccCC-----CC
Q 038671 7 FLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIP----HSLGNLT-QITFLTLFDNALSGAIPKEYGNL-----VK 76 (707)
Q Consensus 7 ~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~----~~~~~l~-~L~~L~L~~n~i~~~~~~~~~~l-----~~ 76 (707)
+++|++|++++.+|..+...++|++|+|++|.+++..+ +.|.+++ +|++|+|++|.|++..+..|..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 56788888888888777777778888888888886655 6777787 88888888888887777777765 77
Q ss_pred CCeeecccccccccCCC-----CCCC-CCccEEEeccCccccccCcccc----C-CCCCcEEEcccccccccCCC----C
Q 038671 77 LTLLTLENNQLRGPIPN-----LRNL-TSLVRVRLNQNHLTGNISESFG----I-HPNLAFIDLSHNYFYGEISS----D 141 (707)
Q Consensus 77 L~~L~l~~n~i~~~~~~-----l~~l-~~L~~L~l~~n~l~~~~~~~~~----~-~~~L~~L~L~~n~i~~~~~~----~ 141 (707)
|++|+|++|.++..... +..+ ++|++|++++|+++......+. . .++|++|+|++|.++..... .
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 88888888877754332 3344 5666667766666655443332 2 23556666666555532211 1
Q ss_pred CCCCC-CCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCC-CCCcEEEecCCccccCC----ccccC
Q 038671 142 WGRCP-KLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKL-SSLIKLILNSNQLCGQL----SLELG 215 (707)
Q Consensus 142 ~~~~~-~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l-~~L~~L~l~~n~l~~~~----~~~~~ 215 (707)
+..++ +|++|+|++|.+++..+..+.. .+..+ ++|++|+|++|.++... +..+.
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~--------------------~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~ 221 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAK--------------------FLASIPASVTSLDLSANLLGLKSYAELAYIFS 221 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHH--------------------HHHTSCTTCCEEECTTSCGGGSCHHHHHHHHH
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHH--------------------HHHhCCCCCCEEECCCCCCChhHHHHHHHHHh
Confidence 22222 4555555555554333322221 12222 24555555555544321 22222
Q ss_pred C-CCcccEEEccCCccCCCCC----ccccCcccCceEeeecccccccCch-------hhhhcccCCeeeecCccCCCC
Q 038671 216 S-LTQLERLDLSSNRLSNSIP----KSLGNLVKLHYLNLSNNQFIKKIPV-------ELEKLIHLSELDLSHNFLGEE 281 (707)
Q Consensus 216 ~-l~~L~~L~l~~n~i~~~~~----~~l~~l~~L~~L~l~~n~l~~~~~~-------~~~~l~~L~~L~l~~n~l~~~ 281 (707)
. .++|++|+|++|.+++..+ ..+..+++|+.|+|++|.+.+..+. .+..+++|+.|++++|.+.+.
T Consensus 222 ~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 222 SIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp HSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred cCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 2 2355555555555554333 2234445566666666654333222 234455666666666666544
No 331
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.91 E-value=7.4e-24 Score=207.75 Aligned_cols=207 Identities=19% Similarity=0.176 Sum_probs=170.1
Q ss_pred CCeeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCc-CcccCCccccCCCCCCeeeccc-ccccc
Q 038671 12 NNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNA-LSGAIPKEYGNLVKLTLLTLEN-NQLRG 89 (707)
Q Consensus 12 ~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~-i~~~~~~~~~~l~~L~~L~l~~-n~i~~ 89 (707)
.++++ .+|. +.. +|++|+|++|++++..+..|.++++|++|++++|. ++...+..|.++++|++|++++ |.++.
T Consensus 20 c~~l~-~ip~-~~~--~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~ 95 (239)
T 2xwt_C 20 CKDIQ-RIPS-LPP--STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTY 95 (239)
T ss_dssp ECSCS-SCCC-CCT--TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCE
T ss_pred ccCcc-ccCC-CCC--cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeE
Confidence 33355 5666 443 89999999999997777788899999999999996 8877777899999999999998 88888
Q ss_pred cCC-CCCCCCCccEEEeccCccccccCccccCCCCCc---EEEcccc-cccccCCCCCCCCCCCc-EEEcCCCccCCCCc
Q 038671 90 PIP-NLRNLTSLVRVRLNQNHLTGNISESFGIHPNLA---FIDLSHN-YFYGEISSDWGRCPKLG-TLDFSSNNITGSMP 163 (707)
Q Consensus 90 ~~~-~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~---~L~L~~n-~i~~~~~~~~~~~~~L~-~L~L~~n~i~~~~~ 163 (707)
+++ .|.++++|++|++++|+++.++. |..+++|+ +|++++| .++.+.+..|..+++|+ +|++++|.++....
T Consensus 96 i~~~~f~~l~~L~~L~l~~n~l~~lp~--~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~ 173 (239)
T 2xwt_C 96 IDPDALKELPLLKFLGIFNTGLKMFPD--LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQG 173 (239)
T ss_dssp ECTTSEECCTTCCEEEEEEECCCSCCC--CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECT
T ss_pred cCHHHhCCCCCCCEEeCCCCCCccccc--cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCH
Confidence 765 47888999999999999887654 78888888 9999999 89888888899999999 99999999885555
Q ss_pred hhhhCCCCCCEEeCCCCC-CCCCCChhhhCC-CCCcEEEecCCccccCCccccCCCCcccEEEccCC
Q 038671 164 AEIIHSSQLKVLDLSSNH-IVGEMPSKLGKL-SSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSN 228 (707)
Q Consensus 164 ~~~~~~~~L~~L~l~~n~-l~~~~~~~~~~l-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 228 (707)
..+.. ++|+.|++++|+ ++...+..|..+ ++|++|++++|+++...+. .+++|+.|+++++
T Consensus 174 ~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 174 YAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp TTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred hhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 55555 789999999995 886777888888 8999999999999854433 6788889988876
No 332
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=4.9e-25 Score=230.34 Aligned_cols=255 Identities=20% Similarity=0.197 Sum_probs=129.1
Q ss_pred EEEcccCcCcccCCccccCCCCCCeeecccccccccC-----CCCCCCC-CccEEEeccCccccccCccccCC-----CC
Q 038671 55 FLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRGPI-----PNLRNLT-SLVRVRLNQNHLTGNISESFGIH-----PN 123 (707)
Q Consensus 55 ~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~-----~~l~~l~-~L~~L~l~~n~l~~~~~~~~~~~-----~~ 123 (707)
.+.|++|.+++.+|..+...++|++|+|++|.++... ..+..++ +|++|+|++|+++...+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 4567778888777766666666888888888777654 2355566 67777777777766555555443 66
Q ss_pred CcEEEcccccccccCCCC----CCCC-CCCcEEEcCCCccCCCCchhhhC-----CCCCCEEeCCCCCCCCCCChh----
Q 038671 124 LAFIDLSHNYFYGEISSD----WGRC-PKLGTLDFSSNNITGSMPAEIIH-----SSQLKVLDLSSNHIVGEMPSK---- 189 (707)
Q Consensus 124 L~~L~L~~n~i~~~~~~~----~~~~-~~L~~L~L~~n~i~~~~~~~~~~-----~~~L~~L~l~~n~l~~~~~~~---- 189 (707)
|++|+|++|.++...+.. +..+ ++|++|+|++|.+++.....+.. .++|++|+|++|.+++.....
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 666666666665443332 2223 55566666666555444433322 235555555555554322222
Q ss_pred hhCCC-CCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccccCc-ccCceEeeecccccccCch----hhh
Q 038671 190 LGKLS-SLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNL-VKLHYLNLSNNQFIKKIPV----ELE 263 (707)
Q Consensus 190 ~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l-~~L~~L~l~~n~l~~~~~~----~~~ 263 (707)
+..++ +|++|++++|++++..+..+.. .+..+ ++|+.|+|++|.+++.... .+.
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~--------------------~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~ 221 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAK--------------------FLASIPASVTSLDLSANLLGLKSYAELAYIFS 221 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHH--------------------HHHTSCTTCCEEECTTSCGGGSCHHHHHHHHH
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHH--------------------HHHhCCCCCCEEECCCCCCChhHHHHHHHHHh
Confidence 22232 4555555555544333322211 11122 2455555555554442222 222
Q ss_pred h-cccCCeeeecCccCCCCCC----cccccccccceEeccccccCCchh-------HhhccCCCceeEeeccCccccc
Q 038671 264 K-LIHLSELDLSHNFLGEEMP----SQICNMQSLEKLNLSHNNLSGFIP-------SCFEELHGLSYIDISYNELHGS 329 (707)
Q Consensus 264 ~-l~~L~~L~l~~n~l~~~~~----~~~~~~~~L~~L~l~~n~i~~~~~-------~~~~~~~~L~~l~l~~n~~~~~ 329 (707)
. .++|++|+|++|.+++..+ ..+..+++|+.|++++|.+.+..+ ..+..+++|+.|++++|++...
T Consensus 222 ~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 222 SIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp HSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred cCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 2 2355555555555544322 122334555555555555333222 2344455566666666665543
No 333
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=1.1e-23 Score=206.55 Aligned_cols=178 Identities=20% Similarity=0.181 Sum_probs=77.2
Q ss_pred CccEEEeccCccccccCccccCCCCCcEEEccccc-ccccCCCCCCCCCCCcEEEcCC-CccCCCCchhhhCCCCCCEEe
Q 038671 99 SLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNY-FYGEISSDWGRCPKLGTLDFSS-NNITGSMPAEIIHSSQLKVLD 176 (707)
Q Consensus 99 ~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~-i~~~~~~~~~~~~~L~~L~L~~-n~i~~~~~~~~~~~~~L~~L~ 176 (707)
+|++|++++|+++.+++..|..+++|++|++++|. ++.+.+..|..+++|++|++++ |.++...+..|.++++|+.|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 34444444444444444444444444444444443 4433333444444444444444 444433333344444444444
Q ss_pred CCCCCCCCCCChhhhCCCCCc---EEEecCC-ccccCCccccCCCCccc-EEEccCCccCCCCCccccCcccCceEeeec
Q 038671 177 LSSNHIVGEMPSKLGKLSSLI---KLILNSN-QLCGQLSLELGSLTQLE-RLDLSSNRLSNSIPKSLGNLVKLHYLNLSN 251 (707)
Q Consensus 177 l~~n~l~~~~~~~~~~l~~L~---~L~l~~n-~l~~~~~~~~~~l~~L~-~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~ 251 (707)
+++|.+++ +|. |..+++|+ +|++++| .++...+..|..+++|+ +|++++|.++.+.+..|.. ++|+.|++++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~ 188 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNK 188 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTT
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCC
Confidence 44444432 222 33444444 4444444 44433334444444444 4555444444333333333 4455555555
Q ss_pred cc-ccccCchhhhhc-ccCCeeeecCccCC
Q 038671 252 NQ-FIKKIPVELEKL-IHLSELDLSHNFLG 279 (707)
Q Consensus 252 n~-l~~~~~~~~~~l-~~L~~L~l~~n~l~ 279 (707)
|+ +++..+..|.++ ++|+.|++++|.++
T Consensus 189 n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~ 218 (239)
T 2xwt_C 189 NKYLTVIDKDAFGGVYSGPSLLDVSQTSVT 218 (239)
T ss_dssp CTTCCEECTTTTTTCSBCCSEEECTTCCCC
T ss_pred CCCcccCCHHHhhccccCCcEEECCCCccc
Confidence 52 444444444444 44555555555443
No 334
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.90 E-value=5.3e-26 Score=240.25 Aligned_cols=263 Identities=21% Similarity=0.221 Sum_probs=153.3
Q ss_pred cCCccccCCCCCCeEECCCCccccccC----cCccCCCCCcEEEcccCcCc---ccCCccc-------cCCCCCCeeecc
Q 038671 18 SIPSEIGRLKSLSDLELSGNKLCGSIP----HSLGNLTQITFLTLFDNALS---GAIPKEY-------GNLVKLTLLTLE 83 (707)
Q Consensus 18 ~~~~~~~~l~~L~~L~l~~n~i~~~~~----~~~~~l~~L~~L~L~~n~i~---~~~~~~~-------~~l~~L~~L~l~ 83 (707)
.++..+..+++|++|+|++|++++..+ ..+.++++|++|+|++|.+. +.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 455566667777777777777765432 33566777777777775333 3333333 455555566655
Q ss_pred cccccc-----cCCCCCCCCCccEEEeccCccccccCccccCCCCCcEEEcccccccccCCCCCCCC---------CCCc
Q 038671 84 NNQLRG-----PIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRC---------PKLG 149 (707)
Q Consensus 84 ~n~i~~-----~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~---------~~L~ 149 (707)
+|.++. ++..+..+++|++|+|++|.++......+.. .+..+ ++|+
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~--------------------~l~~l~~~~~~~~~~~L~ 162 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIAR--------------------ALQELAVNKKAKNAPPLR 162 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHH--------------------HHHHHHHHHHHHTCCCCC
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHH--------------------HHHHHhhhhhcccCCCCc
Confidence 555543 2222344445555555555444322222211 11112 5666
Q ss_pred EEEcCCCccCCC-Cc---hhhhCCCCCCEEeCCCCCCCC-----CCChhhhCCCCCcEEEecCCccc----cCCccccCC
Q 038671 150 TLDFSSNNITGS-MP---AEIIHSSQLKVLDLSSNHIVG-----EMPSKLGKLSSLIKLILNSNQLC----GQLSLELGS 216 (707)
Q Consensus 150 ~L~L~~n~i~~~-~~---~~~~~~~~L~~L~l~~n~l~~-----~~~~~~~~l~~L~~L~l~~n~l~----~~~~~~~~~ 216 (707)
+|+|++|.++.. .+ ..+..+++|+.|+|++|.++. ..+..+..+++|++|+|++|.++ ...+..+..
T Consensus 163 ~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~ 242 (386)
T 2ca6_A 163 SIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKS 242 (386)
T ss_dssp EEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGG
T ss_pred EEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHcc
Confidence 666666666522 22 345566677777777777652 22335667777777777777775 345566777
Q ss_pred CCcccEEEccCCccCCC----CCcccc--CcccCceEeeecccccc----cCchhh-hhcccCCeeeecCccCCCCCC--
Q 038671 217 LTQLERLDLSSNRLSNS----IPKSLG--NLVKLHYLNLSNNQFIK----KIPVEL-EKLIHLSELDLSHNFLGEEMP-- 283 (707)
Q Consensus 217 l~~L~~L~l~~n~i~~~----~~~~l~--~l~~L~~L~l~~n~l~~----~~~~~~-~~l~~L~~L~l~~n~l~~~~~-- 283 (707)
+++|++|+|++|.+++. ++..+. .+++|+.|+|++|.+++ ..+..+ ..+++|+.|++++|.+++..+
T Consensus 243 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~~~ 322 (386)
T 2ca6_A 243 WPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDVV 322 (386)
T ss_dssp CTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSHHH
T ss_pred CCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchhHH
Confidence 77788888888877654 344453 37788888888888776 245555 557888888888888866542
Q ss_pred cccc-cccccceEecccc
Q 038671 284 SQIC-NMQSLEKLNLSHN 300 (707)
Q Consensus 284 ~~~~-~~~~L~~L~l~~n 300 (707)
..+. .++.++.+.+..+
T Consensus 323 ~~l~~~l~~~~~~~l~~~ 340 (386)
T 2ca6_A 323 DEIREVFSTRGRGELDEL 340 (386)
T ss_dssp HHHHHHHHHHTCCEECCC
T ss_pred HHHHHHhhhcCcchhhhc
Confidence 2222 2455555555443
No 335
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.90 E-value=9.6e-25 Score=226.18 Aligned_cols=223 Identities=19% Similarity=0.199 Sum_probs=134.5
Q ss_pred CCCcEEEcccCcCcccCCccccCC--CCCCeeecccccccccCCCCCCCCCccEEEeccCccccc-cCccccCCCCCcEE
Q 038671 51 TQITFLTLFDNALSGAIPKEYGNL--VKLTLLTLENNQLRGPIPNLRNLTSLVRVRLNQNHLTGN-ISESFGIHPNLAFI 127 (707)
Q Consensus 51 ~~L~~L~L~~n~i~~~~~~~~~~l--~~L~~L~l~~n~i~~~~~~l~~l~~L~~L~l~~n~l~~~-~~~~~~~~~~L~~L 127 (707)
..++.|++++|.+. +..+..+ ++++.|++++|.+....+.+..+++|++|++++|.++.. .+..+..+++|++|
T Consensus 47 ~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 47 SLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 34777888877766 4566666 778888888888877666667777888888887777644 44556677777777
Q ss_pred EcccccccccCCCCCCCCCCCcEEEcCCC-ccCCC-CchhhhCCCCCCEEeCCCC-CCCCC-CChhhhCCC-CCcEEEec
Q 038671 128 DLSHNYFYGEISSDWGRCPKLGTLDFSSN-NITGS-MPAEIIHSSQLKVLDLSSN-HIVGE-MPSKLGKLS-SLIKLILN 202 (707)
Q Consensus 128 ~L~~n~i~~~~~~~~~~~~~L~~L~L~~n-~i~~~-~~~~~~~~~~L~~L~l~~n-~l~~~-~~~~~~~l~-~L~~L~l~ 202 (707)
+|++|.+++..+..+..+++|++|+|++| .+++. .+..+..+++|+.|++++| .+++. .+..+..++ +|++|+++
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 77777776555556666777777777777 45532 3444556667777777776 66532 344555666 66666666
Q ss_pred CCc--cc-cCCccccCCCCcccEEEccCCc-cCCCCCccccCcccCceEeeeccc-ccccCchhhhhcccCCeeeecCc
Q 038671 203 SNQ--LC-GQLSLELGSLTQLERLDLSSNR-LSNSIPKSLGNLVKLHYLNLSNNQ-FIKKIPVELEKLIHLSELDLSHN 276 (707)
Q Consensus 203 ~n~--l~-~~~~~~~~~l~~L~~L~l~~n~-i~~~~~~~l~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~l~~n 276 (707)
+|. ++ ...+..+..+++|++|++++|. +++..+..+..+++|+.|++++|. +.......+..+++|+.|++++|
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 204 GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp SCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 663 33 2233344455555555555555 444444455555555555555552 22222223444444555555444
No 336
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.90 E-value=4.5e-24 Score=217.35 Aligned_cols=195 Identities=25% Similarity=0.353 Sum_probs=123.3
Q ss_pred cCCCCCcEEEcccCcCcccCCccccCCCCCCeeecccccccccCCCCCCCCCccEEEeccCccccccCccccCCCCCcEE
Q 038671 48 GNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRGPIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFI 127 (707)
Q Consensus 48 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L 127 (707)
.++++|++|++++|.++.. + .+..+++|++|++++|.+..+++ +..+++|++|++++|+++.+. .+..+++|++|
T Consensus 38 ~~l~~L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~~~~-~~~l~~L~~L~L~~n~l~~~~--~~~~l~~L~~L 112 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLAP-LKNLTKITELELSGNPLKNVS--AIAGLQSIKTL 112 (308)
T ss_dssp HHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG-GTTCCSCCEEECCSCCCSCCG--GGTTCTTCCEE
T ss_pred HHcCCcCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCCCChh-HccCCCCCEEEccCCcCCCch--hhcCCCCCCEE
Confidence 3455555555555555532 2 35555555555555555554444 555555555555555555442 45566666666
Q ss_pred EcccccccccCCCCCCCCCCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccc
Q 038671 128 DLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLC 207 (707)
Q Consensus 128 ~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 207 (707)
++++|.++.+. .+..+++|++|++++|.+++..+ +..+++|+.|++++|.+++..+ +..+++|++|++++|.++
T Consensus 113 ~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~ 186 (308)
T 1h6u_A 113 DLTSTQITDVT--PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKIS 186 (308)
T ss_dssp ECTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred ECCCCCCCCch--hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccC
Confidence 66666666542 26666777777777777664333 6667777777777777764322 677777777777777777
Q ss_pred cCCccccCCCCcccEEEccCCccCCCCCccccCcccCceEeeeccccccc
Q 038671 208 GQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKK 257 (707)
Q Consensus 208 ~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~ 257 (707)
+..+ +..+++|++|++++|.+++..+ +..+++|+.|++++|++++.
T Consensus 187 ~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~~ 232 (308)
T 1h6u_A 187 DISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQ 232 (308)
T ss_dssp CCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEECC
T ss_pred cChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeecC
Confidence 4433 6777888888888888875543 77788888888888887653
No 337
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.90 E-value=2.7e-25 Score=249.23 Aligned_cols=321 Identities=12% Similarity=0.048 Sum_probs=245.3
Q ss_pred CCCCceeeccCCeee----ecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCc---ccCCccccCC
Q 038671 2 LSNLAFLYLYNNSFS----GSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALS---GAIPKEYGNL 74 (707)
Q Consensus 2 l~~l~~L~l~~n~i~----~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~---~~~~~~~~~l 74 (707)
+++|++|++++|.++ +.++..+..+++|++|+|++|.+.+ ++..+.++++|++|+++..... ...+..+..+
T Consensus 191 ~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~ 269 (592)
T 3ogk_B 191 NTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFP 269 (592)
T ss_dssp CCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCC
T ss_pred CCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhcc
Confidence 689999999999997 3455566788999999999999984 6688999999999999864332 2334567888
Q ss_pred CCCCeeecccccccccCCCCCCCCCccEEEeccCccccccC-ccccCCCCCcEEEccccccc-ccCCCCCCCCCCCcEEE
Q 038671 75 VKLTLLTLENNQLRGPIPNLRNLTSLVRVRLNQNHLTGNIS-ESFGIHPNLAFIDLSHNYFY-GEISSDWGRCPKLGTLD 152 (707)
Q Consensus 75 ~~L~~L~l~~n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~~-~~~~~~~~L~~L~L~~n~i~-~~~~~~~~~~~~L~~L~ 152 (707)
++|+.|+++++....++..+..+++|++|++++|.++.... ..+..+++|++|+++ +.+. ...+..+..+++|++|+
T Consensus 270 ~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~ 348 (592)
T 3ogk_B 270 RKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLR 348 (592)
T ss_dssp TTCCEEEETTCCTTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEE
T ss_pred ccccccCccccchhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEE
Confidence 99999999987666666667889999999999999765443 346889999999999 4444 22333345789999999
Q ss_pred cCC-----------CccCCCCchh-hhCCCCCCEEeCCCCCCCCCCChhhhC-CCCCcEEEec----CCccccC-----C
Q 038671 153 FSS-----------NNITGSMPAE-IIHSSQLKVLDLSSNHIVGEMPSKLGK-LSSLIKLILN----SNQLCGQ-----L 210 (707)
Q Consensus 153 L~~-----------n~i~~~~~~~-~~~~~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~l~----~n~l~~~-----~ 210 (707)
|++ |.+++..... +..+++|+.|+++.|.+++..+..+.. +++|++|+++ .|.+++. .
T Consensus 349 L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~ 428 (592)
T 3ogk_B 349 IERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGV 428 (592)
T ss_dssp EECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHH
T ss_pred eecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHH
Confidence 993 5666433333 445899999999999998766666665 8999999996 6777743 2
Q ss_pred ccccCCCCcccEEEccCCc--cCCCCCccccC-cccCceEeeecccccccC-chhhhhcccCCeeeecCccCCCCC-Ccc
Q 038671 211 SLELGSLTQLERLDLSSNR--LSNSIPKSLGN-LVKLHYLNLSNNQFIKKI-PVELEKLIHLSELDLSHNFLGEEM-PSQ 285 (707)
Q Consensus 211 ~~~~~~l~~L~~L~l~~n~--i~~~~~~~l~~-l~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~~~~-~~~ 285 (707)
+..+..+++|++|+++.|. +++..+..++. +++|++|++++|++++.. +..+.++++|+.|+|++|.+++.. +..
T Consensus 429 ~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~ 508 (592)
T 3ogk_B 429 RSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAA 508 (592)
T ss_dssp HHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHH
T ss_pred HHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHH
Confidence 2336679999999998643 66555555543 789999999999987644 444578899999999999986543 333
Q ss_pred cccccccceEeccccccCCchhHhhc-cCCCceeEeeccC
Q 038671 286 ICNMQSLEKLNLSHNNLSGFIPSCFE-ELHGLSYIDISYN 324 (707)
Q Consensus 286 ~~~~~~L~~L~l~~n~i~~~~~~~~~-~~~~L~~l~l~~n 324 (707)
...+++|+.|++++|++++.....+. .++.+....+..+
T Consensus 509 ~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 509 VTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp HHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred HHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 45789999999999999876444443 5677777666654
No 338
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.90 E-value=3.5e-23 Score=210.79 Aligned_cols=208 Identities=23% Similarity=0.285 Sum_probs=133.4
Q ss_pred EEcccCcCcccCCccccCCCCCCeeecccccccccCCCCCCCCCccEEEeccCccccccCccccCCCCCcEEEccccccc
Q 038671 56 LTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRGPIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFY 135 (707)
Q Consensus 56 L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~ 135 (707)
+.+..+.+.+.. .+..+++|++|++++|.+..++ ++..+++|++|++++|+++.+.+ +..+++|++|+|++|.++
T Consensus 24 ~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~ 98 (308)
T 1h6u_A 24 IAAGKSNVTDTV--TQADLDGITTLSAFGTGVTTIE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLK 98 (308)
T ss_dssp HHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCS
T ss_pred HHhCCCCcCcee--cHHHcCCcCEEEeeCCCccCch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCC
Confidence 344455554322 2445667777777777776543 56667777777777777766554 666777777777777776
Q ss_pred ccCCCCCCCCCCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccC
Q 038671 136 GEISSDWGRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELG 215 (707)
Q Consensus 136 ~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 215 (707)
.+ ..+..+++|++|+|++|.+++.. .+..+++|+.|++++|.+++..+ +..+++|++|++++|.+++..+ +.
T Consensus 99 ~~--~~~~~l~~L~~L~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~ 170 (308)
T 1h6u_A 99 NV--SAIAGLQSIKTLDLTSTQITDVT--PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LA 170 (308)
T ss_dssp CC--GGGTTCTTCCEEECTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GT
T ss_pred Cc--hhhcCCCCCCEEECCCCCCCCch--hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hc
Confidence 54 25666777777777777776432 26667777777777777764322 6666777777777777764333 66
Q ss_pred CCCcccEEEccCCccCCCCCccccCcccCceEeeecccccccCchhhhhcccCCeeeecCccCCC
Q 038671 216 SLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGE 280 (707)
Q Consensus 216 ~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 280 (707)
.+++|+.|++++|.+++..+ +..+++|+.|++++|++.+.. .+..+++|+.|++++|.+++
T Consensus 171 ~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 171 NLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp TCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC
T ss_pred CCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeec
Confidence 67777777777777765443 666677777777777765544 26666777777777777643
No 339
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.90 E-value=1.1e-25 Score=252.54 Aligned_cols=322 Identities=15% Similarity=0.136 Sum_probs=145.5
Q ss_pred CCCCceeeccCCeeeecCCcccc-CCCCCCeEECCCC-ccccc-cCcCccCCCCCcEEEcccCcCcccCCcccc----CC
Q 038671 2 LSNLAFLYLYNNSFSGSIPSEIG-RLKSLSDLELSGN-KLCGS-IPHSLGNLTQITFLTLFDNALSGAIPKEYG----NL 74 (707)
Q Consensus 2 l~~l~~L~l~~n~i~~~~~~~~~-~l~~L~~L~l~~n-~i~~~-~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~----~l 74 (707)
+++|++|+|++|.+++..+..+. .+++|++|+|++| .+++. ++..+.++++|++|+|++|.+++..+..+. .+
T Consensus 104 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~ 183 (594)
T 2p1m_B 104 YTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTY 183 (594)
T ss_dssp CTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTC
T ss_pred CCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcC
Confidence 35666777777666665555554 4667777777766 44432 223334566777777777666654444443 44
Q ss_pred CCCCeeeccccc--ccc--cCCCCCCCCCccEEEeccC-ccccccCccccCCCCCcEEEccccc----------------
Q 038671 75 VKLTLLTLENNQ--LRG--PIPNLRNLTSLVRVRLNQN-HLTGNISESFGIHPNLAFIDLSHNY---------------- 133 (707)
Q Consensus 75 ~~L~~L~l~~n~--i~~--~~~~l~~l~~L~~L~l~~n-~l~~~~~~~~~~~~~L~~L~L~~n~---------------- 133 (707)
++|++|++++|. +.. +..-+..+++|++|++++| .+++ .+..+..+++|++|+++.+.
T Consensus 184 ~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~ 262 (594)
T 2p1m_B 184 TSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALS 262 (594)
T ss_dssp CCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHH
T ss_pred CcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHHHHh
Confidence 467777776665 110 0000233466666666665 2222 22233334444444433221
Q ss_pred ----------cccc----CCCCCCCCCCCcEEEcCCCccCCCCch-hhhCCCCCCEEeCCCCCCCCC-CChhhhCCCCCc
Q 038671 134 ----------FYGE----ISSDWGRCPKLGTLDFSSNNITGSMPA-EIIHSSQLKVLDLSSNHIVGE-MPSKLGKLSSLI 197 (707)
Q Consensus 134 ----------i~~~----~~~~~~~~~~L~~L~L~~n~i~~~~~~-~~~~~~~L~~L~l~~n~l~~~-~~~~~~~l~~L~ 197 (707)
+... .+..+..+++|++|+|++|.+++.... .+..+++|+.|++++| +.+. .+.....+++|+
T Consensus 263 ~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~ 341 (594)
T 2p1m_B 263 GCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLR 341 (594)
T ss_dssp TCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCC
T ss_pred cCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCC
Confidence 0000 011111346666666666665432211 2335566666666655 3211 111122355555
Q ss_pred EEEecC---------CccccCCccccC-CCCcccEEEccCCccCCCCCcccc-CcccCceEeee--c----ccccccC--
Q 038671 198 KLILNS---------NQLCGQLSLELG-SLTQLERLDLSSNRLSNSIPKSLG-NLVKLHYLNLS--N----NQFIKKI-- 258 (707)
Q Consensus 198 ~L~l~~---------n~l~~~~~~~~~-~l~~L~~L~l~~n~i~~~~~~~l~-~l~~L~~L~l~--~----n~l~~~~-- 258 (707)
+|++.+ +.++......+. .+++|+.|.++.|.+++.....+. .+++|+.|+++ + |.+++..
T Consensus 342 ~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~ 421 (594)
T 2p1m_B 342 ELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLD 421 (594)
T ss_dssp EEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTH
T ss_pred EEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchh
Confidence 555522 233322111221 245555555555555433333332 24555555555 2 2332111
Q ss_pred ---chhhhhcccCCeeeecCccCCCCCCccccc-ccccceEeccccccCCchhHhh-ccCCCceeEeeccCcc
Q 038671 259 ---PVELEKLIHLSELDLSHNFLGEEMPSQICN-MQSLEKLNLSHNNLSGFIPSCF-EELHGLSYIDISYNEL 326 (707)
Q Consensus 259 ---~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-~~~L~~L~l~~n~i~~~~~~~~-~~~~~L~~l~l~~n~~ 326 (707)
+..+..+++|+.|++++ .+++.....+.. +++|+.|++++|.+++.....+ ..+++|+.|++++|++
T Consensus 422 ~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~ 493 (594)
T 2p1m_B 422 IGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPF 493 (594)
T ss_dssp HHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSC
T ss_pred hHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCC
Confidence 11133444455555544 333322222322 4445555555554443333322 3344555555555544
No 340
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=3.8e-25 Score=233.66 Aligned_cols=188 Identities=21% Similarity=0.318 Sum_probs=116.5
Q ss_pred CCCCCCcEEEcCCCccCCC----CchhhhCCCCCCEEeCCCCCCCCCCChhhh----CC---------CCCcEEEecCCc
Q 038671 143 GRCPKLGTLDFSSNNITGS----MPAEIIHSSQLKVLDLSSNHIVGEMPSKLG----KL---------SSLIKLILNSNQ 205 (707)
Q Consensus 143 ~~~~~L~~L~L~~n~i~~~----~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~----~l---------~~L~~L~l~~n~ 205 (707)
..+++|++|+|++|.++.. .+..+..+++|++|+|++|.++...+..+. .+ ++|++|++++|+
T Consensus 91 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~ 170 (386)
T 2ca6_A 91 LKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNR 170 (386)
T ss_dssp TTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSC
T ss_pred hhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCC
Confidence 4556666666666666642 344555666666666666666533222222 22 667777777777
Q ss_pred ccc-CCc---cccCCCCcccEEEccCCccCC-----CCCccccCcccCceEeeeccccc----ccCchhhhhcccCCeee
Q 038671 206 LCG-QLS---LELGSLTQLERLDLSSNRLSN-----SIPKSLGNLVKLHYLNLSNNQFI----KKIPVELEKLIHLSELD 272 (707)
Q Consensus 206 l~~-~~~---~~~~~l~~L~~L~l~~n~i~~-----~~~~~l~~l~~L~~L~l~~n~l~----~~~~~~~~~l~~L~~L~ 272 (707)
++. ..+ ..+..+++|++|+|++|.++. ..+..+..+++|+.|+|++|.++ ...+..+..+++|+.|+
T Consensus 171 l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~ 250 (386)
T 2ca6_A 171 LENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELG 250 (386)
T ss_dssp CTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEE
T ss_pred CCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEE
Confidence 652 222 245566677777777776652 23335666777777777777765 33455666777777777
Q ss_pred ecCccCCCC----CCcccc--cccccceEeccccccCC----chhHhh-ccCCCceeEeeccCcccccC
Q 038671 273 LSHNFLGEE----MPSQIC--NMQSLEKLNLSHNNLSG----FIPSCF-EELHGLSYIDISYNELHGSI 330 (707)
Q Consensus 273 l~~n~l~~~----~~~~~~--~~~~L~~L~l~~n~i~~----~~~~~~-~~~~~L~~l~l~~n~~~~~~ 330 (707)
|++|.+++. ++..+. .+++|+.|++++|++++ .++..+ ..+++|+.|++++|++++..
T Consensus 251 L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 251 LNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp CTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred CCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 777777554 233442 26777888888887776 355555 45778888888888777554
No 341
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=3.2e-23 Score=211.72 Aligned_cols=223 Identities=21% Similarity=0.185 Sum_probs=138.0
Q ss_pred CCcEEEcccCcCcccCCc---cccCCCCCCeeecccccccccCC-CC--CCCCCccEEEeccCccccccC----ccccCC
Q 038671 52 QITFLTLFDNALSGAIPK---EYGNLVKLTLLTLENNQLRGPIP-NL--RNLTSLVRVRLNQNHLTGNIS----ESFGIH 121 (707)
Q Consensus 52 ~L~~L~L~~n~i~~~~~~---~~~~l~~L~~L~l~~n~i~~~~~-~l--~~l~~L~~L~l~~n~l~~~~~----~~~~~~ 121 (707)
.++.|.+.++.++..... .+..+++|++|++++|.+....+ .+ ..+++|++|++++|.++...+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 355666666555421110 11123456666666666654333 33 566666666666666664322 233456
Q ss_pred CCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccCCC----CchhhhCCCCCCEEeCCCCCCCCCCCh----hhhCC
Q 038671 122 PNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGS----MPAEIIHSSQLKVLDLSSNHIVGEMPS----KLGKL 193 (707)
Q Consensus 122 ~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~----~~~~~~~~~~L~~L~l~~n~l~~~~~~----~~~~l 193 (707)
++|++|+|++|.++.+.+..|..+++|++|+|++|.+.+. ....+..+++|++|+|++|+++ ..+. .+..+
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcC
Confidence 6777777777777666666677777777777777765421 1122345677777777777775 2222 24566
Q ss_pred CCCcEEEecCCccccCCccccCCC---CcccEEEccCCccCCCCCccccCcccCceEeeecccccccCchhhhhcccCCe
Q 038671 194 SSLIKLILNSNQLCGQLSLELGSL---TQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSE 270 (707)
Q Consensus 194 ~~L~~L~l~~n~l~~~~~~~~~~l---~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 270 (707)
++|++|++++|.+++..|..+..+ ++|++|+|++|+++ .+|..+. ++|+.|+|++|++++.. . +..+++|+.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~~-~-~~~l~~L~~ 298 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRAP-Q-PDELPEVDN 298 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSCC-C-TTSCCCCSC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCCc-h-hhhCCCccE
Confidence 777777777777776656555555 57888888888887 4455553 67888888888876542 2 566778888
Q ss_pred eeecCccCCC
Q 038671 271 LDLSHNFLGE 280 (707)
Q Consensus 271 L~l~~n~l~~ 280 (707)
|++++|++++
T Consensus 299 L~L~~N~l~~ 308 (310)
T 4glp_A 299 LTLDGNPFLV 308 (310)
T ss_dssp EECSSTTTSC
T ss_pred EECcCCCCCC
Confidence 8888888754
No 342
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=2.4e-24 Score=223.17 Aligned_cols=253 Identities=19% Similarity=0.243 Sum_probs=189.0
Q ss_pred CCCeEECCCCccccccCcCccCC--CCCcEEEcccCcCcccCCccccCCCCCCeeecccccccc--cCCCCCCCCCccEE
Q 038671 28 SLSDLELSGNKLCGSIPHSLGNL--TQITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRG--PIPNLRNLTSLVRV 103 (707)
Q Consensus 28 ~L~~L~l~~n~i~~~~~~~~~~l--~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~--~~~~l~~l~~L~~L 103 (707)
.++.|+++++.+. +..+..+ ++++.|++++|.+.+..+. +..+++|++|++++|.+.. ++..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 4677777777766 3445555 7778888888877765544 4567788888888887764 33346777888888
Q ss_pred EeccCccccccCccccCCCCCcEEEcccc-ccccc-CCCCCCCCCCCcEEEcCCC-ccCCC-CchhhhCCC-CCCEEeCC
Q 038671 104 RLNQNHLTGNISESFGIHPNLAFIDLSHN-YFYGE-ISSDWGRCPKLGTLDFSSN-NITGS-MPAEIIHSS-QLKVLDLS 178 (707)
Q Consensus 104 ~l~~n~l~~~~~~~~~~~~~L~~L~L~~n-~i~~~-~~~~~~~~~~L~~L~L~~n-~i~~~-~~~~~~~~~-~L~~L~l~ 178 (707)
++++|+++...+..++.+++|++|+|++| .+++. .+..+..+++|++|++++| .+++. .+..+..++ +|++|+++
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 88888877666677778888888888888 56642 3445677888999999998 88754 456677788 99999999
Q ss_pred CC--CCC-CCCChhhhCCCCCcEEEecCCc-cccCCccccCCCCcccEEEccCCc-cCCCCCccccCcccCceEeeeccc
Q 038671 179 SN--HIV-GEMPSKLGKLSSLIKLILNSNQ-LCGQLSLELGSLTQLERLDLSSNR-LSNSIPKSLGNLVKLHYLNLSNNQ 253 (707)
Q Consensus 179 ~n--~l~-~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~l~~n~-i~~~~~~~l~~l~~L~~L~l~~n~ 253 (707)
+| .++ ..++..+..+++|++|++++|. +++..+..+..+++|++|++++|. +.......++++++|+.|++++|
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~- 282 (336)
T 2ast_B 204 GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI- 282 (336)
T ss_dssp SCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-
T ss_pred CCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-
Confidence 99 454 3456677889999999999999 776777788899999999999995 33333336888999999999999
Q ss_pred ccccCchhhhhc-ccCCeeeecCccCCCCCCccccc
Q 038671 254 FIKKIPVELEKL-IHLSELDLSHNFLGEEMPSQICN 288 (707)
Q Consensus 254 l~~~~~~~~~~l-~~L~~L~l~~n~l~~~~~~~~~~ 288 (707)
+.... +..+ .++..|++++|.+++..|..++.
T Consensus 283 i~~~~---~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 283 VPDGT---LQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp SCTTC---HHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred cCHHH---HHHHHhhCcceEEecccCccccCCcccc
Confidence 54433 3344 35888889999998888877654
No 343
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=3.4e-22 Score=197.32 Aligned_cols=177 Identities=24% Similarity=0.255 Sum_probs=93.9
Q ss_pred CceeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeeccc
Q 038671 5 LAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLEN 84 (707)
Q Consensus 5 l~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~ 84 (707)
.++++++++.++ .+|..+. ++|+.|+|++|++++..+..|.++++|++|+|++|.|++..+..|.++++|++|+|++
T Consensus 16 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 92 (251)
T 3m19_A 16 KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLAN 92 (251)
T ss_dssp GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCC
Confidence 345555555555 4444443 3555555555555555555555555555555555555555555555555555555555
Q ss_pred ccccccCCCCCCCCCccEEEeccCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccCCCCch
Q 038671 85 NQLRGPIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGSMPA 164 (707)
Q Consensus 85 n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~ 164 (707)
|.++. +.+..|..+++|++|+|++|.++.+.+..|..+++|++|+|++|.+++..+.
T Consensus 93 n~l~~-----------------------~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 149 (251)
T 3m19_A 93 NQLAS-----------------------LPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAG 149 (251)
T ss_dssp SCCCC-----------------------CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred Ccccc-----------------------cChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHH
Confidence 55554 4444444445555555555555544444445555555555555555544444
Q ss_pred hhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccc
Q 038671 165 EIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLC 207 (707)
Q Consensus 165 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 207 (707)
.|..+++|+.|+|++|++++..+..|..+++|++|++++|.+.
T Consensus 150 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 192 (251)
T 3m19_A 150 AFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFD 192 (251)
T ss_dssp TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred HcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCcee
Confidence 4555555555555555555444445555555555555555554
No 344
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=3.4e-23 Score=211.45 Aligned_cols=224 Identities=17% Similarity=0.161 Sum_probs=176.4
Q ss_pred CCceeeccCCeeeecCCc---cccCCCCCCeEECCCCccccccCcCc--cCCCCCcEEEcccCcCcccCC----ccccCC
Q 038671 4 NLAFLYLYNNSFSGSIPS---EIGRLKSLSDLELSGNKLCGSIPHSL--GNLTQITFLTLFDNALSGAIP----KEYGNL 74 (707)
Q Consensus 4 ~l~~L~l~~n~i~~~~~~---~~~~l~~L~~L~l~~n~i~~~~~~~~--~~l~~L~~L~L~~n~i~~~~~----~~~~~l 74 (707)
.++.|.+.++.++...-. .+..+++|++|+|++|++++..|..+ .++++|++|+|++|.+++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 467788888777632111 12234679999999999998888887 889999999999999986554 445678
Q ss_pred CCCCeeecccccccccCC-CCCCCCCccEEEeccCcccc---cc-CccccCCCCCcEEEcccccccccCCC---CCCCCC
Q 038671 75 VKLTLLTLENNQLRGPIP-NLRNLTSLVRVRLNQNHLTG---NI-SESFGIHPNLAFIDLSHNYFYGEISS---DWGRCP 146 (707)
Q Consensus 75 ~~L~~L~l~~n~i~~~~~-~l~~l~~L~~L~l~~n~l~~---~~-~~~~~~~~~L~~L~L~~n~i~~~~~~---~~~~~~ 146 (707)
++|++|+|++|.+...++ .+..+++|++|+|++|++.+ +. ...+..+++|++|+|++|.++.+... .+..++
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~ 224 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGV 224 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTC
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCC
Confidence 899999999999987765 58899999999999998764 22 23346789999999999999743221 246789
Q ss_pred CCcEEEcCCCccCCCCchhhhCC---CCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEE
Q 038671 147 KLGTLDFSSNNITGSMPAEIIHS---SQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERL 223 (707)
Q Consensus 147 ~L~~L~L~~n~i~~~~~~~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 223 (707)
+|++|+|++|.+++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|++|++++|++++. +. +..+++|+.|
T Consensus 225 ~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L 299 (310)
T 4glp_A 225 QPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNL 299 (310)
T ss_dssp CCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCE
T ss_pred CCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEE
Confidence 99999999999997767666665 69999999999998 5666664 7999999999999954 33 6788999999
Q ss_pred EccCCccCC
Q 038671 224 DLSSNRLSN 232 (707)
Q Consensus 224 ~l~~n~i~~ 232 (707)
+|++|++++
T Consensus 300 ~L~~N~l~~ 308 (310)
T 4glp_A 300 TLDGNPFLV 308 (310)
T ss_dssp ECSSTTTSC
T ss_pred ECcCCCCCC
Confidence 999999874
No 345
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=4.8e-22 Score=196.27 Aligned_cols=177 Identities=22% Similarity=0.253 Sum_probs=86.6
Q ss_pred CCeeecccccccccCCCCCCCCCccEEEeccCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCC
Q 038671 77 LTLLTLENNQLRGPIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSN 156 (707)
Q Consensus 77 L~~L~l~~n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n 156 (707)
.++++++++.++.++..+. ++|+.|++++|+++.+.+..|..+++|++|+|++|.++.+.+..|..+++|++|+|++|
T Consensus 16 ~~~l~~~~~~l~~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 93 (251)
T 3m19_A 16 KKEVDCQGKSLDSVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANN 93 (251)
T ss_dssp GTEEECTTCCCSSCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred CeEEecCCCCccccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCC
Confidence 3444555555444444332 34445555555554444444444444555555544444444444444444444444444
Q ss_pred ccCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCc
Q 038671 157 NITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPK 236 (707)
Q Consensus 157 ~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~ 236 (707)
.++...+ ..|..+++|++|++++|++++..+..|..+++|++|+|++|.+++..+.
T Consensus 94 ~l~~~~~------------------------~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 149 (251)
T 3m19_A 94 QLASLPL------------------------GVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAG 149 (251)
T ss_dssp CCCCCCT------------------------TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred cccccCh------------------------hHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHH
Confidence 4443333 4444444444444444444433344444455555555555555544444
Q ss_pred cccCcccCceEeeecccccccCchhhhhcccCCeeeecCccCC
Q 038671 237 SLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLG 279 (707)
Q Consensus 237 ~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 279 (707)
.|.++++|+.|+|++|++++..+..+..+++|+.|++++|.++
T Consensus 150 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 192 (251)
T 3m19_A 150 AFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFD 192 (251)
T ss_dssp TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred HcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCcee
Confidence 4555555555555555555444445555555555555555553
No 346
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.88 E-value=5.9e-23 Score=205.43 Aligned_cols=155 Identities=16% Similarity=0.144 Sum_probs=122.1
Q ss_pred HHHHHHhcCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchh---------------hhHHHHHHHHHHHhcCC
Q 038671 429 EEIIRVTNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEM---------------ASQQEFLNEVKTLTGIR 493 (707)
Q Consensus 429 ~~~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~---------------~~~~~~~~e~~~l~~l~ 493 (707)
.........|++.+.||+|+||.||+|...+|+.||+|++........ .....+.+|++++++++
T Consensus 83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~ 162 (282)
T 1zar_A 83 HRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ 162 (282)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence 334445566778899999999999999778899999999864321110 23567899999999998
Q ss_pred CCceeeeeeeeecCCceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCee
Q 038671 494 HRNIVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVL 573 (707)
Q Consensus 494 h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil 573 (707)
| +++.+++.. +..++||||++|++|.+ +.. .....++.|++.||+|||+. ||+||||||+||+
T Consensus 163 --~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NIL 225 (282)
T 1zar_A 163 --G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVL 225 (282)
T ss_dssp --T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEE
T ss_pred --C-CCcCeEEec-cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEE
Confidence 4 666665543 56799999999999987 421 23457999999999999999 9999999999999
Q ss_pred ecCCCCeEEeccccceecCCCCCCccccccccCCCCccccc
Q 038671 574 LDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAY 614 (707)
Q Consensus 574 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~ 614 (707)
++ ++.+||+|||+++. +..+.|||.+.
T Consensus 226 l~-~~~vkl~DFG~a~~-------------~~~~~a~e~l~ 252 (282)
T 1zar_A 226 VS-EEGIWIIDFPQSVE-------------VGEEGWREILE 252 (282)
T ss_dssp EE-TTEEEECCCTTCEE-------------TTSTTHHHHHH
T ss_pred EE-CCcEEEEECCCCeE-------------CCCCCHHHHHH
Confidence 99 99999999999964 33467888765
No 347
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.88 E-value=2.4e-22 Score=208.73 Aligned_cols=200 Identities=15% Similarity=0.113 Sum_probs=111.5
Q ss_pred ceeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcc-cCCccccCCCCCCe-eecc
Q 038671 6 AFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSG-AIPKEYGNLVKLTL-LTLE 83 (707)
Q Consensus 6 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~-L~l~ 83 (707)
+.++.++++++ .+|..+. +++++|+|++|+|+.+.+++|.++++|++|+|++|+|.+ ..+.+|.++++|++ +.+.
T Consensus 12 ~~v~C~~~~Lt-~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 34566666666 5565552 466777777777764444566667777777777766643 33345666666554 3444
Q ss_pred cccccccCC-CCCCCCCccEEEeccCccccccCccccCCCCCcEEEccc-ccccccCCCCCCCCC-CCcEEEcCCCccCC
Q 038671 84 NNQLRGPIP-NLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSH-NYFYGEISSDWGRCP-KLGTLDFSSNNITG 160 (707)
Q Consensus 84 ~n~i~~~~~-~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~-n~i~~~~~~~~~~~~-~L~~L~L~~n~i~~ 160 (707)
.|++..+++ .|..+++|++|++++|+++.+.+..+....++..|++.+ +.+..+....|..++ .++.|+|++|.|+.
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~ 168 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE 168 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC
Confidence 566665544 356666666666666666655555555555566666643 455555555555543 35556666666553
Q ss_pred CCchhhhCCCCCCEEeCCC-CCCCCCCChhhhCCCCCcEEEecCCccccC
Q 038671 161 SMPAEIIHSSQLKVLDLSS-NHIVGEMPSKLGKLSSLIKLILNSNQLCGQ 209 (707)
Q Consensus 161 ~~~~~~~~~~~L~~L~l~~-n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 209 (707)
+.+..| ...+|+.|++.+ |.++...++.|..+++|++|++++|+|+..
T Consensus 169 i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~l 217 (350)
T 4ay9_X 169 IHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSL 217 (350)
T ss_dssp ECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCC
T ss_pred CChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCcc
Confidence 333322 234555555543 444433334455555555555555555533
No 348
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.88 E-value=4.4e-22 Score=206.78 Aligned_cols=240 Identities=23% Similarity=0.147 Sum_probs=194.6
Q ss_pred CeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeecccccccc-cCC-CCCCCCCccE-EEec
Q 038671 30 SDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRG-PIP-NLRNLTSLVR-VRLN 106 (707)
Q Consensus 30 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~-~~~-~l~~l~~L~~-L~l~ 106 (707)
+.++.++++++ .+|..+ .+++++|+|++|+|+.+.+++|+++++|++|+|++|++.+ +++ .|.++++|.+ +.+.
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 56788899999 777766 4689999999999998877899999999999999999865 443 4788988775 6667
Q ss_pred cCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCC-CccCCCCchhhhCCC-CCCEEeCCCCCCCC
Q 038671 107 QNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSS-NNITGSMPAEIIHSS-QLKVLDLSSNHIVG 184 (707)
Q Consensus 107 ~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~-n~i~~~~~~~~~~~~-~L~~L~l~~n~l~~ 184 (707)
.|+++.+.++.|..+++|++|++++|.++.+.+..+....++..|++.+ +.+.......|..+. .++.|+|++|+|+.
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~ 168 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE 168 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC
Confidence 7999999999999999999999999999988888888888899999965 667766667777764 68999999999984
Q ss_pred CCChhhhCCCCCcEEEec-CCccccCCccccCCCCcccEEEccCCccCCCCCccccCcccCceEeeecccccccCchhhh
Q 038671 185 EMPSKLGKLSSLIKLILN-SNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPVELE 263 (707)
Q Consensus 185 ~~~~~~~~l~~L~~L~l~-~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~ 263 (707)
..+. ....++|++|.+. +|.++...+..|..+++|++|+|++|+|+.+.+..|.++++|+.+++.+ + +..| .+.
T Consensus 169 i~~~-~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~~~--l-~~lP-~l~ 243 (350)
T 4ay9_X 169 IHNS-AFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYN--L-KKLP-TLE 243 (350)
T ss_dssp ECTT-SSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTCTT--C-CCCC-CTT
T ss_pred CChh-hccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccCCC--c-CcCC-Cch
Confidence 4444 4456789999997 4788866667889999999999999999977777776666655555432 3 3344 478
Q ss_pred hcccCCeeeecCcc
Q 038671 264 KLIHLSELDLSHNF 277 (707)
Q Consensus 264 ~l~~L~~L~l~~n~ 277 (707)
.+++|+.++++++.
T Consensus 244 ~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 244 KLVALMEASLTYPS 257 (350)
T ss_dssp TCCSCCEEECSCHH
T ss_pred hCcChhhCcCCCCc
Confidence 88999999998754
No 349
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.86 E-value=2.1e-23 Score=233.91 Aligned_cols=323 Identities=15% Similarity=0.123 Sum_probs=225.6
Q ss_pred CCCCceeeccCC-eeeec-CCccccCCCCCCeEECCCCccccccCcCc----cCCCCCcEEEcccCcCcccCCcc----c
Q 038671 2 LSNLAFLYLYNN-SFSGS-IPSEIGRLKSLSDLELSGNKLCGSIPHSL----GNLTQITFLTLFDNALSGAIPKE----Y 71 (707)
Q Consensus 2 l~~l~~L~l~~n-~i~~~-~~~~~~~l~~L~~L~l~~n~i~~~~~~~~----~~l~~L~~L~L~~n~i~~~~~~~----~ 71 (707)
+++|++|+|++| .+++. ++..+..+++|++|+|++|.+++..+..+ ..+++|++|++++|. ....... +
T Consensus 129 ~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~-~~~~~~~l~~l~ 207 (594)
T 2p1m_B 129 FKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLA-SEVSFSALERLV 207 (594)
T ss_dssp CTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCC-SCCCHHHHHHHH
T ss_pred CCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccC-CcCCHHHHHHHH
Confidence 678999999998 66643 34444578999999999998876544433 366789999999887 2122222 3
Q ss_pred cCCCCCCeeecccc-cccccCCCCCCCCCccEEEeccCc--------------------------cccc----cCccccC
Q 038671 72 GNLVKLTLLTLENN-QLRGPIPNLRNLTSLVRVRLNQNH--------------------------LTGN----ISESFGI 120 (707)
Q Consensus 72 ~~l~~L~~L~l~~n-~i~~~~~~l~~l~~L~~L~l~~n~--------------------------l~~~----~~~~~~~ 120 (707)
..+++|++|++++| .+..++..+..+++|++|++..+. +... .+..+..
T Consensus 208 ~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~~ 287 (594)
T 2p1m_B 208 TRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSV 287 (594)
T ss_dssp HHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGGGHHH
T ss_pred HhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHHHHHh
Confidence 45689999999887 444433335556667777654431 1111 1222336
Q ss_pred CCCCcEEEcccccccccC-CCCCCCCCCCcEEEcCCCccCCCCchhh-hCCCCCCEEeCC---------CCCCCCCCChh
Q 038671 121 HPNLAFIDLSHNYFYGEI-SSDWGRCPKLGTLDFSSNNITGSMPAEI-IHSSQLKVLDLS---------SNHIVGEMPSK 189 (707)
Q Consensus 121 ~~~L~~L~L~~n~i~~~~-~~~~~~~~~L~~L~L~~n~i~~~~~~~~-~~~~~L~~L~l~---------~n~l~~~~~~~ 189 (707)
+++|++|+|++|.++... ...+..+++|++|++++| +++.....+ ..+++|+.|++. .+.+++.....
T Consensus 288 ~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~ 366 (594)
T 2p1m_B 288 CSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVS 366 (594)
T ss_dssp HTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHH
T ss_pred hCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHH
Confidence 799999999999976432 223568899999999988 543322223 348999999983 34555333333
Q ss_pred hh-CCCCCcEEEecCCccccCCccccC-CCCcccEEEcc--C----CccCCCCC-----ccccCcccCceEeeecccccc
Q 038671 190 LG-KLSSLIKLILNSNQLCGQLSLELG-SLTQLERLDLS--S----NRLSNSIP-----KSLGNLVKLHYLNLSNNQFIK 256 (707)
Q Consensus 190 ~~-~l~~L~~L~l~~n~l~~~~~~~~~-~l~~L~~L~l~--~----n~i~~~~~-----~~l~~l~~L~~L~l~~n~l~~ 256 (707)
+. .+++|++|.++.|.+++.....+. .+++|+.|+++ + |.+++... ..+..+++|+.|+|++ .+++
T Consensus 367 l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~ 445 (594)
T 2p1m_B 367 VSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTD 445 (594)
T ss_dssp HHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCH
T ss_pred HHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccH
Confidence 33 489999999999999866555554 58999999999 4 56663221 1256788999999987 6666
Q ss_pred cCchhhhh-cccCCeeeecCccCCCCCCccc-ccccccceEeccccccCCchhH-hhccCCCceeEeeccCccc
Q 038671 257 KIPVELEK-LIHLSELDLSHNFLGEEMPSQI-CNMQSLEKLNLSHNNLSGFIPS-CFEELHGLSYIDISYNELH 327 (707)
Q Consensus 257 ~~~~~~~~-l~~L~~L~l~~n~l~~~~~~~~-~~~~~L~~L~l~~n~i~~~~~~-~~~~~~~L~~l~l~~n~~~ 327 (707)
.....+.. +++|+.|++++|.+++.....+ ..+++|+.|++++|++++.... ....+++|+.|++++|+++
T Consensus 446 ~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~ 519 (594)
T 2p1m_B 446 KVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVS 519 (594)
T ss_dssp HHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCB
T ss_pred HHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCC
Confidence 66666665 8899999999999976555444 5689999999999999655444 4456899999999999884
No 350
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=2.1e-20 Score=178.77 Aligned_cols=114 Identities=25% Similarity=0.236 Sum_probs=45.5
Q ss_pred CCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccccCcccCceE
Q 038671 168 HSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYL 247 (707)
Q Consensus 168 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L 247 (707)
.+++|++|+|++|.+++..+..|..+++|++|++++|++++..+..+..+++|++|+|++|.+++..+..|..+++|+.|
T Consensus 74 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L 153 (208)
T 2o6s_A 74 KLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYI 153 (208)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE
T ss_pred CCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEE
Confidence 33333333333333332223333333344444444444433333333344444444444444443333334444444444
Q ss_pred eeecccccccCchhhhhcccCCeeeecCccCCCCCCccccc
Q 038671 248 NLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICN 288 (707)
Q Consensus 248 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 288 (707)
++++|.+.. .+++|+.|+++.|.+++.+|..++.
T Consensus 154 ~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~ 187 (208)
T 2o6s_A 154 WLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGS 187 (208)
T ss_dssp ECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSS
T ss_pred EecCCCeec-------CCCCHHHHHHHHHhCCceeeccCcc
Confidence 444443321 2234444444444444444444443
No 351
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.84 E-value=5e-21 Score=184.42 Aligned_cols=155 Identities=21% Similarity=0.295 Sum_probs=88.9
Q ss_pred EEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccccCcccCceEeeeccc
Q 038671 174 VLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQ 253 (707)
Q Consensus 174 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~ 253 (707)
.++++++.++ .+|..+. ++|++|++++|.++...+..|..+++|++|+|++|.|++..|..|.++++|++|+|++|.
T Consensus 15 ~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 3444444444 3333222 355555555555554444455555555555555555555555555556666666666666
Q ss_pred ccccCchhhhhcccCCeeeecCccCCCCCCcccccccccceEeccccccCCchhHhhccCCCceeEeeccCcccccCC
Q 038671 254 FIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDISYNELHGSIP 331 (707)
Q Consensus 254 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~l~~n~~~~~~~ 331 (707)
|+...+..|.++++|+.|+|++|.+++..+..|..+++|+.|++++|+|++..+..+..+++|+.|++++|+|.|.+.
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 169 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCH 169 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCc
Confidence 555555555556666666666666655555566666666666666666665555556666666666666666666554
No 352
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=2.3e-20 Score=178.52 Aligned_cols=177 Identities=19% Similarity=0.132 Sum_probs=85.6
Q ss_pred eeecccccccccCCCCCCCCCccEEEeccCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCcc
Q 038671 79 LLTLENNQLRGPIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNI 158 (707)
Q Consensus 79 ~L~l~~n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i 158 (707)
.++.+++.+..++..+ .++|++|++++|+++.+.+..|..+++|++|++++|.++.+.+..|..+++|++|+|++|.+
T Consensus 11 ~v~c~~~~l~~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 88 (208)
T 2o6s_A 11 TVECYSQGRTSVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQL 88 (208)
T ss_dssp EEECCSSCCSSCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEEecCCCccCCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcC
Confidence 3444444444443332 23455555555555544444445555555555555555544444445555555555555555
Q ss_pred CCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccc
Q 038671 159 TGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSL 238 (707)
Q Consensus 159 ~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l 238 (707)
++..+..|..+++|++|++++|.+++..+..|..+++|++|++++|.+++..+..+..+++|++|++++|.+..
T Consensus 89 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~------ 162 (208)
T 2o6s_A 89 QSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC------ 162 (208)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC------
T ss_pred CccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec------
Confidence 54444444445555555555555544444444455555555555555554444444455555555555554431
Q ss_pred cCcccCceEeeecccccccCchhhhh
Q 038671 239 GNLVKLHYLNLSNNQFIKKIPVELEK 264 (707)
Q Consensus 239 ~~l~~L~~L~l~~n~l~~~~~~~~~~ 264 (707)
.+++|++|+++.|++++..|..++.
T Consensus 163 -~~~~l~~L~~~~n~~~g~ip~~~~~ 187 (208)
T 2o6s_A 163 -TCPGIRYLSEWINKHSGVVRNSAGS 187 (208)
T ss_dssp -CTTTTHHHHHHHHHCTTTBBCTTSS
T ss_pred -CCCCHHHHHHHHHhCCceeeccCcc
Confidence 2334455555555555444444433
No 353
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.84 E-value=1.8e-21 Score=196.22 Aligned_cols=172 Identities=26% Similarity=0.320 Sum_probs=95.1
Q ss_pred CCCCCcEEEcccCcCcccCCccccCCCCCCeeecccccccccCCCCCCCCCccEEEeccCccccccCccccCCCCCcEEE
Q 038671 49 NLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRGPIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFID 128 (707)
Q Consensus 49 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ 128 (707)
.+++|++|++++|.+++. + .++.+++|++|++++|.++.+++ +..+++|+.|++++|+++.+. .+..+++|++|+
T Consensus 44 ~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~--~l~~l~~L~~L~ 118 (291)
T 1h6t_A 44 ELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENKVKDLS--SLKDLKKLKSLS 118 (291)
T ss_dssp HHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCGG--GGTTCTTCCEEE
T ss_pred hcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc-cccCCCCCEEECCCCcCCCCh--hhccCCCCCEEE
Confidence 444444444444444422 1 24444445555555554444333 444555555555555554432 255555555555
Q ss_pred cccccccccCCCCCCCCCCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCcccc
Q 038671 129 LSHNYFYGEISSDWGRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCG 208 (707)
Q Consensus 129 L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 208 (707)
+++|.++.+ ..+..+++|+.|++++|.+++. ..+..+++|+.|++++|.+++..+ +..+++|++|++++|.+++
T Consensus 119 L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~ 192 (291)
T 1h6t_A 119 LEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD 192 (291)
T ss_dssp CTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB
T ss_pred CCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC
Confidence 555555543 3455566666666666666643 455666666666666666664333 6666677777777776664
Q ss_pred CCccccCCCCcccEEEccCCccCCC
Q 038671 209 QLSLELGSLTQLERLDLSSNRLSNS 233 (707)
Q Consensus 209 ~~~~~~~~l~~L~~L~l~~n~i~~~ 233 (707)
. + .+..+++|+.|++++|+++..
T Consensus 193 l-~-~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 193 L-R-ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp C-G-GGTTCTTCSEEEEEEEEEECC
T ss_pred C-h-hhccCCCCCEEECcCCcccCC
Confidence 3 2 366677777777777777643
No 354
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.83 E-value=8.3e-21 Score=182.88 Aligned_cols=156 Identities=19% Similarity=0.256 Sum_probs=102.7
Q ss_pred EEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCc-cccCCCCcccEEEccCCccCCCCCccccCcccCceEeeecc
Q 038671 174 VLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLS-LELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNN 252 (707)
Q Consensus 174 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n 252 (707)
.+++++|.++ .+|..+. +.+++|++++|.+++..+ ..|..+++|++|+|++|.|+++.+..|.++++|++|+|++|
T Consensus 15 ~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 5555555555 3343332 244566666666664432 34566666666777666666666666667777777777777
Q ss_pred cccccCchhhhhcccCCeeeecCccCCCCCCcccccccccceEeccccccCCchhHhhccCCCceeEeeccCcccccCCC
Q 038671 253 QFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDISYNELHGSIPN 332 (707)
Q Consensus 253 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~l~~n~~~~~~~~ 332 (707)
++++..+..|.++++|++|+|++|.+++..+..|..+++|+.|++++|+|++..|..+..+++|+.|++++|+|+|.++.
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 171 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYL 171 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGGG
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCch
Confidence 77666666677777777777777777666666777777777777777777766677777777777777777777776653
No 355
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.83 E-value=2.9e-20 Score=187.46 Aligned_cols=188 Identities=26% Similarity=0.338 Sum_probs=99.5
Q ss_pred CcEEEcccCcCcccCCccccCCCCCCeeecccccccccCCCCCCCCCccEEEeccCccccccCccccCCCCCcEEEcccc
Q 038671 53 ITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRGPIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHN 132 (707)
Q Consensus 53 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n 132 (707)
+..+.+..+.+++.. .+..+++|++|++++|.+..+ +++..+++|++|++++|+++.+.+ +..+++|++|++++|
T Consensus 26 ~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~~-~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n 100 (291)
T 1h6t_A 26 TIKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKSV-QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDEN 100 (291)
T ss_dssp HHHHHTTCSCTTSEE--CHHHHHTCCEEECTTSCCCCC-TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred HHHHHhcCCCccccc--chhhcCcccEEEccCCCcccC-hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCC
Confidence 333445555554322 234566666666666666644 345666666666666666665543 556666666666666
Q ss_pred cccccCCCCCCCCCCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCcc
Q 038671 133 YFYGEISSDWGRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSL 212 (707)
Q Consensus 133 ~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 212 (707)
.++.+ ..+..+++|++|+|++|.+++. ..+..+++|+.|++++|++++. ..+..+++|++|++++|.+++..+
T Consensus 101 ~l~~~--~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~- 173 (291)
T 1h6t_A 101 KVKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP- 173 (291)
T ss_dssp CCCCG--GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-
T ss_pred cCCCC--hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh-
Confidence 66543 2255555666666666655532 3345555555555555555432 344555555555555555553322
Q ss_pred ccCCCCcccEEEccCCccCCCCCccccCcccCceEeeeccccc
Q 038671 213 ELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFI 255 (707)
Q Consensus 213 ~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~ 255 (707)
+..+++|++|++++|.+++. + .+..+++|+.|++++|++.
T Consensus 174 -l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 174 -LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp -GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEE
T ss_pred -hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCccc
Confidence 44555555555555555432 1 2444455555555555443
No 356
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.83 E-value=6.8e-21 Score=210.29 Aligned_cols=189 Identities=25% Similarity=0.306 Sum_probs=121.0
Q ss_pred CceeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeeccc
Q 038671 5 LAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLEN 84 (707)
Q Consensus 5 l~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~ 84 (707)
+..+.+..+.+++..+ +..+++|+.|++++|.++. ++ .+..+++|+.|+|++|.+++..+ |..+++|++|+|++
T Consensus 23 l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~ 96 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDE 96 (605)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCS
T ss_pred HHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcC
Confidence 3445566666664433 4567777777887777773 33 47777777888887777775543 77777777777777
Q ss_pred ccccccCCCCCCCCCccEEEeccCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccCCCCch
Q 038671 85 NQLRGPIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGSMPA 164 (707)
Q Consensus 85 n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~ 164 (707)
|.+..+ +.+..+++|+.|+|++|++..+ ..+..+++|+.|+|++|.++.+ ..+..+++|+.|+|++|.+++..+
T Consensus 97 N~l~~l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~- 170 (605)
T 1m9s_A 97 NKIKDL-SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP- 170 (605)
T ss_dssp SCCCCC-TTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG-
T ss_pred CCCCCC-hhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh-
Confidence 777753 3567777777777777777654 3466666666666666666654 455666666666666666664433
Q ss_pred hhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCcccc
Q 038671 165 EIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCG 208 (707)
Q Consensus 165 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 208 (707)
+..+++|+.|+|++|.|++. ..+..+++|+.|+|++|.+..
T Consensus 171 -l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 171 -LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp -GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEEC
T ss_pred -hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcC
Confidence 55566666666666666532 235555566666666665553
No 357
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.83 E-value=4.2e-20 Score=201.53 Aligned_cols=189 Identities=26% Similarity=0.311 Sum_probs=138.4
Q ss_pred CCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeecccccccccCCCCCCCCCccEEEecc
Q 038671 28 SLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRGPIPNLRNLTSLVRVRLNQ 107 (707)
Q Consensus 28 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~l~~l~~L~~L~l~~ 107 (707)
+|+.|+|++|++++ +|..+ +++|++|+|++|.|+ .+| ..+++|++|++++|.|+.++. +.+ +|+.|+|++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~ip~-l~~--~L~~L~Ls~ 129 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLSTLPE-LPA--SLKHLDVDN 129 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSCCCC-CCT--TCCEEECCS
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCCcch-hhc--CCCEEECCC
Confidence 77788888887774 55544 367888888888777 445 446778888888888777555 544 788888888
Q ss_pred CccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCCC
Q 038671 108 NHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEMP 187 (707)
Q Consensus 108 n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 187 (707)
|++++++. .+++|+.|+|++|.++.+.. .+++|++|+|++|.+++ .+. |. ++|+.|+|++|.|+ .+|
T Consensus 130 N~l~~lp~----~l~~L~~L~Ls~N~l~~lp~----~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp 196 (571)
T 3cvr_A 130 NQLTMLPE----LPALLEYINADNNQLTMLPE----LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLP 196 (571)
T ss_dssp SCCSCCCC----CCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCC
T ss_pred CcCCCCCC----cCccccEEeCCCCccCcCCC----cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chh
Confidence 88877554 56788888888888876433 56788888888888875 443 44 78888888888887 555
Q ss_pred hhhhCCCCC-------cEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccccCccc
Q 038671 188 SKLGKLSSL-------IKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVK 243 (707)
Q Consensus 188 ~~~~~l~~L-------~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~ 243 (707)
. +.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|.+++..|..|..+..
T Consensus 197 ~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 197 A-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp C-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred h-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 5 543 66 99999999998 56777777999999999999998888877776543
No 358
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.82 E-value=2.5e-20 Score=194.32 Aligned_cols=160 Identities=26% Similarity=0.239 Sum_probs=90.1
Q ss_pred CCEEeCCCCCCCCCCChhhh-CCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccccCcccCceEeee
Q 038671 172 LKVLDLSSNHIVGEMPSKLG-KLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLS 250 (707)
Q Consensus 172 L~~L~l~~n~l~~~~~~~~~-~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~ 250 (707)
++.|+|++|.|++..+..|. .+++|++|+|++|+|++..+..|..+++|++|+|++|+|+...+..|.++++|+.|+|+
T Consensus 41 l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 120 (361)
T 2xot_A 41 TALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLY 120 (361)
T ss_dssp CSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECC
Confidence 44444444444444444444 45555555555555554444455555555555555555554445555555556666666
Q ss_pred cccccccCchhhhhcccCCeeeecCccCCCCCCccc---ccccccceEeccccccCCchhHhhccCCCc--eeEeeccCc
Q 038671 251 NNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQI---CNMQSLEKLNLSHNNLSGFIPSCFEELHGL--SYIDISYNE 325 (707)
Q Consensus 251 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~---~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L--~~l~l~~n~ 325 (707)
+|+|....+..|.++++|+.|+|++|.|+...+..| ..+++|+.|+|++|+|+...+..+..++.+ +.|++++|+
T Consensus 121 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~ 200 (361)
T 2xot_A 121 NNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNP 200 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSC
T ss_pred CCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCC
Confidence 665555555555666666666666666644333333 446667777777777766655666666653 667777777
Q ss_pred ccccCC
Q 038671 326 LHGSIP 331 (707)
Q Consensus 326 ~~~~~~ 331 (707)
|.|.+.
T Consensus 201 ~~C~C~ 206 (361)
T 2xot_A 201 LECDCK 206 (361)
T ss_dssp EECCHH
T ss_pred ccCCcC
Confidence 777654
No 359
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.82 E-value=1.1e-19 Score=198.29 Aligned_cols=186 Identities=23% Similarity=0.249 Sum_probs=90.7
Q ss_pred CCcEEEcccCcCcccCCccccCCCCCCeeecccccccccCCCCCCCCCccEEEeccCccccccCccccCCCCCcEEEccc
Q 038671 52 QITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRGPIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSH 131 (707)
Q Consensus 52 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~ 131 (707)
+|+.|+|++|.+++ +|..+. ++|++|+|++|.|+.++ ..+++|+.|++++|++++++. +.. +|++|+|++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~~ip---~~l~~L~~L~Ls~N~l~~ip~--l~~--~L~~L~Ls~ 129 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALISLP---ELPASLEYLDACDNRLSTLPE--LPA--SLKHLDVDN 129 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCSCCC---CCCTTCCEEECCSSCCSCCCC--CCT--TCCEEECCS
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCcccc---cccCCCCEEEccCCCCCCcch--hhc--CCCEEECCC
Confidence 56666666666664 343332 45666666666666444 334566666666666655433 332 555666666
Q ss_pred ccccccCCCCCCCCCCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCc
Q 038671 132 NYFYGEISSDWGRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLS 211 (707)
Q Consensus 132 n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 211 (707)
|.++++.. .+++|+.|+|++|.+++ .+. .+++|+.|+|++|+|++ +|. |. ++|+.|+|++|+|+ .+|
T Consensus 130 N~l~~lp~----~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp 196 (571)
T 3cvr_A 130 NQLTMLPE----LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLP 196 (571)
T ss_dssp SCCSCCCC----CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCC
T ss_pred CcCCCCCC----cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chh
Confidence 55554322 34555555555555553 222 34455555555555553 333 33 45555555555555 222
Q ss_pred cccCCCCcc-------cEEEccCCccCCCCCccccCcccCceEeeecccccccCchhhhh
Q 038671 212 LELGSLTQL-------ERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPVELEK 264 (707)
Q Consensus 212 ~~~~~l~~L-------~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~ 264 (707)
. +.. +| +.|+|++|.|+ .+|..+..+++|+.|+|++|++++..|..+..
T Consensus 197 ~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~ 252 (571)
T 3cvr_A 197 A-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQ 252 (571)
T ss_dssp C-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHH
T ss_pred h-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHH
Confidence 2 222 33 44444444444 23333333444444444444444444444433
No 360
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=8.6e-20 Score=201.51 Aligned_cols=172 Identities=27% Similarity=0.369 Sum_probs=84.4
Q ss_pred cCCCCCCeeecccccccccCCCCCCCCCccEEEeccCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEE
Q 038671 72 GNLVKLTLLTLENNQLRGPIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTL 151 (707)
Q Consensus 72 ~~l~~L~~L~l~~n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L 151 (707)
..+++|+.|++++|.+..++ .+..+++|+.|+|++|+++.+.+ +..+++|+.|+|++|.++.+ ..+..+++|+.|
T Consensus 40 ~~L~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L 114 (605)
T 1m9s_A 40 NELNSIDQIIANNSDIKSVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDL--SSLKDLKKLKSL 114 (605)
T ss_dssp HHHTTCCCCBCTTCCCCCCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCC--TTSTTCTTCCEE
T ss_pred hcCCCCCEEECcCCCCCCCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCC--hhhccCCCCCEE
Confidence 34444444444444444332 34444445555555554444433 44555555555555555432 134555555555
Q ss_pred EcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccC
Q 038671 152 DFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLS 231 (707)
Q Consensus 152 ~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~ 231 (707)
+|++|.+++. ..+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|.+++..+ +..+++|+.|+|++|.|+
T Consensus 115 ~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~ 188 (605)
T 1m9s_A 115 SLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS 188 (605)
T ss_dssp ECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred EecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCC
Confidence 5555555532 2344555555555555555432 344555555555555555553333 455555555555555555
Q ss_pred CCCCccccCcccCceEeeecccccc
Q 038671 232 NSIPKSLGNLVKLHYLNLSNNQFIK 256 (707)
Q Consensus 232 ~~~~~~l~~l~~L~~L~l~~n~l~~ 256 (707)
+. ..+..+++|+.|+|++|++.+
T Consensus 189 ~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 189 DL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp BC--GGGTTCTTCSEEECCSEEEEC
T ss_pred CC--hHHccCCCCCEEEccCCcCcC
Confidence 33 234555555555555555543
No 361
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=2.5e-19 Score=172.54 Aligned_cols=149 Identities=18% Similarity=0.273 Sum_probs=80.3
Q ss_pred eeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeeccccc
Q 038671 7 FLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQ 86 (707)
Q Consensus 7 ~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~ 86 (707)
.+++++++++ .+|..+. ++|++|+|++|+|+++.+..|.++++|++|+|++|.|++..|..|.++++|++|+|++|.
T Consensus 15 ~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 4556666666 4454443 456666666666665555556666666666666666665555556666666666666655
Q ss_pred ccccCCC-CCCCCCccEEEeccCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCcc
Q 038671 87 LRGPIPN-LRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNI 158 (707)
Q Consensus 87 i~~~~~~-l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i 158 (707)
|+.+++. |.++++|+.|+|++|+++.+.+..|..+++|++|+|++|.++.+.+..|..+++|+.|+|++|.+
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 164 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPF 164 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCE
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCc
Confidence 5554443 34455555555555555554444444455555555555554444444444444444444444443
No 362
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.81 E-value=7.2e-21 Score=195.90 Aligned_cols=284 Identities=11% Similarity=0.078 Sum_probs=182.2
Q ss_pred CCCCCeEECCCCccccccCcCccC-CCCCcEEEcccCcCc--ccCCccccCCCCCCeeecccccccccCCCCCC------
Q 038671 26 LKSLSDLELSGNKLCGSIPHSLGN-LTQITFLTLFDNALS--GAIPKEYGNLVKLTLLTLENNQLRGPIPNLRN------ 96 (707)
Q Consensus 26 l~~L~~L~l~~n~i~~~~~~~~~~-l~~L~~L~L~~n~i~--~~~~~~~~~l~~L~~L~l~~n~i~~~~~~l~~------ 96 (707)
+.+|+.|.++++- .......+.. +++|++|+|++|+|. ...... ++.++.+.+..|.|. ...|.+
T Consensus 24 ~~~l~~L~l~g~i-~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~---~~~~~~~~~~~~~I~--~~aF~~~~~~~~ 97 (329)
T 3sb4_A 24 ANSITHLTLTGKL-NAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGT---YPNGKFYIYMANFVP--AYAFSNVVNGVT 97 (329)
T ss_dssp HHHCSEEEEEEEE-CHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSS---SGGGCCEEECTTEEC--TTTTEEEETTEE
T ss_pred hCceeEEEEeccc-cHHHHHHHHHhhccCeEEecCcceeEEecCcccc---ccccccccccccccC--HHHhcccccccc
Confidence 4567777777642 2111123333 677888888888777 222222 223555566666443 234666
Q ss_pred --CCCccEEEeccCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCc----cCCCCchhhhCCC
Q 038671 97 --LTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNN----ITGSMPAEIIHSS 170 (707)
Q Consensus 97 --l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~----i~~~~~~~~~~~~ 170 (707)
+++|+.|+|.+ +++.+...+|..+++|+.|++++|.+..+.+.+|..+.++..+.+..+. ........|..+.
T Consensus 98 ~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~ 176 (329)
T 3sb4_A 98 KGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGE 176 (329)
T ss_dssp EECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESC
T ss_pred cccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccc
Confidence 78888888877 7777878888888888888888888877777888887777777666532 2223444555566
Q ss_pred CCC-EEeCCCCCCCCCCChhhh----CCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccccCcccCc
Q 038671 171 QLK-VLDLSSNHIVGEMPSKLG----KLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLH 245 (707)
Q Consensus 171 ~L~-~L~l~~n~l~~~~~~~~~----~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~ 245 (707)
.|+ .+.+.... .++..+. ...++..+.+.++-...........+++|+.|+|++|.++.+.+.+|.++.+|+
T Consensus 177 ~L~~~i~~~~~~---~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~ 253 (329)
T 3sb4_A 177 PLETTIQVGAMG---KLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLL 253 (329)
T ss_dssp CCEEEEEECTTC---CHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCC
T ss_pred ccceeEEecCCC---cHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCC
Confidence 666 44443321 1111111 234555666655432211111112367788888888778777777788888888
Q ss_pred eEeeecccccccCchhhhhcccCC-eeeecCccCCCCCCcccccccccceEeccccccCCchhHhhccCCCceeEee
Q 038671 246 YLNLSNNQFIKKIPVELEKLIHLS-ELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDI 321 (707)
Q Consensus 246 ~L~l~~n~l~~~~~~~~~~l~~L~-~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~l 321 (707)
.|+|.+| +..+...+|.++.+|+ .+++.+ .++.+.+.+|.++++|+.+++++|.++.+.+..|..+++|+.++.
T Consensus 254 ~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 254 KIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 8888777 6677777788888888 888877 666677778888888888888888887777777888888877763
No 363
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.81 E-value=9.1e-21 Score=195.13 Aligned_cols=281 Identities=12% Similarity=0.088 Sum_probs=213.8
Q ss_pred CCCceeeccCCeeeecCCccccC-CCCCCeEECCCCccc--cccCcCccCCCCCcEEEcccCcCcccCCccccC------
Q 038671 3 SNLAFLYLYNNSFSGSIPSEIGR-LKSLSDLELSGNKLC--GSIPHSLGNLTQITFLTLFDNALSGAIPKEYGN------ 73 (707)
Q Consensus 3 ~~l~~L~l~~n~i~~~~~~~~~~-l~~L~~L~l~~n~i~--~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~------ 73 (707)
.+++.|.++++ +.......+.. +++|+.|+|++|+|. ......+ +.+..+.+..|. +.+.+|.+
T Consensus 25 ~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~---I~~~aF~~~~~~~~ 97 (329)
T 3sb4_A 25 NSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANF---VPAYAFSNVVNGVT 97 (329)
T ss_dssp HHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTE---ECTTTTEEEETTEE
T ss_pred CceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccccc---cccccccccccc---cCHHHhcccccccc
Confidence 45788888875 33222234445 889999999999998 3333333 335667777774 44678888
Q ss_pred --CCCCCeeecccccccccCC-CCCCCCCccEEEeccCccccccCccccCCCCCcEEEcccccc----cccCCCCCCCCC
Q 038671 74 --LVKLTLLTLENNQLRGPIP-NLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYF----YGEISSDWGRCP 146 (707)
Q Consensus 74 --l~~L~~L~l~~n~i~~~~~-~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i----~~~~~~~~~~~~ 146 (707)
+++|+.|+|++ .++.+.+ +|.+|++|+.|++.+|.+..+...+|..+.++..+.+..+.. ..+...+|.++.
T Consensus 98 ~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~ 176 (329)
T 3sb4_A 98 KGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGE 176 (329)
T ss_dssp EECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESC
T ss_pred cccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccc
Confidence 99999999999 8887766 599999999999999999999999999999898888877433 345567788888
Q ss_pred CCc-EEEcCCCccCCCCchhhh----CCCCCCEEeCCCCCCCCCCChhh-hCCCCCcEEEecCCccccCCccccCCCCcc
Q 038671 147 KLG-TLDFSSNNITGSMPAEII----HSSQLKVLDLSSNHIVGEMPSKL-GKLSSLIKLILNSNQLCGQLSLELGSLTQL 220 (707)
Q Consensus 147 ~L~-~L~L~~n~i~~~~~~~~~----~~~~L~~L~l~~n~l~~~~~~~~-~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 220 (707)
.|+ .+.+.... ..+..+. ...++..+.+.++-.. .....+ ..+++|++|++++|+++.+...+|.++++|
T Consensus 177 ~L~~~i~~~~~~---~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L 252 (329)
T 3sb4_A 177 PLETTIQVGAMG---KLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYL 252 (329)
T ss_dssp CCEEEEEECTTC---CHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTC
T ss_pred ccceeEEecCCC---cHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCC
Confidence 888 66665432 1222221 2456777777765322 212222 237899999999999998888889999999
Q ss_pred cEEEccCCccCCCCCccccCcccCc-eEeeecccccccCchhhhhcccCCeeeecCccCCCCCCcccccccccceEec
Q 038671 221 ERLDLSSNRLSNSIPKSLGNLVKLH-YLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNL 297 (707)
Q Consensus 221 ~~L~l~~n~i~~~~~~~l~~l~~L~-~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l 297 (707)
+.|+|++| ++.+.+.+|.++++|+ .|++.+ .++.+.+.+|.++++|+.|++++|.++...+.+|.++++|+.++.
T Consensus 253 ~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 253 LKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred CEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 99999988 7778888999999999 999988 777888889999999999999999998888889999999998864
No 364
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=1.5e-19 Score=188.43 Aligned_cols=136 Identities=29% Similarity=0.303 Sum_probs=63.7
Q ss_pred CCCCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEE
Q 038671 144 RCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERL 223 (707)
Q Consensus 144 ~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 223 (707)
.+++|++|+|++|.|+...+..|.++++|+.|+|++|+|+...+..|..+++|++|+|++|+|+...+..|..+++|+.|
T Consensus 62 ~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 141 (361)
T 2xot_A 62 RLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKL 141 (361)
T ss_dssp CCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred cccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEE
Confidence 33333333333333333333333344444444444444443333334444444444444444444444444455555555
Q ss_pred EccCCccCCCCCccc---cCcccCceEeeecccccccCchhhhhccc--CCeeeecCccCC
Q 038671 224 DLSSNRLSNSIPKSL---GNLVKLHYLNLSNNQFIKKIPVELEKLIH--LSELDLSHNFLG 279 (707)
Q Consensus 224 ~l~~n~i~~~~~~~l---~~l~~L~~L~l~~n~l~~~~~~~~~~l~~--L~~L~l~~n~l~ 279 (707)
+|++|.|+.+.+..| ..+++|+.|+|++|+|+...+..+..++. |+.|+|++|.+.
T Consensus 142 ~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 142 YLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp ECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred ECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 555555544333333 34555666666666665555555555554 356666666663
No 365
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.80 E-value=4.1e-19 Score=172.22 Aligned_cols=157 Identities=25% Similarity=0.305 Sum_probs=96.4
Q ss_pred CCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccccCcccCceEeeec
Q 038671 172 LKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSN 251 (707)
Q Consensus 172 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~ 251 (707)
.+.++.+++.++ .+|..+. ++|++|++++|.+++..+..|..+++|++|+|++|.|+.+.+..|..+++|+.|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 344555555554 3333222 5566666666666655555566666666666666666555555566666666666666
Q ss_pred ccccccCchhhhhcccCCeeeecCccCCCCCCcccccccccceEeccccccCCchhHhhccCCCceeEeeccCcccccCC
Q 038671 252 NQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDISYNELHGSIP 331 (707)
Q Consensus 252 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~l~~n~~~~~~~ 331 (707)
|++++..+..|..+++|+.|+|++|.++ .+|..+..+++|+.|++++|+|++..+..+..+++|+.|++++|+|+|.++
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 6666555555666666666666666664 455566666677777777777666655666666777777777777777665
Q ss_pred C
Q 038671 332 N 332 (707)
Q Consensus 332 ~ 332 (707)
.
T Consensus 177 ~ 177 (229)
T 3e6j_A 177 D 177 (229)
T ss_dssp G
T ss_pred h
Confidence 3
No 366
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.79 E-value=4.2e-18 Score=178.73 Aligned_cols=261 Identities=12% Similarity=0.104 Sum_probs=126.9
Q ss_pred CCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeecccccccccCC-CCCCCCCccEEEe
Q 038671 27 KSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRGPIP-NLRNLTSLVRVRL 105 (707)
Q Consensus 27 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~-~l~~l~~L~~L~l 105 (707)
..++.+.+.++ ++.+...+|.+. +|+.+.+.++ ++.+...+|.+. +|+.+.+.+ .+..+.. +|.+|++|+.+++
T Consensus 113 ~~l~~i~ip~~-i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPNS-VKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCTT-CCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECCc-cCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 45555555442 333445555553 4666665544 444555555553 456665554 3433332 3555555666665
Q ss_pred ccCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCC
Q 038671 106 NQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGE 185 (707)
Q Consensus 106 ~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~ 185 (707)
.+|+++.++..+|. +.+|+.+.|..+ ++.+...+|.+|++|+.+.+..| ++.+...+|.+ .+|+.+.+. +.++.+
T Consensus 188 ~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I 262 (401)
T 4fdw_A 188 SKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNI 262 (401)
T ss_dssp TTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEE
T ss_pred CCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEE
Confidence 55555555555555 355555555533 44455555555555555555543 33344444444 455555552 233334
Q ss_pred CChhhhCCCCCcEEEecCCccc-----cCCccccCCCCcccEEEccCCccCCCCCccccCcccCceEeeecccccccCch
Q 038671 186 MPSKLGKLSSLIKLILNSNQLC-----GQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPV 260 (707)
Q Consensus 186 ~~~~~~~l~~L~~L~l~~n~l~-----~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~ 260 (707)
...+|..+++|+++.+.+|.+. ......|.++++|+.++|. +.++.+...+|.++.+|+.|.|.+| ++.+...
T Consensus 263 ~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~ 340 (401)
T 4fdw_A 263 ASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFS 340 (401)
T ss_dssp CTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTT
T ss_pred ChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHH
Confidence 4455555555555555554443 2333444444445544444 2244344444444444444444332 3334444
Q ss_pred hhhhcccCCeeeecCccCCCCCCccccccc-ccceEecccc
Q 038671 261 ELEKLIHLSELDLSHNFLGEEMPSQICNMQ-SLEKLNLSHN 300 (707)
Q Consensus 261 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~-~L~~L~l~~n 300 (707)
+|.++ +|+.+++++|.+.......|.+++ .+..|++..+
T Consensus 341 aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~ 380 (401)
T 4fdw_A 341 AFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAE 380 (401)
T ss_dssp SSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGG
T ss_pred hCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHH
Confidence 44444 444444444444333333444332 3344444433
No 367
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.79 E-value=4.4e-18 Score=178.55 Aligned_cols=264 Identities=11% Similarity=0.051 Sum_probs=226.7
Q ss_pred CCCceeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeec
Q 038671 3 SNLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTL 82 (707)
Q Consensus 3 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l 82 (707)
..++.+.+.++ ++.+...+|.+. +|+.+.+..+ ++.+...+|.+. +|+.+.+.+ .++.+...+|.++.+|+.+++
T Consensus 113 ~~l~~i~ip~~-i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPNS-VKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCTT-CCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECCc-cCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 45677777664 555778889885 8999999877 776888899985 699999986 777788899999999999999
Q ss_pred ccccccccCCCCCCCCCccEEEeccCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccCCCC
Q 038671 83 ENNQLRGPIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGSM 162 (707)
Q Consensus 83 ~~n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~ 162 (707)
++|.++.++.....+.+|+.+.+.. .++.+...+|..+++|+.+++..| ++.+...+|.+ .+|+.+.|. +.++.+.
T Consensus 188 ~~n~l~~I~~~aF~~~~L~~l~lp~-~l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I~ 263 (401)
T 4fdw_A 188 SKTKITKLPASTFVYAGIEEVLLPV-TLKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNIA 263 (401)
T ss_dssp TTSCCSEECTTTTTTCCCSEEECCT-TCCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEEC
T ss_pred CCCcceEechhhEeecccCEEEeCC-chheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEEC
Confidence 9999998887644479999999984 588899999999999999999986 67788899998 789999994 5577788
Q ss_pred chhhhCCCCCCEEeCCCCCCC-----CCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCcc
Q 038671 163 PAEIIHSSQLKVLDLSSNHIV-----GEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKS 237 (707)
Q Consensus 163 ~~~~~~~~~L~~L~l~~n~l~-----~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~ 237 (707)
..+|.++++|+.+++.+|.+. ......|..+++|+.+.+. +.++.....+|.++++|+.+.|..| ++.+...+
T Consensus 264 ~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~a 341 (401)
T 4fdw_A 264 SRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSA 341 (401)
T ss_dssp TTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTS
T ss_pred hhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHh
Confidence 999999999999999988765 4677899999999999999 5588788899999999999999665 77788899
Q ss_pred ccCcccCceEeeecccccccCchhhhhcc-cCCeeeecCccC
Q 038671 238 LGNLVKLHYLNLSNNQFIKKIPVELEKLI-HLSELDLSHNFL 278 (707)
Q Consensus 238 l~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l 278 (707)
|.++ +|+.|++++|.+.......|.+++ +++.|.+..+.+
T Consensus 342 F~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 342 FNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp SSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred CCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 9999 999999999998877778888884 788999888765
No 368
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.79 E-value=5.6e-20 Score=182.27 Aligned_cols=80 Identities=25% Similarity=0.363 Sum_probs=34.9
Q ss_pred CCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEc
Q 038671 146 PKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDL 225 (707)
Q Consensus 146 ~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 225 (707)
++|++|+|++|.+++. ..+..+++|+.|++++|++++. + .+..+++|++|++++|++++. ..+..+++|+.|++
T Consensus 106 ~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l 179 (263)
T 1xeu_A 106 ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDL 179 (263)
T ss_dssp SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEE
T ss_pred CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeC
Confidence 4444444444444422 1244444444444444444422 1 344444444444444444432 33444444444444
Q ss_pred cCCccC
Q 038671 226 SSNRLS 231 (707)
Q Consensus 226 ~~n~i~ 231 (707)
++|.++
T Consensus 180 ~~N~~~ 185 (263)
T 1xeu_A 180 TGQKCV 185 (263)
T ss_dssp EEEEEE
T ss_pred CCCccc
Confidence 444444
No 369
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=1.4e-18 Score=167.19 Aligned_cols=113 Identities=27% Similarity=0.326 Sum_probs=56.2
Q ss_pred CCCCCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccE
Q 038671 143 GRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLER 222 (707)
Q Consensus 143 ~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 222 (707)
..+++|++|+|++|.+++..+..|.++++|++|+|++|.+++..+..|..+++|++|+|++|++++..+..|..+++|++
T Consensus 54 ~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 133 (220)
T 2v70_A 54 KKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRL 133 (220)
T ss_dssp GGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSE
T ss_pred ccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCE
Confidence 33344444444444444333333444444444444444444333444444445555555555555444455555555555
Q ss_pred EEccCCccCCCCCccccCcccCceEeeeccccc
Q 038671 223 LDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFI 255 (707)
Q Consensus 223 L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~ 255 (707)
|+|++|.+++..|..|..+++|+.|+|++|++.
T Consensus 134 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 134 LSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp EECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred EECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 555555555555555666666666666666654
No 370
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.78 E-value=1.4e-19 Score=179.39 Aligned_cols=171 Identities=22% Similarity=0.295 Sum_probs=111.3
Q ss_pred CCCCCCeeecccccccccCCCCCCCCCccEEEeccCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEE
Q 038671 73 NLVKLTLLTLENNQLRGPIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLD 152 (707)
Q Consensus 73 ~l~~L~~L~l~~n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~ 152 (707)
++.++..+++++|.+++++ .+..+++|+.|++++|+++.+. .+..+++|++|+|++|.++++.+ +..+++|++|+
T Consensus 17 ~l~~l~~l~l~~~~i~~~~-~~~~l~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV-SQKELSGVQNFNGDNSNIQSLA--GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE-CHHHHTTCSEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHHhcCCCccccc-chhhcCcCcEEECcCCCcccch--HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 3445555666666665444 4555666666666666666543 45666666677777666665543 66677777777
Q ss_pred cCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCC
Q 038671 153 FSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSN 232 (707)
Q Consensus 153 L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~ 232 (707)
|++|.+++... +.. ++|+.|++++|++++. ..+..+++|++|++++|++++. + .+..+++|++|++++|.+++
T Consensus 92 L~~N~l~~l~~--~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~ 164 (263)
T 1xeu_A 92 VNRNRLKNLNG--IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITN 164 (263)
T ss_dssp CCSSCCSCCTT--CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCB
T ss_pred CCCCccCCcCc--ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcc
Confidence 77777764322 222 7788888888877643 3477777777777777777743 2 56677777777777777775
Q ss_pred CCCccccCcccCceEeeeccccccc
Q 038671 233 SIPKSLGNLVKLHYLNLSNNQFIKK 257 (707)
Q Consensus 233 ~~~~~l~~l~~L~~L~l~~n~l~~~ 257 (707)
. ..+..+++|+.|++++|++...
T Consensus 165 ~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 165 T--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp C--TTSTTCCCCCEEEEEEEEEECC
T ss_pred h--HHhccCCCCCEEeCCCCcccCC
Confidence 5 5567777777777777777554
No 371
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.78 E-value=6e-19 Score=174.27 Aligned_cols=139 Identities=18% Similarity=0.221 Sum_probs=108.1
Q ss_pred CCCCceeeecCCeeEEEEEc-CCCcE--EEEEecCCCCCc---------------------hhhhHHHHHHHHHHHhcCC
Q 038671 438 FDDEHCIGKGGQGSVYKAEL-PSGEI--VAVKKFHSPLPS---------------------EMASQQEFLNEVKTLTGIR 493 (707)
Q Consensus 438 ~~~~~~lg~G~~g~vy~~~~-~~~~~--vavK~~~~~~~~---------------------~~~~~~~~~~e~~~l~~l~ 493 (707)
|++.+.||+|+||.||+|.. .+|+. ||||++...... .......+.+|++.+.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56789999999999999976 78988 999987543211 0112246788999999998
Q ss_pred CCce--eeeeeeeecCCceeEEEeeecc-C----cHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHH-hCCCCCeEec
Q 038671 494 HRNI--VKFYGFCSHARHSFIVYEYLEM-G----SLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMH-NDCFPPIVHR 565 (707)
Q Consensus 494 h~ni--v~~~~~~~~~~~~~lv~e~~~~-~----~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH-~~~~~~ivH~ 565 (707)
|+++ +.++++ +..++||||+.+ | +|.++... .++..+..++.|++.||.||| +. ||+||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~---givHr 195 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQEA---ELVHA 195 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHTS---CEECS
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHHC---CEEeC
Confidence 8754 444432 467899999943 3 77766421 235567889999999999999 88 99999
Q ss_pred CCCCCCeeecCCCCeEEeccccceec
Q 038671 566 DISSKNVLLDLENEAHVSDFGTAKFL 591 (707)
Q Consensus 566 dlk~~Nil~~~~~~~kl~Dfg~~~~~ 591 (707)
||||+|||++. .++|+|||+|...
T Consensus 196 Dlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 196 DLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SCSTTSEEESS--SEEECCCTTCEET
T ss_pred CCCHHHEEEcC--cEEEEECcccccC
Confidence 99999999997 9999999999764
No 372
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.77 E-value=5.8e-18 Score=164.09 Aligned_cols=151 Identities=21% Similarity=0.197 Sum_probs=85.1
Q ss_pred cEEEeccCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCC
Q 038671 101 VRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSN 180 (707)
Q Consensus 101 ~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n 180 (707)
+.+++++++++.++... .++|++|+|++|.++.+.+..|..+++|++|+|++|.++...+..|..+++|+.|+|++|
T Consensus 22 ~~v~c~~~~l~~ip~~~---~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHASVPAGI---PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCSSCCSCC---CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcCccCCCC---CCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 34444444444443321 145555555555555554555555555555555555555444444555555555555555
Q ss_pred CCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccccCcccCceEeeeccccc
Q 038671 181 HIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFI 255 (707)
Q Consensus 181 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~ 255 (707)
+|++..+..|..+++|++|++++|+++ .+|..+..+++|++|+|++|.+++..+..|..+++|+.|+|++|++.
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBC
T ss_pred cCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCcc
Confidence 555444455555666666666666665 44555566666666666666666555556666666677777766664
No 373
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.76 E-value=2e-18 Score=163.25 Aligned_cols=152 Identities=18% Similarity=0.214 Sum_probs=75.5
Q ss_pred cCCCCCCeeecccccccccCCCCCCCCCccEEEeccCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEE
Q 038671 72 GNLVKLTLLTLENNQLRGPIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTL 151 (707)
Q Consensus 72 ~~l~~L~~L~l~~n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L 151 (707)
+.+++|++|++++|.+..++ ++..+++|++|++++|.++.+ ..+..+++|++|++++|.++...+..+..+++|++|
T Consensus 41 ~~l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~l~~n~~~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 117 (197)
T 4ezg_A 41 AQMNSLTYITLANINVTDLT-GIEYAHNIKDLTINNIHATNY--NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLL 117 (197)
T ss_dssp HHHHTCCEEEEESSCCSCCT-TGGGCTTCSEEEEESCCCSCC--GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEE
T ss_pred hhcCCccEEeccCCCccChH-HHhcCCCCCEEEccCCCCCcc--hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEE
Confidence 34455555555555555433 455555555555555544432 245555555555555555555444555555555555
Q ss_pred EcCCCccCCCCchhhhCCCCCCEEeCCCCC-CCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCcc
Q 038671 152 DFSSNNITGSMPAEIIHSSQLKVLDLSSNH-IVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRL 230 (707)
Q Consensus 152 ~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i 230 (707)
++++|.+++..+..+..+++|+.|++++|. ++ .++ .+..+++|++|++++|.+++. + .+..+++|++|++++|+|
T Consensus 118 ~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 118 DISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp ECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC--
T ss_pred EecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCccc
Confidence 555555554445555555555555555554 33 222 344444444444444444421 1 333444444444444443
No 374
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.76 E-value=4.4e-21 Score=210.60 Aligned_cols=203 Identities=22% Similarity=0.195 Sum_probs=128.3
Q ss_pred cCCCCCcEEEcccCcCcccCCccccCCCCCCeeeccccc-------------ccc-cCCCCCCCCCccEEE-eccCcccc
Q 038671 48 GNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQ-------------LRG-PIPNLRNLTSLVRVR-LNQNHLTG 112 (707)
Q Consensus 48 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~-------------i~~-~~~~l~~l~~L~~L~-l~~n~l~~ 112 (707)
..+++|+.|+|++|.++ .+|..++++++|+.|++++|. ... .+..+..+++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 34556666666666665 446666666666666665543 111 111233444444444 3333322
Q ss_pred ccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhC
Q 038671 113 NISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGK 192 (707)
Q Consensus 113 ~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~ 192 (707)
+|+.+.+++|.++.+.+ ..|+.|+|++|.+++ .+. +..+++|+.|+|++|.|+ .+|..++.
T Consensus 424 ----------~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 484 (567)
T 1dce_A 424 ----------DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAA 484 (567)
T ss_dssp ----------HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGG
T ss_pred ----------hhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhc
Confidence 23334444555543322 237777777777774 344 777777888888888777 66777778
Q ss_pred CCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCC-CccccCcccCceEeeecccccccCch---hhhhcccC
Q 038671 193 LSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSI-PKSLGNLVKLHYLNLSNNQFIKKIPV---ELEKLIHL 268 (707)
Q Consensus 193 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~-~~~l~~l~~L~~L~l~~n~l~~~~~~---~~~~l~~L 268 (707)
+++|+.|+|++|.+++ +| .+..+++|++|+|++|.|++.. |..|+.+++|+.|+|++|++++..+. .+..+++|
T Consensus 485 l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L 562 (567)
T 1dce_A 485 LRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSV 562 (567)
T ss_dssp CTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTC
T ss_pred CCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCccc
Confidence 8888888888888875 45 6778888888888888888766 77888888888888888888766442 24457778
Q ss_pred Ceeee
Q 038671 269 SELDL 273 (707)
Q Consensus 269 ~~L~l 273 (707)
+.|++
T Consensus 563 ~~L~l 567 (567)
T 1dce_A 563 SSILT 567 (567)
T ss_dssp SEEEC
T ss_pred CccCC
Confidence 87764
No 375
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.76 E-value=3.9e-18 Score=161.33 Aligned_cols=153 Identities=16% Similarity=0.275 Sum_probs=95.0
Q ss_pred hCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccccCcccCce
Q 038671 167 IHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHY 246 (707)
Q Consensus 167 ~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~ 246 (707)
..+++|+.|++++|.++ .++ .+..+++|++|++++|.++ .+..+..+++|++|++++|.+++..+..++.+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 34455666666666665 333 4556666666666666554 2235566666666666666666555666666677777
Q ss_pred EeeecccccccCchhhhhcccCCeeeecCcc-CCCCCCcccccccccceEeccccccCCchhHhhccCCCceeEeeccCc
Q 038671 247 LNLSNNQFIKKIPVELEKLIHLSELDLSHNF-LGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDISYNE 325 (707)
Q Consensus 247 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~l~~n~ 325 (707)
|++++|++++..+..+..+++|++|++++|. ++. .+ .+..+++|+.|++++|++++.. .+..+++|+.|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~-~~-~l~~l~~L~~L~l~~n~i~~~~--~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAITD-IM-PLKTLPELKSLNIQFDGVHDYR--GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCC-CG-GGGGCSSCCEEECTTBCCCCCT--TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCccc-cH-hhcCCCCCCEEECCCCCCcChH--HhccCCCCCEEEeeCcc
Confidence 7777777666566666667777777777776 533 33 4666777777777777776542 56667777777777776
Q ss_pred cc
Q 038671 326 LH 327 (707)
Q Consensus 326 ~~ 327 (707)
+.
T Consensus 193 i~ 194 (197)
T 4ezg_A 193 IG 194 (197)
T ss_dssp --
T ss_pred cC
Confidence 64
No 376
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.74 E-value=8.5e-21 Score=208.32 Aligned_cols=188 Identities=23% Similarity=0.216 Sum_probs=113.9
Q ss_pred cCCCCCCeeecccccccccCCCCCCCCCccEEEeccCc-------------cccccCccccCCCCCcEEE-ccccccccc
Q 038671 72 GNLVKLTLLTLENNQLRGPIPNLRNLTSLVRVRLNQNH-------------LTGNISESFGIHPNLAFID-LSHNYFYGE 137 (707)
Q Consensus 72 ~~l~~L~~L~l~~n~i~~~~~~l~~l~~L~~L~l~~n~-------------l~~~~~~~~~~~~~L~~L~-L~~n~i~~~ 137 (707)
..+++|+.|+|++|.++.++..+..+++|+.|++++|. ..+..+..++.+++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~-- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKSTVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD-- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH--
T ss_pred ccCccceeccCChhhHHhhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc--
Confidence 45678888888888888777777888888888876654 2333344455555555555 4544432
Q ss_pred CCCCCCCCCCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCC
Q 038671 138 ISSDWGRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSL 217 (707)
Q Consensus 138 ~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 217 (707)
+|+.+.+++|.++...+ ..|+.|+|++|.|++ +|. +..+++|+.|+|++|.|+ .+|..+..+
T Consensus 424 ---------~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l 485 (567)
T 1dce_A 424 ---------DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAAL 485 (567)
T ss_dssp ---------HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGC
T ss_pred ---------hhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcC
Confidence 23344445554442111 246667777777663 444 666666666666666666 455566666
Q ss_pred CcccEEEccCCccCCCCCccccCcccCceEeeecccccccC-chhhhhcccCCeeeecCccCCCC
Q 038671 218 TQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKI-PVELEKLIHLSELDLSHNFLGEE 281 (707)
Q Consensus 218 ~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~~~ 281 (707)
++|+.|+|++|.|++ +| .++++++|+.|+|++|+|++.. |..+..+++|+.|+|++|.+++.
T Consensus 486 ~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~ 548 (567)
T 1dce_A 486 RCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 548 (567)
T ss_dssp TTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGS
T ss_pred CCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCC
Confidence 666666666666664 33 5666666666666666665554 55566666666666666666443
No 377
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.74 E-value=3.4e-18 Score=160.84 Aligned_cols=173 Identities=23% Similarity=0.294 Sum_probs=109.5
Q ss_pred CEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCcc-ccCCCCcccEEEccCCccCCCCCccccCcccCceEeeec
Q 038671 173 KVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSL-ELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSN 251 (707)
Q Consensus 173 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~ 251 (707)
+.+++++|.++ .+|..+.. +|++|++++|.+++..+. .+..+++|++|+|++|.|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 67788888776 55554432 777777777777755543 367777777777777777777777777777777777777
Q ss_pred ccccccCchhhhhcccCCeeeecCccCCCCCCcccccccccceEeccccccCCchhHhhccCCCceeEeeccCcccccCC
Q 038671 252 NQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDISYNELHGSIP 331 (707)
Q Consensus 252 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~l~~n~~~~~~~ 331 (707)
|+|++..+..|.++++|+.|+|++|.+++..|..+..+++|+.|++++|++.+..+-.+- ...++...+.++...|.-|
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~-~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWF-AEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHH-HHHHHHHCCSGGGCBBCSS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHH-HHHHHHcCCCCCCCCCCCC
Confidence 777777666677777777777777777766677777777777777777777655432110 1122333344444444433
Q ss_pred CccccccCchhhcccCcCcC
Q 038671 332 NSTAFRDAPMEALQGNKGLC 351 (707)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~c 351 (707)
. .+++.....+..+...|
T Consensus 167 ~--~l~~~~l~~l~~~~~~C 184 (192)
T 1w8a_A 167 S--KVRDVQIKDLPHSEFKC 184 (192)
T ss_dssp T--TTTTSBGGGSCTTTCCC
T ss_pred h--HHcCCChhhCcHhhcCc
Confidence 2 23334444444444444
No 378
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.72 E-value=2.5e-17 Score=154.83 Aligned_cols=133 Identities=24% Similarity=0.326 Sum_probs=84.5
Q ss_pred cEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCc-cccCcccCceEeeecccccccCchhhhhcccCCeeeecC
Q 038671 197 IKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPK-SLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSH 275 (707)
Q Consensus 197 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~-~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 275 (707)
+.|++++|.++ .+|..+. .+|++|++++|.+++..+. .|..+++|++|+|++|++++..+..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 56666666665 3343332 2666666666666655443 366666666666666666666666666666666666666
Q ss_pred ccCCCCCCcccccccccceEeccccccCCchhHhhccCCCceeEeeccCcccccCCC
Q 038671 276 NFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDISYNELHGSIPN 332 (707)
Q Consensus 276 n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~l~~n~~~~~~~~ 332 (707)
|.|++..+..|..+++|+.|++++|+|++..|..+..+++|+.|++++|+|+|.++.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 144 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHL 144 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcc
Confidence 666666666666666666666666666666666666666666666666666666553
No 379
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.70 E-value=1.9e-17 Score=155.55 Aligned_cols=130 Identities=26% Similarity=0.294 Sum_probs=77.1
Q ss_pred EEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccccCcccCceEeeecccccccCchhhhhcccCCeeeecCcc
Q 038671 198 KLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNF 277 (707)
Q Consensus 198 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 277 (707)
.+++++|.++ .+|..+ .++|++|+|++|.|+ .+|..|.++++|+.|+|++|.|++..+..|.++++|++|+|++|.
T Consensus 14 ~l~~~~~~l~-~ip~~~--~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGI--PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCC--CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCC--CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 4444444444 222222 135555555555555 334555566666666666666655555556666666666666666
Q ss_pred CCCCCCcccccccccceEeccccccCCchhHhhccCCCceeEeeccCcccccCC
Q 038671 278 LGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDISYNELHGSIP 331 (707)
Q Consensus 278 l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~l~~n~~~~~~~ 331 (707)
|++..+..|..+++|+.|++++|+|+...+..|..+++|+.|++++|+|.|.+.
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 665555566666666666666666665555556667777777777777777664
No 380
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.70 E-value=4.4e-16 Score=164.34 Aligned_cols=297 Identities=12% Similarity=0.081 Sum_probs=187.7
Q ss_pred eeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeecccccccccCCC
Q 038671 14 SFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRGPIPN 93 (707)
Q Consensus 14 ~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~ 93 (707)
.++.+...+|.++.+|+.+.|.. .++.+...+|.++++|+.++|.++ ++.+...+|.++.+|+.+.+..+-..-...+
T Consensus 58 ~VtsIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~~~a 135 (394)
T 4fs7_A 58 DVVSIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIGVEA 135 (394)
T ss_dssp EEEEECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTTT
T ss_pred eEeEhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeeccee
Confidence 57778888899999999999974 477677788999999999999755 6667788899998888887765422211122
Q ss_pred ----------------------CCCCCCccEEEeccCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEE
Q 038671 94 ----------------------LRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTL 151 (707)
Q Consensus 94 ----------------------l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L 151 (707)
|.++++|+.+.+.++ +..+...+|..+.+|+.+++..+ ++.+...+|.+++.|+.+
T Consensus 136 F~~~~~~~~~~~~~~~~i~~~aF~~c~~L~~i~l~~~-~~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i 213 (394)
T 4fs7_A 136 FKGCDFKEITIPEGVTVIGDEAFATCESLEYVSLPDS-METLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENM 213 (394)
T ss_dssp TTTCCCSEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBC
T ss_pred eecccccccccCccccccchhhhcccCCCcEEecCCc-cceeccccccCCCCceEEEcCCC-ceEeCchhhcccccccee
Confidence 444555555555432 23344445555555555555444 333444455555555555
Q ss_pred EcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccC
Q 038671 152 DFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLS 231 (707)
Q Consensus 152 ~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~ 231 (707)
.+..+... .........+|+.+.+..+. +......|..+..|+.+.+..+... .....|..+..++.+....+.+.
T Consensus 214 ~~~~~~~~--i~~~~~~~~~l~~i~ip~~~-~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~ 289 (394)
T 4fs7_A 214 EFPNSLYY--LGDFALSKTGVKNIIIPDSF-TELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP 289 (394)
T ss_dssp CCCTTCCE--ECTTTTTTCCCCEEEECTTC-CEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC
T ss_pred ecCCCceE--eehhhcccCCCceEEECCCc-eecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec
Confidence 54443322 11122223455555554332 2234455666666666666665443 55556666667776666555432
Q ss_pred CCCCccccCcccCceEeeecccccccCchhhhhcccCCeeeecCccCCCCCCcccccccccceEeccccccCCchhHhhc
Q 038671 232 NSIPKSLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFE 311 (707)
Q Consensus 232 ~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~ 311 (707)
...|..+.+|+.+.+.++ +..+...+|.++.+|+.++|.++ ++.+...+|.++.+|+.+.+..| ++.+...+|.
T Consensus 290 ---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~ 363 (394)
T 4fs7_A 290 ---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQ 363 (394)
T ss_dssp ---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBT
T ss_pred ---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhh
Confidence 345677778888887655 55666777888888888888654 65666777888888888888766 6656667788
Q ss_pred cCCCceeEeeccC
Q 038671 312 ELHGLSYIDISYN 324 (707)
Q Consensus 312 ~~~~L~~l~l~~n 324 (707)
.+.+|+.+++..+
T Consensus 364 ~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 364 GCINLKKVELPKR 376 (394)
T ss_dssp TCTTCCEEEEEGG
T ss_pred CCCCCCEEEECCC
Confidence 8888888877644
No 381
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.70 E-value=1.2e-17 Score=189.19 Aligned_cols=189 Identities=25% Similarity=0.277 Sum_probs=111.8
Q ss_pred EcccccccccCCCCCCCCCCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccc
Q 038671 128 DLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLC 207 (707)
Q Consensus 128 ~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 207 (707)
+++.|.+. +.+..|..+++|+.|+|++|.+. .++..+..+++|+.|+|++|.|+ .+|..|..+++|+.|+|++|.|+
T Consensus 207 ~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~ 283 (727)
T 4b8c_D 207 DDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT 283 (727)
T ss_dssp ----------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS
T ss_pred ccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC
Confidence 33444444 55667788888888888888887 45555668888888888888888 77888888888888888888888
Q ss_pred cCCccccCCCCcccEEEccCCccCCCCCccccCcccCceEeeecccccccCchhhhhccc-CCeeeecCccCCCCCCccc
Q 038671 208 GQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPVELEKLIH-LSELDLSHNFLGEEMPSQI 286 (707)
Q Consensus 208 ~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~-L~~L~l~~n~l~~~~~~~~ 286 (707)
.+|..|..+++|++|+|++|.|+ .+|..|+++++|+.|+|++|++++..+..+..+.. +..|+|++|.+++..|..
T Consensus 284 -~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~- 360 (727)
T 4b8c_D 284 -SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE- 360 (727)
T ss_dssp -SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-
T ss_pred -ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc-
Confidence 66888888888888888888887 55667888888999999999888877777755432 234788888887766654
Q ss_pred ccccccceEecccc--------ccCCchhHhhccCCCceeEeeccCccc
Q 038671 287 CNMQSLEKLNLSHN--------NLSGFIPSCFEELHGLSYIDISYNELH 327 (707)
Q Consensus 287 ~~~~~L~~L~l~~n--------~i~~~~~~~~~~~~~L~~l~l~~n~~~ 327 (707)
|..|++++| .+.+..+..+..+..+....+++|-+.
T Consensus 361 -----l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 361 -----RRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp ----------------------------------------------CCC
T ss_pred -----cceeEeecccccccccCCccccccchhhcccccceeeeeccccc
Confidence 445566666 333333334445555566666666654
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.69 E-value=4e-17 Score=150.13 Aligned_cols=131 Identities=23% Similarity=0.246 Sum_probs=65.9
Q ss_pred CCCCeEECCCCccc-cccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeecccccccccCCC-CCCCCCccEEE
Q 038671 27 KSLSDLELSGNKLC-GSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRGPIPN-LRNLTSLVRVR 104 (707)
Q Consensus 27 ~~L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~-l~~l~~L~~L~ 104 (707)
++|++|++++|+++ +.+|..+.++++|++|+|++|.+++. ..|..+++|++|++++|.+....+. +..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 44555555555554 33444445555555555555555433 4455555555555555555542222 23355555555
Q ss_pred eccCccccccC-ccccCCCCCcEEEcccccccccCC---CCCCCCCCCcEEEcCCCccC
Q 038671 105 LNQNHLTGNIS-ESFGIHPNLAFIDLSHNYFYGEIS---SDWGRCPKLGTLDFSSNNIT 159 (707)
Q Consensus 105 l~~n~l~~~~~-~~~~~~~~L~~L~L~~n~i~~~~~---~~~~~~~~L~~L~L~~n~i~ 159 (707)
+++|+++.+.. ..+..+++|++|++++|.++...+ ..+..+++|++|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 55555554432 445555555555555555554433 34555555555555555554
No 383
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.68 E-value=1.5e-17 Score=169.70 Aligned_cols=143 Identities=12% Similarity=0.140 Sum_probs=101.6
Q ss_pred cCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCc------h-----hhhHH--------HHHHHHHHHhcCCCCc
Q 038671 436 NDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPS------E-----MASQQ--------EFLNEVKTLTGIRHRN 496 (707)
Q Consensus 436 ~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~------~-----~~~~~--------~~~~e~~~l~~l~h~n 496 (707)
.=|++.++||+|++|.||+|..++|+.||||+++..... . ..... ...+|...+.++.+.+
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 348999999999999999999889999999987532110 0 00001 1234566666664443
Q ss_pred eeeeeeeeecCCceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecC
Q 038671 497 IVKFYGFCSHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDL 576 (707)
Q Consensus 497 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~ 576 (707)
+....-+.. ...++||||++|+++..+.. ......++.|++.+|.+||+. |||||||||.|||+++
T Consensus 175 v~vp~p~~~--~~~~LVME~i~G~~L~~l~~---------~~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~ 240 (397)
T 4gyi_A 175 FPVPEPIAQ--SRHTIVMSLVDALPMRQVSS---------VPDPASLYADLIALILRLAKH---GLIHGDFNEFNILIRE 240 (397)
T ss_dssp CSCCCEEEE--ETTEEEEECCSCEEGGGCCC---------CSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEE
T ss_pred CCCCeeeec--cCceEEEEecCCccHhhhcc---------cHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeC
Confidence 322111111 23479999999998865431 223457889999999999999 9999999999999987
Q ss_pred CCC----------eEEeccccceecC
Q 038671 577 ENE----------AHVSDFGTAKFLK 592 (707)
Q Consensus 577 ~~~----------~kl~Dfg~~~~~~ 592 (707)
+|. +.|+||+.+....
T Consensus 241 dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 241 EKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp EECSSCTTSEEEEEEECCCTTCEETT
T ss_pred CCCcccccccccceEEEEeCCcccCC
Confidence 763 8999999987644
No 384
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.68 E-value=7e-18 Score=191.17 Aligned_cols=181 Identities=23% Similarity=0.243 Sum_probs=83.5
Q ss_pred cCCccccCCCCCCeeecccccccccCCCCCCCCCccEEEeccCccccccCccccCCCCCcEEEcccccccccCCCCCCCC
Q 038671 66 AIPKEYGNLVKLTLLTLENNQLRGPIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRC 145 (707)
Q Consensus 66 ~~~~~~~~l~~L~~L~l~~n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~ 145 (707)
..+..|..+++|+.|+|++|.+..++..+..+++|++|+|++|.|+.+ +..|+.+++|++|+|++|.|+ ..+..|..+
T Consensus 215 ~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~~~l~~L~~L~Ls~N~l~~l-p~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l 292 (727)
T 4b8c_D 215 MPKDSKYDDQLWHALDLSNLQIFNISANIFKYDFLTRLYLNGNSLTEL-PAEIKNLSNLRVLDLSHNRLT-SLPAELGSC 292 (727)
T ss_dssp -------CCCCCCEEECTTSCCSCCCGGGGGCCSCSCCBCTTSCCSCC-CGGGGGGTTCCEEECTTSCCS-SCCSSGGGG
T ss_pred cChhhhccCCCCcEEECCCCCCCCCChhhcCCCCCCEEEeeCCcCccc-ChhhhCCCCCCEEeCcCCcCC-ccChhhcCC
Confidence 345555666666666666666665555555566666666666666633 345566666666666666666 335556666
Q ss_pred CCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCC-CCcEEEecCCccccCCccccCCCCcccEEE
Q 038671 146 PKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLS-SLIKLILNSNQLCGQLSLELGSLTQLERLD 224 (707)
Q Consensus 146 ~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 224 (707)
++|++|+|++|.++ .++..|..+++|+.|+|++|.|++.+|..+..+. .+..|+|++|.+++..|. .|+.|+
T Consensus 293 ~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~------~l~~l~ 365 (727)
T 4b8c_D 293 FQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH------ERRFIE 365 (727)
T ss_dssp TTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC------C-----
T ss_pred CCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc------ccceeE
Confidence 66666666666665 4455566666666666666666666665554432 122356667776654443 344555
Q ss_pred ccCC--------ccCCCCCccccCcccCceEeeeccccc
Q 038671 225 LSSN--------RLSNSIPKSLGNLVKLHYLNLSNNQFI 255 (707)
Q Consensus 225 l~~n--------~i~~~~~~~l~~l~~L~~L~l~~n~l~ 255 (707)
++.| .+.+..+..+.++.++....+++|-+.
T Consensus 366 l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 366 INTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp ------------------------------------CCC
T ss_pred eecccccccccCCccccccchhhcccccceeeeeccccc
Confidence 5555 333333444455556666677777654
No 385
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=2.9e-16 Score=144.26 Aligned_cols=134 Identities=23% Similarity=0.218 Sum_probs=90.6
Q ss_pred CCCCCcEEEcccCcCc-ccCCccccCCCCCCeeecccccccccCCCCCCCCCccEEEeccCccccccCccccCCCCCcEE
Q 038671 49 NLTQITFLTLFDNALS-GAIPKEYGNLVKLTLLTLENNQLRGPIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFI 127 (707)
Q Consensus 49 ~l~~L~~L~L~~n~i~-~~~~~~~~~l~~L~~L~l~~n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L 127 (707)
..++|++|++++|.++ +.+|..+..+++|++|++++|.++.+ ..+..+++|++|++++|+++...+..+..+++|++|
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 3467888888888877 45666777778888888888877766 667777777777777777776555556667777777
Q ss_pred EcccccccccCC-CCCCCCCCCcEEEcCCCccCCCCc---hhhhCCCCCCEEeCCCCCCC
Q 038671 128 DLSHNYFYGEIS-SDWGRCPKLGTLDFSSNNITGSMP---AEIIHSSQLKVLDLSSNHIV 183 (707)
Q Consensus 128 ~L~~n~i~~~~~-~~~~~~~~L~~L~L~~n~i~~~~~---~~~~~~~~L~~L~l~~n~l~ 183 (707)
+|++|.++.+.. ..+..+++|+.|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 777777765432 456666666666666666664443 35555666666666666554
No 386
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.65 E-value=1.1e-16 Score=143.84 Aligned_cols=126 Identities=24% Similarity=0.280 Sum_probs=68.2
Q ss_pred CCCceeeccCCeee-ecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeee
Q 038671 3 SNLAFLYLYNNSFS-GSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLT 81 (707)
Q Consensus 3 ~~l~~L~l~~n~i~-~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 81 (707)
++|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..+.++++|++|+|++|.+++.+|..++.+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 34556666666665 45555555566666666666665533 4455556666666666666544555555555555555
Q ss_pred cccccccccC--CCCCCCCCccEEEeccCccccccC---ccccCCCCCcEEEcc
Q 038671 82 LENNQLRGPI--PNLRNLTSLVRVRLNQNHLTGNIS---ESFGIHPNLAFIDLS 130 (707)
Q Consensus 82 l~~n~i~~~~--~~l~~l~~L~~L~l~~n~l~~~~~---~~~~~~~~L~~L~L~ 130 (707)
+++|.++.++ ..+..+++|++|++++|++++.++ ..+..+++|+.|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 5555555432 334555555555555555554443 344444555554443
No 387
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.64 E-value=1.1e-15 Score=143.41 Aligned_cols=126 Identities=24% Similarity=0.299 Sum_probs=81.4
Q ss_pred CeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeecccccccccCC-CCCCCCCccEEEeccC
Q 038671 30 SDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRGPIP-NLRNLTSLVRVRLNQN 108 (707)
Q Consensus 30 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~-~l~~l~~L~~L~l~~n 108 (707)
+.+++++|+++ .+|..+. ++|++|+|++|.|+ .+|..|.++++|++|+|++|.|+.+++ .|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 45566666665 4444332 45666666666665 444566666666666666666665554 3666666666666666
Q ss_pred ccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccC
Q 038671 109 HLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNIT 159 (707)
Q Consensus 109 ~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~ 159 (707)
+++.+.+..|..+++|++|+|++|.++.+.+..|..+++|+.|+|++|.+.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 666666666777777777777777777666666777777777777777765
No 388
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.64 E-value=9.3e-15 Score=154.13 Aligned_cols=304 Identities=11% Similarity=0.042 Sum_probs=242.5
Q ss_pred CCCCCceeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccC-------------------
Q 038671 1 NLSNLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDN------------------- 61 (707)
Q Consensus 1 nl~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n------------------- 61 (707)
++++|+.+.|..+ ++.+...+|.++++|+.++|..+ ++.+...+|.++++|+.+.+..+
T Consensus 69 ~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~~~~~~~~~~ 146 (394)
T 4fs7_A 69 GCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIGVEAFKGCDFKEITI 146 (394)
T ss_dssp TCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTTTTTTCCCSEEEC
T ss_pred CCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeecceeeeccccccccc
Confidence 4678999999854 77788889999999999999865 66567778888888887766432
Q ss_pred --cCcccCCccccCCCCCCeeecccccccccCCCCCCCCCccEEEeccCccccccCccccCCCCCcEEEcccccccccCC
Q 038671 62 --ALSGAIPKEYGNLVKLTLLTLENNQLRGPIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEIS 139 (707)
Q Consensus 62 --~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~ 139 (707)
.+......+|.++.+|+.+.+.++...-....|.++.+|+.+.+..+ ++.+...+|..+..|+.+.+..+... +.
T Consensus 147 ~~~~~~i~~~aF~~c~~L~~i~l~~~~~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~-i~- 223 (394)
T 4fs7_A 147 PEGVTVIGDEAFATCESLEYVSLPDSMETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY-LG- 223 (394)
T ss_dssp CTTCCEECTTTTTTCTTCCEEECCTTCCEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE-EC-
T ss_pred CccccccchhhhcccCCCcEEecCCccceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE-ee-
Confidence 22223456788899999999987654423346999999999999876 77788999999999999999887654 33
Q ss_pred CCCCCCCCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCc
Q 038671 140 SDWGRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQ 219 (707)
Q Consensus 140 ~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 219 (707)
..+....+|+.+.+..+ ++.+....+..+..|+.+.+..+... .....|..+..++.+....+.+. ...|..+.+
T Consensus 224 ~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~ 298 (394)
T 4fs7_A 224 DFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSS 298 (394)
T ss_dssp TTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTT
T ss_pred hhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---ccccccccc
Confidence 34455678999999755 44467788899999999999988655 77788999999999998877654 456889999
Q ss_pred ccEEEccCCccCCCCCccccCcccCceEeeecccccccCchhhhhcccCCeeeecCccCCCCCCcccccccccceEeccc
Q 038671 220 LERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSH 299 (707)
Q Consensus 220 L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~ 299 (707)
|+.+.+..+ ++.+...+|.++.+|+.++|.++ ++.+...+|.++.+|+.+++..| ++.+...+|.++.+|+.+++..
T Consensus 299 L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~ 375 (394)
T 4fs7_A 299 LTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPK 375 (394)
T ss_dssp CCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEG
T ss_pred ccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECC
Confidence 999999765 66677889999999999999755 77788899999999999999877 7677888999999999999976
Q ss_pred cccCCchhHhhccCCCceeE
Q 038671 300 NNLSGFIPSCFEELHGLSYI 319 (707)
Q Consensus 300 n~i~~~~~~~~~~~~~L~~l 319 (707)
+ +. .....|..+.+|+.+
T Consensus 376 ~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 376 R-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp G-GG-GGGGGBCTTCEEEEE
T ss_pred C-CE-EhhheecCCCCCcEE
Confidence 6 33 234567777877765
No 389
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.64 E-value=1.9e-14 Score=151.69 Aligned_cols=301 Identities=12% Similarity=0.115 Sum_probs=199.2
Q ss_pred eeeecCCccccCCC-CCCeEECCCCccccccCcCccCCCCCcEEEcccCc---CcccCCccccCCCCCCeeecccccccc
Q 038671 14 SFSGSIPSEIGRLK-SLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNA---LSGAIPKEYGNLVKLTLLTLENNQLRG 89 (707)
Q Consensus 14 ~i~~~~~~~~~~l~-~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~---i~~~~~~~~~~l~~L~~L~l~~n~i~~ 89 (707)
.++.+...+|.+++ .|+.+.|..+ ++.+...+|.++++|+.+.+..|. ++.+...+|.++.+|+.+.+.++ +..
T Consensus 50 ~Vt~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~ 127 (394)
T 4gt6_A 50 PVSKIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTE 127 (394)
T ss_dssp EEEEECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSE
T ss_pred eeeEcCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cce
Confidence 35666677888774 5999999764 666788899999999999998764 77677888999999999888766 333
Q ss_pred cC-CCCCCCCCccEEEeccCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccCCCCchhhhC
Q 038671 90 PI-PNLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITGSMPAEIIH 168 (707)
Q Consensus 90 ~~-~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~ 168 (707)
+. ..|..+.+|+.+.+.. .+..+...+|..+.+|+.+.+..+ ++.+...+|.. .+|+.+.+..+-.. ....+|..
T Consensus 128 I~~~aF~~c~~L~~i~lp~-~~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i~~~af~~ 203 (394)
T 4gt6_A 128 IDSEAFHHCEELDTVTIPE-GVTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-IGTNAFSE 203 (394)
T ss_dssp ECTTTTTTCTTCCEEECCT-TCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-ECTTTTTT
T ss_pred ehhhhhhhhcccccccccc-eeeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc-cccchhhh
Confidence 33 3588899999999964 456688888999999999998765 55577777764 57888888765433 66677777
Q ss_pred CCCCCEEeCCCCCCCCCCChhh--------------hCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCC
Q 038671 169 SSQLKVLDLSSNHIVGEMPSKL--------------GKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSI 234 (707)
Q Consensus 169 ~~~L~~L~l~~n~l~~~~~~~~--------------~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~ 234 (707)
+..++......+.... ....+ .....+..+.+. +.++.....+|..+.+|+.+.+..+... +.
T Consensus 204 c~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~ 280 (394)
T 4gt6_A 204 CFALSTITSDSESYPA-IDNVLYEKSANGDYALIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVVS-IG 280 (394)
T ss_dssp CTTCCEEEECCSSSCB-SSSCEEEECTTSCEEEEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCCE-EC
T ss_pred ccccceeccccccccc-ccceeecccccccccccccccccccceEEcC-CcceEcccceeeecccccEEecccccce-ec
Confidence 7777777666554331 11111 111223333332 2233344556666677777766544332 55
Q ss_pred CccccCcccCceEeeecccccccCchhhhhcccCCeeeecCccCCCCCCcccccccccceEeccccccCCchhHhhccCC
Q 038671 235 PKSLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELH 314 (707)
Q Consensus 235 ~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~ 314 (707)
..+|.++++|+.+.+. +.++.+...+|.++.+|+.++|.++ ++.+...+|.++.+|+.+.+..+ ++.+....|..+.
T Consensus 281 ~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~ 357 (394)
T 4gt6_A 281 TGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCT 357 (394)
T ss_dssp TTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCT
T ss_pred CcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCC
Confidence 5666666677777664 3345555666666777777776543 44555566666777777776543 5545556666677
Q ss_pred CceeEeeccCcc
Q 038671 315 GLSYIDISYNEL 326 (707)
Q Consensus 315 ~L~~l~l~~n~~ 326 (707)
+|+.+++.+|..
T Consensus 358 ~L~~i~~~~~~~ 369 (394)
T 4gt6_A 358 ALNNIEYSGSRS 369 (394)
T ss_dssp TCCEEEESSCHH
T ss_pred CCCEEEECCcee
Confidence 777777666543
No 390
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.63 E-value=1e-15 Score=141.99 Aligned_cols=113 Identities=28% Similarity=0.298 Sum_probs=55.9
Q ss_pred cccEEEccCCccCCCCCccccCcccCceEeeecccccccCchhhhhcccCCeeeecCccCCCCCCcccccccccceEecc
Q 038671 219 QLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLS 298 (707)
Q Consensus 219 ~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~ 298 (707)
+|+.|++++|.+++..+..|.++++|++|++++|.+++..+..|..+++|+.|++++|.+++..+..+..+++|+.|+++
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 108 (177)
T 2o6r_A 29 SATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALD 108 (177)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECc
Confidence 44444444444444433444444444444444444444444444445555555555555544444444555555555555
Q ss_pred ccccCCchhHhhccCCCceeEeeccCcccccCC
Q 038671 299 HNNLSGFIPSCFEELHGLSYIDISYNELHGSIP 331 (707)
Q Consensus 299 ~n~i~~~~~~~~~~~~~L~~l~l~~n~~~~~~~ 331 (707)
+|++++..+..+..+++|+.|++++|+|.|.++
T Consensus 109 ~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 109 TNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 555554444444555555555555555555544
No 391
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.61 E-value=1e-15 Score=137.49 Aligned_cols=127 Identities=26% Similarity=0.325 Sum_probs=78.0
Q ss_pred CCCcEEEecCCccc-cCCccccCCCCcccEEEccCCccCCCCCccccCcccCceEeeecccccccCchhhhhcccCCeee
Q 038671 194 SSLIKLILNSNQLC-GQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELD 272 (707)
Q Consensus 194 ~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 272 (707)
++|++|++++|.++ +..+..+..+++|++|++++|.+++. ..++.+++|++|++++|.+++..+..+..+++|+.|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 45555555555555 34444555566666666666666544 4556666666666666666555555566666666666
Q ss_pred ecCccCCCC-CCcccccccccceEeccccccCCchh---HhhccCCCceeEeec
Q 038671 273 LSHNFLGEE-MPSQICNMQSLEKLNLSHNNLSGFIP---SCFEELHGLSYIDIS 322 (707)
Q Consensus 273 l~~n~l~~~-~~~~~~~~~~L~~L~l~~n~i~~~~~---~~~~~~~~L~~l~l~ 322 (707)
+++|.+++. .+..+..+++|+.|++++|++++..+ ..+..+++|+.|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 666666542 23556666777777777777765544 456667777777665
No 392
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.61 E-value=7.5e-16 Score=142.63 Aligned_cols=133 Identities=20% Similarity=0.252 Sum_probs=80.5
Q ss_pred ccCCCCCCeEECCCCccccccCcCccCCC-CCcEEEcccCcCcccCCccccCCCCCCeeecccccccccCCCC-CCCCCc
Q 038671 23 IGRLKSLSDLELSGNKLCGSIPHSLGNLT-QITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRGPIPNL-RNLTSL 100 (707)
Q Consensus 23 ~~~l~~L~~L~l~~n~i~~~~~~~~~~l~-~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~l-~~l~~L 100 (707)
+..+.+|++|++++|+++ .++. +..+. +|++|+|++|.|++. ..|+.+++|++|++++|.++.+++.+ ..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 445566666666666666 3333 33333 666666666666644 45666666666666666666655443 566666
Q ss_pred cEEEeccCccccccC-ccccCCCCCcEEEcccccccccCCC---CCCCCCCCcEEEcCCCccC
Q 038671 101 VRVRLNQNHLTGNIS-ESFGIHPNLAFIDLSHNYFYGEISS---DWGRCPKLGTLDFSSNNIT 159 (707)
Q Consensus 101 ~~L~l~~n~l~~~~~-~~~~~~~~L~~L~L~~n~i~~~~~~---~~~~~~~L~~L~L~~n~i~ 159 (707)
++|++++|+++.++. ..+..+++|+.|++++|.++.+... .+..+++|+.|++++|.+.
T Consensus 91 ~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 91 TELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 666666666655443 3566666777777777766644322 3566677777777766654
No 393
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.61 E-value=5.4e-15 Score=137.03 Aligned_cols=133 Identities=28% Similarity=0.282 Sum_probs=97.5
Q ss_pred CCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccccCcccCceEeeec
Q 038671 172 LKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSN 251 (707)
Q Consensus 172 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~ 251 (707)
.+.+++++|.++ .+|..+ .++|++|++++|++++..+..+..+++|++|++++|.+++..+..|.++++|++|++++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 355666666665 333322 25677777777777766666677777788888888887766666777788888888888
Q ss_pred ccccccCchhhhhcccCCeeeecCccCCCCCCcccccccccceEeccccccCCchh
Q 038671 252 NQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIP 307 (707)
Q Consensus 252 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~ 307 (707)
|.+++..+..+..+++|+.|++++|.+++..+..+..+++|+.|++++|++.+..+
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 88877766677788888888888888876666667778888888888888887654
No 394
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.59 E-value=5.3e-14 Score=148.35 Aligned_cols=311 Identities=11% Similarity=0.108 Sum_probs=236.6
Q ss_pred CCceeeccCCeeeecCCccccCCCCCCeEECCCCc---cccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCee
Q 038671 4 NLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNK---LCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLL 80 (707)
Q Consensus 4 ~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~---i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 80 (707)
.|+.+.|..+ ++.+...+|.++.+|+.+.+..|. ++.+...+|.++.+|+.+.+.++ ++.+...+|..+.+|+.+
T Consensus 65 ~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i 142 (394)
T 4gt6_A 65 VLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTV 142 (394)
T ss_dssp CCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEE
T ss_pred cCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhcccccc
Confidence 4899999875 777889999999999999998763 77677889999999999988765 555778899999999999
Q ss_pred ecccccccccCCCCCCCCCccEEEeccCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccCC
Q 038671 81 TLENNQLRGPIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITG 160 (707)
Q Consensus 81 ~l~~n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~ 160 (707)
.+..+...-....+..+.+|+.+.+..+ ++.+...+|.. .+|+.+.+..+... +...+|..+.++.......+....
T Consensus 143 ~lp~~~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i~~~af~~c~~l~~~~~~~~~~~~ 219 (394)
T 4gt6_A 143 TIPEGVTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-IGTNAFSECFALSTITSDSESYPA 219 (394)
T ss_dssp ECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-ECTTTTTTCTTCCEEEECCSSSCB
T ss_pred cccceeeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc-cccchhhhccccceeccccccccc
Confidence 9986544423346899999999999764 77788888865 67999999876544 778899999999999887766542
Q ss_pred CCchhhh-------------CCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccC
Q 038671 161 SMPAEII-------------HSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSS 227 (707)
Q Consensus 161 ~~~~~~~-------------~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 227 (707)
.....+. ....+..+.+.. .+......+|..+..|+.+.+..+... ....+|.++++|+.+.+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~-~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~- 296 (394)
T 4gt6_A 220 IDNVLYEKSANGDYALIRYPSQREDPAFKIPN-GVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS- 296 (394)
T ss_dssp SSSCEEEECTTSCEEEEECCTTCCCSEEECCT-TEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-
T ss_pred ccceeecccccccccccccccccccceEEcCC-cceEcccceeeecccccEEecccccce-ecCcccccccccccccCC-
Confidence 2221111 223445555543 334456678899999999999876654 777889999999999996
Q ss_pred CccCCCCCccccCcccCceEeeecccccccCchhhhhcccCCeeeecCccCCCCCCcccccccccceEeccccccCCchh
Q 038671 228 NRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIP 307 (707)
Q Consensus 228 n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~ 307 (707)
+.++.+...+|.++.+|+.+.|.++ ++.+...+|.++.+|+++.|.++ ++.+...+|.++.+|+.+++.+|... -
T Consensus 297 ~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~---~ 371 (394)
T 4gt6_A 297 SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQ---W 371 (394)
T ss_dssp TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHH---H
T ss_pred CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceee---h
Confidence 5666677889999999999999865 66778889999999999999765 66777889999999999999998653 2
Q ss_pred HhhccCCCceeEeeccCccc
Q 038671 308 SCFEELHGLSYIDISYNELH 327 (707)
Q Consensus 308 ~~~~~~~~L~~l~l~~n~~~ 327 (707)
..+....+|+.+.+..|.++
T Consensus 372 ~~~~~~~~L~~i~i~~~~~~ 391 (394)
T 4gt6_A 372 NAISTDSGLQNLPVAPGSID 391 (394)
T ss_dssp HTCBCCCCC-----------
T ss_pred hhhhccCCCCEEEeCCCCEE
Confidence 56677788999888776543
No 395
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.56 E-value=3.7e-15 Score=137.91 Aligned_cols=106 Identities=25% Similarity=0.268 Sum_probs=52.0
Q ss_pred CCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCcc--ccCCCCcccEEE
Q 038671 147 KLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSL--ELGSLTQLERLD 224 (707)
Q Consensus 147 ~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~--~~~~l~~L~~L~ 224 (707)
+|++|+|++|.+++. ..+..+++|++|++++|.|++..+..|..+++|++|++++|.++. .+. .+..+++|+.|+
T Consensus 43 ~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~ 119 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVE-LGDLDPLASLKSLTYLC 119 (176)
T ss_dssp CCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCCC-GGGGGGGGGCTTCCEEE
T ss_pred CCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCCc-chhhHhhhcCCCCCEEE
Confidence 344444444443322 233344444444444444443333333445555555555555542 222 455566666666
Q ss_pred ccCCccCCCCCc---cccCcccCceEeeeccccc
Q 038671 225 LSSNRLSNSIPK---SLGNLVKLHYLNLSNNQFI 255 (707)
Q Consensus 225 l~~n~i~~~~~~---~l~~l~~L~~L~l~~n~l~ 255 (707)
+++|.++..... .+..+++|+.|++++|.+.
T Consensus 120 l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 120 ILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred ecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 666666533221 3666677777777777654
No 396
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.55 E-value=4.1e-17 Score=154.42 Aligned_cols=151 Identities=21% Similarity=0.199 Sum_probs=81.5
Q ss_pred CCCCeEECCCCccccccCc------CccCCCCCcEEEcccCcCcccCCccccCCCCCCeeecccccccccCCCCCCCCCc
Q 038671 27 KSLSDLELSGNKLCGSIPH------SLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRGPIPNLRNLTSL 100 (707)
Q Consensus 27 ~~L~~L~l~~n~i~~~~~~------~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~l~~l~~L 100 (707)
..++.++++.+.+.+..|. .|.++++|++|+|++|.+++ +| .+..+++|++|++++|.++.++..+..+++|
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~l~~~~~~~~~L 95 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKKIENLDAVADTL 95 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECSCSSHHHHHHHC
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcccccchhhcCCcC
Confidence 3444444444444433333 45555555555555555553 33 5555555555555555555444434444556
Q ss_pred cEEEeccCccccccCccccCCCCCcEEEcccccccccCC-CCCCCCCCCcEEEcCCCccCCCCch----------hhhCC
Q 038671 101 VRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEIS-SDWGRCPKLGTLDFSSNNITGSMPA----------EIIHS 169 (707)
Q Consensus 101 ~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~-~~~~~~~~L~~L~L~~n~i~~~~~~----------~~~~~ 169 (707)
++|++++|++++++ .+..+++|++|++++|.++.+.. ..+..+++|++|++++|.+++..+. .+..+
T Consensus 96 ~~L~L~~N~l~~l~--~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l 173 (198)
T 1ds9_A 96 EELWISYNQIASLS--GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRL 173 (198)
T ss_dssp SEEEEEEEECCCHH--HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHC
T ss_pred CEEECcCCcCCcCC--ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhC
Confidence 66666666555543 35555666666666666654322 3455666666666666666533222 35667
Q ss_pred CCCCEEeCCCCCCC
Q 038671 170 SQLKVLDLSSNHIV 183 (707)
Q Consensus 170 ~~L~~L~l~~n~l~ 183 (707)
++|+.|+ +|.++
T Consensus 174 ~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 174 PNLKKLD--GMPVD 185 (198)
T ss_dssp SSCSEEC--CGGGT
T ss_pred CCcEEEC--CcccC
Confidence 7777775 55554
No 397
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.55 E-value=1.8e-16 Score=149.91 Aligned_cols=152 Identities=23% Similarity=0.263 Sum_probs=104.0
Q ss_pred CCCCCEEeCCCCCCCCCCCh------hhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccccCcc
Q 038671 169 SSQLKVLDLSSNHIVGEMPS------KLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLV 242 (707)
Q Consensus 169 ~~~L~~L~l~~n~l~~~~~~------~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~ 242 (707)
...++.++++.+.+.+..|. .+..+++|++|++++|.+++ .+ .+..+++|++|++++|.++ .+|..+..++
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~ 93 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVAD 93 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHH
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCC
Confidence 34445555555555444443 67777777777777777774 44 6677777778888777777 4555666677
Q ss_pred cCceEeeecccccccCchhhhhcccCCeeeecCccCCCCCC-cccccccccceEeccccccCCchhH----------hhc
Q 038671 243 KLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMP-SQICNMQSLEKLNLSHNNLSGFIPS----------CFE 311 (707)
Q Consensus 243 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~~~~L~~L~l~~n~i~~~~~~----------~~~ 311 (707)
+|++|++++|++++. + .+..+++|+.|++++|.+++..+ ..+..+++|+.|++++|++.+..|. .+.
T Consensus 94 ~L~~L~L~~N~l~~l-~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~ 171 (198)
T 1ds9_A 94 TLEELWISYNQIASL-S-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVK 171 (198)
T ss_dssp HCSEEEEEEEECCCH-H-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHH
T ss_pred cCCEEECcCCcCCcC-C-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHH
Confidence 888888888887653 2 57777888888888888855322 3567778888888888888655443 367
Q ss_pred cCCCceeEeeccCccc
Q 038671 312 ELHGLSYIDISYNELH 327 (707)
Q Consensus 312 ~~~~L~~l~l~~n~~~ 327 (707)
.+++|+.|+ +|+++
T Consensus 172 ~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 172 RLPNLKKLD--GMPVD 185 (198)
T ss_dssp HCSSCSEEC--CGGGT
T ss_pred hCCCcEEEC--CcccC
Confidence 788888776 66654
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.48 E-value=6.9e-14 Score=128.25 Aligned_cols=109 Identities=25% Similarity=0.348 Sum_probs=64.4
Q ss_pred cEEEccCCccCCCCCccccCcccCceEeeecccccccCchhhhhcccCCeeeecCccCCCCCCcccccccccceEecccc
Q 038671 221 ERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHN 300 (707)
Q Consensus 221 ~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n 300 (707)
+.|++++|.++. +|..+. ++|++|+|++|.|++..+..|..+++|+.|+|++|.|++..+..|..+++|+.|++++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 455555555553 333332 45566666666665555555666666666666666665555555566666666666666
Q ss_pred ccCCchhHhhccCCCceeEeeccCcccccCCC
Q 038671 301 NLSGFIPSCFEELHGLSYIDISYNELHGSIPN 332 (707)
Q Consensus 301 ~i~~~~~~~~~~~~~L~~l~l~~n~~~~~~~~ 332 (707)
+|++..+..|..+++|+.|++++|+|+|.++.
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~ 120 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACSD 120 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBGG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCchh
Confidence 66655555566666666666666666666653
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.45 E-value=1.3e-13 Score=126.85 Aligned_cols=90 Identities=24% Similarity=0.300 Sum_probs=45.1
Q ss_pred ccCceEeeecccccccCchhhhhcccCCeeeecCccCCCCCCcccccccccceEeccccccCCchhHhhccCCCceeEee
Q 038671 242 VKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDI 321 (707)
Q Consensus 242 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~l 321 (707)
++|+.|+|++|+|.+..+..|.++++|+.|+|++|.|++..+..|..+++|+.|++++|+|++..+..+..+++|+.|++
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L 112 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYL 112 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEe
Confidence 34444444444444444444444555555555555554443334445555555555555555444444555555555555
Q ss_pred ccCcccccCC
Q 038671 322 SYNELHGSIP 331 (707)
Q Consensus 322 ~~n~~~~~~~ 331 (707)
++|+|.|.++
T Consensus 113 ~~N~~~c~~~ 122 (174)
T 2r9u_A 113 YNNPWDCECR 122 (174)
T ss_dssp CSSCBCTTBG
T ss_pred CCCCcccccc
Confidence 5555555544
No 400
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.45 E-value=9.3e-12 Score=130.50 Aligned_cols=288 Identities=13% Similarity=0.061 Sum_probs=172.1
Q ss_pred ccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeecccccccccCC-CCCCCCCcc
Q 038671 23 IGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRGPIP-NLRNLTSLV 101 (707)
Q Consensus 23 ~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~-~l~~l~~L~ 101 (707)
+....+|+.+.+.. .++.+...+|.++.+|+.+.|..+ ++.+...+|.+. +|+.+.+..+ +..+.. +|.. .+|+
T Consensus 42 ~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~ 116 (379)
T 4h09_A 42 YKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLD 116 (379)
T ss_dssp GGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCS
T ss_pred cccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcc
Confidence 44455777777764 355566677777788888877543 565667777776 5777766544 333333 3444 3677
Q ss_pred EEEeccCccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCCCccCC------------CCchhhhCC
Q 038671 102 RVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSSNNITG------------SMPAEIIHS 169 (707)
Q Consensus 102 ~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~n~i~~------------~~~~~~~~~ 169 (707)
.+.+..+ ++.+...+|..+ +|+.+.+..+ ++.+...+|..+.+++.+.+..+.... .....+...
T Consensus 117 ~i~lp~~-~~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (379)
T 4h09_A 117 DFEFPGA-TTEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAA 193 (379)
T ss_dssp EEECCTT-CCEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTT
T ss_pred cccCCCc-cccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceecccccc
Confidence 7777654 444556666554 5666655543 344666677777777777766544321 112223334
Q ss_pred CCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCccCCCCCccccCcccCceEee
Q 038671 170 SQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRLSNSIPKSLGNLVKLHYLNL 249 (707)
Q Consensus 170 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l 249 (707)
..+..+.+..+... .....+....+|+.+.+..+ ++......+..+..|+.+.+..+ ++.+...+|.++.+|+.+.+
T Consensus 194 ~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l 270 (379)
T 4h09_A 194 KTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNF 270 (379)
T ss_dssp CCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEE
T ss_pred ccccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhccccc
Confidence 45555555443322 44455566666766666544 33355556666677777777654 44455566666677777776
Q ss_pred ecccccccCchhhhhcccCCeeeecCccCCCCCCcccccccccceEeccccccCCchhHhhccCCCceeEeecc
Q 038671 250 SNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDISY 323 (707)
Q Consensus 250 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~l~~ 323 (707)
..+ +..+....|.++.+|+.+.+.++.++.+...+|.++.+|+.+.+..+ ++.+...+|..+.+|+.+.+..
T Consensus 271 ~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~ 342 (379)
T 4h09_A 271 YAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPK 342 (379)
T ss_dssp CCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCT
T ss_pred ccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECC
Confidence 543 44555566677777777777666665566666777777777777543 4444456666667777666644
No 401
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.43 E-value=4.8e-13 Score=122.62 Aligned_cols=103 Identities=29% Similarity=0.331 Sum_probs=56.0
Q ss_pred ceeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeecccc
Q 038671 6 AFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLENN 85 (707)
Q Consensus 6 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n 85 (707)
+.|++++|.++ .+|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 12 ~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 45555666555 3444442 45555555555555555555555555555555555555554555555555555555555
Q ss_pred cccccCCC-CCCCCCccEEEeccCccc
Q 038671 86 QLRGPIPN-LRNLTSLVRVRLNQNHLT 111 (707)
Q Consensus 86 ~i~~~~~~-l~~l~~L~~L~l~~n~l~ 111 (707)
+|+.+++. +..+++|+.|+|++|.+.
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 55554442 445555555555555544
No 402
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.42 E-value=6e-13 Score=122.36 Aligned_cols=103 Identities=26% Similarity=0.330 Sum_probs=51.1
Q ss_pred CeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeecccccccccCCC-CCCCCCccEEEeccC
Q 038671 30 SDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLRGPIPN-LRNLTSLVRVRLNQN 108 (707)
Q Consensus 30 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~-l~~l~~L~~L~l~~n 108 (707)
+.+++++|+++ .+|..+. ++|++|+|++|.|++..|..|.++++|++|+|++|+|+.+++. |..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 34455555444 3333332 4455555555555544444455555555555555555544443 344555555555555
Q ss_pred ccccccCccccCCCCCcEEEccccccc
Q 038671 109 HLTGNISESFGIHPNLAFIDLSHNYFY 135 (707)
Q Consensus 109 ~l~~~~~~~~~~~~~L~~L~L~~n~i~ 135 (707)
+++.+++..|..+++|++|+|++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 555554444555555555555555544
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.41 E-value=8.3e-15 Score=152.13 Aligned_cols=96 Identities=24% Similarity=0.262 Sum_probs=50.3
Q ss_pred CCcccEEEccCCccCCC----CCccccCcccCceEeeecccccccC----chhhhhcccCCeeeecCccCCCCCC----c
Q 038671 217 LTQLERLDLSSNRLSNS----IPKSLGNLVKLHYLNLSNNQFIKKI----PVELEKLIHLSELDLSHNFLGEEMP----S 284 (707)
Q Consensus 217 l~~L~~L~l~~n~i~~~----~~~~l~~l~~L~~L~l~~n~l~~~~----~~~~~~l~~L~~L~l~~n~l~~~~~----~ 284 (707)
.++|++|+|++|.|++. .+..+..+++|++|+|++|.|++.. ...+...++|++|+|++|.|++... .
T Consensus 154 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~ 233 (372)
T 3un9_A 154 QCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALAR 233 (372)
T ss_dssp TCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHH
T ss_pred CCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHH
Confidence 34555555555555432 2223344555666666666655432 2334455566666666666644222 2
Q ss_pred ccccccccceEeccccccCCchhHhhcc
Q 038671 285 QICNMQSLEKLNLSHNNLSGFIPSCFEE 312 (707)
Q Consensus 285 ~~~~~~~L~~L~l~~n~i~~~~~~~~~~ 312 (707)
.+...++|+.|+|++|+|++.....+..
T Consensus 234 ~L~~~~~L~~L~Ls~N~i~~~g~~~L~~ 261 (372)
T 3un9_A 234 AAREHPSLELLHLYFNELSSEGRQVLRD 261 (372)
T ss_dssp HHHHCSSCCEEECTTSSCCHHHHHHHHH
T ss_pred HHHhCCCCCEEeccCCCCCHHHHHHHHH
Confidence 2334466777777777766554444443
No 404
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.38 E-value=1e-14 Score=151.45 Aligned_cols=110 Identities=20% Similarity=0.159 Sum_probs=54.1
Q ss_pred CCCcEEEecCCccccC----CccccCCCCcccEEEccCCccCCCC----CccccCcccCceEeeecccccccCch----h
Q 038671 194 SSLIKLILNSNQLCGQ----LSLELGSLTQLERLDLSSNRLSNSI----PKSLGNLVKLHYLNLSNNQFIKKIPV----E 261 (707)
Q Consensus 194 ~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~n~i~~~~----~~~l~~l~~L~~L~l~~n~l~~~~~~----~ 261 (707)
++|++|+|++|.++.. ++..+..+++|++|+|++|.|++.. +..+...++|+.|+|++|.|++.... .
T Consensus 155 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~ 234 (372)
T 3un9_A 155 CQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARA 234 (372)
T ss_dssp CCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHH
T ss_pred CccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHH
Confidence 4455555555555422 1222344555666666666554322 33444555666666666666543322 2
Q ss_pred hhhcccCCeeeecCccCCCCCCccccccc-----ccceEe--ccccccC
Q 038671 262 LEKLIHLSELDLSHNFLGEEMPSQICNMQ-----SLEKLN--LSHNNLS 303 (707)
Q Consensus 262 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~~-----~L~~L~--l~~n~i~ 303 (707)
+..+++|++|+|++|.|++.....+..+. .|+.+. +..|.+.
T Consensus 235 L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 235 AREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp HHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CH
T ss_pred HHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccC
Confidence 34456677777777776554333333321 155555 5555554
No 405
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.37 E-value=3.8e-11 Score=125.81 Aligned_cols=298 Identities=12% Similarity=0.063 Sum_probs=223.2
Q ss_pred CCCceeeccCCeeeecCCccccCCCCCCeEECCCCccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeec
Q 038671 3 SNLAFLYLYNNSFSGSIPSEIGRLKSLSDLELSGNKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTL 82 (707)
Q Consensus 3 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l 82 (707)
.+|+.+.+.. .++.+...+|.++.+|+.+.|..+ ++.+...+|.++ +|+.+.+..+ ++.+...+|... +|+.+.+
T Consensus 46 ~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~-~L~~i~l 120 (379)
T 4h09_A 46 DRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGT-DLDDFEF 120 (379)
T ss_dssp GGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTTC-CCSEEEC
T ss_pred cCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceeccC-CcccccC
Confidence 4577777764 467688889999999999999754 666777889887 6888887654 555667778764 8999999
Q ss_pred ccccccccCCCCCCCCCccEEEeccCccccccCccccCCCCCcEEEccccccccc------------CCCCCCCCCCCcE
Q 038671 83 ENNQLRGPIPNLRNLTSLVRVRLNQNHLTGNISESFGIHPNLAFIDLSHNYFYGE------------ISSDWGRCPKLGT 150 (707)
Q Consensus 83 ~~n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~------------~~~~~~~~~~L~~ 150 (707)
..+...-....|.++ +|+.+.+.. .++.+...+|..+.+++.+.+..+..... ....+..+..+..
T Consensus 121 p~~~~~i~~~~F~~~-~l~~~~~~~-~v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (379)
T 4h09_A 121 PGATTEIGNYIFYNS-SVKRIVIPK-SVTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTE 198 (379)
T ss_dssp CTTCCEECTTTTTTC-CCCEEEECT-TCCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSE
T ss_pred CCccccccccccccc-eeeeeeccc-eeeccccchhcccccccccccccccceeecccceecccccceeccccccccccc
Confidence 876443222345544 677777654 46668888899999999988876544311 1234556667777
Q ss_pred EEcCCCccCCCCchhhhCCCCCCEEeCCCCCCCCCCChhhhCCCCCcEEEecCCccccCCccccCCCCcccEEEccCCcc
Q 038671 151 LDFSSNNITGSMPAEIIHSSQLKVLDLSSNHIVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNRL 230 (707)
Q Consensus 151 L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i 230 (707)
+.+...... .....+....+|+.+.+..+ +.......|..+..|+.+.+..+ ++.....+|..+.+|+.+.+..+ +
T Consensus 199 ~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i 274 (379)
T 4h09_A 199 FTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-V 274 (379)
T ss_dssp EECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-C
T ss_pred cccccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-c
Confidence 777655433 56667778889999998766 44466778888999999999876 66677788899999999999754 6
Q ss_pred CCCCCccccCcccCceEeeecccccccCchhhhhcccCCeeeecCccCCCCCCcccccccccceEeccccccCCchhHhh
Q 038671 231 SNSIPKSLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHNFLGEEMPSQICNMQSLEKLNLSHNNLSGFIPSCF 310 (707)
Q Consensus 231 ~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~ 310 (707)
+.+....|.++.+|+.+.+.++.++.+...+|.++.+|+.+.|.++ ++.+...+|.++.+|+.+.+..+ ++.+...+|
T Consensus 275 ~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF 352 (379)
T 4h09_A 275 KTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAF 352 (379)
T ss_dssp SEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTT
T ss_pred eeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHh
Confidence 5577788999999999999988888888889999999999999765 66677788999999999988665 554445566
Q ss_pred ccC
Q 038671 311 EEL 313 (707)
Q Consensus 311 ~~~ 313 (707)
..+
T Consensus 353 ~~c 355 (379)
T 4h09_A 353 EGS 355 (379)
T ss_dssp TTS
T ss_pred hCC
Confidence 554
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.29 E-value=8.8e-12 Score=123.48 Aligned_cols=147 Identities=12% Similarity=0.065 Sum_probs=114.0
Q ss_pred HHHhcCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCC-CCceeeeeeeeecCCce
Q 038671 432 IRVTNDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR-HRNIVKFYGFCSHARHS 510 (707)
Q Consensus 432 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~ 510 (707)
....+.|++....+.|+.+.||+++.. ++.+++|+....... ....+.+|+++++.+. +..++++++++...+..
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~---~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~ 85 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKG---TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWS 85 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTT---STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEE
T ss_pred HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCC---CHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCce
Confidence 345567888888999999999999764 678999997542111 1234778999998884 67888999999988899
Q ss_pred eEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCC--------------------------------
Q 038671 511 FIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDC-------------------------------- 558 (707)
Q Consensus 511 ~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-------------------------------- 558 (707)
|+||||++|.++.+.+. +......++.+++++++.||+..
T Consensus 86 ~lv~e~i~G~~l~~~~~--------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (263)
T 3tm0_A 86 NLLMSEADGVLCSEEYE--------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCEN 157 (263)
T ss_dssp EEEEECCSSEEHHHHCC--------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGG
T ss_pred EEEEEecCCeehhhccC--------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccc
Confidence 99999999999987631 12234578899999999999810
Q ss_pred ------------------------CCCeEecCCCCCCeeecCCCCeEEecccccee
Q 038671 559 ------------------------FPPIVHRDISSKNVLLDLENEAHVSDFGTAKF 590 (707)
Q Consensus 559 ------------------------~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~ 590 (707)
.+.++|||++|.||+++.++.+.|+||+.+..
T Consensus 158 ~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 158 WEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp GSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred ccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 02589999999999998655667999987753
No 407
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.26 E-value=8.8e-12 Score=129.01 Aligned_cols=131 Identities=20% Similarity=0.153 Sum_probs=63.8
Q ss_pred EEecCC-ccccCCccccCCCCcccEEEccC-CccCCCCCccccCcccCceEeeecccccccCchhhhhcccCCeeeecCc
Q 038671 199 LILNSN-QLCGQLSLELGSLTQLERLDLSS-NRLSNSIPKSLGNLVKLHYLNLSNNQFIKKIPVELEKLIHLSELDLSHN 276 (707)
Q Consensus 199 L~l~~n-~l~~~~~~~~~~l~~L~~L~l~~-n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 276 (707)
++++++ .++. +|. +..+++|+.|+|++ |.|+++.+..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 13 v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 344444 4442 333 55555555555553 5555444455555555555555555555555555555555555555555
Q ss_pred cCCCCCCcccccccccceEeccccccCCchh-HhhccCCCceeEeeccCcccccCCC
Q 038671 277 FLGEEMPSQICNMQSLEKLNLSHNNLSGFIP-SCFEELHGLSYIDISYNELHGSIPN 332 (707)
Q Consensus 277 ~l~~~~~~~~~~~~~L~~L~l~~n~i~~~~~-~~~~~~~~L~~l~l~~n~~~~~~~~ 332 (707)
.|++..+..|..++ |+.|+|.+|++..... ..+..+.......+..++++|..|.
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh
Confidence 55444444444333 5555565555553322 2222222222333444555555444
No 408
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.20 E-value=3.3e-11 Score=124.67 Aligned_cols=103 Identities=20% Similarity=0.176 Sum_probs=68.0
Q ss_pred eeeccCC-eeeecCCccccCCCCCCeEECCC-CccccccCcCccCCCCCcEEEcccCcCcccCCccccCCCCCCeeeccc
Q 038671 7 FLYLYNN-SFSGSIPSEIGRLKSLSDLELSG-NKLCGSIPHSLGNLTQITFLTLFDNALSGAIPKEYGNLVKLTLLTLEN 84 (707)
Q Consensus 7 ~L~l~~n-~i~~~~~~~~~~l~~L~~L~l~~-n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~ 84 (707)
.++++++ +++ .+|. |..+++|++|+|++ |+|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4566666 666 4566 77777777777774 777766556677777777777777777766666777777777777777
Q ss_pred ccccccCCCCCCCCCccEEEeccCccc
Q 038671 85 NQLRGPIPNLRNLTSLVRVRLNQNHLT 111 (707)
Q Consensus 85 n~i~~~~~~l~~l~~L~~L~l~~n~l~ 111 (707)
|+|+.+++......+|+.|+|.+|.+.
T Consensus 90 N~l~~~~~~~~~~~~L~~l~l~~N~~~ 116 (347)
T 2ifg_A 90 NALESLSWKTVQGLSLQELVLSGNPLH 116 (347)
T ss_dssp SCCSCCCSTTTCSCCCCEEECCSSCCC
T ss_pred CccceeCHHHcccCCceEEEeeCCCcc
Confidence 777666554332223666666666655
No 409
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.12 E-value=7.6e-11 Score=116.67 Aligned_cols=137 Identities=15% Similarity=0.136 Sum_probs=99.8
Q ss_pred CCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCc--eeeeeeeeecCCceeEEE
Q 038671 437 DFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRN--IVKFYGFCSHARHSFIVY 514 (707)
Q Consensus 437 ~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~~~~~lv~ 514 (707)
.+.+....+.|..+.||++...+|+.+++|+..... ...+..|+.+++.+++.+ ++++++++..++..++||
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~------~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~ 94 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA------LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLL 94 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCT------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEE
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCccc------chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEE
Confidence 444433334566799999988778889999975431 134677888888885433 567888888888899999
Q ss_pred eeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCC------------------------------------
Q 038671 515 EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDC------------------------------------ 558 (707)
Q Consensus 515 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------------------------------------ 558 (707)
||++|.++. ... . ....++.++++.++.||+..
T Consensus 95 e~i~G~~l~--~~~------~---~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (264)
T 1nd4_A 95 GEVPGQDLL--SSH------L---APAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ 163 (264)
T ss_dssp ECCSSEETT--TSC------C---CHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGT
T ss_pred EecCCcccC--cCc------C---CHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhcc
Confidence 999998884 211 1 12356777888888888752
Q ss_pred -------------------CCCeEecCCCCCCeeecCCCCeEEecccccee
Q 038671 559 -------------------FPPIVHRDISSKNVLLDLENEAHVSDFGTAKF 590 (707)
Q Consensus 559 -------------------~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~ 590 (707)
.+.++|||++|.||+++.++.+.|+|||.+..
T Consensus 164 ~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 164 GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp TCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred CccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 01399999999999998766677999998753
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=99.09 E-value=9.4e-11 Score=120.44 Aligned_cols=157 Identities=17% Similarity=0.183 Sum_probs=95.8
Q ss_pred hhhhCCCCCCEEeCCCCC-CCCCCChhhhCCCCCcEEEecCCccccCCccccC--CCCcccEEEccC--CccCCC-----
Q 038671 164 AEIIHSSQLKVLDLSSNH-IVGEMPSKLGKLSSLIKLILNSNQLCGQLSLELG--SLTQLERLDLSS--NRLSNS----- 233 (707)
Q Consensus 164 ~~~~~~~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~--~l~~L~~L~l~~--n~i~~~----- 233 (707)
..+..+++|+.|+|++|. + ..+. + .+++|++|.+..|.+.......+. .+|+|+.|+|+. |...+.
T Consensus 166 ~ll~~~P~L~~L~L~g~~~l--~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~ 241 (362)
T 2ra8_A 166 PVLDAMPLLNNLKIKGTNNL--SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNV 241 (362)
T ss_dssp HHHHTCTTCCEEEEECCBTC--BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGG
T ss_pred HHHhcCCCCcEEEEeCCCCc--eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHH
Confidence 445566777777776662 2 1222 2 267777777777777644333333 577788777753 221111
Q ss_pred CCccc--cCcccCceEeeecccccccCchhhh---hcccCCeeeecCccCCCCC----CcccccccccceEeccccccCC
Q 038671 234 IPKSL--GNLVKLHYLNLSNNQFIKKIPVELE---KLIHLSELDLSHNFLGEEM----PSQICNMQSLEKLNLSHNNLSG 304 (707)
Q Consensus 234 ~~~~l--~~l~~L~~L~l~~n~l~~~~~~~~~---~l~~L~~L~l~~n~l~~~~----~~~~~~~~~L~~L~l~~n~i~~ 304 (707)
+...+ ..+++|+.|+|++|.+.+.....+. .+++|+.|+|+.|.+++.. +..+..+++|+.|++++|.|++
T Consensus 242 l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 242 FRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp TGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred HHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 01122 2468888888888887654433333 4678888888888886632 3334567888888998888876
Q ss_pred chhHhhccCCCceeEeeccCc
Q 038671 305 FIPSCFEELHGLSYIDISYNE 325 (707)
Q Consensus 305 ~~~~~~~~~~~L~~l~l~~n~ 325 (707)
.....+...- ...+++++++
T Consensus 322 ~~~~~l~~al-g~~~~~~~~~ 341 (362)
T 2ra8_A 322 EMKKELQKSL-PMKIDVSDSQ 341 (362)
T ss_dssp HHHHHHHHHC-CSEEECCSBC
T ss_pred HHHHHHHHHc-CCEEEecCCc
Confidence 5555555411 3457777765
No 411
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.05 E-value=6e-10 Score=115.64 Aligned_cols=145 Identities=15% Similarity=0.262 Sum_probs=106.9
Q ss_pred CCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCC--CCceeeeeeeeecC---CceeEEE
Q 038671 440 DEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR--HRNIVKFYGFCSHA---RHSFIVY 514 (707)
Q Consensus 440 ~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~---~~~~lv~ 514 (707)
..+.++.|.++.+|+++..+ ..+++|+...+..........+.+|+.+++.+. +..+++++.++.+. +..++||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 45678999999999998764 578888875111111112346788999999886 45678889888766 5589999
Q ss_pred eeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCC------------------------------------
Q 038671 515 EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDC------------------------------------ 558 (707)
Q Consensus 515 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------------------------------------ 558 (707)
||++|..+.+.. ...++..++..++.+++++|+.||+..
T Consensus 121 e~v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 121 EFVSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp ECCCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred EecCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 999998774311 123677888899999999999999831
Q ss_pred -------------------CCCeEecCCCCCCeeecCCCC--eEEecccccee
Q 038671 559 -------------------FPPIVHRDISSKNVLLDLENE--AHVSDFGTAKF 590 (707)
Q Consensus 559 -------------------~~~ivH~dlk~~Nil~~~~~~--~kl~Dfg~~~~ 590 (707)
.+.++|||+++.||+++.++. +.|.||+.+..
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 137999999999999997753 68999999875
No 412
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=99.04 E-value=6.7e-11 Score=121.53 Aligned_cols=184 Identities=15% Similarity=0.095 Sum_probs=87.2
Q ss_pred ccCCCCCcEEEcccCcCc---------ccCCccccCCCCCCeeecccccccccCCCCCCCCCccEEEeccCccccccCcc
Q 038671 47 LGNLTQITFLTLFDNALS---------GAIPKEYGNLVKLTLLTLENNQLRGPIPNLRNLTSLVRVRLNQNHLTGNISES 117 (707)
Q Consensus 47 ~~~l~~L~~L~L~~n~i~---------~~~~~~~~~l~~L~~L~l~~n~i~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~ 117 (707)
..++++|+.|.+.++... ..+...+..+++|+.|+|++|.-..+++ + .+++|+.|+|..|.++......
T Consensus 135 ~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~l~~-~-~~~~L~~L~L~~~~l~~~~l~~ 212 (362)
T 2ra8_A 135 KEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLSIGK-K-PRPNLKSLEIISGGLPDSVVED 212 (362)
T ss_dssp HHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCBCCS-C-BCTTCSEEEEECSBCCHHHHHH
T ss_pred hhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCceecc-c-cCCCCcEEEEecCCCChHHHHH
Confidence 445566666666543221 0122344556666777666652111222 2 2566666666666655333333
Q ss_pred cc--CCCCCcEEEccc--ccccccCCCCCCCCCCCcEEEcCCCccCCCCchhh--hCCCCCCEEeCCCCCCCCCCChhhh
Q 038671 118 FG--IHPNLAFIDLSH--NYFYGEISSDWGRCPKLGTLDFSSNNITGSMPAEI--IHSSQLKVLDLSSNHIVGEMPSKLG 191 (707)
Q Consensus 118 ~~--~~~~L~~L~L~~--n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~ 191 (707)
+. .+|+|++|+|+. |...+. .. +.. ....+ ..+++|+.|+|.+|.+.+..+..+.
T Consensus 213 l~~~~lp~L~~L~L~~~~~~~~~~--~~----------------~~~-l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la 273 (362)
T 2ra8_A 213 ILGSDLPNLEKLVLYVGVEDYGFD--GD----------------MNV-FRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFL 273 (362)
T ss_dssp HHHSBCTTCCEEEEECBCGGGTCC--SC----------------GGG-TGGGSCTTTCTTCCEEEEESCTTHHHHHHHHH
T ss_pred HHHccCCCCcEEEEeccccccccc--hh----------------HHH-HHHHHhcCCCCCcCEEeCCCCCCchHHHHHHH
Confidence 32 456666666642 111000 00 000 00011 1245555555555555422222222
Q ss_pred ---CCCCCcEEEecCCccccCC----ccccCCCCcccEEEccCCccCCCCCccccC-cccCceEeeeccc
Q 038671 192 ---KLSSLIKLILNSNQLCGQL----SLELGSLTQLERLDLSSNRLSNSIPKSLGN-LVKLHYLNLSNNQ 253 (707)
Q Consensus 192 ---~l~~L~~L~l~~n~l~~~~----~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~-l~~L~~L~l~~n~ 253 (707)
.+++|++|+|+.|.++... +..+..+++|+.|+|++|.|++.....+.. + ...+++++++
T Consensus 274 ~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 274 ESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred hCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 3556666666666665432 222234567777777777766443333432 2 2456777765
No 413
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.94 E-value=1.3e-09 Score=110.17 Aligned_cols=185 Identities=21% Similarity=0.234 Sum_probs=123.3
Q ss_pred CceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCC-CCc--eeeeeeeeecCC---ceeEEE
Q 038671 441 EHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR-HRN--IVKFYGFCSHAR---HSFIVY 514 (707)
Q Consensus 441 ~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~n--iv~~~~~~~~~~---~~~lv~ 514 (707)
.+.++.|....||++. +.+++|+.... .....+.+|++.++.+. +.. +++++......+ ..|+||
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~-----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm 95 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS-----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGF 95 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH-----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc-----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEE
Confidence 4668999999999873 45889985421 24567889999998873 322 455555544333 458999
Q ss_pred eeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCC------------------------------------
Q 038671 515 EYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDC------------------------------------ 558 (707)
Q Consensus 515 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------------------------------------ 558 (707)
|+++|.++.+... ..++..++..++.++++.++.||+..
T Consensus 96 ~~i~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (304)
T 3sg8_A 96 TKIKGVPLTPLLL-----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQM 170 (304)
T ss_dssp ECCCCEECCHHHH-----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHH
T ss_pred cccCCeECCcccc-----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccH
Confidence 9999998875432 23667777888888888888888621
Q ss_pred -------------------CCCeEecCCCCCCeeecC--CCCeEEeccccceecCCCCCCccc--------------ccc
Q 038671 559 -------------------FPPIVHRDISSKNVLLDL--ENEAHVSDFGTAKFLKPDSSNWAE--------------LAG 603 (707)
Q Consensus 559 -------------------~~~ivH~dlk~~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~~~~--------------~~g 603 (707)
.+.++|||++|.||+++. ++.+.++||+.+....+..+.... ...
T Consensus 171 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~ 250 (304)
T 3sg8_A 171 KKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILN 250 (304)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHH
Confidence 135899999999999998 456789999998764322110000 000
Q ss_pred ccCCCC-ccccccCCCCccchhHHHHHHHHHHHhCCCCC
Q 038671 604 TYGYVA-PELAYTMKVTEKCDVYSFGVLALEVIKGKHPR 641 (707)
Q Consensus 604 ~~~y~a-PE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~ 641 (707)
.++... |+.... .....+.|++|.++|.+.+|+.+|
T Consensus 251 ~Y~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 251 HYKHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHTCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HcCCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 111111 221111 122368999999999999999886
No 414
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.69 E-value=9e-08 Score=97.27 Aligned_cols=138 Identities=15% Similarity=0.169 Sum_probs=102.1
Q ss_pred CCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCC----CceeeeeeeeecCCceeE
Q 038671 437 DFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH----RNIVKFYGFCSHARHSFI 512 (707)
Q Consensus 437 ~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~~~~~~~~~~~~~l 512 (707)
.....+.++.|....||++ |+.+++|+... ......+.+|.+++..+.+ ..+++++++ +..++
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~-----~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~l 104 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKR-----DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFN 104 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESS-----HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCc-----HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEE
Confidence 6677788999999999998 66788997532 1223558889988888865 234555555 56789
Q ss_pred EEeeeccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCC---------------------------------
Q 038671 513 VYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCF--------------------------------- 559 (707)
Q Consensus 513 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~--------------------------------- 559 (707)
||||++|.++..... ..++..+...++.++++.++.||+...
T Consensus 105 vme~i~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (320)
T 3r70_A 105 IMKYIKGERITYEQY-----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQ 179 (320)
T ss_dssp EEECCCCBCCCHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTT
T ss_pred EEeecCCcccccccc-----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcc
Confidence 999999998864321 235666677778888888888885421
Q ss_pred ---------------------------CCeEecCCCCCCeeecCCCCeEEeccccceecC
Q 038671 560 ---------------------------PPIVHRDISSKNVLLDLENEAHVSDFGTAKFLK 592 (707)
Q Consensus 560 ---------------------------~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~ 592 (707)
+.++|||++|.||+++.++.+.|+||+.+....
T Consensus 180 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~ 239 (320)
T 3r70_A 180 LLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGD 239 (320)
T ss_dssp CCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEEC
T ss_pred cccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCC
Confidence 235999999999999986667999999987643
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.62 E-value=8.2e-09 Score=95.55 Aligned_cols=13 Identities=15% Similarity=0.342 Sum_probs=5.6
Q ss_pred CCCCCcEEEcCCC
Q 038671 144 RCPKLGTLDFSSN 156 (707)
Q Consensus 144 ~~~~L~~L~L~~n 156 (707)
..++|++|+|++|
T Consensus 34 ~~~~L~~L~L~~n 46 (185)
T 1io0_A 34 NDPDLEEVNLNNI 46 (185)
T ss_dssp TCTTCCEEECTTC
T ss_pred cCCCCCEEEecCC
Confidence 3444444444444
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.61 E-value=1e-08 Score=94.95 Aligned_cols=62 Identities=16% Similarity=0.250 Sum_probs=29.6
Q ss_pred ccCCeeeecCccCCCC----CCcccccccccceEec--cccccCCch----hHhhccCCCceeEeeccCccc
Q 038671 266 IHLSELDLSHNFLGEE----MPSQICNMQSLEKLNL--SHNNLSGFI----PSCFEELHGLSYIDISYNELH 327 (707)
Q Consensus 266 ~~L~~L~l~~n~l~~~----~~~~~~~~~~L~~L~l--~~n~i~~~~----~~~~~~~~~L~~l~l~~n~~~ 327 (707)
++|++|+|++|.|++. +...+...+.|+.|++ ++|.|.+.. ...+...+.|++|++++|.+.
T Consensus 93 ~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 93 NTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp SSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred CCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 4455555555544332 1223334445555555 555555332 233334456666666666553
No 417
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.52 E-value=6.6e-07 Score=88.56 Aligned_cols=135 Identities=13% Similarity=0.145 Sum_probs=98.4
Q ss_pred eeeecCCe-eEEEEEcC-CCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCC-CCceeeeeeeeecCCceeEEEeeecc
Q 038671 443 CIGKGGQG-SVYKAELP-SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR-HRNIVKFYGFCSHARHSFIVYEYLEM 519 (707)
Q Consensus 443 ~lg~G~~g-~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~ 519 (707)
.+..|..+ .||+.... +++.+++|+... .....+.+|...++.+. +-.++++++++.+.+..++|||+++|
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~------~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G 104 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG------SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPG 104 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET------HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCS
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC------CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCC
Confidence 45556655 58988654 466789998532 23456788999988874 44478889999999999999999999
Q ss_pred CcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCC-----------------------------------------
Q 038671 520 GSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDC----------------------------------------- 558 (707)
Q Consensus 520 ~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~----------------------------------------- 558 (707)
.++.+..... ......++.++++.|+.||+..
T Consensus 105 ~~~~~~~~~~-------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (272)
T 4gkh_A 105 KTAFQVLEEY-------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVE 177 (272)
T ss_dssp EEHHHHHHHC-------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHH
T ss_pred ccccccccCC-------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHH
Confidence 9988765321 1233456667777777777531
Q ss_pred --------------CCCeEecCCCCCCeeecCCCCeEEecccccee
Q 038671 559 --------------FPPIVHRDISSKNVLLDLENEAHVSDFGTAKF 590 (707)
Q Consensus 559 --------------~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~ 590 (707)
.+.++|||+.+.||+++.++.+-|+||+.+..
T Consensus 178 ~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 178 QVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 02379999999999999777778999998864
No 418
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.43 E-value=1.5e-06 Score=87.48 Aligned_cols=137 Identities=16% Similarity=0.159 Sum_probs=95.2
Q ss_pred CceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCC---ceeeeeeeee-cCCceeEEEee
Q 038671 441 EHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHR---NIVKFYGFCS-HARHSFIVYEY 516 (707)
Q Consensus 441 ~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~-~~~~~~lv~e~ 516 (707)
.+.++.|....||+. |+.+++|+... ......+.+|++++..+.+. .+++.+.++. ..+..+++|||
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~-----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~ 94 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS-----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRK 94 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS-----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEEC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC-----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEec
Confidence 456888999999998 56688888421 12346788999999998642 3667777774 45678899999
Q ss_pred eccCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhC---------------------------------------
Q 038671 517 LEMGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHND--------------------------------------- 557 (707)
Q Consensus 517 ~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~--------------------------------------- 557 (707)
++|.++.+... ..++..+...++.++++.|+.||+.
T Consensus 95 i~G~~l~~~~~-----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~ 169 (306)
T 3tdw_A 95 VQGQILGEDGM-----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLR 169 (306)
T ss_dssp CCSEECHHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHH
T ss_pred cCCeECchhhh-----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhH
Confidence 99998876321 1133444444555555555555542
Q ss_pred ------------------CCCCeEecCCCCCCeeecC---CCCe-EEeccccceec
Q 038671 558 ------------------CFPPIVHRDISSKNVLLDL---ENEA-HVSDFGTAKFL 591 (707)
Q Consensus 558 ------------------~~~~ivH~dlk~~Nil~~~---~~~~-kl~Dfg~~~~~ 591 (707)
..+.++|||++|.||+++. ++.+ .|+||+.+...
T Consensus 170 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 170 DYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 1235799999999999987 4554 89999988753
No 419
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.33 E-value=2.3e-06 Score=84.97 Aligned_cols=78 Identities=18% Similarity=0.223 Sum_probs=60.3
Q ss_pred CCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCC---ceeeeeeeeecCCceeEEE
Q 038671 438 FDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHR---NIVKFYGFCSHARHSFIVY 514 (707)
Q Consensus 438 ~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~~~~~~~lv~ 514 (707)
....+.++.|.++.||+++..+|+.++||+...... .....+..|++.++.+++. .+++++++. ..++||
T Consensus 17 ~~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~---~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvm 89 (288)
T 3d1u_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAP---ALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAM 89 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCC---CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEE
T ss_pred ccceeeeCCcchhheEEEEeCCCCeEEEEecCCCCc---chhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEE
Confidence 344677999999999999888899999999643211 1235678999999999764 577888764 468999
Q ss_pred eeeccCcH
Q 038671 515 EYLEMGSL 522 (707)
Q Consensus 515 e~~~~~~L 522 (707)
||++|+++
T Consensus 90 e~l~g~~~ 97 (288)
T 3d1u_A 90 EWVDERPP 97 (288)
T ss_dssp ECCCCCCC
T ss_pred EecccCCC
Confidence 99998864
No 420
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.32 E-value=3.8e-06 Score=86.53 Aligned_cols=147 Identities=14% Similarity=0.209 Sum_probs=91.7
Q ss_pred CCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCC--ceeeeeeeeecC-CceeEE
Q 038671 437 DFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHR--NIVKFYGFCSHA-RHSFIV 513 (707)
Q Consensus 437 ~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~~~~~~~~~-~~~~lv 513 (707)
.....+.++.|....+|+.+. +|+.+++|+.... ..+..|+..+..+... .++++++++... +..|+|
T Consensus 42 ~~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~--------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv 112 (362)
T 3ovc_A 42 SVSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA--------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCI 112 (362)
T ss_dssp CCEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC--------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEE
T ss_pred CCceEEECCCCCcceEEEEEE-CCcEEEEEeCCch--------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEE
Confidence 334456789999999999975 5788999986432 2477888888888643 356777776654 678999
Q ss_pred EeeeccCcHHHH------------------HhcccccC---------C-----CChHHH---------------------
Q 038671 514 YEYLEMGSLAMI------------------LSNDAAAK---------D-----LGWTKR--------------------- 540 (707)
Q Consensus 514 ~e~~~~~~L~~~------------------l~~~~~~~---------~-----l~~~~~--------------------- 540 (707)
|||++|.++.+. ++...... + -+|...
T Consensus 113 ~e~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~ 192 (362)
T 3ovc_A 113 SRRAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVS 192 (362)
T ss_dssp EECCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTH
T ss_pred EEecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 999998766421 11110000 0 001101
Q ss_pred HHHHHHHHHHHHHHHhCC-CCCeEecCCCCCCeeecCCCCeEEeccccceecC
Q 038671 541 MNVIKGVVDALSYMHNDC-FPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLK 592 (707)
Q Consensus 541 ~~i~~~i~~~l~~LH~~~-~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~ 592 (707)
......+....+++...- .+.++|||+.+.||+++.++.+.|+||+.+..-.
T Consensus 193 ~~~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~gd 245 (362)
T 3ovc_A 193 ASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFGD 245 (362)
T ss_dssp HHHHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEEC
T ss_pred ccchHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccCC
Confidence 011112222223332210 1368999999999999877778899999987643
No 421
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.32 E-value=6.6e-08 Score=93.90 Aligned_cols=78 Identities=31% Similarity=0.329 Sum_probs=37.9
Q ss_pred cccCceEeeecccccccC--chhhhhcccCCeeeecCccCCCCCCccccccc--ccceEeccccccCCchh-------Hh
Q 038671 241 LVKLHYLNLSNNQFIKKI--PVELEKLIHLSELDLSHNFLGEEMPSQICNMQ--SLEKLNLSHNNLSGFIP-------SC 309 (707)
Q Consensus 241 l~~L~~L~l~~n~l~~~~--~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~--~L~~L~l~~n~i~~~~~-------~~ 309 (707)
+++|+.|+|++|+|++.. +..+..+++|+.|+|++|.|++. ..+..+. +|+.|+|++|++.+..| ..
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~i 246 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAI 246 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHH
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHH
Confidence 344444555554444421 23344555555555555555432 2223333 56666666666553222 23
Q ss_pred hccCCCceeEe
Q 038671 310 FEELHGLSYID 320 (707)
Q Consensus 310 ~~~~~~L~~l~ 320 (707)
+..+|+|+.||
T Consensus 247 l~~~P~L~~LD 257 (267)
T 3rw6_A 247 RERFPKLLRLD 257 (267)
T ss_dssp HHHCTTCCEES
T ss_pred HHHCcccCeEC
Confidence 55667776665
No 422
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.32 E-value=9.3e-08 Score=92.83 Aligned_cols=62 Identities=35% Similarity=0.439 Sum_probs=26.6
Q ss_pred CCcccEEEccCCccCCC--CCccccCcccCceEeeecccccccCchhhhhcc--cCCeeeecCccCCC
Q 038671 217 LTQLERLDLSSNRLSNS--IPKSLGNLVKLHYLNLSNNQFIKKIPVELEKLI--HLSELDLSHNFLGE 280 (707)
Q Consensus 217 l~~L~~L~l~~n~i~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~--~L~~L~l~~n~l~~ 280 (707)
+++|+.|+|++|+|+++ ++..+..+++|+.|+|++|+|.+. ..+..+. +|++|+|++|.+.+
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~ 234 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCD 234 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGG
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCcc
Confidence 44455555555544432 123333444455555555544433 1122222 44455555554443
No 423
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.28 E-value=3.1e-07 Score=82.45 Aligned_cols=83 Identities=12% Similarity=0.118 Sum_probs=45.0
Q ss_pred cccEEEccCCccCCCCCccccCcccCceEeeeccc-ccccCchhhhhc----ccCCeeeecCcc-CCCCCCccccccccc
Q 038671 219 QLERLDLSSNRLSNSIPKSLGNLVKLHYLNLSNNQ-FIKKIPVELEKL----IHLSELDLSHNF-LGEEMPSQICNMQSL 292 (707)
Q Consensus 219 ~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~-l~~~~~~~~~~l----~~L~~L~l~~n~-l~~~~~~~~~~~~~L 292 (707)
+|+.||++++.|++.....+.++++|+.|+|++|. |++.....+..+ ++|++|+|++|. ||+.....+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45555555555555444455555666666666653 544444444442 356666666653 555444445555666
Q ss_pred ceEeccccc
Q 038671 293 EKLNLSHNN 301 (707)
Q Consensus 293 ~~L~l~~n~ 301 (707)
+.|++++++
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 666666653
No 424
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.25 E-value=4.7e-07 Score=81.28 Aligned_cols=87 Identities=14% Similarity=0.100 Sum_probs=61.4
Q ss_pred CCCcEEEecCCccccCCccccCCCCcccEEEccCCc-cCCCCCccccCc----ccCceEeeeccc-ccccCchhhhhccc
Q 038671 194 SSLIKLILNSNQLCGQLSLELGSLTQLERLDLSSNR-LSNSIPKSLGNL----VKLHYLNLSNNQ-FIKKIPVELEKLIH 267 (707)
Q Consensus 194 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~-i~~~~~~~l~~l----~~L~~L~l~~n~-l~~~~~~~~~~l~~ 267 (707)
..|++|++++|.++......+..+++|+.|+|++|. |++..-..++.+ ++|++|+|++|. |++.....+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 467777777777776666666777788888888774 665544555553 468888888874 77766677777888
Q ss_pred CCeeeecCcc-CCC
Q 038671 268 LSELDLSHNF-LGE 280 (707)
Q Consensus 268 L~~L~l~~n~-l~~ 280 (707)
|++|++++|. +++
T Consensus 141 L~~L~L~~c~~Itd 154 (176)
T 3e4g_A 141 LKYLFLSDLPGVKE 154 (176)
T ss_dssp CCEEEEESCTTCCC
T ss_pred CCEEECCCCCCCCc
Confidence 8888888875 543
No 425
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.12 E-value=1.9e-06 Score=89.08 Aligned_cols=82 Identities=5% Similarity=0.006 Sum_probs=53.5
Q ss_pred cee-eecCCeeEEEEEcC-------CCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCC-C--CceeeeeeeeecC---
Q 038671 442 HCI-GKGGQGSVYKAELP-------SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR-H--RNIVKFYGFCSHA--- 507 (707)
Q Consensus 442 ~~l-g~G~~g~vy~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h--~niv~~~~~~~~~--- 507 (707)
+.| +.|....+|+.+.. +++.+++|+..............+.+|+.+++.+. + -.+++++.++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 556 78888999998654 26778999864321000001134567778777774 2 3577788877655
Q ss_pred CceeEEEeeeccCcHH
Q 038671 508 RHSFIVYEYLEMGSLA 523 (707)
Q Consensus 508 ~~~~lv~e~~~~~~L~ 523 (707)
+..++||||++|.++.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 4578999999987654
No 426
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.01 E-value=2e-05 Score=82.55 Aligned_cols=78 Identities=14% Similarity=0.045 Sum_probs=49.0
Q ss_pred CceeeecCCeeEEEEEcC-CCcEEEEEecCCCCC--ch--hhhHHHHHHHHHHHhcCCC--C-ceeeeeeeeecCCceeE
Q 038671 441 EHCIGKGGQGSVYKAELP-SGEIVAVKKFHSPLP--SE--MASQQEFLNEVKTLTGIRH--R-NIVKFYGFCSHARHSFI 512 (707)
Q Consensus 441 ~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~--~~--~~~~~~~~~e~~~l~~l~h--~-niv~~~~~~~~~~~~~l 512 (707)
.+.+|.|..+.||+++.. +++.+++|....... .. .....++..|.+.++.+.. | .+++++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 467999999999999654 468899998653211 00 0122346678888877632 3 45566654 3445689
Q ss_pred EEeeeccC
Q 038671 513 VYEYLEMG 520 (707)
Q Consensus 513 v~e~~~~~ 520 (707)
|||++++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 427
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.99 E-value=3.1e-05 Score=79.34 Aligned_cols=148 Identities=20% Similarity=0.316 Sum_probs=82.0
Q ss_pred hcCCCC----CceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCC--CCceeeeee------
Q 038671 435 TNDFDD----EHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR--HRNIVKFYG------ 502 (707)
Q Consensus 435 ~~~~~~----~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~~~~------ 502 (707)
...|.+ .+.++.|..+.+|++...+| .+++|+.... ...+..|..++..+. .-.+++++.
T Consensus 27 ~~~~~~~~~~~~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~-------~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~ 98 (346)
T 2q83_A 27 LQGWDVQAEKIDVIQGNQMALVWKVHTDSG-AVCLKRIHRP-------EKKALFSIFAQDYLAKKGMNVPGILPNKKGSL 98 (346)
T ss_dssp GGGSCCCCCEEEECC----CEEEEEEETTE-EEEEEEECSC-------HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCS
T ss_pred HHHcCCceEEeeeccccccCcEEEEEeCCC-CEEEEecCCC-------HHHHHHHHHHHHHHHHcCCCCCceeecCCCCE
Confidence 355553 23455677899999977655 4899988642 122334444444442 113344443
Q ss_pred eeecCCceeEEEeeeccCcHH--------------HHHhcccc----c-------CCCChHHH-----------------
Q 038671 503 FCSHARHSFIVYEYLEMGSLA--------------MILSNDAA----A-------KDLGWTKR----------------- 540 (707)
Q Consensus 503 ~~~~~~~~~lv~e~~~~~~L~--------------~~l~~~~~----~-------~~l~~~~~----------------- 540 (707)
+....+..+++|||++|.++. ..+|.... . ....|...
T Consensus 99 ~~~~~~~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 178 (346)
T 2q83_A 99 YSKHGSFLFVVYDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEA 178 (346)
T ss_dssp CEEETTEEEEEEECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCEEEEEEEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHh
Confidence 123456789999999986542 01121110 0 00122211
Q ss_pred --------------HHHHHHHHHHHHHHHh----------CCCCCeEecCCCCCCeeecCCCCeEEecccccee
Q 038671 541 --------------MNVIKGVVDALSYMHN----------DCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKF 590 (707)
Q Consensus 541 --------------~~i~~~i~~~l~~LH~----------~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~ 590 (707)
..+..++.+++++|+. ...+.++|||+++.||+++.++.+.++||+.+..
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 179 EKEDPFSQLYLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred ccCCcHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 1111234445666653 0123899999999999998888999999998854
No 428
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.85 E-value=7.4e-05 Score=74.69 Aligned_cols=76 Identities=20% Similarity=0.225 Sum_probs=60.1
Q ss_pred CCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCC---CCceeeeeeeeecCCceeEEEee
Q 038671 440 DEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR---HRNIVKFYGFCSHARHSFIVYEY 516 (707)
Q Consensus 440 ~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~ 516 (707)
..+.++.|....+|+.+. +++.+++|+... .....+..|+..++.+. ...++++++++...+..++||||
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~------~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~ 112 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINER------SYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEA 112 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEG------GGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEEC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCc------ccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEe
Confidence 346789999999999986 467788998642 13466888988888883 36788899988888889999999
Q ss_pred eccCcH
Q 038671 517 LEMGSL 522 (707)
Q Consensus 517 ~~~~~L 522 (707)
++|..+
T Consensus 113 l~G~~~ 118 (312)
T 3jr1_A 113 LNKSKN 118 (312)
T ss_dssp CCCCCC
T ss_pred ccCCCC
Confidence 998764
No 429
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.85 E-value=3e-06 Score=77.62 Aligned_cols=86 Identities=14% Similarity=0.133 Sum_probs=37.2
Q ss_pred CCCCCCeeecccccccc-----cCCCCCCCCCccEEEeccCccccccC----ccccCCCCCcEEEcccc---cccc----
Q 038671 73 NLVKLTLLTLENNQLRG-----PIPNLRNLTSLVRVRLNQNHLTGNIS----ESFGIHPNLAFIDLSHN---YFYG---- 136 (707)
Q Consensus 73 ~l~~L~~L~l~~n~i~~-----~~~~l~~l~~L~~L~l~~n~l~~~~~----~~~~~~~~L~~L~L~~n---~i~~---- 136 (707)
....|+.|+|++|+|.+ +...+...+.|++|+|+.|.|+.... +++...+.|++|+|++| .+..
T Consensus 68 ~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~ 147 (197)
T 1pgv_A 68 NSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEM 147 (197)
T ss_dssp TCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHH
T ss_pred hCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHH
Confidence 33444444444444442 11123334445555555555543222 22333444555555543 2221
Q ss_pred cCCCCCCCCCCCcEEEcCCCcc
Q 038671 137 EISSDWGRCPKLGTLDFSSNNI 158 (707)
Q Consensus 137 ~~~~~~~~~~~L~~L~L~~n~i 158 (707)
....++...++|+.|+++.|.+
T Consensus 148 ~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 148 DMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHHhCCCcCeEeccCCCc
Confidence 1122344455666666655543
No 430
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.80 E-value=7.6e-06 Score=74.90 Aligned_cols=10 Identities=10% Similarity=0.341 Sum_probs=4.2
Q ss_pred CCCcEEEcCC
Q 038671 146 PKLGTLDFSS 155 (707)
Q Consensus 146 ~~L~~L~L~~ 155 (707)
+.|++|+|++
T Consensus 41 ~~L~~L~L~~ 50 (197)
T 1pgv_A 41 TDLKEVNINN 50 (197)
T ss_dssp SSCCEEECTT
T ss_pred CCccEEECCC
Confidence 3444444443
No 431
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.72 E-value=0.0002 Score=75.44 Aligned_cols=75 Identities=12% Similarity=0.097 Sum_probs=46.3
Q ss_pred CeEecCCCCCCeeecCCCCeEEeccccceecCCCCCCcccccc--ccCCCCccccccC---CCCccchhHHHHHHHHHHH
Q 038671 561 PIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNWAELAG--TYGYVAPELAYTM---KVTEKCDVYSFGVLALEVI 635 (707)
Q Consensus 561 ~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g--~~~y~aPE~~~~~---~~~~~~Dv~slG~~l~el~ 635 (707)
.++|||++|.||+++.++ ++++||+.+....+..+. ..... ...|++|+..... ......++......+|+.+
T Consensus 233 ~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dl-a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 310 (420)
T 2pyw_A 233 ALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDI-GAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNLF 310 (420)
T ss_dssp EEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHH-HHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHHH
T ss_pred eEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHH-HHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHHH
Confidence 899999999999998776 999999998763322111 11111 1235555544311 1122345567777777777
Q ss_pred hC
Q 038671 636 KG 637 (707)
Q Consensus 636 tg 637 (707)
++
T Consensus 311 ~~ 312 (420)
T 2pyw_A 311 NK 312 (420)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 432
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.59 E-value=0.00046 Score=68.46 Aligned_cols=80 Identities=16% Similarity=0.221 Sum_probs=56.6
Q ss_pred cCCCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCC-C--CceeeeeeeeecCCceeE
Q 038671 436 NDFDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR-H--RNIVKFYGFCSHARHSFI 512 (707)
Q Consensus 436 ~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h--~niv~~~~~~~~~~~~~l 512 (707)
.+....+.+|.|..+.||+.+..+|+.|++|+....... ....+..|+..|+.+. . -.+++++++. ..++
T Consensus 15 ~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~---~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~l 87 (288)
T 3f7w_A 15 REVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPA---LDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTL 87 (288)
T ss_dssp CCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCC---CTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEE
T ss_pred CCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcc---hhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceE
Confidence 345556789999999999999999999999986543221 2245778888888774 2 2345555542 3478
Q ss_pred EEeeeccCcH
Q 038671 513 VYEYLEMGSL 522 (707)
Q Consensus 513 v~e~~~~~~L 522 (707)
||||++++..
T Consensus 88 v~e~l~~~~~ 97 (288)
T 3f7w_A 88 AMEWVDERPP 97 (288)
T ss_dssp EEECCCCCCC
T ss_pred EEEeecccCC
Confidence 9999986643
No 433
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.54 E-value=7.9e-05 Score=63.74 Aligned_cols=62 Identities=19% Similarity=0.238 Sum_probs=45.8
Q ss_pred CeeeecCccCC-CCCCcccccccccceEeccccccCCchhHhhccCCCceeEeeccCcccccCCC
Q 038671 269 SELDLSHNFLG-EEMPSQICNMQSLEKLNLSHNNLSGFIPSCFEELHGLSYIDISYNELHGSIPN 332 (707)
Q Consensus 269 ~~L~l~~n~l~-~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~l~l~~n~~~~~~~~ 332 (707)
..++.+++.++ ..+|..+. ++|+.|+|++|+|+.+.+..|..+++|+.|+|++|+|.|.+..
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~l 73 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCRL 73 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGGG
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCcc
Confidence 36777777774 14554332 3688888888888877777888888888899999999887753
No 434
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.45 E-value=0.00049 Score=69.97 Aligned_cols=143 Identities=17% Similarity=0.140 Sum_probs=73.2
Q ss_pred ceeeecCCee-EEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCC-C-CceeeeeeeeecCCceeEEEeeec
Q 038671 442 HCIGKGGQGS-VYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR-H-RNIVKFYGFCSHARHSFIVYEYLE 518 (707)
Q Consensus 442 ~~lg~G~~g~-vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h-~niv~~~~~~~~~~~~~lv~e~~~ 518 (707)
+.++.|.... +|+....+|+.+++|....... ..+..|+.++..+. + -.+++++.+....+ +++||++.
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~------~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~ 95 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG------GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLG 95 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT------CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCC
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC------ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCC
Confidence 3465555444 6787765467788886543211 12334555555553 2 23566776644333 68999998
Q ss_pred cCcHHHHHhcccc---------------------c--CCCChHHHH-------H-H------------HHHHHHHHHHHH
Q 038671 519 MGSLAMILSNDAA---------------------A--KDLGWTKRM-------N-V------------IKGVVDALSYMH 555 (707)
Q Consensus 519 ~~~L~~~l~~~~~---------------------~--~~l~~~~~~-------~-i------------~~~i~~~l~~LH 555 (707)
+..+.+++..... . ..++..... . + ...+.+.++.+.
T Consensus 96 ~~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~ 175 (333)
T 3csv_A 96 DALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQIL 175 (333)
T ss_dssp SCBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred CcchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 7776544421110 0 011111100 0 0 011112222221
Q ss_pred h---CCCCCeEecCCCCCCeeecCC----CCeEEeccccceecC
Q 038671 556 N---DCFPPIVHRDISSKNVLLDLE----NEAHVSDFGTAKFLK 592 (707)
Q Consensus 556 ~---~~~~~ivH~dlk~~Nil~~~~----~~~kl~Dfg~~~~~~ 592 (707)
. ...+.++|||+.+.||+++.+ +.+.|+||+.+....
T Consensus 176 ~~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~ 219 (333)
T 3csv_A 176 SAQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGH 219 (333)
T ss_dssp HHHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEEC
T ss_pred HhcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCC
Confidence 1 112379999999999999875 679999999987643
No 435
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.35 E-value=0.0015 Score=65.90 Aligned_cols=159 Identities=13% Similarity=0.148 Sum_probs=87.4
Q ss_pred chHHHHHHHhcCCCCC-----ceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCC--cee
Q 038671 426 IVYEEIIRVTNDFDDE-----HCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHR--NIV 498 (707)
Q Consensus 426 ~~~~~~~~~~~~~~~~-----~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~--niv 498 (707)
++.+++..+..+|.+. +.++.|....+|++...+| .+++|+..... ..+.+..|+.++..+... .++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~-----~~~~l~~e~~~l~~L~~~g~~vP 80 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV-----EKNDLPFFLGLMQHLAAKGLSCP 80 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC--------CCHHHHHHHHHHHHHHTTCCCC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC-----CHHHHHHHHHHHHHHHHCCCCCC
Confidence 3456666666677763 3466688889999977656 58899876521 112344566666655311 134
Q ss_pred eeeee------eecCCceeEEEeeeccCcHHH--------------HHhcccc--cCC----C---ChHHHHH-------
Q 038671 499 KFYGF------CSHARHSFIVYEYLEMGSLAM--------------ILSNDAA--AKD----L---GWTKRMN------- 542 (707)
Q Consensus 499 ~~~~~------~~~~~~~~lv~e~~~~~~L~~--------------~l~~~~~--~~~----l---~~~~~~~------- 542 (707)
+++.. ....+..+++++|++|..+.. .+|.... ..+ . .|.....
T Consensus 81 ~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 160 (322)
T 2ppq_A 81 LPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERAD 160 (322)
T ss_dssp CBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGG
T ss_pred cccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHH
Confidence 44422 123456789999999865311 0111100 000 0 1211100
Q ss_pred -----HHHHHHHHHHHHHhC----CCCCeEecCCCCCCeeecCCCCeEEecccccee
Q 038671 543 -----VIKGVVDALSYMHND----CFPPIVHRDISSKNVLLDLENEAHVSDFGTAKF 590 (707)
Q Consensus 543 -----i~~~i~~~l~~LH~~----~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~ 590 (707)
+...+.+.+++++.. ..++++|+|+.+.||+++.++.+.++||+.+..
T Consensus 161 ~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 161 EVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp GTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 011234445555532 123799999999999998776668999998754
No 436
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.28 E-value=0.0026 Score=64.37 Aligned_cols=142 Identities=13% Similarity=0.156 Sum_probs=80.6
Q ss_pred ceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCC--Cceeeeeee-----eecCCceeEEE
Q 038671 442 HCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRH--RNIVKFYGF-----CSHARHSFIVY 514 (707)
Q Consensus 442 ~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~-----~~~~~~~~lv~ 514 (707)
..++ |....+|++...+|+.+++|+...... ....+..|..++..+.. -.+++++.. ....+..+++|
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~----~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~ 106 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPERW----TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVF 106 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTTS----CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEE
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCCC----CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEE
Confidence 3466 888899999777787899999864321 23455667777776632 124445443 12245668899
Q ss_pred eeeccCcHH-----H------H---Hhcccc----c--CCCChHHH----HH---------------HHHHHHHHHHHHH
Q 038671 515 EYLEMGSLA-----M------I---LSNDAA----A--KDLGWTKR----MN---------------VIKGVVDALSYMH 555 (707)
Q Consensus 515 e~~~~~~L~-----~------~---l~~~~~----~--~~l~~~~~----~~---------------i~~~i~~~l~~LH 555 (707)
|+++|..+. . . +|.... . ...++... .. +...+.+.++.+.
T Consensus 107 ~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 186 (328)
T 1zyl_A 107 PSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVT 186 (328)
T ss_dssp ECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHH
T ss_pred EecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHH
Confidence 999886532 1 0 111100 0 01111110 00 0111112223332
Q ss_pred hC----CCCCeEecCCCCCCeeecCCCCeEEecccccee
Q 038671 556 ND----CFPPIVHRDISSKNVLLDLENEAHVSDFGTAKF 590 (707)
Q Consensus 556 ~~----~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~ 590 (707)
.. ..+.++|||+++.||+++ + .+.++||+.+..
T Consensus 187 ~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 187 AHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp HHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 21 123689999999999998 4 899999998864
No 437
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.18 E-value=0.00081 Score=70.71 Aligned_cols=73 Identities=19% Similarity=0.240 Sum_probs=49.1
Q ss_pred CceeeecCCeeEEEEEcCC--------CcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCC-CCceeeeeeeeecCCcee
Q 038671 441 EHCIGKGGQGSVYKAELPS--------GEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR-HRNIVKFYGFCSHARHSF 511 (707)
Q Consensus 441 ~~~lg~G~~g~vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~ 511 (707)
.+.|+.|....+|++..++ ++.+++|+..... . .+.+..|..+++.+. +.-.+++++.+.+ .
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~-~----~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g 148 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE-T----ESHLVAESVIFTLLSERHLGPKLYGIFSG----G 148 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC-C----HHHHHHHHHHHHHHHHTTSSSCEEEEETT----E
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC-c----HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----C
Confidence 4568888899999997653 5789999974321 1 133457888888774 3333667766543 2
Q ss_pred EEEeeeccCcH
Q 038671 512 IVYEYLEMGSL 522 (707)
Q Consensus 512 lv~e~~~~~~L 522 (707)
+|+||++|.++
T Consensus 149 ~v~e~l~G~~l 159 (429)
T 1nw1_A 149 RLEEYIPSRPL 159 (429)
T ss_dssp EEECCCCEEEC
T ss_pred EEEEEeCCccc
Confidence 89999987544
No 438
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.16 E-value=0.00081 Score=67.18 Aligned_cols=142 Identities=13% Similarity=0.049 Sum_probs=76.3
Q ss_pred CCCCceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCC-CCceeeeeeeeecCCceeEEEee
Q 038671 438 FDDEHCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR-HRNIVKFYGFCSHARHSFIVYEY 516 (707)
Q Consensus 438 ~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~ 516 (707)
+.-.+.++.|....+|++ +.+++|+........ ....+|+..++.+. +.-.++++++. .+.-++++||
T Consensus 20 ~~~i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~----~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~ 88 (301)
T 3dxq_A 20 YTGPLERLGGLTNLVFRA-----GDLCLRIPGKGTEEY----INRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRY 88 (301)
T ss_dssp CCSCEEEESCSSEEEEEE-----TTEEEEEECC----C----CCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEEC
T ss_pred ccceeEcCCcccccccee-----eeEEEECCCCCccce----eCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEee
Confidence 444788999999999999 458889875421111 11234666666553 22125666554 3334689999
Q ss_pred e-ccCcHHHH------------------Hhccccc--CCCCh-HHHHHHHH--------------HHHHHH----HHHHh
Q 038671 517 L-EMGSLAMI------------------LSNDAAA--KDLGW-TKRMNVIK--------------GVVDAL----SYMHN 556 (707)
Q Consensus 517 ~-~~~~L~~~------------------l~~~~~~--~~l~~-~~~~~i~~--------------~i~~~l----~~LH~ 556 (707)
+ +|.++... +|..... ...+. .....+.. .+.+.+ +.+..
T Consensus 89 i~~g~~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 168 (301)
T 3dxq_A 89 IAGAQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAA 168 (301)
T ss_dssp CTTCEECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHS
T ss_pred cCCCccCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHh
Confidence 9 66555321 1111110 00111 11111110 011111 11111
Q ss_pred -CCCCCeEecCCCCCCeeecCCCCeEEeccccceec
Q 038671 557 -DCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFL 591 (707)
Q Consensus 557 -~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~ 591 (707)
...+.++|+|+.+.||+ ..++.+.++||..+...
T Consensus 169 ~~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~g 203 (301)
T 3dxq_A 169 HPLPLAACHCDPLCENFL-DTGERMWIVDWEYSGMN 203 (301)
T ss_dssp SCCCCEEECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred cCCCceeeccCCCcCCEE-ECCCCEEEEecccccCC
Confidence 11235899999999999 56778899999988753
No 439
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.07 E-value=0.0022 Score=65.79 Aligned_cols=142 Identities=15% Similarity=0.211 Sum_probs=83.8
Q ss_pred CceeeecCCeeEEEEEcC--------CCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCC-CCceeeeeeeeecCCcee
Q 038671 441 EHCIGKGGQGSVYKAELP--------SGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR-HRNIVKFYGFCSHARHSF 511 (707)
Q Consensus 441 ~~~lg~G~~g~vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~ 511 (707)
.+.+..|-...+|++..+ +++.+++|+..... .....+.+|.++++.+. +.-.+++++++.+ .
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~----~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g 126 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL----QGVDSLVLESVMFAILAERSLGPQLYGVFPE----G 126 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----E
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc----chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----c
Confidence 356777888999999765 35789999864321 12344568888888774 3334677776654 2
Q ss_pred EEEeeeccCcHHHH-----------------Hhccc--ccCCCC--hHHHHHHHHHHHH-------------------HH
Q 038671 512 IVYEYLEMGSLAMI-----------------LSNDA--AAKDLG--WTKRMNVIKGVVD-------------------AL 551 (707)
Q Consensus 512 lv~e~~~~~~L~~~-----------------l~~~~--~~~~l~--~~~~~~i~~~i~~-------------------~l 551 (707)
+||||++|.++..- +|... ..++.. +.++.++..++.. .+
T Consensus 127 ~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~ 206 (379)
T 3feg_A 127 RLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEM 206 (379)
T ss_dssp EEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHH
T ss_pred cEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHH
Confidence 89999998765310 12111 112222 3445555544322 12
Q ss_pred HHH----HhC-CCCCeEecCCCCCCeeecCC----CCeEEecccccee
Q 038671 552 SYM----HND-CFPPIVHRDISSKNVLLDLE----NEAHVSDFGTAKF 590 (707)
Q Consensus 552 ~~L----H~~-~~~~ivH~dlk~~Nil~~~~----~~~kl~Dfg~~~~ 590 (707)
++| ... ....++|+|+.+.||+++.+ +.+.++||.++..
T Consensus 207 ~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 207 GNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 333 221 12368999999999999876 7899999998864
No 440
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=97.07 E-value=0.0026 Score=58.31 Aligned_cols=104 Identities=18% Similarity=0.135 Sum_probs=68.3
Q ss_pred cCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccceecCCCCCCc
Q 038671 519 MGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKFLKPDSSNW 598 (707)
Q Consensus 519 ~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 598 (707)
.-+|.+.+... ..++++.++|.++.|.+.+|.-.-.... . ..+=+.|..|++..+|.|.+.+ +.+.
T Consensus 32 ~vSL~eIL~~~--~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~--------- 97 (229)
T 2yle_A 32 ALSLEEILRLY--NQPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD--------- 97 (229)
T ss_dssp EEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C------------
T ss_pred cccHHHHHHHc--CCCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc---------
Confidence 35888998643 5689999999999999999888732111 1 1333457899999999998764 1110
Q ss_pred cccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCC
Q 038671 599 AELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 640 (707)
Q Consensus 599 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p 640 (707)
.....+.|||... ...+.+.=|||||+++|..+--..|
T Consensus 98 ---~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 ---AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ---ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1123466888753 3456778899999999999975555
No 441
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=97.02 E-value=0.0023 Score=67.60 Aligned_cols=74 Identities=16% Similarity=0.081 Sum_probs=46.8
Q ss_pred CceeeecCCeeEEEEEcCC-CcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCc-eeeeeeeeecCCceeEEEeeec
Q 038671 441 EHCIGKGGQGSVYKAELPS-GEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRN-IVKFYGFCSHARHSFIVYEYLE 518 (707)
Q Consensus 441 ~~~lg~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~e~~~ 518 (707)
.+.|+.|....+|++...+ ++.+++|+........ . ...+|..++..+...+ .+++++++. . .+|+||++
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-i---dR~~E~~vl~~L~~~gl~P~ll~~~~-~---G~v~e~I~ 184 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-I---NREREKKISCILYNKNIAKKIYVFFT-N---GRIEEFMD 184 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-S---CHHHHHHHHHHHTTSSSBCCEEEEET-T---EEEEECCC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-c---CHHHHHHHHHHHHhcCCCCCEEEEeC-C---eEEEEeeC
Confidence 3568888899999997765 5788999875422111 0 1146788888775333 366777763 2 25999998
Q ss_pred cCcH
Q 038671 519 MGSL 522 (707)
Q Consensus 519 ~~~L 522 (707)
|.++
T Consensus 185 G~~l 188 (458)
T 2qg7_A 185 GYAL 188 (458)
T ss_dssp SEEC
T ss_pred CccC
Confidence 7655
No 442
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.70 E-value=0.0024 Score=54.46 Aligned_cols=37 Identities=30% Similarity=0.248 Sum_probs=20.5
Q ss_pred CCcEEEcccCcCcccCCccccCCCCCCeeeccccccc
Q 038671 52 QITFLTLFDNALSGAIPKEYGNLVKLTLLTLENNQLR 88 (707)
Q Consensus 52 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~ 88 (707)
+|++|+|++|+|+.+.++.|..+++|++|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4555555555555555555555555555555555543
No 443
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.51 E-value=0.0055 Score=63.08 Aligned_cols=146 Identities=16% Similarity=0.212 Sum_probs=84.9
Q ss_pred CceeeecCCeeEEEEEcCC--------CcEEEEEecCCCCCc---------hhh------hHHHHHHHHHHHhcCC-CCc
Q 038671 441 EHCIGKGGQGSVYKAELPS--------GEIVAVKKFHSPLPS---------EMA------SQQEFLNEVKTLTGIR-HRN 496 (707)
Q Consensus 441 ~~~lg~G~~g~vy~~~~~~--------~~~vavK~~~~~~~~---------~~~------~~~~~~~e~~~l~~l~-h~n 496 (707)
.+.+..|-...+|++..++ ++.|.+++....... ... ..+.+..|..+++.+. +.-
T Consensus 57 v~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi 136 (401)
T 3f2s_A 57 ISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSL 136 (401)
T ss_dssp EEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTS
T ss_pred EEEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCC
Confidence 3557778888999997754 367899987542110 000 0122345888888774 444
Q ss_pred eeeeeeeeecCCceeEEEeeeccCcHHH--H---------------Hhccc--ccCCCC--hHHHHHHHHHHH-------
Q 038671 497 IVKFYGFCSHARHSFIVYEYLEMGSLAM--I---------------LSNDA--AAKDLG--WTKRMNVIKGVV------- 548 (707)
Q Consensus 497 iv~~~~~~~~~~~~~lv~e~~~~~~L~~--~---------------l~~~~--~~~~l~--~~~~~~i~~~i~------- 548 (707)
.+++++++..+ +|+||++|.+|.. + +|... ..+... +..+.++..++.
T Consensus 137 ~Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~ 212 (401)
T 3f2s_A 137 GPKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEE 212 (401)
T ss_dssp SCCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSH
T ss_pred CCeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcch
Confidence 66777776532 8999999766521 0 11111 111222 223333433321
Q ss_pred ---------------HHH----HHHHhC-CCCCeEecCCCCCCeeecCC------CCeEEecccccee
Q 038671 549 ---------------DAL----SYMHND-CFPPIVHRDISSKNVLLDLE------NEAHVSDFGTAKF 590 (707)
Q Consensus 549 ---------------~~l----~~LH~~-~~~~ivH~dlk~~Nil~~~~------~~~kl~Dfg~~~~ 590 (707)
.-+ ++|... ....++|+|+.+.||+++.+ +.+.++||.++..
T Consensus 213 ~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 213 SRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 112 223222 12368999999999999877 7899999998864
No 444
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.46 E-value=0.0034 Score=64.65 Aligned_cols=74 Identities=12% Similarity=0.096 Sum_probs=42.9
Q ss_pred CceeeecCCeeEEEEEcCC---------CcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCC-CCceeeeeeeeecCCce
Q 038671 441 EHCIGKGGQGSVYKAELPS---------GEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR-HRNIVKFYGFCSHARHS 510 (707)
Q Consensus 441 ~~~lg~G~~g~vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~ 510 (707)
.+.++.|....+|++...+ ++.+++|+...... . ......|.++++.+. +.-++++++.. . -
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~---~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~ 109 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-E---LYNTISEFEVYKTMSKYKIAPQLLNTF--N--G 109 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-G---TSCHHHHHHHHHHHHHTTSSCCEEEEE--T--T
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-c---eecHHHHHHHHHHHHhcCCCCceEEec--C--C
Confidence 3567788888999997653 26889998754211 1 112346777777664 22245666544 2 3
Q ss_pred eEEEeeeccCcH
Q 038671 511 FIVYEYLEMGSL 522 (707)
Q Consensus 511 ~lv~e~~~~~~L 522 (707)
++||||++|.++
T Consensus 110 ~~v~e~i~G~~l 121 (369)
T 3c5i_A 110 GRIEEWLYGDPL 121 (369)
T ss_dssp EEEEECCCSEEC
T ss_pred cEEEEEecCCcC
Confidence 689999987643
No 445
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.37 E-value=0.016 Score=58.76 Aligned_cols=32 Identities=25% Similarity=0.348 Sum_probs=28.3
Q ss_pred CCeEecCCCCCCeeecCCCCeEEeccccceec
Q 038671 560 PPIVHRDISSKNVLLDLENEAHVSDFGTAKFL 591 (707)
Q Consensus 560 ~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~~ 591 (707)
..++|+|+.+.||+++.++.+.++||+.+...
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 37999999999999998889999999888653
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.12 E-value=0.073 Score=55.28 Aligned_cols=141 Identities=9% Similarity=0.092 Sum_probs=82.4
Q ss_pred CceeeecCCeeEEEEEcCC--------CcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCC-CCceeeeeeeeecCCcee
Q 038671 441 EHCIGKGGQGSVYKAELPS--------GEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIR-HRNIVKFYGFCSHARHSF 511 (707)
Q Consensus 441 ~~~lg~G~~g~vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~ 511 (707)
.+.+..|-...+|++...+ ++.+++|+.......- -...+|.++++.+. +.-.+++++.+. -+
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~----idR~~E~~~l~~L~~~gi~P~l~~~~~----~~ 146 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKF----YDSKVELDVFRYLSNINIAPNIIADFP----EG 146 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CC----CCHHHHHHHHHHHHHTTSSCCEEEEET----TE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchh----cCHHHHHHHHHHHHhcCCCCCEEEEcC----CC
Confidence 3567778889999997653 5789999865432111 11245677776663 333456665432 26
Q ss_pred EEEeeeccCcHHH-----------H------Hhcccc----------cCCCChHHHHHHHHHH-----------------
Q 038671 512 IVYEYLEMGSLAM-----------I------LSNDAA----------AKDLGWTKRMNVIKGV----------------- 547 (707)
Q Consensus 512 lv~e~~~~~~L~~-----------~------l~~~~~----------~~~l~~~~~~~i~~~i----------------- 547 (707)
+|+||++|.++.. . +|.... ..+.-+.++.++..++
T Consensus 147 ~I~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~ 226 (424)
T 3mes_A 147 RIEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYS 226 (424)
T ss_dssp EEEECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHH
T ss_pred EEEEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHH
Confidence 8999999876421 0 111111 1111234444443322
Q ss_pred --HHHHHHHHh---------------------CCCCCeEecCCCCCCeeecCCCCeEEecccccee
Q 038671 548 --VDALSYMHN---------------------DCFPPIVHRDISSKNVLLDLENEAHVSDFGTAKF 590 (707)
Q Consensus 548 --~~~l~~LH~---------------------~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~~ 590 (707)
...+++|.+ .....++|+|+.+.||+ +.++.+.++||.++..
T Consensus 227 ~l~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 227 KILEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 122333321 11136899999999999 7788999999998864
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.41 E-value=0.11 Score=53.99 Aligned_cols=30 Identities=23% Similarity=0.411 Sum_probs=25.4
Q ss_pred CeEecCCCCCCeee------cCCCCeEEecccccee
Q 038671 561 PIVHRDISSKNVLL------DLENEAHVSDFGTAKF 590 (707)
Q Consensus 561 ~ivH~dlk~~Nil~------~~~~~~kl~Dfg~~~~ 590 (707)
.++|+|+.+.||++ ++++.++++||.+|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 35799999999999 4466799999999865
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=93.19 E-value=0.18 Score=46.24 Aligned_cols=115 Identities=9% Similarity=0.096 Sum_probs=80.9
Q ss_pred CCCceeeeeeeeecCCceeEEEeeec-cCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCC
Q 038671 493 RHRNIVKFYGFCSHARHSFIVYEYLE-MGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISSKN 571 (707)
Q Consensus 493 ~h~niv~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~N 571 (707)
.||+++.. .+-.+.+.+.+.++.-+ +-++.. -+..+...+++++.+|+....++++. +|--+.|+|
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-------ik~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~N 109 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-------IKSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDE 109 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-------GGGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-------HHhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecce
Confidence 58888766 45555566655565433 223322 23478899999999999999888777 899999999
Q ss_pred eeecCCCCeEEeccccceecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCC
Q 038671 572 VLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRD 642 (707)
Q Consensus 572 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~ 642 (707)
++++.++.+++.-.|....+. |. ..+...=.-.+=+++..+++|+..|+
T Consensus 110 L~f~~~~~p~i~~RGik~~l~-----------------P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNVVD-----------------PL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EEECTTSCEEESCCEETTTBS-----------------CC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEEcCCCCEEEEEccCccCCC-----------------CC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999998877654322 22 12222233456788899999999986
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=90.75 E-value=0.64 Score=42.78 Aligned_cols=114 Identities=12% Similarity=0.099 Sum_probs=78.6
Q ss_pred CCCceeeeeeeeecCCceeEEEeeec-cCcHHHHHhcccccCCCChHHHHHHHHHHHHHHH-HHHhCCCCCeEecCCCCC
Q 038671 493 RHRNIVKFYGFCSHARHSFIVYEYLE-MGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALS-YMHNDCFPPIVHRDISSK 570 (707)
Q Consensus 493 ~h~niv~~~~~~~~~~~~~lv~e~~~-~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~-~LH~~~~~~ivH~dlk~~ 570 (707)
.||++ --.+-.+++.+.+.++.-+ +-+.... +.++...+++++.+|+.... ++++. +|--+.|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i-------~~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI-------RKTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH-------HTSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH-------HhcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCc
Confidence 57888 3333356666666666543 3344433 23788999999999999888 77766 89999999
Q ss_pred CeeecCCCCeEEeccccceecCCCCCCccccccccCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCC
Q 038671 571 NVLLDLENEAHVSDFGTAKFLKPDSSNWAELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRD 642 (707)
Q Consensus 571 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~ 642 (707)
|++++.++.+++.-.|.-..+ +|.. .+...=.-.+=+++..++.++..|+
T Consensus 114 NL~f~~~~~p~i~hRGi~~~l-----------------pP~e-----~~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVKESL-----------------PPDE-----WDDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp GEEECTTCCEEESCCEETTTB-----------------SSCS-----CCHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred eEEEeCCCcEEEEEcCCcccC-----------------CCCC-----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999999887765432 3322 1111123356678888888988875
No 450
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=84.73 E-value=1.5 Score=34.71 Aligned_cols=47 Identities=15% Similarity=0.130 Sum_probs=28.0
Q ss_pred CccccccCccccCCCCCcEEEcccccccccCCCCCCCCCCCcEEEcCC
Q 038671 108 NHLTGNISESFGIHPNLAFIDLSHNYFYGEISSDWGRCPKLGTLDFSS 155 (707)
Q Consensus 108 n~l~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~L~~ 155 (707)
..++.+...+|.++.+|+.+.|-.+ ++.+...+|.+|.+|+.+.+..
T Consensus 6 ~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 6 EPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred CccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 3455556666666666666666654 3345556666666666666654
No 451
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=79.51 E-value=3.7 Score=32.45 Aligned_cols=48 Identities=15% Similarity=0.060 Sum_probs=34.5
Q ss_pred ccccccCCCCCCCCCCCcEEEcCCCccCCCCchhhhCCCCCCEEeCCCC
Q 038671 132 NYFYGEISSDWGRCPKLGTLDFSSNNITGSMPAEIIHSSQLKVLDLSSN 180 (707)
Q Consensus 132 n~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~~~~L~~L~l~~n 180 (707)
..++.+...+|.+|.+|+.+.|..+ ++.+...+|.++.+|+.+.+...
T Consensus 6 ~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 6 EPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred CccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 3456677778888888888888765 45567777777777777777654
No 452
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=67.70 E-value=0.64 Score=48.93 Aligned_cols=62 Identities=6% Similarity=-0.095 Sum_probs=17.2
Q ss_pred CCCceeeecCCeeEEEEEcCC-CcEEEE------EecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeeee
Q 038671 439 DDEHCIGKGGQGSVYKAELPS-GEIVAV------KKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGFC 504 (707)
Q Consensus 439 ~~~~~lg~G~~g~vy~~~~~~-~~~vav------K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~ 504 (707)
.+.+.+| ||.||+|.+.. ..+||| |....... .......+.+|..+++.++|||+++.+++.
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~-~~e~~~~~~rea~l~~~~~H~niv~~h~f~ 213 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGV-SEKRLTSLVRRATLKENEQIPKYEKIHNFK 213 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC------------------------------------CBCCCEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccc-cccccccccccccccccccccccCCCcceE
Confidence 3456676 99999997653 357888 66543221 122345678899999999999999988765
No 453
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=56.03 E-value=1.1 Score=29.10 Aligned_cols=27 Identities=26% Similarity=0.516 Sum_probs=11.6
Q ss_pred EeecchhhHHH-HHHhhheeeEEEecCC
Q 038671 377 IVFPLLGSFAL-LISLIGLFFMFRRSSS 403 (707)
Q Consensus 377 i~~~~~~~~~~-~~~~~~~~~~~rr~~~ 403 (707)
|+..+++++++ +++++++++++||++.
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhHh
Confidence 44455554443 3333333444444433
No 454
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=54.59 E-value=0.92 Score=29.29 Aligned_cols=27 Identities=11% Similarity=0.285 Sum_probs=11.6
Q ss_pred EeecchhhHHHHHHhhheeeEEEecCC
Q 038671 377 IVFPLLGSFALLISLIGLFFMFRRSSS 403 (707)
Q Consensus 377 i~~~~~~~~~~~~~~~~~~~~~rr~~~ 403 (707)
|++.++++++++++.+.++++.||++.
T Consensus 14 Ia~~vVGvll~vi~~l~~~~~~RRR~~ 40 (44)
T 2jwa_A 14 IISAVVGILLVVVLGVVFGILIKRRQQ 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred hHHHHHHHHHHHHHHHHHHhheehhhh
Confidence 344445544344444444444444443
No 455
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=51.71 E-value=1.2 Score=28.83 Aligned_cols=27 Identities=26% Similarity=0.349 Sum_probs=11.4
Q ss_pred EeecchhhHHHH-HHhhheeeEEEecCC
Q 038671 377 IVFPLLGSFALL-ISLIGLFFMFRRSSS 403 (707)
Q Consensus 377 i~~~~~~~~~~~-~~~~~~~~~~rr~~~ 403 (707)
|+..++++++++ ++...+++++||++.
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RRRr~ 39 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRRKSI 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhhhhh
Confidence 444555544443 333333444444433
No 456
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=37.60 E-value=4e+02 Score=28.50 Aligned_cols=46 Identities=20% Similarity=0.177 Sum_probs=33.5
Q ss_pred hHHHHHHHHHHH--HHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccce
Q 038671 537 WTKRMNVIKGVV--DALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAK 589 (707)
Q Consensus 537 ~~~~~~i~~~i~--~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~ 589 (707)
+..+..++.+.| ..+.|+=.. ||=.++|||++.+|++.=+|||.+-
T Consensus 454 ~~a~~nF~~S~A~ySvv~YILGi-------gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYILGV-------GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTC-------CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHHHhHhheeeec-------cCCCCcceeEcCCCCEeeeehHHhh
Confidence 445556666544 346666544 4667899999999999999999884
No 457
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=37.07 E-value=1e+02 Score=30.10 Aligned_cols=136 Identities=14% Similarity=0.138 Sum_probs=73.8
Q ss_pred ceeeecCCeeEEEEEcCCCcEEEEEecCCCCCchhhhHHHHHHHHHHHhcCCCCceeeeeee--------------e---
Q 038671 442 HCIGKGGQGSVYKAELPSGEIVAVKKFHSPLPSEMASQQEFLNEVKTLTGIRHRNIVKFYGF--------------C--- 504 (707)
Q Consensus 442 ~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~--------------~--- 504 (707)
+....|. +-||.+.. ++..|+||-.. ....+.+..++...-.+..|+..-+.-. .
T Consensus 75 ~~s~~Gs-tgvff~~t-d~~~~VVK~s~------~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~ 146 (342)
T 1cja_A 75 ERSEKGT-EGLFFVET-ESGVFIVKRST------NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSF 146 (342)
T ss_dssp EECCSTT-SCEEEEEE-SSCEEEEECCT------THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSS
T ss_pred EeccCCC-CCeEEEEe-CCCEEEEeCcH------HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhh
Confidence 3344455 45555544 57789999531 1234556666666666777764332211 0
Q ss_pred -----ecCCceeEEEeeeccCcHHHHHhcccccCCCChHHHHHHHHHH--HHHHHHHHhCCCC-CeE-ecCCCCCCeeec
Q 038671 505 -----SHARHSFIVYEYLEMGSLAMILSNDAAAKDLGWTKRMNVIKGV--VDALSYMHNDCFP-PIV-HRDISSKNVLLD 575 (707)
Q Consensus 505 -----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~~i--~~~l~~LH~~~~~-~iv-H~dlk~~Nil~~ 575 (707)
...+..+++|||.+|..|.+.-... ..+.+.... +.++ +-+++.+.....+ +.+ +.--.+.|||++
T Consensus 147 ~~l~~l~~~~~~l~meyv~G~~L~e~~~~~-~~~~f~~~~----~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~ 221 (342)
T 1cja_A 147 RVITTLANQANILLMELVRGITLNKLTTTS-APEVLTKST----MQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLS 221 (342)
T ss_dssp CHHHHHTTCSEEEEEECCCEEESTTCCSSS-HHHHSCHHH----HHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEE
T ss_pred HHHHHhhcccceehhhhcCCCccccchhhh-hhhhcCHHH----HHhhchhheehhhhcCCccCcccccCCCChhheEEe
Confidence 0122466999999987776442211 011132222 2332 3345666655332 111 123578999998
Q ss_pred CCCC-eEEecccccee
Q 038671 576 LENE-AHVSDFGTAKF 590 (707)
Q Consensus 576 ~~~~-~kl~Dfg~~~~ 590 (707)
+++. +.++|-+.+..
T Consensus 222 ~~n~~~~~IDhn~af~ 237 (342)
T 1cja_A 222 ERGATVVPIDSKIIPL 237 (342)
T ss_dssp SBTTCEEECSCCCCCC
T ss_pred CCCCeEEEEcCCcccc
Confidence 7554 88899988854
No 458
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=34.62 E-value=4.9e+02 Score=28.40 Aligned_cols=44 Identities=23% Similarity=0.235 Sum_probs=32.1
Q ss_pred HHHHHHHHHH--HHHHHHHhCCCCCeEecCCCCCCeeecCCCCeEEeccccce
Q 038671 539 KRMNVIKGVV--DALSYMHNDCFPPIVHRDISSKNVLLDLENEAHVSDFGTAK 589 (707)
Q Consensus 539 ~~~~i~~~i~--~~l~~LH~~~~~~ivH~dlk~~Nil~~~~~~~kl~Dfg~~~ 589 (707)
.+..++.++| ..+.|+=.. ||=.++||||+.+|++.-+|||.+-
T Consensus 530 ar~nF~~SlA~~Svv~YILGl-------GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 530 VMDTYIKSCAGYCVITYLLGV-------GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHTC-------CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHccC-------CCCCCcceEEeCCCCEEEEeehhhh
Confidence 4455555543 335555544 5778999999999999999999874
No 459
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=31.19 E-value=5.5 Score=25.35 Aligned_cols=12 Identities=17% Similarity=0.141 Sum_probs=4.8
Q ss_pred eecchhhHHHHH
Q 038671 378 VFPLLGSFALLI 389 (707)
Q Consensus 378 ~~~~~~~~~~~~ 389 (707)
+..+++++++++
T Consensus 16 ~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 16 IGGVAVGVVLLL 27 (41)
T ss_dssp HHHHHHHHHHHH
T ss_pred EeehhHHHHHHH
Confidence 333344444433
No 460
>3eps_A Isocitrate dehydrogenase kinase/phosphatase; ATP-binding, glyoxylate bypass, nucleotide-binding, protein phosphatase; HET: AMP ATP; 2.80A {Escherichia coli O157} PDB: 3lcb_A* 3lc6_A*
Probab=26.29 E-value=5.8e+02 Score=26.70 Aligned_cols=138 Identities=16% Similarity=0.150 Sum_probs=94.6
Q ss_pred eeeecCCeeEEEE-EcCCCcEEEEEecCCCCCc-hhhhHHHHHHHHHHHhcCCCCceeeeeeee----------------
Q 038671 443 CIGKGGQGSVYKA-ELPSGEIVAVKKFHSPLPS-EMASQQEFLNEVKTLTGIRHRNIVKFYGFC---------------- 504 (707)
Q Consensus 443 ~lg~G~~g~vy~~-~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~---------------- 504 (707)
.+.-|--|.|-.+ +.+ +-.++.|+++..... .....+.++...+..++ |..+=++-+..
T Consensus 313 i~APGikGmVM~VFTLP-Sf~~VFKvIKD~F~p~K~~tr~~Vk~KY~LVK~--hDRVGRMADT~Efsn~~fp~~Rfs~eL 389 (578)
T 3eps_A 313 IEAPGIRGMVMLVFTLP-GFDRVFKVIKDKFAPQKEMSAAHVRACYQLVKE--HDRVGRMADTQEFENFVLEKRHISPAL 389 (578)
T ss_dssp EECSSCCCSSEEEEECT-TCSEEEEEECSSCCTTCCCCHHHHHHHHHHHHT--SCCTTTBCCCEEEEEEEEEGGGBCHHH
T ss_pred EECCCCCceEEEEEcCC-CCceEEEEEccCCCCccccCHHHHHHHHHHHHh--hhhhhhhhhhhhhhcccCchhhCCHHH
Confidence 4778999999999 555 566899999765322 22334556666665553 44444332211
Q ss_pred -------------ecCCceeEEEeeec--cCcHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCC
Q 038671 505 -------------SHARHSFIVYEYLE--MGSLAMILSNDAAAKDLGWTKRMNVIKGVVDALSYMHNDCFPPIVHRDISS 569 (707)
Q Consensus 505 -------------~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~ 569 (707)
.+++.+.|-.=|++ ..+|.-++++ -+..++...+.+--.|++.|-.. +|.-||.-.
T Consensus 390 L~EL~~~~ps~le~~gd~liIkHlYiERRMtPLNLYL~~------a~~~~~~~av~eYG~AIKqLAaA---NIFPGDML~ 460 (578)
T 3eps_A 390 MELLLQEAAEKITDLGEQIVIRHLYIERRMVPLNIWLEQ------VEGQQLRDAIEEYGNAIRQLAAA---NIFPGDMLF 460 (578)
T ss_dssp HHHHHHHSGGGEEEETTEEEEEEEEEEECCEEHHHHHHH------CCTHHHHHHHHHHHHHHHHHHHT---TEECSCCCG
T ss_pred HHHHHHhCCccEEEcCCeeEeeeeeeeccccchhHHHhh------CCHHHHHHHHHHHHHHHHHHHHh---cCCCccccc
Confidence 12333332222332 4567767743 24567888889999999999999 999999999
Q ss_pred CCeeecCCCCeEEeccccceecC
Q 038671 570 KNVLLDLENEAHVSDFGTAKFLK 592 (707)
Q Consensus 570 ~Nil~~~~~~~kl~Dfg~~~~~~ 592 (707)
.|+=|+..|+|..-|++-...+.
T Consensus 461 KNFGVTRhgRVVFYDYDEI~ylT 483 (578)
T 3eps_A 461 KNFGVTRHGRVVFYDYDEICYMT 483 (578)
T ss_dssp GGEEECTTCCEEECCGGGCEEST
T ss_pred ccCCccccceEEEecccceeeec
Confidence 99999999999999998776654
No 461
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=26.11 E-value=3.9 Score=24.87 Aligned_cols=24 Identities=21% Similarity=0.462 Sum_probs=9.6
Q ss_pred EeecchhhHHHHHHhhheeeEEEe
Q 038671 377 IVFPLLGSFALLISLIGLFFMFRR 400 (707)
Q Consensus 377 i~~~~~~~~~~~~~~~~~~~~~rr 400 (707)
|++.+++.+.++++...++++.||
T Consensus 10 IaagVvglll~vii~l~~~~~iRR 33 (35)
T 1iij_A 10 IIATVVGVLLFLILVVVVGILIKR 33 (35)
T ss_dssp HHHHHHHHHHHHHHTTTTTHHHHH
T ss_pred eHHHHHHHHHHHHHHHHhheEEee
Confidence 344445533333333333333333
Done!